Apre_0001 PF00308 Bacterial dnaA protein Apre_0001 PF08299 Bacterial dnaA protein helix-turn-helix Apre_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain Apre_0002 PF02767 DNA polymerase III beta subunit, central domain Apre_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain Apre_0003 PF13275 S4 domain Apre_0004 PF13175 AAA ATPase domain Apre_0005 PF00204 DNA gyrase B Apre_0005 PF00986 DNA gyrase B subunit, carboxyl terminus Apre_0005 PF01751 Toprim domain Apre_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A Apre_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller Apre_0007 PF01740 STAS domain Apre_0009 PF04539 Sigma-70 region 3 Apre_0009 PF04542 Sigma-70 region 2 Apre_0009 PF04545 Sigma-70, region 4 Apre_0010 PF04282 Apre_0010 Apre_0010 PF08984 Domain of unknown function (DUF1858) Apre_0010 PF13596 PAS domain Apre_0011 PF07883 Cupin domain Apre_0013 PF05382 Apre_0013 Apre_0014 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Apre_0015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Apre_0016 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0017 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0017 PF12911 Apre_0017 Apre_0017 PF13540 Regulator of chromosome condensation (RCC1) repeat Apre_0018 PF00005 ABC transporter Apre_0018 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Apre_0019 PF00005 ABC transporter Apre_0019 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Apre_0021 PF01380 SIS domain Apre_0021 PF13522 Glutamine amidotransferase domain Apre_0024 PF06803 Apre_0024 Apre_0027 PF12833 Helix-turn-helix domain Apre_0028 PF01235 Apre_0028 Apre_0029 PF00696 Amino acid kinase family Apre_0030 PF00004 ATPase family associated with various cellular activities (AAA) Apre_0030 PF02861 Clp amino terminal domain Apre_0030 PF07724 AAA domain (Cdc48 subfamily) Apre_0030 PF10431 C-terminal, D2-small domain, of ClpB protein Apre_0031 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Apre_0031 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Apre_0032 PF14020 Apre_0032 Apre_0033 PF07371 Apre_0033 Apre_0034 PF00122 E1-E2 ATPase Apre_0034 PF00702 haloacid dehalogenase-like hydrolase Apre_0035 PF00455 Apre_0035 Apre_0035 PF08220 DeoR-like helix-turn-helix domain Apre_0036 PF01791 DeoC/LacD family aldolase Apre_0037 PF01676 Metalloenzyme superfamily Apre_0038 PF01773 Na+ dependent nucleoside transporter N-terminus Apre_0038 PF07662 Na+ dependent nucleoside transporter C-terminus Apre_0039 PF00591 Glycosyl transferase family, a/b domain Apre_0039 PF02885 Glycosyl transferase family, helical bundle domain Apre_0039 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Apre_0040 PF01548 Apre_0040 Apre_0040 PF02371 Apre_0040 Apre_0041 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Apre_0041 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Apre_0042 PF04392 ABC transporter substrate binding protein Apre_0043 PF02653 Apre_0043 Apre_0044 PF00005 ABC transporter Apre_0045 PF01022 Bacterial regulatory protein, arsR family Apre_0046 PF05977 Transmembrane secretion effector Apre_0047 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_0047 PF13192 Thioredoxin domain Apre_0048 PF00578 AhpC/TSA family Apre_0049 PF01680 SOR/SNZ family Apre_0050 PF00892 EamA-like transporter family Apre_0051 PF13343 Bacterial extracellular solute-binding protein Apre_0052 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0053 PF00005 ABC transporter Apre_0054 PF00534 Glycosyl transferases group 1 Apre_0054 PF13439 Glycosyltransferase Family 4 Apre_0055 PF02595 Glycerate kinase family Apre_0056 PF01694 Rhomboid family Apre_0058 PF01432 Peptidase family M3 Apre_0058 PF08439 Oligopeptidase F Apre_0059 PF00069 Protein kinase domain Apre_0059 PF03109 Apre_0059 Apre_0060 PF03009 Glycerophosphoryl diester phosphodiesterase family Apre_0061 PF13416 Bacterial extracellular solute-binding protein Apre_0062 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0063 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0064 PF00005 ABC transporter Apre_0065 PF01814 Hemerythrin HHE cation binding domain Apre_0066 PF04055 Radical SAM superfamily Apre_0069 PF02502 Ribose/Galactose Isomerase Apre_0070 PF02502 Ribose/Galactose Isomerase Apre_0071 PF13347 MFS/sugar transport protein Apre_0072 PF02065 Melibiase Apre_0072 PF16874 Apre_0072 Apre_0072 PF16875 Apre_0072 Apre_0073 PF00455 Apre_0073 Apre_0073 PF08220 DeoR-like helix-turn-helix domain Apre_0075 PF01380 SIS domain Apre_0076 PF00392 Bacterial regulatory proteins, gntR family Apre_0076 PF07702 UTRA domain Apre_0077 PF01979 Amidohydrolase family Apre_0078 PF00294 pfkB family carbohydrate kinase Apre_0079 PF01791 DeoC/LacD family aldolase Apre_0081 PF00301 Rubredoxin Apre_0081 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Apre_0081 PF00766 Electron transfer flavoprotein FAD-binding domain Apre_0081 PF02770 Acyl-CoA dehydrogenase, middle domain Apre_0081 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Apre_0082 PF00753 Metallo-beta-lactamase superfamily Apre_0082 PF12724 Flavodoxin domain Apre_0083 PF00367 phosphotransferase system, EIIB Apre_0083 PF02378 Phosphotransferase system, EIIC Apre_0084 PF03413 Peptidase propeptide and YPEB domain Apre_0086 PF00072 Response regulator receiver domain Apre_0086 PF00486 Transcriptional regulatory protein, C terminal Apre_0087 PF00512 His Kinase A (phospho-acceptor) domain Apre_0087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0089 PF00037 4Fe-4S binding domain Apre_0089 PF12801 Apre_0089 Apre_0090 PF08534 Redoxin Apre_0091 PF13529 Peptidase_C39 like family Apre_0092 PF00206 Lyase Apre_0092 PF10415 Fumarase C C-terminus Apre_0093 PF00206 Lyase Apre_0093 PF10415 Fumarase C C-terminus Apre_0094 PF12710 haloacid dehalogenase-like hydrolase Apre_0095 PF01575 MaoC like domain Apre_0096 PF00375 Sodium:dicarboxylate symporter family Apre_0097 PF03315 Serine dehydratase beta chain Apre_0098 PF03313 Apre_0098 Apre_0099 PF01235 Apre_0099 Apre_0100 PF01554 MatE Apre_0101 PF13419 Haloacid dehalogenase-like hydrolase Apre_0103 PF02417 Apre_0103 Apre_0104 PF02417 Apre_0104 Apre_0105 PF02558 Ketopantoate reductase PanE/ApbA Apre_0105 PF08546 Ketopantoate reductase PanE/ApbA C terminal Apre_0106 PF01544 CorA-like Mg2+ transporter protein Apre_0108 PF00122 E1-E2 ATPase Apre_0108 PF00689 Cation transporting ATPase, C-terminus Apre_0108 PF00690 Cation transporter/ATPase, N-terminus Apre_0108 PF00702 haloacid dehalogenase-like hydrolase Apre_0109 PF05343 M42 glutamyl aminopeptidase Apre_0110 PF04525 Tubby C 2 Apre_0111 PF00356 Bacterial regulatory proteins, lacI family Apre_0111 PF13377 Periplasmic binding protein-like domain Apre_0113 PF09712 Apre_0113 Apre_0114 PF00561 alpha/beta hydrolase fold Apre_0115 PF01575 MaoC like domain Apre_0116 PF01758 Sodium Bile acid symporter family Apre_0117 PF02569 Pantoate-beta-alanine ligase Apre_0118 PF02261 Aspartate decarboxylase Apre_0119 PF09972 Apre_0119 Apre_0120 PF04011 LemA family Apre_0121 PF02386 Cation transport protein Apre_0122 PF02080 TrkA-C domain Apre_0122 PF02254 TrkA-N domain Apre_0123 PF04298 Apre_0123 Apre_0124 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) Apre_0126 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain Apre_0127 PF00004 ATPase family associated with various cellular activities (AAA) Apre_0127 PF02151 UvrB/uvrC motif Apre_0127 PF02861 Clp amino terminal domain Apre_0127 PF07724 AAA domain (Cdc48 subfamily) Apre_0127 PF10431 C-terminal, D2-small domain, of ClpB protein Apre_0131 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0132 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0133 PF00005 ABC transporter Apre_0133 PF08402 TOBE domain Apre_0134 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Apre_0135 PF04107 Glutamate-cysteine ligase family 2(GCS2) Apre_0136 PF13481 AAA domain Apre_0137 PF04205 FMN-binding domain Apre_0138 PF00890 FAD binding domain Apre_0138 PF04205 FMN-binding domain Apre_0139 PF00768 D-alanyl-D-alanine carboxypeptidase Apre_0140 PF03051 Peptidase C1-like family Apre_0141 PF01238 Phosphomannose isomerase type I Apre_0142 PF00005 ABC transporter Apre_0142 PF08402 TOBE domain Apre_0144 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0145 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0146 PF12010 Apre_0146 Apre_0146 PF13416 Bacterial extracellular solute-binding protein Apre_0147 PF12010 Apre_0147 Apre_0147 PF13416 Bacterial extracellular solute-binding protein Apre_0148 PF07555 beta-N-acetylglucosaminidase Apre_0149 PF01074 Glycosyl hydrolases family 38 N-terminal domain Apre_0149 PF07748 Glycosyl hydrolases family 38 C-terminal domain Apre_0149 PF09261 Alpha mannosidase, middle domain Apre_0150 PF06824 Protein of unknown function (DUF1237) Apre_0151 PF01380 SIS domain Apre_0151 PF01418 Helix-turn-helix domain, rpiR family Apre_0152 PF00480 ROK family Apre_0153 PF00232 Glycosyl hydrolase family 1 Apre_0154 PF00480 ROK family Apre_0155 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Apre_0156 PF13419 Haloacid dehalogenase-like hydrolase Apre_0157 PF03830 PTS system sorbose subfamily IIB component Apre_0158 PF13630 Apre_0158 Apre_0159 PF00534 Glycosyl transferases group 1 Apre_0159 PF13439 Glycosyltransferase Family 4 Apre_0160 PF00534 Glycosyl transferases group 1 Apre_0160 PF13439 Glycosyltransferase Family 4 Apre_0162 PF09862 Apre_0162 Apre_0163 PF13349 Apre_0163 Apre_0164 PF14897 Apre_0164 Apre_0166 PF09515 Thiamine transporter protein (Thia_YuaJ) Apre_0168 PF00005 ABC transporter Apre_0169 PF00392 Bacterial regulatory proteins, gntR family Apre_0170 PF00005 ABC transporter Apre_0172 PF00781 Diacylglycerol kinase catalytic domain Apre_0173 PF02559 CarD-like/TRCF domain Apre_0174 PF13638 PIN domain Apre_0175 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Apre_0176 PF02542 YgbB family Apre_0177 PF00438 S-adenosylmethionine synthetase, N-terminal domain Apre_0177 PF02772 S-adenosylmethionine synthetase, central domain Apre_0177 PF02773 S-adenosylmethionine synthetase, C-terminal domain Apre_0178 PF06723 MreB/Mbl protein Apre_0179 PF00300 Histidine phosphatase superfamily (branch 1) Apre_0180 PF00486 Transcriptional regulatory protein, C terminal Apre_0181 PF12822 Protein of unknown function (DUF3816) Apre_0182 PF02367 Uncharacterised P-loop hydrolase UPF0079 Apre_0183 PF00814 Glycoprotease family Apre_0184 PF00583 Acetyltransferase (GNAT) family Apre_0185 PF00814 Glycoprotease family Apre_0187 PF03572 Peptidase family S41 Apre_0187 PF14684 Tricorn protease C1 domain Apre_0188 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Apre_0188 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Apre_0189 PF03816 Cell envelope-related transcriptional attenuator domain Apre_0190 PF01070 FMN-dependent dehydrogenase Apre_0191 PF00392 Bacterial regulatory proteins, gntR family Apre_0192 PF00005 ABC transporter Apre_0193 PF13346 Apre_0193 Apre_0194 PF13684 Dihydroxyacetone kinase family Apre_0195 PF05816 Apre_0195 Apre_0196 PF10112 Apre_0196 Apre_0197 PF00675 Insulinase (Peptidase family M16) Apre_0197 PF05193 Peptidase M16 inactive domain Apre_0197 PF08367 Peptidase M16C associated Apre_0199 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Apre_0200 PF03610 PTS system fructose IIA component Apre_0200 PF03830 PTS system sorbose subfamily IIB component Apre_0201 PF03609 Apre_0201 Apre_0202 PF03613 Apre_0202 Apre_0203 PF06115 Apre_0203 Apre_0204 PF00009 Elongation factor Tu GTP binding domain Apre_0204 PF00679 Elongation factor G C-terminus Apre_0204 PF03144 Elongation factor Tu domain 2 Apre_0204 PF03764 Elongation factor G, domain IV Apre_0204 PF14492 Elongation Factor G, domain II Apre_0205 PF00128 Alpha amylase, catalytic domain Apre_0205 PF02806 Alpha amylase, C-terminal all-beta domain Apre_0205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Apre_0206 PF13472 GDSL-like Lipase/Acylhydrolase family Apre_0207 PF00924 Mechanosensitive ion channel Apre_0208 PF06107 Apre_0208 Apre_0209 PF11756 Apre_0209 Apre_0210 PF07878 Apre_0210 Apre_0211 PF01145 SPFH domain / Band 7 family Apre_0212 PF12146 Putative lysophospholipase Apre_0213 PF06962 Putative rRNA methylase Apre_0214 PF01381 Helix-turn-helix Apre_0215 PF00005 ABC transporter Apre_0215 PF00664 ABC transporter transmembrane region Apre_0216 PF08282 haloacid dehalogenase-like hydrolase Apre_0217 PF08282 haloacid dehalogenase-like hydrolase Apre_0218 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Apre_0219 PF03063 Prismane/CO dehydrogenase family Apre_0220 PF01546 Peptidase family M20/M25/M40 Apre_0220 PF07687 Peptidase dimerisation domain Apre_0221 PF14285 Apre_0221 Apre_0222 PF06114 Domain of unknown function (DUF955) Apre_0223 PF01381 Helix-turn-helix Apre_0224 PF00817 impB/mucB/samB family Apre_0224 PF11798 IMS family HHH motif Apre_0224 PF11799 impB/mucB/samB family C-terminal domain Apre_0225 PF00392 Bacterial regulatory proteins, gntR family Apre_0227 PF00005 ABC transporter Apre_0227 PF13732 Apre_0227 Apre_0228 PF12698 ABC-2 family transporter protein Apre_0229 PF00390 Malic enzyme, N-terminal domain Apre_0229 PF03949 Malic enzyme, NAD binding domain Apre_0230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Apre_0231 PF08282 haloacid dehalogenase-like hydrolase Apre_0232 PF00753 Metallo-beta-lactamase superfamily Apre_0233 PF01171 PP-loop family Apre_0234 PF02673 Apre_0234 Apre_0235 PF03352 Methyladenine glycosylase Apre_0236 PF02311 AraC-like ligand binding domain Apre_0236 PF12833 Helix-turn-helix domain Apre_0237 PF02065 Melibiase Apre_0237 PF16874 Apre_0237 Apre_0237 PF16875 Apre_0237 Apre_0238 PF01547 Bacterial extracellular solute-binding protein Apre_0239 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0240 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0241 PF00128 Alpha amylase, catalytic domain Apre_0242 PF00005 ABC transporter Apre_0243 PF00128 Alpha amylase, catalytic domain Apre_0243 PF16657 Apre_0243 Apre_0244 PF03616 Apre_0244 Apre_0245 PF00535 Glycosyl transferase family 2 Apre_0246 PF00535 Glycosyl transferase family 2 Apre_0249 PF08239 Bacterial SH3 domain Apre_0251 PF01548 Apre_0251 Apre_0251 PF02371 Apre_0251 Apre_0252 PF00005 ABC transporter Apre_0252 PF08402 TOBE domain Apre_0253 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0254 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0255 PF13416 Bacterial extracellular solute-binding protein Apre_0258 PF02274 Amidinotransferase Apre_0260 PF13489 Methyltransferase domain Apre_0261 PF13302 Acetyltransferase (GNAT) domain Apre_0262 PF00860 Permease family Apre_0264 PF07554 Uncharacterised Sugar-binding Domain Apre_0266 PF03572 Peptidase family S41 Apre_0266 PF13180 PDZ domain Apre_0267 PF00571 CBS domain Apre_0267 PF01769 Divalent cation transporter Apre_0267 PF03448 MgtE intracellular N domain Apre_0268 PF01643 Acyl-ACP thioesterase Apre_0271 PF04055 Radical SAM superfamily Apre_0272 PF01926 50S ribosome-binding GTPase Apre_0273 PF04055 Radical SAM superfamily Apre_0273 PF06968 Biotin and Thiamin Synthesis associated domain Apre_0274 PF00005 ABC transporter Apre_0274 PF09383 NIL domain Apre_0275 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0276 PF03180 NLPA lipoprotein Apre_0277 PF03180 NLPA lipoprotein Apre_0278 PF00375 Sodium:dicarboxylate symporter family Apre_0280 PF04204 Homoserine O-succinyltransferase Apre_0281 PF01053 Cys/Met metabolism PLP-dependent enzyme Apre_0282 PF00255 Glutathione peroxidase Apre_0284 PF00133 tRNA synthetases class I (I, L, M and V) Apre_0284 PF08264 Anticodon-binding domain of tRNA Apre_0285 PF00293 NUDIX domain Apre_0286 PF02388 FemAB family Apre_0287 PF00005 ABC transporter Apre_0289 PF02687 Apre_0289 Apre_0289 PF12704 MacB-like periplasmic core domain Apre_0290 PF03477 ATP cone domain Apre_0291 PF02590 Predicted SPOUT methyltransferase Apre_0292 PF01965 DJ-1/PfpI family Apre_0293 PF01266 FAD dependent oxidoreductase Apre_0293 PF04324 BFD-like [2Fe-2S] binding domain Apre_0294 PF00230 Major intrinsic protein Apre_0295 PF02608 Basic membrane protein Apre_0296 PF00005 ABC transporter Apre_0297 PF02653 Apre_0297 Apre_0298 PF02653 Apre_0298 Apre_0300 PF01212 Beta-eliminating lyase Apre_0302 PF01757 Apre_0302 Apre_0303 PF00877 NlpC/P60 family Apre_0305 PF04960 Glutaminase Apre_0306 PF07690 Major Facilitator Superfamily Apre_0307 PF01554 MatE Apre_0308 PF14542 GCN5-related N-acetyl-transferase Apre_0309 PF01156 Inosine-uridine preferring nucleoside hydrolase Apre_0310 PF13515 Apre_0310 Apre_0311 PF13515 Apre_0311 Apre_0313 PF07155 ECF-type riboflavin transporter, S component Apre_0314 PF14353 Apre_0314 Apre_0315 PF04055 Radical SAM superfamily Apre_0316 PF01546 Peptidase family M20/M25/M40 Apre_0317 PF01869 BadF/BadG/BcrA/BcrD ATPase family Apre_0317 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component Apre_0317 PF09989 Apre_0317 Apre_0319 PF05437 Apre_0319 Apre_0320 PF03591 Apre_0320 Apre_0322 PF12146 Putative lysophospholipase Apre_0326 PF01957 NfeD-like C-terminal, partner-binding Apre_0327 PF12127 Apre_0327 Apre_0329 PF02562 PhoH-like protein Apre_0330 PF01219 Prokaryotic diacylglycerol kinase Apre_0330 PF01569 PAP2 superfamily Apre_0330 PF02130 Uncharacterized protein family UPF0054 Apre_0331 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Apre_0332 PF01926 50S ribosome-binding GTPase Apre_0332 PF07650 KH domain Apre_0333 PF02565 Recombination protein O C terminal Apre_0333 PF11967 Recombination protein O N terminal Apre_0334 PF02091 Glycyl-tRNA synthetase alpha subunit Apre_0335 PF02092 Apre_0335 Apre_0336 PF03618 Apre_0336 Apre_0337 PF00117 Glutamine amidotransferase class-I Apre_0337 PF00958 GMP synthase C terminal domain Apre_0337 PF02540 NAD synthase Apre_0340 PF01381 Helix-turn-helix Apre_0341 PF13643 Apre_0341 Apre_0343 PF04383 KilA-N domain Apre_0344 PF03601 Apre_0344 Apre_0345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Apre_0345 PF03466 LysR substrate binding domain Apre_0346 PF01555 DNA methylase Apre_0346 PF12564 Apre_0346 Apre_0347 PF04851 Type III restriction enzyme, res subunit Apre_0348 PF13289 Apre_0348 Apre_0349 PF01935 Domain of unknown function DUF87 Apre_0349 PF05872 Apre_0349 Apre_0351 PF07724 AAA domain (Cdc48 subfamily) Apre_0352 PF12840 Helix-turn-helix domain Apre_0353 PF06953 Arsenical resistance operon trans-acting repressor ArsD Apre_0354 PF02374 Anion-transporting ATPase Apre_0355 PF01451 Low molecular weight phosphotyrosine protein phosphatase Apre_0356 PF01758 Sodium Bile acid symporter family Apre_0357 PF01979 Amidohydrolase family Apre_0358 PF00111 2Fe-2S iron-sulfur cluster binding domain Apre_0358 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Apre_0358 PF01799 [2Fe-2S] binding domain Apre_0358 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Apre_0360 PF12804 MobA-like NTP transferase domain Apre_0362 PF02625 XdhC and CoxI family Apre_0362 PF13478 XdhC Rossmann domain Apre_0364 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Apre_0365 PF00266 Aminotransferase class-V Apre_0366 PF11823 Apre_0366 Apre_0367 PF01206 Sulfurtransferase TusA Apre_0367 PF02635 DsrE/DsrF-like family Apre_0368 PF00586 AIR synthase related protein, N-terminal domain Apre_0368 PF02769 AIR synthase related protein, C-terminal domain Apre_0370 PF02457 DisA bacterial checkpoint controller nucleotide-binding Apre_0371 PF07949 YbbR-like protein Apre_0372 PF01743 Poly A polymerase head domain Apre_0372 PF12627 Probable RNA and SrmB- binding site of polymerase A Apre_0372 PF13735 tRNA nucleotidyltransferase domain 2 putative Apre_0373 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Apre_0373 PF05697 Bacterial trigger factor protein (TF) Apre_0373 PF05698 Bacterial trigger factor protein (TF) C-terminus Apre_0374 PF00574 Clp protease Apre_0375 PF06689 ClpX C4-type zinc finger Apre_0375 PF07724 AAA domain (Cdc48 subfamily) Apre_0375 PF10431 C-terminal, D2-small domain, of ClpB protein Apre_0376 PF00004 ATPase family associated with various cellular activities (AAA) Apre_0376 PF02190 ATP-dependent protease La (LON) domain Apre_0376 PF05362 Lon protease (S16) C-terminal proteolytic domain Apre_0377 PF01926 50S ribosome-binding GTPase Apre_0378 PF00890 FAD binding domain Apre_0378 PF04205 FMN-binding domain Apre_0379 PF03932 CutC family Apre_0380 PF00156 Phosphoribosyl transferase domain Apre_0381 PF00455 Apre_0381 Apre_0381 PF08220 DeoR-like helix-turn-helix domain Apre_0382 PF00294 pfkB family carbohydrate kinase Apre_0383 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Apre_0383 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Apre_0383 PF02378 Phosphotransferase system, EIIC Apre_0384 PF00561 alpha/beta hydrolase fold Apre_0385 PF02127 Aminopeptidase I zinc metalloprotease (M18) Apre_0386 PF01910 Domain of unknown function DUF77 Apre_0387 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Apre_0388 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0389 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0390 PF00005 ABC transporter Apre_0390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Apre_0391 PF00005 ABC transporter Apre_0392 PF17099 Apre_0392 Apre_0393 PF00860 Permease family Apre_0394 PF00571 CBS domain Apre_0394 PF01595 Apre_0394 Apre_0394 PF03471 Transporter associated domain Apre_0395 PF00571 CBS domain Apre_0395 PF01368 DHH family Apre_0395 PF02833 DHHA2 domain Apre_0395 PF07085 DRTGG domain Apre_0396 PF00293 NUDIX domain Apre_0397 PF00375 Sodium:dicarboxylate symporter family Apre_0399 PF08984 Domain of unknown function (DUF1858) Apre_0401 PF00183 Hsp90 protein Apre_0401 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0402 PF02127 Aminopeptidase I zinc metalloprotease (M18) Apre_0403 PF06257 Protein of unknown function (DUF1021) Apre_0404 PF02811 PHP domain Apre_0405 PF12646 Apre_0405 Apre_0407 PF00005 ABC transporter Apre_0409 PF01432 Peptidase family M3 Apre_0410 PF04263 Thiamin pyrophosphokinase, catalytic domain Apre_0410 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain Apre_0411 PF01594 Apre_0411 Apre_0413 PF02446 4-alpha-glucanotransferase Apre_0414 PF00343 Carbohydrate phosphorylase Apre_0415 PF02535 Apre_0415 Apre_0416 PF01501 Glycosyl transferase family 8 Apre_0417 PF00005 ABC transporter Apre_0417 PF00664 ABC transporter transmembrane region Apre_0418 PF00005 ABC transporter Apre_0418 PF00664 ABC transporter transmembrane region Apre_0419 PF12802 MarR family Apre_0423 PF12682 Flavodoxin Apre_0426 PF06803 Apre_0426 Apre_0427 PF01554 MatE Apre_0428 PF08543 Phosphomethylpyrimidine kinase Apre_0429 PF13091 PLD-like domain Apre_0430 PF00392 Bacterial regulatory proteins, gntR family Apre_0431 PF00005 ABC transporter Apre_0433 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Apre_0434 PF08282 haloacid dehalogenase-like hydrolase Apre_0435 PF00294 pfkB family carbohydrate kinase Apre_0436 PF01225 Mur ligase family, catalytic domain Apre_0436 PF02875 Mur ligase family, glutamate ligase domain Apre_0436 PF08245 Mur ligase middle domain Apre_0437 PF01820 D-ala D-ala ligase N-terminus Apre_0437 PF07478 D-ala D-ala ligase C-terminus Apre_0438 PF08239 Bacterial SH3 domain Apre_0439 PF13740 ACT domain Apre_0440 PF05167 Uncharacterised ACR (DUF711) Apre_0441 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Apre_0442 PF00120 Glutamine synthetase, catalytic domain Apre_0442 PF12437 Glutamine synthetase type III N terminal Apre_0443 PF06874 Apre_0443 Apre_0445 PF14512 Putative TM nitroreductase Apre_0446 PF00562 RNA polymerase Rpb2, domain 6 Apre_0446 PF04560 RNA polymerase Rpb2, domain 7 Apre_0446 PF04561 RNA polymerase Rpb2, domain 2 Apre_0446 PF04563 RNA polymerase beta subunit Apre_0446 PF04565 RNA polymerase Rpb2, domain 3 Apre_0446 PF10385 RNA polymerase beta subunit external 1 domain Apre_0447 PF00623 RNA polymerase Rpb1, domain 2 Apre_0447 PF04983 RNA polymerase Rpb1, domain 3 Apre_0447 PF04997 RNA polymerase Rpb1, domain 1 Apre_0447 PF04998 RNA polymerase Rpb1, domain 5 Apre_0447 PF05000 RNA polymerase Rpb1, domain 4 Apre_0448 PF00248 Aldo/keto reductase family Apre_0448 PF13534 4Fe-4S dicluster domain Apre_0449 PF00654 Voltage gated chloride channel Apre_0450 PF08000 Bacterial PH domain Apre_0451 PF01554 MatE Apre_0452 PF08534 Redoxin Apre_0453 PF00367 phosphotransferase system, EIIB Apre_0453 PF02378 Phosphotransferase system, EIIC Apre_0454 PF02056 Family 4 glycosyl hydrolase Apre_0454 PF11975 Family 4 glycosyl hydrolase C-terminal domain Apre_0455 PF01418 Helix-turn-helix domain, rpiR family Apre_0456 PF01380 SIS domain Apre_0456 PF01418 Helix-turn-helix domain, rpiR family Apre_0457 PF00164 Ribosomal protein S12/S23 Apre_0458 PF00177 Ribosomal protein S7p/S5e Apre_0459 PF00009 Elongation factor Tu GTP binding domain Apre_0459 PF00679 Elongation factor G C-terminus Apre_0459 PF03144 Elongation factor Tu domain 2 Apre_0459 PF03764 Elongation factor G, domain IV Apre_0459 PF14492 Elongation Factor G, domain II Apre_0460 PF00009 Elongation factor Tu GTP binding domain Apre_0460 PF03143 Elongation factor Tu C-terminal domain Apre_0460 PF03144 Elongation factor Tu domain 2 Apre_0461 PF01297 Periplasmic solute binding protein family Apre_0462 PF00005 ABC transporter Apre_0463 PF00950 Apre_0463 Apre_0465 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0466 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0466 PF12911 Apre_0466 Apre_0467 PF00005 ABC transporter Apre_0467 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Apre_0468 PF00005 ABC transporter Apre_0468 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Apre_0469 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Apre_0470 PF00892 EamA-like transporter family Apre_0473 PF00367 phosphotransferase system, EIIB Apre_0473 PF02378 Phosphotransferase system, EIIC Apre_0474 PF00128 Alpha amylase, catalytic domain Apre_0474 PF16657 Apre_0474 Apre_0476 PF09851 Apre_0476 Apre_0476 PF13421 Apre_0476 Apre_0478 PF00005 ABC transporter Apre_0478 PF02687 Apre_0478 Apre_0480 PF00375 Sodium:dicarboxylate symporter family Apre_0482 PF03576 Peptidase family S58 Apre_0483 PF01250 Ribosomal protein S6 Apre_0484 PF00436 Single-strand binding protein family Apre_0485 PF01084 Ribosomal protein S18 Apre_0486 PF03030 Inorganic H+ pyrophosphatase Apre_0487 PF00764 Arginosuccinate synthase Apre_0488 PF00206 Lyase Apre_0488 PF14698 Argininosuccinate lyase C-terminal Apre_0489 PF00497 Bacterial extracellular solute-binding proteins, family 3 Apre_0489 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0490 PF00005 ABC transporter Apre_0491 PF00288 GHMP kinases N terminal domain Apre_0491 PF08544 GHMP kinases C terminal Apre_0492 PF01177 Asp/Glu/Hydantoin racemase Apre_0493 PF02541 Ppx/GppA phosphatase family Apre_0494 PF02503 Polyphosphate kinase middle domain Apre_0494 PF13089 Polyphosphate kinase N-terminal domain Apre_0494 PF13090 Polyphosphate kinase C-terminal domain Apre_0495 PF02557 D-alanyl-D-alanine carboxypeptidase Apre_0496 PF01042 Endoribonuclease L-PSP Apre_0497 PF01546 Peptidase family M20/M25/M40 Apre_0497 PF07687 Peptidase dimerisation domain Apre_0498 PF00578 AhpC/TSA family Apre_0499 PF09223 YodA lipocalin-like domain Apre_0500 PF01297 Periplasmic solute binding protein family Apre_0501 PF00005 ABC transporter Apre_0502 PF00950 Apre_0502 Apre_0503 PF00171 Aldehyde dehydrogenase family Apre_0504 PF00753 Metallo-beta-lactamase superfamily Apre_0505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Apre_0505 PF00766 Electron transfer flavoprotein FAD-binding domain Apre_0505 PF02770 Acyl-CoA dehydrogenase, middle domain Apre_0505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Apre_0506 PF05014 Nucleoside 2-deoxyribosyltransferase Apre_0507 PF00795 Carbon-nitrogen hydrolase Apre_0507 PF02540 NAD synthase Apre_0508 PF00149 Calcineurin-like phosphoesterase Apre_0509 PF04321 RmlD substrate binding domain Apre_0510 PF00375 Sodium:dicarboxylate symporter family Apre_0511 PF14280 Apre_0511 Apre_0513 PF07669 Eco57I restriction-modification methylase Apre_0514 PF04851 Type III restriction enzyme, res subunit Apre_0515 PF01475 Ferric uptake regulator family Apre_0516 PF01297 Periplasmic solute binding protein family Apre_0517 PF00005 ABC transporter Apre_0518 PF00950 Apre_0518 Apre_0519 PF03883 Apre_0519 Apre_0520 PF00149 Calcineurin-like phosphoesterase Apre_0520 PF12320 Type 5 capsule protein repressor C-terminal domain Apre_0521 PF13476 AAA domain Apre_0521 PF13558 Putative exonuclease SbcCD, C subunit Apre_0522 PF12705 PD-(D/E)XK nuclease superfamily Apre_0523 PF00580 UvrD/REP helicase N-terminal domain Apre_0523 PF12705 PD-(D/E)XK nuclease superfamily Apre_0523 PF13361 UvrD-like helicase C-terminal domain Apre_0524 PF00149 Calcineurin-like phosphoesterase Apre_0526 PF09084 NMT1/THI5 like Apre_0527 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0528 PF00005 ABC transporter Apre_0529 PF02335 Cytochrome c552 Apre_0530 PF05140 Apre_0530 Apre_0533 PF01368 DHH family Apre_0533 PF02272 DHHA1 domain Apre_0534 PF01281 Ribosomal protein L9, N-terminal domain Apre_0534 PF03948 Ribosomal protein L9, C-terminal domain Apre_0535 PF00772 DnaB-like helicase N terminal domain Apre_0535 PF03796 DnaB-like helicase C terminal domain Apre_0536 PF13302 Acetyltransferase (GNAT) domain Apre_0537 PF07261 Replication initiation and membrane attachment Apre_0538 PF01695 IstB-like ATP binding protein Apre_0539 PF03853 YjeF-related protein N-terminus Apre_0540 PF02706 Chain length determinant protein Apre_0540 PF13807 Apre_0540 Apre_0541 PF13614 AAA domain Apre_0544 PF00106 short chain dehydrogenase Apre_0545 PF00248 Aldo/keto reductase family Apre_0546 PF00199 Catalase Apre_0546 PF06628 Catalase-related immune-responsive Apre_0547 PF00440 Bacterial regulatory proteins, tetR family Apre_0548 PF03176 MMPL family Apre_0550 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_0550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Apre_0551 PF00970 Oxidoreductase FAD-binding domain Apre_0551 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Apre_0552 PF00005 ABC transporter Apre_0552 PF00664 ABC transporter transmembrane region Apre_0553 PF00226 DnaJ domain Apre_0554 PF06738 Apre_0554 Apre_0555 PF12821 Apre_0555 Apre_0556 PF01625 Peptide methionine sulfoxide reductase Apre_0557 PF07373 Apre_0557 Apre_0558 PF07373 Apre_0558 Apre_0559 PF00112 Papain family cysteine protease Apre_0559 PF00581 Rhodanese-like domain Apre_0559 PF02368 Bacterial Ig-like domain (group 2) Apre_0560 PF03965 Penicillinase repressor Apre_0561 PF00122 E1-E2 ATPase Apre_0561 PF00702 haloacid dehalogenase-like hydrolase Apre_0563 PF01183 Glycosyl hydrolases family 25 Apre_0563 PF08230 Apre_0563 Apre_0564 PF02229 Transcriptional Coactivator p15 (PC4) Apre_0565 PF00266 Aminotransferase class-V Apre_0566 PF03054 tRNA methyl transferase Apre_0567 PF13354 Beta-lactamase enzyme family Apre_0568 PF01381 Helix-turn-helix Apre_0570 PF07373 Apre_0570 Apre_0574 PF01968 Hydantoinase/oxoprolinase Apre_0574 PF05378 Apre_0574 Apre_0576 PF02615 Malate/L-lactate dehydrogenase Apre_0577 PF06961 Apre_0577 Apre_0578 PF03309 Type III pantothenate kinase Apre_0579 PF12822 Protein of unknown function (DUF3816) Apre_0580 PF01757 Apre_0580 Apre_0581 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Apre_0581 PF02403 Seryl-tRNA synthetase N-terminal domain Apre_0582 PF03372 Endonuclease/Exonuclease/phosphatase family Apre_0583 PF00849 RNA pseudouridylate synthase Apre_0583 PF01479 S4 domain Apre_0584 PF01078 Magnesium chelatase, subunit ChlI Apre_0584 PF13335 Apre_0584 Apre_0584 PF13541 Subunit ChlI of Mg-chelatase Apre_0585 PF00437 Type II/IV secretion system protein Apre_0588 PF04014 Antidote-toxin recognition MazE Apre_0591 PF01381 Helix-turn-helix Apre_0594 PF01255 Putative undecaprenyl diphosphate synthase Apre_0595 PF01148 Cytidylyltransferase family Apre_0596 PF02163 Peptidase family M50 Apre_0596 PF13180 PDZ domain Apre_0597 PF04551 GcpE protein Apre_0598 PF00929 Exonuclease Apre_0598 PF02811 PHP domain Apre_0598 PF07733 Bacterial DNA polymerase III alpha subunit Apre_0598 PF14579 Helix-hairpin-helix motif Apre_0603 PF07728 AAA domain (dynein-related subfamily) Apre_0605 PF02554 Apre_0605 Apre_0605 PF13722 Apre_0605 Apre_0606 PF02576 Uncharacterised BCR, YhbC family COG0779 Apre_0607 PF00575 S1 RNA binding domain Apre_0607 PF08529 NusA N-terminal domain Apre_0607 PF13184 NusA-like KH domain Apre_0608 PF04296 Protein of unknown function (DUF448) Apre_0609 PF00009 Elongation factor Tu GTP binding domain Apre_0609 PF04760 Translation initiation factor IF-2, N-terminal region Apre_0609 PF11987 Translation-initiation factor 2 Apre_0610 PF02033 Ribosome-binding factor A Apre_0611 PF01368 DHH family Apre_0611 PF02272 DHHA1 domain Apre_0612 PF01509 TruB family pseudouridylate synthase (N terminal domain) Apre_0612 PF16198 Apre_0612 Apre_0613 PF01687 Riboflavin kinase Apre_0613 PF06574 FAD synthetase Apre_0614 PF00312 Ribosomal protein S15 Apre_0615 PF00013 KH domain Apre_0615 PF00575 S1 RNA binding domain Apre_0615 PF01138 3' exoribonuclease family, domain 1 Apre_0615 PF03725 3' exoribonuclease family, domain 2 Apre_0615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Apre_0616 PF01580 FtsK/SpoIIIE family Apre_0616 PF09397 Ftsk gamma domain Apre_0616 PF13491 Apre_0616 Apre_0617 PF01066 CDP-alcohol phosphatidyltransferase Apre_0618 PF00154 recA bacterial DNA recombination protein Apre_0619 PF00817 impB/mucB/samB family Apre_0619 PF11799 impB/mucB/samB family C-terminal domain Apre_0620 PF01479 S4 domain Apre_0621 PF04977 Septum formation initiator Apre_0622 PF01171 PP-loop family Apre_0622 PF11734 TilS substrate C-terminal domain Apre_0623 PF00156 Phosphoribosyl transferase domain Apre_0624 PF06173 Apre_0624 Apre_0625 PF03309 Type III pantothenate kinase Apre_0626 PF01207 Dihydrouridine synthase (Dus) Apre_0627 PF01272 Transcription elongation factor, GreA/GreB, C-term Apre_0627 PF03449 Transcription elongation factor, N-terminal Apre_0628 PF00152 tRNA synthetases class II (D, K and N) Apre_0628 PF01336 OB-fold nucleic acid binding domain Apre_0628 PF01588 Putative tRNA binding domain Apre_0631 PF12650 Apre_0631 Apre_0633 PF00781 Diacylglycerol kinase catalytic domain Apre_0634 PF01497 Periplasmic binding protein Apre_0635 PF01032 FecCD transport family Apre_0636 PF01032 FecCD transport family Apre_0637 PF00005 ABC transporter Apre_0638 PF09587 Bacterial capsule synthesis protein PGA_cap Apre_0639 PF01569 PAP2 superfamily Apre_0640 PF12730 Apre_0640 Apre_0642 PF00005 ABC transporter Apre_0643 PF00072 Response regulator receiver domain Apre_0643 PF00486 Transcriptional regulatory protein, C terminal Apre_0644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0645 PF01554 MatE Apre_0646 PF00696 Amino acid kinase family Apre_0647 PF01765 Ribosome recycling factor Apre_0648 PF00482 Type II secretion system (T2SS), protein F Apre_0649 PF07963 Prokaryotic N-terminal methylation motif Apre_0650 PF01478 Type IV leader peptidase family Apre_0650 PF06750 Apre_0650 Apre_0651 PF07963 Prokaryotic N-terminal methylation motif Apre_0652 PF07963 Prokaryotic N-terminal methylation motif Apre_0653 PF07963 Prokaryotic N-terminal methylation motif Apre_0655 PF00871 Acetokinase family Apre_0656 PF01783 Ribosomal L32p protein family Apre_0657 PF02504 Fatty acid synthesis protein Apre_0658 PF00550 Phosphopantetheine attachment site Apre_0659 PF00035 Double-stranded RNA binding motif Apre_0659 PF14622 Ribonuclease-III-like Apre_0660 PF04055 Radical SAM superfamily Apre_0660 PF16199 Apre_0660 Apre_0661 PF02463 RecF/RecN/SMC N terminal domain Apre_0661 PF06470 SMC proteins Flexible Hinge Domain Apre_0662 PF01327 Polypeptide deformylase Apre_0663 PF00551 Formyl transferase Apre_0663 PF02911 Formyl transferase, C-terminal domain Apre_0664 PF01029 NusB family Apre_0664 PF01189 NOL1/NOP2/sun family Apre_0665 PF04055 Radical SAM superfamily Apre_0665 PF13394 4Fe-4S single cluster domain Apre_0666 PF13672 Protein phosphatase 2C Apre_0667 PF00069 Protein kinase domain Apre_0667 PF03793 PASTA domain Apre_0668 PF03193 Protein of unknown function, DUF258 Apre_0668 PF16745 Apre_0668 Apre_0669 PF00834 Ribulose-phosphate 3 epimerase family Apre_0670 PF00830 Ribosomal L28 family Apre_0671 PF01565 FAD binding domain Apre_0671 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Apre_0672 PF03668 Apre_0672 Apre_0673 PF13350 Tyrosine phosphatase family Apre_0674 PF02650 WhiA C-terminal HTH domain Apre_0674 PF10298 WhiA N-terminal LAGLIDADG-like domain Apre_0674 PF14527 WhiA LAGLIDADG-like domain Apre_0675 PF01336 OB-fold nucleic acid binding domain Apre_0675 PF02811 PHP domain Apre_0675 PF07733 Bacterial DNA polymerase III alpha subunit Apre_0675 PF14579 Helix-hairpin-helix motif Apre_0676 PF00365 Phosphofructokinase Apre_0677 PF00224 Pyruvate kinase, barrel domain Apre_0677 PF00391 PEP-utilising enzyme, mobile domain Apre_0677 PF02887 Pyruvate kinase, alpha/beta domain Apre_0678 PF05958 tRNA (Uracil-5-)-methyltransferase Apre_0679 PF13338 Apre_0679 Apre_0680 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Apre_0681 PF13175 AAA ATPase domain Apre_0682 PF13245 Part of AAA domain Apre_0682 PF13538 UvrD-like helicase C-terminal domain Apre_0683 PF05713 Apre_0683 Apre_0684 PF00440 Bacterial regulatory proteins, tetR family Apre_0685 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0686 PF00528 Binding-protein-dependent transport system inner membrane component Apre_0687 PF00005 ABC transporter Apre_0688 PF00005 ABC transporter Apre_0689 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Apre_0690 PF00005 ABC transporter Apre_0690 PF00664 ABC transporter transmembrane region Apre_0691 PF00005 ABC transporter Apre_0691 PF00664 ABC transporter transmembrane region Apre_0693 PF00239 Resolvase, N terminal domain Apre_0693 PF07508 Recombinase Apre_0693 PF13408 Recombinase zinc beta ribbon domain Apre_0697 PF04324 BFD-like [2Fe-2S] binding domain Apre_0699 PF03596 Apre_0699 Apre_0701 PF01297 Periplasmic solute binding protein family Apre_0702 PF00005 ABC transporter Apre_0703 PF00950 Apre_0703 Apre_0704 PF00950 Apre_0704 Apre_0705 PF01325 Iron dependent repressor, N-terminal DNA binding domain Apre_0705 PF02742 Iron dependent repressor, metal binding and dimerisation domain Apre_0706 PF12833 Helix-turn-helix domain Apre_0707 PF00005 ABC transporter Apre_0707 PF00664 ABC transporter transmembrane region Apre_0708 PF00005 ABC transporter Apre_0708 PF00664 ABC transporter transmembrane region Apre_0711 PF08241 Methyltransferase domain Apre_0712 PF14196 Apre_0712 Apre_0713 PF12697 Alpha/beta hydrolase family Apre_0721 PF02814 UreE urease accessory protein, N-terminal domain Apre_0721 PF05194 UreE urease accessory protein, C-terminal domain Apre_0722 PF01730 UreF Apre_0723 PF02492 CobW/HypB/UreG, nucleotide-binding domain Apre_0724 PF01774 UreD urease accessory protein Apre_0725 PF00547 Urease, gamma subunit Apre_0726 PF00699 Urease beta subunit Apre_0727 PF00449 Urease alpha-subunit, N-terminal domain Apre_0727 PF01979 Amidohydrolase family Apre_0729 PF01548 Apre_0729 Apre_0729 PF02371 Apre_0729 Apre_0734 PF08797 HIRAN domain Apre_0737 PF01381 Helix-turn-helix Apre_0739 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Apre_0740 PF13673 Acetyltransferase (GNAT) domain Apre_0741 PF00072 Response regulator receiver domain Apre_0741 PF00486 Transcriptional regulatory protein, C terminal Apre_0742 PF00512 His Kinase A (phospho-acceptor) domain Apre_0742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0743 PF00005 ABC transporter Apre_0744 PF02687 Apre_0744 Apre_0745 PF03572 Peptidase family S41 Apre_0745 PF14684 Tricorn protease C1 domain Apre_0747 PF00575 S1 RNA binding domain Apre_0747 PF09371 Tex-like protein N-terminal domain Apre_0747 PF12836 Helix-hairpin-helix motif Apre_0747 PF16921 Apre_0747 Apre_0748 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Apre_0748 PF03129 Anticodon binding domain Apre_0748 PF04073 Aminoacyl-tRNA editing domain Apre_0749 PF01116 Fructose-bisphosphate aldolase class-II Apre_0750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Apre_0750 PF07497 Rho termination factor, RNA-binding domain Apre_0750 PF07498 Rho termination factor, N-terminal domain Apre_0751 PF01197 Ribosomal protein L31 Apre_0752 PF13847 Methyltransferase domain Apre_0753 PF00472 RF-1 domain Apre_0753 PF03462 PCRF domain Apre_0754 PF01545 Cation efflux family Apre_0754 PF16916 Apre_0754 Apre_0755 PF01300 Telomere recombination Apre_0755 PF03481 Putative GTP-binding controlling metal-binding Apre_0756 PF14681 Uracil phosphoribosyltransferase Apre_0757 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Apre_0758 PF13538 UvrD-like helicase C-terminal domain Apre_0758 PF13604 AAA domain Apre_0758 PF14490 Helix-hairpin-helix containing domain Apre_0758 PF14520 Helix-hairpin-helix domain Apre_0759 PF00156 Phosphoribosyl transferase domain Apre_0760 PF01098 Apre_0760 Apre_0761 PF00633 Helix-hairpin-helix motif Apre_0761 PF00730 HhH-GPD superfamily base excision DNA repair protein Apre_0762 PF08282 haloacid dehalogenase-like hydrolase Apre_0763 PF00588 SpoU rRNA Methylase family Apre_0764 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_0765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Apre_0765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Apre_0766 PF00162 Phosphoglycerate kinase Apre_0767 PF00121 Triosephosphate isomerase Apre_0768 PF00113 Enolase, C-terminal TIM barrel domain Apre_0768 PF03952 Enolase, N-terminal domain Apre_0769 PF03840 Preprotein translocase SecG subunit Apre_0770 PF00575 S1 RNA binding domain Apre_0770 PF00773 RNB domain Apre_0770 PF08206 Ribonuclease B OB domain Apre_0771 PF01668 SmpB protein Apre_0772 PF02511 Thymidylate synthase complementing protein Apre_0773 PF00005 ABC transporter Apre_0774 PF02687 Apre_0774 Apre_0775 PF00300 Histidine phosphatase superfamily (branch 1) Apre_0776 PF12850 Calcineurin-like phosphoesterase superfamily domain Apre_0777 PF13514 AAA domain Apre_0778 PF00149 Calcineurin-like phosphoesterase Apre_0779 PF01928 CYTH domain Apre_0780 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Apre_0780 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Apre_0781 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Apre_0781 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Apre_0782 PF01979 Amidohydrolase family Apre_0783 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Apre_0784 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Apre_0785 PF01180 Dihydroorotate dehydrogenase Apre_0786 PF00156 Phosphoribosyl transferase domain Apre_0787 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Apre_0788 PF02806 Alpha amylase, C-terminal all-beta domain Apre_0788 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Apre_0789 PF00571 CBS domain Apre_0790 PF12169 DNA polymerase III subunits gamma and tau domain III Apre_0790 PF13177 DNA polymerase III, delta subunit Apre_0791 PF02575 YbaB/EbfC DNA-binding family Apre_0792 PF02132 RecR protein Apre_0792 PF13662 Toprim domain Apre_0794 PF00251 Glycosyl hydrolases family 32 N-terminal domain Apre_0794 PF08244 Glycosyl hydrolases family 32 C terminal Apre_0795 PF00589 Phage integrase family Apre_0795 PF14657 Apre_0795 Apre_0795 PF14659 Phage integrase, N-terminal SAM-like domain Apre_0797 PF00717 Peptidase S24-like Apre_0797 PF01381 Helix-turn-helix Apre_0798 PF01381 Helix-turn-helix Apre_0799 PF12728 Helix-turn-helix domain Apre_0804 PF05565 Apre_0804 Apre_0805 PF04404 Apre_0805 Apre_0809 PF01695 IstB-like ATP binding protein Apre_0811 PF00436 Single-strand binding protein family Apre_0813 PF05866 Endodeoxyribonuclease RusA Apre_0830 PF02195 ParB-like nuclease domain Apre_0832 PF00438 S-adenosylmethionine synthetase, N-terminal domain Apre_0834 PF03237 Terminase-like family Apre_0834 PF17289 Apre_0834 Apre_0835 PF05133 Phage portal protein, SPP1 Gp6-like Apre_0836 PF04233 Apre_0836 Apre_0839 PF14265 Apre_0839 Apre_0840 PF05065 Phage capsid family Apre_0846 PF11863 Apre_0846 Apre_0849 PF10145 Apre_0849 Apre_0854 PF10934 Apre_0854 Apre_0855 PF04865 Apre_0855 Apre_0864 PF05382 Apre_0864 Apre_0864 PF08460 Bacterial SH3 domain Apre_0865 PF16938 Apre_0865 Apre_0868 PF00483 Nucleotidyl transferase Apre_0870 PF00534 Glycosyl transferases group 1 Apre_0870 PF08323 Starch synthase catalytic domain Apre_0871 PF00343 Carbohydrate phosphorylase Apre_0872 PF00128 Alpha amylase, catalytic domain Apre_0872 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Apre_0873 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Apre_0873 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Apre_0873 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Apre_0873 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Apre_0874 PF00498 FHA domain Apre_0875 PF01098 Apre_0875 Apre_0876 PF00905 Penicillin binding protein transpeptidase domain Apre_0877 PF01513 ATP-NAD kinase Apre_0878 PF00849 RNA pseudouridylate synthase Apre_0879 PF12732 Apre_0879 Apre_0881 PF00356 Bacterial regulatory proteins, lacI family Apre_0881 PF13377 Periplasmic binding protein-like domain Apre_0882 PF00381 PTS HPr component phosphorylation site Apre_0883 PF00391 PEP-utilising enzyme, mobile domain Apre_0883 PF02896 PEP-utilising enzyme, TIM barrel domain Apre_0883 PF05524 PEP-utilising enzyme, N-terminal Apre_0885 PF02588 Apre_0885 Apre_0885 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Apre_0887 PF13616 PPIC-type PPIASE domain Apre_0889 PF06949 Apre_0889 Apre_0890 PF04055 Radical SAM superfamily Apre_0890 PF16199 Apre_0890 Apre_0893 PF00849 RNA pseudouridylate synthase Apre_0894 PF00480 ROK family Apre_0895 PF00072 Response regulator receiver domain Apre_0895 PF00486 Transcriptional regulatory protein, C terminal Apre_0896 PF00512 His Kinase A (phospho-acceptor) domain Apre_0896 PF00672 HAMP domain Apre_0896 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0898 PF01725 Ham1 family Apre_0899 PF12850 Calcineurin-like phosphoesterase superfamily domain Apre_0901 PF12710 haloacid dehalogenase-like hydrolase Apre_0903 PF02075 Crossover junction endodeoxyribonuclease RuvC Apre_0904 PF01330 RuvA N terminal domain Apre_0904 PF07499 RuvA, C-terminal domain Apre_0904 PF14520 Helix-hairpin-helix domain Apre_0905 PF05491 Holliday junction DNA helicase ruvB C-terminus Apre_0905 PF05496 Holliday junction DNA helicase ruvB N-terminus Apre_0906 PF02547 Queuosine biosynthesis protein Apre_0907 PF01702 Queuine tRNA-ribosyltransferase Apre_0908 PF02699 Preprotein translocase subunit Apre_0909 PF01368 DHH family Apre_0909 PF02272 DHHA1 domain Apre_0910 PF02824 TGS domain Apre_0910 PF04607 Region found in RelA / SpoT proteins Apre_0910 PF13291 ACT domain Apre_0910 PF13328 HD domain Apre_0911 PF02580 D-Tyr-tRNA(Tyr) deacylase Apre_0912 PF00753 Metallo-beta-lactamase superfamily Apre_0913 PF00152 tRNA synthetases class II (D, K and N) Apre_0913 PF01336 OB-fold nucleic acid binding domain Apre_0913 PF02938 GAD domain Apre_0914 PF04246 Apre_0914 Apre_0915 PF00464 Serine hydroxymethyltransferase Apre_0916 PF01926 50S ribosome-binding GTPase Apre_0916 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Apre_0917 PF02660 Apre_0917 Apre_0918 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Apre_0918 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Apre_0919 PF04472 Protein of unknown function (DUF552) Apre_0920 PF01479 S4 domain Apre_0921 PF01252 Apre_0921 Apre_0922 PF03167 Uracil DNA glycosylase superfamily Apre_0923 PF13482 RNase_H superfamily Apre_0924 PF00266 Aminotransferase class-V Apre_0925 PF02568 Thiamine biosynthesis protein (ThiI) Apre_0925 PF02926 THUMP domain Apre_0926 PF00829 Ribosomal prokaryotic L21 protein Apre_0927 PF04327 Protein of unknown function (DUF464) Apre_0928 PF01016 Ribosomal L27 protein Apre_0929 PF01018 GTP1/OBG Apre_0929 PF01926 50S ribosome-binding GTPase Apre_0929 PF09269 Domain of unknown function (DUF1967) Apre_0930 PF01985 CRS1 / YhbY (CRM) domain Apre_0931 PF01467 Cytidylyltransferase Apre_0932 PF01966 HD domain Apre_0933 PF02410 Oligomerisation domain Apre_0934 PF10531 SLBB domain Apre_0934 PF12836 Helix-hairpin-helix motif Apre_0935 PF02082 Transcriptional regulator Apre_0936 PF01411 tRNA synthetases class II (A) Apre_0936 PF02272 DHHA1 domain Apre_0936 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Apre_0937 PF06135 Apre_0937 Apre_0938 PF03652 Uncharacterised protein family (UPF0081) Apre_0939 PF06949 Apre_0939 Apre_0940 PF01475 Ferric uptake regulator family Apre_0941 PF00753 Metallo-beta-lactamase superfamily Apre_0941 PF07521 RNA-metabolising metallo-beta-lactamase Apre_0942 PF01596 O-methyltransferase Apre_0943 PF01136 Apre_0943 Apre_0943 PF16325 Apre_0943 Apre_0945 PF01546 Peptidase family M20/M25/M40 Apre_0945 PF07687 Peptidase dimerisation domain Apre_0946 PF00692 dUTPase Apre_0948 PF00488 MutS domain V Apre_0948 PF01624 MutS domain I Apre_0948 PF05188 MutS domain II Apre_0948 PF05190 MutS family domain IV Apre_0948 PF05192 MutS domain III Apre_0949 PF01119 DNA mismatch repair protein, C-terminal domain Apre_0949 PF08676 MutL C terminal dimerisation domain Apre_0949 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_0950 PF01715 IPP transferase Apre_0951 PF06838 Methionine gamma-lyase Apre_0952 PF00589 Phage integrase family Apre_0952 PF13495 Phage integrase, N-terminal SAM-like domain Apre_0953 PF00013 KH domain Apre_0953 PF01966 HD domain Apre_0953 PF12072 Apre_0953 Apre_0954 PF00132 Bacterial transferase hexapeptide (six repeats) Apre_0955 PF00291 Pyridoxal-phosphate dependent enzyme Apre_0956 PF00889 Elongation factor TS Apre_0957 PF00318 Ribosomal protein S2 Apre_0958 PF00448 SRP54-type protein, GTPase domain Apre_0958 PF02881 SRP54-type protein, helical bundle domain Apre_0959 PF00270 DEAD/DEAH box helicase Apre_0959 PF00271 Helicase conserved C-terminal domain Apre_0960 PF02441 Flavoprotein Apre_0960 PF04127 DNA / pantothenate metabolism flavoprotein Apre_0961 PF01192 RNA polymerase Rpb6 Apre_0962 PF00625 Guanylate kinase Apre_0963 PF05670 Apre_0963 Apre_0963 PF05833 Fibronectin-binding protein A N-terminus (FbpA) Apre_0964 PF00216 Bacterial DNA-binding protein Apre_0965 PF13623 Apre_0965 Apre_0966 PF13616 PPIC-type PPIASE domain Apre_0966 PF13624 SurA N-terminal domain Apre_0967 PF00270 DEAD/DEAH box helicase Apre_0967 PF00271 Helicase conserved C-terminal domain Apre_0967 PF02559 CarD-like/TRCF domain Apre_0967 PF03461 TRCF domain Apre_0968 PF01195 Peptidyl-tRNA hydrolase Apre_0969 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Apre_0969 PF14572 Phosphoribosyl synthetase-associated domain Apre_0970 PF00132 Bacterial transferase hexapeptide (six repeats) Apre_0970 PF00483 Nucleotidyl transferase Apre_0971 PF01048 Phosphorylase superfamily Apre_0972 PF02502 Ribose/Galactose Isomerase Apre_0973 PF01225 Mur ligase family, catalytic domain Apre_0973 PF02875 Mur ligase family, glutamate ligase domain Apre_0973 PF08245 Mur ligase middle domain Apre_0974 PF02452 PemK-like protein Apre_0975 PF00842 Alanine racemase, C-terminal domain Apre_0975 PF01168 Alanine racemase, N-terminal domain Apre_0976 PF01256 Carbohydrate kinase Apre_0976 PF01648 4'-phosphopantetheinyl transferase superfamily Apre_0977 PF01979 Amidohydrolase family Apre_0978 PF02637 GatB domain Apre_0978 PF02934 GatB/GatE catalytic domain Apre_0979 PF01425 Amidase Apre_0980 PF02686 Glu-tRNAGln amidotransferase C subunit Apre_0981 PF00533 BRCA1 C Terminus (BRCT) domain Apre_0981 PF01653 NAD-dependent DNA ligase adenylation domain Apre_0981 PF03120 NAD-dependent DNA ligase OB-fold domain Apre_0981 PF12826 Helix-hairpin-helix motif Apre_0981 PF14520 Helix-hairpin-helix domain Apre_0982 PF00580 UvrD/REP helicase N-terminal domain Apre_0982 PF13361 UvrD-like helicase C-terminal domain Apre_0983 PF01371 Trp repressor protein Apre_0984 PF07685 CobB/CobQ-like glutamine amidotransferase domain Apre_0985 PF08245 Mur ligase middle domain Apre_0985 PF08353 Apre_0985 Apre_0986 PF00708 Acylphosphatase Apre_0987 PF00122 E1-E2 ATPase Apre_0987 PF00403 Heavy-metal-associated domain Apre_0987 PF00702 haloacid dehalogenase-like hydrolase Apre_0988 PF02583 Metal-sensitive transcriptional repressor Apre_0989 PF03780 Apre_0989 Apre_0990 PF06177 Apre_0990 Apre_0991 PF13529 Peptidase_C39 like family Apre_0992 PF14131 Domain of unknown function (DUF4298) Apre_0993 PF00144 Beta-lactamase Apre_0994 PF05958 tRNA (Uracil-5-)-methyltransferase Apre_0995 PF06733 DEAD_2 Apre_0995 PF13307 Helicase C-terminal domain Apre_0996 PF00881 Nitroreductase family Apre_0997 PF12822 Protein of unknown function (DUF3816) Apre_0998 PF04536 TLP18 Apre_0999 PF04011 LemA family Apre_1000 PF13353 4Fe-4S single cluster domain Apre_1001 PF03477 ATP cone domain Apre_1001 PF13597 Anaerobic ribonucleoside-triphosphate reductase Apre_1002 PF00004 ATPase family associated with various cellular activities (AAA) Apre_1002 PF02861 Clp amino terminal domain Apre_1002 PF07724 AAA domain (Cdc48 subfamily) Apre_1002 PF10431 C-terminal, D2-small domain, of ClpB protein Apre_1003 PF00226 DnaJ domain Apre_1003 PF01556 DnaJ C terminal domain Apre_1004 PF00156 Phosphoribosyl transferase domain Apre_1005 PF03816 Cell envelope-related transcriptional attenuator domain Apre_1006 PF01276 Orn/Lys/Arg decarboxylase, major domain Apre_1006 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Apre_1007 PF13165 Apre_1007 Apre_1008 PF04055 Radical SAM superfamily Apre_1008 PF13353 4Fe-4S single cluster domain Apre_1009 PF01813 ATP synthase subunit D Apre_1010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Apre_1011 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Apre_1011 PF02874 ATP synthase alpha/beta family, beta-barrel domain Apre_1011 PF16886 Apre_1011 Apre_1012 PF01991 ATP synthase (E/31 kDa) subunit Apre_1013 PF01990 ATP synthase (F/14-kDa) subunit Apre_1014 PF00137 ATP synthase subunit C Apre_1015 PF01496 V-type ATPase 116kDa subunit family Apre_1017 PF01992 ATP synthase (C/AC39) subunit Apre_1018 PF00919 Uncharacterized protein family UPF0004 Apre_1018 PF01938 TRAM domain Apre_1018 PF04055 Radical SAM superfamily Apre_1019 PF00575 S1 RNA binding domain Apre_1019 PF02401 LytB protein Apre_1020 PF01553 Acyltransferase Apre_1021 PF02224 Cytidylate kinase Apre_1022 PF03486 HI0933-like protein Apre_1023 PF00849 RNA pseudouridylate synthase Apre_1023 PF01479 S4 domain Apre_1024 PF04079 Putative transcriptional regulators (Ypuh-like) Apre_1025 PF02616 ScpA/B protein Apre_1026 PF00293 NUDIX domain Apre_1027 PF13476 AAA domain Apre_1028 PF01316 Arginine repressor, DNA binding domain Apre_1028 PF02863 Arginine repressor, C-terminal domain Apre_1029 PF00348 Polyprenyl synthetase Apre_1030 PF02609 Exonuclease VII small subunit Apre_1031 PF02601 Apre_1031 Apre_1031 PF13742 Apre_1031 Apre_1032 PF01029 NusB family Apre_1033 PF03780 Apre_1033 Apre_1034 PF01132 Elongation factor P (EF-P) OB domain Apre_1034 PF08207 Elongation factor P (EF-P) KOW-like domain Apre_1034 PF09285 Elongation factor P, C-terminal Apre_1035 PF05636 HIGH Nucleotidyl Transferase Apre_1037 PF01467 Cytidylyltransferase Apre_1038 PF03602 Conserved hypothetical protein 95 Apre_1039 PF00270 DEAD/DEAH box helicase Apre_1039 PF00271 Helicase conserved C-terminal domain Apre_1039 PF17191 Apre_1039 Apre_1040 PF02734 DAK2 domain Apre_1040 PF13684 Dihydroxyacetone kinase family Apre_1041 PF03780 Apre_1041 Apre_1042 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Apre_1042 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Apre_1042 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Apre_1042 PF10371 Domain of unknown function Apre_1042 PF12838 4Fe-4S dicluster domain Apre_1042 PF17147 Apre_1042 Apre_1043 PF02603 HPr Serine kinase N terminus Apre_1043 PF07475 HPr Serine kinase C-terminal domain Apre_1044 PF01541 GIY-YIG catalytic domain Apre_1044 PF02151 UvrB/uvrC motif Apre_1044 PF08459 UvrC Helix-hairpin-helix N-terminal Apre_1044 PF12826 Helix-hairpin-helix motif Apre_1045 PF00557 Metallopeptidase family M24 Apre_1045 PF01321 Creatinase/Prolidase N-terminal domain Apre_1045 PF16188 Apre_1045 Apre_1045 PF16189 Apre_1045 Apre_1046 PF01926 50S ribosome-binding GTPase Apre_1046 PF06071 Protein of unknown function (DUF933) Apre_1047 PF00265 Thymidine kinase Apre_1048 PF00557 Metallopeptidase family M24 Apre_1049 PF14512 Putative TM nitroreductase Apre_1050 PF00580 UvrD/REP helicase N-terminal domain Apre_1050 PF13361 UvrD-like helicase C-terminal domain Apre_1051 PF02875 Mur ligase family, glutamate ligase domain Apre_1051 PF08245 Mur ligase middle domain Apre_1052 PF01965 DJ-1/PfpI family Apre_1054 PF14014 Apre_1054 Apre_1055 PF02390 Putative methyltransferase Apre_1056 PF02645 Uncharacterised protein, DegV family COG1307 Apre_1057 PF01590 GAF domain Apre_1058 PF00462 Glutaredoxin Apre_1058 PF03960 ArsC family Apre_1059 PF01546 Peptidase family M20/M25/M40 Apre_1059 PF07687 Peptidase dimerisation domain Apre_1060 PF00465 Iron-containing alcohol dehydrogenase Apre_1061 PF02645 Uncharacterised protein, DegV family COG1307 Apre_1062 PF00291 Pyridoxal-phosphate dependent enzyme Apre_1063 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase Apre_1063 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Apre_1063 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Apre_1063 PF10371 Domain of unknown function Apre_1063 PF13484 Apre_1063 Apre_1063 PF17147 Apre_1063 Apre_1064 PF00375 Sodium:dicarboxylate symporter family Apre_1065 PF00056 lactate/malate dehydrogenase, NAD binding domain Apre_1065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Apre_1066 PF09924 Uncharacterized conserved protein (DUF2156) Apre_1067 PF00561 alpha/beta hydrolase fold Apre_1068 PF00571 CBS domain Apre_1068 PF01769 Divalent cation transporter Apre_1068 PF03448 MgtE intracellular N domain Apre_1069 PF01546 Peptidase family M20/M25/M40 Apre_1069 PF07687 Peptidase dimerisation domain Apre_1070 PF13419 Haloacid dehalogenase-like hydrolase Apre_1071 PF02545 Maf-like protein Apre_1072 PF07722 Peptidase C26 Apre_1073 PF11070 Apre_1073 Apre_1074 PF00440 Bacterial regulatory proteins, tetR family Apre_1075 PF09529 Apre_1075 Apre_1076 PF13091 PLD-like domain Apre_1077 PF01926 50S ribosome-binding GTPase Apre_1077 PF05128 Apre_1077 Apre_1078 PF00892 EamA-like transporter family Apre_1079 PF13450 NAD(P)-binding Rossmann-like domain Apre_1080 PF02733 Dak1 domain Apre_1081 PF02734 DAK2 domain Apre_1082 PF03610 PTS system fructose IIA component Apre_1083 PF00270 DEAD/DEAH box helicase Apre_1083 PF00271 Helicase conserved C-terminal domain Apre_1083 PF03880 DbpA RNA binding domain Apre_1084 PF13417 Glutathione S-transferase, N-terminal domain Apre_1085 PF02256 Iron hydrogenase small subunit Apre_1085 PF02906 Iron only hydrogenase large subunit, C-terminal domain Apre_1085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Apre_1085 PF13187 4Fe-4S dicluster domain Apre_1085 PF13510 2Fe-2S iron-sulfur cluster binding domain Apre_1086 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Apre_1086 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Apre_1086 PF12838 4Fe-4S dicluster domain Apre_1087 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin Apre_1090 PF02687 Apre_1090 Apre_1091 PF00005 ABC transporter Apre_1092 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_1093 PF00072 Response regulator receiver domain Apre_1093 PF00486 Transcriptional regulatory protein, C terminal Apre_1094 PF13302 Acetyltransferase (GNAT) domain Apre_1095 PF04055 Radical SAM superfamily Apre_1095 PF13394 4Fe-4S single cluster domain Apre_1096 PF00440 Bacterial regulatory proteins, tetR family Apre_1097 PF03061 Thioesterase superfamily Apre_1099 PF16113 Apre_1099 Apre_1100 PF00285 Citrate synthase Apre_1101 PF00180 Isocitrate/isopropylmalate dehydrogenase Apre_1102 PF00330 Aconitase family (aconitate hydratase) Apre_1102 PF00694 Aconitase C-terminal domain Apre_1103 PF01259 SAICAR synthetase Apre_1104 PF00586 AIR synthase related protein, N-terminal domain Apre_1104 PF02769 AIR synthase related protein, C-terminal domain Apre_1105 PF00731 AIR carboxylase Apre_1106 PF00478 IMP dehydrogenase / GMP reductase domain Apre_1106 PF00571 CBS domain Apre_1107 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Apre_1107 PF02769 AIR synthase related protein, C-terminal domain Apre_1107 PF02843 Phosphoribosylglycinamide synthetase, C domain Apre_1107 PF02844 Phosphoribosylglycinamide synthetase, N domain Apre_1107 PF13507 CobB/CobQ-like glutamine amidotransferase domain Apre_1108 PF01808 AICARFT/IMPCHase bienzyme Apre_1108 PF02142 MGS-like domain Apre_1109 PF00551 Formyl transferase Apre_1110 PF13537 Glutamine amidotransferase domain Apre_1111 PF01268 Formate--tetrahydrofolate ligase Apre_1112 PF07969 Amidohydrolase family Apre_1113 PF07690 Major Facilitator Superfamily Apre_1114 PF01964 ThiC family Apre_1115 PF01048 Phosphorylase superfamily Apre_1117 PF13302 Acetyltransferase (GNAT) domain Apre_1118 PF01396 Apre_1118 Apre_1118 PF08378 Apre_1118 Apre_1119 PF07501 G5 domain Apre_1120 PF02080 TrkA-C domain Apre_1120 PF02254 TrkA-N domain Apre_1120 PF07885 Ion channel Apre_1121 PF06081 Apre_1121 Apre_1121 PF11728 DUF939 C-terminal domain Apre_1122 PF00583 Acetyltransferase (GNAT) family Apre_1123 PF02915 Rubrerythrin Apre_1124 PF14697 4Fe-4S dicluster domain Apre_1125 PF04468 Apre_1125 Apre_1126 PF13177 DNA polymerase III, delta subunit Apre_1127 PF06153 Protein of unknown function (DUF970) Apre_1128 PF02223 Thymidylate kinase Apre_1129 PF01386 Ribosomal L25p family Apre_1129 PF14693 Ribosomal protein TL5, C-terminal domain Apre_1130 PF08534 Redoxin Apre_1131 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Apre_1132 PF00877 NlpC/P60 family Apre_1133 PF01784 NIF3 (NGG1p interacting factor 3) Apre_1134 PF12847 Methyltransferase domain Apre_1135 PF00140 Sigma-70 factor, region 1 Apre_1135 PF04539 Sigma-70 region 3 Apre_1135 PF04542 Sigma-70 region 2 Apre_1135 PF04545 Sigma-70, region 4 Apre_1136 PF01807 CHC2 zinc finger Apre_1136 PF08275 DNA primase catalytic core, N-terminal domain Apre_1136 PF13155 Toprim-like Apre_1137 PF02311 AraC-like ligand binding domain Apre_1137 PF12833 Helix-turn-helix domain Apre_1138 PF03471 Transporter associated domain Apre_1139 PF13200 Apre_1139 Apre_1140 PF00009 Elongation factor Tu GTP binding domain Apre_1140 PF03143 Elongation factor Tu C-terminal domain Apre_1140 PF03144 Elongation factor Tu domain 2 Apre_1141 PF03601 Apre_1141 Apre_1142 PF04228 Apre_1142 Apre_1143 PF01475 Ferric uptake regulator family Apre_1144 PF00542 Ribosomal protein L7/L12 C-terminal domain Apre_1144 PF16320 Apre_1144 Apre_1145 PF00466 Ribosomal protein L10 Apre_1146 PF00687 Ribosomal protein L1p/L10e family Apre_1147 PF00298 Ribosomal protein L11, RNA binding domain Apre_1147 PF03946 Ribosomal protein L11, N-terminal domain Apre_1148 PF00467 KOW motif Apre_1148 PF02357 Transcription termination factor nusG Apre_1149 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Apre_1150 PF00471 Ribosomal protein L33 Apre_1152 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Apre_1152 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Apre_1152 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Apre_1152 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Apre_1153 PF00171 Aldehyde dehydrogenase family Apre_1154 PF05175 Methyltransferase small domain Apre_1155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Apre_1156 PF12900 Pyridoxamine 5'-phosphate oxidase Apre_1157 PF13419 Haloacid dehalogenase-like hydrolase Apre_1158 PF00885 6,7-dimethyl-8-ribityllumazine synthase Apre_1159 PF00925 GTP cyclohydrolase II Apre_1159 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Apre_1160 PF00677 Lumazine binding domain Apre_1161 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Apre_1161 PF01872 RibD C-terminal domain Apre_1162 PF01165 Ribosomal protein S21 Apre_1163 PF01230 HIT domain Apre_1164 PF00919 Uncharacterized protein family UPF0004 Apre_1164 PF04055 Radical SAM superfamily Apre_1165 PF00226 DnaJ domain Apre_1165 PF00684 DnaJ central domain Apre_1165 PF01556 DnaJ C terminal domain Apre_1166 PF00012 Hsp70 protein Apre_1167 PF01025 GrpE Apre_1168 PF01628 HrcA protein C terminal domain Apre_1168 PF08220 DeoR-like helix-turn-helix domain Apre_1169 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Apre_1169 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Apre_1170 PF04055 Radical SAM superfamily Apre_1170 PF06969 HemN C-terminal domain Apre_1173 PF01594 Apre_1173 Apre_1174 PF04542 Sigma-70 region 2 Apre_1176 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Apre_1176 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Apre_1177 PF04055 Radical SAM superfamily Apre_1177 PF06969 HemN C-terminal domain Apre_1178 PF13302 Acetyltransferase (GNAT) domain Apre_1179 PF02311 AraC-like ligand binding domain Apre_1181 PF03167 Uracil DNA glycosylase superfamily Apre_1182 PF00009 Elongation factor Tu GTP binding domain Apre_1182 PF00679 Elongation factor G C-terminus Apre_1182 PF03144 Elongation factor Tu domain 2 Apre_1182 PF06421 GTP-binding protein LepA C-terminus Apre_1183 PF00717 Peptidase S24-like Apre_1184 PF01649 Ribosomal protein S20 Apre_1185 PF06144 DNA polymerase III, delta subunit Apre_1186 PF00753 Metallo-beta-lactamase superfamily Apre_1186 PF03772 Apre_1186 Apre_1186 PF13567 Apre_1186 Apre_1188 PF00005 ABC transporter Apre_1189 PF00005 ABC transporter Apre_1189 PF00664 ABC transporter transmembrane region Apre_1191 PF01381 Helix-turn-helix Apre_1192 PF14898 Apre_1192 Apre_1194 PF01548 Apre_1194 Apre_1194 PF02371 Apre_1194 Apre_1195 PF13630 Apre_1195 Apre_1196 PF09335 Apre_1196 Apre_1197 PF00133 tRNA synthetases class I (I, L, M and V) Apre_1197 PF08264 Anticodon-binding domain of tRNA Apre_1197 PF09334 tRNA synthetases class I (M) Apre_1197 PF13603 Leucyl-tRNA synthetase, Domain 2 Apre_1198 PF00152 tRNA synthetases class II (D, K and N) Apre_1199 PF05496 Holliday junction DNA helicase ruvB N-terminus Apre_1199 PF12002 MgsA AAA+ ATPase C terminal Apre_1199 PF16193 Apre_1199 Apre_1200 PF03477 ATP cone domain Apre_1201 PF00091 Tubulin/FtsZ family, GTPase domain Apre_1201 PF12327 FtsZ family, C-terminal domain Apre_1202 PF08478 POTRA domain, FtsQ-type Apre_1203 PF03033 Glycosyltransferase family 28 N-terminal domain Apre_1203 PF04101 Glycosyltransferase family 28 C-terminal domain Apre_1204 PF02875 Mur ligase family, glutamate ligase domain Apre_1204 PF08245 Mur ligase middle domain Apre_1205 PF00953 Glycosyl transferase family 4 Apre_1205 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Apre_1207 PF01795 MraW methylase family Apre_1208 PF02381 MraZ protein Apre_1209 PF01790 Apre_1209 Apre_1210 PF01709 Transcriptional regulator Apre_1211 PF01205 Uncharacterized protein family UPF0029 Apre_1211 PF09186 Domain of unknown function (DUF1949) Apre_1212 PF01926 50S ribosome-binding GTPase Apre_1212 PF13167 Apre_1212 Apre_1212 PF16360 Apre_1212 Apre_1213 PF00905 Penicillin binding protein transpeptidase domain Apre_1213 PF00912 Transglycosylase Apre_1214 PF04226 Apre_1214 Apre_1215 PF00072 Response regulator receiver domain Apre_1215 PF00486 Transcriptional regulatory protein, C terminal Apre_1216 PF00512 His Kinase A (phospho-acceptor) domain Apre_1216 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_1217 PF03572 Peptidase family S41 Apre_1219 PF04471 Restriction endonuclease Apre_1220 PF00270 DEAD/DEAH box helicase Apre_1220 PF00271 Helicase conserved C-terminal domain Apre_1221 PF10923 Apre_1221 Apre_1222 PF15615 Apre_1222 Apre_1223 PF03881 Fructosamine kinase Apre_1224 PF01047 MarR family Apre_1225 PF09587 Bacterial capsule synthesis protein PGA_cap Apre_1226 PF13416 Bacterial extracellular solute-binding protein Apre_1227 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1228 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1229 PF00005 ABC transporter Apre_1229 PF08402 TOBE domain Apre_1230 PF00375 Sodium:dicarboxylate symporter family Apre_1231 PF03313 Apre_1231 Apre_1232 PF00056 lactate/malate dehydrogenase, NAD binding domain Apre_1232 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Apre_1234 PF12146 Putative lysophospholipase Apre_1235 PF01470 Pyroglutamyl peptidase Apre_1236 PF06166 Apre_1236 Apre_1237 PF06149 Apre_1237 Apre_1238 PF00581 Rhodanese-like domain Apre_1239 PF00313 'Cold-shock' DNA-binding domain Apre_1240 PF13649 Methyltransferase domain Apre_1241 PF00133 tRNA synthetases class I (I, L, M and V) Apre_1241 PF08264 Anticodon-binding domain of tRNA Apre_1241 PF10458 Valyl tRNA synthetase tRNA binding arm Apre_1242 PF03618 Apre_1242 Apre_1243 PF00391 PEP-utilising enzyme, mobile domain Apre_1243 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Apre_1243 PF02896 PEP-utilising enzyme, TIM barrel domain Apre_1244 PF00171 Aldehyde dehydrogenase family Apre_1245 PF00209 Sodium:neurotransmitter symporter family Apre_1246 PF00209 Sodium:neurotransmitter symporter family Apre_1247 PF00579 tRNA synthetases class I (W and Y) Apre_1249 PF01043 SecA preprotein cross-linking domain Apre_1249 PF07516 SecA Wing and Scaffold domain Apre_1249 PF07517 SecA DEAD-like domain Apre_1250 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Apre_1250 PF16321 Apre_1250 Apre_1251 PF00326 Prolyl oligopeptidase family Apre_1252 PF03631 Apre_1252 Apre_1253 PF01812 5-formyltetrahydrofolate cyclo-ligase family Apre_1254 PF01717 Cobalamin-independent synthase, Catalytic domain Apre_1255 PF04199 Putative cyclase Apre_1256 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Apre_1256 PF01381 Helix-turn-helix Apre_1256 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Apre_1256 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Apre_1257 PF11148 Apre_1257 Apre_1259 PF05382 Apre_1259 Apre_1259 PF08460 Bacterial SH3 domain Apre_1260 PF08281 Sigma-70, region 4 Apre_1263 PF08305 NPCBM/NEW2 domain Apre_1265 PF08867 Apre_1265 Apre_1266 PF14296 Apre_1266 Apre_1267 PF00534 Glycosyl transferases group 1 Apre_1268 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Apre_1269 PF02397 Apre_1269 Apre_1270 PF13535 ATP-grasp domain Apre_1271 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Apre_1272 PF02719 Polysaccharide biosynthesis protein Apre_1272 PF13727 CoA-binding domain Apre_1273 PF03023 Apre_1273 Apre_1274 PF03023 Apre_1274 Apre_1275 PF02916 DNA polymerase processivity factor Apre_1275 PF03816 Cell envelope-related transcriptional attenuator domain Apre_1276 PF08903 Domain of unknown function (DUF1846) Apre_1277 PF01541 GIY-YIG catalytic domain Apre_1278 PF02424 ApbE family Apre_1279 PF03682 Apre_1279 Apre_1280 PF00128 Alpha amylase, catalytic domain Apre_1280 PF02806 Alpha amylase, C-terminal all-beta domain Apre_1280 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Apre_1281 PF00485 Phosphoribulokinase / Uridine kinase family Apre_1282 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Apre_1282 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Apre_1284 PF14437 Apre_1284 Apre_1285 PF00768 D-alanyl-D-alanine carboxypeptidase Apre_1285 PF07943 Penicillin-binding protein 5, C-terminal domain Apre_1286 PF04439 Streptomycin adenylyltransferase Apre_1287 PF00293 NUDIX domain Apre_1288 PF01741 Large-conductance mechanosensitive channel, MscL Apre_1289 PF01131 DNA topoisomerase Apre_1289 PF01396 Apre_1289 Apre_1289 PF01751 Toprim domain Apre_1289 PF02150 RNA polymerases M/15 Kd subunit Apre_1290 PF02481 DNA recombination-mediator protein A Apre_1291 PF02021 Uncharacterised protein family UPF0102 Apre_1292 PF01351 Ribonuclease HII Apre_1293 PF01926 50S ribosome-binding GTPase Apre_1297 PF00005 ABC transporter Apre_1298 PF13560 Helix-turn-helix domain Apre_1299 PF01245 Ribosomal protein L19 Apre_1300 PF01746 tRNA (Guanine-1)-methyltransferase Apre_1301 PF01782 RimM N-terminal domain Apre_1301 PF05239 PRC-barrel domain Apre_1302 PF13083 KH domain Apre_1303 PF00886 Ribosomal protein S16 Apre_1304 PF00448 SRP54-type protein, GTPase domain Apre_1304 PF02881 SRP54-type protein, helical bundle domain Apre_1304 PF02978 Signal peptide binding domain Apre_1305 PF04297 Putative helix-turn-helix protein, YlxM / p13 like Apre_1306 PF13180 PDZ domain Apre_1306 PF13365 Trypsin-like peptidase domain Apre_1307 PF12698 ABC-2 family transporter protein Apre_1308 PF12698 ABC-2 family transporter protein Apre_1309 PF00005 ABC transporter Apre_1311 PF02631 RecX family Apre_1312 PF01541 GIY-YIG catalytic domain Apre_1313 PF10150 Ribonuclease E/G family Apre_1315 PF00905 Penicillin binding protein transpeptidase domain Apre_1315 PF03717 Penicillin-binding Protein dimerisation domain Apre_1316 PF04093 Apre_1316 Apre_1317 PF04085 rod shape-determining protein MreC Apre_1318 PF06723 MreB/Mbl protein Apre_1319 PF04002 RadC-like JAB domain Apre_1320 PF07456 Apre_1320 Apre_1321 PF07009 Protein of unknown function (DUF1312) Apre_1322 PF04060 Putative Fe-S cluster Apre_1322 PF13187 4Fe-4S dicluster domain Apre_1322 PF13370 4Fe-4S single cluster domain Apre_1323 PF02508 Apre_1323 Apre_1324 PF02508 Apre_1324 Apre_1325 PF04205 FMN-binding domain Apre_1326 PF03116 Apre_1326 Apre_1327 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Apre_1327 PF10531 SLBB domain Apre_1327 PF13183 4Fe-4S dicluster domain Apre_1327 PF13375 RnfC Barrel sandwich hybrid domain Apre_1328 PF01464 Transglycosylase SLT domain Apre_1329 PF01121 Dephospho-CoA kinase Apre_1330 PF00476 DNA polymerase family A Apre_1330 PF01367 5'-3' exonuclease, C-terminal SAM fold Apre_1330 PF01612 3'-5' exonuclease Apre_1330 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Apre_1332 PF00535 Glycosyl transferase family 2 Apre_1332 PF04138 Apre_1332 Apre_1333 PF07719 Tetratricopeptide repeat Apre_1333 PF13181 Tetratricopeptide repeat Apre_1335 PF00750 tRNA synthetases class I (R) Apre_1335 PF03485 Arginyl tRNA synthetase N terminal domain Apre_1335 PF05746 DALR anticodon binding domain Apre_1336 PF00488 MutS domain V Apre_1336 PF01713 Smr domain Apre_1337 PF01136 Apre_1337 Apre_1337 PF12392 Apre_1337 Apre_1338 PF05164 Cell division protein ZapA Apre_1339 PF01588 Putative tRNA binding domain Apre_1339 PF03147 Ferredoxin-fold anticodon binding domain Apre_1339 PF03483 B3/4 domain Apre_1339 PF03484 tRNA synthetase B5 domain Apre_1340 PF01409 tRNA synthetases class II core domain (F) Apre_1340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Apre_1341 PF00588 SpoU rRNA Methylase family Apre_1342 PF00453 Ribosomal protein L20 Apre_1343 PF01632 Ribosomal protein L35 Apre_1344 PF00707 Translation initiation factor IF-3, C-terminal domain Apre_1344 PF05198 Translation initiation factor IF-3, N-terminal domain Apre_1345 PF01047 MarR family Apre_1346 PF02645 Uncharacterised protein, DegV family COG1307 Apre_1348 PF04073 Aminoacyl-tRNA editing domain Apre_1350 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain Apre_1350 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain Apre_1351 PF00108 Thiolase, N-terminal domain Apre_1351 PF02803 Thiolase, C-terminal domain Apre_1352 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Apre_1352 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Apre_1353 PF00378 Enoyl-CoA hydratase/isomerase family Apre_1354 PF00766 Electron transfer flavoprotein FAD-binding domain Apre_1354 PF01012 Electron transfer flavoprotein domain Apre_1355 PF01012 Electron transfer flavoprotein domain Apre_1356 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Apre_1356 PF02770 Acyl-CoA dehydrogenase, middle domain Apre_1356 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Apre_1357 PF01565 FAD binding domain Apre_1357 PF02913 FAD linked oxidases, C-terminal domain Apre_1358 PF03788 Apre_1358 Apre_1359 PF04172 Apre_1359 Apre_1360 PF01548 Apre_1360 Apre_1360 PF02371 Apre_1360 Apre_1361 PF13411 MerR HTH family regulatory protein Apre_1362 PF01880 Desulfoferrodoxin Apre_1363 PF03129 Anticodon binding domain Apre_1363 PF13393 Histidyl-tRNA synthetase Apre_1365 PF00005 ABC transporter Apre_1365 PF00664 ABC transporter transmembrane region Apre_1366 PF00005 ABC transporter Apre_1366 PF00664 ABC transporter transmembrane region Apre_1367 PF13463 Winged helix DNA-binding domain Apre_1368 PF07728 AAA domain (dynein-related subfamily) Apre_1370 PF03023 Apre_1370 Apre_1371 PF02906 Iron only hydrogenase large subunit, C-terminal domain Apre_1371 PF12838 4Fe-4S dicluster domain Apre_1373 PF00512 His Kinase A (phospho-acceptor) domain Apre_1373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_1374 PF00072 Response regulator receiver domain Apre_1374 PF00486 Transcriptional regulatory protein, C terminal Apre_1375 PF01895 PhoU domain Apre_1376 PF00005 ABC transporter Apre_1377 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1378 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1379 PF12849 PBP superfamily domain Apre_1380 PF00294 pfkB family carbohydrate kinase Apre_1381 PF06808 Apre_1381 Apre_1382 PF04290 Apre_1382 Apre_1383 PF03480 Bacterial extracellular solute-binding protein, family 7 Apre_1384 PF00356 Bacterial regulatory proteins, lacI family Apre_1384 PF13377 Periplasmic binding protein-like domain Apre_1385 PF00633 Helix-hairpin-helix motif Apre_1385 PF00730 HhH-GPD superfamily base excision DNA repair protein Apre_1385 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain Apre_1386 PF04203 Sortase family Apre_1387 PF13417 Glutathione S-transferase, N-terminal domain Apre_1388 PF08282 haloacid dehalogenase-like hydrolase Apre_1390 PF01263 Aldose 1-epimerase Apre_1391 PF00210 Ferritin-like domain Apre_1393 PF02677 Apre_1393 Apre_1394 PF00380 Ribosomal protein S9/S16 Apre_1395 PF00572 Ribosomal protein L13 Apre_1396 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Apre_1397 PF08543 Phosphomethylpyrimidine kinase Apre_1398 PF02386 Cation transport protein Apre_1399 PF02080 TrkA-C domain Apre_1399 PF02254 TrkA-N domain Apre_1400 PF03553 Apre_1400 Apre_1402 PF00857 Isochorismatase family Apre_1403 PF04055 Radical SAM superfamily Apre_1403 PF16199 Apre_1403 Apre_1404 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Apre_1404 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Apre_1405 PF08282 haloacid dehalogenase-like hydrolase Apre_1406 PF00005 ABC transporter Apre_1407 PF00271 Helicase conserved C-terminal domain Apre_1407 PF02151 UvrB/uvrC motif Apre_1407 PF04851 Type III restriction enzyme, res subunit Apre_1407 PF12344 Ultra-violet resistance protein B Apre_1408 PF01022 Bacterial regulatory protein, arsR family Apre_1409 PF00403 Heavy-metal-associated domain Apre_1410 PF00122 E1-E2 ATPase Apre_1410 PF00702 haloacid dehalogenase-like hydrolase Apre_1411 PF07554 Uncharacterised Sugar-binding Domain Apre_1411 PF08428 Apre_1411 Apre_1411 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) Apre_1412 PF05525 Apre_1412 Apre_1413 PF00270 DEAD/DEAH box helicase Apre_1413 PF00271 Helicase conserved C-terminal domain Apre_1413 PF00570 HRDC domain Apre_1413 PF09382 RQC domain Apre_1413 PF16124 Apre_1413 Apre_1414 PF13349 Apre_1414 Apre_1416 PF01416 tRNA pseudouridine synthase Apre_1417 PF02361 Cobalt transport protein Apre_1418 PF00005 ABC transporter Apre_1419 PF00005 ABC transporter Apre_1420 PF03734 L,D-transpeptidase catalytic domain Apre_1420 PF12229 Putative peptidoglycan binding domain Apre_1421 PF01170 Putative RNA methylase family UPF0020 Apre_1422 PF00111 2Fe-2S iron-sulfur cluster binding domain Apre_1422 PF01799 [2Fe-2S] binding domain Apre_1423 PF00941 FAD binding domain in molybdopterin dehydrogenase Apre_1423 PF03450 CO dehydrogenase flavoprotein C-terminal domain Apre_1424 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Apre_1424 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Apre_1425 PF00860 Permease family Apre_1426 PF00860 Permease family Apre_1427 PF01979 Amidohydrolase family Apre_1428 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_1428 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Apre_1429 PF00696 Amino acid kinase family Apre_1430 PF01979 Amidohydrolase family Apre_1431 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Apre_1432 PF01546 Peptidase family M20/M25/M40 Apre_1432 PF07687 Peptidase dimerisation domain Apre_1433 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Apre_1433 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Apre_1434 PF00291 Pyridoxal-phosphate dependent enzyme Apre_1435 PF00392 Bacterial regulatory proteins, gntR family Apre_1435 PF07729 FCD domain Apre_1436 PF00994 Probable molybdopterin binding domain Apre_1437 PF00994 Probable molybdopterin binding domain Apre_1439 PF01967 MoaC family Apre_1440 PF04055 Radical SAM superfamily Apre_1440 PF06463 Molybdenum Cofactor Synthesis C Apre_1440 PF13353 4Fe-4S single cluster domain Apre_1441 PF00005 ABC transporter Apre_1442 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1443 PF13531 Bacterial extracellular solute-binding protein Apre_1444 PF03590 Aspartate-ammonia ligase Apre_1445 PF05857 Apre_1445 Apre_1447 PF12686 Apre_1447 Apre_1453 PF00746 Apre_1453 Apre_1453 PF16555 Apre_1453 Apre_1453 PF16569 Apre_1453 Apre_1453 PF16570 Apre_1453 Apre_1455 PF12672 Apre_1455 Apre_1456 PF00258 Flavodoxin Apre_1458 PF02421 Ferrous iron transport protein B Apre_1458 PF07664 Apre_1458 Apre_1458 PF07670 Nucleoside recognition Apre_1459 PF04023 FeoA domain Apre_1460 PF04023 FeoA domain Apre_1463 PF01594 Apre_1463 Apre_1464 PF03780 Apre_1464 Apre_1465 PF10031 Apre_1465 Apre_1467 PF00005 ABC transporter Apre_1467 PF12848 ABC transporter Apre_1468 PF02629 CoA binding domain Apre_1468 PF06971 Putative DNA-binding protein N-terminus Apre_1470 PF00009 Elongation factor Tu GTP binding domain Apre_1470 PF00679 Elongation factor G C-terminus Apre_1470 PF03144 Elongation factor Tu domain 2 Apre_1470 PF14492 Elongation Factor G, domain II Apre_1471 PF13581 Histidine kinase-like ATPase domain Apre_1472 PF00301 Rubredoxin Apre_1473 PF00301 Rubredoxin Apre_1475 PF02588 Apre_1475 Apre_1475 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Apre_1476 PF01996 F420-0:Gamma-glutamyl ligase Apre_1478 PF02146 Sir2 family Apre_1480 PF00005 ABC transporter Apre_1482 PF01337 Barstar (barnase inhibitor) Apre_1483 PF00545 ribonuclease Apre_1484 PF04203 Sortase family Apre_1485 PF04203 Sortase family Apre_1486 PF04203 Sortase family Apre_1488 PF07892 Protein of unknown function (DUF1667) Apre_1489 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_1490 PF01266 FAD dependent oxidoreductase Apre_1490 PF04324 BFD-like [2Fe-2S] binding domain Apre_1491 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Apre_1491 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Apre_1492 PF04309 Glycerol-3-phosphate responsive antiterminator Apre_1493 PF02397 Apre_1493 Apre_1494 PF00849 RNA pseudouridylate synthase Apre_1494 PF01479 S4 domain Apre_1495 PF03551 Transcriptional regulator PadR-like family Apre_1496 PF00580 UvrD/REP helicase N-terminal domain Apre_1496 PF12705 PD-(D/E)XK nuclease superfamily Apre_1496 PF13361 UvrD-like helicase C-terminal domain Apre_1498 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_1500 PF00118 TCP-1/cpn60 chaperonin family Apre_1501 PF00166 Chaperonin 10 Kd subunit Apre_1502 PF00155 Aminotransferase class I and II Apre_1503 PF01641 SelR domain Apre_1504 PF01113 Dihydrodipicolinate reductase, N-terminus Apre_1505 PF03486 HI0933-like protein Apre_1506 PF01225 Mur ligase family, catalytic domain Apre_1506 PF02875 Mur ligase family, glutamate ligase domain Apre_1506 PF08245 Mur ligase middle domain Apre_1508 PF00462 Glutaredoxin Apre_1509 PF00398 Ribosomal RNA adenine dimethylase Apre_1510 PF01751 Toprim domain Apre_1510 PF13331 Apre_1510 Apre_1511 PF01026 TatD related DNase Apre_1512 PF01406 tRNA synthetases class I (C) catalytic domain Apre_1512 PF01588 Putative tRNA binding domain Apre_1512 PF08264 Anticodon-binding domain of tRNA Apre_1512 PF09334 tRNA synthetases class I (M) Apre_1513 PF01235 Apre_1513 Apre_1514 PF00579 tRNA synthetases class I (W and Y) Apre_1514 PF01479 S4 domain Apre_1515 PF00132 Bacterial transferase hexapeptide (six repeats) Apre_1515 PF12464 Maltose acetyltransferase Apre_1516 PF01022 Bacterial regulatory protein, arsR family Apre_1517 PF00005 ABC transporter Apre_1518 PF00005 ABC transporter Apre_1519 PF00072 Response regulator receiver domain Apre_1519 PF00196 Bacterial regulatory proteins, luxR family Apre_1523 PF00005 ABC transporter Apre_1524 PF06207 Apre_1524 Apre_1525 PF10609 ParA/MinD ATPase like Apre_1526 PF13303 Apre_1526 Apre_1531 PF02829 3H domain Apre_1531 PF08279 HTH domain Apre_1532 PF00497 Bacterial extracellular solute-binding proteins, family 3 Apre_1532 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1533 PF00005 ABC transporter Apre_1535 PF00999 Sodium/hydrogen exchanger family Apre_1536 PF00075 RNase H Apre_1536 PF01693 Caulimovirus viroplasmin Apre_1537 PF00128 Alpha amylase, catalytic domain Apre_1538 PF01791 DeoC/LacD family aldolase Apre_1539 PF07228 Stage II sporulation protein E (SpoIIE) Apre_1540 PF00367 phosphotransferase system, EIIB Apre_1540 PF02378 Phosphotransferase system, EIIC Apre_1541 PF13580 SIS domain Apre_1542 PF05913 Bacterial protein of unknown function (DUF871) Apre_1543 PF00144 Beta-lactamase Apre_1544 PF01380 SIS domain Apre_1544 PF01418 Helix-turn-helix domain, rpiR family Apre_1545 PF13419 Haloacid dehalogenase-like hydrolase Apre_1546 PF01196 Ribosomal protein L17 Apre_1547 PF01000 RNA polymerase Rpb3/RpoA insert domain Apre_1547 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Apre_1547 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Apre_1548 PF00163 Ribosomal protein S4/S9 N-terminal domain Apre_1548 PF01479 S4 domain Apre_1549 PF00411 Ribosomal protein S11 Apre_1550 PF00416 Ribosomal protein S13/S18 Apre_1551 PF00444 Ribosomal protein L36 Apre_1552 PF01176 Translation initiation factor 1A / IF-1 Apre_1553 PF00406 Adenylate kinase Apre_1553 PF05191 Adenylate kinase, active site lid Apre_1554 PF00344 SecY translocase Apre_1555 PF00828 Ribosomal protein L18e/L15 Apre_1556 PF00327 Ribosomal protein L30p/L7e Apre_1557 PF00333 Ribosomal protein S5, N-terminal domain Apre_1557 PF03719 Ribosomal protein S5, C-terminal domain Apre_1558 PF00861 Ribosomal L18p/L5e family Apre_1559 PF00347 Ribosomal protein L6 Apre_1560 PF00410 Ribosomal protein S8 Apre_1561 PF00253 Ribosomal protein S14p/S29e Apre_1562 PF00281 Ribosomal protein L5 Apre_1562 PF00673 ribosomal L5P family C-terminus Apre_1563 PF00467 KOW motif Apre_1563 PF17136 Apre_1563 Apre_1564 PF00238 Ribosomal protein L14p/L23e Apre_1565 PF00366 Ribosomal protein S17 Apre_1566 PF00831 Ribosomal L29 protein Apre_1567 PF00252 Ribosomal protein L16p/L10e Apre_1568 PF00189 Ribosomal protein S3, C-terminal domain Apre_1568 PF07650 KH domain Apre_1569 PF00237 Ribosomal protein L22p/L17e Apre_1570 PF00203 Ribosomal protein S19 Apre_1571 PF00181 Ribosomal Proteins L2, RNA binding domain Apre_1571 PF03947 Ribosomal Proteins L2, C-terminal domain Apre_1572 PF00276 Ribosomal protein L23 Apre_1573 PF00573 Ribosomal protein L4/L1 family Apre_1574 PF00297 Ribosomal protein L3 Apre_1575 PF00338 Ribosomal protein S10p/S20e Apre_1576 PF03976 Polyphosphate kinase 2 (PPK2) Apre_1577 PF06541 Apre_1577 Apre_1578 PF03553 Apre_1578 Apre_1579 PF07501 G5 domain Apre_1579 PF10425 C-terminus of bacterial fibrinogen-binding adhesin Apre_1580 PF00027 Cyclic nucleotide-binding domain Apre_1580 PF13545 Crp-like helix-turn-helix domain Apre_1581 PF07690 Major Facilitator Superfamily Apre_1582 PF07859 alpha/beta hydrolase fold Apre_1583 PF02378 Phosphotransferase system, EIIC Apre_1584 PF00232 Glycosyl hydrolase family 1 Apre_1585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Apre_1586 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Apre_1587 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Apre_1587 PF00874 PRD domain Apre_1587 PF05043 Mga helix-turn-helix domain Apre_1587 PF08279 HTH domain Apre_1588 PF00365 Phosphofructokinase Apre_1589 PF05525 Apre_1589 Apre_1590 PF03812 Apre_1590 Apre_1591 PF00933 Glycosyl hydrolase family 3 N terminal domain Apre_1591 PF01915 Glycosyl hydrolase family 3 C-terminal domain Apre_1592 PF13347 MFS/sugar transport protein Apre_1593 PF13347 MFS/sugar transport protein Apre_1594 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Apre_1594 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Apre_1595 PF01261 Xylose isomerase-like TIM barrel Apre_1596 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Apre_1596 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Apre_1597 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Apre_1597 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Apre_1598 PF00294 pfkB family carbohydrate kinase Apre_1599 PF01081 KDPG and KHG aldolase Apre_1600 PF02614 Glucuronate isomerase Apre_1601 PF03786 D-mannonate dehydratase (UxuA) Apre_1602 PF01232 Mannitol dehydrogenase Rossmann domain Apre_1602 PF08125 Mannitol dehydrogenase C-terminal domain Apre_1603 PF00128 Alpha amylase, catalytic domain Apre_1605 PF09861 Domain of unknown function (DUF2088) Apre_1606 PF02417 Apre_1606 Apre_1607 PF02417 Apre_1607 Apre_1608 PF00703 Glycosyl hydrolases family 2 Apre_1608 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Apre_1608 PF02837 Glycosyl hydrolases family 2, sugar binding domain Apre_1608 PF16355 Apre_1608 Apre_1609 PF07971 Glycosyl hydrolase family 92 Apre_1610 PF13320 Apre_1610 Apre_1611 PF06808 Apre_1611 Apre_1612 PF04290 Apre_1612 Apre_1613 PF03480 Bacterial extracellular solute-binding protein, family 7 Apre_1614 PF00107 Zinc-binding dehydrogenase Apre_1614 PF08240 Alcohol dehydrogenase GroES-like domain Apre_1615 PF00392 Bacterial regulatory proteins, gntR family Apre_1615 PF07729 FCD domain Apre_1616 PF00456 Transketolase, thiamine diphosphate binding domain Apre_1616 PF02779 Transketolase, pyrimidine binding domain Apre_1616 PF02780 Transketolase, C-terminal domain Apre_1617 PF00923 Transaldolase Apre_1618 PF13407 Periplasmic binding protein domain Apre_1619 PF02653 Apre_1619 Apre_1620 PF00005 ABC transporter Apre_1621 PF05025 RbsD / FucU transport protein family Apre_1622 PF00294 pfkB family carbohydrate kinase Apre_1623 PF00356 Bacterial regulatory proteins, lacI family Apre_1623 PF13377 Periplasmic binding protein-like domain Apre_1624 PF00155 Aminotransferase class I and II Apre_1625 PF01869 BadF/BadG/BcrA/BcrD ATPase family Apre_1626 PF00186 Dihydrofolate reductase Apre_1628 PF02581 Thiamine monophosphate synthase/TENI Apre_1629 PF02110 Hydroxyethylthiazole kinase family Apre_1630 PF09512 Apre_1630 Apre_1631 PF04055 Radical SAM superfamily Apre_1631 PF06968 Biotin and Thiamin Synthesis associated domain Apre_1632 PF05690 Thiazole biosynthesis protein ThiG Apre_1633 PF00899 ThiF family Apre_1634 PF02597 ThiS family Apre_1636 PF01592 NifU-like N terminal domain Apre_1637 PF00266 Aminotransferase class-V Apre_1638 PF01458 Uncharacterized protein family (UPF0051) Apre_1639 PF01458 Uncharacterized protein family (UPF0051) Apre_1640 PF00005 ABC transporter Apre_1641 PF00381 PTS HPr component phosphorylation site Apre_1642 PF04542 Sigma-70 region 2 Apre_1642 PF04545 Sigma-70, region 4 Apre_1643 PF05991 Apre_1643 Apre_1644 PF00588 SpoU rRNA Methylase family Apre_1644 PF08032 RNA 2'-O ribose methyltransferase substrate binding Apre_1645 PF01406 tRNA synthetases class I (C) catalytic domain Apre_1645 PF09190 DALR domain Apre_1646 PF00749 tRNA synthetases class I (E and Q), catalytic domain Apre_1647 PF01226 Formate/nitrite transporter Apre_1648 PF01432 Peptidase family M3 Apre_1648 PF08439 Oligopeptidase F Apre_1649 PF02073 Thermophilic metalloprotease (M29) Apre_1650 PF04397 LytTr DNA-binding domain Apre_1651 PF11457 Apre_1651 Apre_1653 PF17225 Apre_1653 Apre_1654 PF11368 Apre_1654 Apre_1655 PF01381 Helix-turn-helix Apre_1656 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Apre_1657 PF02915 Rubrerythrin Apre_1658 PF00342 Phosphoglucose isomerase Apre_1659 PF02517 CAAX protease self-immunity Apre_1662 PF01554 MatE Apre_1664 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Apre_1664 PF02824 TGS domain Apre_1664 PF03129 Anticodon binding domain Apre_1664 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Apre_1665 PF03610 PTS system fructose IIA component Apre_1667 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1668 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1669 PF09508 Lacto-N-biose phosphorylase Apre_1669 PF17385 Apre_1669 Apre_1669 PF17386 Apre_1669 Apre_1671 PF00005 ABC transporter Apre_1671 PF08402 TOBE domain Apre_1672 PF16363 Apre_1672 Apre_1673 PF00483 Nucleotidyl transferase Apre_1674 PF12905 Endo-alpha-N-acetylgalactosaminidase Apre_1674 PF17451 Apre_1674 Apre_1674 PF17573 Apre_1674 Apre_1675 PF03830 PTS system sorbose subfamily IIB component Apre_1676 PF00581 Rhodanese-like domain Apre_1676 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Apre_1676 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_1677 PF03358 NADPH-dependent FMN reductase Apre_1678 PF02678 Pirin Apre_1678 PF05726 Pirin C-terminal cupin domain Apre_1679 PF01047 MarR family Apre_1680 PF05402 Coenzyme PQQ synthesis protein D (PqqD) Apre_1681 PF03169 Apre_1681 Apre_1682 PF01595 Apre_1682 Apre_1682 PF03471 Transporter associated domain Apre_1683 PF03553 Apre_1683 Apre_1684 PF01813 ATP synthase subunit D Apre_1685 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Apre_1685 PF02874 ATP synthase alpha/beta family, beta-barrel domain Apre_1686 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Apre_1686 PF02874 ATP synthase alpha/beta family, beta-barrel domain Apre_1686 PF16886 Apre_1686 Apre_1687 PF01990 ATP synthase (F/14-kDa) subunit Apre_1688 PF01992 ATP synthase (C/AC39) subunit Apre_1689 PF01991 ATP synthase (E/31 kDa) subunit Apre_1690 PF00137 ATP synthase subunit C Apre_1691 PF01496 V-type ATPase 116kDa subunit family Apre_1694 PF00534 Glycosyl transferases group 1 Apre_1694 PF13439 Glycosyltransferase Family 4 Apre_1695 PF01235 Apre_1695 Apre_1696 PF00268 Ribonucleotide reductase, small chain Apre_1697 PF04020 Apre_1697 Apre_1700 PF00317 Ribonucleotide reductase, all-alpha domain Apre_1700 PF02867 Ribonucleotide reductase, barrel domain Apre_1700 PF03477 ATP cone domain Apre_1701 PF06271 Apre_1701 Apre_1702 PF01343 Peptidase family S49 Apre_1703 PF12953 Apre_1703 Apre_1704 PF02540 NAD synthase Apre_1705 PF00731 AIR carboxylase Apre_1706 PF01969 Protein of unknown function DUF111 Apre_1707 PF01969 Protein of unknown function DUF111 Apre_1708 PF01497 Periplasmic binding protein Apre_1709 PF01032 FecCD transport family Apre_1710 PF00005 ABC transporter Apre_1713 PF12146 Putative lysophospholipase Apre_1717 PF00004 ATPase family associated with various cellular activities (AAA) Apre_1717 PF01434 Peptidase family M41 Apre_1717 PF06480 FtsH Extracellular Apre_1718 PF01047 MarR family Apre_1719 PF13673 Acetyltransferase (GNAT) domain Apre_1720 PF07992 Pyridine nucleotide-disulphide oxidoreductase Apre_1721 PF00085 Thioredoxin Apre_1723 PF07556 Apre_1723 Apre_1724 PF01515 Phosphate acetyl/butaryl transferase Apre_1725 PF14584 Apre_1725 Apre_1726 PF04961 Formiminotransferase-cyclodeaminase Apre_1727 PF02195 ParB-like nuclease domain Apre_1728 PF13614 AAA domain Apre_1729 PF00994 Probable molybdopterin binding domain Apre_1729 PF02464 Competence-damaged protein Apre_1730 PF02517 CAAX protease self-immunity Apre_1731 PF02527 rRNA small subunit methyltransferase G Apre_1732 PF01134 Glucose inhibited division protein A Apre_1732 PF13932 GidA associated domain 3 Apre_1733 PF01926 50S ribosome-binding GTPase Apre_1733 PF10396 GTP-binding protein TrmE N-terminus Apre_1733 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE Apre_1734 PF01895 PhoU domain Apre_1734 PF02690 Apre_1734 Apre_1735 PF01424 R3H domain Apre_1735 PF13083 KH domain Apre_1735 PF14804 Jag N-terminus Apre_1736 PF02096 60Kd inner membrane protein Apre_1737 PF01809 Apre_1737 Apre_1738 PF00825 Ribonuclease P Apre_1739 PF00468 Ribosomal protein L34 Apre_1741 PF04055 Radical SAM superfamily Apre_1741 PF13353 4Fe-4S single cluster domain Apre_1743 PF00005 ABC transporter Apre_1743 PF00664 ABC transporter transmembrane region Apre_1744 PF00069 Protein kinase domain Apre_1744 PF05147 Lanthionine synthetase C-like protein Apre_1745 PF00005 ABC transporter Apre_1745 PF00664 ABC transporter transmembrane region Apre_1754 PF04055 Radical SAM superfamily Apre_1754 PF13353 4Fe-4S single cluster domain Apre_1755 PF00005 ABC transporter Apre_1756 PF02687 Apre_1756 Apre_1757 PF00005 ABC transporter Apre_1757 PF00664 ABC transporter transmembrane region Apre_1758 PF03432 Apre_1758 Apre_1759 PF05713 Apre_1759 Apre_1760 PF01325 Iron dependent repressor, N-terminal DNA binding domain Apre_1760 PF02742 Iron dependent repressor, metal binding and dimerisation domain Apre_1761 PF00975 Thioesterase domain Apre_1762 PF01648 4'-phosphopantetheinyl transferase superfamily Apre_1763 PF00501 AMP-binding enzyme Apre_1763 PF13193 AMP-binding enzyme C-terminal domain Apre_1764 PF00501 AMP-binding enzyme Apre_1764 PF00550 Phosphopantetheine attachment site Apre_1764 PF00668 Condensation domain Apre_1765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Apre_1765 PF13847 Methyltransferase domain Apre_1766 PF00668 Condensation domain Apre_1767 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1768 PF00528 Binding-protein-dependent transport system inner membrane component Apre_1769 PF00005 ABC transporter Apre_1770 PF00005 ABC transporter Apre_1771 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Apre_1772 PF06821 Serine hydrolase Apre_1773 PF00005 ABC transporter Apre_1773 PF00664 ABC transporter transmembrane region Apre_1774 PF00005 ABC transporter Apre_1774 PF00664 ABC transporter transmembrane region Apre_1776 PF00239 Resolvase, N terminal domain Apre_1776 PF07508 Recombinase Apre_1776 PF13408 Recombinase zinc beta ribbon domain Apre_1780 PF04324 BFD-like [2Fe-2S] binding domain Apre_1783 PF08241 Methyltransferase domain Apre_1787 PF12958 Apre_1787 Apre_1788 PF03389 MobA/MobL family Apre_1790 PF06445 GyrI-like small molecule binding domain Apre_1790 PF12833 Helix-turn-helix domain Apre_1792 PF12687 Apre_1792 Apre_1793 PF09681 Apre_1793 Apre_1795 PF00239 Resolvase, N terminal domain Apre_1795 PF07508 Recombinase Apre_1795 PF13408 Recombinase zinc beta ribbon domain Apre_1797 PF13338 Apre_1797 Apre_1798 PF12833 Helix-turn-helix domain Apre_1799 PF01381 Helix-turn-helix Apre_1800 PF02384 N-6 DNA Methylase Apre_1801 PF06970 Replication initiator protein A (RepA) N-terminus Apre_1802 PF01695 IstB-like ATP binding protein Apre_1803 PF12687 Apre_1803 Apre_1804 PF02498 Apre_1804 Apre_1804 PF03374 Apre_1804 Apre_1805 PF02534 Type IV secretory system Conjugative DNA transfer Apre_1811 PF12750 Apre_1811 Apre_1814 PF12666 Apre_1814 Apre_1815 PF12846 AAA-like domain Apre_1816 PF00877 NlpC/P60 family Apre_1818 PF07833 Copper amine oxidase N-terminal domain Apre_1819 PF14283 Apre_1819 Apre_1821 PF08843 Nucleotidyl transferase of unknown function (DUF1814) Apre_1822 PF01131 DNA topoisomerase Apre_1822 PF01751 Toprim domain Apre_1823 PF00145 C-5 cytosine-specific DNA methylase Apre_1824 PF00271 Helicase conserved C-terminal domain Apre_1824 PF04851 Type III restriction enzyme, res subunit Apre_1825 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) Apre_1825 PF08388 Apre_1825 Apre_1825 PF13655 Apre_1825 Apre_1829 PF11188 Apre_1829 Apre_1830 PF13443 Cro/C1-type HTH DNA-binding domain Apre_1831 PF04221 RelB antitoxin Apre_1833 PF00072 Response regulator receiver domain Apre_1833 PF00486 Transcriptional regulatory protein, C terminal Apre_1834 PF00512 His Kinase A (phospho-acceptor) domain Apre_1834 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Apre_1835 PF00005 ABC transporter Apre_1837 PF04055 Radical SAM superfamily Apre_1837 PF13353 4Fe-4S single cluster domain Apre_1839 PF12698 ABC-2 family transporter protein Apre_1840 PF00005 ABC transporter Apre_1840 PF00664 ABC transporter transmembrane region Apre_1841 PF04892 Apre_1841 Apre_1844 PF04055 Radical SAM superfamily Apre_1845 PF00005 ABC transporter Apre_1849 PF00072 Response regulator receiver domain Apre_1849 PF00196 Bacterial regulatory proteins, luxR family Apre_1852 PF00072 Response regulator receiver domain Apre_1852 PF00196 Bacterial regulatory proteins, luxR family