locus-tag class description AWH56_000005 PF00480 ROK family AWH56_000010 PF08402 TOBE domain AWH56_000010 PF00005 ABC transporter AWH56_000030 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_000035 PF05343 M42 glutamyl aminopeptidase AWH56_000045 PF01694 Rhomboid family AWH56_000060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AWH56_000060 PF00056 lactate/malate dehydrogenase, NAD binding domain AWH56_000065 PF00899 ThiF family AWH56_000070 PF01812 5-formyltetrahydrofolate cyclo-ligase family AWH56_000075 PF00471 Ribosomal protein L33 AWH56_000085 PF00483 Nucleotidyl transferase AWH56_000090 PF09210 Domain of unknown function (DUF1957) AWH56_000090 PF03065 Glycosyl hydrolase family 57 AWH56_000115 PF03717 Penicillin-binding Protein dimerisation domain AWH56_000115 PF00905 Penicillin binding protein transpeptidase domain AWH56_000120 PF07690 Major Facilitator Superfamily AWH56_000125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AWH56_000125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AWH56_000130 PF02673 Bacitracin resistance protein BacA AWH56_000160 PF01895 PhoU domain AWH56_000165 PF06691 Protein of unknown function (DUF1189) AWH56_000175 PF06207 Protein of unknown function (DUF1002) AWH56_000180 PF07690 Major Facilitator Superfamily AWH56_000190 PF04551 GcpE protein AWH56_000205 PF01475 Ferric uptake regulator family AWH56_000210 PF00950 ABC 3 transport family AWH56_000215 PF00005 ABC transporter AWH56_000225 PF13089 Polyphosphate kinase N-terminal domain AWH56_000225 PF02503 Polyphosphate kinase middle domain AWH56_000225 PF17941 Polyphosphate kinase C-terminal domain 1 AWH56_000225 PF13090 Polyphosphate kinase C-terminal domain 2 AWH56_000230 PF00950 ABC 3 transport family AWH56_000235 PF00005 ABC transporter AWH56_000245 PF01261 Xylose isomerase-like TIM barrel AWH56_000250 PF00270 DEAD/DEAH box helicase AWH56_000250 PF00271 Helicase conserved C-terminal domain AWH56_000260 PF02559 CarD-like/TRCF domain AWH56_000265 PF02401 LytB protein AWH56_000270 PF01784 NIF3 (NGG1p interacting factor 3) AWH56_000275 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AWH56_000290 PF04542 Sigma-70 region 2 AWH56_000290 PF00140 Sigma-70 factor, region 1.2 AWH56_000290 PF04539 Sigma-70 region 3 AWH56_000290 PF03979 Sigma-70 factor, region 1.1 AWH56_000290 PF04545 Sigma-70, region 4 AWH56_000295 PF10410 DnaB-helicase binding domain of primase AWH56_000295 PF08275 DNA primase catalytic core, N-terminal domain AWH56_000295 PF01807 CHC2 zinc finger AWH56_000300 PF03618 Kinase/pyrophosphorylase AWH56_000305 PF08279 HTH domain AWH56_000305 PF00571 CBS domain AWH56_000310 PF02565 Recombination protein O C terminal AWH56_000310 PF11967 Recombination protein O N terminal AWH56_000315 PF14006 YqzL-like protein AWH56_000320 PF01926 50S ribosome-binding GTPase AWH56_000320 PF07650 KH domain AWH56_000325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AWH56_000335 PF01219 Prokaryotic diacylglycerol kinase AWH56_000340 PF02130 Uncharacterized protein family UPF0054 AWH56_000345 PF07698 7TM receptor with intracellular HD hydrolase AWH56_000345 PF01966 HD domain AWH56_000345 PF07697 7TM-HD extracellular AWH56_000350 PF02562 PhoH-like protein AWH56_000355 PF06898 Putative stage IV sporulation protein YqfD AWH56_000360 PF07873 YabP family AWH56_000370 PF12127 SigmaW regulon antibacterial AWH56_000375 PF01957 NfeD-like C-terminal, partner-binding AWH56_000375 PF01972 Serine dehydrogenase proteinase AWH56_000380 PF09424 Yqey-like protein AWH56_000385 PF01165 Ribosomal protein S21 AWH56_000390 PF02690 Na+/Pi-cotransporter AWH56_000395 PF01791 DeoC/LacD family aldolase AWH56_000400 PF04055 Radical SAM superfamily AWH56_000400 PF01938 TRAM domain AWH56_000400 PF00919 Uncharacterized protein family UPF0004 AWH56_000405 PF04452 RNA methyltransferase AWH56_000415 PF00684 DnaJ central domain AWH56_000415 PF01556 DnaJ C terminal domain AWH56_000415 PF00226 DnaJ domain AWH56_000420 PF00012 Hsp70 protein AWH56_000425 PF01025 GrpE AWH56_000430 PF01628 HrcA protein C terminal domain AWH56_000430 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AWH56_000435 PF04055 Radical SAM superfamily AWH56_000435 PF06969 HemN C-terminal domain AWH56_000440 PF00679 Elongation factor G C-terminus AWH56_000440 PF14492 Elongation Factor G, domain II AWH56_000440 PF00009 Elongation factor Tu GTP binding domain AWH56_000440 PF03144 Elongation factor Tu domain 2 AWH56_000440 PF06421 GTP-binding protein LepA C-terminus AWH56_000445 PF12438 Protein of unknown function (DUF3679) AWH56_000450 PF07454 Stage II sporulation protein P (SpoIIP) AWH56_000455 PF03418 Germination protease AWH56_000460 PF01649 Ribosomal protein S20 AWH56_000465 PF06144 DNA polymerase III, delta subunit AWH56_000470 PF14141 YqzM-like protein AWH56_000475 PF00753 Metallo-beta-lactamase superfamily AWH56_000475 PF13567 Domain of unknown function (DUF4131) AWH56_000475 PF03772 Competence protein AWH56_000480 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AWH56_000485 PF01053 Cys/Met metabolism PLP-dependent enzyme AWH56_000490 PF10531 SLBB domain AWH56_000500 PF14748 Pyrroline-5-carboxylate reductase dimerisation AWH56_000500 PF03807 NADP oxidoreductase coenzyme F420-dependent AWH56_000505 PF13649 Methyltransferase domain AWH56_000510 PF17783 CvfB-like winged helix domain AWH56_000510 PF13509 S1 domain AWH56_000520 PF01966 HD domain AWH56_000525 PF01467 Cytidylyltransferase-like AWH56_000530 PF01985 CRS1 / YhbY (CRM) domain AWH56_000535 PF08501 Shikimate dehydrogenase substrate binding domain AWH56_000535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AWH56_000535 PF01488 Shikimate / quinate 5-dehydrogenase AWH56_000540 PF01926 50S ribosome-binding GTPase AWH56_000545 PF08970 Sporulation inhibitor A AWH56_000555 PF00361 Proton-conducting membrane transporter AWH56_000555 PF13244 Domain of unknown function (DUF4040) AWH56_000555 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AWH56_000560 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AWH56_000565 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AWH56_000570 PF00361 Proton-conducting membrane transporter AWH56_000575 PF01899 Na+/H+ ion antiporter subunit AWH56_000580 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AWH56_000585 PF03334 Na+/H+ antiporter subunit AWH56_000590 PF13649 Methyltransferase domain AWH56_000595 PF13183 4Fe-4S dicluster domain AWH56_000595 PF02754 Cysteine-rich domain AWH56_000600 PF02913 FAD linked oxidases, C-terminal domain AWH56_000600 PF01565 FAD binding domain AWH56_000605 PF17853 GGDEF-like domain AWH56_000605 PF05651 Putative sugar diacid recognition AWH56_000605 PF13556 PucR C-terminal helix-turn-helix domain AWH56_000610 PF02666 Phosphatidylserine decarboxylase AWH56_000615 PF01066 CDP-alcohol phosphatidyltransferase AWH56_000625 PF12627 Probable RNA and SrmB- binding site of polymerase A AWH56_000625 PF00571 CBS domain AWH56_000625 PF01368 DHH family AWH56_000625 PF02272 DHHA1 domain AWH56_000625 PF01743 Poly A polymerase head domain AWH56_000640 PF03358 NADPH-dependent FMN reductase AWH56_000645 PF01047 MarR family AWH56_000650 PF04542 Sigma-70 region 2 AWH56_000650 PF04545 Sigma-70, region 4 AWH56_000670 PF11953 Domain of unknown function (DUF3470) AWH56_000670 PF12838 4Fe-4S dicluster domain AWH56_000700 PF00990 Diguanylate cyclase, GGDEF domain AWH56_000700 PF00563 EAL domain AWH56_000700 PF03707 Bacterial signalling protein N terminal repeat AWH56_000710 PF17934 Tetracyclin repressor-like, C-terminal domain AWH56_000710 PF00440 Bacterial regulatory proteins, tetR family AWH56_000715 PF01144 Coenzyme A transferase AWH56_000720 PF01144 Coenzyme A transferase AWH56_000725 PF01039 Carboxyl transferase domain AWH56_000730 PF00378 Enoyl-CoA hydratase/isomerase AWH56_000735 PF00682 HMGL-like AWH56_000740 PF00364 Biotin-requiring enzyme AWH56_000745 PF02785 Biotin carboxylase C-terminal domain AWH56_000745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AWH56_000745 PF00289 Biotin carboxylase, N-terminal domain AWH56_000750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AWH56_000750 PF02770 Acyl-CoA dehydrogenase, middle domain AWH56_000750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AWH56_000765 PF01048 Phosphorylase superfamily AWH56_000780 PF00571 CBS domain AWH56_000780 PF01769 Divalent cation transporter AWH56_000780 PF03448 MgtE intracellular N domain AWH56_000790 PF00128 Alpha amylase, catalytic domain AWH56_000790 PF16657 Maltogenic Amylase, C-terminal domain AWH56_000795 PF00381 PTS HPr component phosphorylation site AWH56_000805 PF00474 Sodium:solute symporter family AWH56_000815 PF14143 YrhC-like protein AWH56_000820 PF01048 Phosphorylase superfamily AWH56_000830 PF03717 Penicillin-binding Protein dimerisation domain AWH56_000830 PF00905 Penicillin binding protein transpeptidase domain AWH56_000835 PF01272 Transcription elongation factor, GreA/GreB, C-term AWH56_000835 PF03449 Transcription elongation factor, N-terminal AWH56_000840 PF00485 Phosphoribulokinase / Uridine kinase family AWH56_000845 PF16325 Peptidase family U32 C-terminal domain AWH56_000845 PF01136 Peptidase family U32 AWH56_000850 PF01136 Peptidase family U32 AWH56_000860 PF01596 O-methyltransferase AWH56_000865 PF02618 YceG-like family AWH56_000870 PF06949 Protein of unknown function (DUF1292) AWH56_000875 PF03652 Holliday junction resolvase AWH56_000880 PF06135 IreB regulatory phosphoprotein AWH56_000885 PF02272 DHHA1 domain AWH56_000885 PF01411 tRNA synthetases class II (A) AWH56_000885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AWH56_000890 PF01594 AI-2E family transporter AWH56_000910 PF14490 Helix-hairpin-helix containing domain AWH56_000910 PF13538 UvrD-like helicase C-terminal domain AWH56_000910 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AWH56_000925 PF00266 Aminotransferase class-V AWH56_000930 PF02082 Transcriptional regulator AWH56_000940 PF16193 AAA C-terminal domain AWH56_000940 PF12002 MgsA AAA+ ATPase C terminal AWH56_000940 PF05496 Holliday junction DNA helicase RuvB P-loop domain AWH56_000950 PF02589 LUD domain AWH56_000955 PF11870 Domain of unknown function (DUF3390) AWH56_000955 PF13183 4Fe-4S dicluster domain AWH56_000955 PF02589 LUD domain AWH56_000960 PF02754 Cysteine-rich domain AWH56_000965 PF02652 L-lactate permease AWH56_000970 PF00899 ThiF family AWH56_000980 PF01842 ACT domain AWH56_000980 PF00742 Homoserine dehydrogenase AWH56_000980 PF03447 Homoserine dehydrogenase, NAD binding domain AWH56_000985 PF01336 OB-fold nucleic acid binding domain AWH56_000985 PF00152 tRNA synthetases class II (D, K and N) AWH56_000985 PF02938 GAD domain AWH56_000990 PF13393 Histidyl-tRNA synthetase AWH56_000990 PF03129 Anticodon binding domain AWH56_001010 PF02580 D-Tyr-tRNA(Tyr) deacylase AWH56_001015 PF02824 TGS domain AWH56_001015 PF04607 Region found in RelA / SpoT proteins AWH56_001015 PF13291 ACT domain AWH56_001020 PF00156 Phosphoribosyl transferase domain AWH56_001025 PF02272 DHHA1 domain AWH56_001025 PF01368 DHH family AWH56_001025 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AWH56_001025 PF17768 RecJ OB domain AWH56_001030 PF06305 Lipopolysaccharide assembly protein A domain AWH56_001035 PF01545 Cation efflux family AWH56_001035 PF16916 Dimerisation domain of Zinc Transporter AWH56_001040 PF07549 SecD/SecF GG Motif AWH56_001040 PF02355 Protein export membrane protein AWH56_001045 PF07549 SecD/SecF GG Motif AWH56_001045 PF02355 Protein export membrane protein AWH56_001060 PF01943 Polysaccharide biosynthesis protein AWH56_001060 PF14667 Polysaccharide biosynthesis C-terminal domain AWH56_001070 PF04239 Protein of unknown function (DUF421) AWH56_001075 PF03600 Citrate transporter AWH56_001080 PF12670 Protein of unknown function (DUF3792) AWH56_001085 PF02699 Preprotein translocase subunit AWH56_001090 PF01702 Queuine tRNA-ribosyltransferase AWH56_001095 PF02547 Queuosine biosynthesis protein AWH56_001100 PF11146 Protein of unknown function (DUF2905) AWH56_001105 PF17864 RuvB AAA lid domain AWH56_001105 PF05491 RuvB C-terminal winged helix domain AWH56_001105 PF05496 Holliday junction DNA helicase RuvB P-loop domain AWH56_001110 PF01330 RuvA N terminal domain AWH56_001110 PF07499 RuvA, C-terminal domain AWH56_001115 PF08955 BofC C-terminal domain AWH56_001115 PF08977 Bypass of Forespore C, N terminal AWH56_001125 PF01476 LysM domain AWH56_001130 PF02445 Quinolinate synthetase A protein AWH56_001135 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AWH56_001135 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AWH56_001140 PF00890 FAD binding domain AWH56_001140 PF02910 Fumarate reductase flavoprotein C-term AWH56_001145 PF00266 Aminotransferase class-V AWH56_001150 PF02829 3H domain AWH56_001150 PF08279 HTH domain AWH56_001155 PF01842 ACT domain AWH56_001155 PF00800 Prephenate dehydratase AWH56_001160 PF01842 ACT domain AWH56_001165 PF01926 50S ribosome-binding GTPase AWH56_001165 PF09269 Domain of unknown function (DUF1967) AWH56_001165 PF01018 GTP1/OBG AWH56_001170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AWH56_001170 PF14682 Sporulation initiation phospho-transferase B, C-terminal AWH56_001175 PF00005 ABC transporter AWH56_001180 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_001190 PF01593 Flavin containing amine oxidoreductase AWH56_001195 PF00762 Ferrochelatase AWH56_001200 PF01208 Uroporphyrinogen decarboxylase (URO-D) AWH56_001205 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_001210 PF05504 Spore germination B3/ GerAC like, C-terminal AWH56_001225 PF00905 Penicillin binding protein transpeptidase domain AWH56_001225 PF00912 Transglycosylase AWH56_001230 PF02683 Cytochrome C biogenesis protein transmembrane region AWH56_001235 PF01546 Peptidase family M20/M25/M40 AWH56_001235 PF07687 Peptidase dimerisation domain AWH56_001240 PF12787 EcsC protein family AWH56_001250 PF05975 Bacterial ABC transporter protein EcsB AWH56_001255 PF00005 ABC transporter AWH56_001260 PF13193 AMP-binding enzyme C-terminal domain AWH56_001260 PF00501 AMP-binding enzyme AWH56_001265 PF01230 HIT domain AWH56_001270 PF00266 Aminotransferase class-V AWH56_001285 PF01047 MarR family AWH56_001295 PF13610 DDE domain AWH56_001300 PF13610 DDE domain AWH56_001305 PF09680 Family of unknown function AWH56_001325 PF01336 OB-fold nucleic acid binding domain AWH56_001325 PF01966 HD domain AWH56_001330 PF00672 HAMP domain AWH56_001330 PF00512 His Kinase A (phospho-acceptor) domain AWH56_001330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_001335 PF00072 Response regulator receiver domain AWH56_001335 PF00486 Transcriptional regulatory protein, C terminal AWH56_001355 PF00149 Calcineurin-like phosphoesterase AWH56_001375 PF06133 Control of competence regulator ComK, YlbF/YmcA AWH56_001380 PF04286 Protein of unknown function (DUF445) AWH56_001385 PF14398 YheC/D like ATP-grasp AWH56_001390 PF14398 YheC/D like ATP-grasp AWH56_001395 PF14398 YheC/D like ATP-grasp AWH56_001400 PF14398 YheC/D like ATP-grasp AWH56_001410 PF01022 Bacterial regulatory protein, arsR family AWH56_001420 PF13556 PucR C-terminal helix-turn-helix domain AWH56_001425 PF17912 MalK OB fold domain AWH56_001425 PF03459 TOBE domain AWH56_001425 PF00005 ABC transporter AWH56_001435 PF00269 Small, acid-soluble spore proteins, alpha/beta type AWH56_001440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_001445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_001465 PF02678 Pirin AWH56_001465 PF17954 Quercetinase C-terminal cupin domain AWH56_001470 PF13460 NAD(P)H-binding AWH56_001475 PF00664 ABC transporter transmembrane region AWH56_001475 PF00005 ABC transporter AWH56_001480 PF00005 ABC transporter AWH56_001480 PF00664 ABC transporter transmembrane region AWH56_001485 PF04203 Sortase domain AWH56_001495 PF01336 OB-fold nucleic acid binding domain AWH56_001495 PF07733 Bacterial DNA polymerase III alpha NTPase domain AWH56_001495 PF02811 PHP domain AWH56_001495 PF14579 Helix-hairpin-helix motif AWH56_001495 PF11490 DNA polymerase III polC-type N-terminus II AWH56_001495 PF00929 Exonuclease AWH56_001495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AWH56_001500 PF00571 CBS domain AWH56_001500 PF01743 Poly A polymerase head domain AWH56_001545 PF08448 PAS fold AWH56_001545 PF00990 Diguanylate cyclase, GGDEF domain AWH56_001560 PF05368 NmrA-like family AWH56_001575 PF00210 Ferritin-like domain AWH56_001580 PF02645 Uncharacterised protein, DegV family COG1307 AWH56_001600 PF00313 'Cold-shock' DNA-binding domain AWH56_001610 PF03845 Spore germination protein AWH56_001615 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_001620 PF05504 Spore germination B3/ GerAC like, C-terminal AWH56_001625 PF11121 Protein of unknown function (DUF2639) AWH56_001640 PF01381 Helix-turn-helix AWH56_001680 PF00005 ABC transporter AWH56_001685 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_001690 PF05504 Spore germination B3/ GerAC like, C-terminal AWH56_001700 PF02027 RolB/RolC glucosidase family AWH56_001700 PF01593 Flavin containing amine oxidoreductase AWH56_001705 PF01479 S4 domain AWH56_001705 PF00849 RNA pseudouridylate synthase AWH56_001710 PF01966 HD domain AWH56_001710 PF11871 Domain of unknown function (DUF3391) AWH56_001725 PF01966 HD domain AWH56_001740 PF01699 Sodium/calcium exchanger protein AWH56_001745 PF02896 PEP-utilising enzyme, TIM barrel domain AWH56_001745 PF00391 PEP-utilising enzyme, mobile domain AWH56_001745 PF05524 PEP-utilising enzyme, N-terminal AWH56_001750 PF00381 PTS HPr component phosphorylation site AWH56_001755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AWH56_001755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AWH56_001760 PF00294 pfkB family carbohydrate kinase AWH56_001765 PF00455 DeoR C terminal sensor domain AWH56_001765 PF08220 DeoR-like helix-turn-helix domain AWH56_001770 PF09335 SNARE associated Golgi protein AWH56_001775 PF02028 BCCT, betaine/carnitine/choline family transporter AWH56_001785 PF07690 Major Facilitator Superfamily AWH56_001800 PF04647 Accessory gene regulator B AWH56_001810 PF00005 ABC transporter AWH56_001810 PF03459 TOBE domain AWH56_001815 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_001820 PF12728 Helix-turn-helix domain AWH56_001820 PF12727 PBP superfamily domain AWH56_001825 PF12849 PBP superfamily domain AWH56_001830 PF01699 Sodium/calcium exchanger protein AWH56_001835 PF09335 SNARE associated Golgi protein AWH56_001850 PF13610 DDE domain AWH56_001855 PF07690 Major Facilitator Superfamily AWH56_001860 PF03600 Citrate transporter AWH56_001860 PF02080 TrkA-C domain AWH56_001875 PF03176 MMPL family AWH56_001875 PF12823 Domain of unknown function (DUF3817) AWH56_001910 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AWH56_001910 PF13542 Helix-turn-helix domain of transposase family ISL3 AWH56_001910 PF01610 Transposase AWH56_001920 PF00245 Alkaline phosphatase AWH56_001930 PF02673 Bacitracin resistance protein BacA AWH56_001935 PF01098 Cell cycle protein AWH56_001990 PF01609 Transposase DDE domain AWH56_002000 PF00665 Integrase core domain AWH56_002005 PF00665 Integrase core domain AWH56_002010 PF01695 IstB-like ATP binding protein AWH56_002065 PF13408 Recombinase zinc beta ribbon domain AWH56_002065 PF00239 Resolvase, N terminal domain AWH56_002065 PF07508 Recombinase AWH56_002135 PF01609 Transposase DDE domain AWH56_002150 PF00561 alpha/beta hydrolase fold AWH56_002155 PF00067 Cytochrome P450 AWH56_002170 PF01869 BadF/BadG/BcrA/BcrD ATPase family AWH56_002205 PF09388 Spo0E like sporulation regulatory protein AWH56_002210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AWH56_002210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AWH56_002210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AWH56_002210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AWH56_002215 PF01266 FAD dependent oxidoreductase AWH56_002215 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AWH56_002220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AWH56_002220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AWH56_002225 PF00230 Major intrinsic protein AWH56_002230 PF04309 Glycerol-3-phosphate responsive antiterminator AWH56_002240 PF00795 Carbon-nitrogen hydrolase AWH56_002240 PF00583 Acetyltransferase (GNAT) family AWH56_002260 PF02653 Branched-chain amino acid transport system / permease component AWH56_002265 PF02653 Branched-chain amino acid transport system / permease component AWH56_002270 PF00005 ABC transporter AWH56_002275 PF02608 ABC transporter substrate-binding protein PnrA-like AWH56_002320 PF00072 Response regulator receiver domain AWH56_002325 PF02335 Cytochrome c552 AWH56_002330 PF03264 NapC/NirT cytochrome c family, N-terminal region AWH56_002335 PF01546 Peptidase family M20/M25/M40 AWH56_002345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_002345 PF00512 His Kinase A (phospho-acceptor) domain AWH56_002345 PF00989 PAS fold AWH56_002345 PF13188 PAS domain AWH56_002345 PF13426 PAS domain AWH56_002350 PF00990 Diguanylate cyclase, GGDEF domain AWH56_002350 PF00360 Phytochrome region AWH56_002350 PF00563 EAL domain AWH56_002350 PF01590 GAF domain AWH56_002355 PF00005 ABC transporter AWH56_002355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_002360 PF00005 ABC transporter AWH56_002360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_002365 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_002370 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_002370 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_002380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AWH56_002385 PF03150 Di-haem cytochrome c peroxidase AWH56_002395 PF02583 Metal-sensitive transcriptional repressor AWH56_002400 PF01206 Sulfurtransferase TusA AWH56_002405 PF00753 Metallo-beta-lactamase superfamily AWH56_002405 PF00581 Rhodanese-like domain AWH56_002410 PF01206 Sulfurtransferase TusA AWH56_002410 PF00581 Rhodanese-like domain AWH56_002415 PF13686 DsrE/DsrF/DrsH-like family AWH56_002425 PF00916 Sulfate permease family AWH56_002425 PF01740 STAS domain AWH56_002440 PF13247 4Fe-4S dicluster domain AWH56_002440 PF12800 4Fe-4S binding domain AWH56_002450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_002450 PF00512 His Kinase A (phospho-acceptor) domain AWH56_002450 PF00989 PAS fold AWH56_002450 PF08447 PAS fold AWH56_002465 PF00005 ABC transporter AWH56_002470 PF01012 Electron transfer flavoprotein domain AWH56_002475 PF01012 Electron transfer flavoprotein domain AWH56_002475 PF00766 Electron transfer flavoprotein FAD-binding domain AWH56_002490 PF00873 AcrB/AcrD/AcrF family AWH56_002495 PF00873 AcrB/AcrD/AcrF family AWH56_002500 PF13610 DDE domain AWH56_002505 PF00005 ABC transporter AWH56_002525 PF13492 GAF domain AWH56_002525 PF07730 Histidine kinase AWH56_002525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_002530 PF00196 Bacterial regulatory proteins, luxR family AWH56_002530 PF00072 Response regulator receiver domain AWH56_002545 PF02743 Cache domain AWH56_002545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_002545 PF00672 HAMP domain AWH56_002550 PF10011 Predicted membrane protein (DUF2254) AWH56_002555 PF06725 3D domain AWH56_002555 PF01476 LysM domain AWH56_002565 PF00704 Glycosyl hydrolases family 18 AWH56_002570 PF03435 Saccharopine dehydrogenase NADP binding domain AWH56_002570 PF16653 Saccharopine dehydrogenase C-terminal domain AWH56_002575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AWH56_002635 PF09125 Cytochrome C oxidase subunit II, transmembrane AWH56_002635 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AWH56_002640 PF00115 Cytochrome C and Quinol oxidase polypeptide I AWH56_002655 PF01040 UbiA prenyltransferase family AWH56_002665 PF01032 FecCD transport family AWH56_002670 PF01032 FecCD transport family AWH56_002680 PF02311 AraC-like ligand binding domain AWH56_002680 PF12833 Helix-turn-helix domain AWH56_002685 PF01381 Helix-turn-helix AWH56_002695 PF07681 DoxX AWH56_002700 PF01638 HxlR-like helix-turn-helix AWH56_002705 PF00589 Phage integrase family AWH56_002705 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_002735 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AWH56_002735 PF01348 Type II intron maturase AWH56_002745 PF00293 NUDIX domain AWH56_002810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_002810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_002815 PF00171 Aldehyde dehydrogenase family AWH56_002820 PF03328 HpcH/HpaI aldolase/citrate lyase family AWH56_002825 PF08240 Alcohol dehydrogenase GroES-like domain AWH56_002825 PF00107 Zinc-binding dehydrogenase AWH56_002830 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_002830 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_002840 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_002845 PF02595 Glycerate kinase family AWH56_002850 PF07729 FCD domain AWH56_002850 PF00392 Bacterial regulatory proteins, gntR family AWH56_002865 PF00665 Integrase core domain AWH56_002870 PF01695 IstB-like ATP binding protein AWH56_002875 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_002875 PF00589 Phage integrase family AWH56_002880 PF00589 Phage integrase family AWH56_002885 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_002885 PF00589 Phage integrase family AWH56_002900 PF13361 UvrD-like helicase C-terminal domain AWH56_002900 PF00580 UvrD/REP helicase N-terminal domain AWH56_002925 PF00239 Resolvase, N terminal domain AWH56_002925 PF02796 Helix-turn-helix domain of resolvase AWH56_002960 PF00082 Subtilase family AWH56_002965 PF04285 Protein of unknown function (DUF444) AWH56_002970 PF10502 Signal peptidase, peptidase S26 AWH56_002980 PF06798 PrkA serine protein kinase C-terminal domain AWH56_002980 PF08298 PrkA AAA domain AWH56_002985 PF00912 Transglycosylase AWH56_002985 PF00905 Penicillin binding protein transpeptidase domain AWH56_002990 PF17328 Family of unknown function (DUF5366) AWH56_002995 PF00588 SpoU rRNA Methylase family AWH56_003000 PF12671 Putative amidase domain AWH56_003005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AWH56_003005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AWH56_003010 PF08331 Domain of unknown function (DUF1730) AWH56_003025 PF12833 Helix-turn-helix domain AWH56_003030 PF06580 Histidine kinase AWH56_003035 PF00465 Iron-containing alcohol dehydrogenase AWH56_003040 PF02954 Bacterial regulatory protein, Fis family AWH56_003040 PF00072 Response regulator receiver domain AWH56_003040 PF00158 Sigma-54 interaction domain AWH56_003045 PF00512 His Kinase A (phospho-acceptor) domain AWH56_003045 PF00989 PAS fold AWH56_003045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_003050 PF00465 Iron-containing alcohol dehydrogenase AWH56_003055 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AWH56_003075 PF03707 Bacterial signalling protein N terminal repeat AWH56_003075 PF00563 EAL domain AWH56_003075 PF00990 Diguanylate cyclase, GGDEF domain AWH56_003085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_003085 PF08447 PAS fold AWH56_003085 PF13426 PAS domain AWH56_003090 PF00665 Integrase core domain AWH56_003095 PF01695 IstB-like ATP binding protein AWH56_003100 PF00196 Bacterial regulatory proteins, luxR family AWH56_003100 PF00072 Response regulator receiver domain AWH56_003115 PF06745 KaiC AWH56_003120 PF13610 DDE domain AWH56_003125 PF00072 Response regulator receiver domain AWH56_003235 PF14540 Nucleotidyltransferase-like AWH56_003235 PF18576 Helix-turn-helix domain AWH56_003240 PF11023 Zinc-ribbon containing domain AWH56_003245 PF01475 Ferric uptake regulator family AWH56_003250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_003255 PF00578 AhpC/TSA family AWH56_003260 PF07885 Ion channel AWH56_003275 PF00005 ABC transporter AWH56_003280 PF03816 Cell envelope-related transcriptional attenuator domain AWH56_003285 PF00202 Aminotransferase class-III AWH56_003290 PF04898 Glutamate synthase central domain AWH56_003290 PF00310 Glutamine amidotransferases class-II AWH56_003290 PF01645 Conserved region in glutamate synthase AWH56_003290 PF01493 GXGXG motif AWH56_003295 PF06081 Aromatic acid exporter family member 1 AWH56_003320 PF00664 ABC transporter transmembrane region AWH56_003320 PF00005 ABC transporter AWH56_003325 PF04167 Protein of unknown function (DUF402) AWH56_003360 PF00155 Aminotransferase class I and II AWH56_003375 PF02417 Chromate transporter AWH56_003380 PF02417 Chromate transporter AWH56_003390 PF01609 Transposase DDE domain AWH56_003400 PF14815 NUDIX domain AWH56_003400 PF00730 HhH-GPD superfamily base excision DNA repair protein AWH56_003410 PF04307 LexA-binding, inner membrane-associated putative hydrolase AWH56_003415 PF14043 WVELL protein AWH56_003420 PF08176 Small acid-soluble spore protein K family AWH56_003430 PF08838 Protein of unknown function (DUF1811) AWH56_003435 PF02652 L-lactate permease AWH56_003440 PF02631 RecX family AWH56_003445 PF08338 Domain of unknown function (DUF1731) AWH56_003445 PF01370 NAD dependent epimerase/dehydratase family AWH56_003450 PF13382 Adenine deaminase C-terminal domain AWH56_003450 PF01979 Amidohydrolase family AWH56_003465 PF14151 YfhD-like protein AWH56_003475 PF07730 Histidine kinase AWH56_003480 PF00072 Response regulator receiver domain AWH56_003480 PF00196 Bacterial regulatory proteins, luxR family AWH56_003490 PF00583 Acetyltransferase (GNAT) family AWH56_003495 PF00202 Aminotransferase class-III AWH56_003500 PF06339 Ectoine synthase AWH56_003520 PF03358 NADPH-dependent FMN reductase AWH56_003540 PF00072 Response regulator receiver domain AWH56_003540 PF00196 Bacterial regulatory proteins, luxR family AWH56_003545 PF07730 Histidine kinase AWH56_003545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_003570 PF01212 Beta-eliminating lyase AWH56_003585 PF16868 NMT1-like family AWH56_003595 PF00196 Bacterial regulatory proteins, luxR family AWH56_003595 PF00072 Response regulator receiver domain AWH56_003600 PF07730 Histidine kinase AWH56_003605 PF00487 Fatty acid desaturase AWH56_003665 PF00072 Response regulator receiver domain AWH56_003665 PF00196 Bacterial regulatory proteins, luxR family AWH56_003670 PF13610 DDE domain AWH56_003675 PF17874 MalT-like TPR region AWH56_003675 PF00196 Bacterial regulatory proteins, luxR family AWH56_003685 PF01066 CDP-alcohol phosphatidyltransferase AWH56_003690 PF13545 Crp-like helix-turn-helix domain AWH56_003690 PF00027 Cyclic nucleotide-binding domain AWH56_003695 PF00403 Heavy-metal-associated domain AWH56_003705 PF01207 Dihydrouridine synthase (Dus) AWH56_003710 PF01113 Dihydrodipicolinate reductase, N-terminus AWH56_003710 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain AWH56_003770 PF00589 Phage integrase family AWH56_003770 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_003785 PF13408 Recombinase zinc beta ribbon domain AWH56_003785 PF07508 Recombinase AWH56_003795 PF00899 ThiF family AWH56_003795 PF14461 Prokaryotic E2 family B AWH56_003805 PF01734 Patatin-like phospholipase AWH56_003850 PF03050 Transposase IS66 family AWH56_003850 PF13817 IS66 C-terminal element AWH56_003850 PF13007 Transposase C of IS166 homeodomain AWH56_003850 PF13005 zinc-finger binding domain of transposase IS66 AWH56_003875 PF13817 IS66 C-terminal element AWH56_003875 PF13007 Transposase C of IS166 homeodomain AWH56_003875 PF03050 Transposase IS66 family AWH56_003875 PF13005 zinc-finger binding domain of transposase IS66 AWH56_003900 PF13333 Integrase core domain AWH56_003900 PF00665 Integrase core domain AWH56_003900 PF13276 HTH-like domain AWH56_003905 PF13333 Integrase core domain AWH56_003905 PF00665 Integrase core domain AWH56_003905 PF13276 HTH-like domain AWH56_003910 PF00665 Integrase core domain AWH56_003910 PF13333 Integrase core domain AWH56_003935 PF03334 Na+/H+ antiporter subunit AWH56_003940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AWH56_003945 PF01899 Na+/H+ ion antiporter subunit AWH56_003950 PF00361 Proton-conducting membrane transporter AWH56_003955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AWH56_003960 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AWH56_003965 PF00361 Proton-conducting membrane transporter AWH56_003965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AWH56_003965 PF13244 Domain of unknown function (DUF4040) AWH56_004005 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_004005 PF00589 Phage integrase family AWH56_004010 PF01458 Uncharacterized protein family (UPF0051) AWH56_004015 PF01592 NifU-like N terminal domain AWH56_004020 PF00266 Aminotransferase class-V AWH56_004025 PF01458 Uncharacterized protein family (UPF0051) AWH56_004030 PF00005 ABC transporter AWH56_004045 PF02627 Carboxymuconolactone decarboxylase family AWH56_004055 PF03180 NLPA lipoprotein AWH56_004060 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_004065 PF00005 ABC transporter AWH56_004065 PF09383 NIL domain AWH56_004085 PF01597 Glycine cleavage H-protein AWH56_004090 PF03960 ArsC family AWH56_004100 PF02770 Acyl-CoA dehydrogenase, middle domain AWH56_004100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AWH56_004100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AWH56_004105 PF02803 Thiolase, C-terminal domain AWH56_004105 PF00108 Thiolase, N-terminal domain AWH56_004110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AWH56_004110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AWH56_004110 PF00378 Enoyl-CoA hydratase/isomerase AWH56_004120 PF07875 Coat F domain AWH56_004135 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AWH56_004140 PF00510 Cytochrome c oxidase subunit III AWH56_004145 PF00115 Cytochrome C and Quinol oxidase polypeptide I AWH56_004150 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AWH56_004155 PF00942 Cellulose binding domain AWH56_004155 PF12791 Anti-sigma factor N-terminus AWH56_004160 PF04542 Sigma-70 region 2 AWH56_004200 PF00672 HAMP domain AWH56_004200 PF00512 His Kinase A (phospho-acceptor) domain AWH56_004200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_004205 PF00486 Transcriptional regulatory protein, C terminal AWH56_004205 PF00072 Response regulator receiver domain AWH56_004220 PF00486 Transcriptional regulatory protein, C terminal AWH56_004220 PF00072 Response regulator receiver domain AWH56_004225 PF00403 Heavy-metal-associated domain AWH56_004230 PF02743 Cache domain AWH56_004230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_004230 PF00672 HAMP domain AWH56_004260 PF00394 Multicopper oxidase AWH56_004260 PF07732 Multicopper oxidase AWH56_004260 PF07731 Multicopper oxidase AWH56_004270 PF01790 Prolipoprotein diacylglyceryl transferase AWH56_004300 PF00512 His Kinase A (phospho-acceptor) domain AWH56_004300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_004300 PF18719 ArlS sensor domain AWH56_004315 PF13537 Glutamine amidotransferase domain AWH56_004315 PF00733 Asparagine synthase AWH56_004320 PF00877 NlpC/P60 family AWH56_004345 PF03960 ArsC family AWH56_004350 PF09335 SNARE associated Golgi protein AWH56_004360 PF03050 Transposase IS66 family AWH56_004360 PF13817 IS66 C-terminal element AWH56_004360 PF13005 zinc-finger binding domain of transposase IS66 AWH56_004360 PF13007 Transposase C of IS166 homeodomain AWH56_004380 PF00512 His Kinase A (phospho-acceptor) domain AWH56_004380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_004380 PF00672 HAMP domain AWH56_004385 PF00072 Response regulator receiver domain AWH56_004385 PF00486 Transcriptional regulatory protein, C terminal AWH56_004390 PF13537 Glutamine amidotransferase domain AWH56_004390 PF00733 Asparagine synthase AWH56_004395 PF01476 LysM domain AWH56_004395 PF00877 NlpC/P60 family AWH56_004410 PF00398 Ribosomal RNA adenine dimethylase AWH56_004415 PF02600 Disulfide bond formation protein DsbB AWH56_004420 PF13462 Thioredoxin AWH56_004430 PF03636 Glycosyl hydrolase family 65, N-terminal domain AWH56_004430 PF03632 Glycosyl hydrolase family 65 central catalytic domain AWH56_004430 PF03633 Glycosyl hydrolase family 65, C-terminal domain AWH56_004435 PF13419 Haloacid dehalogenase-like hydrolase AWH56_004445 PF00356 Bacterial regulatory proteins, lacI family AWH56_004460 PF04299 Putative FMN-binding domain AWH56_004485 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AWH56_004485 PF13542 Helix-turn-helix domain of transposase family ISL3 AWH56_004485 PF01610 Transposase AWH56_004525 PF12841 YvrJ protein family AWH56_004545 PF00589 Phage integrase family AWH56_004545 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_004580 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_004580 PF00589 Phage integrase family AWH56_004590 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_004590 PF17862 AAA+ lid domain AWH56_004590 PF01434 Peptidase family M41 AWH56_004605 PF01668 SmpB protein AWH56_004610 PF00575 S1 RNA binding domain AWH56_004610 PF00773 RNB domain AWH56_004610 PF17876 Cold shock domain AWH56_004610 PF08206 Ribonuclease B OB domain AWH56_004615 PF12146 Serine aminopeptidase, S33 AWH56_004620 PF00561 alpha/beta hydrolase fold AWH56_004625 PF03840 Preprotein translocase SecG subunit AWH56_004630 PF03952 Enolase, N-terminal domain AWH56_004630 PF00113 Enolase, C-terminal TIM barrel domain AWH56_004635 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AWH56_004635 PF01676 Metalloenzyme superfamily AWH56_004640 PF00121 Triosephosphate isomerase AWH56_004645 PF00162 Phosphoglycerate kinase AWH56_004650 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AWH56_004650 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AWH56_004655 PF04198 Putative sugar-binding domain AWH56_004665 PF04552 Sigma-54, DNA binding domain AWH56_004665 PF00309 Sigma-54 factor, Activator interacting domain (AID) AWH56_004665 PF04963 Sigma-54 factor, core binding domain AWH56_004670 PF00574 Clp protease AWH56_004675 PF00381 PTS HPr component phosphorylation site AWH56_004680 PF10298 WhiA N-terminal LAGLIDADG-like domain AWH56_004680 PF14527 WhiA LAGLIDADG-like domain AWH56_004680 PF02650 WhiA C-terminal HTH domain AWH56_004685 PF01933 Uncharacterised protein family UPF0052 AWH56_004690 PF03668 P-loop ATPase protein family AWH56_004695 PF00293 NUDIX domain AWH56_004700 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_004710 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AWH56_004710 PF01502 Phosphoribosyl-AMP cyclohydrolase AWH56_004715 PF00977 Histidine biosynthesis protein AWH56_004720 PF00977 Histidine biosynthesis protein AWH56_004725 PF00117 Glutamine amidotransferase class-I AWH56_004730 PF00475 Imidazoleglycerol-phosphate dehydratase AWH56_004735 PF00815 Histidinol dehydrogenase AWH56_004740 PF01634 ATP phosphoribosyltransferase AWH56_004745 PF13393 Histidyl-tRNA synthetase AWH56_004750 PF01804 Penicillin amidase AWH56_004760 PF00700 Bacterial flagellin C-terminal helical region AWH56_004760 PF00669 Bacterial flagellin N-terminal helical region AWH56_004765 PF14602 Hexapeptide repeat of succinyl-transferase AWH56_004770 PF13419 Haloacid dehalogenase-like hydrolase AWH56_004775 PF07670 Nucleoside recognition AWH56_004780 PF01790 Prolipoprotein diacylglyceryl transferase AWH56_004785 PF07475 HPr Serine kinase C-terminal domain AWH56_004785 PF02603 HPr Serine kinase N terminus AWH56_004790 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AWH56_004795 PF04024 PspC domain AWH56_004800 PF13349 Putative adhesin AWH56_004805 PF17760 UvrA interaction domain AWH56_004805 PF17755 UvrA DNA-binding domain AWH56_004810 PF04851 Type III restriction enzyme, res subunit AWH56_004810 PF02151 UvrB/uvrC motif AWH56_004810 PF00271 Helicase conserved C-terminal domain AWH56_004810 PF12344 Ultra-violet resistance protein B AWH56_004810 PF17757 UvrB interaction domain AWH56_004815 PF07690 Major Facilitator Superfamily AWH56_004840 PF17820 PDZ domain AWH56_004845 PF17820 PDZ domain AWH56_004845 PF03572 Peptidase family S41 AWH56_004845 PF01471 Putative peptidoglycan binding domain AWH56_004850 PF01476 LysM domain AWH56_004850 PF08525 Opacity-associated protein A N-terminal motif AWH56_004850 PF01551 Peptidase family M23 AWH56_004855 PF18075 FtsX extracellular domain AWH56_004855 PF02687 FtsX-like permease family AWH56_004860 PF00005 ABC transporter AWH56_004865 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AWH56_004880 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AWH56_004880 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AWH56_004890 PF07516 SecA Wing and Scaffold domain AWH56_004890 PF07517 SecA DEAD-like domain AWH56_004890 PF01043 SecA preprotein cross-linking domain AWH56_004890 PF02810 SEC-C motif AWH56_004895 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AWH56_004895 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AWH56_004900 PF00313 'Cold-shock' DNA-binding domain AWH56_004905 PF00733 Asparagine synthase AWH56_004905 PF13537 Glutamine amidotransferase domain AWH56_004910 PF13529 Peptidase_C39 like family AWH56_004920 PF00436 Single-strand binding protein family AWH56_004930 PF16657 Maltogenic Amylase, C-terminal domain AWH56_004930 PF02903 Alpha amylase, N-terminal ig-like domain AWH56_004930 PF00128 Alpha amylase, catalytic domain AWH56_004950 PF01078 Magnesium chelatase, subunit ChlI AWH56_004950 PF13335 Magnesium chelatase, subunit ChlI C-terminal AWH56_004955 PF17782 DprA winged helix domain AWH56_004955 PF02481 DNA recombination-mediator protein A AWH56_004975 PF08780 Nucleotidyltransferase substrate binding protein like AWH56_004990 PF00963 Cohesin domain AWH56_004990 PF00395 S-layer homology domain AWH56_005005 PF02561 Flagellar protein FliS AWH56_005010 PF02465 Flagellar hook-associated protein 2 N-terminus AWH56_005010 PF07195 Flagellar hook-associated protein 2 C-terminus AWH56_005015 PF03646 FlaG protein AWH56_005020 PF00700 Bacterial flagellin C-terminal helical region AWH56_005020 PF00669 Bacterial flagellin N-terminal helical region AWH56_005025 PF02599 Global regulator protein family AWH56_005030 PF02623 FliW protein AWH56_005045 PF00669 Bacterial flagellin N-terminal helical region AWH56_005045 PF00700 Bacterial flagellin C-terminal helical region AWH56_005050 PF00460 Flagella basal body rod protein AWH56_005050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AWH56_005080 PF00271 Helicase conserved C-terminal domain AWH56_005080 PF04851 Type III restriction enzyme, res subunit AWH56_005125 PF00963 Cohesin domain AWH56_005125 PF00395 S-layer homology domain AWH56_005135 PF05105 Bacteriophage holin family AWH56_005145 PF00589 Phage integrase family AWH56_005145 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_005240 PF00574 Clp protease AWH56_005255 PF03354 Phage Terminase AWH56_005305 PF13392 HNH endonuclease AWH56_005350 PF04851 Type III restriction enzyme, res subunit AWH56_005350 PF00271 Helicase conserved C-terminal domain AWH56_005440 PF02796 Helix-turn-helix domain of resolvase AWH56_005440 PF00239 Resolvase, N terminal domain AWH56_005450 PF02645 Uncharacterised protein, DegV family COG1307 AWH56_005455 PF00072 Response regulator receiver domain AWH56_005455 PF00196 Bacterial regulatory proteins, luxR family AWH56_005460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_005460 PF07730 Histidine kinase AWH56_005460 PF05384 Sensor protein DegS AWH56_005470 PF13333 Integrase core domain AWH56_005470 PF00665 Integrase core domain AWH56_005470 PF13276 HTH-like domain AWH56_005475 PF01205 Uncharacterized protein family UPF0029 AWH56_005475 PF09186 Domain of unknown function (DUF1949) AWH56_005480 PF03816 Cell envelope-related transcriptional attenuator domain AWH56_005485 PF07517 SecA DEAD-like domain AWH56_005485 PF07516 SecA Wing and Scaffold domain AWH56_005485 PF01043 SecA preprotein cross-linking domain AWH56_005495 PF00082 Subtilase family AWH56_005500 PF08239 Bacterial SH3 domain AWH56_005500 PF01520 N-acetylmuramoyl-L-alanine amidase AWH56_005510 PF00395 S-layer homology domain AWH56_005530 PF01548 Transposase AWH56_005530 PF02371 Transposase IS116/IS110/IS902 family AWH56_005535 PF03734 L,D-transpeptidase catalytic domain AWH56_005555 PF03023 Lipid II flippase MurJ AWH56_005565 PF00963 Cohesin domain AWH56_005565 PF00395 S-layer homology domain AWH56_005590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AWH56_005590 PF00205 Thiamine pyrophosphate enzyme, central domain AWH56_005590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AWH56_005595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_005595 PF00512 His Kinase A (phospho-acceptor) domain AWH56_005595 PF00989 PAS fold AWH56_005655 PF00149 Calcineurin-like phosphoesterase AWH56_005655 PF02872 5'-nucleotidase, C-terminal domain AWH56_005660 PF01610 Transposase AWH56_005660 PF13542 Helix-turn-helix domain of transposase family ISL3 AWH56_005660 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AWH56_005665 PF01979 Amidohydrolase family AWH56_005670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AWH56_005675 PF00480 ROK family AWH56_005685 PF01915 Glycosyl hydrolase family 3 C-terminal domain AWH56_005685 PF00933 Glycosyl hydrolase family 3 N terminal domain AWH56_005700 PF01547 Bacterial extracellular solute-binding protein AWH56_005705 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_005710 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_005720 PF01380 SIS domain AWH56_005720 PF01418 Helix-turn-helix domain, rpiR family AWH56_005725 PF05448 Acetyl xylan esterase (AXE1) AWH56_005730 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AWH56_005735 PF04854 Protein of unknown function, DUF624 AWH56_005755 PF13333 Integrase core domain AWH56_005755 PF13276 HTH-like domain AWH56_005755 PF00665 Integrase core domain AWH56_005785 PF02608 ABC transporter substrate-binding protein PnrA-like AWH56_005790 PF00672 HAMP domain AWH56_005790 PF02743 Cache domain AWH56_005790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_005825 PF00589 Phage integrase family AWH56_005825 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_005870 PF00561 alpha/beta hydrolase fold AWH56_005890 PF13335 Magnesium chelatase, subunit ChlI C-terminal AWH56_005890 PF01078 Magnesium chelatase, subunit ChlI AWH56_005960 PF08378 Nuclease-related domain AWH56_005990 PF01609 Transposase DDE domain AWH56_006005 PF01078 Magnesium chelatase, subunit ChlI AWH56_006005 PF13335 Magnesium chelatase, subunit ChlI C-terminal AWH56_006035 PF03808 Glycosyl transferase WecB/TagA/CpsF family AWH56_006040 PF00953 Glycosyl transferase family 4 AWH56_006045 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AWH56_006045 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AWH56_006045 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AWH56_006055 PF13439 Glycosyltransferase Family 4 AWH56_006055 PF00534 Glycosyl transferases group 1 AWH56_006060 PF03023 Lipid II flippase MurJ AWH56_006085 PF13276 HTH-like domain AWH56_006085 PF00665 Integrase core domain AWH56_006085 PF13333 Integrase core domain AWH56_006090 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AWH56_006090 PF01473 Putative cell wall binding repeat AWH56_006090 PF17890 Peptidoglycan hydrolase LytB WW-like domain AWH56_006090 PF18342 Endo-beta-N-acetylglucosaminidase LytB WW domain AWH56_006100 PF00877 NlpC/P60 family AWH56_006105 PF05922 Peptidase inhibitor I9 AWH56_006105 PF00082 Subtilase family AWH56_006110 PF01520 N-acetylmuramoyl-L-alanine amidase AWH56_006110 PF00395 S-layer homology domain AWH56_006115 PF00877 NlpC/P60 family AWH56_006115 PF01476 LysM domain AWH56_006120 PF00990 Diguanylate cyclase, GGDEF domain AWH56_006120 PF03707 Bacterial signalling protein N terminal repeat AWH56_006120 PF00563 EAL domain AWH56_006125 PF07977 FabA-like domain AWH56_006140 PF00460 Flagella basal body rod protein AWH56_006140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AWH56_006145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AWH56_006145 PF00460 Flagella basal body rod protein AWH56_006155 PF12116 Stage III sporulation protein D AWH56_006165 PF08671 Anti-repressor SinI AWH56_006165 PF01381 Helix-turn-helix AWH56_006170 PF00571 CBS domain AWH56_006175 PF00474 Sodium:solute symporter family AWH56_006190 PF01551 Peptidase family M23 AWH56_006195 PF08486 Stage II sporulation protein AWH56_006200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AWH56_006205 PF08680 TATA-box binding AWH56_006210 PF06612 Protein of unknown function (DUF1146) AWH56_006215 PF00361 Proton-conducting membrane transporter AWH56_006220 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AWH56_006220 PF00361 Proton-conducting membrane transporter AWH56_006225 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AWH56_006225 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AWH56_006225 PF00361 Proton-conducting membrane transporter AWH56_006230 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AWH56_006235 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AWH56_006240 PF12838 4Fe-4S dicluster domain AWH56_006245 PF00146 NADH dehydrogenase AWH56_006250 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AWH56_006255 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AWH56_006260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AWH56_006265 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AWH56_006270 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AWH56_006270 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AWH56_006275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AWH56_006275 PF02874 ATP synthase alpha/beta family, beta-barrel domain AWH56_006280 PF00231 ATP synthase AWH56_006285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AWH56_006285 PF02874 ATP synthase alpha/beta family, beta-barrel domain AWH56_006285 PF00306 ATP synthase alpha/beta chain, C terminal domain AWH56_006290 PF00213 ATP synthase delta (OSCP) subunit AWH56_006295 PF00430 ATP synthase B/B' CF(0) AWH56_006300 PF00137 ATP synthase subunit C AWH56_006305 PF00119 ATP synthase A chain AWH56_006310 PF03899 ATP synthase I chain AWH56_006320 PF13860 FlgD Ig-like domain AWH56_006320 PF00082 Subtilase family AWH56_006320 PF02225 PA domain AWH56_006320 PF05922 Peptidase inhibitor I9 AWH56_006330 PF02350 UDP-N-acetylglucosamine 2-epimerase AWH56_006340 PF00464 Serine hydroxymethyltransferase AWH56_006345 PF04260 Protein of unknown function (DUF436) AWH56_006350 PF02502 Ribose/Galactose Isomerase AWH56_006355 PF00672 HAMP domain AWH56_006355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_006355 PF12729 Four helix bundle sensory module for signal transduction AWH56_006360 PF01451 Low molecular weight phosphotyrosine protein phosphatase AWH56_006360 PF01451 Low molecular weight phosphotyrosine protein phosphatase AWH56_006365 PF02659 Putative manganese efflux pump AWH56_006370 PF01300 Telomere recombination AWH56_006370 PF03481 Putative GTP-binding controlling metal-binding AWH56_006380 PF09551 Stage II sporulation protein R (spore_II_R) AWH56_006385 PF17827 PrmC N-terminal domain AWH56_006385 PF13847 Methyltransferase domain AWH56_006390 PF00472 RF-1 domain AWH56_006390 PF03462 PCRF domain AWH56_006400 PF00265 Thymidine kinase AWH56_006405 PF01197 Ribosomal protein L31 AWH56_006410 PF07497 Rho termination factor, RNA-binding domain AWH56_006410 PF07498 Rho termination factor, N-terminal domain AWH56_006410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AWH56_006415 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AWH56_006420 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AWH56_006425 PF00923 Transaldolase/Fructose-6-phosphate aldolase AWH56_006430 PF01116 Fructose-bisphosphate aldolase class-II AWH56_006435 PF00072 Response regulator receiver domain AWH56_006440 PF00117 Glutamine amidotransferase class-I AWH56_006440 PF06418 CTP synthase N-terminus AWH56_006445 PF05066 HB1, ASXL, restriction endonuclease HTH domain AWH56_006450 PF02310 B12 binding domain AWH56_006450 PF01642 Methylmalonyl-CoA mutase AWH56_006455 PF00440 Bacterial regulatory proteins, tetR family AWH56_006455 PF17922 Tetracyclin repressor-like, C-terminal domain AWH56_006460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AWH56_006460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AWH56_006460 PF02770 Acyl-CoA dehydrogenase, middle domain AWH56_006465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AWH56_006465 PF02770 Acyl-CoA dehydrogenase, middle domain AWH56_006465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AWH56_006470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AWH56_006470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AWH56_006475 PF00108 Thiolase, N-terminal domain AWH56_006475 PF02803 Thiolase, C-terminal domain AWH56_006480 PF13183 4Fe-4S dicluster domain AWH56_006480 PF02754 Cysteine-rich domain AWH56_006485 PF13091 PLD-like domain AWH56_006485 PF13396 Phospholipase_D-nuclease N-terminal AWH56_006495 PF00561 alpha/beta hydrolase fold AWH56_006505 PF03485 Arginyl tRNA synthetase N terminal domain AWH56_006505 PF00750 tRNA synthetases class I (R) AWH56_006505 PF05746 DALR anticodon binding domain AWH56_006515 PF00491 Arginase family AWH56_006520 PF17284 Spermidine synthase tetramerisation domain AWH56_006525 PF00912 Transglycosylase AWH56_006525 PF00905 Penicillin binding protein transpeptidase domain AWH56_006530 PF08741 YwhD family AWH56_006535 PF01361 Tautomerase enzyme AWH56_006550 PF01966 HD domain AWH56_006555 PF07293 Protein of unknown function (DUF1450) AWH56_006560 PF03099 Biotin/lipoate A/B protein ligase family AWH56_006565 PF01515 Phosphate acetyl/butaryl transferase AWH56_006570 PF00440 Bacterial regulatory proteins, tetR family AWH56_006570 PF13977 BetI-type transcriptional repressor, C-terminal AWH56_006575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_006575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AWH56_006580 PF00378 Enoyl-CoA hydratase/isomerase AWH56_006585 PF06778 Chlorite dismutase AWH56_006590 PF07486 Cell Wall Hydrolase AWH56_006595 PF09671 Spore coat protein (Spore_GerQ) AWH56_006600 PF04241 Protein of unknown function (DUF423) AWH56_006615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_006615 PF00512 His Kinase A (phospho-acceptor) domain AWH56_006615 PF00989 PAS fold AWH56_006615 PF13426 PAS domain AWH56_006615 PF13188 PAS domain AWH56_006625 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AWH56_006625 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AWH56_006630 PF03167 Uracil DNA glycosylase superfamily AWH56_006635 PF00293 NUDIX domain AWH56_006645 PF03129 Anticodon binding domain AWH56_006645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AWH56_006655 PF00294 pfkB family carbohydrate kinase AWH56_006660 PF00271 Helicase conserved C-terminal domain AWH56_006660 PF00270 DEAD/DEAH box helicase AWH56_006670 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AWH56_006670 PF00749 tRNA synthetases class I (E and Q), catalytic domain AWH56_006675 PF01910 Thiamine-binding protein AWH56_006685 PF01609 Transposase DDE domain AWH56_006695 PF00990 Diguanylate cyclase, GGDEF domain AWH56_006700 PF01541 GIY-YIG catalytic domain AWH56_006715 PF00535 Glycosyl transferase family 2 AWH56_006735 PF00072 Response regulator receiver domain AWH56_006735 PF00486 Transcriptional regulatory protein, C terminal AWH56_006755 PF00072 Response regulator receiver domain AWH56_006755 PF00486 Transcriptional regulatory protein, C terminal AWH56_006785 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_006785 PF00589 Phage integrase family AWH56_006815 PF13610 DDE domain AWH56_006825 PF17862 AAA+ lid domain AWH56_006825 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_006825 PF01434 Peptidase family M41 AWH56_006835 PF18766 SWI2/SNF2 ATPase AWH56_006835 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AWH56_006835 PF11867 Domain of unknown function (DUF3387) AWH56_006845 PF02384 N-6 DNA Methylase AWH56_006845 PF12161 HsdM N-terminal domain AWH56_006865 PF13610 DDE domain AWH56_006875 PF12826 Helix-hairpin-helix motif AWH56_006875 PF04002 RadC-like JAB domain AWH56_006900 PF00239 Resolvase, N terminal domain AWH56_006905 PF02590 Predicted SPOUT methyltransferase AWH56_006915 PF13180 PDZ domain AWH56_006920 PF00753 Metallo-beta-lactamase superfamily AWH56_006925 PF09648 YycH protein AWH56_006930 PF07435 YycH protein AWH56_006935 PF00672 HAMP domain AWH56_006935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_006935 PF00512 His Kinase A (phospho-acceptor) domain AWH56_006935 PF13426 PAS domain AWH56_006940 PF00072 Response regulator receiver domain AWH56_006940 PF00486 Transcriptional regulatory protein, C terminal AWH56_006945 PF01551 Peptidase family M23 AWH56_006945 PF01476 LysM domain AWH56_006980 PF00709 Adenylosuccinate synthetase AWH56_006985 PF14489 QueF-like protein AWH56_006990 PF04055 Radical SAM superfamily AWH56_006995 PF01242 6-pyruvoyl tetrahydropterin synthase AWH56_007000 PF06508 Queuosine biosynthesis protein QueC AWH56_007005 PF00772 DnaB-like helicase N terminal domain AWH56_007005 PF03796 DnaB-like helicase C terminal domain AWH56_007010 PF01281 Ribosomal protein L9, N-terminal domain AWH56_007010 PF03948 Ribosomal protein L9, C-terminal domain AWH56_007015 PF02272 DHHA1 domain AWH56_007015 PF01368 DHH family AWH56_007020 PF09991 Predicted membrane protein (DUF2232) AWH56_007025 PF02254 TrkA-N domain AWH56_007025 PF02080 TrkA-C domain AWH56_007030 PF01084 Ribosomal protein S18 AWH56_007035 PF00436 Single-strand binding protein family AWH56_007040 PF01250 Ribosomal protein S6 AWH56_007045 PF01926 50S ribosome-binding GTPase AWH56_007045 PF06071 Protein of unknown function (DUF933) AWH56_007050 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_007050 PF00384 Molybdopterin oxidoreductase AWH56_007050 PF01568 Molydopterin dinucleotide binding domain AWH56_007055 PF06107 Bacterial protein of unknown function (DUF951) AWH56_007065 PF06866 Protein of unknown function (DUF1256) AWH56_007075 PF00266 Aminotransferase class-V AWH56_007080 PF02195 ParB-like nuclease domain AWH56_007080 PF17762 HTH domain found in ParB protein AWH56_007085 PF13614 AAA domain AWH56_007090 PF17762 HTH domain found in ParB protein AWH56_007090 PF02195 ParB-like nuclease domain AWH56_007095 PF02527 rRNA small subunit methyltransferase G AWH56_007100 PF13932 GidA associated domain AWH56_007100 PF01134 Glucose inhibited division protein A AWH56_007105 PF01926 50S ribosome-binding GTPase AWH56_007105 PF12631 MnmE helical domain AWH56_007105 PF10396 GTP-binding protein TrmE N-terminus AWH56_007110 PF14804 Jag N-terminus AWH56_007110 PF01424 R3H domain AWH56_007115 PF02096 60Kd inner membrane protein AWH56_007120 PF01809 Putative membrane protein insertion efficiency factor AWH56_007125 PF00825 Ribonuclease P AWH56_007130 PF00468 Ribosomal protein L34 AWH56_007135 PF08299 Bacterial dnaA protein helix-turn-helix AWH56_007135 PF11638 DnaA N-terminal domain AWH56_007135 PF00308 Bacterial dnaA protein AWH56_007140 PF02768 DNA polymerase III beta subunit, C-terminal domain AWH56_007140 PF02767 DNA polymerase III beta subunit, central domain AWH56_007140 PF00712 DNA polymerase III beta subunit, N-terminal domain AWH56_007150 PF02463 RecF/RecN/SMC N terminal domain AWH56_007155 PF04025 Domain of unknown function (DUF370) AWH56_007160 PF01751 Toprim domain AWH56_007160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_007160 PF00986 DNA gyrase B subunit, carboxyl terminus AWH56_007160 PF00204 DNA gyrase B AWH56_007165 PF00521 DNA gyrase/topoisomerase IV, subunit A AWH56_007165 PF03989 DNA gyrase C-terminal domain, beta-propeller AWH56_007170 PF01966 HD domain AWH56_007195 PF14175 YaaC-like Protein AWH56_007200 PF00478 IMP dehydrogenase / GMP reductase domain AWH56_007200 PF00571 CBS domain AWH56_007205 PF00768 D-alanyl-D-alanine carboxypeptidase AWH56_007205 PF07943 Penicillin-binding protein 5, C-terminal domain AWH56_007210 PF01680 SOR/SNZ family AWH56_007215 PF01174 SNO glutamine amidotransferase family AWH56_007220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AWH56_007220 PF02403 Seryl-tRNA synthetase N-terminal domain AWH56_007225 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007230 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007230 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_007235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_007235 PF00005 ABC transporter AWH56_007240 PF00005 ABC transporter AWH56_007240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_007245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AWH56_007250 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007255 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007255 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_007260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_007260 PF00005 ABC transporter AWH56_007265 PF00005 ABC transporter AWH56_007265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_007270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AWH56_007275 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007280 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007280 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_007285 PF00005 ABC transporter AWH56_007285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_007290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_007290 PF00005 ABC transporter AWH56_007295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AWH56_007300 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007305 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_007305 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_007315 PF02335 Cytochrome c552 AWH56_007325 PF02335 Cytochrome c552 AWH56_007340 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AWH56_007340 PF01578 Cytochrome C assembly protein AWH56_007360 PF00005 ABC transporter AWH56_007370 PF01578 Cytochrome C assembly protein AWH56_007380 PF00578 AhpC/TSA family AWH56_007390 PF14437 MafB19-like deaminase AWH56_007400 PF12169 DNA polymerase III subunits gamma and tau domain III AWH56_007405 PF02575 YbaB/EbfC DNA-binding family AWH56_007410 PF13662 Toprim domain AWH56_007410 PF02132 RecR protein AWH56_007415 PF10704 Protein of unknown function (DUF2508) AWH56_007455 PF01276 Orn/Lys/Arg decarboxylase, major domain AWH56_007455 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AWH56_007460 PF02223 Thymidylate kinase AWH56_007465 PF06153 Cyclic-di-AMP receptor AWH56_007470 PF09115 DNA polymerase III, delta subunit, C terminal AWH56_007475 PF04468 PSP1 C-terminal conserved region AWH56_007480 PF06156 Initiation control protein YabA AWH56_007485 PF05175 Methyltransferase small domain AWH56_007490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AWH56_007495 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AWH56_007495 PF18277 AbrB C-terminal domain AWH56_007500 PF01588 Putative tRNA binding domain AWH56_007500 PF08264 Anticodon-binding domain of tRNA AWH56_007500 PF09334 tRNA synthetases class I (M) AWH56_007505 PF01026 TatD related DNase AWH56_007510 PF07501 G5 domain AWH56_007510 PF03990 G5-linked-Ubiquitin-like domain AWH56_007510 PF06725 3D domain AWH56_007515 PF13331 Domain of unknown function (DUF4093) AWH56_007515 PF13662 Toprim domain AWH56_007520 PF00398 Ribosomal RNA adenine dimethylase AWH56_007525 PF05582 YabG peptidase U57 AWH56_007530 PF06257 Biofilm formation stimulator VEG AWH56_007535 PF00269 Small, acid-soluble spore proteins, alpha/beta type AWH56_007540 PF00288 GHMP kinases N terminal domain AWH56_007540 PF08544 GHMP kinases C terminal AWH56_007545 PF09182 Bacterial purine repressor, N-terminal AWH56_007545 PF00156 Phosphoribosyl transferase domain AWH56_007550 PF01042 Endoribonuclease L-PSP AWH56_007555 PF04026 SpoVG AWH56_007560 PF00483 Nucleotidyl transferase AWH56_007560 PF00132 Bacterial transferase hexapeptide (six repeats) AWH56_007565 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AWH56_007565 PF14572 Phosphoribosyl synthetase-associated domain AWH56_007570 PF14693 Ribosomal protein TL5, C-terminal domain AWH56_007570 PF01386 Ribosomal L25p family AWH56_007575 PF01195 Peptidyl-tRNA hydrolase AWH56_007580 PF10955 Protein of unknown function (DUF2757) AWH56_007585 PF03461 TRCF domain AWH56_007585 PF00271 Helicase conserved C-terminal domain AWH56_007585 PF00270 DEAD/DEAH box helicase AWH56_007585 PF02559 CarD-like/TRCF domain AWH56_007585 PF17757 UvrB interaction domain AWH56_007590 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AWH56_007590 PF15714 Stage V sporulation protein T C-terminal, transcription factor AWH56_007595 PF16363 GDP-mannose 4,6 dehydratase AWH56_007600 PF01943 Polysaccharide biosynthesis protein AWH56_007600 PF14667 Polysaccharide biosynthesis C-terminal domain AWH56_007605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AWH56_007605 PF03819 MazG nucleotide pyrophosphohydrolase domain AWH56_007610 PF01479 S4 domain AWH56_007615 PF07873 YabP family AWH56_007620 PF09578 Spore cortex protein YabQ (Spore_YabQ) AWH56_007625 PF04977 Septum formation initiator AWH56_007630 PF00575 S1 RNA binding domain AWH56_007635 PF07228 Stage II sporulation protein E (SpoIIE) AWH56_007640 PF00092 von Willebrand factor type A domain AWH56_007645 PF00069 Protein kinase domain AWH56_007650 PF06738 Putative threonine/serine exporter AWH56_007660 PF01171 PP-loop family AWH56_007660 PF09179 TilS substrate binding domain AWH56_007660 PF11734 TilS substrate C-terminal domain AWH56_007665 PF00156 Phosphoribosyl transferase domain AWH56_007670 PF06480 FtsH Extracellular AWH56_007670 PF01434 Peptidase family M41 AWH56_007670 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_007670 PF17862 AAA+ lid domain AWH56_007675 PF03309 Type III pantothenate kinase AWH56_007680 PF01430 Hsp33 protein AWH56_007685 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_007690 PF00425 chorismate binding enzyme AWH56_007690 PF04715 Anthranilate synthase component I, N terminal region AWH56_007695 PF00117 Glutamine amidotransferase class-I AWH56_007700 PF01063 Amino-transferase class IV AWH56_007705 PF00809 Pterin binding enzyme AWH56_007710 PF02152 Dihydroneopterin aldolase AWH56_007715 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AWH56_007720 PF01381 Helix-turn-helix AWH56_007725 PF01207 Dihydrouridine synthase (Dus) AWH56_007730 PF01336 OB-fold nucleic acid binding domain AWH56_007730 PF00152 tRNA synthetases class II (D, K and N) AWH56_007835 PF02308 MgtC family AWH56_007840 PF05848 CtsR N-terminal HTH domain AWH56_007840 PF17727 CtsR C-terminal dimerization domain AWH56_007845 PF02151 UvrB/uvrC motif AWH56_007850 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AWH56_007855 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_007855 PF07724 AAA domain (Cdc48 subfamily) AWH56_007855 PF17871 AAA lid domain AWH56_007855 PF02861 Clp amino terminal domain, pathogenicity island component AWH56_007855 PF10431 C-terminal, D2-small domain, of ClpB protein AWH56_007860 PF18073 Rubredoxin metal binding domain AWH56_007865 PF02457 DisA bacterial checkpoint controller nucleotide-binding AWH56_007865 PF10635 DisA bacterial checkpoint controller linker region AWH56_007875 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AWH56_007880 PF02542 YgbB family AWH56_007885 PF00749 tRNA synthetases class I (E and Q), catalytic domain AWH56_007890 PF06426 Serine acetyltransferase, N-terminal AWH56_007890 PF00132 Bacterial transferase hexapeptide (six repeats) AWH56_007895 PF01406 tRNA synthetases class I (C) catalytic domain AWH56_007895 PF09190 DALR domain AWH56_007900 PF00636 Ribonuclease III domain AWH56_007905 PF08032 RNA 2'-O ribose methyltransferase substrate binding AWH56_007905 PF00588 SpoU rRNA Methylase family AWH56_007910 PF05991 YacP-like NYN domain AWH56_007915 PF08281 Sigma-70, region 4 AWH56_007915 PF04542 Sigma-70 region 2 AWH56_007920 PF00471 Ribosomal protein L33 AWH56_007925 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AWH56_007930 PF02357 Transcription termination factor nusG AWH56_007930 PF00467 KOW motif AWH56_007935 PF00298 Ribosomal protein L11, RNA binding domain AWH56_007935 PF03946 Ribosomal protein L11, N-terminal domain AWH56_007940 PF00687 Ribosomal protein L1p/L10e family AWH56_007945 PF00466 Ribosomal protein L10 AWH56_007950 PF00542 Ribosomal protein L7/L12 C-terminal domain AWH56_007950 PF16320 Ribosomal protein L7/L12 dimerisation domain AWH56_007955 PF05175 Methyltransferase small domain AWH56_007960 PF04560 RNA polymerase Rpb2, domain 7 AWH56_007960 PF00562 RNA polymerase Rpb2, domain 6 AWH56_007960 PF10385 RNA polymerase beta subunit external 1 domain AWH56_007960 PF04565 RNA polymerase Rpb2, domain 3 AWH56_007960 PF04561 RNA polymerase Rpb2, domain 2 AWH56_007960 PF04563 RNA polymerase beta subunit AWH56_007965 PF04998 RNA polymerase Rpb1, domain 5 AWH56_007965 PF04997 RNA polymerase Rpb1, domain 1 AWH56_007965 PF00623 RNA polymerase Rpb1, domain 2 AWH56_007965 PF04983 RNA polymerase Rpb1, domain 3 AWH56_007965 PF05000 RNA polymerase Rpb1, domain 4 AWH56_007970 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AWH56_007975 PF00164 Ribosomal protein S12/S23 AWH56_007980 PF00177 Ribosomal protein S7p/S5e AWH56_007985 PF14492 Elongation Factor G, domain II AWH56_007985 PF03764 Elongation factor G, domain IV AWH56_007985 PF00679 Elongation factor G C-terminus AWH56_007985 PF00009 Elongation factor Tu GTP binding domain AWH56_007985 PF03144 Elongation factor Tu domain 2 AWH56_007990 PF00009 Elongation factor Tu GTP binding domain AWH56_007990 PF03144 Elongation factor Tu domain 2 AWH56_007990 PF03143 Elongation factor Tu C-terminal domain AWH56_008000 PF00338 Ribosomal protein S10p/S20e AWH56_008005 PF00297 Ribosomal protein L3 AWH56_008010 PF00573 Ribosomal protein L4/L1 family AWH56_008015 PF00276 Ribosomal protein L23 AWH56_008020 PF00181 Ribosomal Proteins L2, RNA binding domain AWH56_008020 PF03947 Ribosomal Proteins L2, C-terminal domain AWH56_008025 PF00203 Ribosomal protein S19 AWH56_008030 PF00237 Ribosomal protein L22p/L17e AWH56_008035 PF00189 Ribosomal protein S3, C-terminal domain AWH56_008035 PF07650 KH domain AWH56_008040 PF00252 Ribosomal protein L16p/L10e AWH56_008045 PF00831 Ribosomal L29 protein AWH56_008050 PF00366 Ribosomal protein S17 AWH56_008055 PF00238 Ribosomal protein L14p/L23e AWH56_008060 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AWH56_008060 PF00467 KOW motif AWH56_008065 PF00673 ribosomal L5P family C-terminus AWH56_008065 PF00281 Ribosomal protein L5 AWH56_008070 PF00253 Ribosomal protein S14p/S29e AWH56_008075 PF00410 Ribosomal protein S8 AWH56_008080 PF00347 Ribosomal protein L6 AWH56_008085 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AWH56_008090 PF00333 Ribosomal protein S5, N-terminal domain AWH56_008090 PF03719 Ribosomal protein S5, C-terminal domain AWH56_008095 PF00327 Ribosomal protein L30p/L7e AWH56_008100 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AWH56_008105 PF00344 SecY translocase AWH56_008110 PF05191 Adenylate kinase, active site lid AWH56_008115 PF00557 Metallopeptidase family M24 AWH56_008125 PF01176 Translation initiation factor 1A / IF-1 AWH56_008130 PF00444 Ribosomal protein L36 AWH56_008135 PF00416 Ribosomal protein S13/S18 AWH56_008140 PF00411 Ribosomal protein S11 AWH56_008145 PF01000 RNA polymerase Rpb3/RpoA insert domain AWH56_008145 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AWH56_008145 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AWH56_008150 PF01196 Ribosomal protein L17 AWH56_008155 PF00005 ABC transporter AWH56_008160 PF00005 ABC transporter AWH56_008165 PF02361 Cobalt transport protein AWH56_008170 PF01416 tRNA pseudouridine synthase AWH56_008175 PF00572 Ribosomal protein L13 AWH56_008180 PF00380 Ribosomal protein S9/S16 AWH56_008185 PF09557 Domain of unknown function (DUF2382) AWH56_008185 PF11181 Heat induced stress protein YflT AWH56_008190 PF11181 Heat induced stress protein YflT AWH56_008190 PF09557 Domain of unknown function (DUF2382) AWH56_008205 PF10730 Protein of unknown function (DUF2521) AWH56_008210 PF01520 N-acetylmuramoyl-L-alanine amidase AWH56_008215 PF10609 NUBPL iron-transfer P-loop NTPase AWH56_008220 PF17898 Spore germination GerD central core domain AWH56_008225 PF14089 KinB-signalling pathway activation in sporulation AWH56_008235 PF01522 Polysaccharide deacetylase AWH56_008330 PF08281 Sigma-70, region 4 AWH56_008330 PF04542 Sigma-70 region 2 AWH56_008335 PF13490 Putative zinc-finger AWH56_008340 PF02457 DisA bacterial checkpoint controller nucleotide-binding AWH56_008345 PF07949 YbbR-like protein AWH56_008350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AWH56_008350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AWH56_008350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AWH56_008350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AWH56_008355 PF01380 SIS domain AWH56_008360 PF08722 TnsA endonuclease N terminal AWH56_008360 PF08721 TnsA endonuclease C terminal AWH56_008365 PF00665 Integrase core domain AWH56_008370 PF13401 AAA domain AWH56_008370 PF11426 Tn7 transposition regulator TnsC AWH56_008385 PF13610 DDE domain AWH56_008395 PF02796 Helix-turn-helix domain of resolvase AWH56_008395 PF00665 Integrase core domain AWH56_008405 PF00589 Phage integrase family AWH56_008405 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_008410 PF00589 Phage integrase family AWH56_008415 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_008415 PF00589 Phage integrase family AWH56_008435 PF00580 UvrD/REP helicase N-terminal domain AWH56_008435 PF13361 UvrD-like helicase C-terminal domain AWH56_008440 PF01555 DNA methylase AWH56_008440 PF18273 Type III R-M EcoP15I C-terminal domain AWH56_008465 PF02517 CPBP intramembrane metalloprotease AWH56_008475 PF00665 Integrase core domain AWH56_008480 PF01695 IstB-like ATP binding protein AWH56_008605 PF00271 Helicase conserved C-terminal domain AWH56_008605 PF03461 TRCF domain AWH56_008605 PF17757 UvrB interaction domain AWH56_008605 PF02559 CarD-like/TRCF domain AWH56_008605 PF00270 DEAD/DEAH box helicase AWH56_008615 PF13700 Domain of unknown function (DUF4158) AWH56_008615 PF01526 Tn3 transposase DDE domain AWH56_008625 PF00239 Resolvase, N terminal domain AWH56_008625 PF02796 Helix-turn-helix domain of resolvase AWH56_008630 PF01526 Tn3 transposase DDE domain AWH56_008630 PF13700 Domain of unknown function (DUF4158) AWH56_008635 PF13700 Domain of unknown function (DUF4158) AWH56_008635 PF01526 Tn3 transposase DDE domain AWH56_008640 PF02796 Helix-turn-helix domain of resolvase AWH56_008640 PF00239 Resolvase, N terminal domain AWH56_008645 PF01022 Bacterial regulatory protein, arsR family AWH56_008650 PF00403 Heavy-metal-associated domain AWH56_008660 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AWH56_008715 PF01966 HD domain AWH56_008725 PF01751 Toprim domain AWH56_008725 PF01131 DNA topoisomerase AWH56_008750 PF00575 S1 RNA binding domain AWH56_008760 PF00563 EAL domain AWH56_008760 PF00990 Diguanylate cyclase, GGDEF domain AWH56_008760 PF03707 Bacterial signalling protein N terminal repeat AWH56_008790 PF00436 Single-strand binding protein family AWH56_008810 PF04002 RadC-like JAB domain AWH56_008855 PF01609 Transposase DDE domain AWH56_008875 PF12592 Protein of unknown function (DUF3763) AWH56_008875 PF17868 AAA lid domain AWH56_008875 PF07728 AAA domain (dynein-related subfamily) AWH56_008910 PF00145 C-5 cytosine-specific DNA methylase AWH56_008925 PF00460 Flagella basal body rod protein AWH56_008925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AWH56_008925 PF07559 Flagellar basal body protein FlaE AWH56_008945 PF10087 Uncharacterized protein conserved in bacteria (DUF2325) AWH56_009005 PF13538 UvrD-like helicase C-terminal domain AWH56_009085 PF03050 Transposase IS66 family AWH56_009085 PF13817 IS66 C-terminal element AWH56_009085 PF13007 Transposase C of IS166 homeodomain AWH56_009085 PF13005 zinc-finger binding domain of transposase IS66 AWH56_009115 PF08722 TnsA endonuclease N terminal AWH56_009115 PF08721 TnsA endonuclease C terminal AWH56_009120 PF00665 Integrase core domain AWH56_009125 PF13401 AAA domain AWH56_009125 PF11426 Tn7 transposition regulator TnsC AWH56_009160 PF13610 DDE domain AWH56_009210 PF05067 Manganese containing catalase AWH56_009225 PF02634 FdhD/NarQ family AWH56_009235 PF13247 4Fe-4S dicluster domain AWH56_009235 PF09163 Formate dehydrogenase N, transmembrane AWH56_009240 PF03916 Polysulphide reductase, NrfD AWH56_009250 PF08402 TOBE domain AWH56_009250 PF00005 ABC transporter AWH56_009255 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_009260 PF00072 Response regulator receiver domain AWH56_009260 PF00486 Transcriptional regulatory protein, C terminal AWH56_009265 PF00512 His Kinase A (phospho-acceptor) domain AWH56_009265 PF16736 Single Cache-like AWH56_009265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_009265 PF00989 PAS fold AWH56_009285 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AWH56_009290 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_009295 PF00571 CBS domain AWH56_009295 PF00005 ABC transporter AWH56_009300 PF12802 MarR family AWH56_009305 PF08281 Sigma-70, region 4 AWH56_009305 PF04542 Sigma-70 region 2 AWH56_009315 PF00672 HAMP domain AWH56_009315 PF17200 Single Cache domain 2 AWH56_009315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_009320 PF04307 LexA-binding, inner membrane-associated putative hydrolase AWH56_009325 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AWH56_009325 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AWH56_009330 PF00158 Sigma-54 interaction domain AWH56_009330 PF13426 PAS domain AWH56_009330 PF02954 Bacterial regulatory protein, Fis family AWH56_009335 PF00171 Aldehyde dehydrogenase family AWH56_009340 PF00202 Aminotransferase class-III AWH56_009345 PF01619 Proline dehydrogenase AWH56_009350 PF00491 Arginase family AWH56_009355 PF03448 MgtE intracellular N domain AWH56_009355 PF01769 Divalent cation transporter AWH56_009355 PF00571 CBS domain AWH56_009365 PF00581 Rhodanese-like domain AWH56_009370 PF00115 Cytochrome C and Quinol oxidase polypeptide I AWH56_009375 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AWH56_009375 PF09125 Cytochrome C oxidase subunit II, transmembrane AWH56_009385 PF02583 Metal-sensitive transcriptional repressor AWH56_009390 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_009410 PF00005 ABC transporter AWH56_009410 PF08402 TOBE domain AWH56_009415 PF13416 Bacterial extracellular solute-binding protein AWH56_009420 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_009425 PF01694 Rhomboid family AWH56_009430 PF01648 4'-phosphopantetheinyl transferase superfamily AWH56_009435 PF01256 Carbohydrate kinase AWH56_009435 PF03853 YjeF-related protein N-terminus AWH56_009445 PF00842 Alanine racemase, C-terminal domain AWH56_009445 PF01168 Alanine racemase, N-terminal domain AWH56_009450 PF01402 Ribbon-helix-helix protein, copG family AWH56_009455 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AWH56_009460 PF01740 STAS domain AWH56_009460 PF08678 Rsbr N terminal AWH56_009465 PF01740 STAS domain AWH56_009470 PF13581 Histidine kinase-like ATPase domain AWH56_009475 PF07228 Stage II sporulation protein E (SpoIIE) AWH56_009475 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AWH56_009480 PF01740 STAS domain AWH56_009485 PF13581 Histidine kinase-like ATPase domain AWH56_009490 PF04545 Sigma-70, region 4 AWH56_009490 PF04539 Sigma-70 region 3 AWH56_009490 PF04542 Sigma-70 region 2 AWH56_009500 PF17674 HHH domain AWH56_009500 PF00575 S1 RNA binding domain AWH56_009500 PF16921 Tex protein YqgF-like domain AWH56_009500 PF09371 Tex-like protein N-terminal domain AWH56_009510 PF17283 SprT-like zinc ribbon domain AWH56_009510 PF10263 SprT-like family AWH56_009645 PF01053 Cys/Met metabolism PLP-dependent enzyme AWH56_009655 PF00586 AIR synthase related protein, N-terminal domain AWH56_009655 PF02769 AIR synthase related protein, C-terminal domain AWH56_009660 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AWH56_009665 PF00814 Glycoprotease family AWH56_009670 PF00583 Acetyltransferase (GNAT) family AWH56_009675 PF00814 Glycoprotease family AWH56_009685 PF12848 ABC transporter AWH56_009685 PF00005 ABC transporter AWH56_009685 PF16326 ABC transporter C-terminal domain AWH56_009690 PF01967 MoaC family AWH56_009695 PF02629 CoA binding domain AWH56_009695 PF06971 Putative DNA-binding protein N-terminus AWH56_009700 PF07690 Major Facilitator Superfamily AWH56_009705 PF05690 Thiazole biosynthesis protein ThiG AWH56_009710 PF04055 Radical SAM superfamily AWH56_009710 PF06968 Biotin and Thiamin Synthesis associated domain AWH56_009720 PF02517 CPBP intramembrane metalloprotease AWH56_009725 PF00166 Chaperonin 10 Kd subunit AWH56_009730 PF00118 TCP-1/cpn60 chaperonin family AWH56_009735 PF07875 Coat F domain AWH56_009740 PF07726 ATPase family associated with various cellular activities (AAA) AWH56_009740 PF17863 AAA lid domain AWH56_009745 PF01882 Protein of unknown function DUF58 AWH56_009750 PF01841 Transglutaminase-like superfamily AWH56_009750 PF11992 Domain of unknown function (DUF3488) AWH56_009750 PF13559 Domain of unknown function (DUF4129) AWH56_009755 PF00117 Glutamine amidotransferase class-I AWH56_009755 PF00958 GMP synthase C terminal domain AWH56_009755 PF02540 NAD synthase AWH56_009760 PF00860 Permease family AWH56_009795 PF01522 Polysaccharide deacetylase AWH56_009800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AWH56_009805 PF14044 NETI protein AWH56_009810 PF00731 AIR carboxylase AWH56_009815 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AWH56_009815 PF02222 ATP-grasp domain AWH56_009820 PF00206 Lyase AWH56_009820 PF10397 Adenylosuccinate lyase C-terminus AWH56_009825 PF01259 SAICAR synthetase AWH56_009830 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AWH56_009840 PF00586 AIR synthase related protein, N-terminal domain AWH56_009840 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AWH56_009840 PF02769 AIR synthase related protein, C-terminal domain AWH56_009845 PF00156 Phosphoribosyl transferase domain AWH56_009850 PF00586 AIR synthase related protein, N-terminal domain AWH56_009850 PF02769 AIR synthase related protein, C-terminal domain AWH56_009855 PF00551 Formyl transferase AWH56_009860 PF01808 AICARFT/IMPCHase bienzyme AWH56_009860 PF02142 MGS-like domain AWH56_009865 PF02844 Phosphoribosylglycinamide synthetase, N domain AWH56_009865 PF02843 Phosphoribosylglycinamide synthetase, C domain AWH56_009865 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AWH56_009875 PF01979 Amidohydrolase family AWH56_009875 PF13382 Adenine deaminase C-terminal domain AWH56_009880 PF11258 Protein of unknown function (DUF3048) N-terminal domain AWH56_009880 PF17479 Protein of unknown function (DUF3048) C-terminal domain AWH56_009885 PF01371 Trp repressor protein AWH56_009905 PF00491 Arginase family AWH56_009910 PF00005 ABC transporter AWH56_009945 PF01884 PcrB family AWH56_009950 PF00580 UvrD/REP helicase N-terminal domain AWH56_009950 PF13361 UvrD-like helicase C-terminal domain AWH56_009955 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AWH56_009955 PF12826 Helix-hairpin-helix motif AWH56_009955 PF01653 NAD-dependent DNA ligase adenylation domain AWH56_009955 PF00533 BRCA1 C Terminus (BRCT) domain AWH56_009955 PF03120 NAD-dependent DNA ligase OB-fold domain AWH56_009965 PF07537 CamS sex pheromone cAM373 precursor AWH56_009970 PF00474 Sodium:solute symporter family AWH56_009975 PF04012 PspA/IM30 family AWH56_009985 PF01145 SPFH domain / Band 7 family AWH56_009985 PF15975 Flotillin AWH56_009995 PF00300 Histidine phosphatase superfamily (branch 1) AWH56_010000 PF06081 Aromatic acid exporter family member 1 AWH56_010005 PF02686 Glu-tRNAGln amidotransferase C subunit AWH56_010010 PF01425 Amidase AWH56_010015 PF02637 GatB domain AWH56_010015 PF02934 GatB/GatE catalytic domain AWH56_010020 PF00781 Diacylglycerol kinase catalytic domain AWH56_010030 PF04542 Sigma-70 region 2 AWH56_010030 PF08281 Sigma-70, region 4 AWH56_010050 PF05958 tRNA (Uracil-5-)-methyltransferase AWH56_010050 PF01938 TRAM domain AWH56_010060 PF01416 tRNA pseudouridine synthase AWH56_010070 PF00486 Transcriptional regulatory protein, C terminal AWH56_010070 PF00072 Response regulator receiver domain AWH56_010075 PF00672 HAMP domain AWH56_010075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_010075 PF00512 His Kinase A (phospho-acceptor) domain AWH56_010100 PF00188 Cysteine-rich secretory protein family AWH56_010105 PF04055 Radical SAM superfamily AWH56_010115 PF05139 Erythromycin esterase AWH56_010115 PF00156 Phosphoribosyl transferase domain AWH56_010125 PF09021 HutP AWH56_010130 PF00221 Aromatic amino acid lyase AWH56_010135 PF17392 Urocanase C-terminal domain AWH56_010135 PF01175 Urocanase Rossmann-like domain AWH56_010135 PF17391 Urocanase N-terminal domain AWH56_010140 PF07969 Amidohydrolase family AWH56_010145 PF00491 Arginase family AWH56_010160 PF00990 Diguanylate cyclase, GGDEF domain AWH56_010165 PF00269 Small, acid-soluble spore proteins, alpha/beta type AWH56_010175 PF02229 Transcriptional Coactivator p15 (PC4) AWH56_010200 PF00005 ABC transporter AWH56_010200 PF12399 Branched-chain amino acid ATP-binding cassette transporter AWH56_010205 PF00005 ABC transporter AWH56_010210 PF02653 Branched-chain amino acid transport system / permease component AWH56_010215 PF02653 Branched-chain amino acid transport system / permease component AWH56_010225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AWH56_010225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AWH56_010235 PF00561 alpha/beta hydrolase fold AWH56_010245 PF00501 AMP-binding enzyme AWH56_010245 PF13193 AMP-binding enzyme C-terminal domain AWH56_010250 PF02621 Menaquinone biosynthesis AWH56_010255 PF01048 Phosphorylase superfamily AWH56_010270 PF06826 Predicted Permease Membrane Region AWH56_010270 PF02080 TrkA-C domain AWH56_010285 PF03788 LrgA family AWH56_010290 PF04172 LrgB-like family AWH56_010295 PF01964 Radical SAM ThiC family AWH56_010295 PF13667 ThiC-associated domain AWH56_010320 PF01891 Cobalt uptake substrate-specific transmembrane region AWH56_010335 PF12848 ABC transporter AWH56_010335 PF16326 ABC transporter C-terminal domain AWH56_010335 PF00005 ABC transporter AWH56_010345 PF02492 CobW/HypB/UreG, nucleotide-binding domain AWH56_010345 PF07683 Cobalamin synthesis protein cobW C-terminal domain AWH56_010355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_010355 PF00672 HAMP domain AWH56_010355 PF02743 Cache domain AWH56_010370 PF00171 Aldehyde dehydrogenase family AWH56_010370 PF00465 Iron-containing alcohol dehydrogenase AWH56_010375 PF02779 Transketolase, pyrimidine binding domain AWH56_010375 PF00676 Dehydrogenase E1 component AWH56_010375 PF16870 2-oxoglutarate dehydrogenase C-terminal AWH56_010380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AWH56_010380 PF00364 Biotin-requiring enzyme AWH56_010380 PF02817 e3 binding domain AWH56_010390 PF08281 Sigma-70, region 4 AWH56_010390 PF04542 Sigma-70 region 2 AWH56_010425 PF00753 Metallo-beta-lactamase superfamily AWH56_010435 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AWH56_010435 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AWH56_010445 PF00313 'Cold-shock' DNA-binding domain AWH56_010450 PF07690 Major Facilitator Superfamily AWH56_010460 PF16242 Pyridoxamine 5'-phosphate oxidase like AWH56_010465 PF04239 Protein of unknown function (DUF421) AWH56_010475 PF14167 YfkD-like protein AWH56_010480 PF04055 Radical SAM superfamily AWH56_010480 PF08756 YfkB-like domain AWH56_010495 PF05683 Fumarase C-terminus AWH56_010495 PF05681 Fumarate hydratase (Fumerase) AWH56_010500 PF01522 Polysaccharide deacetylase AWH56_010510 PF00730 HhH-GPD superfamily base excision DNA repair protein AWH56_010515 PF01938 TRAM domain AWH56_010515 PF05958 tRNA (Uracil-5-)-methyltransferase AWH56_010520 PF13408 Recombinase zinc beta ribbon domain AWH56_010520 PF07508 Recombinase AWH56_010555 PF01595 Cyclin M transmembrane N-terminal domain AWH56_010555 PF00571 CBS domain AWH56_010555 PF03471 Transporter associated domain AWH56_010560 PF02673 Bacitracin resistance protein BacA AWH56_010565 PF01595 Cyclin M transmembrane N-terminal domain AWH56_010565 PF00571 CBS domain AWH56_010565 PF03471 Transporter associated domain AWH56_010595 PF00924 Mechanosensitive ion channel AWH56_010605 PF09560 Sporulation protein YunB (Spo_YunB) AWH56_010610 PF00589 Phage integrase family AWH56_010615 PF02080 TrkA-C domain AWH56_010615 PF03471 Transporter associated domain AWH56_010615 PF00999 Sodium/hydrogen exchanger family AWH56_010625 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AWH56_010625 PF00361 Proton-conducting membrane transporter AWH56_010625 PF13244 Domain of unknown function (DUF4040) AWH56_010735 PF00395 S-layer homology domain AWH56_010735 PF00963 Cohesin domain AWH56_010815 PF13610 DDE domain AWH56_010830 PF01925 Sulfite exporter TauE/SafE AWH56_010835 PF02872 5'-nucleotidase, C-terminal domain AWH56_010840 PF08827 Domain of unknown function (DUF1805) AWH56_010845 PF11871 Domain of unknown function (DUF3391) AWH56_010845 PF01966 HD domain AWH56_010850 PF00303 Thymidylate synthase AWH56_010855 PF00186 Dihydrofolate reductase AWH56_010860 PF09560 Sporulation protein YunB (Spo_YunB) AWH56_010865 PF03553 Na+/H+ antiporter family AWH56_010870 PF00209 Sodium:neurotransmitter symporter family AWH56_010880 PF01551 Peptidase family M23 AWH56_010885 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AWH56_010885 PF04055 Radical SAM superfamily AWH56_010890 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AWH56_010895 PF06265 Protein of unknown function (DUF1027) AWH56_010910 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AWH56_010915 PF01934 Protein of unknown function DUF86 AWH56_010920 PF08220 DeoR-like helix-turn-helix domain AWH56_010920 PF00455 DeoR C terminal sensor domain AWH56_010925 PF13344 Haloacid dehalogenase-like hydrolase AWH56_010930 PF04608 Phosphatidylglycerophosphatase A AWH56_010940 PF08447 PAS fold AWH56_010940 PF00989 PAS fold AWH56_010940 PF00512 His Kinase A (phospho-acceptor) domain AWH56_010940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_010945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_010945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_010950 PF07293 Protein of unknown function (DUF1450) AWH56_010955 PF01842 ACT domain AWH56_010955 PF00742 Homoserine dehydrogenase AWH56_010955 PF03447 Homoserine dehydrogenase, NAD binding domain AWH56_010960 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_010965 PF08544 GHMP kinases C terminal AWH56_010965 PF00288 GHMP kinases N terminal domain AWH56_010970 PF01106 NifU-like domain AWH56_010975 PF07315 Protein of unknown function (DUF1462) AWH56_010980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_010990 PF07293 Protein of unknown function (DUF1450) AWH56_011000 PF01678 Diaminopimelate epimerase AWH56_011005 PF04055 Radical SAM superfamily AWH56_011015 PF01521 Iron-sulphur cluster biosynthesis AWH56_011020 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_011025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_011030 PF13344 Haloacid dehalogenase-like hydrolase AWH56_011030 PF00293 NUDIX domain AWH56_011035 PF17302 Family of unknown function (DUF5351) AWH56_011045 PF06725 3D domain AWH56_011050 PF01497 Periplasmic binding protein AWH56_011055 PF02681 Divergent PAP2 family AWH56_011060 PF00883 Cytosol aminopeptidase family, catalytic domain AWH56_011060 PF02789 Cytosol aminopeptidase family, N-terminal domain AWH56_011090 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_011095 PF13726 Na+-H+ antiporter family AWH56_011095 PF03553 Na+/H+ antiporter family AWH56_011105 PF02632 BioY family AWH56_011320 PF00583 Acetyltransferase (GNAT) family AWH56_011335 PF03050 Transposase IS66 family AWH56_011335 PF13817 IS66 C-terminal element AWH56_011335 PF13005 zinc-finger binding domain of transposase IS66 AWH56_011335 PF13007 Transposase C of IS166 homeodomain AWH56_011410 PF13542 Helix-turn-helix domain of transposase family ISL3 AWH56_011410 PF01610 Transposase AWH56_011410 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AWH56_011425 PF13817 IS66 C-terminal element AWH56_011425 PF03050 Transposase IS66 family AWH56_011425 PF13005 zinc-finger binding domain of transposase IS66 AWH56_011425 PF13007 Transposase C of IS166 homeodomain AWH56_011485 PF00589 Phage integrase family AWH56_011485 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_011530 PF04229 GrpB protein AWH56_011530 PF13673 Acetyltransferase (GNAT) domain AWH56_011535 PF00583 Acetyltransferase (GNAT) family AWH56_011555 PF00561 alpha/beta hydrolase fold AWH56_011585 PF13302 Acetyltransferase (GNAT) domain AWH56_011590 PF01230 HIT domain AWH56_011650 PF01695 IstB-like ATP binding protein AWH56_011655 PF00665 Integrase core domain AWH56_011720 PF03050 Transposase IS66 family AWH56_011720 PF13007 Transposase C of IS166 homeodomain AWH56_011720 PF13817 IS66 C-terminal element AWH56_011720 PF13005 zinc-finger binding domain of transposase IS66 AWH56_011745 PF00293 NUDIX domain AWH56_011750 PF04542 Sigma-70 region 2 AWH56_011750 PF08281 Sigma-70, region 4 AWH56_011770 PF00583 Acetyltransferase (GNAT) family AWH56_011795 PF00293 NUDIX domain AWH56_011825 PF08818 Domain of unknown function (DU1801) AWH56_011835 PF12679 ABC-2 family transporter protein AWH56_011840 PF00005 ABC transporter AWH56_011850 PF00005 ABC transporter AWH56_011855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_011860 PF00072 Response regulator receiver domain AWH56_011860 PF00486 Transcriptional regulatory protein, C terminal AWH56_011865 PF01797 Transposase IS200 like AWH56_011875 PF07690 Major Facilitator Superfamily AWH56_011910 PF00005 ABC transporter AWH56_011910 PF13732 Domain of unknown function (DUF4162) AWH56_011920 PF13860 FlgD Ig-like domain AWH56_011920 PF02225 PA domain AWH56_011920 PF00082 Subtilase family AWH56_011920 PF05922 Peptidase inhibitor I9 AWH56_011925 PF00563 EAL domain AWH56_011925 PF08668 HDOD domain AWH56_011935 PF00005 ABC transporter AWH56_011935 PF13732 Domain of unknown function (DUF4162) AWH56_011940 PF12679 ABC-2 family transporter protein AWH56_011955 PF02664 S-Ribosylhomocysteinase (LuxS) AWH56_011965 PF01012 Electron transfer flavoprotein domain AWH56_011970 PF00766 Electron transfer flavoprotein FAD-binding domain AWH56_011970 PF01012 Electron transfer flavoprotein domain AWH56_011985 PF00857 Isochorismatase family AWH56_011990 PF01037 Lrp/AsnC ligand binding domain AWH56_011995 PF00155 Aminotransferase class I and II AWH56_012000 PF00271 Helicase conserved C-terminal domain AWH56_012000 PF00270 DEAD/DEAH box helicase AWH56_012005 PF00209 Sodium:neurotransmitter symporter family AWH56_012015 PF00575 S1 RNA binding domain AWH56_012020 PF04070 Domain of unknown function (DUF378) AWH56_012025 PF00465 Iron-containing alcohol dehydrogenase AWH56_012030 PF00342 Phosphoglucose isomerase AWH56_012035 PF08868 YugN-like family AWH56_012045 PF01022 Bacterial regulatory protein, arsR family AWH56_012050 PF00990 Diguanylate cyclase, GGDEF domain AWH56_012050 PF00563 EAL domain AWH56_012050 PF03707 Bacterial signalling protein N terminal repeat AWH56_012055 PF07885 Ion channel AWH56_012055 PF02254 TrkA-N domain AWH56_012075 PF00392 Bacterial regulatory proteins, gntR family AWH56_012075 PF07729 FCD domain AWH56_012080 PF00294 pfkB family carbohydrate kinase AWH56_012085 PF02615 Malate/L-lactate dehydrogenase AWH56_012090 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_012100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_012105 PF00107 Zinc-binding dehydrogenase AWH56_012105 PF08240 Alcohol dehydrogenase GroES-like domain AWH56_012110 PF01081 KDPG and KHG aldolase AWH56_012115 PF03786 D-mannonate dehydratase (UxuA) AWH56_012120 PF00106 short chain dehydrogenase AWH56_012125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AWH56_012130 PF01380 SIS domain AWH56_012135 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_012140 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_012150 PF02743 Cache domain AWH56_012150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_012150 PF06580 Histidine kinase AWH56_012150 PF00672 HAMP domain AWH56_012155 PF12833 Helix-turn-helix domain AWH56_012155 PF00072 Response regulator receiver domain AWH56_012165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AWH56_012165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AWH56_012180 PF03632 Glycosyl hydrolase family 65 central catalytic domain AWH56_012180 PF03636 Glycosyl hydrolase family 65, N-terminal domain AWH56_012180 PF03633 Glycosyl hydrolase family 65, C-terminal domain AWH56_012195 PF13649 Methyltransferase domain AWH56_012200 PF00005 ABC transporter AWH56_012210 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_012235 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_012240 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_012245 PF00005 ABC transporter AWH56_012290 PF13732 Domain of unknown function (DUF4162) AWH56_012290 PF00005 ABC transporter AWH56_012320 PF00672 HAMP domain AWH56_012320 PF12729 Four helix bundle sensory module for signal transduction AWH56_012320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_012325 PF13192 Thioredoxin domain AWH56_012325 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_012330 PF00578 AhpC/TSA family AWH56_012335 PF02595 Glycerate kinase family AWH56_012345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_012345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_012345 PF01842 ACT domain AWH56_012355 PF01557 Fumarylacetoacetate (FAA) hydrolase family AWH56_012380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_012380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_012380 PF01842 ACT domain AWH56_012385 PF03737 Aldolase/RraA AWH56_012390 PF02615 Malate/L-lactate dehydrogenase AWH56_012400 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_012400 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_012405 PF01695 IstB-like ATP binding protein AWH56_012410 PF00665 Integrase core domain AWH56_012415 PF13556 PucR C-terminal helix-turn-helix domain AWH56_012415 PF05651 Putative sugar diacid recognition AWH56_012415 PF17853 GGDEF-like domain AWH56_012420 PF04397 LytTr DNA-binding domain AWH56_012420 PF00072 Response regulator receiver domain AWH56_012425 PF06580 Histidine kinase AWH56_012425 PF07694 5TMR of 5TMR-LYT AWH56_012430 PF01609 Transposase DDE domain AWH56_012440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AWH56_012445 PF01266 FAD dependent oxidoreductase AWH56_012450 PF08666 SAF domain AWH56_012450 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AWH56_012475 PF00005 ABC transporter AWH56_012480 PF01497 Periplasmic binding protein AWH56_012485 PF01032 FecCD transport family AWH56_012490 PF01032 FecCD transport family AWH56_012495 PF00149 Calcineurin-like phosphoesterase AWH56_012500 PF00884 Sulfatase AWH56_012510 PF00571 CBS domain AWH56_012510 PF01595 Cyclin M transmembrane N-terminal domain AWH56_012510 PF03471 Transporter associated domain AWH56_012515 PF02673 Bacitracin resistance protein BacA AWH56_012520 PF00571 CBS domain AWH56_012520 PF01595 Cyclin M transmembrane N-terminal domain AWH56_012520 PF03471 Transporter associated domain AWH56_012535 PF07556 Protein of unknown function (DUF1538) AWH56_012540 PF07556 Protein of unknown function (DUF1538) AWH56_012545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AWH56_012545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AWH56_012550 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AWH56_012580 PF09115 DNA polymerase III, delta subunit, C terminal AWH56_012630 PF00589 Phage integrase family AWH56_012630 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_012655 PF00589 Phage integrase family AWH56_012660 PF00589 Phage integrase family AWH56_012660 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_012685 PF08244 Glycosyl hydrolases family 32 C terminal AWH56_012685 PF00251 Glycosyl hydrolases family 32 N-terminal domain AWH56_012705 PF01348 Type II intron maturase AWH56_012705 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AWH56_012740 PF09335 SNARE associated Golgi protein AWH56_012750 PF13416 Bacterial extracellular solute-binding protein AWH56_012765 PF00005 ABC transporter AWH56_012765 PF08402 TOBE domain AWH56_012775 PF00582 Universal stress protein family AWH56_012780 PF01522 Polysaccharide deacetylase AWH56_012795 PF00381 PTS HPr component phosphorylation site AWH56_012800 PF00391 PEP-utilising enzyme, mobile domain AWH56_012800 PF05524 PEP-utilising enzyme, N-terminal AWH56_012800 PF02896 PEP-utilising enzyme, TIM barrel domain AWH56_012805 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AWH56_012810 PF03123 CAT RNA binding domain AWH56_012810 PF00874 PRD domain AWH56_012815 PF02378 Phosphotransferase system, EIIC AWH56_012815 PF00367 phosphotransferase system, EIIB AWH56_012820 PF00251 Glycosyl hydrolases family 32 N-terminal domain AWH56_012820 PF08244 Glycosyl hydrolases family 32 C terminal AWH56_012830 PF01554 MatE AWH56_012850 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AWH56_012855 PF02797 Chalcone and stilbene synthases, C-terminal domain AWH56_012855 PF00195 Chalcone and stilbene synthases, N-terminal domain AWH56_012860 PF00701 Dihydrodipicolinate synthetase family AWH56_012865 PF00920 Dehydratase family AWH56_012895 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AWH56_012895 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AWH56_012900 PF01418 Helix-turn-helix domain, rpiR family AWH56_012900 PF01380 SIS domain AWH56_012905 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_012910 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_012915 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_012915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_012935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_012935 PF01842 ACT domain AWH56_012935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_012940 PF00209 Sodium:neurotransmitter symporter family AWH56_012955 PF01266 FAD dependent oxidoreductase AWH56_012955 PF00355 Rieske [2Fe-2S] domain AWH56_012965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AWH56_012965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AWH56_012970 PF17202 Single cache domain 3 AWH56_012970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_012970 PF00672 HAMP domain AWH56_012990 PF02416 mttA/Hcf106 family AWH56_013000 PF01568 Molydopterin dinucleotide binding domain AWH56_013000 PF00384 Molybdopterin oxidoreductase AWH56_013000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_013005 PF13247 4Fe-4S dicluster domain AWH56_013005 PF12800 4Fe-4S binding domain AWH56_013030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_013030 PF07730 Histidine kinase AWH56_013035 PF00072 Response regulator receiver domain AWH56_013035 PF00196 Bacterial regulatory proteins, luxR family AWH56_013045 PF01507 Phosphoadenosine phosphosulfate reductase family AWH56_013050 PF14306 PUA-like domain AWH56_013050 PF01747 ATP-sulfurylase AWH56_013055 PF01384 Phosphate transporter family AWH56_013080 PF09680 Family of unknown function AWH56_013085 PF17820 PDZ domain AWH56_013085 PF02163 Peptidase family M50 AWH56_013095 PF00171 Aldehyde dehydrogenase family AWH56_013100 PF00465 Iron-containing alcohol dehydrogenase AWH56_013105 PF02954 Bacterial regulatory protein, Fis family AWH56_013105 PF00158 Sigma-54 interaction domain AWH56_013105 PF00989 PAS fold AWH56_013110 PF02954 Bacterial regulatory protein, Fis family AWH56_013110 PF00989 PAS fold AWH56_013110 PF00158 Sigma-54 interaction domain AWH56_013120 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_013125 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_013130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_013135 PF01144 Coenzyme A transferase AWH56_013140 PF01144 Coenzyme A transferase AWH56_013145 PF00392 Bacterial regulatory proteins, gntR family AWH56_013145 PF07729 FCD domain AWH56_013160 PF00171 Aldehyde dehydrogenase family AWH56_013175 PF00326 Prolyl oligopeptidase family AWH56_013190 PF00392 Bacterial regulatory proteins, gntR family AWH56_013195 PF00005 ABC transporter AWH56_013215 PF00892 EamA-like transporter family AWH56_013225 PF03641 Possible lysine decarboxylase AWH56_013245 PF00990 Diguanylate cyclase, GGDEF domain AWH56_013245 PF00563 EAL domain AWH56_013245 PF03707 Bacterial signalling protein N terminal repeat AWH56_013270 PF01432 Peptidase family M3 AWH56_013270 PF08439 Oligopeptidase F AWH56_013275 PF00313 'Cold-shock' DNA-binding domain AWH56_013280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_013280 PF00512 His Kinase A (phospho-acceptor) domain AWH56_013285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_013285 PF00512 His Kinase A (phospho-acceptor) domain AWH56_013295 PF03006 Haemolysin-III related AWH56_013305 PF01168 Alanine racemase, N-terminal domain AWH56_013305 PF14031 Putative serine dehydratase domain AWH56_013315 PF00392 Bacterial regulatory proteins, gntR family AWH56_013320 PF00005 ABC transporter AWH56_013340 PF09335 SNARE associated Golgi protein AWH56_013345 PF02515 CoA-transferase family III AWH56_013350 PF00108 Thiolase, N-terminal domain AWH56_013350 PF02803 Thiolase, C-terminal domain AWH56_013360 PF02634 FdhD/NarQ family AWH56_013370 PF13247 4Fe-4S dicluster domain AWH56_013385 PF12804 MobA-like NTP transferase domain AWH56_013390 PF03454 MoeA C-terminal region (domain IV) AWH56_013390 PF03453 MoeA N-terminal region (domain I and II) AWH56_013390 PF00994 Probable molybdopterin binding domain AWH56_013395 PF00994 Probable molybdopterin binding domain AWH56_013395 PF03454 MoeA C-terminal region (domain IV) AWH56_013395 PF03453 MoeA N-terminal region (domain I and II) AWH56_013400 PF02416 mttA/Hcf106 family AWH56_013405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_013405 PF17202 Single cache domain 3 AWH56_013405 PF00672 HAMP domain AWH56_013410 PF00313 'Cold-shock' DNA-binding domain AWH56_013415 PF07690 Major Facilitator Superfamily AWH56_013420 PF00293 NUDIX domain AWH56_013430 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_013440 PF01293 Phosphoenolpyruvate carboxykinase AWH56_013445 PF00438 S-adenosylmethionine synthetase, N-terminal domain AWH56_013445 PF02772 S-adenosylmethionine synthetase, central domain AWH56_013445 PF02773 S-adenosylmethionine synthetase, C-terminal domain AWH56_013450 PF00128 Alpha amylase, catalytic domain AWH56_013450 PF02806 Alpha amylase, C-terminal all-beta domain AWH56_013450 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AWH56_013455 PF00132 Bacterial transferase hexapeptide (six repeats) AWH56_013455 PF00483 Nucleotidyl transferase AWH56_013460 PF00483 Nucleotidyl transferase AWH56_013465 PF08323 Starch synthase catalytic domain AWH56_013465 PF00534 Glycosyl transferases group 1 AWH56_013470 PF00343 Carbohydrate phosphorylase AWH56_013485 PF00132 Bacterial transferase hexapeptide (six repeats) AWH56_013490 PF12146 Serine aminopeptidase, S33 AWH56_013495 PF10776 Protein of unknown function (DUF2600) AWH56_013505 PF02675 S-adenosylmethionine decarboxylase AWH56_013515 PF00484 Carbonic anhydrase AWH56_013520 PF06962 Putative rRNA methylase AWH56_013525 PF16199 Radical_SAM C-terminal domain AWH56_013525 PF04055 Radical SAM superfamily AWH56_013530 PF01212 Beta-eliminating lyase AWH56_013535 PF07690 Major Facilitator Superfamily AWH56_013540 PF00990 Diguanylate cyclase, GGDEF domain AWH56_013540 PF07694 5TMR of 5TMR-LYT AWH56_013545 PF08264 Anticodon-binding domain of tRNA AWH56_013545 PF00133 tRNA synthetases class I (I, L, M and V) AWH56_013545 PF09334 tRNA synthetases class I (M) AWH56_013545 PF13603 Leucyl-tRNA synthetase, Domain 2 AWH56_013560 PF09339 IclR helix-turn-helix domain AWH56_013560 PF01614 Bacterial transcriptional regulator AWH56_013565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_013565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_013570 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_013575 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_013580 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_013585 PF00294 pfkB family carbohydrate kinase AWH56_013590 PF00107 Zinc-binding dehydrogenase AWH56_013590 PF08240 Alcohol dehydrogenase GroES-like domain AWH56_013600 PF04962 KduI/IolB family AWH56_013605 PF01081 KDPG and KHG aldolase AWH56_013630 PF14667 Polysaccharide biosynthesis C-terminal domain AWH56_013630 PF01943 Polysaccharide biosynthesis protein AWH56_013640 PF01098 Cell cycle protein AWH56_013645 PF01098 Cell cycle protein AWH56_013650 PF00849 RNA pseudouridylate synthase AWH56_013650 PF01479 S4 domain AWH56_013655 PF08220 DeoR-like helix-turn-helix domain AWH56_013665 PF01546 Peptidase family M20/M25/M40 AWH56_013670 PF12832 MFS_1 like family AWH56_013685 PF17863 AAA lid domain AWH56_013685 PF07726 ATPase family associated with various cellular activities (AAA) AWH56_013690 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_013695 PF02834 LigT like Phosphoesterase AWH56_013700 PF03788 LrgA family AWH56_013705 PF04172 LrgB-like family AWH56_013725 PF17999 Pullulanase N1-terminal domain AWH56_013725 PF00128 Alpha amylase, catalytic domain AWH56_013725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AWH56_013730 PF01636 Phosphotransferase enzyme family AWH56_013755 PF02390 Putative methyltransferase AWH56_013760 PF00753 Metallo-beta-lactamase superfamily AWH56_013765 PF03807 NADP oxidoreductase coenzyme F420-dependent AWH56_013765 PF14748 Pyrroline-5-carboxylate reductase dimerisation AWH56_013770 PF13302 Acetyltransferase (GNAT) domain AWH56_013775 PF00440 Bacterial regulatory proteins, tetR family AWH56_013795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_013795 PF00989 PAS fold AWH56_013795 PF17203 Single cache domain 3 AWH56_013795 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AWH56_013800 PF00293 NUDIX domain AWH56_013810 PF01709 Transcriptional regulator AWH56_013825 PF04239 Protein of unknown function (DUF421) AWH56_013835 PF05343 M42 glutamyl aminopeptidase AWH56_013840 PF01931 Protein of unknown function DUF84 AWH56_013845 PF00005 ABC transporter AWH56_013870 PF00085 Thioredoxin AWH56_013875 PF03816 Cell envelope-related transcriptional attenuator domain AWH56_013880 PF07285 Protein of unknown function (DUF1444) AWH56_013885 PF17854 FtsK alpha domain AWH56_013885 PF09397 Ftsk gamma domain AWH56_013885 PF01580 FtsK/SpoIIIE family AWH56_013900 PF13302 Acetyltransferase (GNAT) domain AWH56_013925 PF00924 Mechanosensitive ion channel AWH56_013940 PF04542 Sigma-70 region 2 AWH56_013940 PF08281 Sigma-70, region 4 AWH56_013950 PF01225 Mur ligase family, catalytic domain AWH56_013950 PF02875 Mur ligase family, glutamate ligase domain AWH56_013950 PF08245 Mur ligase middle domain AWH56_013955 PF02073 Thermophilic metalloprotease (M29) AWH56_013965 PF12732 YtxH-like protein AWH56_013970 PF11009 Protein of unknown function (DUF2847) AWH56_013975 PF02491 SHS2 domain inserted in FTSA AWH56_013980 PF00793 DAHP synthetase I family AWH56_013980 PF01817 Chorismate mutase type II AWH56_013990 PF00356 Bacterial regulatory proteins, lacI family AWH56_013995 PF01618 MotA/TolQ/ExbB proton channel family AWH56_014000 PF13677 Membrane MotB of proton-channel complex MotA/MotB AWH56_014000 PF00691 OmpA family AWH56_014005 PF01047 MarR family AWH56_014010 PF01479 S4 domain AWH56_014010 PF00579 tRNA synthetases class I (W and Y) AWH56_014015 PF01048 Phosphorylase superfamily AWH56_014020 PF00850 Histone deacetylase domain AWH56_014025 PF00571 CBS domain AWH56_014030 PF00583 Acetyltransferase (GNAT) family AWH56_014035 PF13193 AMP-binding enzyme C-terminal domain AWH56_014035 PF00501 AMP-binding enzyme AWH56_014040 PF00905 Penicillin binding protein transpeptidase domain AWH56_014040 PF00912 Transglycosylase AWH56_014040 PF17092 Penicillin-binding protein OB-like domain AWH56_014045 PF00579 tRNA synthetases class I (W and Y) AWH56_014045 PF01479 S4 domain AWH56_014055 PF01479 S4 domain AWH56_014055 PF00163 Ribosomal protein S4/S9 N-terminal domain AWH56_014060 PF00990 Diguanylate cyclase, GGDEF domain AWH56_014065 PF00440 Bacterial regulatory proteins, tetR family AWH56_014070 PF06160 Septation ring formation regulator, EzrA AWH56_014080 PF00266 Aminotransferase class-V AWH56_014085 PF02568 Thiamine biosynthesis protein (ThiI) AWH56_014085 PF02926 THUMP domain AWH56_014090 PF00269 Small, acid-soluble spore proteins, alpha/beta type AWH56_014095 PF13193 AMP-binding enzyme C-terminal domain AWH56_014095 PF00501 AMP-binding enzyme AWH56_014100 PF01513 ATP-NAD kinase AWH56_014105 PF01343 Peptidase family S49 AWH56_014110 PF06271 RDD family AWH56_014115 PF11167 Protein of unknown function (DUF2953) AWH56_014120 PF09579 Sporulation protein YtfJ (Spore_YtfJ) AWH56_014125 PF08534 Redoxin AWH56_014130 PF02384 N-6 DNA Methylase AWH56_014135 PF00871 Acetokinase family AWH56_014140 PF01966 HD domain AWH56_014140 PF01336 OB-fold nucleic acid binding domain AWH56_014155 PF00561 alpha/beta hydrolase fold AWH56_014160 PF00764 Arginosuccinate synthase AWH56_014165 PF14698 Argininosuccinate lyase C-terminal AWH56_014165 PF00206 Lyase AWH56_014170 PF00582 Universal stress protein family AWH56_014190 PF00557 Metallopeptidase family M24 AWH56_014190 PF01321 Creatinase/Prolidase N-terminal domain AWH56_014195 PF01609 Transposase DDE domain AWH56_014215 PF00571 CBS domain AWH56_014215 PF00392 Bacterial regulatory proteins, gntR family AWH56_014215 PF03061 Thioesterase superfamily AWH56_014215 PF07085 DRTGG domain AWH56_014225 PF02272 DHHA1 domain AWH56_014225 PF01368 DHH family AWH56_014240 PF14034 Sporulation protein YtrH AWH56_014245 PF02811 PHP domain AWH56_014245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AWH56_014245 PF07733 Bacterial DNA polymerase III alpha NTPase domain AWH56_014245 PF01336 OB-fold nucleic acid binding domain AWH56_014245 PF14579 Helix-hairpin-helix motif AWH56_014250 PF03949 Malic enzyme, NAD binding domain AWH56_014250 PF00390 Malic enzyme, N-terminal domain AWH56_014255 PF07729 FCD domain AWH56_014255 PF00392 Bacterial regulatory proteins, gntR family AWH56_014260 PF17848 Acetyl-coA carboxylase zinc finger domain AWH56_014260 PF01039 Carboxyl transferase domain AWH56_014265 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AWH56_014270 PF00365 Phosphofructokinase AWH56_014275 PF00391 PEP-utilising enzyme, mobile domain AWH56_014275 PF00224 Pyruvate kinase, barrel domain AWH56_014275 PF02887 Pyruvate kinase, alpha/beta domain AWH56_014280 PF04186 FxsA cytoplasmic membrane protein AWH56_014285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_014285 PF00672 HAMP domain AWH56_014285 PF02743 Cache domain AWH56_014290 PF01594 AI-2E family transporter AWH56_014295 PF04284 Protein of unknown function (DUF441) AWH56_014300 PF00285 Citrate synthase, C-terminal domain AWH56_014305 PF00180 Isocitrate/isopropylmalate dehydrogenase AWH56_014310 PF00056 lactate/malate dehydrogenase, NAD binding domain AWH56_014310 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AWH56_014325 PF00072 Response regulator receiver domain AWH56_014325 PF00486 Transcriptional regulatory protein, C terminal AWH56_014330 PF00512 His Kinase A (phospho-acceptor) domain AWH56_014330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_014330 PF00989 PAS fold AWH56_014330 PF16736 Single Cache-like AWH56_014335 PF12221 Bacterial membrane protein N terminal AWH56_014335 PF01145 SPFH domain / Band 7 family AWH56_014340 PF01145 SPFH domain / Band 7 family AWH56_014345 PF01367 5'-3' exonuclease, C-terminal SAM fold AWH56_014345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AWH56_014345 PF00476 DNA polymerase family A AWH56_014350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AWH56_014350 PF06827 Zinc finger found in FPG and IleRS AWH56_014350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AWH56_014355 PF02659 Putative manganese efflux pump AWH56_014360 PF01121 Dephospho-CoA kinase AWH56_014365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AWH56_014365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AWH56_014375 PF03477 ATP cone domain AWH56_014380 PF07261 Replication initiation and membrane attachment AWH56_014385 PF01695 IstB-like ATP binding protein AWH56_014385 PF07319 Primosomal protein DnaI N-terminus AWH56_014390 PF04055 Radical SAM superfamily AWH56_014395 PF08812 YtxC-like family AWH56_014400 PF02824 TGS domain AWH56_014400 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AWH56_014400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AWH56_014400 PF03129 Anticodon binding domain AWH56_014410 PF00990 Diguanylate cyclase, GGDEF domain AWH56_014410 PF00563 EAL domain AWH56_014410 PF03707 Bacterial signalling protein N terminal repeat AWH56_014415 PF00707 Translation initiation factor IF-3, C-terminal domain AWH56_014415 PF05198 Translation initiation factor IF-3, N-terminal domain AWH56_014420 PF01632 Ribosomal protein L35 AWH56_014425 PF00453 Ribosomal protein L20 AWH56_014430 PF06961 Protein of unknown function (DUF1294) AWH56_014435 PF09335 SNARE associated Golgi protein AWH56_014450 PF05343 M42 glutamyl aminopeptidase AWH56_014460 PF14098 Small, acid-soluble spore protein I AWH56_014465 PF00588 SpoU rRNA Methylase family AWH56_014465 PF08032 RNA 2'-O ribose methyltransferase substrate binding AWH56_014470 PF01409 tRNA synthetases class II core domain (F) AWH56_014470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AWH56_014475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AWH56_014475 PF03484 tRNA synthetase B5 domain AWH56_014475 PF03483 B3/4 domain AWH56_014475 PF01588 Putative tRNA binding domain AWH56_014475 PF03147 Ferredoxin-fold anticodon binding domain AWH56_014485 PF11858 Domain of unknown function (DUF3378) AWH56_014485 PF01351 Ribonuclease HII AWH56_014490 PF05164 Cell division protein ZapA AWH56_014495 PF02674 Colicin V production protein AWH56_014505 PF00488 MutS domain V AWH56_014505 PF01713 Smr domain AWH56_014510 PF03994 Domain of Unknown Function (DUF350) AWH56_014520 PF13193 AMP-binding enzyme C-terminal domain AWH56_014520 PF00501 AMP-binding enzyme AWH56_014525 PF13193 AMP-binding enzyme C-terminal domain AWH56_014525 PF00501 AMP-binding enzyme AWH56_014540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AWH56_014540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AWH56_014540 PF00034 Cytochrome c AWH56_014545 PF00115 Cytochrome C and Quinol oxidase polypeptide I AWH56_014550 PF08359 YsiA-like protein, C-terminal region AWH56_014550 PF00440 Bacterial regulatory proteins, tetR family AWH56_014555 PF00378 Enoyl-CoA hydratase/isomerase AWH56_014560 PF01012 Electron transfer flavoprotein domain AWH56_014565 PF01012 Electron transfer flavoprotein domain AWH56_014565 PF00766 Electron transfer flavoprotein FAD-binding domain AWH56_014570 PF00085 Thioredoxin AWH56_014575 PF08459 UvrC Helix-hairpin-helix N-terminal AWH56_014575 PF01541 GIY-YIG catalytic domain AWH56_014575 PF02151 UvrB/uvrC motif AWH56_014580 PF13840 ACT domain AWH56_014580 PF00696 Amino acid kinase family AWH56_014585 PF10702 Protein of unknown function (DUF2507) AWH56_014590 PF02386 Cation transport protein AWH56_014595 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AWH56_014600 PF00890 FAD binding domain AWH56_014600 PF02910 Fumarate reductase flavoprotein C-term AWH56_014605 PF13183 4Fe-4S dicluster domain AWH56_014605 PF13085 2Fe-2S iron-sulfur cluster binding domain AWH56_014610 PF03061 Thioesterase superfamily AWH56_014615 PF00196 Bacterial regulatory proteins, luxR family AWH56_014620 PF02667 Short chain fatty acid transporter AWH56_014625 PF01047 MarR family AWH56_014630 PF01177 Asp/Glu/Hydantoin racemase AWH56_014635 PF10646 Sporulation and spore germination AWH56_014640 PF03725 3' exoribonuclease family, domain 2 AWH56_014640 PF01138 3' exoribonuclease family, domain 1 AWH56_014645 PF01725 Ham1 family AWH56_014650 PF12850 Calcineurin-like phosphoesterase superfamily domain AWH56_014670 PF00920 Dehydratase family AWH56_014675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AWH56_014675 PF00205 Thiamine pyrophosphate enzyme, central domain AWH56_014675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AWH56_014680 PF10369 Small subunit of acetolactate synthase AWH56_014680 PF01842 ACT domain AWH56_014685 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AWH56_014685 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AWH56_014690 PF08502 LeuA allosteric (dimerisation) domain AWH56_014690 PF00682 HMGL-like AWH56_014695 PF00180 Isocitrate/isopropylmalate dehydrogenase AWH56_014700 PF00330 Aconitase family (aconitate hydratase) AWH56_014705 PF00694 Aconitase C-terminal domain AWH56_014715 PF05698 Bacterial trigger factor protein (TF) C-terminus AWH56_014715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AWH56_014715 PF05697 Bacterial trigger factor protein (TF) AWH56_014720 PF06689 ClpX C4-type zinc finger AWH56_014720 PF07724 AAA domain (Cdc48 subfamily) AWH56_014720 PF10431 C-terminal, D2-small domain, of ClpB protein AWH56_014725 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_014725 PF05362 Lon protease (S16) C-terminal proteolytic domain AWH56_014730 PF02190 ATP-dependent protease La (LON) substrate-binding domain AWH56_014730 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_014730 PF05362 Lon protease (S16) C-terminal proteolytic domain AWH56_014735 PF01926 50S ribosome-binding GTPase AWH56_014750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AWH56_014750 PF01488 Shikimate / quinate 5-dehydrogenase AWH56_014750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AWH56_014755 PF01578 Cytochrome C assembly protein AWH56_014760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AWH56_014760 PF03900 Porphobilinogen deaminase, C-terminal domain AWH56_014770 PF00490 Delta-aminolevulinic acid dehydratase AWH56_014775 PF00202 Aminotransferase class-III AWH56_014780 PF01476 LysM domain AWH56_014805 PF00005 ABC transporter AWH56_014810 PF00133 tRNA synthetases class I (I, L, M and V) AWH56_014810 PF08264 Anticodon-binding domain of tRNA AWH56_014810 PF10458 Valyl tRNA synthetase tRNA binding arm AWH56_014820 PF08245 Mur ligase middle domain AWH56_014820 PF02875 Mur ligase family, glutamate ligase domain AWH56_014825 PF08245 Mur ligase middle domain AWH56_014825 PF02875 Mur ligase family, glutamate ligase domain AWH56_014830 PF09587 Bacterial capsule synthesis protein PGA_cap AWH56_014840 PF01478 Type IV leader peptidase family AWH56_014840 PF06750 Bacterial Peptidase A24 N-terminal domain AWH56_014860 PF00206 Lyase AWH56_014860 PF10415 Fumarase C C-terminus AWH56_014865 PF02545 Maf-like protein AWH56_014870 PF04002 RadC-like JAB domain AWH56_014880 PF04085 rod shape-determining protein MreC AWH56_014890 PF03775 Septum formation inhibitor MinC, C-terminal domain AWH56_014895 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AWH56_014900 PF00459 Inositol monophosphatase family AWH56_014910 PF00005 ABC transporter AWH56_014915 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_014920 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_014925 PF01551 Peptidase family M23 AWH56_014930 PF02163 Peptidase family M50 AWH56_014935 PF10150 Ribonuclease E/G family AWH56_014935 PF00575 S1 RNA binding domain AWH56_014940 PF00829 Ribosomal prokaryotic L21 protein AWH56_014945 PF04327 Cysteine protease Prp AWH56_014950 PF01016 Ribosomal L27 protein AWH56_014955 PF12706 Beta-lactamase superfamily domain AWH56_014960 PF00672 HAMP domain AWH56_014960 PF02743 Cache domain AWH56_014960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_014965 PF12849 PBP superfamily domain AWH56_014970 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_014975 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_014980 PF00005 ABC transporter AWH56_014985 PF01895 PhoU domain AWH56_014990 PF12705 PD-(D/E)XK nuclease superfamily AWH56_014995 PF00580 UvrD/REP helicase N-terminal domain AWH56_014995 PF13361 UvrD-like helicase C-terminal domain AWH56_014995 PF12705 PD-(D/E)XK nuclease superfamily AWH56_015015 PF00672 HAMP domain AWH56_015015 PF05227 CHASE3 domain AWH56_015015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_015020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AWH56_015020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AWH56_015035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_015040 PF00990 Diguanylate cyclase, GGDEF domain AWH56_015040 PF03707 Bacterial signalling protein N terminal repeat AWH56_015040 PF00563 EAL domain AWH56_015055 PF02096 60Kd inner membrane protein AWH56_015065 PF00665 Integrase core domain AWH56_015070 PF01695 IstB-like ATP binding protein AWH56_015080 PF00027 Cyclic nucleotide-binding domain AWH56_015080 PF00325 Bacterial regulatory proteins, crp family AWH56_015090 PF00392 Bacterial regulatory proteins, gntR family AWH56_015090 PF07729 FCD domain AWH56_015095 PF01470 Pyroglutamyl peptidase AWH56_015110 PF01740 STAS domain AWH56_015120 PF02374 Anion-transporting ATPase AWH56_015125 PF06953 Arsenical resistance operon trans-acting repressor ArsD AWH56_015130 PF01022 Bacterial regulatory protein, arsR family AWH56_015135 PF01758 Sodium Bile acid symporter family AWH56_015140 PF01451 Low molecular weight phosphotyrosine protein phosphatase AWH56_015145 PF03473 MOSC domain AWH56_015145 PF03475 3-alpha domain AWH56_015150 PF02785 Biotin carboxylase C-terminal domain AWH56_015150 PF00289 Biotin carboxylase, N-terminal domain AWH56_015150 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AWH56_015155 PF00440 Bacterial regulatory proteins, tetR family AWH56_015155 PF16925 Tetracyclin repressor-like, C-terminal domain AWH56_015160 PF00364 Biotin-requiring enzyme AWH56_015165 PF01039 Carboxyl transferase domain AWH56_015170 PF02310 B12 binding domain AWH56_015170 PF01642 Methylmalonyl-CoA mutase AWH56_015175 PF02310 B12 binding domain AWH56_015175 PF01642 Methylmalonyl-CoA mutase AWH56_015215 PF13005 zinc-finger binding domain of transposase IS66 AWH56_015215 PF13817 IS66 C-terminal element AWH56_015215 PF03050 Transposase IS66 family AWH56_015215 PF13007 Transposase C of IS166 homeodomain AWH56_015220 PF02683 Cytochrome C biogenesis protein transmembrane region AWH56_015240 PF00672 HAMP domain AWH56_015240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_015240 PF02743 Cache domain AWH56_015245 PF01435 Peptidase family M48 AWH56_015245 PF16491 CAAX prenyl protease N-terminal, five membrane helices AWH56_015270 PF01906 Putative heavy-metal-binding AWH56_015285 PF01554 MatE AWH56_015290 PF12833 Helix-turn-helix domain AWH56_015290 PF02311 AraC-like ligand binding domain AWH56_015295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_015295 PF00672 HAMP domain AWH56_015300 PF13416 Bacterial extracellular solute-binding protein AWH56_015305 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_015310 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_015315 PF16338 Domain of unknown function (DUF4968) AWH56_015315 PF17137 Domain of unknown function (DUF5110) AWH56_015315 PF13802 Galactose mutarotase-like AWH56_015315 PF01055 Glycosyl hydrolases family 31 AWH56_015320 PF00356 Bacterial regulatory proteins, lacI family AWH56_015325 PF01594 AI-2E family transporter AWH56_015330 PF00365 Phosphofructokinase AWH56_015335 PF00581 Rhodanese-like domain AWH56_015345 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AWH56_015345 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AWH56_015360 PF12419 SNF2 Helicase protein AWH56_015360 PF00271 Helicase conserved C-terminal domain AWH56_015360 PF00176 SNF2 family N-terminal domain AWH56_015375 PF03591 AzlC protein AWH56_015385 PF04405 Domain of Unknown function (DUF542) AWH56_015385 PF01814 Hemerythrin HHE cation binding domain AWH56_015395 PF07098 Protein of unknown function (DUF1360) AWH56_015400 PF03150 Di-haem cytochrome c peroxidase AWH56_015415 PF12758 Protein of unknown function (DUF3813) AWH56_015430 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) AWH56_015445 PF03453 MoeA N-terminal region (domain I and II) AWH56_015445 PF03454 MoeA C-terminal region (domain IV) AWH56_015445 PF00994 Probable molybdopterin binding domain AWH56_015450 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AWH56_015455 PF02391 MoaE protein AWH56_015460 PF02597 ThiS family AWH56_015465 PF01883 Iron-sulfur cluster assembly protein AWH56_015480 PF01118 Semialdehyde dehydrogenase, NAD binding domain AWH56_015480 PF02774 Semialdehyde dehydrogenase, dimerisation domain AWH56_015485 PF01960 ArgJ family AWH56_015490 PF00696 Amino acid kinase family AWH56_015495 PF00202 Aminotransferase class-III AWH56_015500 PF00117 Glutamine amidotransferase class-I AWH56_015500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AWH56_015505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AWH56_015505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AWH56_015510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AWH56_015510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AWH56_015515 PF00027 Cyclic nucleotide-binding domain AWH56_015515 PF00325 Bacterial regulatory proteins, crp family AWH56_015525 PF13186 Iron-sulfur cluster-binding domain AWH56_015525 PF04055 Radical SAM superfamily AWH56_015535 PF01568 Molydopterin dinucleotide binding domain AWH56_015535 PF00384 Molybdopterin oxidoreductase AWH56_015535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_015540 PF12800 4Fe-4S binding domain AWH56_015540 PF13247 4Fe-4S dicluster domain AWH56_015555 PF07690 Major Facilitator Superfamily AWH56_015560 PF07690 Major Facilitator Superfamily AWH56_015565 PF00325 Bacterial regulatory proteins, crp family AWH56_015565 PF00027 Cyclic nucleotide-binding domain AWH56_015575 PF14256 YwiC-like protein AWH56_015580 PF14168 YjzC-like protein AWH56_015590 PF01370 NAD dependent epimerase/dehydratase family AWH56_015600 PF03144 Elongation factor Tu domain 2 AWH56_015600 PF00009 Elongation factor Tu GTP binding domain AWH56_015600 PF16658 Class II release factor RF3, C-terminal domain AWH56_015605 PF02608 ABC transporter substrate-binding protein PnrA-like AWH56_015620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AWH56_015620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AWH56_015625 PF00109 Beta-ketoacyl synthase, N-terminal domain AWH56_015625 PF02801 Beta-ketoacyl synthase, C-terminal domain AWH56_015630 PF03816 Cell envelope-related transcriptional attenuator domain AWH56_015635 PF09922 Cell wall-active antibiotics response 4TMS YvqF AWH56_015640 PF07730 Histidine kinase AWH56_015640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_015640 PF00672 HAMP domain AWH56_015645 PF00072 Response regulator receiver domain AWH56_015645 PF00196 Bacterial regulatory proteins, luxR family AWH56_015650 PF00325 Bacterial regulatory proteins, crp family AWH56_015650 PF00027 Cyclic nucleotide-binding domain AWH56_015655 PF01751 Toprim domain AWH56_015655 PF01131 DNA topoisomerase AWH56_015655 PF13342 C-terminal repeat of topoisomerase AWH56_015655 PF01396 Topoisomerase DNA binding C4 zinc finger AWH56_015660 PF10026 Predicted Zn-dependent protease (DUF2268) AWH56_015670 PF12227 Protein of unknown function (DUF3603) AWH56_015675 PF00579 tRNA synthetases class I (W and Y) AWH56_015685 PF00578 AhpC/TSA family AWH56_015690 PF01966 HD domain AWH56_015695 PF12728 Helix-turn-helix domain AWH56_015705 PF13508 Acetyltransferase (GNAT) domain AWH56_015710 PF00873 AcrB/AcrD/AcrF family AWH56_015720 PF03960 ArsC family AWH56_015725 PF03741 Integral membrane protein TerC family AWH56_015730 PF05389 Negative regulator of genetic competence (MecA) AWH56_015735 PF13091 PLD-like domain AWH56_015735 PF13396 Phospholipase_D-nuclease N-terminal AWH56_015740 PF06054 Competence protein CoiA-like family AWH56_015745 PF01432 Peptidase family M3 AWH56_015745 PF08439 Oligopeptidase F AWH56_015755 PF01152 Bacterial-like globin AWH56_015760 PF01464 Transglycosylase SLT domain AWH56_015765 PF01928 CYTH domain AWH56_015775 PF04607 Region found in RelA / SpoT proteins AWH56_015780 PF01513 ATP-NAD kinase AWH56_015785 PF00849 RNA pseudouridylate synthase AWH56_015795 PF00149 Calcineurin-like phosphoesterase AWH56_015805 PF00999 Sodium/hydrogen exchanger family AWH56_015805 PF00582 Universal stress protein family AWH56_015820 PF07098 Protein of unknown function (DUF1360) AWH56_015825 PF00535 Glycosyl transferase family 2 AWH56_015870 PF00535 Glycosyl transferase family 2 AWH56_015870 PF13181 Tetratricopeptide repeat AWH56_015880 PF00535 Glycosyl transferase family 2 AWH56_015885 PF00132 Bacterial transferase hexapeptide (six repeats) AWH56_015885 PF12464 Maltose acetyltransferase AWH56_015885 PF14602 Hexapeptide repeat of succinyl-transferase AWH56_015920 PF16363 GDP-mannose 4,6 dehydratase AWH56_015925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AWH56_015925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AWH56_015930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AWH56_015935 PF01476 LysM domain AWH56_015940 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AWH56_015940 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AWH56_015940 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AWH56_015955 PF00580 UvrD/REP helicase N-terminal domain AWH56_015955 PF13361 UvrD-like helicase C-terminal domain AWH56_015965 PF04101 Glycosyltransferase family 28 C-terminal domain AWH56_015965 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AWH56_015970 PF13673 Acetyltransferase (GNAT) domain AWH56_015980 PF00756 Putative esterase AWH56_015985 PF13610 DDE domain AWH56_015990 PF04608 Phosphatidylglycerophosphatase A AWH56_016010 PF00589 Phage integrase family AWH56_016010 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_016030 PF09299 Mu transposase, C-terminal AWH56_016030 PF00665 Integrase core domain AWH56_016050 PF00356 Bacterial regulatory proteins, lacI family AWH56_016055 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_016060 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_016060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_016065 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_016065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_016070 PF02615 Malate/L-lactate dehydrogenase AWH56_016075 PF00465 Iron-containing alcohol dehydrogenase AWH56_016080 PF00171 Aldehyde dehydrogenase family AWH56_016085 PF03737 Aldolase/RraA AWH56_016090 PF02595 Glycerate kinase family AWH56_016095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_016095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_016110 PF08863 YolD-like protein AWH56_016120 PF10676 Spore germination protein gerPA/gerPF AWH56_016135 PF10737 Spore germination protein GerPC AWH56_016140 PF10803 Spore germination GerPB AWH56_016145 PF10676 Spore germination protein gerPA/gerPF AWH56_016150 PF14069 Stage VI sporulation protein F AWH56_016160 PF00578 AhpC/TSA family AWH56_016165 PF01274 Malate synthase AWH56_016170 PF00990 Diguanylate cyclase, GGDEF domain AWH56_016170 PF00563 EAL domain AWH56_016170 PF13426 PAS domain AWH56_016180 PF13542 Helix-turn-helix domain of transposase family ISL3 AWH56_016180 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AWH56_016180 PF01610 Transposase AWH56_016200 PF00005 ABC transporter AWH56_016215 PF04055 Radical SAM superfamily AWH56_016215 PF13186 Iron-sulfur cluster-binding domain AWH56_016220 PF00990 Diguanylate cyclase, GGDEF domain AWH56_016220 PF03707 Bacterial signalling protein N terminal repeat AWH56_016220 PF00563 EAL domain AWH56_016225 PF00072 Response regulator receiver domain AWH56_016225 PF00990 Diguanylate cyclase, GGDEF domain AWH56_016230 PF00672 HAMP domain AWH56_016230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_016230 PF00512 His Kinase A (phospho-acceptor) domain AWH56_016230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AWH56_016230 PF00072 Response regulator receiver domain AWH56_016230 PF01627 Hpt domain AWH56_016235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_016235 PF00512 His Kinase A (phospho-acceptor) domain AWH56_016235 PF00072 Response regulator receiver domain AWH56_016235 PF09308 LuxQ, periplasmic AWH56_016240 PF01739 CheR methyltransferase, SAM binding domain AWH56_016240 PF03705 CheR methyltransferase, all-alpha domain AWH56_016245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_016245 PF00989 PAS fold AWH56_016245 PF00512 His Kinase A (phospho-acceptor) domain AWH56_016245 PF13188 PAS domain AWH56_016245 PF13426 PAS domain AWH56_016250 PF00881 Nitroreductase family AWH56_016280 PF00011 Hsp20/alpha crystallin family AWH56_016295 PF01717 Cobalamin-independent synthase, Catalytic domain AWH56_016295 PF08267 Cobalamin-independent synthase, N-terminal domain AWH56_016325 PF02687 FtsX-like permease family AWH56_016325 PF12704 MacB-like periplasmic core domain AWH56_016325 PF00005 ABC transporter AWH56_016330 PF00582 Universal stress protein family AWH56_016335 PF00924 Mechanosensitive ion channel AWH56_016340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_016340 PF08447 PAS fold AWH56_016340 PF13426 PAS domain AWH56_016355 PF00463 Isocitrate lyase family AWH56_016360 PF14602 Hexapeptide repeat of succinyl-transferase AWH56_016360 PF00132 Bacterial transferase hexapeptide (six repeats) AWH56_016360 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AWH56_016365 PF07687 Peptidase dimerisation domain AWH56_016365 PF01546 Peptidase family M20/M25/M40 AWH56_016370 PF03698 Uncharacterised protein family (UPF0180) AWH56_016375 PF00924 Mechanosensitive ion channel AWH56_016380 PF10417 C-terminal domain of 1-Cys peroxiredoxin AWH56_016380 PF00578 AhpC/TSA family AWH56_016385 PF00578 AhpC/TSA family AWH56_016405 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AWH56_016405 PF00753 Metallo-beta-lactamase superfamily AWH56_016405 PF17770 Ribonuclease J C-terminal domain AWH56_016410 PF07288 Protein of unknown function (DUF1447) AWH56_016415 PF01327 Polypeptide deformylase AWH56_016430 PF00676 Dehydrogenase E1 component AWH56_016435 PF02779 Transketolase, pyrimidine binding domain AWH56_016435 PF02780 Transketolase, C-terminal domain AWH56_016440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AWH56_016440 PF02817 e3 binding domain AWH56_016440 PF00364 Biotin-requiring enzyme AWH56_016445 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_016445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AWH56_016455 PF06081 Aromatic acid exporter family member 1 AWH56_016460 PF01522 Polysaccharide deacetylase AWH56_016480 PF13610 DDE domain AWH56_016490 PF01276 Orn/Lys/Arg decarboxylase, major domain AWH56_016490 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AWH56_016495 PF05256 Uncharacterised protein family (UPF0223) AWH56_016500 PF06335 Protein of unknown function (DUF1054) AWH56_016510 PF00459 Inositol monophosphatase family AWH56_016520 PF14492 Elongation Factor G, domain II AWH56_016520 PF03144 Elongation factor Tu domain 2 AWH56_016520 PF00009 Elongation factor Tu GTP binding domain AWH56_016520 PF00679 Elongation factor G C-terminus AWH56_016525 PF14036 YlaH-like protein AWH56_016530 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) AWH56_016540 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) AWH56_016545 PF02562 PhoH-like protein AWH56_016545 PF13638 PIN domain AWH56_016550 PF04960 Glutaminase AWH56_016555 PF07408 Protein of unknown function (DUF1507) AWH56_016565 PF00682 HMGL-like AWH56_016565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AWH56_016565 PF02785 Biotin carboxylase C-terminal domain AWH56_016565 PF00289 Biotin carboxylase, N-terminal domain AWH56_016565 PF00364 Biotin-requiring enzyme AWH56_016565 PF02436 Conserved carboxylase domain AWH56_016570 PF02628 Cytochrome oxidase assembly protein AWH56_016575 PF01040 UbiA prenyltransferase family AWH56_016580 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AWH56_016580 PF00034 Cytochrome c AWH56_016580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AWH56_016585 PF00115 Cytochrome C and Quinol oxidase polypeptide I AWH56_016590 PF00510 Cytochrome c oxidase subunit III AWH56_016595 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AWH56_016605 PF01594 AI-2E family transporter AWH56_016615 PF08868 YugN-like family AWH56_016620 PF01411 tRNA synthetases class II (A) AWH56_016620 PF02272 DHHA1 domain AWH56_016620 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AWH56_016625 PF00571 CBS domain AWH56_016630 PF00188 Cysteine-rich secretory protein family AWH56_016630 PF14504 CAP-associated N-terminal AWH56_016640 PF14071 Putative coat protein AWH56_016665 PF03851 UV-endonuclease UvdE AWH56_016670 PF06133 Control of competence regulator ComK, YlbF/YmcA AWH56_016675 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AWH56_016690 PF01467 Cytidylyltransferase-like AWH56_016695 PF07670 Nucleoside recognition AWH56_016700 PF01734 Patatin-like phospholipase AWH56_016705 PF05362 Lon protease (S16) C-terminal proteolytic domain AWH56_016705 PF13180 PDZ domain AWH56_016710 PF05636 HIGH Nucleotidyl Transferase AWH56_016715 PF02620 Large ribosomal RNA subunit accumulation protein YceD AWH56_016720 PF01783 Ribosomal L32p protein family AWH56_016725 PF00378 Enoyl-CoA hydratase/isomerase AWH56_016735 PF00583 Acetyltransferase (GNAT) family AWH56_016740 PF08546 Ketopantoate reductase PanE/ApbA C terminal AWH56_016740 PF02558 Ketopantoate reductase PanE/ApbA AWH56_016750 PF10079 Bacillithiol biosynthesis BshC AWH56_016755 PF02381 MraZ protein, putative antitoxin-like AWH56_016760 PF01795 MraW methylase family AWH56_016770 PF03793 PASTA domain AWH56_016770 PF00905 Penicillin binding protein transpeptidase domain AWH56_016770 PF03717 Penicillin-binding Protein dimerisation domain AWH56_016775 PF03793 PASTA domain AWH56_016775 PF03717 Penicillin-binding Protein dimerisation domain AWH56_016775 PF00905 Penicillin binding protein transpeptidase domain AWH56_016780 PF01225 Mur ligase family, catalytic domain AWH56_016780 PF02875 Mur ligase family, glutamate ligase domain AWH56_016780 PF08245 Mur ligase middle domain AWH56_016785 PF02875 Mur ligase family, glutamate ligase domain AWH56_016785 PF01225 Mur ligase family, catalytic domain AWH56_016785 PF08245 Mur ligase middle domain AWH56_016790 PF00953 Glycosyl transferase family 4 AWH56_016795 PF08245 Mur ligase middle domain AWH56_016795 PF02875 Mur ligase family, glutamate ligase domain AWH56_016800 PF01098 Cell cycle protein AWH56_016805 PF03033 Glycosyltransferase family 28 N-terminal domain AWH56_016805 PF04101 Glycosyltransferase family 28 C-terminal domain AWH56_016810 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AWH56_016810 PF01565 FAD binding domain AWH56_016815 PF08478 POTRA domain, FtsQ-type AWH56_016820 PF05949 Bacterial protein of unknown function (DUF881) AWH56_016830 PF06947 Protein of unknown function (DUF1290) AWH56_016835 PF02491 SHS2 domain inserted in FTSA AWH56_016840 PF12327 FtsZ family, C-terminal domain AWH56_016840 PF00091 Tubulin/FtsZ family, GTPase domain AWH56_016845 PF03419 Sporulation factor SpoIIGA AWH56_016850 PF04542 Sigma-70 region 2 AWH56_016850 PF04545 Sigma-70, region 4 AWH56_016855 PF04545 Sigma-70, region 4 AWH56_016855 PF04542 Sigma-70 region 2 AWH56_016855 PF04539 Sigma-70 region 3 AWH56_016860 PF05239 PRC-barrel domain AWH56_016865 PF02578 Multi-copper polyphenol oxidoreductase laccase AWH56_016870 PF01168 Alanine racemase, N-terminal domain AWH56_016875 PF04472 Cell division protein SepF AWH56_016880 PF02325 YGGT family AWH56_016885 PF01479 S4 domain AWH56_016885 PF17774 Putative RNA-binding domain in YlmH AWH56_016890 PF05103 DivIVA protein AWH56_016895 PF00133 tRNA synthetases class I (I, L, M and V) AWH56_016895 PF08264 Anticodon-binding domain of tRNA AWH56_016895 PF06827 Zinc finger found in FPG and IleRS AWH56_016900 PF01258 Prokaryotic dksA/traR C4-type zinc finger AWH56_016905 PF01252 Signal peptidase (SPase) II AWH56_016910 PF00849 RNA pseudouridylate synthase AWH56_016910 PF01479 S4 domain AWH56_016915 PF00156 Phosphoribosyl transferase domain AWH56_016920 PF00860 Permease family AWH56_016925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AWH56_016925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AWH56_016930 PF01979 Amidohydrolase family AWH56_016935 PF00117 Glutamine amidotransferase class-I AWH56_016935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AWH56_016940 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AWH56_016940 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AWH56_016940 PF02142 MGS-like domain AWH56_016945 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AWH56_016950 PF01180 Dihydroorotate dehydrogenase AWH56_016955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AWH56_016960 PF00156 Phosphoribosyl transferase domain AWH56_016965 PF01209 ubiE/COQ5 methyltransferase family AWH56_016970 PF00005 ABC transporter AWH56_016970 PF00664 ABC transporter transmembrane region AWH56_016975 PF00005 ABC transporter AWH56_016975 PF00664 ABC transporter transmembrane region AWH56_016980 PF05670 NFACT protein RNA binding domain AWH56_016985 PF00690 Cation transporter/ATPase, N-terminus AWH56_016985 PF00689 Cation transporting ATPase, C-terminus AWH56_016990 PF08340 Domain of unknown function (DUF1732) AWH56_016990 PF03755 YicC-like family, N-terminal region AWH56_016995 PF04025 Domain of unknown function (DUF370) AWH56_017000 PF00625 Guanylate kinase AWH56_017005 PF01192 RNA polymerase Rpb6 AWH56_017010 PF02441 Flavoprotein AWH56_017010 PF04127 DNA / pantothenate metabolism flavoprotein AWH56_017015 PF04851 Type III restriction enzyme, res subunit AWH56_017015 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AWH56_017015 PF18074 Primosomal protein N C-terminal domain AWH56_017015 PF17764 3′ DNA-binding domain (3′BD) AWH56_017015 PF00271 Helicase conserved C-terminal domain AWH56_017025 PF02911 Formyl transferase, C-terminal domain AWH56_017025 PF00551 Formyl transferase AWH56_017030 PF01189 16S rRNA methyltransferase RsmB/F AWH56_017030 PF01029 NusB family AWH56_017035 PF04055 Radical SAM superfamily AWH56_017045 PF00069 Protein kinase domain AWH56_017045 PF03793 PASTA domain AWH56_017050 PF03193 RsgA GTPase AWH56_017050 PF16745 RsgA N-terminal domain AWH56_017055 PF00834 Ribulose-phosphate 3 epimerase family AWH56_017060 PF09515 Thiamine transporter protein (Thia_YuaJ) AWH56_017065 PF04263 Thiamin pyrophosphokinase, catalytic domain AWH56_017065 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain AWH56_017070 PF08183 Stage V sporulation protein family AWH56_017075 PF00830 Ribosomal L28 family AWH56_017080 PF03780 Asp23 family, cell envelope-related function AWH56_017085 PF13684 Dihydroxyacetone kinase family AWH56_017085 PF02734 DAK2 domain AWH56_017090 PF02645 Uncharacterised protein, DegV family COG1307 AWH56_017095 PF01842 ACT domain AWH56_017095 PF03315 Serine dehydratase beta chain AWH56_017100 PF03313 Serine dehydratase alpha chain AWH56_017105 PF17191 RecG wedge domain AWH56_017105 PF00271 Helicase conserved C-terminal domain AWH56_017105 PF00270 DEAD/DEAH box helicase AWH56_017110 PF03061 Thioesterase superfamily AWH56_017115 PF02504 Fatty acid synthesis protein AWH56_017120 PF00698 Acyl transferase domain AWH56_017130 PF00550 Phosphopantetheine attachment site AWH56_017135 PF14622 Ribonuclease-III-like AWH56_017135 PF00035 Double-stranded RNA binding motif AWH56_017140 PF06569 Protein of unknown function (DUF1128) AWH56_017145 PF02463 RecF/RecN/SMC N terminal domain AWH56_017145 PF06470 SMC proteins Flexible Hinge Domain AWH56_017150 PF02881 SRP54-type protein, helical bundle domain AWH56_017150 PF00448 SRP54-type protein, GTPase domain AWH56_017155 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AWH56_017160 PF02881 SRP54-type protein, helical bundle domain AWH56_017160 PF02978 Signal peptide binding domain AWH56_017160 PF00448 SRP54-type protein, GTPase domain AWH56_017165 PF00886 Ribosomal protein S16 AWH56_017180 PF01782 RimM N-terminal domain AWH56_017180 PF05239 PRC-barrel domain AWH56_017185 PF01746 tRNA (Guanine-1)-methyltransferase AWH56_017190 PF01245 Ribosomal protein L19 AWH56_017195 PF10502 Signal peptidase, peptidase S26 AWH56_017200 PF01926 50S ribosome-binding GTPase AWH56_017205 PF01351 Ribonuclease HII AWH56_017215 PF01312 FlhB HrpN YscU SpaS Family AWH56_017230 PF08442 ATP-grasp domain AWH56_017230 PF00549 CoA-ligase AWH56_017235 PF02629 CoA binding domain AWH56_017235 PF00549 CoA-ligase AWH56_017240 PF02481 DNA recombination-mediator protein A AWH56_017245 PF01751 Toprim domain AWH56_017245 PF01131 DNA topoisomerase AWH56_017245 PF01396 Topoisomerase DNA binding C4 zinc finger AWH56_017250 PF01134 Glucose inhibited division protein A AWH56_017255 PF00589 Phage integrase family AWH56_017255 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_017260 PF00227 Proteasome subunit AWH56_017265 PF10431 C-terminal, D2-small domain, of ClpB protein AWH56_017265 PF07724 AAA domain (Cdc48 subfamily) AWH56_017265 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_017270 PF06018 CodY GAF-like domain AWH56_017270 PF08222 CodY helix-turn-helix domain AWH56_017275 PF00460 Flagella basal body rod protein AWH56_017280 PF00460 Flagella basal body rod protein AWH56_017280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AWH56_017285 PF02049 Flagellar hook-basal body complex protein FliE AWH56_017290 PF01514 Secretory protein of YscJ/FliF family AWH56_017290 PF08345 Flagellar M-ring protein C-terminal AWH56_017295 PF14842 FliG N-terminal domain AWH56_017295 PF01706 FliG C-terminal domain AWH56_017295 PF14841 FliG middle domain AWH56_017300 PF02108 Flagellar assembly protein FliH AWH56_017305 PF02874 ATP synthase alpha/beta family, beta-barrel domain AWH56_017305 PF18269 T3SS EscN ATPase C-terminal domain AWH56_017305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AWH56_017325 PF03963 Flagellar hook capping protein - N-terminal region AWH56_017335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AWH56_017335 PF07559 Flagellar basal body protein FlaE AWH56_017335 PF00460 Flagella basal body rod protein AWH56_017340 PF06289 Flagellar and Swarming motility proteins AWH56_017345 PF03748 Flagellar basal body-associated protein FliL AWH56_017350 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AWH56_017350 PF02154 Flagellar motor switch protein FliM AWH56_017355 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AWH56_017355 PF04509 CheC-like family AWH56_017360 PF00072 Response regulator receiver domain AWH56_017365 PF04347 Flagellar biosynthesis protein, FliO AWH56_017370 PF00813 FliP family AWH56_017375 PF01313 Bacterial export proteins, family 3 AWH56_017380 PF01311 Bacterial export proteins, family 1 AWH56_017385 PF01312 FlhB HrpN YscU SpaS Family AWH56_017405 PF00771 FHIPEP family AWH56_017410 PF00448 SRP54-type protein, GTPase domain AWH56_017415 PF10609 NUBPL iron-transfer P-loop NTPase AWH56_017420 PF01339 CheB methylesterase AWH56_017420 PF00072 Response regulator receiver domain AWH56_017425 PF07194 P2 response regulator binding domain AWH56_017425 PF01584 CheW-like domain AWH56_017425 PF01627 Hpt domain AWH56_017425 PF02895 Signal transducing histidine kinase, homodimeric domain AWH56_017425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_017430 PF01584 CheW-like domain AWH56_017435 PF04509 CheC-like family AWH56_017440 PF03975 CheD chemotactic sensory transduction AWH56_017450 PF04545 Sigma-70, region 4 AWH56_017450 PF04542 Sigma-70 region 2 AWH56_017450 PF04539 Sigma-70 region 3 AWH56_017470 PF00318 Ribosomal protein S2 AWH56_017475 PF00889 Elongation factor TS AWH56_017480 PF00696 Amino acid kinase family AWH56_017485 PF01765 Ribosome recycling factor AWH56_017490 PF01255 Putative undecaprenyl diphosphate synthase AWH56_017500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AWH56_017500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AWH56_017500 PF13288 DXP reductoisomerase C-terminal domain AWH56_017505 PF02163 Peptidase family M50 AWH56_017505 PF17820 PDZ domain AWH56_017510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AWH56_017510 PF04073 Aminoacyl-tRNA editing domain AWH56_017510 PF03129 Anticodon binding domain AWH56_017515 PF13610 DDE domain AWH56_017520 PF00929 Exonuclease AWH56_017520 PF14480 DNA polymerase III polC-type N-terminus I AWH56_017520 PF14579 Helix-hairpin-helix motif AWH56_017520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AWH56_017520 PF07733 Bacterial DNA polymerase III alpha NTPase domain AWH56_017520 PF02811 PHP domain AWH56_017520 PF11490 DNA polymerase III polC-type N-terminus II AWH56_017525 PF17384 RimP C-terminal SH3 domain AWH56_017525 PF02576 RimP N-terminal domain AWH56_017530 PF08529 NusA N-terminal domain AWH56_017530 PF13184 NusA-like KH domain AWH56_017530 PF00575 S1 RNA binding domain AWH56_017535 PF04296 Protein of unknown function (DUF448) AWH56_017540 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AWH56_017545 PF00009 Elongation factor Tu GTP binding domain AWH56_017545 PF04760 Translation initiation factor IF-2, N-terminal region AWH56_017545 PF11987 Translation-initiation factor 2 AWH56_017555 PF02033 Ribosome-binding factor A AWH56_017560 PF01509 TruB family pseudouridylate synthase (N terminal domain) AWH56_017560 PF16198 tRNA pseudouridylate synthase B C-terminal domain AWH56_017565 PF01687 Riboflavin kinase AWH56_017565 PF06574 FAD synthetase AWH56_017570 PF00312 Ribosomal protein S15 AWH56_017575 PF00575 S1 RNA binding domain AWH56_017575 PF03725 3' exoribonuclease family, domain 2 AWH56_017575 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AWH56_017575 PF00013 KH domain AWH56_017575 PF01138 3' exoribonuclease family, domain 1 AWH56_017580 PF01522 Polysaccharide deacetylase AWH56_017585 PF00675 Insulinase (Peptidase family M16) AWH56_017585 PF05193 Peptidase M16 inactive domain AWH56_017590 PF05239 PRC-barrel domain AWH56_017595 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AWH56_017595 PF16924 Dipicolinate synthase subunit A N-terminal domain AWH56_017600 PF02441 Flavoprotein AWH56_017605 PF02774 Semialdehyde dehydrogenase, dimerisation domain AWH56_017605 PF01118 Semialdehyde dehydrogenase, NAD binding domain AWH56_017610 PF00696 Amino acid kinase family AWH56_017610 PF13840 ACT domain AWH56_017615 PF00701 Dihydrodipicolinate synthetase family AWH56_017620 PF17770 Ribonuclease J C-terminal domain AWH56_017620 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AWH56_017620 PF00753 Metallo-beta-lactamase superfamily AWH56_017625 PF00574 Clp protease AWH56_017630 PF14035 YlzJ-like protein AWH56_017635 PF17854 FtsK alpha domain AWH56_017635 PF09397 Ftsk gamma domain AWH56_017635 PF01580 FtsK/SpoIIIE family AWH56_017640 PF07702 UTRA domain AWH56_017640 PF00392 Bacterial regulatory proteins, gntR family AWH56_017645 PF05193 Peptidase M16 inactive domain AWH56_017650 PF00675 Insulinase (Peptidase family M16) AWH56_017650 PF05193 Peptidase M16 inactive domain AWH56_017660 PF11588 Protein of unknown function (DUF3243) AWH56_017665 PF11868 Protein of unknown function (DUF3388) AWH56_017670 PF13464 Domain of unknown function (DUF4115) AWH56_017675 PF04461 Protein of unknown function (DUF520) AWH56_017680 PF01066 CDP-alcohol phosphatidyltransferase AWH56_017685 PF18146 Damage-inducible protein CinA KH domain AWH56_017685 PF02464 Competence-damaged protein AWH56_017685 PF00994 Probable molybdopterin binding domain AWH56_017690 PF00270 DEAD/DEAH box helicase AWH56_017690 PF00271 Helicase conserved C-terminal domain AWH56_017695 PF00154 recA bacterial DNA recombination protein AWH56_017700 PF12072 Domain of unknown function (DUF3552) AWH56_017700 PF01966 HD domain AWH56_017700 PF00013 KH domain AWH56_017705 PF13277 YmdB-like protein AWH56_017710 PF04232 Stage V sporulation protein S (SpoVS) AWH56_017715 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AWH56_017715 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AWH56_017715 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AWH56_017720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AWH56_017725 PF00919 Uncharacterized protein family UPF0004 AWH56_017725 PF01938 TRAM domain AWH56_017725 PF04055 Radical SAM superfamily AWH56_017730 PF06133 Control of competence regulator ComK, YlbF/YmcA AWH56_017735 PF10628 Outer spore coat protein E (CotE) AWH56_017745 PF01624 MutS domain I AWH56_017745 PF00488 MutS domain V AWH56_017745 PF05192 MutS domain III AWH56_017745 PF05188 MutS domain II AWH56_017745 PF05190 MutS family domain IV AWH56_017750 PF08676 MutL C terminal dimerisation domain AWH56_017750 PF01119 DNA mismatch repair protein, C-terminal domain AWH56_017755 PF04445 Putative SAM-dependent methyltransferase AWH56_017765 PF17209 Hfq protein AWH56_017775 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_017775 PF17866 AAA lid domain AWH56_017780 PF13167 GTP-binding GTPase N-terminal AWH56_017780 PF16360 GTP-binding GTPase Middle Region AWH56_017780 PF01926 50S ribosome-binding GTPase AWH56_017785 PF06838 Methionine gamma-lyase AWH56_017790 PF13411 MerR HTH family regulatory protein AWH56_017795 PF03951 Glutamine synthetase, beta-Grasp domain AWH56_017795 PF00120 Glutamine synthetase, catalytic domain AWH56_017800 PF01726 LexA DNA binding domain AWH56_017800 PF00717 Peptidase S24-like AWH56_017810 PF00239 Resolvase, N terminal domain AWH56_017815 PF05979 Bacterial protein of unknown function (DUF896) AWH56_017820 PF02780 Transketolase, C-terminal domain AWH56_017820 PF00456 Transketolase, thiamine diphosphate binding domain AWH56_017820 PF02779 Transketolase, pyrimidine binding domain AWH56_017825 PF10747 Sporulation inhibitor of replication protein SirA AWH56_017830 PF03672 Uncharacterised protein family (UPF0154) AWH56_017835 PF00581 Rhodanese-like domain AWH56_017840 PF00005 ABC transporter AWH56_017840 PF00664 ABC transporter transmembrane region AWH56_017845 PF00005 ABC transporter AWH56_017845 PF00664 ABC transporter transmembrane region AWH56_017850 PF02583 Metal-sensitive transcriptional repressor AWH56_017855 PF00403 Heavy-metal-associated domain AWH56_017860 PF00403 Heavy-metal-associated domain AWH56_017865 PF00578 AhpC/TSA family AWH56_017875 PF07301 Protein of unknown function (DUF1453) AWH56_017880 PF11084 Protein of unknown function (DUF2621) AWH56_017885 PF01053 Cys/Met metabolism PLP-dependent enzyme AWH56_017890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AWH56_017890 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AWH56_017895 PF04199 Putative cyclase AWH56_017900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AWH56_017900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AWH56_017930 PF07690 Major Facilitator Superfamily AWH56_017935 PF07486 Cell Wall Hydrolase AWH56_017940 PF09671 Spore coat protein (Spore_GerQ) AWH56_017975 PF00209 Sodium:neurotransmitter symporter family AWH56_017985 PF12833 Helix-turn-helix domain AWH56_017985 PF02805 Metal binding domain of Ada AWH56_017990 PF00892 EamA-like transporter family AWH56_017995 PF00355 Rieske [2Fe-2S] domain AWH56_018015 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_018025 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_018030 PF01425 Amidase AWH56_018035 PF00171 Aldehyde dehydrogenase family AWH56_018040 PF01557 Fumarylacetoacetate (FAA) hydrolase family AWH56_018045 PF01118 Semialdehyde dehydrogenase, NAD binding domain AWH56_018045 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AWH56_018050 PF07836 DmpG-like communication domain AWH56_018050 PF00682 HMGL-like AWH56_018060 PF01361 Tautomerase enzyme AWH56_018065 PF00158 Sigma-54 interaction domain AWH56_018065 PF02954 Bacterial regulatory protein, Fis family AWH56_018065 PF02830 V4R domain AWH56_018065 PF06505 Activator of aromatic catabolism AWH56_018070 PF09339 IclR helix-turn-helix domain AWH56_018070 PF01614 Bacterial transcriptional regulator AWH56_018075 PF01613 Flavin reductase like domain AWH56_018080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AWH56_018085 PF03928 Haem-degrading AWH56_018090 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AWH56_018110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AWH56_018110 PF01348 Type II intron maturase AWH56_018165 PF01695 IstB-like ATP binding protein AWH56_018170 PF00665 Integrase core domain AWH56_018195 PF03551 Transcriptional regulator PadR-like family AWH56_018425 PF01348 Type II intron maturase AWH56_018425 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AWH56_018450 PF00583 Acetyltransferase (GNAT) family AWH56_018450 PF00814 Glycoprotease family AWH56_018465 PF00665 Integrase core domain AWH56_018470 PF01695 IstB-like ATP binding protein AWH56_018485 PF01230 HIT domain AWH56_018520 PF00665 Integrase core domain AWH56_018520 PF02796 Helix-turn-helix domain of resolvase AWH56_018530 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_018530 PF00589 Phage integrase family AWH56_018535 PF00589 Phage integrase family AWH56_018540 PF00589 Phage integrase family AWH56_018540 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_018595 PF07508 Recombinase AWH56_018595 PF00239 Resolvase, N terminal domain AWH56_018595 PF13408 Recombinase zinc beta ribbon domain AWH56_018680 PF08281 Sigma-70, region 4 AWH56_018680 PF04542 Sigma-70 region 2 AWH56_018745 PF13817 IS66 C-terminal element AWH56_018745 PF03050 Transposase IS66 family AWH56_018745 PF13005 zinc-finger binding domain of transposase IS66 AWH56_018745 PF13007 Transposase C of IS166 homeodomain AWH56_018765 PF00583 Acetyltransferase (GNAT) family AWH56_018770 PF13610 DDE domain AWH56_018820 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_018820 PF00589 Phage integrase family AWH56_018825 PF00589 Phage integrase family AWH56_018830 PF00589 Phage integrase family AWH56_018830 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_018840 PF02796 Helix-turn-helix domain of resolvase AWH56_018840 PF00665 Integrase core domain AWH56_018925 PF01926 50S ribosome-binding GTPase AWH56_018925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AWH56_018940 PF01695 IstB-like ATP binding protein AWH56_018950 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_018950 PF00589 Phage integrase family AWH56_018960 PF03471 Transporter associated domain AWH56_018960 PF01595 Cyclin M transmembrane N-terminal domain AWH56_018960 PF00571 CBS domain AWH56_018965 PF09107 Elongation factor SelB, winged helix AWH56_018965 PF09106 Elongation factor SelB, winged helix AWH56_018965 PF03144 Elongation factor Tu domain 2 AWH56_018965 PF00009 Elongation factor Tu GTP binding domain AWH56_018965 PF09105 Elongation factor SelB, winged helix AWH56_018975 PF00005 ABC transporter AWH56_018975 PF03466 LysR substrate binding domain AWH56_018995 PF12390 Selenocysteine synthase N terminal AWH56_018995 PF03841 L-seryl-tRNA selenium transferase AWH56_019000 PF08179 Small acid-soluble spore protein P family AWH56_019015 PF00330 Aconitase family (aconitate hydratase) AWH56_019015 PF00694 Aconitase C-terminal domain AWH56_019030 PF04239 Protein of unknown function (DUF421) AWH56_019040 PF08177 Small acid-soluble spore protein N family AWH56_019050 PF02735 Ku70/Ku80 beta-barrel domain AWH56_019060 PF09335 SNARE associated Golgi protein AWH56_019075 PF00892 EamA-like transporter family AWH56_019085 PF00004 ATPase family associated with various cellular activities (AAA) AWH56_019085 PF17866 AAA lid domain AWH56_019090 PF03061 Thioesterase superfamily AWH56_019100 PF02540 NAD synthase AWH56_019105 PF02811 PHP domain AWH56_019110 PF13456 Reverse transcriptase-like AWH56_019115 PF04204 Homoserine O-succinyltransferase AWH56_019125 PF01869 BadF/BadG/BcrA/BcrD ATPase family AWH56_019140 PF10388 EAL-domain associated signalling protein domain AWH56_019140 PF00563 EAL domain AWH56_019150 PF04011 LemA family AWH56_019155 PF01435 Peptidase family M48 AWH56_019160 PF00672 HAMP domain AWH56_019160 PF17202 Single cache domain 3 AWH56_019160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_019175 PF14183 YwpF-like protein AWH56_019190 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AWH56_019195 PF00128 Alpha amylase, catalytic domain AWH56_019195 PF11941 Domain of unknown function (DUF3459) AWH56_019200 PF00005 ABC transporter AWH56_019205 PF12679 ABC-2 family transporter protein AWH56_019210 PF00392 Bacterial regulatory proteins, gntR family AWH56_019215 PF00005 ABC transporter AWH56_019230 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_019230 PF00585 C-terminal regulatory domain of Threonine dehydratase AWH56_019240 PF01584 CheW-like domain AWH56_019240 PF00072 Response regulator receiver domain AWH56_019250 PF02681 Divergent PAP2 family AWH56_019255 PF03063 Prismane/CO dehydrogenase family AWH56_019265 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AWH56_019265 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AWH56_019270 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AWH56_019275 PF01966 HD domain AWH56_019280 PF01476 LysM domain AWH56_019280 PF00877 NlpC/P60 family AWH56_019290 PF07690 Major Facilitator Superfamily AWH56_019305 PF13610 DDE domain AWH56_019335 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_019350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_019350 PF00512 His Kinase A (phospho-acceptor) domain AWH56_019350 PF00989 PAS fold AWH56_019365 PF00270 DEAD/DEAH box helicase AWH56_019365 PF09369 Domain of unknown function (DUF1998) AWH56_019365 PF00271 Helicase conserved C-terminal domain AWH56_019370 PF13482 RNase_H superfamily AWH56_019375 PF00350 Dynamin family AWH56_019380 PF00571 CBS domain AWH56_019380 PF01743 Poly A polymerase head domain AWH56_019385 PF11490 DNA polymerase III polC-type N-terminus II AWH56_019385 PF14480 DNA polymerase III polC-type N-terminus I AWH56_019385 PF00929 Exonuclease AWH56_019385 PF02811 PHP domain AWH56_019385 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AWH56_019385 PF07733 Bacterial DNA polymerase III alpha NTPase domain AWH56_019400 PF06908 YspA SLOG family AWH56_019405 PF05103 DivIVA protein AWH56_019410 PF13456 Reverse transcriptase-like AWH56_019420 PF01170 Putative RNA methylase family UPF0020 AWH56_019420 PF02926 THUMP domain AWH56_019435 PF13307 Helicase C-terminal domain AWH56_019440 PF04055 Radical SAM superfamily AWH56_019440 PF06463 Molybdenum Cofactor Synthesis C AWH56_019445 PF01575 MaoC like domain AWH56_019475 PF00561 alpha/beta hydrolase fold AWH56_019485 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AWH56_019490 PF04308 Ribonuclease H-like AWH56_019495 PF07730 Histidine kinase AWH56_019500 PF00072 Response regulator receiver domain AWH56_019500 PF00196 Bacterial regulatory proteins, luxR family AWH56_019510 PF00005 ABC transporter AWH56_019525 PF09587 Bacterial capsule synthesis protein PGA_cap AWH56_019530 PF03009 Glycerophosphoryl diester phosphodiesterase family AWH56_019535 PF00108 Thiolase, N-terminal domain AWH56_019535 PF02803 Thiolase, C-terminal domain AWH56_019545 PF02803 Thiolase, C-terminal domain AWH56_019545 PF00108 Thiolase, N-terminal domain AWH56_019550 PF00704 Glycosyl hydrolases family 18 AWH56_019555 PF13380 CoA binding domain AWH56_019560 PF01751 Toprim domain AWH56_019560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_019560 PF00986 DNA gyrase B subunit, carboxyl terminus AWH56_019560 PF00204 DNA gyrase B AWH56_019565 PF03989 DNA gyrase C-terminal domain, beta-propeller AWH56_019565 PF00521 DNA gyrase/topoisomerase IV, subunit A AWH56_019570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AWH56_019600 PF02719 Polysaccharide biosynthesis protein AWH56_019605 PF00483 Nucleotidyl transferase AWH56_019610 PF02397 Bacterial sugar transferase AWH56_019615 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AWH56_019625 PF03023 Lipid II flippase MurJ AWH56_019630 PF04230 Polysaccharide pyruvyl transferase AWH56_019635 PF13807 G-rich domain on putative tyrosine kinase AWH56_019635 PF02706 Chain length determinant protein AWH56_019640 PF13614 AAA domain AWH56_019645 PF13439 Glycosyltransferase Family 4 AWH56_019645 PF00534 Glycosyl transferases group 1 AWH56_019660 PF01820 D-ala D-ala ligase N-terminus AWH56_019660 PF07478 D-ala D-ala ligase C-terminus AWH56_019665 PF16363 GDP-mannose 4,6 dehydratase AWH56_019670 PF00589 Phage integrase family AWH56_019670 PF13495 Phage integrase, N-terminal SAM-like domain AWH56_019675 PF01435 Peptidase family M48 AWH56_019680 PF06271 RDD family AWH56_019690 PF07995 Glucose / Sorbosone dehydrogenase AWH56_019700 PF03575 Peptidase family S51 AWH56_019705 PF08281 Sigma-70, region 4 AWH56_019705 PF04542 Sigma-70 region 2 AWH56_019710 PF01476 LysM domain AWH56_019710 PF00246 Zinc carboxypeptidase AWH56_019720 PF18389 TrmO C-terminal domain AWH56_019720 PF01980 tRNA-methyltransferase O AWH56_019735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AWH56_019735 PF03466 LysR substrate binding domain AWH56_019740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_019760 PF08338 Domain of unknown function (DUF1731) AWH56_019760 PF01370 NAD dependent epimerase/dehydratase family AWH56_019765 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AWH56_019765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AWH56_019770 PF08439 Oligopeptidase F AWH56_019770 PF01432 Peptidase family M3 AWH56_019780 PF01593 Flavin containing amine oxidoreductase AWH56_019805 PF02308 MgtC family AWH56_019810 PF01966 HD domain AWH56_019825 PF00701 Dihydrodipicolinate synthetase family AWH56_019840 PF00171 Aldehyde dehydrogenase family AWH56_019845 PF00202 Aminotransferase class-III AWH56_019850 PF07687 Peptidase dimerisation domain AWH56_019850 PF01546 Peptidase family M20/M25/M40 AWH56_019855 PF01144 Coenzyme A transferase AWH56_019860 PF01144 Coenzyme A transferase AWH56_019865 PF00202 Aminotransferase class-III AWH56_019880 PF12544 Lysine-2,3-aminomutase AWH56_019885 PF13426 PAS domain AWH56_019885 PF02954 Bacterial regulatory protein, Fis family AWH56_019885 PF00158 Sigma-54 interaction domain AWH56_019915 PF03109 ABC1 family AWH56_019920 PF00583 Acetyltransferase (GNAT) family AWH56_019930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AWH56_019935 PF00109 Beta-ketoacyl synthase, N-terminal domain AWH56_019935 PF02801 Beta-ketoacyl synthase, C-terminal domain AWH56_019940 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AWH56_019940 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AWH56_019950 PF03734 L,D-transpeptidase catalytic domain AWH56_019950 PF01476 LysM domain AWH56_019960 PF04238 Protein of unknown function (DUF420) AWH56_019975 PF00989 PAS fold AWH56_019975 PF00512 His Kinase A (phospho-acceptor) domain AWH56_019975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_020005 PF08712 Scaffold protein Nfu/NifU N terminal AWH56_020005 PF13769 Virulence factor AWH56_020020 PF01370 NAD dependent epimerase/dehydratase family AWH56_020080 PF02245 Methylpurine-DNA glycosylase (MPG) AWH56_020090 PF13419 Haloacid dehalogenase-like hydrolase AWH56_020100 PF17334 Minor curli fiber component A AWH56_020105 PF17340 Family of unknown function (DUF5370) AWH56_020170 PF01464 Transglycosylase SLT domain AWH56_020170 PF10145 Phage-related minor tail protein AWH56_020170 PF01551 Peptidase family M23 AWH56_020195 PF03553 Na+/H+ antiporter family AWH56_020200 PF01476 LysM domain AWH56_020200 PF00877 NlpC/P60 family AWH56_020215 PF12679 ABC-2 family transporter protein AWH56_020220 PF00005 ABC transporter AWH56_020225 PF13472 GDSL-like Lipase/Acylhydrolase family AWH56_020250 PF00704 Glycosyl hydrolases family 18 AWH56_020250 PF01476 LysM domain AWH56_020260 PF00990 Diguanylate cyclase, GGDEF domain AWH56_020260 PF00563 EAL domain AWH56_020260 PF13426 PAS domain AWH56_020265 PF09084 NMT1/THI5 like AWH56_020270 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_020275 PF00005 ABC transporter AWH56_020280 PF03070 TENA/THI-4/PQQC family AWH56_020295 PF04294 VanW like protein AWH56_020310 PF02086 D12 class N6 adenine-specific DNA methyltransferase AWH56_020315 PF00082 Subtilase family AWH56_020315 PF05922 Peptidase inhibitor I9 AWH56_020325 PF04346 Ethanolamine utilisation protein, EutH AWH56_020335 PF01797 Transposase IS200 like AWH56_020340 PF02675 S-adenosylmethionine decarboxylase AWH56_020355 PF03741 Integral membrane protein TerC family AWH56_020375 PF07457 Protein of unknown function (DUF1516) AWH56_020390 PF07690 Major Facilitator Superfamily AWH56_020420 PF02386 Cation transport protein AWH56_020425 PF02080 TrkA-C domain AWH56_020425 PF02254 TrkA-N domain AWH56_020440 PF01523 Putative modulator of DNA gyrase AWH56_020445 PF01523 Putative modulator of DNA gyrase AWH56_020450 PF05145 Transition state regulatory protein AbrB AWH56_020460 PF01758 Sodium Bile acid symporter family AWH56_020465 PF00042 Globin AWH56_020465 PF00175 Oxidoreductase NAD-binding domain AWH56_020465 PF00970 Oxidoreductase FAD-binding domain AWH56_020470 PF02082 Transcriptional regulator AWH56_020485 PF01695 IstB-like ATP binding protein AWH56_020495 PF04405 Domain of Unknown function (DUF542) AWH56_020495 PF01814 Hemerythrin HHE cation binding domain AWH56_020550 PF00296 Luciferase-like monooxygenase AWH56_020560 PF00561 alpha/beta hydrolase fold AWH56_020575 PF00005 ABC transporter AWH56_020580 PF00293 NUDIX domain AWH56_020615 PF00990 Diguanylate cyclase, GGDEF domain AWH56_020615 PF03707 Bacterial signalling protein N terminal repeat AWH56_020615 PF00563 EAL domain AWH56_020655 PF07722 Peptidase C26 AWH56_020675 PF00005 ABC transporter AWH56_020685 PF04542 Sigma-70 region 2 AWH56_020685 PF08281 Sigma-70, region 4 AWH56_020715 PF01699 Sodium/calcium exchanger protein AWH56_020730 PF01751 Toprim domain AWH56_020765 PF00665 Integrase core domain AWH56_020770 PF01695 IstB-like ATP binding protein AWH56_020795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AWH56_020795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AWH56_020835 PF13610 DDE domain AWH56_020865 PF02796 Helix-turn-helix domain of resolvase AWH56_020865 PF00239 Resolvase, N terminal domain AWH56_020870 PF13700 Domain of unknown function (DUF4158) AWH56_020870 PF01526 Tn3 transposase DDE domain AWH56_020890 PF00176 SNF2 family N-terminal domain AWH56_020890 PF00271 Helicase conserved C-terminal domain AWH56_020890 PF12419 SNF2 Helicase protein AWH56_020895 PF00313 'Cold-shock' DNA-binding domain AWH56_020905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_020905 PF00512 His Kinase A (phospho-acceptor) domain AWH56_020915 PF07690 Major Facilitator Superfamily AWH56_020920 PF03009 Glycerophosphoryl diester phosphodiesterase family AWH56_020940 PF03880 DbpA RNA binding domain AWH56_020940 PF00271 Helicase conserved C-terminal domain AWH56_020940 PF00270 DEAD/DEAH box helicase AWH56_020955 PF01609 Transposase DDE domain AWH56_020960 PF01610 Transposase AWH56_020960 PF13542 Helix-turn-helix domain of transposase family ISL3 AWH56_020960 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AWH56_020965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AWH56_020965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AWH56_020980 PF05343 M42 glutamyl aminopeptidase AWH56_020990 PF04951 D-aminopeptidase AWH56_020995 PF00072 Response regulator receiver domain AWH56_020995 PF01339 CheB methylesterase AWH56_021000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_021000 PF00512 His Kinase A (phospho-acceptor) domain AWH56_021000 PF00989 PAS fold AWH56_021005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_021005 PF00005 ABC transporter AWH56_021010 PF00005 ABC transporter AWH56_021010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_021015 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_021015 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_021020 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_021025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AWH56_021035 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_021040 PF07690 Major Facilitator Superfamily AWH56_021045 PF02566 OsmC-like protein AWH56_021060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AWH56_021060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AWH56_021060 PF01842 ACT domain AWH56_021070 PF10609 NUBPL iron-transfer P-loop NTPase AWH56_021090 PF12800 4Fe-4S binding domain AWH56_021090 PF13247 4Fe-4S dicluster domain AWH56_021095 PF01568 Molydopterin dinucleotide binding domain AWH56_021095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_021095 PF00384 Molybdopterin oxidoreductase AWH56_021105 PF03631 Virulence factor BrkB AWH56_021130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AWH56_021140 PF01329 Pterin 4 alpha carbinolamine dehydratase AWH56_021145 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AWH56_021150 PF00691 OmpA family AWH56_021150 PF01389 OmpA-like transmembrane domain AWH56_021170 PF13614 AAA domain AWH56_021180 PF04235 Protein of unknown function (DUF418) AWH56_021190 PF13180 PDZ domain AWH56_021235 PF04851 Type III restriction enzyme, res subunit AWH56_021235 PF13307 Helicase C-terminal domain AWH56_021235 PF00929 Exonuclease AWH56_021240 PF00563 EAL domain AWH56_021240 PF00990 Diguanylate cyclase, GGDEF domain AWH56_021240 PF03707 Bacterial signalling protein N terminal repeat AWH56_021250 PF00248 Aldo/keto reductase family AWH56_021255 PF02630 SCO1/SenC AWH56_021295 PF13302 Acetyltransferase (GNAT) domain AWH56_021310 PF13378 Enolase C-terminal domain-like AWH56_021310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AWH56_021320 PF07670 Nucleoside recognition AWH56_021350 PF07929 Plasmid pRiA4b ORF-3-like protein AWH56_021355 PF00753 Metallo-beta-lactamase superfamily AWH56_021365 PF00664 ABC transporter transmembrane region AWH56_021365 PF00005 ABC transporter AWH56_021400 PF01554 MatE AWH56_021450 PF00005 ABC transporter AWH56_021455 PF02687 FtsX-like permease family AWH56_021470 PF01272 Transcription elongation factor, GreA/GreB, C-term AWH56_021470 PF03449 Transcription elongation factor, N-terminal AWH56_021485 PF16363 GDP-mannose 4,6 dehydratase AWH56_021495 PF00483 Nucleotidyl transferase AWH56_021520 PF14310 Fibronectin type III-like domain AWH56_021520 PF00933 Glycosyl hydrolase family 3 N terminal domain AWH56_021520 PF01915 Glycosyl hydrolase family 3 C-terminal domain AWH56_021525 PF00933 Glycosyl hydrolase family 3 N terminal domain AWH56_021525 PF14310 Fibronectin type III-like domain AWH56_021525 PF01915 Glycosyl hydrolase family 3 C-terminal domain AWH56_021535 PF00072 Response regulator receiver domain AWH56_021535 PF00486 Transcriptional regulatory protein, C terminal AWH56_021540 PF03275 UDP-galactopyranose mutase AWH56_021560 PF00005 ABC transporter AWH56_021595 PF00583 Acetyltransferase (GNAT) family AWH56_021595 PF01047 MarR family AWH56_021600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AWH56_021605 PF01554 MatE AWH56_021640 PF11188 Protein of unknown function (DUF2975) AWH56_021645 PF13443 Cro/C1-type HTH DNA-binding domain AWH56_021655 PF01152 Bacterial-like globin AWH56_021670 PF12833 Helix-turn-helix domain AWH56_021670 PF06445 GyrI-like small molecule binding domain AWH56_021680 PF02589 LUD domain AWH56_021685 PF11870 Domain of unknown function (DUF3390) AWH56_021685 PF13183 4Fe-4S dicluster domain AWH56_021685 PF02589 LUD domain AWH56_021690 PF02754 Cysteine-rich domain AWH56_021710 PF01641 SelR domain AWH56_021715 PF03466 LysR substrate binding domain AWH56_021715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AWH56_021720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AWH56_021720 PF03466 LysR substrate binding domain AWH56_021725 PF04474 Protein of unknown function (DUF554) AWH56_021730 PF13411 MerR HTH family regulatory protein AWH56_021730 PF06445 GyrI-like small molecule binding domain AWH56_021740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AWH56_021745 PF07681 DoxX AWH56_021760 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AWH56_021760 PF00925 GTP cyclohydrolase II AWH56_021765 PF13302 Acetyltransferase (GNAT) domain AWH56_021790 PF06445 GyrI-like small molecule binding domain AWH56_021790 PF12833 Helix-turn-helix domain AWH56_021840 PF00271 Helicase conserved C-terminal domain AWH56_021840 PF04851 Type III restriction enzyme, res subunit AWH56_021850 PF01230 HIT domain AWH56_021855 PF00271 Helicase conserved C-terminal domain AWH56_021855 PF08494 DEAD/H associated AWH56_021855 PF00270 DEAD/DEAH box helicase AWH56_021870 PF04851 Type III restriction enzyme, res subunit AWH56_021870 PF00271 Helicase conserved C-terminal domain AWH56_021875 PF07690 Major Facilitator Superfamily AWH56_021880 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AWH56_021885 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AWH56_021890 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_021900 PF17853 GGDEF-like domain AWH56_021900 PF13556 PucR C-terminal helix-turn-helix domain AWH56_021915 PF01979 Amidohydrolase family AWH56_021935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_021935 PF00512 His Kinase A (phospho-acceptor) domain AWH56_021940 PF00486 Transcriptional regulatory protein, C terminal AWH56_021940 PF00072 Response regulator receiver domain AWH56_021980 PF01734 Patatin-like phospholipase AWH56_021985 PF00990 Diguanylate cyclase, GGDEF domain AWH56_021985 PF13188 PAS domain AWH56_021985 PF00563 EAL domain AWH56_021985 PF03707 Bacterial signalling protein N terminal repeat AWH56_022025 PF00196 Bacterial regulatory proteins, luxR family AWH56_022025 PF00072 Response regulator receiver domain AWH56_022035 PF07730 Histidine kinase AWH56_022040 PF00005 ABC transporter AWH56_022065 PF00144 Beta-lactamase AWH56_022120 PF02810 SEC-C motif AWH56_022130 PF00512 His Kinase A (phospho-acceptor) domain AWH56_022130 PF13426 PAS domain AWH56_022130 PF13188 PAS domain AWH56_022130 PF00989 PAS fold AWH56_022130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_022140 PF00881 Nitroreductase family AWH56_022150 PF06803 Protein of unknown function (DUF1232) AWH56_022160 PF00672 HAMP domain AWH56_022160 PF02743 Cache domain AWH56_022160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_022175 PF01734 Patatin-like phospholipase AWH56_022185 PF02447 GntP family permease AWH56_022195 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AWH56_022195 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AWH56_022200 PF07729 FCD domain AWH56_022200 PF00392 Bacterial regulatory proteins, gntR family AWH56_022205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AWH56_022205 PF00326 Prolyl oligopeptidase family AWH56_022235 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AWH56_022235 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AWH56_022255 PF00107 Zinc-binding dehydrogenase AWH56_022255 PF08240 Alcohol dehydrogenase GroES-like domain AWH56_022275 PF12823 Domain of unknown function (DUF3817) AWH56_022280 PF07676 WD40-like Beta Propeller Repeat AWH56_022280 PF00326 Prolyl oligopeptidase family AWH56_022285 PF11188 Protein of unknown function (DUF2975) AWH56_022290 PF13443 Cro/C1-type HTH DNA-binding domain AWH56_022305 PF03741 Integral membrane protein TerC family AWH56_022315 PF00144 Beta-lactamase AWH56_022315 PF07930 D-aminopeptidase, domain B AWH56_022325 PF00005 ABC transporter AWH56_022325 PF13732 Domain of unknown function (DUF4162) AWH56_022460 PF10842 Protein of unknown function (DUF2642) AWH56_022470 PF13426 PAS domain AWH56_022470 PF00512 His Kinase A (phospho-acceptor) domain AWH56_022470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_022470 PF13188 PAS domain AWH56_022470 PF00989 PAS fold AWH56_022475 PF00682 HMGL-like AWH56_022475 PF07836 DmpG-like communication domain AWH56_022485 PF02660 Glycerol-3-phosphate acyltransferase AWH56_022490 PF02645 Uncharacterised protein, DegV family COG1307 AWH56_022495 PF00664 ABC transporter transmembrane region AWH56_022495 PF00005 ABC transporter AWH56_022505 PF00989 PAS fold AWH56_022505 PF00512 His Kinase A (phospho-acceptor) domain AWH56_022505 PF13188 PAS domain AWH56_022505 PF13426 PAS domain AWH56_022505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_022510 PF00512 His Kinase A (phospho-acceptor) domain AWH56_022510 PF13426 PAS domain AWH56_022510 PF13188 PAS domain AWH56_022510 PF00989 PAS fold AWH56_022510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_022520 PF00478 IMP dehydrogenase / GMP reductase domain AWH56_022530 PF00392 Bacterial regulatory proteins, gntR family AWH56_022535 PF00005 ABC transporter AWH56_022540 PF13610 DDE domain AWH56_022550 PF05675 Protein of unknown function (DUF817) AWH56_022555 PF00892 EamA-like transporter family AWH56_022560 PF13722 5TM C-terminal transporter carbon starvation CstA AWH56_022560 PF02554 Carbon starvation protein CstA AWH56_022575 PF17770 Ribonuclease J C-terminal domain AWH56_022575 PF00753 Metallo-beta-lactamase superfamily AWH56_022575 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AWH56_022585 PF01435 Peptidase family M48 AWH56_022590 PF13610 DDE domain AWH56_022595 PF01212 Beta-eliminating lyase AWH56_022600 PF00141 Peroxidase AWH56_022635 PF01636 Phosphotransferase enzyme family AWH56_022650 PF00672 HAMP domain AWH56_022650 PF02743 Cache domain AWH56_022650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AWH56_022655 PF04239 Protein of unknown function (DUF421) AWH56_022660 PF00749 tRNA synthetases class I (E and Q), catalytic domain AWH56_022660 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AWH56_022685 PF00155 Aminotransferase class I and II AWH56_022690 PF01370 NAD dependent epimerase/dehydratase family AWH56_022710 PF01979 Amidohydrolase family AWH56_022735 PF12697 Alpha/beta hydrolase family AWH56_022745 PF00155 Aminotransferase class I and II AWH56_022750 PF00795 Carbon-nitrogen hydrolase AWH56_022765 PF03193 RsgA GTPase AWH56_022775 PF13610 DDE domain AWH56_022780 PF00270 DEAD/DEAH box helicase AWH56_022780 PF03880 DbpA RNA binding domain AWH56_022780 PF00271 Helicase conserved C-terminal domain AWH56_022795 PF03006 Haemolysin-III related AWH56_022810 PF10518 TAT (twin-arginine translocation) pathway signal sequence AWH56_022810 PF00149 Calcineurin-like phosphoesterase AWH56_022840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AWH56_022855 PF13536 Putative multidrug resistance efflux transporter AWH56_022860 PF05525 Branched-chain amino acid transport protein AWH56_022865 PF00457 Glycosyl hydrolases family 11 AWH56_022865 PF03422 Carbohydrate binding module (family 6) AWH56_022865 PF01522 Polysaccharide deacetylase AWH56_022870 PF04239 Protein of unknown function (DUF421) AWH56_022885 PF01479 S4 domain AWH56_022885 PF00849 RNA pseudouridylate synthase AWH56_022890 PF01476 LysM domain AWH56_022890 PF03734 L,D-transpeptidase catalytic domain AWH56_022925 PF11954 Domain of unknown function (DUF3471) AWH56_022925 PF00144 Beta-lactamase AWH56_022935 PF08327 Activator of Hsp90 ATPase homolog 1-like protein AWH56_022940 PF04519 Polymer-forming cytoskeletal AWH56_022945 PF13171 Protein of unknown function (DUF4004) AWH56_022955 PF00324 Amino acid permease AWH56_022960 PF01810 LysE type translocator AWH56_022970 PF13031 Protein of unknown function (DUF3892) AWH56_022985 PF00583 Acetyltransferase (GNAT) family AWH56_023000 PF07883 Cupin domain AWH56_023005 PF06271 RDD family AWH56_023020 PF02586 SOS response associated peptidase (SRAP) AWH56_023035 PF05067 Manganese containing catalase AWH56_023040 PF10842 Protein of unknown function (DUF2642) AWH56_023050 PF00180 Isocitrate/isopropylmalate dehydrogenase AWH56_023050 PF18324 Hypothetical protein TT1725 AWH56_023060 PF13732 Domain of unknown function (DUF4162) AWH56_023060 PF00005 ABC transporter AWH56_023065 PF03458 UPF0126 domain AWH56_023070 PF12690 Intracellular proteinase inhibitor AWH56_023150 PF00905 Penicillin binding protein transpeptidase domain AWH56_023150 PF00912 Transglycosylase AWH56_023185 PF00440 Bacterial regulatory proteins, tetR family AWH56_023185 PF08361 MAATS-type transcriptional repressor, C-terminal region AWH56_023190 PF00269 Small, acid-soluble spore proteins, alpha/beta type AWH56_023195 PF07687 Peptidase dimerisation domain AWH56_023195 PF01546 Peptidase family M20/M25/M40 AWH56_023200 PF00892 EamA-like transporter family AWH56_023210 PF01943 Polysaccharide biosynthesis protein AWH56_023215 PF02525 Flavodoxin-like fold AWH56_023220 PF01047 MarR family AWH56_023230 PF10502 Signal peptidase, peptidase S26 AWH56_023235 PF00106 short chain dehydrogenase AWH56_023250 PF13276 HTH-like domain AWH56_023250 PF13333 Integrase core domain AWH56_023250 PF00665 Integrase core domain AWH56_023265 PF08281 Sigma-70, region 4 AWH56_023265 PF04542 Sigma-70 region 2 AWH56_023280 PF13302 Acetyltransferase (GNAT) domain AWH56_023295 PF00550 Phosphopantetheine attachment site AWH56_023295 PF08240 Alcohol dehydrogenase GroES-like domain AWH56_023295 PF14765 Polyketide synthase dehydratase AWH56_023295 PF08659 KR domain AWH56_023295 PF00698 Acyl transferase domain AWH56_023310 PF00989 PAS fold AWH56_023310 PF00512 His Kinase A (phospho-acceptor) domain AWH56_023310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_023330 PF01568 Molydopterin dinucleotide binding domain AWH56_023330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_023330 PF00384 Molybdopterin oxidoreductase AWH56_023335 PF00892 EamA-like transporter family AWH56_023340 PF01063 Amino-transferase class IV AWH56_023345 PF03372 Endonuclease/Exonuclease/phosphatase family AWH56_023350 PF08810 Kinase associated protein B AWH56_023360 PF01761 3-dehydroquinate synthase AWH56_023375 PF00144 Beta-lactamase AWH56_023380 PF00248 Aldo/keto reductase family AWH56_023400 PF01593 Flavin containing amine oxidoreductase AWH56_023405 PF01593 Flavin containing amine oxidoreductase AWH56_023415 PF09962 Uncharacterized conserved protein (DUF2196) AWH56_023420 PF13610 DDE domain AWH56_023425 PF02602 Uroporphyrinogen-III synthase HemD AWH56_023435 PF01979 Amidohydrolase family AWH56_023440 PF00158 Sigma-54 interaction domain AWH56_023440 PF13426 PAS domain AWH56_023440 PF02954 Bacterial regulatory protein, Fis family AWH56_023445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_023445 PF00005 ABC transporter AWH56_023450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AWH56_023450 PF00005 ABC transporter AWH56_023455 PF12911 N-terminal TM domain of oligopeptide transport permease C AWH56_023455 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_023460 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_023485 PF08240 Alcohol dehydrogenase GroES-like domain AWH56_023485 PF13823 Alcohol dehydrogenase GroES-associated AWH56_023485 PF00107 Zinc-binding dehydrogenase AWH56_023490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AWH56_023490 PF02770 Acyl-CoA dehydrogenase, middle domain AWH56_023490 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AWH56_023495 PF13419 Haloacid dehalogenase-like hydrolase AWH56_023500 PF01965 DJ-1/PfpI family AWH56_023505 PF09529 Integral membrane protein (intg_mem_TP0381) AWH56_023510 PF13411 MerR HTH family regulatory protein AWH56_023515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AWH56_023515 PF00929 Exonuclease AWH56_023515 PF07733 Bacterial DNA polymerase III alpha NTPase domain AWH56_023515 PF14579 Helix-hairpin-helix motif AWH56_023515 PF02811 PHP domain AWH56_023525 PF00909 Ammonium Transporter Family AWH56_023530 PF01471 Putative peptidoglycan binding domain AWH56_023530 PF07486 Cell Wall Hydrolase AWH56_023545 PF02559 CarD-like/TRCF domain AWH56_023550 PF03466 LysR substrate binding domain AWH56_023550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AWH56_023555 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AWH56_023555 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AWH56_023560 PF00188 Cysteine-rich secretory protein family AWH56_023570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AWH56_023570 PF14824 Sirohaem biosynthesis protein central AWH56_023570 PF10414 Sirohaem synthase dimerisation region AWH56_023580 PF03576 Peptidase family S58 AWH56_023585 PF13673 Acetyltransferase (GNAT) domain AWH56_023590 PF00664 ABC transporter transmembrane region AWH56_023590 PF00005 ABC transporter AWH56_023595 PF00664 ABC transporter transmembrane region AWH56_023595 PF00005 ABC transporter AWH56_023620 PF00072 Response regulator receiver domain AWH56_023625 PF02913 FAD linked oxidases, C-terminal domain AWH56_023625 PF01565 FAD binding domain AWH56_023630 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AWH56_023630 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AWH56_023630 PF06827 Zinc finger found in FPG and IleRS AWH56_023635 PF01261 Xylose isomerase-like TIM barrel AWH56_023650 PF01790 Prolipoprotein diacylglyceryl transferase AWH56_023655 PF03960 ArsC family AWH56_023660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_023660 PF00672 HAMP domain AWH56_023660 PF00512 His Kinase A (phospho-acceptor) domain AWH56_023665 PF00486 Transcriptional regulatory protein, C terminal AWH56_023665 PF00072 Response regulator receiver domain AWH56_023670 PF00873 AcrB/AcrD/AcrF family AWH56_023675 PF09335 SNARE associated Golgi protein AWH56_023690 PF13419 Haloacid dehalogenase-like hydrolase AWH56_023710 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_023710 PF13291 ACT domain AWH56_023735 PF12146 Serine aminopeptidase, S33 AWH56_023740 PF03466 LysR substrate binding domain AWH56_023740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AWH56_023745 PF07690 Major Facilitator Superfamily AWH56_023750 PF04073 Aminoacyl-tRNA editing domain AWH56_023755 PF01966 HD domain AWH56_023765 PF02649 Type I GTP cyclohydrolase folE2 AWH56_023770 PF03060 Nitronate monooxygenase AWH56_023785 PF01367 5'-3' exonuclease, C-terminal SAM fold AWH56_023785 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AWH56_023790 PF07690 Major Facilitator Superfamily AWH56_023810 PF05167 Uncharacterised ACR (DUF711) AWH56_023840 PF00990 Diguanylate cyclase, GGDEF domain AWH56_023850 PF13610 DDE domain AWH56_023865 PF01751 Toprim domain AWH56_023865 PF01131 DNA topoisomerase AWH56_023880 PF03176 MMPL family AWH56_023890 PF00892 EamA-like transporter family AWH56_023895 PF10720 Protein of unknown function (DUF2515) AWH56_023900 PF03807 NADP oxidoreductase coenzyme F420-dependent AWH56_023900 PF14748 Pyrroline-5-carboxylate reductase dimerisation AWH56_023915 PF12848 ABC transporter AWH56_023915 PF00005 ABC transporter AWH56_023920 PF00005 ABC transporter AWH56_023920 PF12848 ABC transporter AWH56_023940 PF17820 PDZ domain AWH56_023940 PF13180 PDZ domain AWH56_023945 PF07552 Spore Coat Protein X and V domain AWH56_023955 PF12392 Collagenase AWH56_023955 PF01136 Peptidase family U32 AWH56_023965 PF01361 Tautomerase enzyme AWH56_023970 PF06779 Uncharacterised MFS-type transporter YbfB AWH56_023980 PF13460 NAD(P)H-binding AWH56_023990 PF17785 PUA-like domain AWH56_023990 PF10672 S-adenosylmethionine-dependent methyltransferase AWH56_024000 PF02535 ZIP Zinc transporter AWH56_024005 PF10057 Uncharacterized conserved protein (DUF2294) AWH56_024015 PF05067 Manganese containing catalase AWH56_024020 PF12652 CotJB protein AWH56_024030 PF01903 CbiX AWH56_024035 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AWH56_024045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AWH56_024045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AWH56_024050 PF00155 Aminotransferase class I and II AWH56_024055 PF03851 UV-endonuclease UvdE AWH56_024060 PF01554 MatE AWH56_024065 PF07859 alpha/beta hydrolase fold AWH56_024070 PF02073 Thermophilic metalloprotease (M29) AWH56_024075 PF13217 Protein of unknown function (DUF4025) AWH56_024090 PF02585 GlcNAc-PI de-N-acetylase AWH56_024095 PF08830 Protein of unknown function (DUF1806) AWH56_024100 PF13302 Acetyltransferase (GNAT) domain AWH56_024110 PF03746 LamB/YcsF family AWH56_024115 PF02626 Carboxyltransferase domain, subdomain A and B AWH56_024120 PF02682 Carboxyltransferase domain, subdomain C and D AWH56_024125 PF01641 SelR domain AWH56_024130 PF01625 Peptide methionine sulfoxide reductase AWH56_024135 PF13476 AAA domain AWH56_024140 PF00149 Calcineurin-like phosphoesterase AWH56_024140 PF12320 Type 5 capsule protein repressor C-terminal domain AWH56_024170 PF10415 Fumarase C C-terminus AWH56_024170 PF00206 Lyase AWH56_024180 PF01522 Polysaccharide deacetylase AWH56_024180 PF00457 Glycosyl hydrolases family 11 AWH56_024180 PF03422 Carbohydrate binding module (family 6) AWH56_024190 PF03633 Glycosyl hydrolase family 65, C-terminal domain AWH56_024190 PF03632 Glycosyl hydrolase family 65 central catalytic domain AWH56_024190 PF03636 Glycosyl hydrolase family 65, N-terminal domain AWH56_024195 PF13419 Haloacid dehalogenase-like hydrolase AWH56_024220 PF00082 Subtilase family AWH56_024225 PF10531 SLBB domain AWH56_024230 PF00391 PEP-utilising enzyme, mobile domain AWH56_024230 PF02896 PEP-utilising enzyme, TIM barrel domain AWH56_024230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AWH56_024240 PF07690 Major Facilitator Superfamily AWH56_024250 PF00326 Prolyl oligopeptidase family AWH56_024270 PF00384 Molybdopterin oxidoreductase AWH56_024270 PF01568 Molydopterin dinucleotide binding domain AWH56_024270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_024270 PF12838 4Fe-4S dicluster domain AWH56_024270 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AWH56_024275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_024275 PF00384 Molybdopterin oxidoreductase AWH56_024275 PF01568 Molydopterin dinucleotide binding domain AWH56_024280 PF07690 Major Facilitator Superfamily AWH56_024290 PF00269 Small, acid-soluble spore proteins, alpha/beta type AWH56_024305 PF02645 Uncharacterised protein, DegV family COG1307 AWH56_024315 PF01712 Deoxynucleoside kinase AWH56_024320 PF01712 Deoxynucleoside kinase AWH56_024325 PF00270 DEAD/DEAH box helicase AWH56_024325 PF00271 Helicase conserved C-terminal domain AWH56_024325 PF00570 HRDC domain AWH56_024325 PF09382 RQC domain AWH56_024325 PF16124 RecQ zinc-binding AWH56_024350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_024350 PF00384 Molybdopterin oxidoreductase AWH56_024350 PF01568 Molydopterin dinucleotide binding domain AWH56_024370 PF01568 Molydopterin dinucleotide binding domain AWH56_024370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AWH56_024370 PF00384 Molybdopterin oxidoreductase AWH56_024375 PF12801 4Fe-4S binding domain AWH56_024375 PF00037 4Fe-4S binding domain AWH56_024380 PF12800 4Fe-4S binding domain AWH56_024380 PF12838 4Fe-4S dicluster domain AWH56_024390 PF00586 AIR synthase related protein, N-terminal domain AWH56_024390 PF02769 AIR synthase related protein, C-terminal domain AWH56_024395 PF01924 Hydrogenase formation hypA family AWH56_024400 PF01455 HupF/HypC family AWH56_024405 PF17788 HypF Kae1-like domain AWH56_024405 PF07503 HypF finger AWH56_024405 PF01300 Telomere recombination AWH56_024405 PF00708 Acylphosphatase AWH56_024410 PF02492 CobW/HypB/UreG, nucleotide-binding domain AWH56_024415 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AWH56_024430 PF00374 Nickel-dependent hydrogenase AWH56_024435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AWH56_024435 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AWH56_024440 PF00902 Sec-independent protein translocase protein (TatC) AWH56_024445 PF02416 mttA/Hcf106 family AWH56_024455 PF00781 Diacylglycerol kinase catalytic domain AWH56_024465 PF02595 Glycerate kinase family AWH56_024475 PF01699 Sodium/calcium exchanger protein AWH56_024495 PF00183 Hsp90 protein AWH56_024505 PF00106 short chain dehydrogenase AWH56_024520 PF04454 Encapsulating protein for peroxidase AWH56_024545 PF01297 Zinc-uptake complex component A periplasmic AWH56_024550 PF02086 D12 class N6 adenine-specific DNA methyltransferase AWH56_024555 PF00753 Metallo-beta-lactamase superfamily AWH56_024555 PF00258 Flavodoxin AWH56_024560 PF00625 Guanylate kinase AWH56_024585 PF03703 Bacterial PH domain AWH56_024590 PF03703 Bacterial PH domain AWH56_024600 PF02080 TrkA-C domain AWH56_024600 PF03600 Citrate transporter AWH56_024605 PF00266 Aminotransferase class-V AWH56_024610 PF00857 Isochorismatase family AWH56_024620 PF00753 Metallo-beta-lactamase superfamily AWH56_024620 PF12706 Beta-lactamase superfamily domain AWH56_024630 PF00210 Ferritin-like domain AWH56_024635 PF00581 Rhodanese-like domain AWH56_024640 PF13411 MerR HTH family regulatory protein AWH56_024645 PF10720 Protein of unknown function (DUF2515) AWH56_024650 PF03838 Recombination protein U AWH56_024655 PF00905 Penicillin binding protein transpeptidase domain AWH56_024655 PF00912 Transglycosylase AWH56_024665 PF10576 Iron-sulfur binding domain of endonuclease III AWH56_024665 PF00730 HhH-GPD superfamily base excision DNA repair protein AWH56_024665 PF00633 Helix-hairpin-helix motif AWH56_024670 PF07261 Replication initiation and membrane attachment AWH56_024675 PF01336 OB-fold nucleic acid binding domain AWH56_024675 PF00152 tRNA synthetases class II (D, K and N) AWH56_024680 PF00155 Aminotransferase class I and II AWH56_024695 PF01979 Amidohydrolase family AWH56_024705 PF04851 Type III restriction enzyme, res subunit AWH56_024705 PF13307 Helicase C-terminal domain AWH56_024705 PF00929 Exonuclease AWH56_024715 PF02261 Aspartate decarboxylase AWH56_024720 PF02569 Pantoate-beta-alanine ligase AWH56_024725 PF02548 Ketopantoate hydroxymethyltransferase AWH56_024730 PF08279 HTH domain AWH56_024730 PF02237 Biotin protein ligase C terminal domain AWH56_024730 PF03099 Biotin/lipoate A/B protein ligase family AWH56_024735 PF01743 Poly A polymerase head domain AWH56_024735 PF13735 tRNA nucleotidyltransferase domain 2 putative AWH56_024735 PF12627 Probable RNA and SrmB- binding site of polymerase A AWH56_024740 PF00534 Glycosyl transferases group 1 AWH56_024740 PF13439 Glycosyltransferase Family 4 AWH56_024745 PF02585 GlcNAc-PI de-N-acetylase AWH56_024750 PF02142 MGS-like domain AWH56_024755 PF05173 Dihydrodipicolinate reductase, C-terminus AWH56_024755 PF01113 Dihydrodipicolinate reductase, N-terminus AWH56_024760 PF03819 MazG nucleotide pyrophosphohydrolase domain AWH56_024765 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AWH56_024765 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AWH56_024770 PF04298 Putative neutral zinc metallopeptidase AWH56_024775 PF09577 Sporulation protein YpjB (SpoYpjB) AWH56_024780 PF07187 Protein of unknown function (DUF1405) AWH56_024785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AWH56_024785 PF00032 Cytochrome b(C-terminal)/b6/petD AWH56_024790 PF00033 Cytochrome b/b6/petB AWH56_024795 PF00355 Rieske [2Fe-2S] domain AWH56_024800 PF10673 Protein of unknown function (DUF2487) AWH56_024805 PF08858 IDEAL domain AWH56_024805 PF08864 UPF0302 domain AWH56_024825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AWH56_024830 PF01842 ACT domain AWH56_024830 PF02153 Prephenate dehydrogenase AWH56_024835 PF00155 Aminotransferase class I and II AWH56_024840 PF00290 Tryptophan synthase alpha chain AWH56_024845 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_024850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AWH56_024855 PF00218 Indole-3-glycerol phosphate synthase AWH56_024860 PF02885 Glycosyl transferase family, helical bundle domain AWH56_024860 PF00591 Glycosyl transferase family, a/b domain AWH56_024865 PF00425 chorismate binding enzyme AWH56_024865 PF04715 Anthranilate synthase component I, N terminal region AWH56_024870 PF07736 Chorismate mutase type I AWH56_024875 PF01761 3-dehydroquinate synthase AWH56_024880 PF01264 Chorismate synthase AWH56_024885 PF03705 CheR methyltransferase, all-alpha domain AWH56_024885 PF01739 CheR methyltransferase, SAM binding domain AWH56_024890 PF00334 Nucleoside diphosphate kinase AWH56_024895 PF00348 Polyprenyl synthetase AWH56_024900 PF02621 Menaquinone biosynthesis AWH56_024905 PF02441 Flavoprotein AWH56_024910 PF01040 UbiA prenyltransferase family AWH56_024915 PF01209 ubiE/COQ5 methyltransferase family AWH56_024920 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 AWH56_024925 PF02081 Tryptophan RNA-binding attenuator protein AWH56_024930 PF01227 GTP cyclohydrolase I AWH56_024935 PF00216 Bacterial DNA-binding protein AWH56_024940 PF09547 Stage IV sporulation protein A (spore_IV_A) AWH56_024960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AWH56_024960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AWH56_024965 PF02660 Glycerol-3-phosphate acyltransferase AWH56_024970 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AWH56_024970 PF01926 50S ribosome-binding GTPase AWH56_024980 PF14140 YpzI-like protein AWH56_024985 PF01070 FMN-dependent dehydrogenase AWH56_024990 PF00575 S1 RNA binding domain AWH56_024995 PF01553 Acyltransferase AWH56_025000 PF02224 Cytidylate kinase AWH56_025015 PF14620 YpeB sporulation AWH56_025020 PF01471 Putative peptidoglycan binding domain AWH56_025020 PF07486 Cell Wall Hydrolase AWH56_025025 PF02574 Homocysteine S-methyltransferase AWH56_025025 PF02310 B12 binding domain AWH56_025025 PF00809 Pterin binding enzyme AWH56_025025 PF02607 B12 binding domain AWH56_025025 PF02965 Vitamin B12 dependent methionine synthase, activation domain AWH56_025030 PF02219 Methylenetetrahydrofolate reductase AWH56_025030 PF02574 Homocysteine S-methyltransferase AWH56_025035 PF01053 Cys/Met metabolism PLP-dependent enzyme AWH56_025040 PF01053 Cys/Met metabolism PLP-dependent enzyme AWH56_025055 PF13367 PrsW family intramembrane metalloprotease AWH56_025060 PF17763 Glutaminase/Asparaginase C-terminal domain AWH56_025060 PF00710 Asparaginase, N-terminal AWH56_025065 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AWH56_025065 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AWH56_025070 PF01820 D-ala D-ala ligase N-terminus AWH56_025070 PF07478 D-ala D-ala ligase C-terminus AWH56_025075 PF05389 Negative regulator of genetic competence (MecA) AWH56_025080 PF13411 MerR HTH family regulatory protein AWH56_025085 PF00149 Calcineurin-like phosphoesterase AWH56_025100 PF01268 Formate--tetrahydrofolate ligase AWH56_025145 PF02517 CPBP intramembrane metalloprotease AWH56_025150 PF00270 DEAD/DEAH box helicase AWH56_025150 PF00271 Helicase conserved C-terminal domain AWH56_025155 PF14493 Helix-turn-helix domain AWH56_025165 PF13545 Crp-like helix-turn-helix domain AWH56_025165 PF00027 Cyclic nucleotide-binding domain AWH56_025170 PF07729 FCD domain AWH56_025170 PF00392 Bacterial regulatory proteins, gntR family AWH56_025175 PF00246 Zinc carboxypeptidase AWH56_025175 PF01476 LysM domain AWH56_025180 PF02811 PHP domain AWH56_025190 PF01551 Peptidase family M23 AWH56_025195 PF04294 VanW like protein AWH56_025200 PF01923 Cobalamin adenosyltransferase AWH56_025210 PF00300 Histidine phosphatase superfamily (branch 1) AWH56_025215 PF02654 Cobalamin-5-phosphate synthase AWH56_025220 PF07685 CobB/CobQ-like glutamine amidotransferase domain AWH56_025230 PF00155 Aminotransferase class I and II AWH56_025235 PF03186 CobD/Cbib protein AWH56_025240 PF00005 ABC transporter AWH56_025245 PF01032 FecCD transport family AWH56_025250 PF01497 Periplasmic binding protein AWH56_025255 PF00994 Probable molybdopterin binding domain AWH56_025260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_025260 PF18698 Histidine kinase sensor domain AWH56_025260 PF00672 HAMP domain AWH56_025260 PF00989 PAS fold AWH56_025260 PF00512 His Kinase A (phospho-acceptor) domain AWH56_025265 PF00072 Response regulator receiver domain AWH56_025265 PF00486 Transcriptional regulatory protein, C terminal AWH56_025270 PF01578 Cytochrome C assembly protein AWH56_025275 PF05140 ResB-like family AWH56_025280 PF00578 AhpC/TSA family AWH56_025285 PF00849 RNA pseudouridylate synthase AWH56_025285 PF01479 S4 domain AWH56_025290 PF07670 Nucleoside recognition AWH56_025295 PF07670 Nucleoside recognition AWH56_025300 PF00768 D-alanyl-D-alanine carboxypeptidase AWH56_025300 PF07943 Penicillin-binding protein 5, C-terminal domain AWH56_025305 PF04239 Protein of unknown function (DUF421) AWH56_025315 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AWH56_025320 PF07451 Stage V sporulation protein AD (SpoVAD) AWH56_025325 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AWH56_025350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AWH56_025350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AWH56_025360 PF13047 Protein of unknown function (DUF3907) AWH56_025365 PF04079 Segregation and condensation complex subunit ScpB AWH56_025370 PF02616 Segregation and condensation protein ScpA AWH56_025375 PF03745 Domain of unknown function (DUF309) AWH56_025380 PF00885 6,7-dimethyl-8-ribityllumazine synthase AWH56_025385 PF00925 GTP cyclohydrolase II AWH56_025385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AWH56_025390 PF00677 Lumazine binding domain AWH56_025395 PF01872 RibD C-terminal domain AWH56_025395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AWH56_025400 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AWH56_025405 PF01476 LysM domain AWH56_025405 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AWH56_025410 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AWH56_025410 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AWH56_025415 PF03323 Bacillus/Clostridium GerA spore germination protein AWH56_025420 PF14097 Stage V sporulation protein AE1 AWH56_025425 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AWH56_025430 PF07451 Stage V sporulation protein AD (SpoVAD) AWH56_025435 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AWH56_025440 PF13782 Stage V sporulation protein AB AWH56_025445 PF12164 Stage V sporulation protein AA AWH56_025450 PF04545 Sigma-70, region 4 AWH56_025450 PF04539 Sigma-70 region 3 AWH56_025450 PF04542 Sigma-70 region 2 AWH56_025455 PF13581 Histidine kinase-like ATPase domain AWH56_025460 PF01740 STAS domain AWH56_025465 PF00768 D-alanyl-D-alanine carboxypeptidase AWH56_025465 PF07943 Penicillin-binding protein 5, C-terminal domain AWH56_025470 PF02885 Glycosyl transferase family, helical bundle domain AWH56_025470 PF00591 Glycosyl transferase family, a/b domain AWH56_025470 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AWH56_025475 PF01048 Phosphorylase superfamily AWH56_025480 PF01048 Phosphorylase superfamily AWH56_025485 PF01676 Metalloenzyme superfamily AWH56_025495 PF02899 Phage integrase, N-terminal SAM-like domain AWH56_025495 PF00589 Phage integrase family AWH56_025505 PF01475 Ferric uptake regulator family AWH56_025510 PF01944 Stage II sporulation protein M AWH56_025520 PF00293 NUDIX domain AWH56_025535 PF00248 Aldo/keto reductase family AWH56_025540 PF00578 AhpC/TSA family AWH56_025545 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AWH56_025550 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AWH56_025555 PF02673 Bacitracin resistance protein BacA AWH56_025560 PF02492 CobW/HypB/UreG, nucleotide-binding domain AWH56_025560 PF07683 Cobalamin synthesis protein cobW C-terminal domain AWH56_025565 PF03773 Predicted permease AWH56_025570 PF09323 Domain of unknown function (DUF1980) AWH56_025575 PF00291 Pyridoxal-phosphate dependent enzyme AWH56_025580 PF08502 LeuA allosteric (dimerisation) domain AWH56_025580 PF00682 HMGL-like AWH56_025585 PF00156 Phosphoribosyl transferase domain AWH56_025605 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AWH56_025605 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AWH56_025610 PF00899 ThiF family AWH56_025615 PF08241 Methyltransferase domain AWH56_025625 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AWH56_025645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AWH56_025680 PF02833 DHHA2 domain AWH56_025680 PF01368 DHH family AWH56_025685 PF00860 Permease family AWH56_025695 PF02954 Bacterial regulatory protein, Fis family AWH56_025695 PF00158 Sigma-54 interaction domain AWH56_025695 PF13426 PAS domain AWH56_025705 PF07155 ECF-type riboflavin transporter, S component AWH56_025710 PF00733 Asparagine synthase AWH56_025710 PF13537 Glutamine amidotransferase domain AWH56_025715 PF08141 Small acid-soluble spore protein H family AWH56_025720 PF01451 Low molecular weight phosphotyrosine protein phosphatase AWH56_025730 PF08863 YolD-like protein AWH56_025735 PF11798 IMS family HHH motif AWH56_025735 PF00817 impB/mucB/samB family AWH56_025735 PF11799 impB/mucB/samB family C-terminal domain AWH56_025745 PF00106 short chain dehydrogenase AWH56_025750 PF01472 PUA domain AWH56_025750 PF00696 Amino acid kinase family AWH56_025755 PF00171 Aldehyde dehydrogenase family AWH56_025760 PF14748 Pyrroline-5-carboxylate reductase dimerisation AWH56_025760 PF03807 NADP oxidoreductase coenzyme F420-dependent AWH56_025770 PF13840 ACT domain AWH56_025770 PF00696 Amino acid kinase family AWH56_025775 PF13411 MerR HTH family regulatory protein AWH56_025780 PF04748 Divergent polysaccharide deacetylase AWH56_025800 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AWH56_025815 PF03885 Protein of unknown function (DUF327) AWH56_025835 PF01312 FlhB HrpN YscU SpaS Family AWH56_025845 PF00817 impB/mucB/samB family AWH56_025845 PF11799 impB/mucB/samB family C-terminal domain AWH56_025845 PF11798 IMS family HHH motif AWH56_025860 PF07687 Peptidase dimerisation domain AWH56_025860 PF01546 Peptidase family M20/M25/M40 AWH56_025875 PF03734 L,D-transpeptidase catalytic domain AWH56_025880 PF11728 Putative aromatic acid exporter C-terminal domain AWH56_025880 PF06081 Aromatic acid exporter family member 1 AWH56_025885 PF00005 ABC transporter AWH56_025890 PF00528 Binding-protein-dependent transport system inner membrane component AWH56_025895 PF00497 Bacterial extracellular solute-binding proteins, family 3 AWH56_025910 PF03480 Bacterial extracellular solute-binding protein, family 7 AWH56_025915 PF00072 Response regulator receiver domain AWH56_025920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AWH56_025920 PF00989 PAS fold AWH56_025920 PF17203 Single cache domain 3 AWH56_025920 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AWH56_025935 PF06491 Disulphide isomerase AWH56_025940 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AWH56_025940 PF01297 Zinc-uptake complex component A periplasmic AWH56_025945 PF01695 IstB-like ATP binding protein AWH56_025950 PF00665 Integrase core domain AWH56_025960 PF00364 Biotin-requiring enzyme AWH56_025960 PF02817 e3 binding domain AWH56_025960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AWH56_025965 PF02779 Transketolase, pyrimidine binding domain AWH56_025965 PF02780 Transketolase, C-terminal domain AWH56_025970 PF00676 Dehydrogenase E1 component AWH56_025975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AWH56_025975 PF07992 Pyridine nucleotide-disulphide oxidoreductase AWH56_025980 PF00871 Acetokinase family AWH56_025985 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AWH56_025985 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AWH56_025990 PF01515 Phosphate acetyl/butaryl transferase AWH56_025995 PF00989 PAS fold AWH56_025995 PF00158 Sigma-54 interaction domain AWH56_025995 PF02954 Bacterial regulatory protein, Fis family AWH56_026010 PF00535 Glycosyl transferase family 2 AWH56_026025 PF04055 Radical SAM superfamily AWH56_026030 PF01228 Glycine radical AWH56_026030 PF02901 Pyruvate formate lyase-like AWH56_026035 PF00072 Response regulator receiver domain AWH56_026035 PF08769 Sporulation initiation factor Spo0A C terminal AWH56_026040 PF05580 SpoIVB peptidase S55 AWH56_026040 PF17820 PDZ domain AWH56_026045 PF02463 RecF/RecN/SMC N terminal domain AWH56_026050 PF02863 Arginine repressor, C-terminal domain AWH56_026050 PF01316 Arginine repressor, DNA binding domain AWH56_026055 PF01479 S4 domain AWH56_026055 PF01728 FtsJ-like methyltransferase AWH56_026060 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AWH56_026060 PF02780 Transketolase, C-terminal domain AWH56_026060 PF02779 Transketolase, pyrimidine binding domain AWH56_026070 PF00348 Polyprenyl synthetase AWH56_026080 PF02601 Exonuclease VII, large subunit AWH56_026080 PF13742 OB-fold nucleic acid binding domain AWH56_026085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AWH56_026085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AWH56_026090 PF01029 NusB family AWH56_026095 PF03780 Asp23 family, cell envelope-related function AWH56_026100 PF00289 Biotin carboxylase, N-terminal domain AWH56_026100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AWH56_026100 PF02785 Biotin carboxylase C-terminal domain AWH56_026105 PF00364 Biotin-requiring enzyme AWH56_026115 PF12685 SpoIIIAH-like protein AWH56_026125 PF09581 Stage III sporulation protein AF (Spore_III_AF) AWH56_026130 PF09546 Stage III sporulation protein AE (spore_III_AE) AWH56_026135 PF06686 Stage III sporulation protein AC/AD protein family AWH56_026140 PF06686 Stage III sporulation protein AC/AD protein family AWH56_026145 PF09548 Stage III sporulation protein AB (spore_III_AB) AWH56_026155 PF10942 Protein of unknown function (DUF2619) AWH56_026165 PF09285 Elongation factor P, C-terminal AWH56_026165 PF08207 Elongation factor P (EF-P) KOW-like domain AWH56_026165 PF01132 Elongation factor P (EF-P) OB domain AWH56_026170 PF01321 Creatinase/Prolidase N-terminal domain AWH56_026170 PF00557 Metallopeptidase family M24 AWH56_026175 PF01220 Dehydroquinase class II AWH56_026180 PF11085 Conserved membrane protein YqhR AWH56_026190 PF02742 Iron dependent repressor, metal binding and dimerisation domain AWH56_026190 PF01325 Iron dependent repressor, N-terminal DNA binding domain AWH56_026200 PF03477 ATP cone domain AWH56_026200 PF02867 Ribonucleotide reductase, barrel domain AWH56_026200 PF00317 Ribonucleotide reductase, all-alpha domain AWH56_026205 PF01063 Amino-transferase class IV AWH56_026210 PF03099 Biotin/lipoate A/B protein ligase family AWH56_026215 PF00581 Rhodanese-like domain AWH56_026220 PF02347 Glycine cleavage system P-protein AWH56_026225 PF02347 Glycine cleavage system P-protein AWH56_026230 PF01571 Aminomethyltransferase folate-binding domain AWH56_026230 PF08669 Glycine cleavage T-protein C-terminal barrel domain AWH56_026235 PF00176 SNF2 family N-terminal domain AWH56_026235 PF00271 Helicase conserved C-terminal domain AWH56_026240 PF11079 Bacterial protein YqhG of unknown function AWH56_026250 PF14038 YqzE-like protein AWH56_026255 PF01202 Shikimate kinase AWH56_026280 PF07963 Prokaryotic N-terminal methylation motif AWH56_026290 PF00563 EAL domain AWH56_026290 PF03707 Bacterial signalling protein N terminal repeat AWH56_026290 PF00990 Diguanylate cyclase, GGDEF domain AWH56_026300 PF00482 Type II secretion system (T2SS), protein F AWH56_026305 PF00437 Type II/IV secretion system protein AWH56_026320 PF11117 Protein of unknown function (DUF2626) AWH56_026335 PF00753 Metallo-beta-lactamase superfamily AWH56_026350 PF01910 Thiamine-binding protein AWH56_026360 PF08543 Phosphomethylpyrimidine kinase AWH56_026370 PF02581 Thiamine monophosphate synthase