locus-tag	class	description
bsdcttw_00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
bsdcttw_00040	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
bsdcttw_00050	COG0187	DNA topoisomerase II activity
bsdcttw_00060	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
bsdcttw_00090	COG1902	pentaerythritol trinitrate reductase activity
bsdcttw_00100	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
bsdcttw_00110	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
bsdcttw_00120	COG0745	RESPONSE REGULATOR receiver
bsdcttw_00170	COG5002	protein histidine kinase activity
bsdcttw_00200	COG1132	(ABC) transporter
bsdcttw_00210	COG1132	(ABC) transporter
bsdcttw_00230	COG1511	domain protein
bsdcttw_00240	COG2357	RelA SpoT domain protein
bsdcttw_00250	COG0539	negative regulation of cytoplasmic translation
bsdcttw_00300	COG1362	aminopeptidase activity
bsdcttw_00340	COG1609	Transcriptional regulator
bsdcttw_00360	COG0058	SHG alpha-glucan phosphorylase activity
bsdcttw_00380	COG1175	transmembrane transport
bsdcttw_00390	COG3833	ABC-type maltose transport systems, permease component
bsdcttw_00560	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
bsdcttw_00570	COG0705	Rhomboid family
bsdcttw_00570	COG0457	Tetratricopeptide repeat
bsdcttw_00590	COG3852	Histidine kinase
bsdcttw_00600	COG0537	adenosine 5'-monophosphoramidase activity
bsdcttw_00610	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
bsdcttw_00630	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
bsdcttw_00650	COG0166	Belongs to the GPI family
bsdcttw_00690	COG1827	regulation of RNA biosynthetic process
bsdcttw_00700	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
bsdcttw_00710	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
bsdcttw_00730	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
bsdcttw_00750	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
bsdcttw_00760	COG0842	Transport permease protein
bsdcttw_00770	COG1131	(ABC) transporter
bsdcttw_00780	COG1309	transcriptional regulator
bsdcttw_00810	COG2770	Histidine kinase
bsdcttw_00810	COG2205	protein histidine kinase activity
bsdcttw_00820	COG0745	RESPONSE REGULATOR receiver
bsdcttw_00900	COG0800	Aldolase
bsdcttw_00910	COG1396	sequence-specific DNA binding
bsdcttw_00960	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
bsdcttw_01000	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_01000	COG2207	Transcriptional regulator
bsdcttw_01050	COG1454	alcohol dehydrogenase
bsdcttw_01060	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
bsdcttw_01070	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
bsdcttw_01090	COG4209	transmembrane transport
bsdcttw_01100	COG0395	ABC-type sugar transport system, permease component
bsdcttw_01170	COG1609	Transcriptional regulator
bsdcttw_01180	COG4209	transmembrane transport
bsdcttw_01190	COG0395	ABC-type sugar transport system, permease component
bsdcttw_01210	COG1940	carbohydrate kinase activity
bsdcttw_01280	COG1979	alcohol dehydrogenase
bsdcttw_01310	COG0288	reversible hydration of carbon dioxide
bsdcttw_01350	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
bsdcttw_01360	COG1690	Belongs to the RtcB family
bsdcttw_01380	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_01390	COG0583	DNA-binding transcription factor activity
bsdcttw_01400	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
bsdcttw_01410	COG1360	Flagellar Motor Protein
bsdcttw_01420	COG1070	Carbohydrate kinase
bsdcttw_01440	COG0235	Class ii aldolase
bsdcttw_01450	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
bsdcttw_01460	COG2207	Transcriptional regulator
bsdcttw_01470	COG0443	Heat shock 70 kDa protein
bsdcttw_01490	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
bsdcttw_01530	COG1733	regulation of RNA biosynthetic process
bsdcttw_01540	COG2207	Transcriptional regulator
bsdcttw_01550	COG2972	Histidine kinase
bsdcttw_01610	COG2207	Transcriptional regulator
bsdcttw_01620	COG1653	transport
bsdcttw_01630	COG4209	transmembrane transport
bsdcttw_01640	COG0395	ABC-type sugar transport system, permease component
bsdcttw_01720	COG3620	sequence-specific DNA binding
bsdcttw_01730	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_01730	COG4977	sequence-specific DNA binding
bsdcttw_01930	COG0789	Transcriptional regulator
bsdcttw_01940	COG0477	Major facilitator Superfamily
bsdcttw_02040	COG1105	Belongs to the carbohydrate kinase PfkB family
bsdcttw_02050	COG2222	sugar isomerase
bsdcttw_02060	COG1288	antiporter activity
bsdcttw_02070	COG1082	Xylose isomerase domain protein TIM barrel
bsdcttw_02080	COG1228	amidohydrolase
bsdcttw_02090	COG2188	Transcriptional regulator
bsdcttw_02110	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
bsdcttw_02160	COG0708	Exodeoxyribonuclease III
bsdcttw_02180	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
bsdcttw_02190	COG1363	Peptidase, m42
bsdcttw_02210	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
bsdcttw_02230	COG0745	RESPONSE REGULATOR receiver
bsdcttw_02260	COG2205	protein histidine kinase activity
bsdcttw_02290	COG0513	Belongs to the DEAD box helicase family
bsdcttw_02300	COG2942	2-epimerase
bsdcttw_02310	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
bsdcttw_02330	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
bsdcttw_02340	COG3576	pyridoxamine 5-phosphate
bsdcttw_02360	COG1592	Rubrerythrin
bsdcttw_02360	COG1773	rubredoxin
bsdcttw_02370	COG0735	belongs to the Fur family
bsdcttw_02390	COG4481	Protein conserved in bacteria
bsdcttw_02400	COG1940	carbohydrate kinase activity
bsdcttw_02460	COG0360	Binds together with S18 to 16S ribosomal RNA
bsdcttw_02470	COG0629	single-stranded DNA binding
bsdcttw_02480	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
bsdcttw_02540	COG3142	Participates in the control of copper homeostasis
bsdcttw_02570	COG4209	transmembrane transport
bsdcttw_02580	COG0395	ABC-type sugar transport system, permease component
bsdcttw_02590	COG1653	transport
bsdcttw_02620	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
bsdcttw_02640	COG0561	phosphatase activity
bsdcttw_02650	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
bsdcttw_02670	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
bsdcttw_02680	COG0573	inorganic phosphate transmembrane transporter activity
bsdcttw_02690	COG0581	inorganic phosphate transmembrane transporter activity
bsdcttw_02700	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
bsdcttw_02740	COG1132	(ABC) transporter
bsdcttw_02760	COG0028	Belongs to the TPP enzyme family
bsdcttw_02770	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_02800	COG0450	alkyl hydroperoxide reductase
bsdcttw_02870	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_02930	COG2814	Major facilitator Superfamily
bsdcttw_02950	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
bsdcttw_02960	COG0359	binds to the 23S rRNA
bsdcttw_02970	COG0305	Participates in initiation and elongation during chromosome replication
bsdcttw_02980	COG0789	Transcriptional regulator
bsdcttw_03020	COG0515	serine threonine protein kinase
bsdcttw_03050	COG0860	N-Acetylmuramoyl-L-alanine amidase
bsdcttw_03060	COG0009	L-threonylcarbamoyladenylate synthase
bsdcttw_03070	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
bsdcttw_03080	COG0698	ribose 5-phosphate isomerase
bsdcttw_03140	COG1216	Glycosyl transferase, family 2
bsdcttw_03160	COG1490	D-aminoacyl-tRNA deacylase activity
bsdcttw_03200	COG1609	Transcriptional regulator
bsdcttw_03220	COG1609	Transcriptional regulator
bsdcttw_03250	COG0598	Magnesium transport protein CorA
bsdcttw_03260	COG2252	PERMEase
bsdcttw_03300	COG1609	Transcriptional regulator
bsdcttw_03310	COG1252	NADH dehydrogenase
bsdcttw_03370	COG1609	Transcriptional regulator
bsdcttw_03380	COG0267	Belongs to the bacterial ribosomal protein bL33 family
bsdcttw_03400	COG0250	Participates in transcription elongation, termination and antitermination
bsdcttw_03410	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
bsdcttw_03420	COG0081	regulation of translation
bsdcttw_03440	COG0222	ribosome binding
bsdcttw_03450	COG0085	RNA polymerase activity
bsdcttw_03460	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
bsdcttw_03480	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
bsdcttw_03490	COG0049	tRNA binding
bsdcttw_03500	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
bsdcttw_03510	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
bsdcttw_03520	COG0588	phosphoglycerate mutase activity
bsdcttw_03530	COG5001	Diguanylate cyclase
bsdcttw_03530	COG3300	MHYT domain
bsdcttw_03550	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
bsdcttw_03570	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
bsdcttw_03580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
bsdcttw_03640	COG1077	Cell shape determining protein MreB Mrl
bsdcttw_03650	COG4786	Flagellar basal body rod
bsdcttw_03680	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
bsdcttw_03690	COG1040	competence protein
bsdcttw_03710	COG2996	Protein conserved in bacteria
bsdcttw_03730	COG0251	oxidation-reduction process
bsdcttw_03770	COG0791	NLP P60 protein
bsdcttw_03790	COG0653	protein targeting
bsdcttw_03800	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
bsdcttw_03820	COG4492	Belongs to the UPF0735 family
bsdcttw_03830	COG0460	homoserine dehydrogenase
bsdcttw_03840	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
bsdcttw_03860	COG2116	formate transmembrane transporter activity
bsdcttw_03960	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
bsdcttw_03990	COG0438	transferase activity, transferring glycosyl groups
bsdcttw_04040	COG2244	polysaccharide biosynthetic process
bsdcttw_04080	COG0840	transmembrane signaling receptor activity
bsdcttw_04080	COG3290	protein histidine kinase activity
bsdcttw_04100	COG2183	response to ionizing radiation
bsdcttw_04120	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
bsdcttw_04130	COG4464	protein tyrosine phosphatase activity
bsdcttw_04170	COG4464	protein tyrosine phosphatase activity
bsdcttw_04250	COG1132	(ABC) transporter
bsdcttw_04270	COG1316	TRANSCRIPTIONal
bsdcttw_04290	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
bsdcttw_04300	COG0802	atpase or kinase
bsdcttw_04310	COG1214	PFAM Peptidase M22, glycoprotease
bsdcttw_04320	COG0456	acetyltransferase
bsdcttw_04340	COG1234	tRNA 3'-trailer cleavage
bsdcttw_04360	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
bsdcttw_04390	COG0840	transmembrane signaling receptor activity
bsdcttw_04400	COG0582	viral genome integration into host DNA
bsdcttw_04430	COG0116	Belongs to the methyltransferase superfamily
bsdcttw_04440	COG0789	Transcriptional regulator
bsdcttw_04450	COG1132	(ABC) transporter
bsdcttw_04460	COG0860	N-Acetylmuramoyl-L-alanine amidase
bsdcttw_04470	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
bsdcttw_04500	COG1216	Glycosyl transferase, family 2
bsdcttw_04510	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
bsdcttw_04530	COG3845	ABC transporter
bsdcttw_04540	COG4603	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_04550	COG1079	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_04590	COG1115	amino acid carrier protein
bsdcttw_04610	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
bsdcttw_04620	COG0544	peptidyl-prolyl cis-trans isomerase activity
bsdcttw_04640	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
bsdcttw_04650	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
bsdcttw_04660	COG0218	Necessary for normal cell division and for the maintenance of normal septation
bsdcttw_04680	COG1242	4 iron, 4 sulfur cluster binding
bsdcttw_04690	COG0281	malic enzyme
bsdcttw_04700	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
bsdcttw_04710	COG0254	rRNA binding
bsdcttw_04720	COG3872	metal-dependent enzyme
bsdcttw_04740	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
bsdcttw_04780	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
bsdcttw_04790	COG2197	response regulator
bsdcttw_04810	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
bsdcttw_04850	COG1368	sulfuric ester hydrolase activity
bsdcttw_04870	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
bsdcttw_04920	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
bsdcttw_04930	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
bsdcttw_04950	COG2207	Transcriptional regulator
bsdcttw_04950	COG3708	Transcriptional regulator
bsdcttw_04980	COG3459	Glycosyltransferase 36 associated
bsdcttw_05010	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
bsdcttw_05050	COG1671	Belongs to the UPF0178 family
bsdcttw_05070	COG1132	(ABC) transporter
bsdcttw_05080	COG1132	(ABC) transporter
bsdcttw_05100	COG1940	carbohydrate kinase activity
bsdcttw_05110	COG0673	inositol 2-dehydrogenase activity
bsdcttw_05150	COG2340	Cysteine-rich secretory protein family
bsdcttw_05170	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_05180	COG0840	transmembrane signaling receptor activity
bsdcttw_05340	COG2972	Histidine kinase
bsdcttw_05350	COG4753	response regulator
bsdcttw_05350	COG2207	Transcriptional regulator
bsdcttw_05380	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
bsdcttw_05380	COG1796	DNA polymerase
bsdcttw_05390	COG4209	transmembrane transport
bsdcttw_05410	COG0395	ABC-type sugar transport system, permease component
bsdcttw_05420	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
bsdcttw_05430	COG1486	melibiose metabolic process
bsdcttw_05570	COG1131	(ABC) transporter
bsdcttw_05600	COG0232	Belongs to the dGTPase family. Type 2 subfamily
bsdcttw_05610	COG3507	Belongs to the glycosyl hydrolase 43 family
bsdcttw_05630	COG3250	beta-galactosidase activity
bsdcttw_05690	COG1175	transmembrane transport
bsdcttw_05700	COG0395	ABC-type sugar transport system, permease component
bsdcttw_05750	COG2201	protein-glutamate methylesterase activity
bsdcttw_05760	COG2198	Histidine kinase
bsdcttw_05760	COG0643	Histidine kinase
bsdcttw_05770	COG2198	Histidine kinase
bsdcttw_05770	COG5002	protein histidine kinase activity
bsdcttw_05770	COG0784	Response regulator, receiver
bsdcttw_05780	COG0745	RESPONSE REGULATOR receiver
bsdcttw_05790	COG0835	chemotaxis
bsdcttw_05800	COG0840	transmembrane signaling receptor activity
bsdcttw_05820	COG2201	protein-glutamate methylesterase activity
bsdcttw_05850	COG1595	DNA-templated transcription, initiation
bsdcttw_05880	COG2111	Na H antiporter
bsdcttw_05880	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
bsdcttw_05890	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
bsdcttw_05900	COG3260	NADH ubiquinone oxidoreductase 20
bsdcttw_05920	COG0649	NAD binding
bsdcttw_05960	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
bsdcttw_05970	COG0298	carbon dioxide binding
bsdcttw_06000	COG1929	Belongs to the glycerate kinase type-1 family
bsdcttw_06030	COG0673	inositol 2-dehydrogenase activity
bsdcttw_06040	COG0673	inositol 2-dehydrogenase activity
bsdcttw_06070	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
bsdcttw_06080	COG3307	-O-antigen
bsdcttw_06100	COG1278	Cold shock
bsdcttw_06120	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
bsdcttw_06120	COG0674	pyruvate-flavodoxin oxidoreductase activity
bsdcttw_06120	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
bsdcttw_06120	COG1013	pyruvate-flavodoxin oxidoreductase activity
bsdcttw_06130	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
bsdcttw_06140	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
bsdcttw_06340	COG3279	Response regulator of the LytR AlgR family
bsdcttw_06400	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_06420	COG1216	Glycosyl transferase, family 2
bsdcttw_06440	COG0347	Belongs to the P(II) protein family
bsdcttw_06580	COG4149	molybdate abc transporter
bsdcttw_06590	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
bsdcttw_06620	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
bsdcttw_06650	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
bsdcttw_06660	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
bsdcttw_06670	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
bsdcttw_06700	COG1316	TRANSCRIPTIONal
bsdcttw_06720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
bsdcttw_06740	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
bsdcttw_06820	COG0436	Aminotransferase
bsdcttw_06870	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
bsdcttw_06880	COG0459	protein refolding
bsdcttw_06900	COG0516	GMP reductase activity
bsdcttw_06900	COG0517	IMP dehydrogenase activity
bsdcttw_06940	COG0573	inorganic phosphate transmembrane transporter activity
bsdcttw_06950	COG0581	inorganic phosphate transmembrane transporter activity
bsdcttw_06960	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
bsdcttw_06970	COG0704	Plays a role in the regulation of phosphate uptake
bsdcttw_06980	COG0745	RESPONSE REGULATOR receiver
bsdcttw_06990	COG5002	protein histidine kinase activity
bsdcttw_07020	COG0138	bifunctional purine biosynthesis protein purh
bsdcttw_07040	COG2169	Transcriptional regulator
bsdcttw_07060	COG0488	(ABC) transporter
bsdcttw_07080	COG2268	Band 7 protein
bsdcttw_07100	COG0745	RESPONSE REGULATOR receiver
bsdcttw_07110	COG3850	Histidine kinase
bsdcttw_07110	COG5002	protein histidine kinase activity
bsdcttw_07120	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
bsdcttw_07120	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
bsdcttw_07130	COG1307	EDD domain protein, DegV family
bsdcttw_07150	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
bsdcttw_07160	COG1074	ATP-dependent DNA helicase activity
bsdcttw_07170	COG0840	transmembrane signaling receptor activity
bsdcttw_07220	COG1070	Carbohydrate kinase
bsdcttw_07250	COG1131	(ABC) transporter
bsdcttw_07270	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
bsdcttw_07280	COG2226	methyltransferase
bsdcttw_07290	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
bsdcttw_07320	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
bsdcttw_07330	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
bsdcttw_07340	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
bsdcttw_07350	COG4447	cellulose binding
bsdcttw_07350	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
bsdcttw_07360	COG2388	GCN5-related N-acetyl-transferase
bsdcttw_07390	COG0756	dUTP diphosphatase activity
bsdcttw_07400	COG1683	Conserved Protein
bsdcttw_07440	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
bsdcttw_07450	COG1621	beta-fructofuranosidase activity
bsdcttw_07520	COG0525	valine-tRNA ligase activity
bsdcttw_07560	COG1366	Belongs to the anti-sigma-factor antagonist family
bsdcttw_07670	COG1739	Uncharacterized protein family UPF0029
bsdcttw_07690	COG0004	ammonium transporteR
bsdcttw_07720	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
bsdcttw_07740	COG0004	ammonium transporteR
bsdcttw_07750	COG0347	Belongs to the P(II) protein family
bsdcttw_07790	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
bsdcttw_07800	COG1404	Belongs to the peptidase S8 family
bsdcttw_07810	COG2267	carboxylic ester hydrolase activity
bsdcttw_07820	COG1404	Belongs to the peptidase S8 family
bsdcttw_07900	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
bsdcttw_07940	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
bsdcttw_07960	COG0456	acetyltransferase
bsdcttw_07970	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
bsdcttw_08060	COG0798	PFAM Bile acid sodium symporter
bsdcttw_08080	COG0464	growth
bsdcttw_08120	COG0653	protein targeting
bsdcttw_08160	COG1125	glycine betaine transport
bsdcttw_08160	COG0517	IMP dehydrogenase activity
bsdcttw_08170	COG1174	glycine betaine transport
bsdcttw_08190	COG0840	transmembrane signaling receptor activity
bsdcttw_08250	COG2070	2-Nitropropane dioxygenase
bsdcttw_08260	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
bsdcttw_08270	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_08280	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
bsdcttw_08290	COG0511	ligase activity, forming carbon-carbon bonds
bsdcttw_08310	COG0439	Biotin carboxylase
bsdcttw_08320	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
bsdcttw_08330	COG0825	malonyl-CoA metabolic process
bsdcttw_08350	COG2261	transglycosylase associated protein
bsdcttw_08360	COG0372	Belongs to the citrate synthase family
bsdcttw_08370	COG1803	Methylglyoxal synthase
bsdcttw_08380	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_08400	COG1592	Rubrerythrin
bsdcttw_08410	COG2033	superoxide reductase activity
bsdcttw_08420	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
bsdcttw_08440	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
bsdcttw_08440	COG0426	domain, Protein
bsdcttw_08470	COG0741	lytic transglycosylase activity
bsdcttw_08500	COG2213	PTS system mannitol-specific
bsdcttw_08500	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
bsdcttw_08510	COG3711	transcriptional antiterminator
bsdcttw_08520	COG2213	PTS system mannitol-specific
bsdcttw_08520	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
bsdcttw_08530	COG1105	Belongs to the carbohydrate kinase PfkB family
bsdcttw_08540	COG1063	alcohol dehydrogenase
bsdcttw_08560	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
bsdcttw_08570	COG2706	6-phosphogluconolactonase activity
bsdcttw_08590	COG0840	transmembrane signaling receptor activity
bsdcttw_08630	COG2972	Histidine kinase
bsdcttw_08650	COG1175	transmembrane transport
bsdcttw_08660	COG0395	ABC-type sugar transport system, permease component
bsdcttw_08670	COG2207	Transcriptional regulator
bsdcttw_08670	COG4753	response regulator
bsdcttw_08700	COG3118	belongs to the thioredoxin family
bsdcttw_08780	COG3842	ATPase activity
bsdcttw_08830	COG3250	beta-galactosidase activity
bsdcttw_08840	COG4209	transmembrane transport
bsdcttw_08850	COG0395	ABC-type sugar transport system, permease component
bsdcttw_08890	COG4565	transcriptional regulatory protein
bsdcttw_08900	COG2972	Histidine kinase
bsdcttw_08940	COG3250	beta-galactosidase activity
bsdcttw_08960	COG0312	modulator of DNA gyrase
bsdcttw_08980	COG1191	sigma factor activity
bsdcttw_09030	COG1691	(AIR) carboxylase
bsdcttw_09040	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
bsdcttw_09050	COG2203	Gaf domain
bsdcttw_09050	COG3706	GGDEF domain
bsdcttw_09050	COG4251	negative regulation of phosphorylation
bsdcttw_09050	COG5001	Diguanylate cyclase
bsdcttw_09070	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
bsdcttw_09080	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
bsdcttw_09090	COG1116	anion transmembrane transporter activity
bsdcttw_09100	COG0628	permease
bsdcttw_09140	COG1217	gtp-binding protein TYPA
bsdcttw_09180	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
bsdcttw_09190	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
bsdcttw_09200	COG1131	(ABC) transporter
bsdcttw_09240	COG2207	Transcriptional regulator
bsdcttw_09260	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
bsdcttw_09290	COG0673	inositol 2-dehydrogenase activity
bsdcttw_09310	COG0673	inositol 2-dehydrogenase activity
bsdcttw_09350	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_09350	COG4977	sequence-specific DNA binding
bsdcttw_09380	COG1070	Carbohydrate kinase
bsdcttw_09390	COG2972	Histidine kinase
bsdcttw_09420	COG4209	transmembrane transport
bsdcttw_09430	COG0395	ABC-type sugar transport system, permease component
bsdcttw_09460	COG2972	Histidine kinase
bsdcttw_09470	COG0745	RESPONSE REGULATOR receiver
bsdcttw_09500	COG4209	transmembrane transport
bsdcttw_09510	COG3833	ABC-type maltose transport systems, permease component
bsdcttw_09520	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_09570	COG3275	phosphorelay sensor kinase activity
bsdcttw_09590	COG1653	transport
bsdcttw_09600	COG4209	transmembrane transport
bsdcttw_09610	COG0395	ABC-type sugar transport system, permease component
bsdcttw_09640	COG2247	cell wall binding repeat
bsdcttw_09640	COG2385	sporulation resulting in formation of a cellular spore
bsdcttw_09680	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
bsdcttw_09690	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
bsdcttw_09690	COG0072	phenylalanine-tRNA ligase activity
bsdcttw_09750	COG3853	Toxic anion resistance protein (TelA)
bsdcttw_09760	COG0745	RESPONSE REGULATOR receiver
bsdcttw_09770	COG5002	protein histidine kinase activity
bsdcttw_09790	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
bsdcttw_09800	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
bsdcttw_09810	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
bsdcttw_09820	COG0151	Belongs to the GarS family
bsdcttw_09860	COG3880	PFAM UvrB UvrC protein
bsdcttw_09870	COG3869	Catalyzes the specific phosphorylation of arginine residues in
bsdcttw_09880	COG0542	response to heat
bsdcttw_09900	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
bsdcttw_09930	COG1592	Rubrerythrin
bsdcttw_09990	COG0343	queuine tRNA-ribosyltransferase activity
bsdcttw_10000	COG1862	Preprotein translocase
bsdcttw_10010	COG0613	PHP domain protein
bsdcttw_10040	COG0820	rRNA (adenine-C2-)-methyltransferase activity
bsdcttw_10050	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
bsdcttw_10050	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
bsdcttw_10070	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
bsdcttw_10080	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
bsdcttw_10090	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
bsdcttw_10100	COG0635	Involved in the biosynthesis of porphyrin-containing compound
bsdcttw_10120	COG1362	aminopeptidase activity
bsdcttw_10140	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
bsdcttw_10150	COG1395	domain, Protein
bsdcttw_10200	COG2017	converts alpha-aldose to the beta-anomer
bsdcttw_10210	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
bsdcttw_10240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
bsdcttw_10250	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
bsdcttw_10260	COG1120	ATPase activity
bsdcttw_10300	COG3655	Transcriptional regulator
bsdcttw_10310	COG1032	radical SAM domain protein
bsdcttw_10330	COG0723	plastoquinol--plastocyanin reductase activity
bsdcttw_10330	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
bsdcttw_10350	COG4377	Putative membrane peptidase family (DUF2324)
bsdcttw_10360	COG3290	protein histidine kinase activity
bsdcttw_10400	COG1131	(ABC) transporter
bsdcttw_10430	COG0148	phosphopyruvate hydratase activity
bsdcttw_10450	COG3764	Sortase (surface protein transpeptidase)
bsdcttw_10500	COG2755	lipolytic protein G-D-S-L family
bsdcttw_10510	COG1609	Transcriptional regulator
bsdcttw_10520	COG0395	ABC-type sugar transport system, permease component
bsdcttw_10540	COG1175	transmembrane transport
bsdcttw_10590	COG3408	Glycogen debranching enzyme
bsdcttw_10620	COG2124	cytochrome p450
bsdcttw_10660	COG0563	adenylate kinase activity
bsdcttw_10720	COG1082	Xylose isomerase domain protein TIM barrel
bsdcttw_10870	COG1132	(ABC) transporter
bsdcttw_10880	COG0534	Mate efflux family protein
bsdcttw_10910	COG0248	Ppx GppA phosphatase
bsdcttw_10920	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
bsdcttw_10970	COG2207	Transcriptional regulator
bsdcttw_10970	COG0662	Cupin 2, conserved barrel domain protein
bsdcttw_10980	COG1082	Xylose isomerase domain protein TIM barrel
bsdcttw_10990	COG0673	inositol 2-dehydrogenase activity
bsdcttw_11020	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
bsdcttw_11030	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
bsdcttw_11030	COG1328	CTP reductase activity
bsdcttw_11040	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
bsdcttw_11050	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
bsdcttw_11060	COG1307	EDD domain protein, DegV family
bsdcttw_11070	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
bsdcttw_11080	COG1285	pathogenesis
bsdcttw_11090	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
bsdcttw_11140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
bsdcttw_11160	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_11240	COG2002	toxin-antitoxin pair type II binding
bsdcttw_11280	COG3935	DnaD domain protein
bsdcttw_11380	COG0582	viral genome integration into host DNA
bsdcttw_11440	COG0740	serine-type endopeptidase activity
bsdcttw_11680	COG4824	toxin secretion phage lysis holin
bsdcttw_11690	COG1705	Flagellar rod assembly protein muramidase FlgJ
bsdcttw_11800	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
bsdcttw_11810	COG1404	Belongs to the peptidase S8 family
bsdcttw_11810	COG4935	Belongs to the peptidase S8 family
bsdcttw_11890	COG0583	DNA-binding transcription factor activity
bsdcttw_11950	COG1528	Iron-storage protein
bsdcttw_11960	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
bsdcttw_12010	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
bsdcttw_12040	COG0387	Pfam Sodium calcium exchanger
bsdcttw_12050	COG1609	Transcriptional regulator
bsdcttw_12070	COG3959	Transketolase, thiamine diphosphate binding domain
bsdcttw_12080	COG3958	Transketolase
bsdcttw_12090	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
bsdcttw_12100	COG2207	Transcriptional regulator
bsdcttw_12100	COG4753	response regulator
bsdcttw_12110	COG3275	phosphorelay sensor kinase activity
bsdcttw_12130	COG4209	transmembrane transport
bsdcttw_12140	COG0395	ABC-type sugar transport system, permease component
bsdcttw_12150	COG0534	Mate efflux family protein
bsdcttw_12170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_12190	COG0531	amino acid
bsdcttw_12200	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
bsdcttw_12240	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
bsdcttw_12290	COG0436	Aminotransferase
bsdcttw_12320	COG0017	Asparaginyl-tRNA synthetase
bsdcttw_12330	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
bsdcttw_12340	COG0154	amidase activity
bsdcttw_12350	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
bsdcttw_12380	COG0069	glutamate synthase activity
bsdcttw_12380	COG0070	glutamate synthase
bsdcttw_12380	COG0067	glutamate synthase
bsdcttw_12390	COG0493	'glutamate synthase
bsdcttw_12420	COG2267	carboxylic ester hydrolase activity
bsdcttw_12430	COG1312	Catalyzes the dehydration of D-mannonate
bsdcttw_12440	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_12470	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
bsdcttw_12480	COG0504	CTP synthase activity
bsdcttw_12490	COG1307	EDD domain protein, DegV family
bsdcttw_12500	COG4447	cellulose binding
bsdcttw_12500	COG5297	Belongs to the glycosyl hydrolase family 6
bsdcttw_12540	COG3209	COG3209 Rhs family protein
bsdcttw_12610	COG1609	Transcriptional regulator
bsdcttw_12620	COG4209	transmembrane transport
bsdcttw_12630	COG0395	ABC-type sugar transport system, permease component
bsdcttw_12650	COG1621	beta-fructofuranosidase activity
bsdcttw_12680	COG1609	Transcriptional regulator
bsdcttw_12690	COG1686	Belongs to the peptidase S11 family
bsdcttw_12710	COG3976	FMN-binding domain protein
bsdcttw_12710	COG1053	succinate dehydrogenase
bsdcttw_12720	COG0551	DNA topoisomerase type I activity
bsdcttw_12720	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
bsdcttw_12740	COG1956	GAF domain-containing protein
bsdcttw_12790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
bsdcttw_12800	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
bsdcttw_12810	COG0726	polysaccharide deacetylase
bsdcttw_12810	COG1649	PFAM Uncharacterised BCR, COG1649
bsdcttw_12820	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
bsdcttw_12820	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
bsdcttw_12840	COG0523	cobalamin synthesis protein
bsdcttw_12850	COG0701	Predicted permease
bsdcttw_12870	COG0267	Belongs to the bacterial ribosomal protein bL33 family
bsdcttw_12880	COG0803	Belongs to the bacterial solute-binding protein 9 family
bsdcttw_12890	COG1121	(ABC) transporter
bsdcttw_12900	COG1108	ABC-type Mn2 Zn2 transport systems permease components
bsdcttw_12930	COG2207	Transcriptional regulator
bsdcttw_12940	COG4209	transmembrane transport
bsdcttw_12950	COG0395	ABC-type sugar transport system, permease component
bsdcttw_12960	COG1653	transport
bsdcttw_12970	COG0840	transmembrane signaling receptor activity
bsdcttw_13000	COG2207	Transcriptional regulator
bsdcttw_13040	COG5566	PFAM Mor transcription activator
bsdcttw_13050	COG2326	polyphosphate kinase activity
bsdcttw_13060	COG0840	transmembrane signaling receptor activity
bsdcttw_13070	COG0840	transmembrane signaling receptor activity
bsdcttw_13100	COG0789	Transcriptional regulator
bsdcttw_13120	COG1331	Highly conserved protein containing a thioredoxin domain
bsdcttw_13130	COG2094	Belongs to the DNA glycosylase MPG family
bsdcttw_13170	COG2972	Histidine kinase
bsdcttw_13180	COG4753	response regulator
bsdcttw_13180	COG2207	Transcriptional regulator
bsdcttw_13200	COG1175	transmembrane transport
bsdcttw_13210	COG0395	ABC-type sugar transport system, permease component
bsdcttw_13240	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_13260	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
bsdcttw_13270	COG1396	sequence-specific DNA binding
bsdcttw_13300	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
bsdcttw_13350	COG4948	Mandelate Racemase Muconate Lactonizing
bsdcttw_13370	COG0277	FAD linked oxidase domain protein
bsdcttw_13380	COG2972	Histidine kinase
bsdcttw_13390	COG2197	response regulator
bsdcttw_13400	COG1653	transport
bsdcttw_13430	COG1696	Membrane protein involved in D-alanine export
bsdcttw_13570	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
bsdcttw_13580	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
bsdcttw_13590	COG2205	protein histidine kinase activity
bsdcttw_13600	COG0745	RESPONSE REGULATOR receiver
bsdcttw_13640	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
bsdcttw_13640	COG0646	methionine synthase
bsdcttw_13660	COG1410	methionine synthase
bsdcttw_13660	COG0646	methionine synthase
bsdcttw_13670	COG1846	Transcriptional regulator
bsdcttw_13730	COG0789	Transcriptional regulator
bsdcttw_13750	COG0534	Mate efflux family protein
bsdcttw_13760	COG0739	heme binding
bsdcttw_13770	COG1595	DNA-templated transcription, initiation
bsdcttw_13790	COG4977	sequence-specific DNA binding
bsdcttw_13850	COG0367	asparagine synthase
bsdcttw_13970	COG4209	transmembrane transport
bsdcttw_13980	COG0395	ABC-type sugar transport system, permease component
bsdcttw_13990	COG1653	transport
bsdcttw_14000	COG0445	tRNA wobble uridine modification
bsdcttw_14040	COG3459	Glycosyltransferase 36 associated
bsdcttw_14050	COG4753	response regulator
bsdcttw_14050	COG2207	Transcriptional regulator
bsdcttw_14080	COG0277	FAD linked oxidase domain protein
bsdcttw_14100	COG5632	N-Acetylmuramoyl-L-alanine amidase
bsdcttw_14100	COG3409	Peptidoglycan-binding domain 1 protein
bsdcttw_14110	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
bsdcttw_14150	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
bsdcttw_14180	COG1192	Involved in chromosome partitioning
bsdcttw_14190	COG1475	DNA binding
bsdcttw_14550	COG2003	Belongs to the UPF0758 family
bsdcttw_14560	COG0629	single-stranded DNA binding
bsdcttw_14730	COG2132	Multicopper oxidase
bsdcttw_14810	COG5002	protein histidine kinase activity
bsdcttw_14820	COG2204	response regulator
bsdcttw_14850	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
bsdcttw_14880	COG3852	Histidine kinase
bsdcttw_14910	COG2217	Heavy metal translocating P-type atpase
bsdcttw_14920	COG2608	mercury ion transmembrane transporter activity
bsdcttw_14940	COG2226	methyltransferase
bsdcttw_15000	COG0653	protein targeting
bsdcttw_15060	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
bsdcttw_15090	COG1846	Transcriptional regulator
bsdcttw_15100	COG2226	methyltransferase
bsdcttw_15130	COG0640	Transcriptional regulator
bsdcttw_15160	COG0390	transport system, permease component
bsdcttw_15170	COG4619	ABC transporter
bsdcttw_15190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
bsdcttw_15200	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_15200	COG2207	Transcriptional regulator
bsdcttw_15260	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_15280	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
bsdcttw_15330	COG4496	protein, YerC YecD
bsdcttw_15360	COG0446	pyridine nucleotide-disulphide oxidoreductase
bsdcttw_15380	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
bsdcttw_15400	COG0644	oxidoreductase
bsdcttw_15420	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_15420	COG2207	Transcriptional regulator
bsdcttw_15460	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
bsdcttw_15460	COG2508	Transcriptional regulator
bsdcttw_15480	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
bsdcttw_15490	COG0655	NAD(P)H dehydrogenase (quinone) activity
bsdcttw_15520	COG1309	transcriptional regulator
bsdcttw_15530	COG0604	alcohol dehydrogenase
bsdcttw_15530	COG3321	synthase
bsdcttw_15530	COG4221	oxidoreductase activity
bsdcttw_15530	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
bsdcttw_15540	COG1309	transcriptional regulator
bsdcttw_15640	COG0693	protein deglycase activity
bsdcttw_15670	COG4716	Myosin-crossreactive antigen
bsdcttw_15680	COG0820	rRNA (adenine-C2-)-methyltransferase activity
bsdcttw_15710	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
bsdcttw_15780	COG0583	DNA-binding transcription factor activity
bsdcttw_15790	COG3976	FMN-binding domain protein
bsdcttw_15790	COG1053	succinate dehydrogenase
bsdcttw_15790	COG0431	NADPH-dependent FMN reductase
bsdcttw_15810	COG0277	FAD linked oxidase domain protein
bsdcttw_15830	COG1309	transcriptional regulator
bsdcttw_15870	COG2207	Transcriptional regulator
bsdcttw_15890	COG0583	DNA-binding transcription factor activity
bsdcttw_15920	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
bsdcttw_15940	COG0412	Dienelactone hydrolase
bsdcttw_15960	COG1404	Belongs to the peptidase S8 family
bsdcttw_15970	COG4989	oxidoreductase activity
bsdcttw_15990	COG1573	uracil-dna glycosylase
bsdcttw_16010	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
bsdcttw_16040	COG5002	protein histidine kinase activity
bsdcttw_16070	COG5002	protein histidine kinase activity
bsdcttw_16090	COG0577	efflux transmembrane transporter activity
bsdcttw_16100	COG1136	(ABC) transporter
bsdcttw_16130	COG0840	transmembrane signaling receptor activity
bsdcttw_16130	COG5278	phosphoserine phosphatase activity
bsdcttw_16140	COG3275	phosphorelay sensor kinase activity
bsdcttw_16150	COG2207	Transcriptional regulator
bsdcttw_16150	COG4753	response regulator
bsdcttw_16150	COG4753	response regulator
bsdcttw_16150	COG2207	Transcriptional regulator
bsdcttw_16160	COG4209	transmembrane transport
bsdcttw_16170	COG0395	ABC-type sugar transport system, permease component
bsdcttw_16200	COG3250	beta-galactosidase activity
bsdcttw_16210	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_16210	COG2207	Transcriptional regulator
bsdcttw_16220	COG2723	6-phospho-beta-galactosidase activity
bsdcttw_16230	COG1940	carbohydrate kinase activity
bsdcttw_16280	COG0583	DNA-binding transcription factor activity
bsdcttw_16300	COG2207	Transcriptional regulator
bsdcttw_16300	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_16320	COG0673	inositol 2-dehydrogenase activity
bsdcttw_16410	COG1733	regulation of RNA biosynthetic process
bsdcttw_16430	COG0346	lactoylglutathione lyase activity
bsdcttw_16450	COG2207	Transcriptional regulator
bsdcttw_16490	COG0003	Pfam Anion-transporting ATPase
bsdcttw_16510	COG0003	Pfam Anion-transporting ATPase
bsdcttw_16520	COG3158	transport of potassium into the cell
bsdcttw_16540	COG0789	Transcriptional regulator
bsdcttw_16560	COG1193	negative regulation of DNA recombination
bsdcttw_16570	COG1486	melibiose metabolic process
bsdcttw_16580	COG2971	BadF BadG BcrA BcrD
bsdcttw_16600	COG0577	efflux transmembrane transporter activity
bsdcttw_16600	COG1136	(ABC) transporter
bsdcttw_16620	COG5002	protein histidine kinase activity
bsdcttw_16630	COG0745	RESPONSE REGULATOR receiver
bsdcttw_16650	COG1131	(ABC) transporter
bsdcttw_16670	COG1175	transmembrane transport
bsdcttw_16680	COG0395	ABC-type sugar transport system, permease component
bsdcttw_16700	COG2972	Histidine kinase
bsdcttw_16710	COG0745	RESPONSE REGULATOR receiver
bsdcttw_16720	COG0363	glucosamine-6-phosphate deaminase activity
bsdcttw_16730	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
bsdcttw_16740	COG3525	Glycosyl hydrolase, family 20, catalytic domain
bsdcttw_16760	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
bsdcttw_16760	COG3711	transcriptional antiterminator
bsdcttw_16770	COG1447	Phosphotransferase system cellobiose-specific component IIA
bsdcttw_16790	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
bsdcttw_16800	COG2723	6-phospho-beta-galactosidase activity
bsdcttw_16820	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
bsdcttw_16860	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
bsdcttw_16870	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
bsdcttw_16910	COG0488	(ABC) transporter
bsdcttw_16950	COG0534	Mate efflux family protein
bsdcttw_17010	COG3459	Glycosyltransferase 36 associated
bsdcttw_17020	COG3459	Glycosyltransferase 36 associated
bsdcttw_17050	COG0306	phosphate transporter
bsdcttw_17080	COG3848	Pyruvate phosphate dikinase
bsdcttw_17080	COG0574	Belongs to the PEP-utilizing enzyme family
bsdcttw_17090	COG1131	(ABC) transporter
bsdcttw_17120	COG0583	DNA-binding transcription factor activity
bsdcttw_17130	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
bsdcttw_17160	COG0778	Nitroreductase
bsdcttw_17200	COG4209	transmembrane transport
bsdcttw_17210	COG0395	ABC-type sugar transport system, permease component
bsdcttw_17230	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
bsdcttw_17240	COG0572	uridine kinase
bsdcttw_17270	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_17280	COG4166	transmembrane transport
bsdcttw_17290	COG0601	transmembrane transport
bsdcttw_17300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
bsdcttw_17310	COG0444	Belongs to the ABC transporter superfamily
bsdcttw_17320	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_17340	COG0583	DNA-binding transcription factor activity
bsdcttw_17370	COG2814	Major facilitator Superfamily
bsdcttw_17470	COG1486	melibiose metabolic process
bsdcttw_17490	COG4977	sequence-specific DNA binding
bsdcttw_17500	COG1733	regulation of RNA biosynthetic process
bsdcttw_17580	COG2271	Major facilitator Superfamily
bsdcttw_17590	COG0577	efflux transmembrane transporter activity
bsdcttw_17600	COG1136	(ABC) transporter
bsdcttw_17650	COG5002	protein histidine kinase activity
bsdcttw_17700	COG1307	EDD domain protein, DegV family
bsdcttw_17710	COG2207	Transcriptional regulator
bsdcttw_17710	COG3708	Transcriptional regulator
bsdcttw_17730	COG0823	Involved in the tonB-independent uptake of proteins
bsdcttw_17760	COG1959	2 iron, 2 sulfur cluster binding
bsdcttw_17830	COG1033	growth of symbiont in host cell
bsdcttw_17830	COG2409	Drug exporters of the RND superfamily
bsdcttw_17850	COG1695	Transcriptional regulator
bsdcttw_17860	COG0772	Belongs to the SEDS family
bsdcttw_17870	COG0824	Thioesterase
bsdcttw_17960	COG2855	membrane
bsdcttw_17970	COG0583	DNA-binding transcription factor activity
bsdcttw_17980	COG3706	GGDEF domain
bsdcttw_18000	COG3250	beta-galactosidase activity
bsdcttw_18010	COG2233	PERMEase
bsdcttw_18050	COG0477	Major facilitator Superfamily
bsdcttw_18060	COG1846	Transcriptional regulator
bsdcttw_18080	COG3022	response to hydroperoxide
bsdcttw_18120	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
bsdcttw_18160	COG1131	(ABC) transporter
bsdcttw_18200	COG2197	response regulator
bsdcttw_18240	COG1811	Na channel or pump
bsdcttw_18270	COG1368	sulfuric ester hydrolase activity
bsdcttw_18290	COG1151	hydroxylamine reductase activity
bsdcttw_18340	COG0488	(ABC) transporter
bsdcttw_18350	COG0583	DNA-binding transcription factor activity
bsdcttw_18370	COG2226	methyltransferase
bsdcttw_18410	COG4716	Myosin-crossreactive antigen
bsdcttw_18430	COG1950	PFAM Membrane protein of
bsdcttw_18520	COG2207	Transcriptional regulator
bsdcttw_18530	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
bsdcttw_18550	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
bsdcttw_18560	COG1609	Transcriptional regulator
bsdcttw_18570	COG1175	transmembrane transport
bsdcttw_18580	COG3833	ABC-type maltose transport systems, permease component
bsdcttw_18590	COG2182	Extracellular solute-binding protein
bsdcttw_18650	COG1725	Transcriptional regulator
bsdcttw_18660	COG1131	(ABC) transporter
bsdcttw_18680	COG0534	Mate efflux family protein
bsdcttw_18700	COG1687	branched-chain amino acid
bsdcttw_18710	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
bsdcttw_18730	COG2207	Transcriptional regulator
bsdcttw_18750	COG3384	dioxygenase
bsdcttw_18770	COG2207	Transcriptional regulator
bsdcttw_18780	COG0740	serine-type endopeptidase activity
bsdcttw_18800	COG0583	DNA-binding transcription factor activity
bsdcttw_18810	COG0622	Phosphoesterase
bsdcttw_18820	COG0527	aspartate kinase activity
bsdcttw_18830	COG0697	spore germination
bsdcttw_18840	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
bsdcttw_18860	COG3620	sequence-specific DNA binding
bsdcttw_18870	COG1132	(ABC) transporter
bsdcttw_18900	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
bsdcttw_18910	COG1971	Probably functions as a manganese efflux pump
bsdcttw_18940	COG1321	iron dependent repressor
bsdcttw_18990	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_19100	COG1309	transcriptional regulator
bsdcttw_19130	COG0667	Aldo Keto reductase
bsdcttw_19180	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
bsdcttw_19200	COG1122	ATPase activity
bsdcttw_19310	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_19310	COG4977	sequence-specific DNA binding
bsdcttw_19350	COG0534	Mate efflux family protein
bsdcttw_19380	COG1309	transcriptional regulator
bsdcttw_19400	COG0745	RESPONSE REGULATOR receiver
bsdcttw_19410	COG5002	protein histidine kinase activity
bsdcttw_19410	COG3850	Histidine kinase
bsdcttw_19440	COG1228	amidohydrolase
bsdcttw_19450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
bsdcttw_19460	COG1082	Xylose isomerase domain protein TIM barrel
bsdcttw_19490	COG0531	amino acid
bsdcttw_19520	COG2188	Transcriptional regulator
bsdcttw_19620	COG1695	Transcriptional regulator
bsdcttw_19650	COG3708	Transcriptional regulator
bsdcttw_19650	COG2207	Transcriptional regulator
bsdcttw_19670	COG2188	Transcriptional regulator
bsdcttw_19690	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
bsdcttw_19710	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
bsdcttw_19730	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_19790	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
bsdcttw_19800	COG0484	heat shock protein binding
bsdcttw_19820	COG4948	Mandelate Racemase Muconate Lactonizing
bsdcttw_19850	COG2972	Histidine kinase
bsdcttw_19860	COG4565	transcriptional regulatory protein
bsdcttw_19890	COG0395	ABC-type sugar transport system, permease component
bsdcttw_19960	COG2378	regulation of single-species biofilm formation
bsdcttw_19970	COG1309	transcriptional regulator
bsdcttw_19980	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
bsdcttw_20070	COG1136	(ABC) transporter
bsdcttw_20070	COG0577	efflux transmembrane transporter activity
bsdcttw_20090	COG0789	Transcriptional regulator
bsdcttw_20170	COG1686	Belongs to the peptidase S11 family
bsdcttw_20240	COG0275	rRNA processing
bsdcttw_20250	COG0366	Alpha amylase catalytic
bsdcttw_20290	COG0322	excinuclease ABC activity
bsdcttw_20300	COG0596	Alpha beta hydrolase
bsdcttw_20320	COG2188	Transcriptional regulator
bsdcttw_20330	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_20380	COG3706	GGDEF domain
bsdcttw_20390	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
bsdcttw_20410	COG3191	aminopeptidase activity
bsdcttw_20420	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
bsdcttw_20470	COG1846	Transcriptional regulator
bsdcttw_20490	COG1132	(ABC) transporter
bsdcttw_20510	COG0456	acetyltransferase
bsdcttw_20540	COG2972	Histidine kinase
bsdcttw_20550	COG4753	response regulator
bsdcttw_20550	COG2207	Transcriptional regulator
bsdcttw_20580	COG0601	transmembrane transport
bsdcttw_20590	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
bsdcttw_20600	COG0444	Belongs to the ABC transporter superfamily
bsdcttw_20610	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_20640	COG1476	TRANSCRIPTIONal
bsdcttw_20660	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
bsdcttw_20680	COG0626	cystathionine gamma-synthase activity
bsdcttw_20690	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
bsdcttw_20740	COG1609	Transcriptional regulator
bsdcttw_20770	COG4209	transmembrane transport
bsdcttw_20780	COG0395	ABC-type sugar transport system, permease component
bsdcttw_20810	COG2226	methyltransferase
bsdcttw_20840	COG2199	diguanylate cyclase activity
bsdcttw_20860	COG1620	l-lactate permease
bsdcttw_20870	COG2086	electron transfer activity
bsdcttw_20880	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
bsdcttw_20890	COG0277	FAD linked oxidase domain protein
bsdcttw_20900	COG0840	transmembrane signaling receptor activity
bsdcttw_20920	COG1376	ErfK ybiS ycfS ynhG family protein
bsdcttw_20940	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
bsdcttw_20980	COG1309	transcriptional regulator
bsdcttw_20990	COG2814	Major facilitator Superfamily
bsdcttw_21010	COG5001	Diguanylate cyclase
bsdcttw_21010	COG3300	MHYT domain
bsdcttw_21020	COG5646	InterPro IPR014922
bsdcttw_21110	COG1695	Transcriptional regulator
bsdcttw_21120	COG4977	sequence-specific DNA binding
bsdcttw_21590	COG3548	integral membrane protein
bsdcttw_21600	COG2205	protein histidine kinase activity
bsdcttw_21610	COG0745	RESPONSE REGULATOR receiver
bsdcttw_21690	COG2203	Gaf domain
bsdcttw_21690	COG2199	diguanylate cyclase activity
bsdcttw_21750	COG0535	radical SAM domain protein
bsdcttw_21760	COG1131	(ABC) transporter
bsdcttw_21830	COG3507	Belongs to the glycosyl hydrolase 43 family
bsdcttw_21850	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
bsdcttw_21860	COG0583	DNA-binding transcription factor activity
bsdcttw_21900	COG2508	Transcriptional regulator
bsdcttw_21920	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_21930	COG1346	cytolysis
bsdcttw_21950	COG2186	Transcriptional regulator
bsdcttw_21980	COG1396	sequence-specific DNA binding
bsdcttw_22040	COG0395	ABC-type sugar transport system, permease component
bsdcttw_22050	COG1175	transmembrane transport
bsdcttw_22060	COG1653	transport
bsdcttw_22080	COG2972	Histidine kinase
bsdcttw_22090	COG4753	response regulator
bsdcttw_22090	COG2207	Transcriptional regulator
bsdcttw_22110	COG1070	Carbohydrate kinase
bsdcttw_22120	COG4806	L-rhamnose isomerase
bsdcttw_22130	COG0235	Class ii aldolase
bsdcttw_22150	COG0375	protein maturation
bsdcttw_22170	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
bsdcttw_22210	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
bsdcttw_22230	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
bsdcttw_22290	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
bsdcttw_22340	COG1797	cobyrinic acid a,c-diamide synthase activity
bsdcttw_22360	COG1122	ATPase activity
bsdcttw_22370	COG0310	cobalt ion transport
bsdcttw_22410	COG2188	Transcriptional regulator
bsdcttw_22420	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
bsdcttw_22430	COG2201	protein-glutamate methylesterase activity
bsdcttw_22440	COG2205	protein histidine kinase activity
bsdcttw_22450	COG0515	serine threonine protein kinase
bsdcttw_22450	COG2815	serine threonine protein kinase
bsdcttw_22470	COG1714	RDD family
bsdcttw_22480	COG0515	serine threonine protein kinase
bsdcttw_22480	COG2815	serine threonine protein kinase
bsdcttw_22510	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
bsdcttw_22520	COG0631	protein serine/threonine phosphatase activity
bsdcttw_22530	COG1716	ATPase activity
bsdcttw_22540	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
bsdcttw_22550	COG1846	Transcriptional regulator
bsdcttw_22580	COG1846	Transcriptional regulator
bsdcttw_22600	COG1131	(ABC) transporter
bsdcttw_22630	COG1733	regulation of RNA biosynthetic process
bsdcttw_22660	COG0785	Cytochrome C biogenesis protein
bsdcttw_22680	COG0519	Catalyzes the synthesis of GMP from XMP
bsdcttw_22730	COG0572	uridine kinase
bsdcttw_22800	COG3459	Glycosyltransferase 36 associated
bsdcttw_22810	COG4209	transmembrane transport
bsdcttw_22820	COG0395	ABC-type sugar transport system, permease component
bsdcttw_22860	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_22890	COG1181	Belongs to the D-alanine--D-alanine ligase family
bsdcttw_22940	COG1012	belongs to the aldehyde dehydrogenase family
bsdcttw_22950	COG0484	heat shock protein binding
bsdcttw_22980	COG0025	NhaP-type Na H and K H
bsdcttw_22990	COG0667	Aldo Keto reductase
bsdcttw_23010	COG0840	transmembrane signaling receptor activity
bsdcttw_23030	COG0551	DNA topoisomerase type I activity
bsdcttw_23030	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
bsdcttw_23070	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_23080	COG1725	Transcriptional regulator
bsdcttw_23120	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_23170	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
bsdcttw_23210	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
bsdcttw_23230	COG1136	(ABC) transporter
bsdcttw_23260	COG0346	lactoylglutathione lyase activity
bsdcttw_23280	COG1151	hydroxylamine reductase activity
bsdcttw_23320	COG0406	alpha-ribazole phosphatase activity
bsdcttw_23340	COG1136	(ABC) transporter
bsdcttw_23350	COG2205	protein histidine kinase activity
bsdcttw_23350	COG2198	Histidine kinase
bsdcttw_23350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
bsdcttw_23350	COG0784	Response regulator, receiver
bsdcttw_23360	COG0745	RESPONSE REGULATOR receiver
bsdcttw_23380	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
bsdcttw_23400	COG2205	protein histidine kinase activity
bsdcttw_23430	COG2814	Major facilitator Superfamily
bsdcttw_23440	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
bsdcttw_23450	COG0569	domain protein
bsdcttw_23480	COG0444	Belongs to the ABC transporter superfamily
bsdcttw_23490	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_23500	COG0601	transmembrane transport
bsdcttw_23530	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_23540	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
bsdcttw_23550	COG0840	transmembrane signaling receptor activity
bsdcttw_23590	COG0124	histidyl-tRNA synthetase
bsdcttw_23630	COG1131	(ABC) transporter
bsdcttw_23650	COG1136	(ABC) transporter
bsdcttw_23650	COG0577	efflux transmembrane transporter activity
bsdcttw_23650	COG0577	efflux transmembrane transporter activity
bsdcttw_23650	COG1136	(ABC) transporter
bsdcttw_23670	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
bsdcttw_23680	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
bsdcttw_23720	COG1653	transport
bsdcttw_23740	COG0395	ABC-type sugar transport system, permease component
bsdcttw_23780	COG0395	ABC-type sugar transport system, permease component
bsdcttw_23800	COG1609	Transcriptional regulator
bsdcttw_23820	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
bsdcttw_23850	COG0517	IMP dehydrogenase activity
bsdcttw_23870	COG1393	Belongs to the ArsC family
bsdcttw_23910	COG1606	tRNA processing
bsdcttw_23930	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
bsdcttw_23980	COG0300	oxidoreductase activity
bsdcttw_24010	COG2957	Belongs to the agmatine deiminase family
bsdcttw_24040	COG0386	Belongs to the glutathione peroxidase family
bsdcttw_24050	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
bsdcttw_24060	COG1879	ABC-type sugar transport system periplasmic component
bsdcttw_24080	COG0765	amino acid transport
bsdcttw_24090	COG1126	abc transporter atp-binding protein
bsdcttw_24110	COG3858	chitin binding
bsdcttw_24110	COG1388	LysM domain
bsdcttw_24130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
bsdcttw_24140	COG1846	Transcriptional regulator
bsdcttw_24150	COG0386	Belongs to the glutathione peroxidase family
bsdcttw_24160	COG0840	transmembrane signaling receptor activity
bsdcttw_24170	COG1486	melibiose metabolic process
bsdcttw_24190	COG3250	beta-galactosidase activity
bsdcttw_24210	COG1918	ferrous iron import across plasma membrane
bsdcttw_24240	COG1404	Belongs to the peptidase S8 family
bsdcttw_24250	COG0586	Pfam SNARE associated Golgi protein
bsdcttw_24270	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
bsdcttw_24280	COG0363	glucosamine-6-phosphate deaminase activity
bsdcttw_24300	COG1253	flavin adenine dinucleotide binding
bsdcttw_24350	COG0396	ATPase activity
bsdcttw_24360	COG0719	Fe-S assembly protein
bsdcttw_24370	COG0719	Fe-S assembly protein
bsdcttw_24380	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
bsdcttw_24390	COG0822	iron-sulfur transferase activity
bsdcttw_24420	COG0456	acetyltransferase
bsdcttw_24430	COG0860	N-Acetylmuramoyl-L-alanine amidase
bsdcttw_24460	COG0404	The glycine cleavage system catalyzes the degradation of glycine
bsdcttw_24470	COG0509	glycine decarboxylation via glycine cleavage system
bsdcttw_24480	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
bsdcttw_24490	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
bsdcttw_24500	COG0095	Lipoate-protein ligase
bsdcttw_24510	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
bsdcttw_24530	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
bsdcttw_24540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
bsdcttw_24550	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
bsdcttw_24560	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
bsdcttw_24570	COG0745	RESPONSE REGULATOR receiver
bsdcttw_24580	COG0673	inositol 2-dehydrogenase activity
bsdcttw_24590	COG0745	RESPONSE REGULATOR receiver
bsdcttw_24600	COG0642	Histidine kinase
bsdcttw_24610	COG1136	(ABC) transporter
bsdcttw_24630	COG1760	l-serine dehydratase
bsdcttw_24640	COG1760	l-serine dehydratase
bsdcttw_24690	COG1983	PspC domain protein
bsdcttw_24710	COG0840	transmembrane signaling receptor activity
bsdcttw_24740	COG1918	ferrous iron import across plasma membrane
bsdcttw_24740	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
bsdcttw_24750	COG1918	ferrous iron import across plasma membrane
bsdcttw_24750	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
bsdcttw_24790	COG1131	(ABC) transporter
bsdcttw_24820	COG1104	cysteine desulfurase activity
bsdcttw_24830	COG0037	tRNA processing
bsdcttw_24840	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
bsdcttw_24860	COG0287	Prephenate dehydrogenase
bsdcttw_24870	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
bsdcttw_24880	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
bsdcttw_24930	COG1940	carbohydrate kinase activity
bsdcttw_24940	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
bsdcttw_24960	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
bsdcttw_24970	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
bsdcttw_24980	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
bsdcttw_24990	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
bsdcttw_25000	COG2207	Transcriptional regulator
bsdcttw_25000	COG3708	Transcriptional regulator
bsdcttw_25010	COG2207	Transcriptional regulator
bsdcttw_25010	COG3708	Transcriptional regulator
bsdcttw_25090	COG0454	-acetyltransferase
bsdcttw_25110	COG2195	Cleaves the N-terminal amino acid of tripeptides
bsdcttw_25120	COG0129	dihydroxy-acid dehydratase activity
bsdcttw_25130	COG0028	Belongs to the TPP enzyme family
bsdcttw_25140	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
bsdcttw_25150	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_25180	COG1482	cell wall glycoprotein biosynthetic process
bsdcttw_25200	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
bsdcttw_25210	COG0668	transmembrane transport
bsdcttw_25240	COG1501	Belongs to the glycosyl hydrolase 31 family
bsdcttw_25300	COG1307	EDD domain protein, DegV family
bsdcttw_25370	COG2972	Histidine kinase
bsdcttw_25380	COG3279	Response regulator of the LytR AlgR family
bsdcttw_25390	COG4213	ABC transporter substrate-binding protein
bsdcttw_25420	COG4214	carbohydrate transport
bsdcttw_25440	COG2315	Protein conserved in bacteria
bsdcttw_25460	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
bsdcttw_25460	COG0512	Glutamine amidotransferase of anthranilate synthase
bsdcttw_25470	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
bsdcttw_25480	COG0134	indole-3-glycerol-phosphate synthase activity
bsdcttw_25500	COG0133	tryptophan synthase activity
bsdcttw_25550	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
bsdcttw_25560	COG1132	(ABC) transporter
bsdcttw_25570	COG1132	(ABC) transporter
bsdcttw_25610	COG1959	2 iron, 2 sulfur cluster binding
bsdcttw_25630	COG0431	NADPH-dependent FMN reductase
bsdcttw_25740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
bsdcttw_25790	COG1335	isochorismatase
bsdcttw_25800	COG1011	Hydrolase
bsdcttw_25830	COG0519	Catalyzes the synthesis of GMP from XMP
bsdcttw_25950	COG0640	Transcriptional regulator
bsdcttw_25960	COG2217	Heavy metal translocating P-type atpase
bsdcttw_25970	COG2217	Heavy metal translocating P-type atpase
bsdcttw_26070	COG2226	methyltransferase
bsdcttw_26150	COG1959	2 iron, 2 sulfur cluster binding
bsdcttw_26160	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_26170	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_26180	COG0789	Transcriptional regulator
bsdcttw_26190	COG0656	L-ascorbic acid biosynthetic process
bsdcttw_26320	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
bsdcttw_26350	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
bsdcttw_26400	COG5577	PFAM Coat F domain
bsdcttw_26420	COG1063	alcohol dehydrogenase
bsdcttw_26430	COG5577	PFAM Coat F domain
bsdcttw_26460	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_26470	COG3973	AAA domain
bsdcttw_26500	COG0346	lactoylglutathione lyase activity
bsdcttw_26510	COG0110	maltose O-acetyltransferase activity
bsdcttw_26530	COG0535	radical SAM domain protein
bsdcttw_26550	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
bsdcttw_26560	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
bsdcttw_26580	COG1649	PFAM Uncharacterised BCR, COG1649
bsdcttw_26600	COG2247	cell wall binding repeat
bsdcttw_26600	COG0860	N-Acetylmuramoyl-L-alanine amidase
bsdcttw_26610	COG4974	Belongs to the 'phage' integrase family
bsdcttw_26620	COG0574	Belongs to the PEP-utilizing enzyme family
bsdcttw_26620	COG3848	Pyruvate phosphate dikinase
bsdcttw_26670	COG1418	mRNA catabolic process
bsdcttw_26770	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
bsdcttw_26860	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
bsdcttw_26890	COG2244	polysaccharide biosynthetic process
bsdcttw_26940	COG1086	Polysaccharide biosynthesis protein
bsdcttw_26970	COG1215	transferase activity, transferring glycosyl groups
bsdcttw_26990	COG0438	transferase activity, transferring glycosyl groups
bsdcttw_27010	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
bsdcttw_27060	COG1388	LysM domain
bsdcttw_27070	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
bsdcttw_27100	COG0799	negative regulation of ribosome biogenesis
bsdcttw_27110	COG1713	HD superfamily hydrolase involved in NAD metabolism
bsdcttw_27120	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
bsdcttw_27130	COG1534	Rna-binding protein
bsdcttw_27140	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
bsdcttw_27150	COG0211	Belongs to the bacterial ribosomal protein bL27 family
bsdcttw_27170	COG0261	This protein binds to 23S rRNA in the presence of protein L20
bsdcttw_27200	COG1819	glycosyl
bsdcttw_27220	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
bsdcttw_27230	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
bsdcttw_27290	COG1172	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_27300	COG1172	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_27320	COG4213	ABC transporter substrate-binding protein
bsdcttw_27330	COG1879	ABC-type sugar transport system periplasmic component
bsdcttw_27340	COG2972	Histidine kinase
bsdcttw_27350	COG2207	Transcriptional regulator
bsdcttw_27350	COG4753	response regulator
bsdcttw_27360	COG0789	Transcriptional regulator
bsdcttw_27390	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
bsdcttw_27420	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
bsdcttw_27480	COG2801	Transposase and inactivated derivatives
bsdcttw_27530	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
bsdcttw_27550	COG1686	Belongs to the peptidase S11 family
bsdcttw_27560	COG0252	asparaginase activity
bsdcttw_27630	COG0840	transmembrane signaling receptor activity
bsdcttw_27660	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
bsdcttw_27670	COG0659	secondary active sulfate transmembrane transporter activity
bsdcttw_27680	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
bsdcttw_27730	COG0564	pseudouridine synthase activity
bsdcttw_27750	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
bsdcttw_27760	COG3599	regulation of cell shape
bsdcttw_27780	COG1799	cell septum assembly
bsdcttw_27790	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
bsdcttw_27810	COG2155	Conserved Protein
bsdcttw_27830	COG1686	Belongs to the peptidase S11 family
bsdcttw_27840	COG1803	Methylglyoxal synthase
bsdcttw_27850	COG0772	Belongs to the SEDS family
bsdcttw_27860	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
bsdcttw_27870	COG2894	cell division
bsdcttw_27880	COG0850	regulation of cytokinetic process
bsdcttw_27890	COG0768	penicillin binding
bsdcttw_27930	COG2003	Belongs to the UPF0758 family
bsdcttw_27950	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
bsdcttw_27960	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
bsdcttw_27980	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
bsdcttw_27990	COG0328	RNA-DNA hybrid ribonuclease activity
bsdcttw_28120	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
bsdcttw_28150	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
bsdcttw_28160	COG3103	Sh3 type 3 domain protein
bsdcttw_28160	COG1388	LysM domain
bsdcttw_28160	COG0791	NLP P60 protein
bsdcttw_28170	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
bsdcttw_28180	COG0778	Nitroreductase
bsdcttw_28210	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
bsdcttw_28220	COG1160	GTP binding
bsdcttw_28240	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
bsdcttw_28250	COG1496	oxidoreductase activity
bsdcttw_28260	COG0792	nuclease activity
bsdcttw_28270	COG2257	FlhB HrpN YscU SpaS Family
bsdcttw_28280	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
bsdcttw_28290	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
bsdcttw_28310	COG0335	large ribosomal subunit rRNA binding
bsdcttw_28320	COG0336	Belongs to the RNA methyltransferase TrmD family
bsdcttw_28330	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
bsdcttw_28350	COG0228	four-way junction DNA binding
bsdcttw_28360	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
bsdcttw_28390	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
bsdcttw_28420	COG0511	ligase activity, forming carbon-carbon bonds
bsdcttw_28440	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
bsdcttw_28490	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
bsdcttw_28500	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
bsdcttw_28510	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
bsdcttw_28520	COG0552	protein localization to endoplasmic reticulum
bsdcttw_28540	COG0571	ribonuclease III activity
bsdcttw_28550	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
bsdcttw_28560	COG0416	fatty acid biosynthetic process
bsdcttw_28570	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
bsdcttw_28580	COG0539	negative regulation of cytoplasmic translation
bsdcttw_28580	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
bsdcttw_28600	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
bsdcttw_28610	COG2081	HI0933 family
bsdcttw_28630	COG1058	Belongs to the CinA family
bsdcttw_28630	COG1546	Belongs to the CinA family
bsdcttw_28640	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
bsdcttw_28650	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
bsdcttw_28670	COG0523	cobalamin synthesis protein
bsdcttw_28700	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
bsdcttw_28710	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
bsdcttw_28720	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
bsdcttw_28730	COG1609	Transcriptional regulator
bsdcttw_28740	COG1904	glucuronate isomerase
bsdcttw_28750	COG1785	Belongs to the alkaline phosphatase family
bsdcttw_28820	COG0540	Belongs to the ATCase OTCase family
bsdcttw_28870	COG0395	ABC-type sugar transport system, permease component
bsdcttw_28920	COG0395	ABC-type sugar transport system, permease component
bsdcttw_28960	COG0514	ATP-dependent DNA helicase (RecQ)
bsdcttw_29010	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
bsdcttw_29020	COG2759	Belongs to the formate--tetrahydrofolate ligase family
bsdcttw_29040	COG0017	Asparaginyl-tRNA synthetase
bsdcttw_29060	COG0189	ligase activity
bsdcttw_29090	COG0740	serine-type endopeptidase activity
bsdcttw_29110	COG0612	Peptidase, M16
bsdcttw_29130	COG1185	polyribonucleotide nucleotidyltransferase activity
bsdcttw_29180	COG0697	spore germination
bsdcttw_29190	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
bsdcttw_29200	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
bsdcttw_29230	COG1686	Belongs to the peptidase S11 family
bsdcttw_29250	COG1136	(ABC) transporter
bsdcttw_29250	COG0577	efflux transmembrane transporter activity
bsdcttw_29260	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
bsdcttw_29290	COG0681	Belongs to the peptidase S26 family
bsdcttw_29300	COG0681	Belongs to the peptidase S26 family
bsdcttw_29310	COG1758	RNA polymerase activity
bsdcttw_29320	COG2052	Domain of unknown function (DUF370)
bsdcttw_29330	COG1561	YicC-like family, N-terminal region
bsdcttw_29350	COG1293	RNA-binding protein homologous to eukaryotic snRNP
bsdcttw_29360	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
bsdcttw_29370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
bsdcttw_29380	COG0482	sulfurtransferase activity
bsdcttw_29390	COG0822	iron-sulfur transferase activity
bsdcttw_29410	COG1959	2 iron, 2 sulfur cluster binding
bsdcttw_29420	COG2244	polysaccharide biosynthetic process
bsdcttw_29430	COG5001	Diguanylate cyclase
bsdcttw_29460	COG2207	Transcriptional regulator
bsdcttw_29460	COG4753	response regulator
bsdcttw_29470	COG2972	Histidine kinase
bsdcttw_29490	COG1175	transmembrane transport
bsdcttw_29500	COG1653	transport
bsdcttw_29510	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
bsdcttw_29520	COG1979	alcohol dehydrogenase
bsdcttw_29560	COG1064	alcohol dehydrogenase
bsdcttw_29570	COG2135	peptidase activity
bsdcttw_29590	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_29650	COG2267	carboxylic ester hydrolase activity
bsdcttw_29670	COG2207	Transcriptional regulator
bsdcttw_29680	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_29700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
bsdcttw_29730	COG3328	transposase activity
bsdcttw_29780	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
bsdcttw_29790	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
bsdcttw_29800	COG1187	pseudouridine synthase activity
bsdcttw_29820	COG1435	thymidine kinase activity
bsdcttw_29830	COG2323	membrane
bsdcttw_29840	COG1309	transcriptional regulator
bsdcttw_29850	COG2814	Major facilitator Superfamily
bsdcttw_29890	COG3250	beta-galactosidase activity
bsdcttw_29900	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
bsdcttw_29900	COG2207	Transcriptional regulator
bsdcttw_29910	COG0534	Mate efflux family protein
bsdcttw_29960	COG2207	Transcriptional regulator
bsdcttw_29960	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
bsdcttw_29990	COG0395	ABC-type sugar transport system, permease component
bsdcttw_30000	COG4209	transmembrane transport
bsdcttw_30010	COG1609	Transcriptional regulator
bsdcttw_30030	COG1137	ATPase activity
bsdcttw_30100	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
bsdcttw_30100	COG0493	'glutamate synthase
bsdcttw_30130	COG5002	protein histidine kinase activity
bsdcttw_30160	COG0488	(ABC) transporter
bsdcttw_30170	COG2246	polysaccharide biosynthetic process
bsdcttw_30250	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
bsdcttw_30270	COG1459	type II secretion system
bsdcttw_30290	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
bsdcttw_30300	COG1442	glycosyl transferase family 8
bsdcttw_30500	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
bsdcttw_30510	COG1982	Orn Lys Arg decarboxylase major
bsdcttw_30520	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
bsdcttw_30530	COG1136	(ABC) transporter
bsdcttw_30530	COG0577	efflux transmembrane transporter activity
bsdcttw_30540	COG1136	(ABC) transporter
bsdcttw_30540	COG0577	efflux transmembrane transporter activity
bsdcttw_30580	COG0826	peptidase U32
bsdcttw_30590	COG4122	O-methyltransferase activity
bsdcttw_30610	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
bsdcttw_30620	COG0735	belongs to the Fur family
bsdcttw_30640	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
bsdcttw_30650	COG4472	Bacterial protein of unknown function (DUF965)
bsdcttw_30660	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
bsdcttw_30690	COG0301	tRNA thio-modification
bsdcttw_30700	COG1104	cysteine desulfurase activity
bsdcttw_30710	COG1385	rRNA (uridine-N3-)-methyltransferase activity
bsdcttw_30720	COG2264	protein methyltransferase activity
bsdcttw_30730	COG0484	heat shock protein binding
bsdcttw_30740	COG0443	Heat shock 70 kDa protein
bsdcttw_30750	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
bsdcttw_30760	COG1420	regulation of RNA biosynthetic process
bsdcttw_30800	COG0641	radical SAM
bsdcttw_30870	COG0635	Involved in the biosynthesis of porphyrin-containing compound
bsdcttw_30880	COG2205	protein histidine kinase activity
bsdcttw_30910	COG0745	RESPONSE REGULATOR receiver
bsdcttw_30920	COG0481	GTPase activity
bsdcttw_30940	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
bsdcttw_30950	COG0268	Binds directly to 16S ribosomal RNA
bsdcttw_30960	COG0840	transmembrane signaling receptor activity
bsdcttw_30980	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
bsdcttw_30990	COG4932	domain protein
bsdcttw_30990	COG5492	domain, Protein
bsdcttw_31000	COG0484	heat shock protein binding
bsdcttw_31010	COG3458	cephalosporin-C deacetylase activity
bsdcttw_31060	COG3345	alpha-galactosidase
bsdcttw_31080	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
bsdcttw_31080	COG2207	Transcriptional regulator
bsdcttw_31090	COG3507	Belongs to the glycosyl hydrolase 43 family
bsdcttw_31110	COG2207	Transcriptional regulator
bsdcttw_31260	COG0477	Major facilitator Superfamily
bsdcttw_31290	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
bsdcttw_31290	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
bsdcttw_31300	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_31310	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
bsdcttw_31340	COG0667	Aldo Keto reductase
bsdcttw_31350	COG0038	chloride channel
bsdcttw_31360	COG0789	Transcriptional regulator
bsdcttw_31370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
bsdcttw_31390	COG0196	riboflavin kinase activity
bsdcttw_31400	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
bsdcttw_31420	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
bsdcttw_31430	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
bsdcttw_31430	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
bsdcttw_31440	COG1358	cellular component organization or biogenesis
bsdcttw_31450	COG2740	Nucleic-acid-binding protein implicated in transcription termination
bsdcttw_31460	COG0195	Participates in both transcription termination and antitermination
bsdcttw_31470	COG0779	Required for maturation of 30S ribosomal subunits
bsdcttw_31490	COG0131	Imidazoleglycerol-phosphate dehydratase
bsdcttw_31500	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
bsdcttw_31510	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
bsdcttw_31520	COG0124	histidyl-tRNA synthetase
bsdcttw_31530	COG3331	DNA recombination
bsdcttw_31540	COG0564	pseudouridine synthase activity
bsdcttw_31550	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_31560	COG1187	pseudouridine synthase activity
bsdcttw_31570	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
bsdcttw_31570	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
bsdcttw_31580	COG2357	RelA SpoT domain protein
bsdcttw_31590	COG0739	heme binding
bsdcttw_31610	COG1316	TRANSCRIPTIONal
bsdcttw_31620	COG2843	Capsule synthesis protein
bsdcttw_31630	COG2195	Cleaves the N-terminal amino acid of tripeptides
bsdcttw_31640	COG2848	UPF0210 protein
bsdcttw_31660	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
bsdcttw_31670	COG0849	cell division
bsdcttw_31680	COG0237	dephospho-CoA kinase activity
bsdcttw_31690	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
bsdcttw_31690	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
bsdcttw_31720	COG1027	Aspartate ammonia-lyase
bsdcttw_31730	COG1160	GTP binding
bsdcttw_31740	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
bsdcttw_31790	COG1191	sigma factor activity
bsdcttw_31810	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
bsdcttw_31820	COG1776	CheC inhibitor of MCP methylation
bsdcttw_31830	COG0835	chemotaxis
bsdcttw_31840	COG0643	Histidine kinase
bsdcttw_31840	COG2198	Histidine kinase
bsdcttw_31850	COG2201	protein-glutamate methylesterase activity
bsdcttw_31880	COG1419	protein localization to endoplasmic reticulum
bsdcttw_31890	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
bsdcttw_31900	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
bsdcttw_31910	COG4791	protein targeting
bsdcttw_31920	COG1987	bacterial-type flagellum assembly
bsdcttw_31930	COG1338	Plays a role in the flagellum-specific transport system
bsdcttw_31950	COG2201	protein-glutamate methylesterase activity
bsdcttw_31960	COG1776	CheC inhibitor of MCP methylation
bsdcttw_31960	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
bsdcttw_31970	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
bsdcttw_31990	COG1582	Flagellar protein (FlbD)
bsdcttw_32020	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
bsdcttw_32060	COG1157	protein secretion by the type III secretion system
bsdcttw_32080	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
bsdcttw_32100	COG1677	Flagellar hook-basal body complex protein FliE
bsdcttw_32110	COG1558	bacterial-type flagellum-dependent cell motility
bsdcttw_32120	COG1815	bacterial-type flagellum-dependent cell motility
bsdcttw_32150	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
bsdcttw_32160	COG0758	DNA mediated transformation
bsdcttw_32170	COG0606	chelatase, subunit chli
bsdcttw_32180	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
bsdcttw_32200	COG0658	competence protein
bsdcttw_32200	COG2333	competence protein COMEC
bsdcttw_32210	COG1191	sigma factor activity
bsdcttw_32220	COG1191	sigma factor activity
bsdcttw_32240	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
bsdcttw_32260	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
bsdcttw_32270	COG0772	Belongs to the SEDS family
bsdcttw_32280	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
bsdcttw_32310	COG0768	penicillin binding
bsdcttw_32330	COG0275	rRNA processing
bsdcttw_32340	COG2001	Belongs to the MraZ family
bsdcttw_32350	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
bsdcttw_32360	COG0012	GTP binding
bsdcttw_32380	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
bsdcttw_32400	COG0515	serine threonine protein kinase
bsdcttw_32400	COG2815	serine threonine protein kinase
bsdcttw_32410	COG0631	protein serine/threonine phosphatase activity
bsdcttw_32420	COG0820	rRNA (adenine-C2-)-methyltransferase activity
bsdcttw_32430	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
bsdcttw_32430	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
bsdcttw_32440	COG2738	Putative neutral zinc metallopeptidase
bsdcttw_32450	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
bsdcttw_32460	COG0242	peptide deformylase activity
bsdcttw_32470	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
bsdcttw_32480	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
bsdcttw_32540	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
bsdcttw_32560	COG4974	Belongs to the 'phage' integrase family
bsdcttw_32580	COG0494	nUDIX hydrolase
bsdcttw_32590	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
bsdcttw_32600	COG1418	mRNA catabolic process
bsdcttw_32610	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
bsdcttw_32630	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
bsdcttw_32640	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
bsdcttw_32660	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
bsdcttw_32670	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
bsdcttw_32680	COG2081	HI0933 family
bsdcttw_32700	COG2201	protein-glutamate methylesterase activity
bsdcttw_32710	COG0495	leucyl-tRNA aminoacylation
bsdcttw_32720	COG0463	Glycosyl transferase, family 2
bsdcttw_32740	COG2244	polysaccharide biosynthetic process
bsdcttw_32760	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
bsdcttw_32780	COG1702	phosphate starvation-inducible protein PhoH
bsdcttw_32810	COG0828	Belongs to the bacterial ribosomal protein bS21 family
bsdcttw_32820	COG0840	transmembrane signaling receptor activity
bsdcttw_32820	COG5278	phosphoserine phosphatase activity
bsdcttw_32830	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
bsdcttw_32890	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
bsdcttw_32920	COG0750	zinc metalloprotease
bsdcttw_32930	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
bsdcttw_32940	COG4589	Belongs to the CDS family
bsdcttw_32960	COG0233	cytoplasmic translational termination
bsdcttw_33010	COG0628	permease
bsdcttw_33020	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
bsdcttw_33030	COG0052	Belongs to the universal ribosomal protein uS2 family
bsdcttw_33050	COG1051	belongs to the nudix hydrolase family
bsdcttw_33060	COG0768	penicillin binding
bsdcttw_33070	COG0772	Belongs to the SEDS family
bsdcttw_33080	COG0826	peptidase U32
bsdcttw_33100	COG2255	four-way junction helicase activity
bsdcttw_33110	COG0632	four-way junction helicase activity
bsdcttw_33130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
bsdcttw_33170	COG0333	Belongs to the bacterial ribosomal protein bL32 family
bsdcttw_33190	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
bsdcttw_33200	COG0280	phosphate acetyltransferase
bsdcttw_33240	COG3279	Response regulator of the LytR AlgR family
bsdcttw_33250	COG1323	Belongs to the UPF0348 family
bsdcttw_33260	COG1164	Oligoendopeptidase f
bsdcttw_33270	COG3314	Sporulation integral membrane protein YlbJ
bsdcttw_33290	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
bsdcttw_33300	COG0742	ribosomal rna small subunit methyltransferase
bsdcttw_33330	COG0463	Glycosyl transferase, family 2
bsdcttw_33340	COG0562	UDP-galactopyranose mutase
bsdcttw_33350	COG0464	growth
bsdcttw_33360	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
bsdcttw_33370	COG1461	Dihydroxyacetone kinase
bsdcttw_33380	COG1302	Protein conserved in bacteria
bsdcttw_33400	COG0227	Belongs to the bacterial ribosomal protein bL28 family
bsdcttw_33420	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_33430	COG0383	alpha-mannosidase activity
bsdcttw_33450	COG0395	ABC-type sugar transport system, permease component
bsdcttw_33460	COG4209	transmembrane transport
bsdcttw_33470	COG1609	Transcriptional regulator
bsdcttw_33480	COG1472	Belongs to the glycosyl hydrolase 3 family
bsdcttw_33570	COG0860	N-Acetylmuramoyl-L-alanine amidase
bsdcttw_33570	COG1388	LysM domain
bsdcttw_33590	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
bsdcttw_33620	COG1131	(ABC) transporter
bsdcttw_33660	COG0107	imidazoleglycerol-phosphate synthase activity
bsdcttw_33670	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
bsdcttw_33690	COG0784	Response regulator, receiver
bsdcttw_33690	COG0835	chemotaxis
bsdcttw_33740	COG2337	Toxic component of a toxin-antitoxin (TA) module
bsdcttw_33750	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
bsdcttw_33760	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
bsdcttw_33760	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
bsdcttw_33770	COG0736	holo-[acyl-carrier-protein] synthase activity
bsdcttw_33790	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
bsdcttw_33800	COG0488	(ABC) transporter
bsdcttw_33820	COG4213	ABC transporter substrate-binding protein
bsdcttw_33830	COG2207	Transcriptional regulator
bsdcttw_33840	COG2972	Histidine kinase
bsdcttw_33870	COG1172	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_33890	COG4213	ABC transporter substrate-binding protein
bsdcttw_33900	COG1802	Transcriptional regulator
bsdcttw_33910	COG0473	3-isopropylmalate dehydrogenase activity
bsdcttw_33920	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
bsdcttw_33930	COG0549	Belongs to the carbamate kinase family
bsdcttw_33940	COG0840	transmembrane signaling receptor activity
bsdcttw_33950	COG0367	asparagine synthase
bsdcttw_33960	COG0840	transmembrane signaling receptor activity
bsdcttw_33960	COG3290	protein histidine kinase activity
bsdcttw_33970	COG1464	Belongs to the NlpA lipoprotein family
bsdcttw_33980	COG2011	ABC-type metal ion transport system permease component
bsdcttw_33990	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
bsdcttw_34020	COG5001	Diguanylate cyclase
bsdcttw_34020	COG3300	MHYT domain
bsdcttw_34030	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
bsdcttw_34050	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
bsdcttw_34060	COG1802	Transcriptional regulator
bsdcttw_34070	COG0246	Mannitol dehydrogenase
bsdcttw_34080	COG1312	Catalyzes the dehydration of D-mannonate
bsdcttw_34170	COG0840	transmembrane signaling receptor activity
bsdcttw_34200	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
bsdcttw_34210	COG1404	Belongs to the peptidase S8 family
bsdcttw_34220	COG1592	Rubrerythrin
bsdcttw_34230	COG1013	pyruvate-flavodoxin oxidoreductase activity
bsdcttw_34240	COG0674	pyruvate-flavodoxin oxidoreductase activity
bsdcttw_34240	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
bsdcttw_34280	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
bsdcttw_34290	COG1268	BioY protein
bsdcttw_34300	COG1396	sequence-specific DNA binding
bsdcttw_34310	COG3842	ATPase activity
bsdcttw_34320	COG1176	ABC-type spermidine putrescine transport system, permease component I
bsdcttw_34330	COG1177	transmembrane transport
bsdcttw_34350	COG1846	Transcriptional regulator
bsdcttw_34350	COG0456	acetyltransferase
bsdcttw_34360	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
bsdcttw_34390	COG1854	S-ribosylhomocysteine lyase activity
bsdcttw_34420	COG1376	ErfK ybiS ycfS ynhG family protein
bsdcttw_34430	COG1132	(ABC) transporter
bsdcttw_34470	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_34480	COG0444	Belongs to the ABC transporter superfamily
bsdcttw_34490	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
bsdcttw_34500	COG0601	transmembrane transport
bsdcttw_34520	COG0148	phosphopyruvate hydratase activity
bsdcttw_34530	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
bsdcttw_34540	COG0165	Argininosuccinate lyase
bsdcttw_34550	COG1136	(ABC) transporter
bsdcttw_34600	COG0640	Transcriptional regulator
bsdcttw_34620	COG1131	(ABC) transporter
bsdcttw_34640	COG1937	Protein conserved in bacteria
bsdcttw_34680	COG4555	ABC transporter
bsdcttw_34690	COG0840	transmembrane signaling receptor activity
bsdcttw_34720	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_34730	COG1609	Transcriptional regulator
bsdcttw_34740	COG1554	hydrolase, family 65, central catalytic
bsdcttw_34760	COG0395	ABC-type sugar transport system, permease component
bsdcttw_34770	COG1175	transmembrane transport
bsdcttw_34790	COG1968	undecaprenyl-diphosphatase activity
bsdcttw_34860	COG2333	competence protein COMEC
bsdcttw_34860	COG0658	competence protein
bsdcttw_34880	COG5002	protein histidine kinase activity
bsdcttw_34920	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
bsdcttw_34930	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
bsdcttw_34940	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
bsdcttw_34950	COG0424	maF-like protein
bsdcttw_34960	COG0137	argininosuccinate synthase activity
bsdcttw_34990	COG0561	phosphatase activity
bsdcttw_35050	COG1609	Transcriptional regulator
bsdcttw_35070	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
bsdcttw_35100	COG1126	abc transporter atp-binding protein
bsdcttw_35110	COG0765	amino acid transport
bsdcttw_35120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
bsdcttw_35130	COG0588	phosphoglycerate mutase activity
bsdcttw_35160	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
bsdcttw_35220	COG5002	protein histidine kinase activity
bsdcttw_35230	COG0745	RESPONSE REGULATOR receiver
bsdcttw_35280	COG1584	GPR1 FUN34 yaaH family protein
bsdcttw_35360	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
bsdcttw_35370	COG0557	exoribonuclease II activity
bsdcttw_35390	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
bsdcttw_35400	COG0149	triose-phosphate isomerase activity
bsdcttw_35450	COG0297	glycogen (starch) synthase activity
bsdcttw_35460	COG0745	RESPONSE REGULATOR receiver
bsdcttw_35470	COG0750	zinc metalloprotease
bsdcttw_35480	COG0497	DNA recombination
bsdcttw_35540	COG0217	transcriptional regulatory protein
bsdcttw_35550	COG1438	arginine binding
bsdcttw_35560	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
bsdcttw_35570	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
bsdcttw_35580	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
bsdcttw_35600	COG1722	exodeoxyribonuclease VII activity
bsdcttw_35610	COG1570	exodeoxyribonuclease VII activity
bsdcttw_35620	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
bsdcttw_35650	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
bsdcttw_35660	COG1882	Formate acetyltransferase
bsdcttw_35740	COG3854	ATPases associated with a variety of cellular activities
bsdcttw_35760	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
bsdcttw_35780	COG0066	3-isopropylmalate dehydratase activity
bsdcttw_35790	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
bsdcttw_35800	COG0473	3-isopropylmalate dehydrogenase activity
bsdcttw_35810	COG0583	DNA-binding transcription factor activity
bsdcttw_35830	COG1194	a g-specific adenine glycosylase
bsdcttw_35840	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
bsdcttw_35880	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
bsdcttw_35890	COG1605	Chorismate mutase
bsdcttw_35890	COG0077	Prephenate dehydratase
bsdcttw_35910	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
bsdcttw_35920	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
bsdcttw_35950	COG0632	four-way junction helicase activity
bsdcttw_35980	COG1131	(ABC) transporter
bsdcttw_35990	COG4585	Histidine kinase
bsdcttw_36000	COG2197	response regulator
bsdcttw_36020	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_36030	COG0444	Belongs to the ABC transporter superfamily
bsdcttw_36050	COG0601	transmembrane transport
bsdcttw_36080	COG3858	chitin binding
bsdcttw_36080	COG1388	LysM domain
bsdcttw_36090	COG1307	EDD domain protein, DegV family
bsdcttw_36100	COG1116	anion transmembrane transporter activity
bsdcttw_36140	COG1116	anion transmembrane transporter activity
bsdcttw_36150	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
bsdcttw_36180	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
bsdcttw_36180	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
bsdcttw_36190	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
bsdcttw_36310	COG1523	belongs to the glycosyl hydrolase 13 family
bsdcttw_36360	COG1131	(ABC) transporter
bsdcttw_36390	COG0488	(ABC) transporter
bsdcttw_36400	COG1012	belongs to the aldehyde dehydrogenase family
bsdcttw_36430	COG1177	transmembrane transport
bsdcttw_36440	COG1176	ABC-type spermidine putrescine transport system, permease component I
bsdcttw_36460	COG0347	Belongs to the P(II) protein family
bsdcttw_36470	COG1396	sequence-specific DNA binding
bsdcttw_36490	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
bsdcttw_36510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
bsdcttw_36520	COG0765	amino acid transport
bsdcttw_36530	COG1126	abc transporter atp-binding protein
bsdcttw_36570	COG4989	oxidoreductase activity
bsdcttw_36580	COG1253	flavin adenine dinucleotide binding
bsdcttw_36700	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
bsdcttw_36710	COG0167	dihydroorotate dehydrogenase activity
bsdcttw_36720	COG0543	2 iron, 2 sulfur cluster binding
bsdcttw_36750	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
bsdcttw_36760	COG0006	proline dipeptidase activity
bsdcttw_36800	COG0626	cystathionine gamma-synthase activity
bsdcttw_36810	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
bsdcttw_36830	COG0577	efflux transmembrane transporter activity
bsdcttw_36830	COG1136	(ABC) transporter
bsdcttw_36840	COG5002	protein histidine kinase activity
bsdcttw_36860	COG0284	orotidine-5'-phosphate decarboxylase activity
bsdcttw_36870	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
bsdcttw_36880	COG0494	nUDIX hydrolase
bsdcttw_36920	COG0673	inositol 2-dehydrogenase activity
bsdcttw_36930	COG0673	inositol 2-dehydrogenase activity
bsdcttw_36960	COG0463	Glycosyl transferase, family 2
bsdcttw_36960	COG0457	Tetratricopeptide repeat
bsdcttw_37040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
bsdcttw_37170	COG3708	Transcriptional regulator
bsdcttw_37170	COG2207	Transcriptional regulator
bsdcttw_37270	COG0582	viral genome integration into host DNA
bsdcttw_37300	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
bsdcttw_37310	COG0662	Cupin 2, conserved barrel domain protein
bsdcttw_37310	COG2207	Transcriptional regulator
bsdcttw_37320	COG0840	transmembrane signaling receptor activity
bsdcttw_37350	COG2207	Transcriptional regulator
bsdcttw_37350	COG3708	Transcriptional regulator
bsdcttw_37370	COG2207	Transcriptional regulator
bsdcttw_37370	COG3708	Transcriptional regulator
bsdcttw_37440	COG0656	L-ascorbic acid biosynthetic process
bsdcttw_37450	COG1205	dead DEAH box helicase
bsdcttw_37450	COG1111	helicase
bsdcttw_37530	COG0596	Alpha beta hydrolase
bsdcttw_37600	COG2801	Transposase and inactivated derivatives
bsdcttw_37630	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
bsdcttw_37670	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
bsdcttw_37680	COG0187	DNA topoisomerase II activity
bsdcttw_37810	COG2207	Transcriptional regulator
bsdcttw_37820	COG1132	(ABC) transporter
bsdcttw_37830	COG1132	(ABC) transporter
bsdcttw_37860	COG1162	GTPase activity
bsdcttw_37880	COG3706	GGDEF domain
bsdcttw_37890	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
bsdcttw_37900	COG2270	Major facilitator Superfamily
bsdcttw_38030	COG1132	(ABC) transporter
bsdcttw_38040	COG1132	(ABC) transporter
bsdcttw_38060	COG3620	sequence-specific DNA binding
bsdcttw_38070	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
bsdcttw_38090	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
bsdcttw_38090	COG2755	lipolytic protein G-D-S-L family
bsdcttw_38100	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
bsdcttw_38110	COG1162	GTPase activity
bsdcttw_38180	COG2972	Histidine kinase
bsdcttw_38180	COG0745	RESPONSE REGULATOR receiver
bsdcttw_38190	COG0493	'glutamate synthase
bsdcttw_38220	COG2207	Transcriptional regulator
bsdcttw_38240	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
bsdcttw_38280	COG1132	(ABC) transporter
bsdcttw_38290	COG1132	(ABC) transporter
bsdcttw_38310	COG0484	heat shock protein binding
bsdcttw_38350	COG3973	AAA domain
bsdcttw_38420	COG1132	(ABC) transporter
bsdcttw_38430	COG1653	transport
bsdcttw_38440	COG0395	ABC-type sugar transport system, permease component
bsdcttw_38450	COG4209	transmembrane transport
bsdcttw_38510	COG3328	transposase activity
bsdcttw_38540	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
bsdcttw_38570	COG1216	Glycosyl transferase, family 2
bsdcttw_38570	COG1442	glycosyl transferase family 8
bsdcttw_38590	COG0438	transferase activity, transferring glycosyl groups
bsdcttw_38600	COG0463	Glycosyl transferase, family 2
bsdcttw_38600	COG1216	Glycosyl transferase, family 2
bsdcttw_38630	COG0438	transferase activity, transferring glycosyl groups
bsdcttw_38650	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
bsdcttw_38710	COG1216	Glycosyl transferase, family 2
bsdcttw_38730	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
bsdcttw_38740	COG3773	Cell wall hydrolase
bsdcttw_38770	COG1131	(ABC) transporter
bsdcttw_38830	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
bsdcttw_38840	COG0358	DNA primase activity
bsdcttw_38850	COG0232	Belongs to the dGTPase family. Type 2 subfamily
bsdcttw_38870	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
bsdcttw_38880	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
bsdcttw_38950	COG3778	Protein conserved in bacteria
bsdcttw_38960	COG3299	homolog of phage Mu protein gp47
bsdcttw_39120	COG5566	PFAM Mor transcription activator
bsdcttw_39130	COG2217	Heavy metal translocating P-type atpase
bsdcttw_39140	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
bsdcttw_39160	COG0215	cysteine-tRNA ligase activity
bsdcttw_39170	COG1045	serine acetyltransferase
bsdcttw_39190	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
bsdcttw_39200	COG0840	transmembrane signaling receptor activity
bsdcttw_39210	COG0295	cytidine deaminase activity
bsdcttw_39220	COG2723	6-phospho-beta-galactosidase activity
bsdcttw_39230	COG0395	ABC-type sugar transport system, permease component
bsdcttw_39240	COG4209	transmembrane transport
bsdcttw_39260	COG2207	Transcriptional regulator
bsdcttw_39290	COG1959	2 iron, 2 sulfur cluster binding
bsdcttw_39300	COG2873	o-acetylhomoserine
bsdcttw_39340	COG0488	(ABC) transporter
bsdcttw_39350	COG3409	Peptidoglycan-binding domain 1 protein
bsdcttw_39350	COG3773	Cell wall hydrolase
bsdcttw_39370	COG1091	dTDP-4-dehydrorhamnose reductase activity
bsdcttw_39410	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_39420	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
bsdcttw_39440	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
bsdcttw_39480	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
bsdcttw_39500	COG1263	PTS System
bsdcttw_39500	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
bsdcttw_39510	COG2190	(PTS) system
bsdcttw_39510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
bsdcttw_39510	COG1263	PTS System
bsdcttw_39520	COG3711	transcriptional antiterminator
bsdcttw_39530	COG0534	Mate efflux family protein
bsdcttw_39550	COG1695	Transcriptional regulator
bsdcttw_39560	COG2195	Cleaves the N-terminal amino acid of tripeptides
bsdcttw_39570	COG1027	Aspartate ammonia-lyase
bsdcttw_39580	COG1522	sequence-specific DNA binding
bsdcttw_39590	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
bsdcttw_39590	COG2199	diguanylate cyclase activity
bsdcttw_39600	COG3870	Protein conserved in bacteria
bsdcttw_39620	COG1668	transmembrane transport
bsdcttw_39630	COG4152	abc transporter atp-binding protein
bsdcttw_39640	COG0531	amino acid
bsdcttw_39670	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
bsdcttw_39690	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
bsdcttw_39700	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
bsdcttw_39720	COG1136	(ABC) transporter
bsdcttw_39730	COG4591	ABC-type transport system involved in lipoprotein release permease component
bsdcttw_39780	COG0395	ABC-type sugar transport system, permease component
bsdcttw_39790	COG4209	transmembrane transport
bsdcttw_39840	COG1126	abc transporter atp-binding protein
bsdcttw_39850	COG0765	amino acid transport
bsdcttw_39870	COG0318	PFAM AMP-dependent synthetase and ligase
bsdcttw_39890	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
bsdcttw_39910	COG1051	belongs to the nudix hydrolase family
bsdcttw_39920	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
bsdcttw_39960	COG1175	transmembrane transport
bsdcttw_39970	COG0395	ABC-type sugar transport system, permease component
bsdcttw_40000	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
bsdcttw_40000	COG0456	acetyltransferase
bsdcttw_40010	COG1201	RNA secondary structure unwinding
bsdcttw_40020	COG0840	transmembrane signaling receptor activity
bsdcttw_40040	COG0778	Nitroreductase
bsdcttw_40050	COG0395	ABC-type sugar transport system, permease component
bsdcttw_40060	COG4209	transmembrane transport
bsdcttw_40100	COG3250	beta-galactosidase activity
bsdcttw_40120	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
bsdcttw_40130	COG0508	dehydrogenase complex catalyzes the overall conversion of
bsdcttw_40130	COG0596	Alpha beta hydrolase
bsdcttw_40150	COG1846	Transcriptional regulator
bsdcttw_40170	COG1609	Transcriptional regulator
bsdcttw_40170	COG2207	Transcriptional regulator
bsdcttw_40210	COG1609	Transcriptional regulator
bsdcttw_40260	COG0395	ABC-type sugar transport system, permease component
bsdcttw_40270	COG4209	transmembrane transport
bsdcttw_40280	COG0667	Aldo Keto reductase
bsdcttw_40320	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
bsdcttw_40330	COG0191	fructose-bisphosphate aldolase activity
bsdcttw_40370	COG1349	DNA-binding transcription factor activity
bsdcttw_40400	COG0583	DNA-binding transcription factor activity
bsdcttw_40430	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
bsdcttw_40440	COG0383	alpha-mannosidase activity
bsdcttw_40470	COG0395	ABC-type sugar transport system, permease component
bsdcttw_40480	COG4209	transmembrane transport
bsdcttw_40490	COG4753	response regulator
bsdcttw_40490	COG2207	Transcriptional regulator
bsdcttw_40500	COG2972	Histidine kinase
bsdcttw_40510	COG1609	Transcriptional regulator
bsdcttw_40540	COG0737	Belongs to the 5'-nucleotidase family
bsdcttw_40550	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
bsdcttw_40560	COG0113	porphobilinogen synthase activity
bsdcttw_40580	COG0181	hydroxymethylbilane synthase activity
bsdcttw_40590	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
bsdcttw_40590	COG1648	precorrin-2 dehydrogenase activity
bsdcttw_40600	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
bsdcttw_40610	COG2207	Transcriptional regulator
bsdcttw_40610	COG3708	Transcriptional regulator
bsdcttw_40630	COG0534	Mate efflux family protein
bsdcttw_40650	COG0789	Transcriptional regulator
bsdcttw_40700	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
bsdcttw_40720	COG2207	Transcriptional regulator
bsdcttw_40720	COG3708	Transcriptional regulator
bsdcttw_40790	COG5002	protein histidine kinase activity
bsdcttw_40890	COG1131	(ABC) transporter
bsdcttw_40900	COG1309	transcriptional regulator
bsdcttw_40930	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
bsdcttw_40940	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
bsdcttw_40990	COG1501	Belongs to the glycosyl hydrolase 31 family
bsdcttw_41000	COG2207	Transcriptional regulator
bsdcttw_41000	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_41020	COG4753	response regulator
bsdcttw_41020	COG2207	Transcriptional regulator
bsdcttw_41030	COG2972	Histidine kinase
bsdcttw_41090	COG1619	proteins homologs of microcin C7 resistance protein MccF
bsdcttw_41120	COG1309	transcriptional regulator
bsdcttw_41130	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_41160	COG0789	Transcriptional regulator
bsdcttw_41170	COG0673	inositol 2-dehydrogenase activity
bsdcttw_41180	COG0673	inositol 2-dehydrogenase activity
bsdcttw_41190	COG1882	Formate acetyltransferase
bsdcttw_41210	COG2169	Transcriptional regulator
bsdcttw_41210	COG1917	Cupin 2, conserved barrel domain protein
bsdcttw_41260	COG2207	Transcriptional regulator
bsdcttw_41260	COG3708	Transcriptional regulator
bsdcttw_41290	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
bsdcttw_41290	COG0574	Belongs to the PEP-utilizing enzyme family
bsdcttw_41300	COG0423	glycine-tRNA ligase activity
bsdcttw_41320	COG1381	Involved in DNA repair and RecF pathway recombination
bsdcttw_41340	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
bsdcttw_41380	COG1597	lipid kinase activity
bsdcttw_41430	COG3906	Belongs to the UPF0473 family
bsdcttw_41440	COG0210	DNA helicase
bsdcttw_41450	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
bsdcttw_41460	COG0667	Aldo Keto reductase
bsdcttw_41490	COG0714	Associated with various cellular activities
bsdcttw_41530	COG0577	efflux transmembrane transporter activity
bsdcttw_41560	COG1136	(ABC) transporter
bsdcttw_41570	COG0628	permease
bsdcttw_41600	COG0714	Associated with various cellular activities
bsdcttw_41610	COG1392	Phosphate transport regulator
bsdcttw_41620	COG0306	phosphate transporter
bsdcttw_41630	COG2205	protein histidine kinase activity
bsdcttw_41640	COG0745	RESPONSE REGULATOR receiver
bsdcttw_41740	COG2207	Transcriptional regulator
bsdcttw_41740	COG3708	Transcriptional regulator
bsdcttw_41780	COG5566	PFAM Mor transcription activator
bsdcttw_41800	COG1175	transmembrane transport
bsdcttw_41820	COG1609	Transcriptional regulator
bsdcttw_41850	COG2814	Major facilitator Superfamily
bsdcttw_41870	COG0583	DNA-binding transcription factor activity
bsdcttw_41890	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
bsdcttw_41900	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
bsdcttw_41930	COG1078	dGTPase activity
bsdcttw_41980	COG2205	protein histidine kinase activity
bsdcttw_42050	COG0395	ABC-type sugar transport system, permease component
bsdcttw_42060	COG4209	transmembrane transport
bsdcttw_42070	COG2972	Histidine kinase
bsdcttw_42080	COG3279	Response regulator of the LytR AlgR family
bsdcttw_42090	COG1309	transcriptional regulator
bsdcttw_42110	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
bsdcttw_42170	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
bsdcttw_42190	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
bsdcttw_42210	COG0438	transferase activity, transferring glycosyl groups
bsdcttw_42230	COG2703	oxygen carrier activity
bsdcttw_42240	COG1489	DNA binding
bsdcttw_42290	COG1132	(ABC) transporter
bsdcttw_42330	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
bsdcttw_42340	COG1481	regulation of sporulation
bsdcttw_42350	COG1660	Displays ATPase and GTPase activities
bsdcttw_42360	COG0812	UDP-N-acetylmuramate dehydrogenase activity
bsdcttw_42370	COG1940	carbohydrate kinase activity
bsdcttw_42380	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
bsdcttw_42390	COG0322	excinuclease ABC activity
bsdcttw_42400	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
bsdcttw_42410	COG0504	CTP synthase activity
bsdcttw_42420	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
bsdcttw_42430	COG0457	Tetratricopeptide repeat
bsdcttw_42430	COG0463	Glycosyl transferase, family 2
bsdcttw_42450	COG0438	transferase activity, transferring glycosyl groups
bsdcttw_42530	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
bsdcttw_42550	COG3475	LICD family
bsdcttw_42560	COG1063	alcohol dehydrogenase
bsdcttw_42590	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
bsdcttw_42610	COG0463	Glycosyl transferase, family 2
bsdcttw_42620	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
bsdcttw_42650	COG4641	Protein conserved in bacteria
bsdcttw_42650	COG1388	LysM domain
bsdcttw_42660	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
bsdcttw_42680	COG1516	flagellar protein fliS
bsdcttw_42690	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
bsdcttw_42700	COG1334	flagellar protein FlaG
bsdcttw_42710	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
bsdcttw_42720	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
bsdcttw_42730	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
bsdcttw_42750	COG4786	Flagellar basal body rod
bsdcttw_42750	COG1256	bacterial-type flagellum assembly
bsdcttw_42800	COG1378	Sugar-specific transcriptional regulator TrmB
bsdcttw_42810	COG0187	DNA topoisomerase II activity
bsdcttw_42820	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
bsdcttw_42830	COG1079	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_42840	COG4603	Belongs to the binding-protein-dependent transport system permease family
bsdcttw_42850	COG3845	ABC transporter
bsdcttw_42860	COG1744	ABC transporter substrate-binding protein PnrA-like
bsdcttw_42870	COG0813	purine-nucleoside phosphorylase activity
bsdcttw_42900	COG1349	DNA-binding transcription factor activity
bsdcttw_42920	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
bsdcttw_42970	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
bsdcttw_43010	COG0739	heme binding
bsdcttw_43010	COG1196	nuclear chromosome segregation
bsdcttw_43010	COG0741	lytic transglycosylase activity
bsdcttw_43020	COG2177	Part of the ABC transporter FtsEX involved in
bsdcttw_43030	COG2884	Cell division ATP-binding protein ftsE
bsdcttw_43040	COG2508	Transcriptional regulator
bsdcttw_43050	COG3842	ATPase activity
bsdcttw_43060	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
bsdcttw_43120	COG0395	ABC-type sugar transport system, permease component
bsdcttw_43130	COG1175	transmembrane transport
bsdcttw_43160	COG0423	glycine-tRNA ligase activity
bsdcttw_43200	COG2801	Transposase and inactivated derivatives
bsdcttw_43210	COG1028	Short-chain dehydrogenase reductase Sdr
bsdcttw_43220	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
bsdcttw_43240	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
bsdcttw_43240	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
bsdcttw_43240	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
bsdcttw_43250	COG1105	Belongs to the carbohydrate kinase PfkB family
bsdcttw_43260	COG1349	DNA-binding transcription factor activity
bsdcttw_43300	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
bsdcttw_43320	COG0440	acetolactate synthase activity
bsdcttw_43330	COG0028	Belongs to the TPP enzyme family
bsdcttw_43340	COG2207	Transcriptional regulator
bsdcttw_43340	COG3708	Transcriptional regulator
bsdcttw_43350	COG2365	Tyrosine phosphatase family
bsdcttw_43360	COG0488	(ABC) transporter
bsdcttw_43390	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
bsdcttw_43480	COG2378	regulation of single-species biofilm formation
bsdcttw_43600	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
bsdcttw_43690	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
bsdcttw_43700	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
bsdcttw_43720	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
bsdcttw_43730	COG1122	ATPase activity
bsdcttw_43740	COG1122	ATPase activity
bsdcttw_43760	COG0203	ribosomal protein L17
bsdcttw_43770	COG0202	RNA polymerase activity
bsdcttw_43780	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
bsdcttw_43790	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
bsdcttw_43800	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
bsdcttw_43810	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
bsdcttw_43840	COG0563	adenylate kinase activity
bsdcttw_43850	COG0201	protein transport
bsdcttw_43860	COG0200	Binds to the 23S rRNA
bsdcttw_43870	COG1841	ribosomal large subunit assembly
bsdcttw_43880	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
bsdcttw_43890	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
bsdcttw_43900	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
bsdcttw_43910	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
bsdcttw_43920	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
bsdcttw_43930	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
bsdcttw_43940	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
bsdcttw_43950	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
bsdcttw_43960	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
bsdcttw_43970	COG0255	Belongs to the universal ribosomal protein uL29 family
bsdcttw_43980	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
bsdcttw_43990	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
bsdcttw_44000	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
bsdcttw_44010	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
bsdcttw_44020	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
bsdcttw_44030	COG0089	rRNA binding
bsdcttw_44040	COG0088	Forms part of the polypeptide exit tunnel
bsdcttw_44050	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
bsdcttw_44060	COG0051	transcription antitermination factor activity, RNA binding
bsdcttw_44090	COG3279	Response regulator of the LytR AlgR family
bsdcttw_44100	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
bsdcttw_44100	COG0116	Belongs to the methyltransferase superfamily
bsdcttw_44110	COG1609	Transcriptional regulator
bsdcttw_44130	COG1842	Phage shock protein A
bsdcttw_44140	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
bsdcttw_44160	COG4260	virion core protein, lumpy skin disease virus
bsdcttw_44170	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
bsdcttw_44180	COG2152	Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man- Glc) to mannose 1-phosphate (Man1P) and glucose
bsdcttw_44200	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
bsdcttw_44220	COG1342	Belongs to the UPF0251 family
bsdcttw_44250	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
bsdcttw_44270	COG2816	NAD+ diphosphatase activity
bsdcttw_44290	COG3546	catalase activity
bsdcttw_44430	COG3299	homolog of phage Mu protein gp47
bsdcttw_44440	COG3628	GPW Gp25 family protein
bsdcttw_44470	COG1652	LysM domain
bsdcttw_44760	COG0328	RNA-DNA hybrid ribonuclease activity
bsdcttw_44790	COG2002	toxin-antitoxin pair type II binding
bsdcttw_44880	COG1193	negative regulation of DNA recombination
bsdcttw_44890	COG5002	protein histidine kinase activity
bsdcttw_44900	COG0745	RESPONSE REGULATOR receiver
bsdcttw_44960	COG0673	inositol 2-dehydrogenase activity
bsdcttw_44970	COG2746	aminoglycoside 3-N-acetyltransferase activity
bsdcttw_44980	COG0445	tRNA wobble uridine modification
bsdcttw_44990	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
bsdcttw_45000	COG1796	DNA polymerase
bsdcttw_45000	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
bsdcttw_45040	COG0395	ABC-type sugar transport system, permease component
bsdcttw_45090	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
bsdcttw_45130	COG4584	PFAM Integrase catalytic
bsdcttw_45140	COG4584	PFAM Integrase catalytic
bsdcttw_45180	COG0488	(ABC) transporter
bsdcttw_45190	COG0488	(ABC) transporter
bsdcttw_45200	COG0488	(ABC) transporter
bsdcttw_45210	COG0673	inositol 2-dehydrogenase activity
bsdcttw_45250	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
bsdcttw_45290	COG0613	PHP domain protein
bsdcttw_45520	COG2207	Transcriptional regulator
bsdcttw_45550	COG1131	(ABC) transporter
bsdcttw_45560	COG0641	radical SAM
bsdcttw_45580	COG3119	arylsulfatase activity
bsdcttw_45590	COG2197	response regulator
bsdcttw_45620	COG1131	(ABC) transporter
bsdcttw_45640	COG2207	Transcriptional regulator
bsdcttw_45640	COG3708	Transcriptional regulator
bsdcttw_45650	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
bsdcttw_45680	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
bsdcttw_45720	COG0395	ABC-type sugar transport system, permease component
bsdcttw_45730	COG4209	transmembrane transport
bsdcttw_45740	COG0673	inositol 2-dehydrogenase activity
bsdcttw_45790	COG1609	Transcriptional regulator
bsdcttw_45800	COG2972	Histidine kinase
bsdcttw_45800	COG0745	RESPONSE REGULATOR receiver
bsdcttw_45810	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
bsdcttw_45820	COG2814	Major facilitator Superfamily
bsdcttw_45830	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
bsdcttw_45830	COG2207	Transcriptional regulator
bsdcttw_45840	COG0018	arginyl-trna synthetase
bsdcttw_45850	COG0745	RESPONSE REGULATOR receiver
bsdcttw_45860	COG0642	Histidine kinase
bsdcttw_45860	COG5002	protein histidine kinase activity
bsdcttw_45880	COG0019	diaminopimelate decarboxylase activity
bsdcttw_45900	COG1696	Membrane protein involved in D-alanine export
bsdcttw_45940	COG3655	Transcriptional regulator
bsdcttw_45960	COG3655	Transcriptional regulator
bsdcttw_45970	COG0644	oxidoreductase
bsdcttw_46020	COG5002	protein histidine kinase activity
bsdcttw_46030	COG0745	RESPONSE REGULATOR receiver
bsdcttw_46070	COG4716	Myosin-crossreactive antigen
bsdcttw_46080	COG4221	oxidoreductase activity
bsdcttw_46090	COG1846	Transcriptional regulator
bsdcttw_46130	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
bsdcttw_46160	COG3708	Transcriptional regulator
bsdcttw_46160	COG2207	Transcriptional regulator
bsdcttw_46310	COG4824	toxin secretion phage lysis holin
bsdcttw_46480	COG3728	DNA packaging
bsdcttw_46480	COG5484	DNA packaging
bsdcttw_46820	COG3561	AntA/AntB antirepressor
bsdcttw_46890	COG0582	viral genome integration into host DNA
bsdcttw_46900	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
bsdcttw_46910	COG3481	metal-dependent phosphohydrolase, HD sub domain
bsdcttw_46930	COG1193	negative regulation of DNA recombination
bsdcttw_46940	COG0745	RESPONSE REGULATOR receiver
bsdcttw_46950	COG5002	protein histidine kinase activity
bsdcttw_46970	COG0436	Aminotransferase
bsdcttw_46980	COG1522	sequence-specific DNA binding
bsdcttw_47000	COG2720	vancomycin resistance protein
bsdcttw_47010	COG2176	DNA-directed DNA polymerase activity
bsdcttw_47020	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
bsdcttw_47030	COG1032	radical SAM domain protein
bsdcttw_47060	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
bsdcttw_47070	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
bsdcttw_47080	COG0037	tRNA processing
bsdcttw_47090	COG2208	phosphoserine phosphatase activity
bsdcttw_47130	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
bsdcttw_47140	COG0776	regulation of translation
bsdcttw_47150	COG3956	TIGRFAM MazG family protein
bsdcttw_47170	COG2002	toxin-antitoxin pair type II binding
bsdcttw_47180	COG0101	tRNA pseudouridine synthase activity
bsdcttw_47190	COG0671	phosphoesterase, PA-phosphatase related
bsdcttw_47200	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
bsdcttw_47210	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
bsdcttw_47220	COG0193	aminoacyl-tRNA hydrolase activity
bsdcttw_47260	COG2088	sporulation resulting in formation of a cellular spore
bsdcttw_47270	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
bsdcttw_47280	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
bsdcttw_47300	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
bsdcttw_47330	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
bsdcttw_47350	COG0789	Transcriptional regulator
bsdcttw_47360	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
bsdcttw_47370	COG4717	serine-type aminopeptidase activity
bsdcttw_47410	COG0840	transmembrane signaling receptor activity
bsdcttw_47430	COG1705	Flagellar rod assembly protein muramidase FlgJ
bsdcttw_47500	COG3299	homolog of phage Mu protein gp47
bsdcttw_47510	COG3628	GPW Gp25 family protein
bsdcttw_47690	COG1846	Transcriptional regulator
bsdcttw_47740	COG1695	Transcriptional regulator
bsdcttw_47750	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
bsdcttw_47780	COG1116	anion transmembrane transporter activity
bsdcttw_47810	COG4129	membrane
bsdcttw_47830	COG0017	Asparaginyl-tRNA synthetase
bsdcttw_47840	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
bsdcttw_47850	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
bsdcttw_47980	COG4166	transmembrane transport
bsdcttw_47990	COG0601	transmembrane transport
bsdcttw_48000	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
bsdcttw_48010	COG0444	Belongs to the ABC transporter superfamily
bsdcttw_48020	COG4608	Belongs to the ABC transporter superfamily
bsdcttw_48030	COG2608	mercury ion transmembrane transporter activity
bsdcttw_48050	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
bsdcttw_48070	COG0395	ABC-type sugar transport system, permease component
bsdcttw_48080	COG4209	transmembrane transport
bsdcttw_48110	COG0584	glycerophosphoryl diester phosphodiesterase
bsdcttw_48120	COG0739	heme binding
bsdcttw_48130	COG0840	transmembrane signaling receptor activity
bsdcttw_48140	COG0058	SHG alpha-glucan phosphorylase activity
bsdcttw_48160	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
bsdcttw_48180	COG1335	isochorismatase
bsdcttw_48190	COG1733	regulation of RNA biosynthetic process
bsdcttw_48210	COG1876	peptidase activity
bsdcttw_48220	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
bsdcttw_48290	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
bsdcttw_48300	COG1181	Belongs to the D-alanine--D-alanine ligase family
bsdcttw_48320	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
bsdcttw_48350	COG4466	Protein conserved in bacteria
bsdcttw_48390	COG0617	tRNA 3'-terminal CCA addition
bsdcttw_48520	COG3279	Response regulator of the LytR AlgR family
bsdcttw_48530	COG1902	pentaerythritol trinitrate reductase activity
bsdcttw_48530	COG0446	pyridine nucleotide-disulphide oxidoreductase
bsdcttw_48590	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
bsdcttw_48610	COG0237	dephospho-CoA kinase activity
bsdcttw_48630	COG0745	RESPONSE REGULATOR receiver
bsdcttw_48640	COG5002	protein histidine kinase activity
bsdcttw_48650	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
bsdcttw_48670	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
bsdcttw_48740	COG0590	tRNA wobble adenosine to inosine editing
bsdcttw_48790	COG0488	(ABC) transporter
bsdcttw_48800	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
bsdcttw_48800	COG1328	CTP reductase activity
bsdcttw_48810	COG0602	queuosine metabolic process
bsdcttw_48830	COG0205	6-phosphofructokinase activity
bsdcttw_48840	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
bsdcttw_48850	COG0084	hydrolase, TatD family'
bsdcttw_48880	COG3546	catalase activity
bsdcttw_48930	COG2188	Transcriptional regulator
bsdcttw_48990	COG1131	(ABC) transporter
bsdcttw_49000	COG0700	Nucleoside recognition
bsdcttw_49010	COG2715	membrane protein required for spore maturation
bsdcttw_49020	COG2002	toxin-antitoxin pair type II binding
bsdcttw_49030	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
bsdcttw_49040	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
bsdcttw_49050	COG1774	PSP1 C-terminal conserved region
bsdcttw_49060	COG0470	DNA polymerase III
bsdcttw_49070	COG1728	Protein conserved in bacteria
bsdcttw_49080	COG0194	GDP metabolic process
bsdcttw_49090	COG1982	Orn Lys Arg decarboxylase major
bsdcttw_49120	COG0129	dihydroxy-acid dehydratase activity
bsdcttw_49130	COG1122	ATPase activity
bsdcttw_49160	COG0310	cobalt ion transport
bsdcttw_49170	COG1937	Protein conserved in bacteria
bsdcttw_49180	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
bsdcttw_49210	COG1091	dTDP-4-dehydrorhamnose reductase activity
bsdcttw_49250	COG4106	trans-aconitate 2-methyltransferase activity
bsdcttw_49270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
bsdcttw_49290	COG3118	belongs to the thioredoxin family
bsdcttw_49310	COG0220	tRNA (guanine-N7-)-methyltransferase activity
bsdcttw_49340	COG1269	ATP hydrolysis coupled proton transport
bsdcttw_49380	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
bsdcttw_49390	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
bsdcttw_49400	COG1394	ATPase activity, coupled to movement of substances
bsdcttw_49410	COG1686	Belongs to the peptidase S11 family
bsdcttw_49440	COG1454	alcohol dehydrogenase
bsdcttw_49440	COG1012	belongs to the aldehyde dehydrogenase family
bsdcttw_49460	COG1475	DNA binding
bsdcttw_49470	COG1192	Involved in chromosome partitioning
bsdcttw_49510	COG0357	Ribosomal RNA small subunit methyltransferase G
bsdcttw_49520	COG0445	tRNA wobble uridine modification
bsdcttw_49530	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
bsdcttw_49540	COG1847	R3H domain protein
bsdcttw_49550	COG0706	membrane insertase activity
bsdcttw_49560	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
bsdcttw_49570	COG0594	ribonuclease P activity
bsdcttw_49580	COG0230	Belongs to the bacterial ribosomal protein bL34 family