locus-tag class description A2cp1_0001 PF00308 Bacterial dnaA protein A2cp1_0001 PF08299 Bacterial dnaA protein helix-turn-helix A2cp1_0001 PF11638 DnaA N-terminal domain A2cp1_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain A2cp1_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain A2cp1_0002 PF02767 DNA polymerase III beta subunit, central domain A2cp1_0003 PF02463 RecF/RecN/SMC N terminal domain A2cp1_0004 PF00204 DNA gyrase B A2cp1_0004 PF00986 DNA gyrase B subunit, carboxyl terminus A2cp1_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0004 PF01751 Toprim domain A2cp1_0005 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A2cp1_0005 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A2cp1_0008 PF02665 Nitrate reductase gamma subunit A2cp1_0008 PF02754 Cysteine-rich domain A2cp1_0008 PF13183 4Fe-4S dicluster domain A2cp1_0011 PF18030 RimK PreATP-grasp domain A2cp1_0011 PF08443 RimK-like ATP-grasp domain A2cp1_0012 PF08264 Anticodon-binding domain of tRNA A2cp1_0012 PF00133 tRNA synthetases class I (I, L, M and V) A2cp1_0012 PF06827 Zinc finger found in FPG and IleRS A2cp1_0013 PF01252 Signal peptidase (SPase) II A2cp1_0014 PF01790 Prolipoprotein diacylglyceryl transferase A2cp1_0019 PF02796 Helix-turn-helix domain of resolvase A2cp1_0019 PF00239 Resolvase, N terminal domain A2cp1_0027 PF05717 IS66 Orf2 like protein A2cp1_0036 PF00989 PAS fold A2cp1_0036 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0036 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0039 PF03129 Anticodon binding domain A2cp1_0039 PF09180 Prolyl-tRNA synthetase, C-terminal A2cp1_0039 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A2cp1_0045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_0045 PF02203 Tar ligand binding domain homologue A2cp1_0045 PF00672 HAMP domain A2cp1_0046 PF00106 short chain dehydrogenase A2cp1_0049 PF00474 Sodium:solute symporter family A2cp1_0052 PF00501 AMP-binding enzyme A2cp1_0052 PF14535 AMP-binding enzyme C-terminal domain A2cp1_0054 PF00501 AMP-binding enzyme A2cp1_0054 PF14535 AMP-binding enzyme C-terminal domain A2cp1_0057 PF01515 Phosphate acetyl/butaryl transferase A2cp1_0058 PF00871 Acetokinase family A2cp1_0059 PF00392 Bacterial regulatory proteins, gntR family A2cp1_0059 PF00155 Aminotransferase class I and II A2cp1_0064 PF01012 Electron transfer flavoprotein domain A2cp1_0065 PF00766 Electron transfer flavoprotein FAD-binding domain A2cp1_0065 PF01012 Electron transfer flavoprotein domain A2cp1_0066 PF00753 Metallo-beta-lactamase superfamily A2cp1_0067 PF03741 Integral membrane protein TerC family A2cp1_0070 PF00860 Permease family A2cp1_0072 PF04675 DNA ligase N terminus A2cp1_0072 PF04679 ATP dependent DNA ligase C terminal region A2cp1_0072 PF01068 ATP dependent DNA ligase domain A2cp1_0073 PF00849 RNA pseudouridylate synthase A2cp1_0073 PF01479 S4 domain A2cp1_0074 PF17092 Penicillin-binding protein OB-like domain A2cp1_0074 PF00912 Transglycosylase A2cp1_0074 PF00905 Penicillin binding protein transpeptidase domain A2cp1_0075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_0075 PF13426 PAS domain A2cp1_0075 PF08447 PAS fold A2cp1_0077 PF02416 mttA/Hcf106 family A2cp1_0078 PF00902 Sec-independent protein translocase protein (TatC) A2cp1_0080 PF00108 Thiolase, N-terminal domain A2cp1_0080 PF02803 Thiolase, C-terminal domain A2cp1_0084 PF11842 Domain of unknown function (DUF3362) A2cp1_0084 PF04055 Radical SAM superfamily A2cp1_0084 PF08497 Radical SAM N-terminal A2cp1_0087 PF00202 Aminotransferase class-III A2cp1_0091 PF13180 PDZ domain A2cp1_0091 PF17820 PDZ domain A2cp1_0093 PF02581 Thiamine monophosphate synthase A2cp1_0094 PF07722 Peptidase C26 A2cp1_0095 PF08543 Phosphomethylpyrimidine kinase A2cp1_0095 PF03070 TENA/THI-4/PQQC family A2cp1_0095 PF02581 Thiamine monophosphate synthase A2cp1_0097 PF00772 DnaB-like helicase N terminal domain A2cp1_0097 PF03796 DnaB-like helicase C terminal domain A2cp1_0099 PF04172 LrgB-like family A2cp1_0100 PF03788 LrgA family A2cp1_0101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0101 PF03466 LysR substrate binding domain A2cp1_0102 PF00809 Pterin binding enzyme A2cp1_0102 PF02310 B12 binding domain A2cp1_0102 PF02607 B12 binding domain A2cp1_0102 PF02965 Vitamin B12 dependent methionine synthase, activation domain A2cp1_0102 PF02574 Homocysteine S-methyltransferase A2cp1_0107 PF05872 Bacterial protein of unknown function (DUF853) A2cp1_0108 PF18698 Histidine kinase sensor domain A2cp1_0108 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0108 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0108 PF00672 HAMP domain A2cp1_0111 PF00919 Uncharacterized protein family UPF0004 A2cp1_0111 PF04055 Radical SAM superfamily A2cp1_0111 PF18693 TRAM domain A2cp1_0112 PF04461 Protein of unknown function (DUF520) A2cp1_0113 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A2cp1_0113 PF12706 Beta-lactamase superfamily domain A2cp1_0113 PF17770 Ribonuclease J C-terminal domain A2cp1_0115 PF13361 UvrD-like helicase C-terminal domain A2cp1_0115 PF00580 UvrD/REP helicase N-terminal domain A2cp1_0116 PF00962 Adenosine/AMP deaminase A2cp1_0117 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A2cp1_0117 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A2cp1_0118 PF00483 Nucleotidyl transferase A2cp1_0119 PF00072 Response regulator receiver domain A2cp1_0119 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_0120 PF00675 Insulinase (Peptidase family M16) A2cp1_0120 PF05193 Peptidase M16 inactive domain A2cp1_0121 PF05193 Peptidase M16 inactive domain A2cp1_0124 PF02954 Bacterial regulatory protein, Fis family A2cp1_0124 PF00072 Response regulator receiver domain A2cp1_0124 PF00158 Sigma-54 interaction domain A2cp1_0125 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0125 PF00989 PAS fold A2cp1_0125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0132 PF00326 Prolyl oligopeptidase family A2cp1_0132 PF07676 WD40-like Beta Propeller Repeat A2cp1_0132 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A2cp1_0133 PF00069 Protein kinase domain A2cp1_0134 PF03948 Ribosomal protein L9, C-terminal domain A2cp1_0134 PF01281 Ribosomal protein L9, N-terminal domain A2cp1_0135 PF01084 Ribosomal protein S18 A2cp1_0136 PF01250 Ribosomal protein S6 A2cp1_0137 PF01195 Peptidyl-tRNA hydrolase A2cp1_0138 PF14693 Ribosomal protein TL5, C-terminal domain A2cp1_0138 PF01386 Ribosomal L25p family A2cp1_0139 PF14572 Phosphoribosyl synthetase-associated domain A2cp1_0139 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase A2cp1_0140 PF04026 SpoVG A2cp1_0141 PF00288 GHMP kinases N terminal domain A2cp1_0141 PF08544 GHMP kinases C terminal A2cp1_0145 PF00156 Phosphoribosyl transferase domain A2cp1_0150 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_0151 PF07690 Major Facilitator Superfamily A2cp1_0153 PF00534 Glycosyl transferases group 1 A2cp1_0153 PF08323 Starch synthase catalytic domain A2cp1_0162 PF00072 Response regulator receiver domain A2cp1_0164 PF02603 HPr Serine kinase N terminus A2cp1_0164 PF07475 HPr Serine kinase C-terminal domain A2cp1_0165 PF03668 P-loop ATPase protein family A2cp1_0166 PF03830 PTS system sorbose subfamily IIB component A2cp1_0166 PF03610 PTS system fructose IIA component A2cp1_0167 PF03830 PTS system sorbose subfamily IIB component A2cp1_0169 PF03613 PTS system mannose/fructose/sorbose family IID component A2cp1_0170 PF00381 PTS HPr component phosphorylation site A2cp1_0171 PF00391 PEP-utilising enzyme, mobile domain A2cp1_0171 PF02896 PEP-utilising enzyme, TIM barrel domain A2cp1_0171 PF05524 PEP-utilising enzyme, N-terminal A2cp1_0172 PF02772 S-adenosylmethionine synthetase, central domain A2cp1_0172 PF00438 S-adenosylmethionine synthetase, N-terminal domain A2cp1_0172 PF02773 S-adenosylmethionine synthetase, C-terminal domain A2cp1_0173 PF03551 Transcriptional regulator PadR-like family A2cp1_0173 PF13847 Methyltransferase domain A2cp1_0174 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A2cp1_0174 PF05221 S-adenosyl-L-homocysteine hydrolase A2cp1_0175 PF02673 Bacitracin resistance protein BacA A2cp1_0176 PF00293 NUDIX domain A2cp1_0177 PF01050 Mannose-6-phosphate isomerase A2cp1_0177 PF00483 Nucleotidyl transferase A2cp1_0178 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A2cp1_0178 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A2cp1_0178 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A2cp1_0178 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A2cp1_0179 PF00480 ROK family A2cp1_0191 PF01118 Semialdehyde dehydrogenase, NAD binding domain A2cp1_0191 PF02774 Semialdehyde dehydrogenase, dimerisation domain A2cp1_0192 PF00696 Amino acid kinase family A2cp1_0195 PF00072 Response regulator receiver domain A2cp1_0195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0195 PF09456 RcsC Alpha-Beta-Loop (ABL) A2cp1_0195 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0199 PF04958 Arginine N-succinyltransferase beta subunit A2cp1_0200 PF02580 D-Tyr-tRNA(Tyr) deacylase A2cp1_0201 PF01230 HIT domain A2cp1_0203 PF03328 HpcH/HpaI aldolase/citrate lyase family A2cp1_0204 PF07736 Chorismate mutase type I A2cp1_0206 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A2cp1_0207 PF18317 Shikimate 5'-dehydrogenase C-terminal domain A2cp1_0207 PF01488 Shikimate / quinate 5-dehydrogenase A2cp1_0207 PF08501 Shikimate dehydrogenase substrate binding domain A2cp1_0208 PF01264 Chorismate synthase A2cp1_0209 PF01202 Shikimate kinase A2cp1_0210 PF01761 3-dehydroquinate synthase A2cp1_0211 PF01220 Dehydroquinase class II A2cp1_0213 PF00210 Ferritin-like domain A2cp1_0218 PF01479 S4 domain A2cp1_0218 PF00849 RNA pseudouridylate synthase A2cp1_0224 PF01040 UbiA prenyltransferase family A2cp1_0224 PF02628 Cytochrome oxidase assembly protein A2cp1_0227 PF13167 GTP-binding GTPase N-terminal A2cp1_0227 PF01926 50S ribosome-binding GTPase A2cp1_0227 PF16360 GTP-binding GTPase Middle Region A2cp1_0230 PF07690 Major Facilitator Superfamily A2cp1_0235 PF00696 Amino acid kinase family A2cp1_0235 PF01472 PUA domain A2cp1_0236 PF00171 Aldehyde dehydrogenase family A2cp1_0238 PF08241 Methyltransferase domain A2cp1_0239 PF00892 EamA-like transporter family A2cp1_0240 PF00069 Protein kinase domain A2cp1_0240 PF14032 PknH-like extracellular domain A2cp1_0241 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A2cp1_0241 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A2cp1_0241 PF10371 Domain of unknown function A2cp1_0241 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_0241 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A2cp1_0243 PF01370 NAD dependent epimerase/dehydratase family A2cp1_0244 PF03808 Glycosyl transferase WecB/TagA/CpsF family A2cp1_0248 PF00873 AcrB/AcrD/AcrF family A2cp1_0250 PF00440 Bacterial regulatory proteins, tetR family A2cp1_0252 PF04545 Sigma-70, region 4 A2cp1_0252 PF04542 Sigma-70 region 2 A2cp1_0255 PF02590 Predicted SPOUT methyltransferase A2cp1_0256 PF01483 Proprotein convertase P-domain A2cp1_0256 PF00082 Subtilase family A2cp1_0257 PF06415 BPG-independent PGAM N-terminus (iPGM_N) A2cp1_0257 PF01676 Metalloenzyme superfamily A2cp1_0262 PF04994 TfoX C-terminal domain A2cp1_0262 PF04993 TfoX N-terminal domain A2cp1_0263 PF06969 HemN C-terminal domain A2cp1_0263 PF04055 Radical SAM superfamily A2cp1_0265 PF03169 OPT oligopeptide transporter protein A2cp1_0266 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0266 PF00072 Response regulator receiver domain A2cp1_0268 PF04452 RNA methyltransferase A2cp1_0271 PF01039 Carboxyl transferase domain A2cp1_0273 PF00313 'Cold-shock' DNA-binding domain A2cp1_0274 PF03060 Nitronate monooxygenase A2cp1_0276 PF01553 Acyltransferase A2cp1_0278 PF00672 HAMP domain A2cp1_0278 PF00989 PAS fold A2cp1_0278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0278 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0278 PF18698 Histidine kinase sensor domain A2cp1_0279 PF00289 Biotin carboxylase, N-terminal domain A2cp1_0279 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A2cp1_0279 PF02785 Biotin carboxylase C-terminal domain A2cp1_0280 PF00364 Biotin-requiring enzyme A2cp1_0280 PF00682 HMGL-like A2cp1_0280 PF02436 Conserved carboxylase domain A2cp1_0286 PF05683 Fumarase C-terminus A2cp1_0286 PF05681 Fumarate hydratase (Fumerase) A2cp1_0287 PF00849 RNA pseudouridylate synthase A2cp1_0288 PF02472 Biopolymer transport protein ExbD/TolR A2cp1_0289 PF02472 Biopolymer transport protein ExbD/TolR A2cp1_0290 PF01618 MotA/TolQ/ExbB proton channel family A2cp1_0292 PF00593 TonB dependent receptor A2cp1_0294 PF00889 Elongation factor TS A2cp1_0295 PF00318 Ribosomal protein S2 A2cp1_0298 PF01189 16S rRNA methyltransferase RsmB/F A2cp1_0298 PF01029 NusB family A2cp1_0299 PF06827 Zinc finger found in FPG and IleRS A2cp1_0299 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A2cp1_0299 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A2cp1_0300 PF01351 Ribonuclease HII A2cp1_0301 PF01743 Poly A polymerase head domain A2cp1_0301 PF12626 Polymerase A arginine-rich C-terminus A2cp1_0301 PF12627 Probable RNA and SrmB- binding site of polymerase A A2cp1_0302 PF00696 Amino acid kinase family A2cp1_0303 PF01765 Ribosome recycling factor A2cp1_0307 PF00795 Carbon-nitrogen hydrolase A2cp1_0307 PF02540 NAD synthase A2cp1_0311 PF02779 Transketolase, pyrimidine binding domain A2cp1_0311 PF00456 Transketolase, thiamine diphosphate binding domain A2cp1_0311 PF02780 Transketolase, C-terminal domain A2cp1_0313 PF17862 AAA+ lid domain A2cp1_0313 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_0313 PF01434 Peptidase family M41 A2cp1_0314 PF00300 Histidine phosphatase superfamily (branch 1) A2cp1_0315 PF00128 Alpha amylase, catalytic domain A2cp1_0316 PF02446 4-alpha-glucanotransferase A2cp1_0317 PF00749 tRNA synthetases class I (E and Q), catalytic domain A2cp1_0319 PF13188 PAS domain A2cp1_0319 PF08448 PAS fold A2cp1_0319 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0319 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0319 PF00072 Response regulator receiver domain A2cp1_0321 PF00175 Oxidoreductase NAD-binding domain A2cp1_0321 PF00111 2Fe-2S iron-sulfur cluster binding domain A2cp1_0321 PF00970 Oxidoreductase FAD-binding domain A2cp1_0323 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0323 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0323 PF00989 PAS fold A2cp1_0324 PF02954 Bacterial regulatory protein, Fis family A2cp1_0324 PF00072 Response regulator receiver domain A2cp1_0324 PF00158 Sigma-54 interaction domain A2cp1_0325 PF04306 Protein of unknown function (DUF456) A2cp1_0326 PF00704 Glycosyl hydrolases family 18 A2cp1_0326 PF00041 Fibronectin type III domain A2cp1_0332 PF01361 Tautomerase enzyme A2cp1_0333 PF17284 Spermidine synthase tetramerisation domain A2cp1_0334 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0334 PF03466 LysR substrate binding domain A2cp1_0335 PF00578 AhpC/TSA family A2cp1_0336 PF02627 Carboxymuconolactone decarboxylase family A2cp1_0338 PF00196 Bacterial regulatory proteins, luxR family A2cp1_0338 PF00072 Response regulator receiver domain A2cp1_0344 PF05547 Immune inhibitor A peptidase M6 A2cp1_0344 PF00801 PKD domain A2cp1_0347 PF01433 Peptidase family M1 domain A2cp1_0347 PF11838 ERAP1-like C-terminal domain A2cp1_0348 PF01641 SelR domain A2cp1_0349 PF00072 Response regulator receiver domain A2cp1_0349 PF02954 Bacterial regulatory protein, Fis family A2cp1_0349 PF00158 Sigma-54 interaction domain A2cp1_0351 PF01883 Iron-sulfur cluster assembly protein A2cp1_0355 PF08331 Domain of unknown function (DUF1730) A2cp1_0363 PF00593 TonB dependent receptor A2cp1_0363 PF07715 TonB-dependent Receptor Plug Domain A2cp1_0365 PF02954 Bacterial regulatory protein, Fis family A2cp1_0365 PF02830 V4R domain A2cp1_0365 PF06505 Activator of aromatic catabolism A2cp1_0365 PF00158 Sigma-54 interaction domain A2cp1_0367 PF00578 AhpC/TSA family A2cp1_0369 PF00672 HAMP domain A2cp1_0369 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_0369 PF02203 Tar ligand binding domain homologue A2cp1_0372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0372 PF03466 LysR substrate binding domain A2cp1_0376 PF00561 alpha/beta hydrolase fold A2cp1_0378 PF03601 Conserved hypothetical protein 698 A2cp1_0379 PF03466 LysR substrate binding domain A2cp1_0379 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0383 PF08281 Sigma-70, region 4 A2cp1_0383 PF12680 SnoaL-like domain A2cp1_0383 PF04542 Sigma-70 region 2 A2cp1_0385 PF00270 DEAD/DEAH box helicase A2cp1_0385 PF17191 RecG wedge domain A2cp1_0385 PF13749 Putative ATP-dependent DNA helicase recG C-terminal A2cp1_0387 PF00158 Sigma-54 interaction domain A2cp1_0387 PF06506 Propionate catabolism activator A2cp1_0387 PF02954 Bacterial regulatory protein, Fis family A2cp1_0388 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A2cp1_0388 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A2cp1_0388 PF00378 Enoyl-CoA hydratase/isomerase A2cp1_0389 PF02803 Thiolase, C-terminal domain A2cp1_0389 PF00108 Thiolase, N-terminal domain A2cp1_0390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_0390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_0390 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_0393 PF01634 ATP phosphoribosyltransferase A2cp1_0394 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) A2cp1_0395 PF17827 PrmC N-terminal domain A2cp1_0395 PF05175 Methyltransferase small domain A2cp1_0396 PF03462 PCRF domain A2cp1_0396 PF00472 RF-1 domain A2cp1_0399 PF01979 Amidohydrolase family A2cp1_0400 PF04055 Radical SAM superfamily A2cp1_0401 PF04055 Radical SAM superfamily A2cp1_0402 PF02441 Flavoprotein A2cp1_0403 PF01209 ubiE/COQ5 methyltransferase family A2cp1_0404 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase A2cp1_0406 PF05193 Peptidase M16 inactive domain A2cp1_0406 PF00675 Insulinase (Peptidase family M16) A2cp1_0407 PF00348 Polyprenyl synthetase A2cp1_0410 PF01416 tRNA pseudouridine synthase A2cp1_0411 PF01118 Semialdehyde dehydrogenase, NAD binding domain A2cp1_0411 PF02774 Semialdehyde dehydrogenase, dimerisation domain A2cp1_0414 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_0414 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_0414 PF07724 AAA domain (Cdc48 subfamily) A2cp1_0414 PF02861 Clp amino terminal domain, pathogenicity island component A2cp1_0414 PF17871 AAA lid domain A2cp1_0415 PF13180 PDZ domain A2cp1_0416 PF00195 Chalcone and stilbene synthases, N-terminal domain A2cp1_0416 PF02797 Chalcone and stilbene synthases, C-terminal domain A2cp1_0418 PF14535 AMP-binding enzyme C-terminal domain A2cp1_0418 PF00501 AMP-binding enzyme A2cp1_0419 PF01266 FAD dependent oxidoreductase A2cp1_0419 PF05430 S-adenosyl-L-methionine-dependent methyltransferase A2cp1_0420 PF03783 Curli production assembly/transport component CsgG A2cp1_0425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus A2cp1_0425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus A2cp1_0426 PF01432 Peptidase family M3 A2cp1_0430 PF00753 Metallo-beta-lactamase superfamily A2cp1_0430 PF12706 Beta-lactamase superfamily domain A2cp1_0431 PF17954 Quercetinase C-terminal cupin domain A2cp1_0431 PF02678 Pirin A2cp1_0433 PF00005 ABC transporter A2cp1_0436 PF00108 Thiolase, N-terminal domain A2cp1_0436 PF02803 Thiolase, C-terminal domain A2cp1_0437 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A2cp1_0437 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A2cp1_0437 PF00378 Enoyl-CoA hydratase/isomerase A2cp1_0439 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0439 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0440 PF00072 Response regulator receiver domain A2cp1_0440 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0441 PF03841 L-seryl-tRNA selenium transferase A2cp1_0441 PF12390 Selenocysteine synthase N terminal A2cp1_0442 PF00361 Proton-conducting membrane transporter A2cp1_0442 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A2cp1_0443 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus A2cp1_0443 PF00361 Proton-conducting membrane transporter A2cp1_0444 PF00361 Proton-conducting membrane transporter A2cp1_0446 PF02954 Bacterial regulatory protein, Fis family A2cp1_0446 PF00072 Response regulator receiver domain A2cp1_0446 PF00158 Sigma-54 interaction domain A2cp1_0447 PF00989 PAS fold A2cp1_0447 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0448 PF09107 Elongation factor SelB, winged helix A2cp1_0448 PF00009 Elongation factor Tu GTP binding domain A2cp1_0448 PF09106 Elongation factor SelB, winged helix A2cp1_0448 PF03144 Elongation factor Tu domain 2 A2cp1_0449 PF00156 Phosphoribosyl transferase domain A2cp1_0450 PF01430 Hsp33 protein A2cp1_0452 PF16363 GDP-mannose 4,6 dehydratase A2cp1_0453 PF01553 Acyltransferase A2cp1_0455 PF01047 MarR family A2cp1_0458 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_0458 PF05230 MASE2 domain A2cp1_0461 PF03747 ADP-ribosylglycohydrolase A2cp1_0463 PF12320 Type 5 capsule protein repressor C-terminal domain A2cp1_0463 PF00149 Calcineurin-like phosphoesterase A2cp1_0466 PF02417 Chromate transporter A2cp1_0470 PF12704 MacB-like periplasmic core domain A2cp1_0470 PF00005 ABC transporter A2cp1_0470 PF02687 FtsX-like permease family A2cp1_0476 PF00440 Bacterial regulatory proteins, tetR family A2cp1_0478 PF00982 Glycosyltransferase family 20 A2cp1_0480 PF00248 Aldo/keto reductase family A2cp1_0484 PF00005 ABC transporter A2cp1_0484 PF03466 LysR substrate binding domain A2cp1_0485 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_0491 PF01039 Carboxyl transferase domain A2cp1_0492 PF00289 Biotin carboxylase, N-terminal domain A2cp1_0492 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A2cp1_0492 PF02785 Biotin carboxylase C-terminal domain A2cp1_0496 PF00690 Cation transporter/ATPase, N-terminus A2cp1_0496 PF00689 Cation transporting ATPase, C-terminus A2cp1_0497 PF09861 Lactate racemase N-terminal domain A2cp1_0498 PF00155 Aminotransferase class I and II A2cp1_0499 PF02492 CobW/HypB/UreG, nucleotide-binding domain A2cp1_0500 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA A2cp1_0501 PF02769 AIR synthase related protein, C-terminal domain A2cp1_0501 PF00586 AIR synthase related protein, N-terminal domain A2cp1_0502 PF01924 Hydrogenase formation hypA family A2cp1_0503 PF01455 HupF/HypC family A2cp1_0504 PF00708 Acylphosphatase A2cp1_0504 PF01300 Telomere recombination A2cp1_0504 PF07503 HypF finger A2cp1_0504 PF17788 HypF Kae1-like domain A2cp1_0506 PF00374 Nickel-dependent hydrogenase A2cp1_0507 PF03916 Polysulphide reductase, NrfD A2cp1_0508 PF13247 4Fe-4S dicluster domain A2cp1_0509 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A2cp1_0509 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal A2cp1_0515 PF02308 MgtC family A2cp1_0516 PF01169 Uncharacterized protein family UPF0016 A2cp1_0521 PF00005 ABC transporter A2cp1_0523 PF01891 Cobalt uptake substrate-specific transmembrane region A2cp1_0523 PF13190 PDGLE domain A2cp1_0525 PF08753 NikR C terminal nickel binding domain A2cp1_0525 PF01402 Ribbon-helix-helix protein, copG family A2cp1_0526 PF00294 pfkB family carbohydrate kinase A2cp1_0526 PF01467 Cytidylyltransferase-like A2cp1_0532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0533 PF00072 Response regulator receiver domain A2cp1_0533 PF00158 Sigma-54 interaction domain A2cp1_0533 PF02954 Bacterial regulatory protein, Fis family A2cp1_0535 PF00672 HAMP domain A2cp1_0535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0535 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0535 PF16767 Sensor domain of alginate biosynthesis sensor protein KinB A2cp1_0535 PF08448 PAS fold A2cp1_0536 PF01593 Flavin containing amine oxidoreductase A2cp1_0538 PF07995 Glucose / Sorbosone dehydrogenase A2cp1_0539 PF14760 Rnk N-terminus A2cp1_0539 PF01272 Transcription elongation factor, GreA/GreB, C-term A2cp1_0543 PF03741 Integral membrane protein TerC family A2cp1_0545 PF02321 Outer membrane efflux protein A2cp1_0546 PF00873 AcrB/AcrD/AcrF family A2cp1_0547 PF00529 HlyD membrane-fusion protein of T1SS A2cp1_0547 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_0548 PF00440 Bacterial regulatory proteins, tetR family A2cp1_0549 PF00128 Alpha amylase, catalytic domain A2cp1_0551 PF00561 alpha/beta hydrolase fold A2cp1_0553 PF04304 Protein of unknown function (DUF454) A2cp1_0558 PF18029 Glyoxalase-like domain A2cp1_0559 PF01569 PAP2 superfamily A2cp1_0560 PF01734 Patatin-like phospholipase A2cp1_0562 PF00155 Aminotransferase class I and II A2cp1_0564 PF03922 OmpW family A2cp1_0565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0565 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0567 PF00005 ABC transporter A2cp1_0568 PF02632 BioY family A2cp1_0569 PF01738 Dienelactone hydrolase family A2cp1_0571 PF03466 LysR substrate binding domain A2cp1_0571 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0578 PF00561 alpha/beta hydrolase fold A2cp1_0579 PF03466 LysR substrate binding domain A2cp1_0579 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0582 PF07690 Major Facilitator Superfamily A2cp1_0586 PF04542 Sigma-70 region 2 A2cp1_0586 PF08281 Sigma-70, region 4 A2cp1_0591 PF06736 Protein of unknown function (DUF1211) A2cp1_0592 PF02463 RecF/RecN/SMC N terminal domain A2cp1_0593 PF02661 Fic/DOC family A2cp1_0593 PF13784 Fic/DOC family N-terminal A2cp1_0594 PF12137 RNA polymerase recycling family C-terminal A2cp1_0594 PF00271 Helicase conserved C-terminal domain A2cp1_0594 PF18337 RapA N-terminal Tudor like domain A2cp1_0594 PF18339 RapA N-terminal Tudor like domain 1 A2cp1_0594 PF00176 SNF2 family N-terminal domain A2cp1_0595 PF01546 Peptidase family M20/M25/M40 A2cp1_0595 PF07687 Peptidase dimerisation domain A2cp1_0596 PF01979 Amidohydrolase family A2cp1_0597 PF01678 Diaminopimelate epimerase A2cp1_0598 PF00072 Response regulator receiver domain A2cp1_0598 PF02954 Bacterial regulatory protein, Fis family A2cp1_0598 PF00158 Sigma-54 interaction domain A2cp1_0599 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0599 PF00072 Response regulator receiver domain A2cp1_0600 PF02567 Phenazine biosynthesis-like protein A2cp1_0603 PF00675 Insulinase (Peptidase family M16) A2cp1_0603 PF05193 Peptidase M16 inactive domain A2cp1_0604 PF13426 PAS domain A2cp1_0604 PF13188 PAS domain A2cp1_0604 PF00989 PAS fold A2cp1_0604 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0609 PF00196 Bacterial regulatory proteins, luxR family A2cp1_0609 PF00072 Response regulator receiver domain A2cp1_0610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A2cp1_0610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase A2cp1_0613 PF01316 Arginine repressor, DNA binding domain A2cp1_0613 PF02863 Arginine repressor, C-terminal domain A2cp1_0614 PF01960 ArgJ family A2cp1_0615 PF02774 Semialdehyde dehydrogenase, dimerisation domain A2cp1_0615 PF01118 Semialdehyde dehydrogenase, NAD binding domain A2cp1_0617 PF11412 Disulphide bond corrector protein DsbC A2cp1_0617 PF02683 Cytochrome C biogenesis protein transmembrane region A2cp1_0618 PF00266 Aminotransferase class-V A2cp1_0619 PF01592 NifU-like N terminal domain A2cp1_0620 PF01521 Iron-sulphur cluster biosynthesis A2cp1_0621 PF07743 HSCB C-terminal oligomerisation domain A2cp1_0622 PF00012 Hsp70 protein A2cp1_0624 PF04384 Iron-sulphur cluster assembly A2cp1_0625 PF01339 CheB methylesterase A2cp1_0625 PF00072 Response regulator receiver domain A2cp1_0626 PF03705 CheR methyltransferase, all-alpha domain A2cp1_0626 PF01739 CheR methyltransferase, SAM binding domain A2cp1_0627 PF01584 CheW-like domain A2cp1_0628 PF02895 Signal transducing histidine kinase, homodimeric domain A2cp1_0628 PF01627 Hpt domain A2cp1_0628 PF01584 CheW-like domain A2cp1_0628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0628 PF07194 P2 response regulator binding domain A2cp1_0629 PF03975 CheD chemotactic sensory transduction A2cp1_0631 PF00072 Response regulator receiver domain A2cp1_0631 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0634 PF00072 Response regulator receiver domain A2cp1_0634 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0637 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_0638 PF00072 Response regulator receiver domain A2cp1_0638 PF01627 Hpt domain A2cp1_0638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0638 PF01584 CheW-like domain A2cp1_0639 PF00072 Response regulator receiver domain A2cp1_0639 PF01339 CheB methylesterase A2cp1_0640 PF01739 CheR methyltransferase, SAM binding domain A2cp1_0641 PF00072 Response regulator receiver domain A2cp1_0643 PF05050 Methyltransferase FkbM domain A2cp1_0646 PF13439 Glycosyltransferase Family 4 A2cp1_0646 PF00534 Glycosyl transferases group 1 A2cp1_0651 PF02885 Glycosyl transferase family, helical bundle domain A2cp1_0651 PF00591 Glycosyl transferase family, a/b domain A2cp1_0651 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain A2cp1_0652 PF01048 Phosphorylase superfamily A2cp1_0654 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A2cp1_0655 PF06574 FAD synthetase A2cp1_0655 PF01687 Riboflavin kinase A2cp1_0656 PF00437 Type II/IV secretion system protein A2cp1_0656 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A2cp1_0657 PF00437 Type II/IV secretion system protein A2cp1_0658 PF00482 Type II secretion system (T2SS), protein F A2cp1_0659 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0659 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0659 PF00989 PAS fold A2cp1_0660 PF02954 Bacterial regulatory protein, Fis family A2cp1_0660 PF00072 Response regulator receiver domain A2cp1_0660 PF00158 Sigma-54 interaction domain A2cp1_0669 PF07963 Prokaryotic N-terminal methylation motif A2cp1_0669 PF14245 Type IV pilin PilA A2cp1_0670 PF00005 ABC transporter A2cp1_0671 PF06750 Bacterial Peptidase A24 N-terminal domain A2cp1_0671 PF01478 Type IV leader peptidase family A2cp1_0672 PF00072 Response regulator receiver domain A2cp1_0672 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0672 PF13188 PAS domain A2cp1_0672 PF08448 PAS fold A2cp1_0672 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0673 PF02954 Bacterial regulatory protein, Fis family A2cp1_0673 PF00072 Response regulator receiver domain A2cp1_0673 PF00158 Sigma-54 interaction domain A2cp1_0675 PF11983 Membrane-attachment and polymerisation-promoting switch A2cp1_0675 PF02491 SHS2 domain inserted in FTSA A2cp1_0679 PF07660 Secretin and TonB N terminus short domain A2cp1_0679 PF03958 Bacterial type II/III secretion system short domain A2cp1_0679 PF00263 Bacterial type II and III secretion system protein A2cp1_0679 PF11741 AMIN domain A2cp1_0682 PF01132 Elongation factor P (EF-P) OB domain A2cp1_0682 PF08207 Elongation factor P (EF-P) KOW-like domain A2cp1_0682 PF09285 Elongation factor P, C-terminal A2cp1_0683 PF00364 Biotin-requiring enzyme A2cp1_0684 PF02785 Biotin carboxylase C-terminal domain A2cp1_0684 PF00289 Biotin carboxylase, N-terminal domain A2cp1_0684 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A2cp1_0687 PF01471 Putative peptidoglycan binding domain A2cp1_0687 PF13401 AAA domain A2cp1_0689 PF01103 Surface antigen A2cp1_0689 PF07244 Surface antigen variable number repeat A2cp1_0690 PF00403 Heavy-metal-associated domain A2cp1_0692 PF03551 Transcriptional regulator PadR-like family A2cp1_0692 PF13847 Methyltransferase domain A2cp1_0693 PF02541 Ppx/GppA phosphatase family A2cp1_0694 PF04052 TolB amino-terminal domain A2cp1_0694 PF07676 WD40-like Beta Propeller Repeat A2cp1_0696 PF02472 Biopolymer transport protein ExbD/TolR A2cp1_0697 PF01618 MotA/TolQ/ExbB proton channel family A2cp1_0699 PF01177 Asp/Glu/Hydantoin racemase A2cp1_0701 PF00005 ABC transporter A2cp1_0702 PF18075 FtsX extracellular domain A2cp1_0702 PF02687 FtsX-like permease family A2cp1_0703 PF01551 Peptidase family M23 A2cp1_0704 PF13180 PDZ domain A2cp1_0704 PF03572 Peptidase family S41 A2cp1_0707 PF13419 Haloacid dehalogenase-like hydrolase A2cp1_0708 PF02881 SRP54-type protein, helical bundle domain A2cp1_0708 PF00448 SRP54-type protein, GTPase domain A2cp1_0709 PF02463 RecF/RecN/SMC N terminal domain A2cp1_0709 PF06470 SMC proteins Flexible Hinge Domain A2cp1_0710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_0710 PF00672 HAMP domain A2cp1_0710 PF17202 Single cache domain 3 A2cp1_0715 PF07963 Prokaryotic N-terminal methylation motif A2cp1_0715 PF11612 Type II secretion system (T2SS), protein J A2cp1_0717 PF08334 Type II secretion system (T2SS), protein G A2cp1_0717 PF07963 Prokaryotic N-terminal methylation motif A2cp1_0718 PF08334 Type II secretion system (T2SS), protein G A2cp1_0718 PF07963 Prokaryotic N-terminal methylation motif A2cp1_0719 PF00482 Type II secretion system (T2SS), protein F A2cp1_0720 PF00437 Type II/IV secretion system protein A2cp1_0721 PF03958 Bacterial type II/III secretion system short domain A2cp1_0721 PF00263 Bacterial type II and III secretion system protein A2cp1_0723 PF00158 Sigma-54 interaction domain A2cp1_0723 PF02954 Bacterial regulatory protein, Fis family A2cp1_0723 PF00072 Response regulator receiver domain A2cp1_0725 PF01197 Ribosomal protein L31 A2cp1_0726 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_0726 PF07498 Rho termination factor, N-terminal domain A2cp1_0726 PF07497 Rho termination factor, RNA-binding domain A2cp1_0728 PF07963 Prokaryotic N-terminal methylation motif A2cp1_0728 PF00114 Pilin (bacterial filament) A2cp1_0729 PF00533 BRCA1 C Terminus (BRCT) domain A2cp1_0729 PF01653 NAD-dependent DNA ligase adenylation domain A2cp1_0729 PF03120 NAD-dependent DNA ligase OB-fold domain A2cp1_0729 PF03119 NAD-dependent DNA ligase C4 zinc finger domain A2cp1_0729 PF12826 Helix-hairpin-helix motif A2cp1_0730 PF00708 Acylphosphatase A2cp1_0732 PF10150 Ribonuclease E/G family A2cp1_0732 PF00575 S1 RNA binding domain A2cp1_0732 PF10150 Ribonuclease E/G family A2cp1_0732 PF00575 S1 RNA binding domain A2cp1_0733 PF03631 Virulence factor BrkB A2cp1_0734 PF00216 Bacterial DNA-binding protein A2cp1_0735 PF00771 FHIPEP family A2cp1_0736 PF01312 FlhB HrpN YscU SpaS Family A2cp1_0738 PF01313 Bacterial export proteins, family 3 A2cp1_0739 PF00813 FliP family A2cp1_0741 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A2cp1_0743 PF01514 Secretory protein of YscJ/FliF family A2cp1_0748 PF00196 Bacterial regulatory proteins, luxR family A2cp1_0748 PF00072 Response regulator receiver domain A2cp1_0749 PF00815 Histidinol dehydrogenase A2cp1_0750 PF00475 Imidazoleglycerol-phosphate dehydratase A2cp1_0751 PF00117 Glutamine amidotransferase class-I A2cp1_0752 PF00977 Histidine biosynthesis protein A2cp1_0753 PF00977 Histidine biosynthesis protein A2cp1_0755 PF01165 Ribosomal protein S21 A2cp1_0757 PF01807 CHC2 zinc finger A2cp1_0757 PF08275 DNA primase catalytic core, N-terminal domain A2cp1_0757 PF10410 DnaB-helicase binding domain of primase A2cp1_0758 PF04545 Sigma-70, region 4 A2cp1_0758 PF04546 Sigma-70, non-essential region A2cp1_0758 PF03979 Sigma-70 factor, region 1.1 A2cp1_0758 PF00140 Sigma-70 factor, region 1.2 A2cp1_0758 PF04542 Sigma-70 region 2 A2cp1_0758 PF04539 Sigma-70 region 3 A2cp1_0760 PF13456 Reverse transcriptase-like A2cp1_0760 PF00300 Histidine phosphatase superfamily (branch 1) A2cp1_0761 PF01184 GPR1/FUN34/yaaH family A2cp1_0762 PF01327 Polypeptide deformylase A2cp1_0764 PF04851 Type III restriction enzyme, res subunit A2cp1_0764 PF00271 Helicase conserved C-terminal domain A2cp1_0764 PF17764 3′ DNA-binding domain (3′BD) A2cp1_0764 PF18074 Primosomal protein N C-terminal domain A2cp1_0764 PF18319 PriA DNA helicase Cys-rich region (CRR) domain A2cp1_0767 PF16193 AAA C-terminal domain A2cp1_0767 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_0767 PF12002 MgsA AAA+ ATPase C terminal A2cp1_0768 PF01513 ATP-NAD kinase A2cp1_0769 PF02463 RecF/RecN/SMC N terminal domain A2cp1_0771 PF01476 LysM domain A2cp1_0771 PF01551 Peptidase family M23 A2cp1_0771 PF08525 Opacity-associated protein A N-terminal motif A2cp1_0773 PF02810 SEC-C motif A2cp1_0773 PF07516 SecA Wing and Scaffold domain A2cp1_0773 PF01043 SecA preprotein cross-linking domain A2cp1_0773 PF07517 SecA DEAD-like domain A2cp1_0778 PF00270 DEAD/DEAH box helicase A2cp1_0778 PF18019 HD domain A2cp1_0778 PF00271 Helicase conserved C-terminal domain A2cp1_0784 PF01867 CRISPR associated protein Cas1 A2cp1_0786 PF01695 IstB-like ATP binding protein A2cp1_0793 PF12680 SnoaL-like domain A2cp1_0793 PF08281 Sigma-70, region 4 A2cp1_0793 PF04542 Sigma-70 region 2 A2cp1_0798 PF01594 AI-2E family transporter A2cp1_0800 PF00535 Glycosyl transferase family 2 A2cp1_0802 PF00156 Phosphoribosyl transferase domain A2cp1_0803 PF01476 LysM domain A2cp1_0803 PF08525 Opacity-associated protein A N-terminal motif A2cp1_0803 PF01551 Peptidase family M23 A2cp1_0804 PF01975 Survival protein SurE A2cp1_0806 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0806 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0807 PF01161 Phosphatidylethanolamine-binding protein A2cp1_0810 PF12801 4Fe-4S binding domain A2cp1_0811 PF00892 EamA-like transporter family A2cp1_0812 PF00582 Universal stress protein family A2cp1_0813 PF01180 Dihydroorotate dehydrogenase A2cp1_0817 PF02754 Cysteine-rich domain A2cp1_0817 PF13183 4Fe-4S dicluster domain A2cp1_0820 PF00929 Exonuclease A2cp1_0823 PF00009 Elongation factor Tu GTP binding domain A2cp1_0825 PF01790 Prolipoprotein diacylglyceryl transferase A2cp1_0828 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0828 PF00072 Response regulator receiver domain A2cp1_0830 PF00571 CBS domain A2cp1_0830 PF03471 Transporter associated domain A2cp1_0830 PF01595 Cyclin M transmembrane N-terminal domain A2cp1_0833 PF16078 2-oxoglutarate dehydrogenase N-terminus A2cp1_0833 PF00676 Dehydrogenase E1 component A2cp1_0833 PF16870 2-oxoglutarate dehydrogenase C-terminal A2cp1_0833 PF02779 Transketolase, pyrimidine binding domain A2cp1_0834 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A2cp1_0834 PF02817 e3 binding domain A2cp1_0834 PF00364 Biotin-requiring enzyme A2cp1_0836 PF13298 DNA polymerase Ligase (LigD) A2cp1_0836 PF04679 ATP dependent DNA ligase C terminal region A2cp1_0836 PF01068 ATP dependent DNA ligase domain A2cp1_0839 PF00270 DEAD/DEAH box helicase A2cp1_0839 PF04408 Helicase associated domain (HA2) A2cp1_0839 PF00271 Helicase conserved C-terminal domain A2cp1_0839 PF08482 ATP-dependent helicase C-terminal A2cp1_0840 PF00011 Hsp20/alpha crystallin family A2cp1_0841 PF02861 Clp amino terminal domain, pathogenicity island component A2cp1_0841 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_0841 PF17871 AAA lid domain A2cp1_0841 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_0841 PF07724 AAA domain (Cdc48 subfamily) A2cp1_0842 PF02617 ATP-dependent Clp protease adaptor protein ClpS A2cp1_0843 PF00326 Prolyl oligopeptidase family A2cp1_0844 PF03588 Leucyl/phenylalanyl-tRNA protein transferase A2cp1_0846 PF04542 Sigma-70 region 2 A2cp1_0846 PF08281 Sigma-70, region 4 A2cp1_0848 PF13247 4Fe-4S dicluster domain A2cp1_0848 PF00037 4Fe-4S binding domain A2cp1_0855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A2cp1_0855 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A2cp1_0856 PF00115 Cytochrome C and Quinol oxidase polypeptide I A2cp1_0857 PF00510 Cytochrome c oxidase subunit III A2cp1_0860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A2cp1_0860 PF00205 Thiamine pyrophosphate enzyme, central domain A2cp1_0860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_0861 PF13378 Enolase C-terminal domain-like A2cp1_0861 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain A2cp1_0862 PF01565 FAD binding domain A2cp1_0862 PF02913 FAD linked oxidases, C-terminal domain A2cp1_0862 PF13183 4Fe-4S dicluster domain A2cp1_0863 PF01661 Macro domain A2cp1_0864 PF00158 Sigma-54 interaction domain A2cp1_0864 PF02954 Bacterial regulatory protein, Fis family A2cp1_0864 PF00072 Response regulator receiver domain A2cp1_0865 PF01578 Cytochrome C assembly protein A2cp1_0868 PF01068 ATP dependent DNA ligase domain A2cp1_0868 PF04679 ATP dependent DNA ligase C terminal region A2cp1_0869 PF04898 Glutamate synthase central domain A2cp1_0869 PF00310 Glutamine amidotransferases class-II A2cp1_0869 PF01493 GXGXG motif A2cp1_0869 PF01645 Conserved region in glutamate synthase A2cp1_0870 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_0870 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A2cp1_0872 PF07690 Major Facilitator Superfamily A2cp1_0873 PF04055 Radical SAM superfamily A2cp1_0873 PF06463 Molybdenum Cofactor Synthesis C A2cp1_0875 PF09163 Formate dehydrogenase N, transmembrane A2cp1_0875 PF12800 4Fe-4S binding domain A2cp1_0875 PF13247 4Fe-4S dicluster domain A2cp1_0877 PF02634 FdhD/NarQ family A2cp1_0878 PF13538 UvrD-like helicase C-terminal domain A2cp1_0879 PF08534 Redoxin A2cp1_0880 PF00005 ABC transporter A2cp1_0880 PF12848 ABC transporter A2cp1_0881 PF00171 Aldehyde dehydrogenase family A2cp1_0883 PF02954 Bacterial regulatory protein, Fis family A2cp1_0883 PF00072 Response regulator receiver domain A2cp1_0883 PF00158 Sigma-54 interaction domain A2cp1_0884 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0884 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0885 PF00005 ABC transporter A2cp1_0886 PF01061 ABC-2 type transporter A2cp1_0888 PF00270 DEAD/DEAH box helicase A2cp1_0888 PF09382 RQC domain A2cp1_0888 PF00271 Helicase conserved C-terminal domain A2cp1_0888 PF16124 RecQ zinc-binding A2cp1_0888 PF00570 HRDC domain A2cp1_0891 PF07152 YaeQ protein A2cp1_0892 PF02082 Transcriptional regulator A2cp1_0893 PF01458 Uncharacterized protein family (UPF0051) A2cp1_0894 PF00005 ABC transporter A2cp1_0895 PF01458 Uncharacterized protein family (UPF0051) A2cp1_0896 PF00266 Aminotransferase class-V A2cp1_0897 PF01592 NifU-like N terminal domain A2cp1_0901 PF17820 PDZ domain A2cp1_0901 PF01471 Putative peptidoglycan binding domain A2cp1_0901 PF03572 Peptidase family S41 A2cp1_0903 PF00005 ABC transporter A2cp1_0903 PF02687 FtsX-like permease family A2cp1_0903 PF12704 MacB-like periplasmic core domain A2cp1_0904 PF13180 PDZ domain A2cp1_0905 PF13180 PDZ domain A2cp1_0906 PF00072 Response regulator receiver domain A2cp1_0906 PF00196 Bacterial regulatory proteins, luxR family A2cp1_0909 PF01253 Translation initiation factor SUI1 A2cp1_0912 PF01546 Peptidase family M20/M25/M40 A2cp1_0912 PF07687 Peptidase dimerisation domain A2cp1_0913 PF00343 Carbohydrate phosphorylase A2cp1_0916 PF04011 LemA family A2cp1_0919 PF03471 Transporter associated domain A2cp1_0919 PF00999 Sodium/hydrogen exchanger family A2cp1_0921 PF07883 Cupin domain A2cp1_0921 PF01381 Helix-turn-helix A2cp1_0922 PF00072 Response regulator receiver domain A2cp1_0922 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0932 PF01145 SPFH domain / Band 7 family A2cp1_0935 PF01068 ATP dependent DNA ligase domain A2cp1_0935 PF13298 DNA polymerase Ligase (LigD) A2cp1_0935 PF04679 ATP dependent DNA ligase C terminal region A2cp1_0938 PF00924 Mechanosensitive ion channel A2cp1_0942 PF00072 Response regulator receiver domain A2cp1_0942 PF00486 Transcriptional regulatory protein, C terminal A2cp1_0943 PF13493 Domain of unknown function (DUF4118) A2cp1_0943 PF13492 GAF domain A2cp1_0943 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_0943 PF02702 Osmosensitive K+ channel His kinase sensor domain A2cp1_0943 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_0945 PF13520 Amino acid permease A2cp1_0949 PF04238 Protein of unknown function (DUF420) A2cp1_0951 PF00005 ABC transporter A2cp1_0952 PF01040 UbiA prenyltransferase family A2cp1_0954 PF01171 PP-loop family A2cp1_0955 PF01791 DeoC/LacD family aldolase A2cp1_0956 PF01676 Metalloenzyme superfamily A2cp1_0961 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_0961 PF00384 Molybdopterin oxidoreductase A2cp1_0961 PF01568 Molydopterin dinucleotide binding domain A2cp1_0963 PF02335 Cytochrome c552 A2cp1_0965 PF07732 Multicopper oxidase A2cp1_0965 PF00394 Multicopper oxidase A2cp1_0965 PF07731 Multicopper oxidase A2cp1_0976 PF00072 Response regulator receiver domain A2cp1_0976 PF00158 Sigma-54 interaction domain A2cp1_0976 PF02954 Bacterial regulatory protein, Fis family A2cp1_0980 PF01053 Cys/Met metabolism PLP-dependent enzyme A2cp1_0981 PF00501 AMP-binding enzyme A2cp1_0983 PF01894 Uncharacterised protein family UPF0047 A2cp1_0984 PF02374 Anion-transporting ATPase A2cp1_0984 PF17886 HSP20-like domain found in ArsA A2cp1_0985 PF02374 Anion-transporting ATPase A2cp1_0987 PF13614 AAA domain A2cp1_0988 PF03466 LysR substrate binding domain A2cp1_0988 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_0989 PF04264 YceI-like domain A2cp1_0990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase A2cp1_0991 PF05233 PHB accumulation regulatory domain A2cp1_0991 PF07879 PHB/PHA accumulation regulator DNA-binding domain A2cp1_0994 PF02416 mttA/Hcf106 family A2cp1_0995 PF03009 Glycerophosphoryl diester phosphodiesterase family A2cp1_0997 PF01654 Cytochrome bd terminal oxidase subunit I A2cp1_0998 PF02322 Cytochrome bd terminal oxidase subunit II A2cp1_0999 PF14759 Reductase C-terminal A2cp1_0999 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_1000 PF01212 Beta-eliminating lyase A2cp1_1001 PF03190 Protein of unknown function, DUF255 A2cp1_1004 PF01139 tRNA-splicing ligase RtcB A2cp1_1006 PF01554 MatE A2cp1_1007 PF02705 K+ potassium transporter A2cp1_1008 PF05977 Transmembrane secretion effector A2cp1_1009 PF02075 Crossover junction endodeoxyribonuclease RuvC A2cp1_1010 PF01330 RuvA N terminal domain A2cp1_1010 PF07499 RuvA, C-terminal domain A2cp1_1011 PF17864 RuvB AAA lid domain A2cp1_1011 PF05496 Holliday junction DNA helicase RuvB P-loop domain A2cp1_1011 PF05491 RuvB C-terminal winged helix domain A2cp1_1013 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase A2cp1_1015 PF03364 Polyketide cyclase / dehydrase and lipid transport A2cp1_1020 PF04679 ATP dependent DNA ligase C terminal region A2cp1_1020 PF13298 DNA polymerase Ligase (LigD) A2cp1_1020 PF01068 ATP dependent DNA ligase domain A2cp1_1021 PF02735 Ku70/Ku80 beta-barrel domain A2cp1_1024 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A2cp1_1024 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A2cp1_1025 PF01925 Sulfite exporter TauE/SafE A2cp1_1026 PF00072 Response regulator receiver domain A2cp1_1026 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1028 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain A2cp1_1028 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain A2cp1_1029 PF02805 Metal binding domain of Ada A2cp1_1029 PF12833 Helix-turn-helix domain A2cp1_1029 PF00730 HhH-GPD superfamily base excision DNA repair protein A2cp1_1029 PF06029 AlkA N-terminal domain A2cp1_1034 PF00158 Sigma-54 interaction domain A2cp1_1034 PF01590 GAF domain A2cp1_1035 PF07690 Major Facilitator Superfamily A2cp1_1036 PF03466 LysR substrate binding domain A2cp1_1036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1040 PF00245 Alkaline phosphatase A2cp1_1041 PF00245 Alkaline phosphatase A2cp1_1044 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1045 PF00072 Response regulator receiver domain A2cp1_1046 PF13181 Tetratricopeptide repeat A2cp1_1046 PF01435 Peptidase family M48 A2cp1_1049 PF00313 'Cold-shock' DNA-binding domain A2cp1_1052 PF18389 TrmO C-terminal domain A2cp1_1052 PF01980 tRNA-methyltransferase O A2cp1_1057 PF00583 Acetyltransferase (GNAT) family A2cp1_1059 PF03459 TOBE domain A2cp1_1059 PF00005 ABC transporter A2cp1_1060 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_1063 PF02608 ABC transporter substrate-binding protein PnrA-like A2cp1_1066 PF00005 ABC transporter A2cp1_1067 PF00156 Phosphoribosyl transferase domain A2cp1_1076 PF00205 Thiamine pyrophosphate enzyme, central domain A2cp1_1076 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_1076 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A2cp1_1077 PF00534 Glycosyl transferases group 1 A2cp1_1077 PF13439 Glycosyltransferase Family 4 A2cp1_1078 PF02585 GlcNAc-PI de-N-acetylase A2cp1_1080 PF00873 AcrB/AcrD/AcrF family A2cp1_1081 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_1084 PF01451 Low molecular weight phosphotyrosine protein phosphatase A2cp1_1085 PF01758 Sodium Bile acid symporter family A2cp1_1086 PF01022 Bacterial regulatory protein, arsR family A2cp1_1087 PF00085 Thioredoxin A2cp1_1091 PF01209 ubiE/COQ5 methyltransferase family A2cp1_1094 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1094 PF03466 LysR substrate binding domain A2cp1_1103 PF06470 SMC proteins Flexible Hinge Domain A2cp1_1103 PF02463 RecF/RecN/SMC N terminal domain A2cp1_1110 PF18340 DNA relaxase TraI 2B/2B-like domain A2cp1_1110 PF18272 single-stranded DNA binding TraI N-terminal subdomain A2cp1_1110 PF07057 DNA helicase TraI A2cp1_1110 PF08751 TrwC relaxase A2cp1_1111 PF12615 F sex factor protein N terminal A2cp1_1111 PF10412 Type IV secretion-system coupling protein DNA-binding domain A2cp1_1113 PF17762 HTH domain found in ParB protein A2cp1_1113 PF02195 ParB-like nuclease domain A2cp1_1119 PF05762 VWA domain containing CoxE-like protein A2cp1_1120 PF17868 AAA lid domain A2cp1_1120 PF12592 Protein of unknown function (DUF3763) A2cp1_1120 PF07728 AAA domain (dynein-related subfamily) A2cp1_1122 PF04002 RadC-like JAB domain A2cp1_1123 PF17762 HTH domain found in ParB protein A2cp1_1123 PF02195 ParB-like nuclease domain A2cp1_1126 PF08308 PEGA domain A2cp1_1126 PF00069 Protein kinase domain A2cp1_1137 PF03135 CagE, TrbE, VirB family, component of type IV transporter system A2cp1_1138 PF08275 DNA primase catalytic core, N-terminal domain A2cp1_1138 PF01807 CHC2 zinc finger A2cp1_1138 PF10410 DnaB-helicase binding domain of primase A2cp1_1140 PF04610 TrbL/VirB6 plasmid conjugal transfer protein A2cp1_1142 PF04335 VirB8 protein A2cp1_1143 PF03524 Conjugal transfer protein A2cp1_1144 PF03743 Bacterial conjugation TrbI-like protein A2cp1_1145 PF00437 Type II/IV secretion system protein A2cp1_1160 PF08494 DEAD/H associated A2cp1_1160 PF00271 Helicase conserved C-terminal domain A2cp1_1160 PF00270 DEAD/DEAH box helicase A2cp1_1166 PF00857 Isochorismatase family A2cp1_1167 PF00037 4Fe-4S binding domain A2cp1_1168 PF00037 4Fe-4S binding domain A2cp1_1170 PF01728 FtsJ-like methyltransferase A2cp1_1171 PF00579 tRNA synthetases class I (W and Y) A2cp1_1172 PF13277 YmdB-like protein A2cp1_1174 PF00069 Protein kinase domain A2cp1_1174 PF08308 PEGA domain A2cp1_1175 PF00266 Aminotransferase class-V A2cp1_1177 PF01261 Xylose isomerase-like TIM barrel A2cp1_1179 PF01063 Amino-transferase class IV A2cp1_1181 PF08335 GlnD PII-uridylyltransferase A2cp1_1181 PF03710 Glutamate-ammonia ligase adenylyltransferase A2cp1_1183 PF00072 Response regulator receiver domain A2cp1_1183 PF02954 Bacterial regulatory protein, Fis family A2cp1_1183 PF00158 Sigma-54 interaction domain A2cp1_1184 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) A2cp1_1184 PF00128 Alpha amylase, catalytic domain A2cp1_1185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A2cp1_1185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A2cp1_1185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A2cp1_1188 PF01370 NAD dependent epimerase/dehydratase family A2cp1_1189 PF16363 GDP-mannose 4,6 dehydratase A2cp1_1190 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_1190 PF00107 Zinc-binding dehydrogenase A2cp1_1191 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A2cp1_1191 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A2cp1_1192 PF00534 Glycosyl transferases group 1 A2cp1_1192 PF13439 Glycosyltransferase Family 4 A2cp1_1195 PF00005 ABC transporter A2cp1_1195 PF00664 ABC transporter transmembrane region A2cp1_1197 PF00140 Sigma-70 factor, region 1.2 A2cp1_1197 PF04545 Sigma-70, region 4 A2cp1_1197 PF04542 Sigma-70 region 2 A2cp1_1198 PF00106 short chain dehydrogenase A2cp1_1199 PF00989 PAS fold A2cp1_1199 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1199 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1199 PF00672 HAMP domain A2cp1_1202 PF00069 Protein kinase domain A2cp1_1202 PF07238 PilZ domain A2cp1_1204 PF03065 Glycosyl hydrolase family 57 A2cp1_1204 PF09210 Domain of unknown function (DUF1957) A2cp1_1206 PF01336 OB-fold nucleic acid binding domain A2cp1_1206 PF00152 tRNA synthetases class II (D, K and N) A2cp1_1207 PF12704 MacB-like periplasmic core domain A2cp1_1207 PF02687 FtsX-like permease family A2cp1_1208 PF00005 ABC transporter A2cp1_1209 PF07244 Surface antigen variable number repeat A2cp1_1209 PF01103 Surface antigen A2cp1_1211 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_1211 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD A2cp1_1212 PF07977 FabA-like domain A2cp1_1213 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_1213 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 A2cp1_1214 PF06230 LpxI C-terminal domain A2cp1_1214 PF17930 LpxI N-terminal domain A2cp1_1215 PF02594 Uncharacterised ACR, YggU family COG1872 A2cp1_1216 PF01208 Uroporphyrinogen decarboxylase (URO-D) A2cp1_1217 PF04055 Radical SAM superfamily A2cp1_1217 PF06969 HemN C-terminal domain A2cp1_1218 PF00762 Ferrochelatase A2cp1_1219 PF00226 DnaJ domain A2cp1_1219 PF00684 DnaJ central domain A2cp1_1219 PF01556 DnaJ C terminal domain A2cp1_1221 PF13742 OB-fold nucleic acid binding domain A2cp1_1221 PF02601 Exonuclease VII, large subunit A2cp1_1222 PF02609 Exonuclease VII small subunit A2cp1_1223 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1223 PF00072 Response regulator receiver domain A2cp1_1224 PF00348 Polyprenyl synthetase A2cp1_1225 PF13292 1-deoxy-D-xylulose-5-phosphate synthase A2cp1_1225 PF02779 Transketolase, pyrimidine binding domain A2cp1_1225 PF02780 Transketolase, C-terminal domain A2cp1_1226 PF01728 FtsJ-like methyltransferase A2cp1_1226 PF01479 S4 domain A2cp1_1227 PF02576 RimP N-terminal domain A2cp1_1227 PF17384 RimP C-terminal SH3 domain A2cp1_1228 PF00575 S1 RNA binding domain A2cp1_1228 PF08529 NusA N-terminal domain A2cp1_1228 PF13184 NusA-like KH domain A2cp1_1230 PF04760 Translation initiation factor IF-2, N-terminal region A2cp1_1230 PF11987 Translation-initiation factor 2 A2cp1_1230 PF00009 Elongation factor Tu GTP binding domain A2cp1_1232 PF02033 Ribosome-binding factor A A2cp1_1233 PF01509 TruB family pseudouridylate synthase (N terminal domain) A2cp1_1233 PF16198 tRNA pseudouridylate synthase B C-terminal domain A2cp1_1233 PF09157 Pseudouridine synthase II TruB, C-terminal A2cp1_1234 PF00312 Ribosomal protein S15 A2cp1_1235 PF03725 3' exoribonuclease family, domain 2 A2cp1_1235 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain A2cp1_1235 PF00575 S1 RNA binding domain A2cp1_1235 PF01138 3' exoribonuclease family, domain 1 A2cp1_1235 PF00013 KH domain A2cp1_1236 PF00692 dUTPase A2cp1_1237 PF00206 Lyase A2cp1_1237 PF10397 Adenylosuccinate lyase C-terminus A2cp1_1239 PF00672 HAMP domain A2cp1_1239 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1239 PF00989 PAS fold A2cp1_1239 PF18698 Histidine kinase sensor domain A2cp1_1239 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1240 PF01259 SAICAR synthetase A2cp1_1241 PF00588 SpoU rRNA Methylase family A2cp1_1243 PF13180 PDZ domain A2cp1_1245 PF13419 Haloacid dehalogenase-like hydrolase A2cp1_1246 PF00072 Response regulator receiver domain A2cp1_1247 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1247 PF00072 Response regulator receiver domain A2cp1_1248 PF02391 MoaE protein A2cp1_1249 PF17820 PDZ domain A2cp1_1249 PF02163 Peptidase family M50 A2cp1_1250 PF01871 AMMECR1 A2cp1_1251 PF00293 NUDIX domain A2cp1_1251 PF09297 NADH pyrophosphatase zinc ribbon domain A2cp1_1256 PF17760 UvrA interaction domain A2cp1_1256 PF17755 UvrA DNA-binding domain A2cp1_1256 PF00005 ABC transporter A2cp1_1259 PF00672 HAMP domain A2cp1_1259 PF13426 PAS domain A2cp1_1259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1259 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1261 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_1261 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_1261 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_1262 PF03091 CutA1 divalent ion tolerance protein A2cp1_1264 PF00069 Protein kinase domain A2cp1_1265 PF00072 Response regulator receiver domain A2cp1_1265 PF01966 HD domain A2cp1_1266 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_1266 PF07497 Rho termination factor, RNA-binding domain A2cp1_1266 PF07498 Rho termination factor, N-terminal domain A2cp1_1267 PF01343 Peptidase family S49 A2cp1_1268 PF02511 Thymidylate synthase complementing protein A2cp1_1269 PF03061 Thioesterase superfamily A2cp1_1270 PF05649 Peptidase family M13 A2cp1_1270 PF01431 Peptidase family M13 A2cp1_1273 PF10518 TAT (twin-arginine translocation) pathway signal sequence A2cp1_1273 PF00149 Calcineurin-like phosphoesterase A2cp1_1275 PF00578 AhpC/TSA family A2cp1_1277 PF00578 AhpC/TSA family A2cp1_1278 PF08534 Redoxin A2cp1_1279 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) A2cp1_1283 PF03006 Haemolysin-III related A2cp1_1284 PF00025 ADP-ribosylation factor family A2cp1_1286 PF01960 ArgJ family A2cp1_1289 PF02899 Phage integrase, N-terminal SAM-like domain A2cp1_1289 PF00589 Phage integrase family A2cp1_1302 PF03354 Phage Terminase A2cp1_1304 PF00574 Clp protease A2cp1_1315 PF14528 LAGLIDADG-like domain A2cp1_1315 PF03796 DnaB-like helicase C terminal domain A2cp1_1315 PF00772 DnaB-like helicase N terminal domain A2cp1_1321 PF08241 Methyltransferase domain A2cp1_1322 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_1322 PF00672 HAMP domain A2cp1_1322 PF16591 Helical bimodular sensor domain A2cp1_1323 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_1323 PF00107 Zinc-binding dehydrogenase A2cp1_1325 PF16363 GDP-mannose 4,6 dehydratase A2cp1_1326 PF13193 AMP-binding enzyme C-terminal domain A2cp1_1326 PF00501 AMP-binding enzyme A2cp1_1327 PF09861 Lactate racemase N-terminal domain A2cp1_1329 PF16363 GDP-mannose 4,6 dehydratase A2cp1_1331 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1331 PF01568 Molydopterin dinucleotide binding domain A2cp1_1331 PF00384 Molybdopterin oxidoreductase A2cp1_1332 PF00115 Cytochrome C and Quinol oxidase polypeptide I A2cp1_1333 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A2cp1_1333 PF01011 PQQ enzyme repeat A2cp1_1333 PF13360 PQQ-like domain A2cp1_1336 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase A2cp1_1336 PF13746 4Fe-4S dicluster domain A2cp1_1336 PF12801 4Fe-4S binding domain A2cp1_1339 PF00403 Heavy-metal-associated domain A2cp1_1341 PF00330 Aconitase family (aconitate hydratase) A2cp1_1341 PF06434 Aconitate hydratase 2 N-terminus A2cp1_1341 PF11791 Aconitate B N-terminal domain A2cp1_1346 PF10415 Fumarase C C-terminus A2cp1_1346 PF00206 Lyase A2cp1_1350 PF00749 tRNA synthetases class I (E and Q), catalytic domain A2cp1_1350 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain A2cp1_1352 PF00749 tRNA synthetases class I (E and Q), catalytic domain A2cp1_1355 PF01875 Memo-like protein A2cp1_1356 PF01627 Hpt domain A2cp1_1356 PF00072 Response regulator receiver domain A2cp1_1356 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1359 PF01966 HD domain A2cp1_1359 PF13286 Phosphohydrolase-associated domain A2cp1_1361 PF00012 Hsp70 protein A2cp1_1362 PF01556 DnaJ C terminal domain A2cp1_1362 PF00226 DnaJ domain A2cp1_1362 PF00684 DnaJ central domain A2cp1_1364 PF07724 AAA domain (Cdc48 subfamily) A2cp1_1364 PF06689 ClpX C4-type zinc finger A2cp1_1364 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_1365 PF00491 Arginase family A2cp1_1366 PF02082 Transcriptional regulator A2cp1_1367 PF02811 PHP domain A2cp1_1368 PF00361 Proton-conducting membrane transporter A2cp1_1369 PF00361 Proton-conducting membrane transporter A2cp1_1370 PF00361 Proton-conducting membrane transporter A2cp1_1370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A2cp1_1371 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A2cp1_1372 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A2cp1_1373 PF12838 4Fe-4S dicluster domain A2cp1_1374 PF00146 NADH dehydrogenase A2cp1_1375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A2cp1_1376 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A2cp1_1377 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A2cp1_1378 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A2cp1_1379 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 A2cp1_1380 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A2cp1_1381 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit A2cp1_1382 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A2cp1_1383 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal A2cp1_1383 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A2cp1_1383 PF00384 Molybdopterin oxidoreductase A2cp1_1384 PF00146 NADH dehydrogenase A2cp1_1385 PF00037 4Fe-4S binding domain A2cp1_1388 PF07690 Major Facilitator Superfamily A2cp1_1389 PF14716 Helix-hairpin-helix domain A2cp1_1389 PF14791 DNA polymerase beta thumb A2cp1_1389 PF02811 PHP domain A2cp1_1391 PF00994 Probable molybdopterin binding domain A2cp1_1395 PF01258 Prokaryotic dksA/traR C4-type zinc finger A2cp1_1398 PF01910 Thiamine-binding protein A2cp1_1400 PF13291 ACT domain A2cp1_1400 PF04607 Region found in RelA / SpoT proteins A2cp1_1400 PF02824 TGS domain A2cp1_1401 PF01042 Endoribonuclease L-PSP A2cp1_1402 PF12544 Lysine-2,3-aminomutase A2cp1_1402 PF04055 Radical SAM superfamily A2cp1_1403 PF12544 Lysine-2,3-aminomutase A2cp1_1403 PF04055 Radical SAM superfamily A2cp1_1404 PF09335 SNARE associated Golgi protein A2cp1_1405 PF08486 Stage II sporulation protein A2cp1_1406 PF02547 Queuosine biosynthesis protein A2cp1_1408 PF01702 Queuine tRNA-ribosyltransferase A2cp1_1409 PF02699 Preprotein translocase subunit A2cp1_1410 PF07549 SecD/SecF GG Motif A2cp1_1410 PF02355 Protein export membrane protein A2cp1_1411 PF07549 SecD/SecF GG Motif A2cp1_1411 PF02355 Protein export membrane protein A2cp1_1413 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1413 PF00072 Response regulator receiver domain A2cp1_1415 PF01368 DHH family A2cp1_1415 PF02272 DHHA1 domain A2cp1_1415 PF17768 RecJ OB domain A2cp1_1415 PF10141 Single-strand DNA-specific exonuclease, C terminal domain A2cp1_1416 PF00107 Zinc-binding dehydrogenase A2cp1_1416 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_1418 PF02938 GAD domain A2cp1_1418 PF00152 tRNA synthetases class II (D, K and N) A2cp1_1418 PF01336 OB-fold nucleic acid binding domain A2cp1_1419 PF04324 BFD-like [2Fe-2S] binding domain A2cp1_1419 PF01266 FAD dependent oxidoreductase A2cp1_1424 PF00781 Diacylglycerol kinase catalytic domain A2cp1_1426 PF00271 Helicase conserved C-terminal domain A2cp1_1426 PF00176 SNF2 family N-terminal domain A2cp1_1427 PF05193 Peptidase M16 inactive domain A2cp1_1427 PF00675 Insulinase (Peptidase family M16) A2cp1_1431 PF00210 Ferritin-like domain A2cp1_1433 PF05690 Thiazole biosynthesis protein ThiG A2cp1_1435 PF02581 Thiamine monophosphate synthase A2cp1_1436 PF01209 ubiE/COQ5 methyltransferase family A2cp1_1439 PF13361 UvrD-like helicase C-terminal domain A2cp1_1439 PF00580 UvrD/REP helicase N-terminal domain A2cp1_1439 PF12705 PD-(D/E)XK nuclease superfamily A2cp1_1441 PF01791 DeoC/LacD family aldolase A2cp1_1449 PF01168 Alanine racemase, N-terminal domain A2cp1_1450 PF02545 Maf-like protein A2cp1_1451 PF09312 SurA N-terminal domain A2cp1_1451 PF00639 PPIC-type PPIASE domain A2cp1_1454 PF00905 Penicillin binding protein transpeptidase domain A2cp1_1454 PF03717 Penicillin-binding Protein dimerisation domain A2cp1_1455 PF01098 Cell cycle protein A2cp1_1456 PF00085 Thioredoxin A2cp1_1459 PF01488 Shikimate / quinate 5-dehydrogenase A2cp1_1459 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A2cp1_1459 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A2cp1_1460 PF03900 Porphobilinogen deaminase, C-terminal domain A2cp1_1460 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain A2cp1_1463 PF01142 tRNA pseudouridine synthase D (TruD) A2cp1_1464 PF02416 mttA/Hcf106 family A2cp1_1467 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A2cp1_1467 PF07733 Bacterial DNA polymerase III alpha NTPase domain A2cp1_1467 PF14579 Helix-hairpin-helix motif A2cp1_1467 PF02811 PHP domain A2cp1_1471 PF02867 Ribonucleotide reductase, barrel domain A2cp1_1471 PF03477 ATP cone domain A2cp1_1471 PF00317 Ribonucleotide reductase, all-alpha domain A2cp1_1474 PF14748 Pyrroline-5-carboxylate reductase dimerisation A2cp1_1474 PF03807 NADP oxidoreductase coenzyme F420-dependent A2cp1_1475 PF01266 FAD dependent oxidoreductase A2cp1_1476 PF17806 Sarcosine oxidase A3 domain A2cp1_1476 PF08669 Glycine cleavage T-protein C-terminal barrel domain A2cp1_1476 PF01571 Aminomethyltransferase folate-binding domain A2cp1_1476 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_1479 PF01523 Putative modulator of DNA gyrase A2cp1_1480 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A2cp1_1480 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A2cp1_1480 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A2cp1_1484 PF08308 PEGA domain A2cp1_1484 PF00069 Protein kinase domain A2cp1_1486 PF04545 Sigma-70, region 4 A2cp1_1486 PF00140 Sigma-70 factor, region 1.2 A2cp1_1486 PF04539 Sigma-70 region 3 A2cp1_1486 PF04542 Sigma-70 region 2 A2cp1_1487 PF01808 AICARFT/IMPCHase bienzyme A2cp1_1487 PF02142 MGS-like domain A2cp1_1488 PF02844 Phosphoribosylglycinamide synthetase, N domain A2cp1_1488 PF02843 Phosphoribosylglycinamide synthetase, C domain A2cp1_1488 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain A2cp1_1489 PF00731 AIR carboxylase A2cp1_1493 PF01061 ABC-2 type transporter A2cp1_1494 PF00005 ABC transporter A2cp1_1497 PF00535 Glycosyl transferase family 2 A2cp1_1500 PF02397 Bacterial sugar transferase A2cp1_1501 PF01300 Telomere recombination A2cp1_1503 PF00490 Delta-aminolevulinic acid dehydratase A2cp1_1506 PF01820 D-ala D-ala ligase N-terminus A2cp1_1506 PF07478 D-ala D-ala ligase C-terminus A2cp1_1507 PF03576 Peptidase family S58 A2cp1_1512 PF00665 Integrase core domain A2cp1_1513 PF01695 IstB-like ATP binding protein A2cp1_1514 PF07689 KaiB domain A2cp1_1514 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1515 PF00072 Response regulator receiver domain A2cp1_1515 PF01339 CheB methylesterase A2cp1_1516 PF03466 LysR substrate binding domain A2cp1_1516 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1517 PF00676 Dehydrogenase E1 component A2cp1_1521 PF04362 Bacterial Fe(2+) trafficking A2cp1_1523 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1523 PF00072 Response regulator receiver domain A2cp1_1524 PF03453 MoeA N-terminal region (domain I and II) A2cp1_1524 PF03454 MoeA C-terminal region (domain IV) A2cp1_1524 PF00994 Probable molybdopterin binding domain A2cp1_1526 PF00773 RNB domain A2cp1_1526 PF00575 S1 RNA binding domain A2cp1_1526 PF08206 Ribonuclease B OB domain A2cp1_1526 PF08461 Ribonuclease R winged-helix domain A2cp1_1526 PF17876 Cold shock domain A2cp1_1528 PF01925 Sulfite exporter TauE/SafE A2cp1_1529 PF00571 CBS domain A2cp1_1530 PF00005 ABC transporter A2cp1_1531 PF12399 Branched-chain amino acid ATP-binding cassette transporter A2cp1_1531 PF00005 ABC transporter A2cp1_1532 PF11862 Domain of unknown function (DUF3382) A2cp1_1532 PF02653 Branched-chain amino acid transport system / permease component A2cp1_1533 PF02653 Branched-chain amino acid transport system / permease component A2cp1_1536 PF00488 MutS domain V A2cp1_1536 PF01713 Smr domain A2cp1_1540 PF13439 Glycosyltransferase Family 4 A2cp1_1541 PF01522 Polysaccharide deacetylase A2cp1_1543 PF04542 Sigma-70 region 2 A2cp1_1543 PF08281 Sigma-70, region 4 A2cp1_1547 PF07075 Protein of unknown function (DUF1343) A2cp1_1549 PF01467 Cytidylyltransferase-like A2cp1_1551 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_1551 PF07724 AAA domain (Cdc48 subfamily) A2cp1_1551 PF17871 AAA lid domain A2cp1_1551 PF02861 Clp amino terminal domain, pathogenicity island component A2cp1_1551 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_1552 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_1552 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A2cp1_1554 PF00033 Cytochrome b/b6/petB A2cp1_1556 PF18793 Nitrous oxide reductase propeller repeat 2 A2cp1_1556 PF18764 Nitrous oxide reductase propeller repeat A2cp1_1556 PF13473 Cupredoxin-like domain A2cp1_1559 PF00005 ABC transporter A2cp1_1559 PF13732 Domain of unknown function (DUF4162) A2cp1_1562 PF01734 Patatin-like phospholipase A2cp1_1565 PF00118 TCP-1/cpn60 chaperonin family A2cp1_1566 PF07694 5TMR of 5TMR-LYT A2cp1_1566 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_1568 PF00072 Response regulator receiver domain A2cp1_1568 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1569 PF10458 Valyl tRNA synthetase tRNA binding arm A2cp1_1569 PF08264 Anticodon-binding domain of tRNA A2cp1_1569 PF00133 tRNA synthetases class I (I, L, M and V) A2cp1_1570 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain A2cp1_1570 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain A2cp1_1571 PF08279 HTH domain A2cp1_1571 PF02237 Biotin protein ligase C terminal domain A2cp1_1571 PF03099 Biotin/lipoate A/B protein ligase family A2cp1_1572 PF03309 Type III pantothenate kinase A2cp1_1575 PF03023 Lipid II flippase MurJ A2cp1_1579 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1579 PF00072 Response regulator receiver domain A2cp1_1581 PF08281 Sigma-70, region 4 A2cp1_1581 PF04542 Sigma-70 region 2 A2cp1_1583 PF10672 S-adenosylmethionine-dependent methyltransferase A2cp1_1583 PF17785 PUA-like domain A2cp1_1587 PF02441 Flavoprotein A2cp1_1587 PF04127 DNA / pantothenate metabolism flavoprotein A2cp1_1589 PF03167 Uracil DNA glycosylase superfamily A2cp1_1591 PF01145 SPFH domain / Band 7 family A2cp1_1591 PF16200 C-terminal region of band_7 A2cp1_1593 PF01112 Asparaginase A2cp1_1594 PF00108 Thiolase, N-terminal domain A2cp1_1594 PF02803 Thiolase, C-terminal domain A2cp1_1595 PF01144 Coenzyme A transferase A2cp1_1596 PF01144 Coenzyme A transferase A2cp1_1599 PF01938 TRAM domain A2cp1_1599 PF05958 tRNA (Uracil-5-)-methyltransferase A2cp1_1600 PF00501 AMP-binding enzyme A2cp1_1605 PF02472 Biopolymer transport protein ExbD/TolR A2cp1_1606 PF01618 MotA/TolQ/ExbB proton channel family A2cp1_1607 PF01435 Peptidase family M48 A2cp1_1609 PF04055 Radical SAM superfamily A2cp1_1609 PF00919 Uncharacterized protein family UPF0004 A2cp1_1609 PF01938 TRAM domain A2cp1_1611 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_1613 PF09335 SNARE associated Golgi protein A2cp1_1614 PF00012 Hsp70 protein A2cp1_1615 PF00478 IMP dehydrogenase / GMP reductase domain A2cp1_1615 PF00571 CBS domain A2cp1_1616 PF00117 Glutamine amidotransferase class-I A2cp1_1616 PF00958 GMP synthase C terminal domain A2cp1_1619 PF00501 AMP-binding enzyme A2cp1_1620 PF00072 Response regulator receiver domain A2cp1_1620 PF00158 Sigma-54 interaction domain A2cp1_1622 PF02515 CoA-transferase family III A2cp1_1626 PF00005 ABC transporter A2cp1_1628 PF04474 Protein of unknown function (DUF554) A2cp1_1631 PF13649 Methyltransferase domain A2cp1_1632 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_1633 PF00155 Aminotransferase class I and II A2cp1_1638 PF00174 Oxidoreductase molybdopterin binding domain A2cp1_1640 PF00106 short chain dehydrogenase A2cp1_1641 PF12706 Beta-lactamase superfamily domain A2cp1_1642 PF01597 Glycine cleavage H-protein A2cp1_1643 PF00106 short chain dehydrogenase A2cp1_1644 PF00202 Aminotransferase class-III A2cp1_1646 PF01568 Molydopterin dinucleotide binding domain A2cp1_1646 PF00384 Molybdopterin oxidoreductase A2cp1_1654 PF06441 Epoxide hydrolase N terminus A2cp1_1660 PF00679 Elongation factor G C-terminus A2cp1_1660 PF14492 Elongation Factor G, domain II A2cp1_1660 PF03764 Elongation factor G, domain IV A2cp1_1660 PF00009 Elongation factor Tu GTP binding domain A2cp1_1660 PF03144 Elongation factor Tu domain 2 A2cp1_1662 PF03734 L,D-transpeptidase catalytic domain A2cp1_1665 PF00174 Oxidoreductase molybdopterin binding domain A2cp1_1666 PF00034 Cytochrome c A2cp1_1672 PF00149 Calcineurin-like phosphoesterase A2cp1_1672 PF02872 5'-nucleotidase, C-terminal domain A2cp1_1673 PF00753 Metallo-beta-lactamase superfamily A2cp1_1673 PF16123 Hydroxyacylglutathione hydrolase C-terminus A2cp1_1676 PF00116 Cytochrome C oxidase subunit II, periplasmic domain A2cp1_1676 PF02790 Cytochrome C oxidase subunit II, transmembrane domain A2cp1_1677 PF00510 Cytochrome c oxidase subunit III A2cp1_1677 PF00115 Cytochrome C and Quinol oxidase polypeptide I A2cp1_1678 PF00510 Cytochrome c oxidase subunit III A2cp1_1681 PF02558 Ketopantoate reductase PanE/ApbA A2cp1_1681 PF08546 Ketopantoate reductase PanE/ApbA C terminal A2cp1_1683 PF01209 ubiE/COQ5 methyltransferase family A2cp1_1684 PF12833 Helix-turn-helix domain A2cp1_1684 PF12852 Cupin A2cp1_1689 PF00892 EamA-like transporter family A2cp1_1690 PF00012 Hsp70 protein A2cp1_1693 PF09924 Uncharacterised conserved protein (DUF2156) A2cp1_1693 PF03706 Lysylphosphatidylglycerol synthase TM region A2cp1_1695 PF00561 alpha/beta hydrolase fold A2cp1_1696 PF04542 Sigma-70 region 2 A2cp1_1696 PF08281 Sigma-70, region 4 A2cp1_1697 PF03401 Tripartite tricarboxylate transporter family receptor A2cp1_1698 PF01970 Tripartite tricarboxylate transporter TctA family A2cp1_1702 PF00171 Aldehyde dehydrogenase family A2cp1_1707 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1707 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1708 PF00158 Sigma-54 interaction domain A2cp1_1708 PF00072 Response regulator receiver domain A2cp1_1708 PF02954 Bacterial regulatory protein, Fis family A2cp1_1710 PF13533 Biotin-lipoyl like A2cp1_1711 PF00873 AcrB/AcrD/AcrF family A2cp1_1714 PF00155 Aminotransferase class I and II A2cp1_1714 PF00392 Bacterial regulatory proteins, gntR family A2cp1_1717 PF01979 Amidohydrolase family A2cp1_1721 PF03971 Monomeric isocitrate dehydrogenase A2cp1_1722 PF00056 lactate/malate dehydrogenase, NAD binding domain A2cp1_1722 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A2cp1_1726 PF00463 Isocitrate lyase family A2cp1_1727 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A2cp1_1727 PF00476 DNA polymerase family A A2cp1_1727 PF01612 3'-5' exonuclease A2cp1_1727 PF01367 5'-3' exonuclease, C-terminal SAM fold A2cp1_1729 PF00909 Ammonium Transporter Family A2cp1_1730 PF00543 Nitrogen regulatory protein P-II A2cp1_1732 PF00881 Nitroreductase family A2cp1_1733 PF03466 LysR substrate binding domain A2cp1_1733 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1734 PF07690 Major Facilitator Superfamily A2cp1_1735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1735 PF03466 LysR substrate binding domain A2cp1_1737 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1737 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1739 PF00534 Glycosyl transferases group 1 A2cp1_1740 PF03781 Sulfatase-modifying factor enzyme 1 A2cp1_1740 PF12867 DinB superfamily A2cp1_1741 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A2cp1_1741 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_1741 PF00403 Heavy-metal-associated domain A2cp1_1742 PF05726 Pirin C-terminal cupin domain A2cp1_1742 PF02678 Pirin A2cp1_1745 PF03466 LysR substrate binding domain A2cp1_1745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1746 PF00085 Thioredoxin A2cp1_1747 PF00072 Response regulator receiver domain A2cp1_1747 PF08448 PAS fold A2cp1_1747 PF13188 PAS domain A2cp1_1747 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1751 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1751 PF03466 LysR substrate binding domain A2cp1_1754 PF01578 Cytochrome C assembly protein A2cp1_1755 PF02915 Rubrerythrin A2cp1_1756 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1756 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1762 PF00672 HAMP domain A2cp1_1762 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_1762 PF16591 Helical bimodular sensor domain A2cp1_1763 PF01584 CheW-like domain A2cp1_1765 PF01709 Transcriptional regulator A2cp1_1766 PF00892 EamA-like transporter family A2cp1_1767 PF00005 ABC transporter A2cp1_1768 PF12399 Branched-chain amino acid ATP-binding cassette transporter A2cp1_1768 PF00005 ABC transporter A2cp1_1770 PF13458 Periplasmic binding protein A2cp1_1771 PF01925 Sulfite exporter TauE/SafE A2cp1_1773 PF02621 Menaquinone biosynthesis A2cp1_1775 PF07690 Major Facilitator Superfamily A2cp1_1776 PF02613 Nitrate reductase delta subunit A2cp1_1776 PF00384 Molybdopterin oxidoreductase A2cp1_1776 PF02665 Nitrate reductase gamma subunit A2cp1_1778 PF13247 4Fe-4S dicluster domain A2cp1_1778 PF14711 Respiratory nitrate reductase beta C-terminal A2cp1_1779 PF01568 Molydopterin dinucleotide binding domain A2cp1_1779 PF14710 Respiratory nitrate reductase alpha N-terminal A2cp1_1779 PF00384 Molybdopterin oxidoreductase A2cp1_1781 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1781 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1781 PF00989 PAS fold A2cp1_1790 PF02558 Ketopantoate reductase PanE/ApbA A2cp1_1790 PF08546 Ketopantoate reductase PanE/ApbA C terminal A2cp1_1792 PF12848 ABC transporter A2cp1_1792 PF00005 ABC transporter A2cp1_1795 PF03352 Methyladenine glycosylase A2cp1_1796 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_1797 PF13247 4Fe-4S dicluster domain A2cp1_1799 PF00384 Molybdopterin oxidoreductase A2cp1_1799 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1799 PF01568 Molydopterin dinucleotide binding domain A2cp1_1800 PF03605 Anaerobic c4-dicarboxylate membrane transporter A2cp1_1801 PF02954 Bacterial regulatory protein, Fis family A2cp1_1801 PF00158 Sigma-54 interaction domain A2cp1_1801 PF00072 Response regulator receiver domain A2cp1_1802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1802 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1802 PF00497 Bacterial extracellular solute-binding proteins, family 3 A2cp1_1811 PF02683 Cytochrome C biogenesis protein transmembrane region A2cp1_1812 PF04542 Sigma-70 region 2 A2cp1_1812 PF08281 Sigma-70, region 4 A2cp1_1814 PF07690 Major Facilitator Superfamily A2cp1_1815 PF00710 Asparaginase, N-terminal A2cp1_1815 PF17763 Glutaminase/Asparaginase C-terminal domain A2cp1_1819 PF02653 Branched-chain amino acid transport system / permease component A2cp1_1821 PF00005 ABC transporter A2cp1_1822 PF12399 Branched-chain amino acid ATP-binding cassette transporter A2cp1_1822 PF00005 ABC transporter A2cp1_1824 PF04405 Domain of Unknown function (DUF542) A2cp1_1824 PF01814 Hemerythrin HHE cation binding domain A2cp1_1825 PF02954 Bacterial regulatory protein, Fis family A2cp1_1825 PF00158 Sigma-54 interaction domain A2cp1_1825 PF00072 Response regulator receiver domain A2cp1_1826 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A2cp1_1826 PF02817 e3 binding domain A2cp1_1826 PF00364 Biotin-requiring enzyme A2cp1_1827 PF17831 Pyruvate dehydrogenase E1 component middle domain A2cp1_1827 PF00456 Transketolase, thiamine diphosphate binding domain A2cp1_1833 PF00069 Protein kinase domain A2cp1_1836 PF04542 Sigma-70 region 2 A2cp1_1836 PF08281 Sigma-70, region 4 A2cp1_1837 PF00248 Aldo/keto reductase family A2cp1_1838 PF01272 Transcription elongation factor, GreA/GreB, C-term A2cp1_1838 PF03449 Transcription elongation factor, N-terminal A2cp1_1842 PF09269 Domain of unknown function (DUF1967) A2cp1_1842 PF01926 50S ribosome-binding GTPase A2cp1_1842 PF01018 GTP1/OBG A2cp1_1844 PF16658 Class II release factor RF3, C-terminal domain A2cp1_1844 PF00009 Elongation factor Tu GTP binding domain A2cp1_1844 PF03144 Elongation factor Tu domain 2 A2cp1_1845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A2cp1_1847 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A2cp1_1847 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A2cp1_1848 PF00793 DAHP synthetase I family A2cp1_1849 PF13649 Methyltransferase domain A2cp1_1850 PF16916 Dimerisation domain of Zinc Transporter A2cp1_1850 PF01545 Cation efflux family A2cp1_1853 PF01578 Cytochrome C assembly protein A2cp1_1854 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1854 PF00497 Bacterial extracellular solute-binding proteins, family 3 A2cp1_1854 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1855 PF00158 Sigma-54 interaction domain A2cp1_1855 PF02954 Bacterial regulatory protein, Fis family A2cp1_1855 PF00072 Response regulator receiver domain A2cp1_1856 PF00375 Sodium:dicarboxylate symporter family A2cp1_1861 PF14537 Cytochrome c3 A2cp1_1861 PF00890 FAD binding domain A2cp1_1862 PF00107 Zinc-binding dehydrogenase A2cp1_1862 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_1863 PF00155 Aminotransferase class I and II A2cp1_1865 PF00270 DEAD/DEAH box helicase A2cp1_1865 PF08494 DEAD/H associated A2cp1_1865 PF00271 Helicase conserved C-terminal domain A2cp1_1866 PF06827 Zinc finger found in FPG and IleRS A2cp1_1866 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A2cp1_1866 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A2cp1_1867 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1867 PF00072 Response regulator receiver domain A2cp1_1867 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1867 PF09456 RcsC Alpha-Beta-Loop (ABL) A2cp1_1869 PF13247 4Fe-4S dicluster domain A2cp1_1870 PF04216 Protein involved in formate dehydrogenase formation A2cp1_1871 PF00365 Phosphofructokinase A2cp1_1872 PF01053 Cys/Met metabolism PLP-dependent enzyme A2cp1_1876 PF03641 Possible lysine decarboxylase A2cp1_1877 PF01546 Peptidase family M20/M25/M40 A2cp1_1877 PF07687 Peptidase dimerisation domain A2cp1_1879 PF00075 RNase H A2cp1_1880 PF00248 Aldo/keto reductase family A2cp1_1882 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A2cp1_1883 PF04402 Protein of unknown function (DUF541) A2cp1_1885 PF08502 LeuA allosteric (dimerisation) domain A2cp1_1885 PF00682 HMGL-like A2cp1_1886 PF00180 Isocitrate/isopropylmalate dehydrogenase A2cp1_1887 PF01757 Acyltransferase family A2cp1_1888 PF05683 Fumarase C-terminus A2cp1_1888 PF05681 Fumarate hydratase (Fumerase) A2cp1_1889 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain A2cp1_1889 PF06974 Protein of unknown function (DUF1298) A2cp1_1895 PF12848 ABC transporter A2cp1_1895 PF16326 ABC transporter C-terminal domain A2cp1_1895 PF00005 ABC transporter A2cp1_1898 PF00009 Elongation factor Tu GTP binding domain A2cp1_1898 PF03144 Elongation factor Tu domain 2 A2cp1_1898 PF03764 Elongation factor G, domain IV A2cp1_1898 PF14492 Elongation Factor G, domain II A2cp1_1898 PF00679 Elongation factor G C-terminus A2cp1_1900 PF13396 Phospholipase_D-nuclease N-terminal A2cp1_1900 PF13091 PLD-like domain A2cp1_1902 PF08439 Oligopeptidase F A2cp1_1902 PF01432 Peptidase family M3 A2cp1_1906 PF02222 ATP-grasp domain A2cp1_1914 PF00264 Common central domain of tyrosinase A2cp1_1915 PF08543 Phosphomethylpyrimidine kinase A2cp1_1917 PF01914 MarC family integral membrane protein A2cp1_1920 PF00005 ABC transporter A2cp1_1921 PF12704 MacB-like periplasmic core domain A2cp1_1921 PF00005 ABC transporter A2cp1_1921 PF02687 FtsX-like permease family A2cp1_1924 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) A2cp1_1926 PF00207 Alpha-2-macroglobulin family A2cp1_1926 PF01835 MG2 domain A2cp1_1926 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain A2cp1_1926 PF07703 Alpha-2-macroglobulin bait region domain A2cp1_1927 PF06832 Penicillin-Binding Protein C-terminus Family A2cp1_1927 PF00912 Transglycosylase A2cp1_1927 PF00905 Penicillin binding protein transpeptidase domain A2cp1_1932 PF03170 Bacterial cellulose synthase subunit A2cp1_1932 PF07238 PilZ domain A2cp1_1932 PF00535 Glycosyl transferase family 2 A2cp1_1934 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A2cp1_1934 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A2cp1_1934 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A2cp1_1934 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A2cp1_1935 PF00248 Aldo/keto reductase family A2cp1_1941 PF00873 AcrB/AcrD/AcrF family A2cp1_1942 PF13533 Biotin-lipoyl like A2cp1_1944 PF00462 Glutaredoxin A2cp1_1945 PF01435 Peptidase family M48 A2cp1_1946 PF03466 LysR substrate binding domain A2cp1_1946 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_1947 PF03741 Integral membrane protein TerC family A2cp1_1949 PF01218 Coproporphyrinogen III oxidase A2cp1_1951 PF01842 ACT domain A2cp1_1951 PF00551 Formyl transferase A2cp1_1952 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1952 PF13426 PAS domain A2cp1_1952 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1952 PF13188 PAS domain A2cp1_1952 PF00989 PAS fold A2cp1_1954 PF00158 Sigma-54 interaction domain A2cp1_1954 PF00072 Response regulator receiver domain A2cp1_1954 PF02954 Bacterial regulatory protein, Fis family A2cp1_1956 PF13247 4Fe-4S dicluster domain A2cp1_1957 PF03916 Polysulphide reductase, NrfD A2cp1_1958 PF01597 Glycine cleavage H-protein A2cp1_1965 PF17200 Single Cache domain 2 A2cp1_1965 PF07730 Histidine kinase A2cp1_1966 PF00072 Response regulator receiver domain A2cp1_1966 PF00196 Bacterial regulatory proteins, luxR family A2cp1_1969 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain A2cp1_1969 PF01488 Shikimate / quinate 5-dehydrogenase A2cp1_1969 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain A2cp1_1970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_1970 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_1972 PF04542 Sigma-70 region 2 A2cp1_1972 PF04545 Sigma-70, region 4 A2cp1_1972 PF00140 Sigma-70 factor, region 1.2 A2cp1_1974 PF00072 Response regulator receiver domain A2cp1_1974 PF00486 Transcriptional regulatory protein, C terminal A2cp1_1975 PF00297 Ribosomal protein L3 A2cp1_1979 PF16123 Hydroxyacylglutathione hydrolase C-terminus A2cp1_1979 PF00753 Metallo-beta-lactamase superfamily A2cp1_1980 PF01066 CDP-alcohol phosphatidyltransferase A2cp1_1981 PF03129 Anticodon binding domain A2cp1_1981 PF02824 TGS domain A2cp1_1981 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A2cp1_1981 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A2cp1_1982 PF00682 HMGL-like A2cp1_1982 PF08502 LeuA allosteric (dimerisation) domain A2cp1_1983 PF00330 Aconitase family (aconitate hydratase) A2cp1_1984 PF00694 Aconitase C-terminal domain A2cp1_1985 PF00205 Thiamine pyrophosphate enzyme, central domain A2cp1_1985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_1985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain A2cp1_1986 PF01842 ACT domain A2cp1_1986 PF10369 Small subunit of acetolactate synthase A2cp1_1987 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain A2cp1_1987 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain A2cp1_1988 PF05198 Translation initiation factor IF-3, N-terminal domain A2cp1_1988 PF00707 Translation initiation factor IF-3, C-terminal domain A2cp1_1989 PF01632 Ribosomal protein L35 A2cp1_1990 PF00453 Ribosomal protein L20 A2cp1_1991 PF01409 tRNA synthetases class II core domain (F) A2cp1_1991 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A2cp1_1992 PF01588 Putative tRNA binding domain A2cp1_1992 PF03147 Ferredoxin-fold anticodon binding domain A2cp1_1992 PF03484 tRNA synthetase B5 domain A2cp1_1992 PF03483 B3/4 domain A2cp1_1992 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain A2cp1_1994 PF00216 Bacterial DNA-binding protein A2cp1_1996 PF00355 Rieske [2Fe-2S] domain A2cp1_1997 PF01242 6-pyruvoyl tetrahydropterin synthase A2cp1_1998 PF01227 GTP cyclohydrolase I A2cp1_2000 PF02913 FAD linked oxidases, C-terminal domain A2cp1_2000 PF01565 FAD binding domain A2cp1_2001 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A2cp1_2001 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A2cp1_2001 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A2cp1_2002 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_2004 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A2cp1_2004 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A2cp1_2004 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A2cp1_2005 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_2009 PF16363 GDP-mannose 4,6 dehydratase A2cp1_2010 PF16363 GDP-mannose 4,6 dehydratase A2cp1_2011 PF00912 Transglycosylase A2cp1_2012 PF02777 Iron/manganese superoxide dismutases, C-terminal domain A2cp1_2012 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain A2cp1_2013 PF14815 NUDIX domain A2cp1_2013 PF00633 Helix-hairpin-helix motif A2cp1_2013 PF00730 HhH-GPD superfamily base excision DNA repair protein A2cp1_2014 PF00164 Ribosomal protein S12/S23 A2cp1_2015 PF00177 Ribosomal protein S7p/S5e A2cp1_2016 PF00679 Elongation factor G C-terminus A2cp1_2016 PF03764 Elongation factor G, domain IV A2cp1_2016 PF00009 Elongation factor Tu GTP binding domain A2cp1_2016 PF03144 Elongation factor Tu domain 2 A2cp1_2016 PF14492 Elongation Factor G, domain II A2cp1_2017 PF03144 Elongation factor Tu domain 2 A2cp1_2017 PF00009 Elongation factor Tu GTP binding domain A2cp1_2017 PF03143 Elongation factor Tu C-terminal domain A2cp1_2018 PF00338 Ribosomal protein S10p/S20e A2cp1_2019 PF00573 Ribosomal protein L4/L1 family A2cp1_2020 PF00276 Ribosomal protein L23 A2cp1_2021 PF00181 Ribosomal Proteins L2, RNA binding domain A2cp1_2021 PF03947 Ribosomal Proteins L2, C-terminal domain A2cp1_2022 PF00203 Ribosomal protein S19 A2cp1_2023 PF00237 Ribosomal protein L22p/L17e A2cp1_2024 PF07650 KH domain A2cp1_2024 PF00189 Ribosomal protein S3, C-terminal domain A2cp1_2025 PF00252 Ribosomal protein L16p/L10e A2cp1_2026 PF00831 Ribosomal L29 protein A2cp1_2027 PF00366 Ribosomal protein S17 A2cp1_2028 PF00238 Ribosomal protein L14p/L23e A2cp1_2029 PF00467 KOW motif A2cp1_2029 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 A2cp1_2030 PF00281 Ribosomal protein L5 A2cp1_2030 PF00673 ribosomal L5P family C-terminus A2cp1_2031 PF00253 Ribosomal protein S14p/S29e A2cp1_2032 PF00410 Ribosomal protein S8 A2cp1_2033 PF00347 Ribosomal protein L6 A2cp1_2034 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast A2cp1_2035 PF00333 Ribosomal protein S5, N-terminal domain A2cp1_2035 PF03719 Ribosomal protein S5, C-terminal domain A2cp1_2036 PF00327 Ribosomal protein L30p/L7e A2cp1_2037 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A A2cp1_2038 PF00344 SecY translocase A2cp1_2039 PF05191 Adenylate kinase, active site lid A2cp1_2040 PF00557 Metallopeptidase family M24 A2cp1_2041 PF00444 Ribosomal protein L36 A2cp1_2042 PF00416 Ribosomal protein S13/S18 A2cp1_2043 PF00411 Ribosomal protein S11 A2cp1_2044 PF00163 Ribosomal protein S4/S9 N-terminal domain A2cp1_2044 PF01479 S4 domain A2cp1_2045 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain A2cp1_2045 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain A2cp1_2045 PF01000 RNA polymerase Rpb3/RpoA insert domain A2cp1_2046 PF01196 Ribosomal protein L17 A2cp1_2048 PF00886 Ribosomal protein S16 A2cp1_2050 PF01782 RimM N-terminal domain A2cp1_2050 PF05239 PRC-barrel domain A2cp1_2051 PF01746 tRNA (Guanine-1)-methyltransferase A2cp1_2052 PF01245 Ribosomal protein L19 A2cp1_2054 PF02021 Uncharacterised protein family UPF0102 A2cp1_2055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A2cp1_2056 PF00072 Response regulator receiver domain A2cp1_2056 PF02954 Bacterial regulatory protein, Fis family A2cp1_2056 PF00158 Sigma-54 interaction domain A2cp1_2057 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2057 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2057 PF00989 PAS fold A2cp1_2058 PF14718 Soluble lytic murein transglycosylase L domain A2cp1_2058 PF01464 Transglycosylase SLT domain A2cp1_2060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain A2cp1_2063 PF00849 RNA pseudouridylate synthase A2cp1_2066 PF01209 ubiE/COQ5 methyltransferase family A2cp1_2067 PF00005 ABC transporter A2cp1_2068 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A2cp1_2068 PF17944 Arginine decarboxylase C-terminal helical extension A2cp1_2068 PF17810 Arginine decarboxylase helical bundle domain A2cp1_2072 PF01625 Peptide methionine sulfoxide reductase A2cp1_2080 PF00849 RNA pseudouridylate synthase A2cp1_2082 PF02405 Permease MlaE A2cp1_2083 PF00005 ABC transporter A2cp1_2085 PF00578 AhpC/TSA family A2cp1_2086 PF03884 DNA gyrase inhibitor YacG A2cp1_2087 PF01842 ACT domain A2cp1_2087 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A2cp1_2087 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A2cp1_2094 PF00378 Enoyl-CoA hydratase/isomerase A2cp1_2095 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2098 PF02310 B12 binding domain A2cp1_2100 PF06463 Molybdenum Cofactor Synthesis C A2cp1_2100 PF04055 Radical SAM superfamily A2cp1_2101 PF01966 HD domain A2cp1_2101 PF00072 Response regulator receiver domain A2cp1_2102 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family A2cp1_2102 PF04055 Radical SAM superfamily A2cp1_2103 PF00676 Dehydrogenase E1 component A2cp1_2104 PF02780 Transketolase, C-terminal domain A2cp1_2104 PF02779 Transketolase, pyrimidine binding domain A2cp1_2105 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) A2cp1_2105 PF00364 Biotin-requiring enzyme A2cp1_2105 PF02817 e3 binding domain A2cp1_2106 PF01026 TatD related DNase A2cp1_2107 PF00899 ThiF family A2cp1_2108 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_2108 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A2cp1_2109 PF00293 NUDIX domain A2cp1_2109 PF03099 Biotin/lipoate A/B protein ligase family A2cp1_2110 PF07238 PilZ domain A2cp1_2110 PF00069 Protein kinase domain A2cp1_2111 PF03169 OPT oligopeptide transporter protein A2cp1_2115 PF00696 Amino acid kinase family A2cp1_2115 PF13840 ACT domain A2cp1_2116 PF00221 Aromatic amino acid lyase A2cp1_2117 PF16921 Tex protein YqgF-like domain A2cp1_2117 PF09371 Tex-like protein N-terminal domain A2cp1_2117 PF00575 S1 RNA binding domain A2cp1_2117 PF17674 HHH domain A2cp1_2122 PF13361 UvrD-like helicase C-terminal domain A2cp1_2122 PF00580 UvrD/REP helicase N-terminal domain A2cp1_2123 PF00012 Hsp70 protein A2cp1_2150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2150 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2150 PF07689 KaiB domain A2cp1_2152 PF13419 Haloacid dehalogenase-like hydrolase A2cp1_2153 PF00800 Prephenate dehydratase A2cp1_2153 PF01842 ACT domain A2cp1_2156 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain A2cp1_2156 PF00753 Metallo-beta-lactamase superfamily A2cp1_2156 PF10996 Beta-Casp domain A2cp1_2157 PF00293 NUDIX domain A2cp1_2158 PF01434 Peptidase family M41 A2cp1_2158 PF06480 FtsH Extracellular A2cp1_2158 PF17862 AAA+ lid domain A2cp1_2158 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_2160 PF01025 GrpE A2cp1_2161 PF13180 PDZ domain A2cp1_2166 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A2cp1_2166 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A2cp1_2171 PF17200 Single Cache domain 2 A2cp1_2171 PF07730 Histidine kinase A2cp1_2172 PF00072 Response regulator receiver domain A2cp1_2172 PF00196 Bacterial regulatory proteins, luxR family A2cp1_2173 PF03595 Voltage-dependent anion channel A2cp1_2175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2175 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2175 PF00497 Bacterial extracellular solute-binding proteins, family 3 A2cp1_2176 PF00072 Response regulator receiver domain A2cp1_2176 PF00158 Sigma-54 interaction domain A2cp1_2176 PF02954 Bacterial regulatory protein, Fis family A2cp1_2177 PF10415 Fumarase C C-terminus A2cp1_2177 PF00206 Lyase A2cp1_2178 PF03605 Anaerobic c4-dicarboxylate membrane transporter A2cp1_2179 PF13609 Gram-negative porin A2cp1_2188 PF00557 Metallopeptidase family M24 A2cp1_2189 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_2189 PF03466 LysR substrate binding domain A2cp1_2195 PF16916 Dimerisation domain of Zinc Transporter A2cp1_2195 PF01545 Cation efflux family A2cp1_2197 PF00005 ABC transporter A2cp1_2197 PF12857 TOBE-like domain A2cp1_2198 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_2199 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_2200 PF01507 Phosphoadenosine phosphosulfate reductase family A2cp1_2201 PF00009 Elongation factor Tu GTP binding domain A2cp1_2202 PF01507 Phosphoadenosine phosphosulfate reductase family A2cp1_2205 PF01467 Cytidylyltransferase-like A2cp1_2206 PF00155 Aminotransferase class I and II A2cp1_2208 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A2cp1_2208 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A2cp1_2208 PF02142 MGS-like domain A2cp1_2209 PF03449 Transcription elongation factor, N-terminal A2cp1_2209 PF01272 Transcription elongation factor, GreA/GreB, C-term A2cp1_2210 PF17191 RecG wedge domain A2cp1_2210 PF00271 Helicase conserved C-terminal domain A2cp1_2210 PF00270 DEAD/DEAH box helicase A2cp1_2213 PF00155 Aminotransferase class I and II A2cp1_2214 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_2216 PF02223 Thymidylate kinase A2cp1_2217 PF00994 Probable molybdopterin binding domain A2cp1_2217 PF02464 Competence-damaged protein A2cp1_2222 PF01553 Acyltransferase A2cp1_2223 PF01119 DNA mismatch repair protein, C-terminal domain A2cp1_2223 PF08676 MutL C terminal dimerisation domain A2cp1_2227 PF00072 Response regulator receiver domain A2cp1_2227 PF00158 Sigma-54 interaction domain A2cp1_2227 PF02954 Bacterial regulatory protein, Fis family A2cp1_2229 PF03793 PASTA domain A2cp1_2229 PF00069 Protein kinase domain A2cp1_2231 PF02190 ATP-dependent protease La (LON) substrate-binding domain A2cp1_2231 PF05362 Lon protease (S16) C-terminal proteolytic domain A2cp1_2231 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_2238 PF01726 LexA DNA binding domain A2cp1_2238 PF00717 Peptidase S24-like A2cp1_2240 PF03109 ABC1 family A2cp1_2242 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A2cp1_2242 PF13632 Glycosyl transferase family group 2 A2cp1_2247 PF05190 MutS family domain IV A2cp1_2247 PF01624 MutS domain I A2cp1_2247 PF05188 MutS domain II A2cp1_2247 PF05192 MutS domain III A2cp1_2247 PF00488 MutS domain V A2cp1_2249 PF14522 Cytochrome c7 and related cytochrome c A2cp1_2251 PF01520 N-acetylmuramoyl-L-alanine amidase A2cp1_2253 PF01909 Nucleotidyltransferase domain A2cp1_2253 PF01966 HD domain A2cp1_2253 PF08335 GlnD PII-uridylyltransferase A2cp1_2254 PF08443 RimK-like ATP-grasp domain A2cp1_2254 PF18030 RimK PreATP-grasp domain A2cp1_2257 PF01300 Telomere recombination A2cp1_2258 PF00589 Phage integrase family A2cp1_2258 PF02899 Phage integrase, N-terminal SAM-like domain A2cp1_2259 PF02163 Peptidase family M50 A2cp1_2260 PF00579 tRNA synthetases class I (W and Y) A2cp1_2261 PF02616 Segregation and condensation protein ScpA A2cp1_2262 PF04079 Segregation and condensation complex subunit ScpB A2cp1_2263 PF00849 RNA pseudouridylate synthase A2cp1_2263 PF01479 S4 domain A2cp1_2267 PF08281 Sigma-70, region 4 A2cp1_2267 PF04542 Sigma-70 region 2 A2cp1_2268 PF03600 Citrate transporter A2cp1_2269 PF01137 RNA 3'-terminal phosphate cyclase A2cp1_2269 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain A2cp1_2270 PF01544 CorA-like Mg2+ transporter protein A2cp1_2272 PF10609 NUBPL iron-transfer P-loop NTPase A2cp1_2272 PF01883 Iron-sulfur cluster assembly protein A2cp1_2278 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2278 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2279 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain A2cp1_2279 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain A2cp1_2280 PF00378 Enoyl-CoA hydratase/isomerase A2cp1_2281 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_2281 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_2281 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_2282 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_2282 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_2282 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_2283 PF00925 GTP cyclohydrolase II A2cp1_2283 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A2cp1_2284 PF13411 MerR HTH family regulatory protein A2cp1_2287 PF03264 NapC/NirT cytochrome c family, N-terminal region A2cp1_2289 PF00293 NUDIX domain A2cp1_2292 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal A2cp1_2292 PF01926 50S ribosome-binding GTPase A2cp1_2293 PF07650 KH domain A2cp1_2293 PF01926 50S ribosome-binding GTPase A2cp1_2294 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A2cp1_2295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A2cp1_2296 PF00035 Double-stranded RNA binding motif A2cp1_2296 PF14622 Ribonuclease-III-like A2cp1_2299 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_2299 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_2299 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_2300 PF01039 Carboxyl transferase domain A2cp1_2301 PF00378 Enoyl-CoA hydratase/isomerase A2cp1_2302 PF00682 HMGL-like A2cp1_2304 PF01964 Radical SAM ThiC family A2cp1_2305 PF03952 Enolase, N-terminal domain A2cp1_2305 PF00113 Enolase, C-terminal TIM barrel domain A2cp1_2308 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded A2cp1_2310 PF03447 Homoserine dehydrogenase, NAD binding domain A2cp1_2310 PF01842 ACT domain A2cp1_2310 PF00742 Homoserine dehydrogenase A2cp1_2317 PF04055 Radical SAM superfamily A2cp1_2318 PF01595 Cyclin M transmembrane N-terminal domain A2cp1_2318 PF03471 Transporter associated domain A2cp1_2318 PF00571 CBS domain A2cp1_2319 PF00334 Nucleoside diphosphate kinase A2cp1_2320 PF00549 CoA-ligase A2cp1_2320 PF02629 CoA binding domain A2cp1_2321 PF08442 ATP-grasp domain A2cp1_2321 PF00549 CoA-ligase A2cp1_2322 PF00056 lactate/malate dehydrogenase, NAD binding domain A2cp1_2322 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain A2cp1_2323 PF00180 Isocitrate/isopropylmalate dehydrogenase A2cp1_2324 PF04794 YdjC-like protein A2cp1_2325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2325 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2325 PF00989 PAS fold A2cp1_2326 PF02577 Bifunctional nuclease A2cp1_2328 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain A2cp1_2328 PF00117 Glutamine amidotransferase class-I A2cp1_2329 PF01979 Amidohydrolase family A2cp1_2330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A2cp1_2330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A2cp1_2331 PF00156 Phosphoribosyl transferase domain A2cp1_2333 PF10502 Signal peptidase, peptidase S26 A2cp1_2334 PF06421 GTP-binding protein LepA C-terminus A2cp1_2334 PF00009 Elongation factor Tu GTP binding domain A2cp1_2334 PF00679 Elongation factor G C-terminus A2cp1_2334 PF03144 Elongation factor Tu domain 2 A2cp1_2335 PF02867 Ribonucleotide reductase, barrel domain A2cp1_2335 PF08471 Class II vitamin B12-dependent ribonucleotide reductase A2cp1_2336 PF02811 PHP domain A2cp1_2336 PF14579 Helix-hairpin-helix motif A2cp1_2336 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A2cp1_2336 PF07733 Bacterial DNA polymerase III alpha NTPase domain A2cp1_2338 PF00154 recA bacterial DNA recombination protein A2cp1_2342 PF00085 Thioredoxin A2cp1_2343 PF00072 Response regulator receiver domain A2cp1_2344 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2344 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2348 PF01464 Transglycosylase SLT domain A2cp1_2348 PF14718 Soluble lytic murein transglycosylase L domain A2cp1_2350 PF04227 Indigoidine synthase A like protein A2cp1_2351 PF01553 Acyltransferase A2cp1_2353 PF00072 Response regulator receiver domain A2cp1_2353 PF00486 Transcriptional regulatory protein, C terminal A2cp1_2355 PF18269 T3SS EscN ATPase C-terminal domain A2cp1_2355 PF02874 ATP synthase alpha/beta family, beta-barrel domain A2cp1_2355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_2357 PF04542 Sigma-70 region 2 A2cp1_2357 PF00140 Sigma-70 factor, region 1.2 A2cp1_2357 PF04539 Sigma-70 region 3 A2cp1_2357 PF04545 Sigma-70, region 4 A2cp1_2358 PF04998 RNA polymerase Rpb1, domain 5 A2cp1_2358 PF05000 RNA polymerase Rpb1, domain 4 A2cp1_2358 PF04983 RNA polymerase Rpb1, domain 3 A2cp1_2358 PF04997 RNA polymerase Rpb1, domain 1 A2cp1_2358 PF00623 RNA polymerase Rpb1, domain 2 A2cp1_2359 PF04563 RNA polymerase beta subunit A2cp1_2359 PF04565 RNA polymerase Rpb2, domain 3 A2cp1_2359 PF10385 RNA polymerase beta subunit external 1 domain A2cp1_2359 PF00562 RNA polymerase Rpb2, domain 6 A2cp1_2359 PF04561 RNA polymerase Rpb2, domain 2 A2cp1_2359 PF04560 RNA polymerase Rpb2, domain 7 A2cp1_2360 PF16320 Ribosomal protein L7/L12 dimerisation domain A2cp1_2360 PF00542 Ribosomal protein L7/L12 C-terminal domain A2cp1_2361 PF00466 Ribosomal protein L10 A2cp1_2362 PF00687 Ribosomal protein L1p/L10e family A2cp1_2363 PF00298 Ribosomal protein L11, RNA binding domain A2cp1_2363 PF03946 Ribosomal protein L11, N-terminal domain A2cp1_2364 PF02357 Transcription termination factor nusG A2cp1_2364 PF00467 KOW motif A2cp1_2366 PF00471 Ribosomal protein L33 A2cp1_2367 PF03144 Elongation factor Tu domain 2 A2cp1_2367 PF03143 Elongation factor Tu C-terminal domain A2cp1_2367 PF00009 Elongation factor Tu GTP binding domain A2cp1_2368 PF00588 SpoU rRNA Methylase family A2cp1_2368 PF08032 RNA 2'-O ribose methyltransferase substrate binding A2cp1_2370 PF08443 RimK-like ATP-grasp domain A2cp1_2370 PF18030 RimK PreATP-grasp domain A2cp1_2371 PF00012 Hsp70 protein A2cp1_2373 PF04359 Protein of unknown function (DUF493) A2cp1_2374 PF02562 PhoH-like protein A2cp1_2374 PF13638 PIN domain A2cp1_2375 PF00072 Response regulator receiver domain A2cp1_2375 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_2377 PF13533 Biotin-lipoyl like A2cp1_2378 PF07690 Major Facilitator Superfamily A2cp1_2379 PF08359 YsiA-like protein, C-terminal region A2cp1_2379 PF00440 Bacterial regulatory proteins, tetR family A2cp1_2380 PF02424 ApbE family A2cp1_2387 PF02421 Ferrous iron transport protein B A2cp1_2387 PF17910 FeoB cytosolic helical domain A2cp1_2387 PF07664 Ferrous iron transport protein B C terminus A2cp1_2387 PF07670 Nucleoside recognition A2cp1_2388 PF01475 Ferric uptake regulator family A2cp1_2397 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_2397 PF00072 Response regulator receiver domain A2cp1_2398 PF02954 Bacterial regulatory protein, Fis family A2cp1_2398 PF00072 Response regulator receiver domain A2cp1_2398 PF00158 Sigma-54 interaction domain A2cp1_2399 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2399 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2400 PF09587 Bacterial capsule synthesis protein PGA_cap A2cp1_2404 PF08298 PrkA AAA domain A2cp1_2404 PF06798 PrkA serine protein kinase C-terminal domain A2cp1_2404 PF06798 PrkA serine protein kinase C-terminal domain A2cp1_2404 PF08298 PrkA AAA domain A2cp1_2405 PF00012 Hsp70 protein A2cp1_2407 PF07724 AAA domain (Cdc48 subfamily) A2cp1_2407 PF06689 ClpX C4-type zinc finger A2cp1_2407 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_2410 PF01416 tRNA pseudouridine synthase A2cp1_2417 PF00899 ThiF family A2cp1_2419 PF00012 Hsp70 protein A2cp1_2421 PF11953 Domain of unknown function (DUF3470) A2cp1_2421 PF00037 4Fe-4S binding domain A2cp1_2423 PF00121 Triosephosphate isomerase A2cp1_2424 PF00162 Phosphoglycerate kinase A2cp1_2425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A2cp1_2425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain A2cp1_2431 PF00750 tRNA synthetases class I (R) A2cp1_2431 PF05746 DALR anticodon binding domain A2cp1_2431 PF03485 Arginyl tRNA synthetase N terminal domain A2cp1_2433 PF01230 HIT domain A2cp1_2434 PF01343 Peptidase family S49 A2cp1_2435 PF00575 S1 RNA binding domain A2cp1_2436 PF02401 LytB protein A2cp1_2439 PF02224 Cytidylate kinase A2cp1_2441 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit A2cp1_2445 PF13393 Histidyl-tRNA synthetase A2cp1_2445 PF03129 Anticodon binding domain A2cp1_2446 PF02666 Phosphatidylserine decarboxylase A2cp1_2447 PF01175 Urocanase Rossmann-like domain A2cp1_2447 PF17392 Urocanase C-terminal domain A2cp1_2447 PF17391 Urocanase N-terminal domain A2cp1_2448 PF01979 Amidohydrolase family A2cp1_2452 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE A2cp1_2453 PF01256 Carbohydrate kinase A2cp1_2453 PF03853 YjeF-related protein N-terminus A2cp1_2454 PF01648 4'-phosphopantetheinyl transferase superfamily A2cp1_2455 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ A2cp1_2456 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I A2cp1_2456 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II A2cp1_2456 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III A2cp1_2456 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain A2cp1_2458 PF02457 DisA bacterial checkpoint controller nucleotide-binding A2cp1_2459 PF00809 Pterin binding enzyme A2cp1_2460 PF17862 AAA+ lid domain A2cp1_2460 PF06480 FtsH Extracellular A2cp1_2460 PF01434 Peptidase family M41 A2cp1_2460 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_2461 PF09179 TilS substrate binding domain A2cp1_2461 PF01171 PP-loop family A2cp1_2464 PF00909 Ammonium Transporter Family A2cp1_2467 PF00216 Bacterial DNA-binding protein A2cp1_2468 PF05853 beta-keto acid cleavage enzyme A2cp1_2469 PF03061 Thioesterase superfamily A2cp1_2470 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase A2cp1_2470 PF02310 B12 binding domain A2cp1_2472 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit A2cp1_2474 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2475 PF13735 tRNA nucleotidyltransferase domain 2 putative A2cp1_2475 PF01743 Poly A polymerase head domain A2cp1_2475 PF12627 Probable RNA and SrmB- binding site of polymerase A A2cp1_2478 PF00072 Response regulator receiver domain A2cp1_2478 PF00158 Sigma-54 interaction domain A2cp1_2478 PF02954 Bacterial regulatory protein, Fis family A2cp1_2480 PF00873 AcrB/AcrD/AcrF family A2cp1_2481 PF13533 Biotin-lipoyl like A2cp1_2482 PF00440 Bacterial regulatory proteins, tetR family A2cp1_2482 PF16859 Tetracyclin repressor-like, C-terminal domain A2cp1_2483 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2483 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2483 PF07689 KaiB domain A2cp1_2484 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2484 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2485 PF00557 Metallopeptidase family M24 A2cp1_2486 PF03466 LysR substrate binding domain A2cp1_2486 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_2489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_2489 PF02203 Tar ligand binding domain homologue A2cp1_2489 PF00672 HAMP domain A2cp1_2493 PF04264 YceI-like domain A2cp1_2494 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region A2cp1_2494 PF01243 Pyridoxamine 5'-phosphate oxidase A2cp1_2498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2498 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2499 PF00072 Response regulator receiver domain A2cp1_2499 PF00158 Sigma-54 interaction domain A2cp1_2499 PF02954 Bacterial regulatory protein, Fis family A2cp1_2500 PF00582 Universal stress protein family A2cp1_2504 PF00654 Voltage gated chloride channel A2cp1_2505 PF00723 Glycosyl hydrolases family 15 A2cp1_2506 PF00982 Glycosyltransferase family 20 A2cp1_2507 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase A2cp1_2508 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain A2cp1_2508 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain A2cp1_2509 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain A2cp1_2509 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase A2cp1_2510 PF00501 AMP-binding enzyme A2cp1_2515 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_2519 PF01702 Queuine tRNA-ribosyltransferase A2cp1_2520 PF00561 alpha/beta hydrolase fold A2cp1_2522 PF13442 Cytochrome C oxidase, cbb3-type, subunit III A2cp1_2524 PF13247 4Fe-4S dicluster domain A2cp1_2526 PF00654 Voltage gated chloride channel A2cp1_2528 PF01433 Peptidase family M1 domain A2cp1_2528 PF11838 ERAP1-like C-terminal domain A2cp1_2529 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_2530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_2530 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_2530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_2539 PF05717 IS66 Orf2 like protein A2cp1_2542 PF01527 Transposase A2cp1_2543 PF13276 HTH-like domain A2cp1_2543 PF13683 Integrase core domain A2cp1_2545 PF10017 Histidine-specific methyltransferase, SAM-dependent A2cp1_2546 PF03781 Sulfatase-modifying factor enzyme 1 A2cp1_2546 PF12867 DinB superfamily A2cp1_2547 PF05192 MutS domain III A2cp1_2547 PF05188 MutS domain II A2cp1_2547 PF01624 MutS domain I A2cp1_2547 PF05190 MutS family domain IV A2cp1_2547 PF00488 MutS domain V A2cp1_2548 PF00557 Metallopeptidase family M24 A2cp1_2552 PF01590 GAF domain A2cp1_2552 PF00158 Sigma-54 interaction domain A2cp1_2554 PF02954 Bacterial regulatory protein, Fis family A2cp1_2554 PF00158 Sigma-54 interaction domain A2cp1_2554 PF00072 Response regulator receiver domain A2cp1_2557 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A2cp1_2557 PF00460 Flagella basal body rod protein A2cp1_2558 PF02049 Flagellar hook-basal body complex protein FliE A2cp1_2559 PF08345 Flagellar M-ring protein C-terminal A2cp1_2559 PF01514 Secretory protein of YscJ/FliF family A2cp1_2560 PF01706 FliG C-terminal domain A2cp1_2560 PF14841 FliG middle domain A2cp1_2560 PF14842 FliG N-terminal domain A2cp1_2562 PF18269 T3SS EscN ATPase C-terminal domain A2cp1_2562 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_2566 PF07559 Flagellar basal body protein FlaE A2cp1_2566 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A2cp1_2566 PF00460 Flagella basal body rod protein A2cp1_2568 PF01618 MotA/TolQ/ExbB proton channel family A2cp1_2569 PF13677 Membrane MotB of proton-channel complex MotA/MotB A2cp1_2569 PF00691 OmpA family A2cp1_2570 PF00072 Response regulator receiver domain A2cp1_2570 PF01339 CheB methylesterase A2cp1_2571 PF03705 CheR methyltransferase, all-alpha domain A2cp1_2571 PF01739 CheR methyltransferase, SAM binding domain A2cp1_2572 PF01584 CheW-like domain A2cp1_2573 PF00672 HAMP domain A2cp1_2573 PF12729 Four helix bundle sensory module for signal transduction A2cp1_2573 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_2574 PF02895 Signal transducing histidine kinase, homodimeric domain A2cp1_2574 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2574 PF01627 Hpt domain A2cp1_2574 PF01584 CheW-like domain A2cp1_2574 PF09078 CheY binding A2cp1_2575 PF00072 Response regulator receiver domain A2cp1_2578 PF01584 CheW-like domain A2cp1_2579 PF02203 Tar ligand binding domain homologue A2cp1_2579 PF00672 HAMP domain A2cp1_2579 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_2580 PF00072 Response regulator receiver domain A2cp1_2580 PF01339 CheB methylesterase A2cp1_2581 PF03975 CheD chemotactic sensory transduction A2cp1_2582 PF03705 CheR methyltransferase, all-alpha domain A2cp1_2582 PF01739 CheR methyltransferase, SAM binding domain A2cp1_2583 PF09078 CheY binding A2cp1_2583 PF01584 CheW-like domain A2cp1_2583 PF01627 Hpt domain A2cp1_2583 PF01627 Hpt domain A2cp1_2583 PF02895 Signal transducing histidine kinase, homodimeric domain A2cp1_2583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2583 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2583 PF01584 CheW-like domain A2cp1_2583 PF09078 CheY binding A2cp1_2583 PF02895 Signal transducing histidine kinase, homodimeric domain A2cp1_2585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2585 PF00072 Response regulator receiver domain A2cp1_2586 PF08668 HDOD domain A2cp1_2588 PF02154 Flagellar motor switch protein FliM A2cp1_2588 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A2cp1_2589 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term A2cp1_2591 PF00813 FliP family A2cp1_2592 PF01313 Bacterial export proteins, family 3 A2cp1_2593 PF01311 Bacterial export proteins, family 1 A2cp1_2594 PF01312 FlhB HrpN YscU SpaS Family A2cp1_2595 PF00771 FHIPEP family A2cp1_2596 PF00448 SRP54-type protein, GTPase domain A2cp1_2597 PF10609 NUBPL iron-transfer P-loop NTPase A2cp1_2598 PF04539 Sigma-70 region 3 A2cp1_2598 PF04545 Sigma-70, region 4 A2cp1_2598 PF04542 Sigma-70 region 2 A2cp1_2601 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A2cp1_2601 PF00460 Flagella basal body rod protein A2cp1_2602 PF06429 Flagellar basal body rod FlgEFG protein C-terminal A2cp1_2602 PF00460 Flagella basal body rod protein A2cp1_2604 PF02107 Flagellar L-ring protein A2cp1_2605 PF02119 Flagellar P-ring protein A2cp1_2606 PF08525 Opacity-associated protein A N-terminal motif A2cp1_2606 PF01476 LysM domain A2cp1_2606 PF01551 Peptidase family M23 A2cp1_2611 PF00669 Bacterial flagellin N-terminal helical region A2cp1_2611 PF00700 Bacterial flagellin C-terminal helical region A2cp1_2612 PF07195 Flagellar hook-associated protein 2 C-terminus A2cp1_2612 PF02465 Flagellar hook-associated protein 2 N-terminus A2cp1_2612 PF07196 Flagellin hook IN motif A2cp1_2615 PF00669 Bacterial flagellin N-terminal helical region A2cp1_2615 PF00700 Bacterial flagellin C-terminal helical region A2cp1_2617 PF13181 Tetratricopeptide repeat A2cp1_2617 PF00535 Glycosyl transferase family 2 A2cp1_2619 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region A2cp1_2619 PF00326 Prolyl oligopeptidase family A2cp1_2620 PF03205 Molybdopterin guanine dinucleotide synthesis protein B A2cp1_2621 PF03454 MoeA C-terminal region (domain IV) A2cp1_2621 PF03453 MoeA N-terminal region (domain I and II) A2cp1_2621 PF00994 Probable molybdopterin binding domain A2cp1_2623 PF02416 mttA/Hcf106 family A2cp1_2624 PF00582 Universal stress protein family A2cp1_2625 PF00571 CBS domain A2cp1_2625 PF03448 MgtE intracellular N domain A2cp1_2625 PF01769 Divalent cation transporter A2cp1_2626 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2627 PF00072 Response regulator receiver domain A2cp1_2628 PF13426 PAS domain A2cp1_2628 PF13188 PAS domain A2cp1_2628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2628 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2628 PF00989 PAS fold A2cp1_2629 PF02954 Bacterial regulatory protein, Fis family A2cp1_2629 PF00072 Response regulator receiver domain A2cp1_2629 PF00158 Sigma-54 interaction domain A2cp1_2630 PF04055 Radical SAM superfamily A2cp1_2630 PF06463 Molybdenum Cofactor Synthesis C A2cp1_2632 PF00478 IMP dehydrogenase / GMP reductase domain A2cp1_2632 PF00571 CBS domain A2cp1_2634 PF00582 Universal stress protein family A2cp1_2636 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_2636 PF13823 Alcohol dehydrogenase GroES-associated A2cp1_2636 PF00107 Zinc-binding dehydrogenase A2cp1_2638 PF00857 Isochorismatase family A2cp1_2639 PF01966 HD domain A2cp1_2641 PF01026 TatD related DNase A2cp1_2642 PF09334 tRNA synthetases class I (M) A2cp1_2642 PF01588 Putative tRNA binding domain A2cp1_2644 PF09115 DNA polymerase III, delta subunit, C terminal A2cp1_2645 PF05103 DivIVA protein A2cp1_2646 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain A2cp1_2646 PF00476 DNA polymerase family A A2cp1_2646 PF01367 5'-3' exonuclease, C-terminal SAM fold A2cp1_2646 PF01612 3'-5' exonuclease A2cp1_2647 PF16697 Inner membrane component of T3SS, cytoplasmic domain A2cp1_2650 PF02092 Glycyl-tRNA synthetase beta subunit A2cp1_2650 PF05746 DALR anticodon binding domain A2cp1_2651 PF02091 Glycyl-tRNA synthetase alpha subunit A2cp1_2652 PF00294 pfkB family carbohydrate kinase A2cp1_2653 PF11967 Recombination protein O N terminal A2cp1_2653 PF02565 Recombination protein O C terminal A2cp1_2658 PF04055 Radical SAM superfamily A2cp1_2659 PF01464 Transglycosylase SLT domain A2cp1_2662 PF01180 Dihydroorotate dehydrogenase A2cp1_2665 PF01556 DnaJ C terminal domain A2cp1_2665 PF00226 DnaJ domain A2cp1_2667 PF01553 Acyltransferase A2cp1_2668 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain A2cp1_2668 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain A2cp1_2669 PF00459 Inositol monophosphatase family A2cp1_2671 PF06480 FtsH Extracellular A2cp1_2671 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_2671 PF01434 Peptidase family M41 A2cp1_2671 PF17862 AAA+ lid domain A2cp1_2672 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain A2cp1_2672 PF00437 Type II/IV secretion system protein A2cp1_2675 PF00719 Inorganic pyrophosphatase A2cp1_2676 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_2677 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_2678 PF02151 UvrB/uvrC motif A2cp1_2678 PF01541 GIY-YIG catalytic domain A2cp1_2678 PF12826 Helix-hairpin-helix motif A2cp1_2678 PF08459 UvrC Helix-hairpin-helix N-terminal A2cp1_2679 PF12344 Ultra-violet resistance protein B A2cp1_2679 PF04851 Type III restriction enzyme, res subunit A2cp1_2679 PF02151 UvrB/uvrC motif A2cp1_2679 PF17757 UvrB interaction domain A2cp1_2679 PF00271 Helicase conserved C-terminal domain A2cp1_2681 PF00313 'Cold-shock' DNA-binding domain A2cp1_2683 PF09190 DALR domain A2cp1_2683 PF01406 tRNA synthetases class I (C) catalytic domain A2cp1_2684 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase A2cp1_2684 PF02542 YgbB family A2cp1_2685 PF02559 CarD-like/TRCF domain A2cp1_2686 PF13567 Domain of unknown function (DUF4131) A2cp1_2686 PF03772 Competence protein A2cp1_2686 PF00753 Metallo-beta-lactamase superfamily A2cp1_2691 PF00709 Adenylosuccinate synthetase A2cp1_2692 PF13393 Histidyl-tRNA synthetase A2cp1_2694 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A2cp1_2694 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A2cp1_2694 PF01842 ACT domain A2cp1_2695 PF00440 Bacterial regulatory proteins, tetR family A2cp1_2695 PF08359 YsiA-like protein, C-terminal region A2cp1_2696 PF03968 OstA-like protein A2cp1_2696 PF04453 LPS transport system D A2cp1_2698 PF02875 Mur ligase family, glutamate ligase domain A2cp1_2698 PF08245 Mur ligase middle domain A2cp1_2699 PF01039 Carboxyl transferase domain A2cp1_2699 PF17848 Acetyl-coA carboxylase zinc finger domain A2cp1_2700 PF13545 Crp-like helix-turn-helix domain A2cp1_2700 PF00027 Cyclic nucleotide-binding domain A2cp1_2702 PF02769 AIR synthase related protein, C-terminal domain A2cp1_2702 PF00586 AIR synthase related protein, N-terminal domain A2cp1_2703 PF00551 Formyl transferase A2cp1_2705 PF00830 Ribosomal L28 family A2cp1_2706 PF13580 SIS domain A2cp1_2709 PF00962 Adenosine/AMP deaminase A2cp1_2712 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain A2cp1_2712 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain A2cp1_2714 PF08669 Glycine cleavage T-protein C-terminal barrel domain A2cp1_2714 PF01571 Aminomethyltransferase folate-binding domain A2cp1_2715 PF01597 Glycine cleavage H-protein A2cp1_2716 PF02347 Glycine cleavage system P-protein A2cp1_2717 PF02347 Glycine cleavage system P-protein A2cp1_2719 PF02142 MGS-like domain A2cp1_2721 PF00912 Transglycosylase A2cp1_2723 PF01176 Translation initiation factor 1A / IF-1 A2cp1_2724 PF00313 'Cold-shock' DNA-binding domain A2cp1_2727 PF03652 Holliday junction resolvase A2cp1_2728 PF02618 YceG-like family A2cp1_2729 PF08298 PrkA AAA domain A2cp1_2729 PF06798 PrkA serine protein kinase C-terminal domain A2cp1_2730 PF04285 Protein of unknown function (DUF444) A2cp1_2731 PF04293 SpoVR like protein A2cp1_2732 PF01551 Peptidase family M23 A2cp1_2732 PF08460 Bacterial SH3 domain A2cp1_2734 PF00271 Helicase conserved C-terminal domain A2cp1_2734 PF00270 DEAD/DEAH box helicase A2cp1_2735 PF00140 Sigma-70 factor, region 1.2 A2cp1_2735 PF04542 Sigma-70 region 2 A2cp1_2735 PF04545 Sigma-70, region 4 A2cp1_2740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A2cp1_2742 PF13419 Haloacid dehalogenase-like hydrolase A2cp1_2745 PF13369 Transglutaminase-like superfamily A2cp1_2748 PF04072 Leucine carboxyl methyltransferase A2cp1_2756 PF17284 Spermidine synthase tetramerisation domain A2cp1_2759 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2759 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2759 PF00672 HAMP domain A2cp1_2761 PF01813 ATP synthase subunit D A2cp1_2762 PF02874 ATP synthase alpha/beta family, beta-barrel domain A2cp1_2762 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_2763 PF02874 ATP synthase alpha/beta family, beta-barrel domain A2cp1_2763 PF16886 ATPsynthase alpha/beta subunit N-term extension A2cp1_2763 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_2768 PF01496 V-type ATPase 116kDa subunit family A2cp1_2768 PF18670 V-type ATPase subunit I, N-terminal domain A2cp1_2770 PF01339 CheB methylesterase A2cp1_2770 PF03705 CheR methyltransferase, all-alpha domain A2cp1_2770 PF01739 CheR methyltransferase, SAM binding domain A2cp1_2770 PF08448 PAS fold A2cp1_2772 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_2773 PF01627 Hpt domain A2cp1_2773 PF00072 Response regulator receiver domain A2cp1_2773 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2773 PF01584 CheW-like domain A2cp1_2774 PF00072 Response regulator receiver domain A2cp1_2774 PF01339 CheB methylesterase A2cp1_2775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2775 PF07689 KaiB domain A2cp1_2775 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2777 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_2781 PF00440 Bacterial regulatory proteins, tetR family A2cp1_2783 PF00873 AcrB/AcrD/AcrF family A2cp1_2785 PF03167 Uracil DNA glycosylase superfamily A2cp1_2786 PF01048 Phosphorylase superfamily A2cp1_2787 PF00625 Guanylate kinase A2cp1_2788 PF08340 Domain of unknown function (DUF1732) A2cp1_2788 PF03755 YicC-like family, N-terminal region A2cp1_2789 PF03966 Trm112p-like protein A2cp1_2791 PF00294 pfkB family carbohydrate kinase A2cp1_2791 PF01467 Cytidylyltransferase-like A2cp1_2793 PF03279 Bacterial lipid A biosynthesis acyltransferase A2cp1_2794 PF02606 Tetraacyldisaccharide-1-P 4'-kinase A2cp1_2795 PF01075 Glycosyltransferase family 9 (heptosyltransferase) A2cp1_2796 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) A2cp1_2798 PF00005 ABC transporter A2cp1_2798 PF00664 ABC transporter transmembrane region A2cp1_2799 PF00009 Elongation factor Tu GTP binding domain A2cp1_2799 PF00679 Elongation factor G C-terminus A2cp1_2799 PF03764 Elongation factor G, domain IV A2cp1_2799 PF14492 Elongation Factor G, domain II A2cp1_2799 PF03144 Elongation factor Tu domain 2 A2cp1_2800 PF00501 AMP-binding enzyme A2cp1_2800 PF13193 AMP-binding enzyme C-terminal domain A2cp1_2803 PF00266 Aminotransferase class-V A2cp1_2804 PF01914 MarC family integral membrane protein A2cp1_2805 PF00535 Glycosyl transferase family 2 A2cp1_2806 PF02684 Lipid-A-disaccharide synthetase A2cp1_2812 PF12800 4Fe-4S binding domain A2cp1_2812 PF13247 4Fe-4S dicluster domain A2cp1_2813 PF04879 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_2813 PF10518 TAT (twin-arginine translocation) pathway signal sequence A2cp1_2813 PF01568 Molydopterin dinucleotide binding domain A2cp1_2813 PF00384 Molybdopterin oxidoreductase A2cp1_2814 PF04055 Radical SAM superfamily A2cp1_2815 PF00672 HAMP domain A2cp1_2815 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2815 PF13426 PAS domain A2cp1_2816 PF00486 Transcriptional regulatory protein, C terminal A2cp1_2816 PF00072 Response regulator receiver domain A2cp1_2818 PF00890 FAD binding domain A2cp1_2818 PF02910 Fumarate reductase flavoprotein C-term A2cp1_2820 PF00534 Glycosyl transferases group 1 A2cp1_2820 PF13439 Glycosyltransferase Family 4 A2cp1_2825 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A2cp1_2827 PF01933 Uncharacterised protein family UPF0052 A2cp1_2828 PF02397 Bacterial sugar transferase A2cp1_2830 PF13614 AAA domain A2cp1_2835 PF02954 Bacterial regulatory protein, Fis family A2cp1_2835 PF00072 Response regulator receiver domain A2cp1_2835 PF00158 Sigma-54 interaction domain A2cp1_2837 PF00581 Rhodanese-like domain A2cp1_2839 PF01063 Amino-transferase class IV A2cp1_2841 PF00005 ABC transporter A2cp1_2845 PF00106 short chain dehydrogenase A2cp1_2853 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_2858 PF12833 Helix-turn-helix domain A2cp1_2858 PF02805 Metal binding domain of Ada A2cp1_2861 PF00582 Universal stress protein family A2cp1_2862 PF02219 Methylenetetrahydrofolate reductase A2cp1_2863 PF01272 Transcription elongation factor, GreA/GreB, C-term A2cp1_2863 PF03449 Transcription elongation factor, N-terminal A2cp1_2867 PF01926 50S ribosome-binding GTPase A2cp1_2870 PF01121 Dephospho-CoA kinase A2cp1_2875 PF00012 Hsp70 protein A2cp1_2877 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain A2cp1_2877 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain A2cp1_2878 PF00202 Aminotransferase class-III A2cp1_2879 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_2879 PF07724 AAA domain (Cdc48 subfamily) A2cp1_2880 PF00227 Proteasome subunit A2cp1_2881 PF00589 Phage integrase family A2cp1_2881 PF02899 Phage integrase, N-terminal SAM-like domain A2cp1_2883 PF01134 Glucose inhibited division protein A A2cp1_2885 PF01131 DNA topoisomerase A2cp1_2885 PF01751 Toprim domain A2cp1_2885 PF01396 Topoisomerase DNA binding C4 zinc finger A2cp1_2886 PF02481 DNA recombination-mediator protein A A2cp1_2886 PF17782 DprA winged helix domain A2cp1_2887 PF01476 LysM domain A2cp1_2890 PF00563 EAL domain A2cp1_2890 PF01590 GAF domain A2cp1_2890 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_2890 PF00360 Phytochrome region A2cp1_2891 PF00072 Response regulator receiver domain A2cp1_2893 PF00149 Calcineurin-like phosphoesterase A2cp1_2894 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_2894 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_2894 PF07724 AAA domain (Cdc48 subfamily) A2cp1_2894 PF17871 AAA lid domain A2cp1_2896 PF13439 Glycosyltransferase Family 4 A2cp1_2898 PF11999 Protein of unknown function (DUF3494) A2cp1_2898 PF02368 Bacterial Ig-like domain (group 2) A2cp1_2899 PF00437 Type II/IV secretion system protein A2cp1_2901 PF00472 RF-1 domain A2cp1_2901 PF03462 PCRF domain A2cp1_2902 PF00795 Carbon-nitrogen hydrolase A2cp1_2904 PF01966 HD domain A2cp1_2904 PF07698 7TM receptor with intracellular HD hydrolase A2cp1_2904 PF07697 7TM-HD extracellular A2cp1_2905 PF02562 PhoH-like protein A2cp1_2906 PF01978 Sugar-specific transcriptional regulator TrmB A2cp1_2906 PF14332 Domain of unknown function (DUF4388) A2cp1_2908 PF03819 MazG nucleotide pyrophosphohydrolase domain A2cp1_2909 PF01649 Ribosomal protein S20 A2cp1_2911 PF08264 Anticodon-binding domain of tRNA A2cp1_2911 PF00133 tRNA synthetases class I (I, L, M and V) A2cp1_2911 PF09334 tRNA synthetases class I (M) A2cp1_2911 PF13603 Leucyl-tRNA synthetase, Domain 2 A2cp1_2912 PF01336 OB-fold nucleic acid binding domain A2cp1_2912 PF00152 tRNA synthetases class II (D, K and N) A2cp1_2914 PF01339 CheB methylesterase A2cp1_2914 PF00072 Response regulator receiver domain A2cp1_2915 PF03705 CheR methyltransferase, all-alpha domain A2cp1_2915 PF01739 CheR methyltransferase, SAM binding domain A2cp1_2917 PF01584 CheW-like domain A2cp1_2919 PF01471 Putative peptidoglycan binding domain A2cp1_2919 PF13401 AAA domain A2cp1_2920 PF01627 Hpt domain A2cp1_2920 PF01584 CheW-like domain A2cp1_2920 PF02895 Signal transducing histidine kinase, homodimeric domain A2cp1_2920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_2920 PF07194 P2 response regulator binding domain A2cp1_2922 PF01029 NusB family A2cp1_2923 PF00885 6,7-dimethyl-8-ribityllumazine synthase A2cp1_2924 PF00925 GTP cyclohydrolase II A2cp1_2924 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase A2cp1_2925 PF00677 Lumazine binding domain A2cp1_2926 PF01872 RibD C-terminal domain A2cp1_2926 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region A2cp1_2927 PF03477 ATP cone domain A2cp1_2928 PF00464 Serine hydroxymethyltransferase A2cp1_2929 PF02502 Ribose/Galactose Isomerase A2cp1_2930 PF00109 Beta-ketoacyl synthase, N-terminal domain A2cp1_2930 PF02801 Beta-ketoacyl synthase, C-terminal domain A2cp1_2931 PF00550 Phosphopantetheine attachment site A2cp1_2933 PF00698 Acyl transferase domain A2cp1_2934 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal A2cp1_2934 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III A2cp1_2935 PF02504 Fatty acid synthesis protein A2cp1_2936 PF01783 Ribosomal L32p protein family A2cp1_2938 PF00196 Bacterial regulatory proteins, luxR family A2cp1_2938 PF00072 Response regulator receiver domain A2cp1_2943 PF01541 GIY-YIG catalytic domain A2cp1_2949 PF13439 Glycosyltransferase Family 4 A2cp1_2949 PF00534 Glycosyl transferases group 1 A2cp1_2950 PF02397 Bacterial sugar transferase A2cp1_2953 PF03808 Glycosyl transferase WecB/TagA/CpsF family A2cp1_2956 PF00733 Asparagine synthase A2cp1_2956 PF13537 Glutamine amidotransferase domain A2cp1_2957 PF02540 NAD synthase A2cp1_2958 PF00501 AMP-binding enzyme A2cp1_2958 PF13193 AMP-binding enzyme C-terminal domain A2cp1_2971 PF13439 Glycosyltransferase Family 4 A2cp1_2971 PF00534 Glycosyl transferases group 1 A2cp1_2972 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family A2cp1_2976 PF13439 Glycosyltransferase Family 4 A2cp1_2976 PF00534 Glycosyl transferases group 1 A2cp1_2977 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_2977 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster A2cp1_2977 PF13247 4Fe-4S dicluster domain A2cp1_2983 PF03793 PASTA domain A2cp1_2983 PF00069 Protein kinase domain A2cp1_2986 PF00351 Biopterin-dependent aromatic amino acid hydroxylase A2cp1_2987 PF00005 ABC transporter A2cp1_2989 PF00486 Transcriptional regulatory protein, C terminal A2cp1_2989 PF00072 Response regulator receiver domain A2cp1_2991 PF00497 Bacterial extracellular solute-binding proteins, family 3 A2cp1_2991 PF00072 Response regulator receiver domain A2cp1_2991 PF01627 Hpt domain A2cp1_2991 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_2991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3007 PF04972 BON domain A2cp1_3007 PF13629 Pilus formation protein N terminal region A2cp1_3007 PF00263 Bacterial type II and III secretion system protein A2cp1_3009 PF00437 Type II/IV secretion system protein A2cp1_3016 PF01757 Acyltransferase family A2cp1_3025 PF01435 Peptidase family M48 A2cp1_3027 PF00107 Zinc-binding dehydrogenase A2cp1_3027 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_3032 PF08669 Glycine cleavage T-protein C-terminal barrel domain A2cp1_3032 PF01571 Aminomethyltransferase folate-binding domain A2cp1_3034 PF08331 Domain of unknown function (DUF1730) A2cp1_3036 PF01555 DNA methylase A2cp1_3042 PF00375 Sodium:dicarboxylate symporter family A2cp1_3045 PF13183 4Fe-4S dicluster domain A2cp1_3045 PF02754 Cysteine-rich domain A2cp1_3046 PF02913 FAD linked oxidases, C-terminal domain A2cp1_3046 PF01565 FAD binding domain A2cp1_3047 PF02913 FAD linked oxidases, C-terminal domain A2cp1_3047 PF01565 FAD binding domain A2cp1_3055 PF07669 Eco57I restriction-modification methylase A2cp1_3058 PF00665 Integrase core domain A2cp1_3059 PF01695 IstB-like ATP binding protein A2cp1_3063 PF16859 Tetracyclin repressor-like, C-terminal domain A2cp1_3063 PF00440 Bacterial regulatory proteins, tetR family A2cp1_3070 PF01176 Translation initiation factor 1A / IF-1 A2cp1_3076 PF13847 Methyltransferase domain A2cp1_3082 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A2cp1_3084 PF03480 Bacterial extracellular solute-binding protein, family 7 A2cp1_3085 PF00300 Histidine phosphatase superfamily (branch 1) A2cp1_3087 PF01515 Phosphate acetyl/butaryl transferase A2cp1_3087 PF07085 DRTGG domain A2cp1_3088 PF00871 Acetokinase family A2cp1_3089 PF13460 NAD(P)H-binding A2cp1_3092 PF02335 Cytochrome c552 A2cp1_3094 PF00501 AMP-binding enzyme A2cp1_3094 PF13193 AMP-binding enzyme C-terminal domain A2cp1_3095 PF01569 PAP2 superfamily A2cp1_3096 PF00128 Alpha amylase, catalytic domain A2cp1_3103 PF01476 LysM domain A2cp1_3103 PF17969 L,D-transpeptidase C-terminal domain A2cp1_3103 PF03734 L,D-transpeptidase catalytic domain A2cp1_3106 PF00486 Transcriptional regulatory protein, C terminal A2cp1_3106 PF00072 Response regulator receiver domain A2cp1_3107 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3107 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3107 PF00672 HAMP domain A2cp1_3114 PF01425 Amidase A2cp1_3117 PF00535 Glycosyl transferase family 2 A2cp1_3118 PF01522 Polysaccharide deacetylase A2cp1_3118 PF14883 Hypothetical glycosyl hydrolase family 13 A2cp1_3120 PF07963 Prokaryotic N-terminal methylation motif A2cp1_3120 PF14245 Type IV pilin PilA A2cp1_3126 PF00890 FAD binding domain A2cp1_3126 PF02910 Fumarate reductase flavoprotein C-term A2cp1_3130 PF00082 Subtilase family A2cp1_3130 PF02225 PA domain A2cp1_3130 PF06280 Fn3-like domain A2cp1_3132 PF00561 alpha/beta hydrolase fold A2cp1_3133 PF01739 CheR methyltransferase, SAM binding domain A2cp1_3133 PF03705 CheR methyltransferase, all-alpha domain A2cp1_3133 PF08448 PAS fold A2cp1_3133 PF01339 CheB methylesterase A2cp1_3134 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3134 PF01627 Hpt domain A2cp1_3134 PF00672 HAMP domain A2cp1_3134 PF00072 Response regulator receiver domain A2cp1_3134 PF17149 Periplasmic sensor domain found in signal transduction proteins A2cp1_3134 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3135 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3135 PF00989 PAS fold A2cp1_3135 PF01627 Hpt domain A2cp1_3135 PF00072 Response regulator receiver domain A2cp1_3135 PF00497 Bacterial extracellular solute-binding proteins, family 3 A2cp1_3136 PF06745 KaiC A2cp1_3137 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3137 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3137 PF00672 HAMP domain A2cp1_3138 PF00072 Response regulator receiver domain A2cp1_3138 PF00486 Transcriptional regulatory protein, C terminal A2cp1_3149 PF00793 DAHP synthetase I family A2cp1_3150 PF00270 DEAD/DEAH box helicase A2cp1_3150 PF00271 Helicase conserved C-terminal domain A2cp1_3151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3151 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3151 PF00072 Response regulator receiver domain A2cp1_3151 PF09308 LuxQ, periplasmic A2cp1_3154 PF07690 Major Facilitator Superfamily A2cp1_3156 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain A2cp1_3156 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain A2cp1_3156 PF01842 ACT domain A2cp1_3158 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A2cp1_3158 PF00391 PEP-utilising enzyme, mobile domain A2cp1_3158 PF02896 PEP-utilising enzyme, TIM barrel domain A2cp1_3166 PF02687 FtsX-like permease family A2cp1_3166 PF00005 ABC transporter A2cp1_3166 PF12704 MacB-like periplasmic core domain A2cp1_3167 PF00005 ABC transporter A2cp1_3167 PF02687 FtsX-like permease family A2cp1_3167 PF12704 MacB-like periplasmic core domain A2cp1_3168 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_3169 PF07694 5TMR of 5TMR-LYT A2cp1_3169 PF06580 Histidine kinase A2cp1_3170 PF00072 Response regulator receiver domain A2cp1_3170 PF04397 LytTr DNA-binding domain A2cp1_3172 PF02652 L-lactate permease A2cp1_3173 PF02754 Cysteine-rich domain A2cp1_3174 PF11870 Domain of unknown function (DUF3390) A2cp1_3174 PF13183 4Fe-4S dicluster domain A2cp1_3174 PF02589 LUD domain A2cp1_3177 PF13649 Methyltransferase domain A2cp1_3180 PF07238 PilZ domain A2cp1_3183 PF00294 pfkB family carbohydrate kinase A2cp1_3186 PF00588 SpoU rRNA Methylase family A2cp1_3187 PF03458 UPF0126 domain A2cp1_3194 PF00266 Aminotransferase class-V A2cp1_3195 PF00072 Response regulator receiver domain A2cp1_3195 PF00486 Transcriptional regulatory protein, C terminal A2cp1_3197 PF09856 Predicted transcriptional regulator (DUF2083) A2cp1_3197 PF06114 IrrE N-terminal-like domain A2cp1_3197 PF01381 Helix-turn-helix A2cp1_3198 PF01274 Malate synthase A2cp1_3201 PF02446 4-alpha-glucanotransferase A2cp1_3202 PF16657 Maltogenic Amylase, C-terminal domain A2cp1_3202 PF00128 Alpha amylase, catalytic domain A2cp1_3205 PF01262 Alanine dehydrogenase/PNT, C-terminal domain A2cp1_3205 PF05222 Alanine dehydrogenase/PNT, N-terminal domain A2cp1_3206 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch A2cp1_3207 PF02233 NAD(P) transhydrogenase beta subunit A2cp1_3209 PF13193 AMP-binding enzyme C-terminal domain A2cp1_3209 PF00501 AMP-binding enzyme A2cp1_3210 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_3210 PF00107 Zinc-binding dehydrogenase A2cp1_3212 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain A2cp1_3213 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase A2cp1_3213 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg A2cp1_3213 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II A2cp1_3215 PF02436 Conserved carboxylase domain A2cp1_3215 PF00682 HMGL-like A2cp1_3215 PF00364 Biotin-requiring enzyme A2cp1_3215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A2cp1_3215 PF02785 Biotin carboxylase C-terminal domain A2cp1_3215 PF00289 Biotin carboxylase, N-terminal domain A2cp1_3217 PF01814 Hemerythrin HHE cation binding domain A2cp1_3218 PF01565 FAD binding domain A2cp1_3218 PF02913 FAD linked oxidases, C-terminal domain A2cp1_3219 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain A2cp1_3219 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A2cp1_3222 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_3222 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_3222 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_3223 PF00171 Aldehyde dehydrogenase family A2cp1_3225 PF13460 NAD(P)H-binding A2cp1_3225 PF11066 Protein of unknown function (DUF2867) A2cp1_3227 PF08349 Protein of unknown function (DUF1722) A2cp1_3229 PF03631 Virulence factor BrkB A2cp1_3231 PF00012 Hsp70 protein A2cp1_3232 PF00012 Hsp70 protein A2cp1_3235 PF00248 Aldo/keto reductase family A2cp1_3236 PF08502 LeuA allosteric (dimerisation) domain A2cp1_3236 PF00682 HMGL-like A2cp1_3239 PF00248 Aldo/keto reductase family A2cp1_3240 PF01965 DJ-1/PfpI family A2cp1_3243 PF00270 DEAD/DEAH box helicase A2cp1_3243 PF00271 Helicase conserved C-terminal domain A2cp1_3248 PF04073 Aminoacyl-tRNA editing domain A2cp1_3249 PF00535 Glycosyl transferase family 2 A2cp1_3250 PF00535 Glycosyl transferase family 2 A2cp1_3252 PF00535 Glycosyl transferase family 2 A2cp1_3272 PF00342 Phosphoglucose isomerase A2cp1_3274 PF05199 GMC oxidoreductase A2cp1_3277 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_3277 PF00672 HAMP domain A2cp1_3277 PF02203 Tar ligand binding domain homologue A2cp1_3278 PF00764 Arginosuccinate synthase A2cp1_3281 PF13247 4Fe-4S dicluster domain A2cp1_3285 PF02954 Bacterial regulatory protein, Fis family A2cp1_3285 PF00072 Response regulator receiver domain A2cp1_3285 PF00158 Sigma-54 interaction domain A2cp1_3289 PF01638 HxlR-like helix-turn-helix A2cp1_3290 PF05368 NmrA-like family A2cp1_3291 PF00248 Aldo/keto reductase family A2cp1_3293 PF01433 Peptidase family M1 domain A2cp1_3295 PF00561 alpha/beta hydrolase fold A2cp1_3297 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase A2cp1_3298 PF01799 [2Fe-2S] binding domain A2cp1_3298 PF00111 2Fe-2S iron-sulfur cluster binding domain A2cp1_3299 PF13478 XdhC Rossmann domain A2cp1_3299 PF02625 XdhC and CoxI family A2cp1_3300 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_3300 PF00483 Nucleotidyl transferase A2cp1_3302 PF01432 Peptidase family M3 A2cp1_3303 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3303 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3303 PF00989 PAS fold A2cp1_3305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_3306 PF00005 ABC transporter A2cp1_3307 PF00005 ABC transporter A2cp1_3310 PF09364 XFP N-terminal domain A2cp1_3310 PF09363 XFP C-terminal domain A2cp1_3310 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase A2cp1_3311 PF03992 Antibiotic biosynthesis monooxygenase A2cp1_3312 PF06965 Na+/H+ antiporter 1 A2cp1_3312 PF13462 Thioredoxin A2cp1_3314 PF17912 MalK OB fold domain A2cp1_3314 PF00005 ABC transporter A2cp1_3315 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_3316 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_3318 PF04542 Sigma-70 region 2 A2cp1_3318 PF12680 SnoaL-like domain A2cp1_3318 PF08281 Sigma-70, region 4 A2cp1_3319 PF03795 YCII-related domain A2cp1_3323 PF02627 Carboxymuconolactone decarboxylase family A2cp1_3324 PF12680 SnoaL-like domain A2cp1_3324 PF04542 Sigma-70 region 2 A2cp1_3324 PF08281 Sigma-70, region 4 A2cp1_3325 PF03466 LysR substrate binding domain A2cp1_3325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_3327 PF03193 RsgA GTPase A2cp1_3328 PF09456 RcsC Alpha-Beta-Loop (ABL) A2cp1_3328 PF00072 Response regulator receiver domain A2cp1_3328 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3328 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3329 PF00571 CBS domain A2cp1_3329 PF00478 IMP dehydrogenase / GMP reductase domain A2cp1_3330 PF00440 Bacterial regulatory proteins, tetR family A2cp1_3333 PF01053 Cys/Met metabolism PLP-dependent enzyme A2cp1_3337 PF00355 Rieske [2Fe-2S] domain A2cp1_3343 PF03601 Conserved hypothetical protein 698 A2cp1_3345 PF14824 Sirohaem biosynthesis protein central A2cp1_3345 PF10414 Sirohaem synthase dimerisation region A2cp1_3345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases A2cp1_3356 PF03301 Tryptophan 2,3-dioxygenase A2cp1_3357 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_3357 PF00107 Zinc-binding dehydrogenase A2cp1_3360 PF00005 ABC transporter A2cp1_3361 PF00999 Sodium/hydrogen exchanger family A2cp1_3362 PF03466 LysR substrate binding domain A2cp1_3362 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_3364 PF01546 Peptidase family M20/M25/M40 A2cp1_3364 PF07687 Peptidase dimerisation domain A2cp1_3366 PF00313 'Cold-shock' DNA-binding domain A2cp1_3367 PF07732 Multicopper oxidase A2cp1_3367 PF07731 Multicopper oxidase A2cp1_3368 PF00364 Biotin-requiring enzyme A2cp1_3368 PF00561 alpha/beta hydrolase fold A2cp1_3372 PF00571 CBS domain A2cp1_3372 PF00005 ABC transporter A2cp1_3373 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_3375 PF00689 Cation transporting ATPase, C-terminus A2cp1_3375 PF00690 Cation transporter/ATPase, N-terminus A2cp1_3376 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3376 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3376 PF09456 RcsC Alpha-Beta-Loop (ABL) A2cp1_3376 PF00072 Response regulator receiver domain A2cp1_3377 PF03705 CheR methyltransferase, all-alpha domain A2cp1_3377 PF01339 CheB methylesterase A2cp1_3377 PF01739 CheR methyltransferase, SAM binding domain A2cp1_3377 PF08448 PAS fold A2cp1_3379 PF10091 Putative glucoamylase A2cp1_3379 PF06165 Glycosyltransferase family 36 A2cp1_3379 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain A2cp1_3380 PF00487 Fatty acid desaturase A2cp1_3389 PF16884 N-terminal domain of oxidoreductase A2cp1_3389 PF00107 Zinc-binding dehydrogenase A2cp1_3391 PF00723 Glycosyl hydrolases family 15 A2cp1_3392 PF02641 Uncharacterized ACR, COG1993 A2cp1_3397 PF06719 AraC-type transcriptional regulator N-terminus A2cp1_3397 PF12833 Helix-turn-helix domain A2cp1_3398 PF02129 X-Pro dipeptidyl-peptidase (S15 family) A2cp1_3403 PF12680 SnoaL-like domain A2cp1_3403 PF08281 Sigma-70, region 4 A2cp1_3403 PF04542 Sigma-70 region 2 A2cp1_3406 PF05195 Aminopeptidase P, N-terminal domain A2cp1_3406 PF00557 Metallopeptidase family M24 A2cp1_3412 PF17910 FeoB cytosolic helical domain A2cp1_3412 PF02421 Ferrous iron transport protein B A2cp1_3412 PF07670 Nucleoside recognition A2cp1_3412 PF04023 FeoA domain A2cp1_3412 PF07664 Ferrous iron transport protein B C terminus A2cp1_3438 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_3439 PF00478 IMP dehydrogenase / GMP reductase domain A2cp1_3439 PF00571 CBS domain A2cp1_3440 PF07732 Multicopper oxidase A2cp1_3440 PF00394 Multicopper oxidase A2cp1_3440 PF07731 Multicopper oxidase A2cp1_3442 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_3447 PF04011 LemA family A2cp1_3448 PF01435 Peptidase family M48 A2cp1_3450 PF00448 SRP54-type protein, GTPase domain A2cp1_3450 PF02881 SRP54-type protein, helical bundle domain A2cp1_3450 PF02978 Signal peptide binding domain A2cp1_3457 PF02223 Thymidylate kinase A2cp1_3461 PF08757 CotH kinase protein A2cp1_3476 PF01636 Phosphotransferase enzyme family A2cp1_3479 PF02954 Bacterial regulatory protein, Fis family A2cp1_3479 PF00072 Response regulator receiver domain A2cp1_3479 PF00158 Sigma-54 interaction domain A2cp1_3482 PF00691 OmpA family A2cp1_3483 PF00158 Sigma-54 interaction domain A2cp1_3483 PF02954 Bacterial regulatory protein, Fis family A2cp1_3483 PF00072 Response regulator receiver domain A2cp1_3484 PF17092 Penicillin-binding protein OB-like domain A2cp1_3484 PF00912 Transglycosylase A2cp1_3484 PF00905 Penicillin binding protein transpeptidase domain A2cp1_3487 PF00672 HAMP domain A2cp1_3487 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3487 PF00989 PAS fold A2cp1_3487 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3489 PF10459 Peptidase S46 A2cp1_3490 PF00860 Permease family A2cp1_3491 PF02445 Quinolinate synthetase A protein A2cp1_3493 PF04445 Putative SAM-dependent methyltransferase A2cp1_3496 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_3496 PF05362 Lon protease (S16) C-terminal proteolytic domain A2cp1_3496 PF02190 ATP-dependent protease La (LON) substrate-binding domain A2cp1_3497 PF02347 Glycine cleavage system P-protein A2cp1_3498 PF10431 C-terminal, D2-small domain, of ClpB protein A2cp1_3498 PF06689 ClpX C4-type zinc finger A2cp1_3498 PF07724 AAA domain (Cdc48 subfamily) A2cp1_3499 PF00574 Clp protease A2cp1_3500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A2cp1_3500 PF05698 Bacterial trigger factor protein (TF) C-terminus A2cp1_3500 PF05697 Bacterial trigger factor protein (TF) A2cp1_3502 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase A2cp1_3504 PF00535 Glycosyl transferase family 2 A2cp1_3506 PF01725 Ham1 family A2cp1_3507 PF01138 3' exoribonuclease family, domain 1 A2cp1_3507 PF03725 3' exoribonuclease family, domain 2 A2cp1_3508 PF11741 AMIN domain A2cp1_3508 PF01520 N-acetylmuramoyl-L-alanine amidase A2cp1_3512 PF13525 Outer membrane lipoprotein A2cp1_3514 PF00437 Type II/IV secretion system protein A2cp1_3516 PF13091 PLD-like domain A2cp1_3516 PF13396 Phospholipase_D-nuclease N-terminal A2cp1_3517 PF00380 Ribosomal protein S9/S16 A2cp1_3518 PF00572 Ribosomal protein L13 A2cp1_3520 PF00580 UvrD/REP helicase N-terminal domain A2cp1_3520 PF13361 UvrD-like helicase C-terminal domain A2cp1_3525 PF07690 Major Facilitator Superfamily A2cp1_3526 PF00849 RNA pseudouridylate synthase A2cp1_3527 PF02798 Glutathione S-transferase, N-terminal domain A2cp1_3528 PF00675 Insulinase (Peptidase family M16) A2cp1_3528 PF05193 Peptidase M16 inactive domain A2cp1_3530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3530 PF00989 PAS fold A2cp1_3530 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3532 PF00005 ABC transporter A2cp1_3533 PF01551 Peptidase family M23 A2cp1_3533 PF04225 Opacity-associated protein A LysM-like domain A2cp1_3534 PF00459 Inositol monophosphatase family A2cp1_3536 PF00850 Histone deacetylase domain A2cp1_3537 PF00578 AhpC/TSA family A2cp1_3540 PF02875 Mur ligase family, glutamate ligase domain A2cp1_3540 PF08245 Mur ligase middle domain A2cp1_3540 PF01225 Mur ligase family, catalytic domain A2cp1_3542 PF17676 LD-carboxypeptidase C-terminal domain A2cp1_3542 PF02016 LD-carboxypeptidase N-terminal domain A2cp1_3543 PF13193 AMP-binding enzyme C-terminal domain A2cp1_3543 PF00501 AMP-binding enzyme A2cp1_3543 PF16177 Acetyl-coenzyme A synthetase N-terminus A2cp1_3544 PF01594 AI-2E family transporter A2cp1_3545 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase A2cp1_3545 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase A2cp1_3558 PF00472 RF-1 domain A2cp1_3558 PF03462 PCRF domain A2cp1_3559 PF00005 ABC transporter A2cp1_3560 PF12704 MacB-like periplasmic core domain A2cp1_3560 PF02687 FtsX-like permease family A2cp1_3561 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_3563 PF18030 RimK PreATP-grasp domain A2cp1_3563 PF08443 RimK-like ATP-grasp domain A2cp1_3570 PF13417 Glutathione S-transferase, N-terminal domain A2cp1_3571 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily A2cp1_3576 PF00842 Alanine racemase, C-terminal domain A2cp1_3576 PF01168 Alanine racemase, N-terminal domain A2cp1_3577 PF01063 Amino-transferase class IV A2cp1_3578 PF12802 MarR family A2cp1_3582 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain A2cp1_3582 PF01409 tRNA synthetases class II core domain (F) A2cp1_3583 PF01425 Amidase A2cp1_3584 PF02080 TrkA-C domain A2cp1_3584 PF03600 Citrate transporter A2cp1_3588 PF00850 Histone deacetylase domain A2cp1_3590 PF06865 Pyrimidine/purine nucleoside phosphorylase A2cp1_3593 PF02811 PHP domain A2cp1_3593 PF01336 OB-fold nucleic acid binding domain A2cp1_3593 PF17657 Bacterial DNA polymerase III alpha subunit finger domain A2cp1_3593 PF07733 Bacterial DNA polymerase III alpha NTPase domain A2cp1_3593 PF14579 Helix-hairpin-helix motif A2cp1_3594 PF01925 Sulfite exporter TauE/SafE A2cp1_3596 PF00072 Response regulator receiver domain A2cp1_3596 PF00196 Bacterial regulatory proteins, luxR family A2cp1_3597 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_3597 PF13291 ACT domain A2cp1_3600 PF00069 Protein kinase domain A2cp1_3600 PF03793 PASTA domain A2cp1_3602 PF00155 Aminotransferase class I and II A2cp1_3603 PF04055 Radical SAM superfamily A2cp1_3603 PF06968 Biotin and Thiamin Synthesis associated domain A2cp1_3606 PF18073 Rubredoxin metal binding domain A2cp1_3608 PF02782 FGGY family of carbohydrate kinases, C-terminal domain A2cp1_3608 PF00370 FGGY family of carbohydrate kinases, N-terminal domain A2cp1_3613 PF07715 TonB-dependent Receptor Plug Domain A2cp1_3613 PF00593 TonB dependent receptor A2cp1_3615 PF01497 Periplasmic binding protein A2cp1_3616 PF01032 FecCD transport family A2cp1_3617 PF00005 ABC transporter A2cp1_3620 PF01258 Prokaryotic dksA/traR C4-type zinc finger A2cp1_3621 PF00483 Nucleotidyl transferase A2cp1_3623 PF00158 Sigma-54 interaction domain A2cp1_3623 PF00072 Response regulator receiver domain A2cp1_3623 PF02954 Bacterial regulatory protein, Fis family A2cp1_3624 PF00989 PAS fold A2cp1_3624 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3624 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3625 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_3625 PF00072 Response regulator receiver domain A2cp1_3628 PF01923 Cobalamin adenosyltransferase A2cp1_3630 PF01521 Iron-sulphur cluster biosynthesis A2cp1_3631 PF00753 Metallo-beta-lactamase superfamily A2cp1_3634 PF12804 MobA-like NTP transferase domain A2cp1_3635 PF02537 CrcB-like protein, Camphor Resistance (CrcB) A2cp1_3639 PF13649 Methyltransferase domain A2cp1_3640 PF01258 Prokaryotic dksA/traR C4-type zinc finger A2cp1_3641 PF05726 Pirin C-terminal cupin domain A2cp1_3641 PF02678 Pirin A2cp1_3646 PF00581 Rhodanese-like domain A2cp1_3646 PF00899 ThiF family A2cp1_3648 PF02583 Metal-sensitive transcriptional repressor A2cp1_3652 PF02583 Metal-sensitive transcriptional repressor A2cp1_3653 PF00403 Heavy-metal-associated domain A2cp1_3656 PF04542 Sigma-70 region 2 A2cp1_3656 PF08281 Sigma-70, region 4 A2cp1_3657 PF03795 YCII-related domain A2cp1_3661 PF13439 Glycosyltransferase Family 4 A2cp1_3663 PF00248 Aldo/keto reductase family A2cp1_3664 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family A2cp1_3664 PF03466 LysR substrate binding domain A2cp1_3665 PF00085 Thioredoxin A2cp1_3667 PF00781 Diacylglycerol kinase catalytic domain A2cp1_3671 PF00672 HAMP domain A2cp1_3671 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_3671 PF02203 Tar ligand binding domain homologue A2cp1_3672 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain A2cp1_3672 PF02142 MGS-like domain A2cp1_3672 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A2cp1_3673 PF00581 Rhodanese-like domain A2cp1_3674 PF00486 Transcriptional regulatory protein, C terminal A2cp1_3674 PF00072 Response regulator receiver domain A2cp1_3677 PF00535 Glycosyl transferase family 2 A2cp1_3678 PF01145 SPFH domain / Band 7 family A2cp1_3679 PF01145 SPFH domain / Band 7 family A2cp1_3684 PF04205 FMN-binding domain A2cp1_3684 PF00890 FAD binding domain A2cp1_3685 PF05987 Bacterial protein of unknown function (DUF898) A2cp1_3692 PF01695 IstB-like ATP binding protein A2cp1_3693 PF00665 Integrase core domain A2cp1_3701 PF02899 Phage integrase, N-terminal SAM-like domain A2cp1_3701 PF00589 Phage integrase family A2cp1_3703 PF01066 CDP-alcohol phosphatidyltransferase A2cp1_3705 PF01464 Transglycosylase SLT domain A2cp1_3705 PF10145 Phage-related minor tail protein A2cp1_3705 PF01551 Peptidase family M23 A2cp1_3706 PF00890 FAD binding domain A2cp1_3706 PF02910 Fumarate reductase flavoprotein C-term A2cp1_3708 PF00156 Phosphoribosyl transferase domain A2cp1_3712 PF12146 Serine aminopeptidase, S33 A2cp1_3715 PF00795 Carbon-nitrogen hydrolase A2cp1_3718 PF01118 Semialdehyde dehydrogenase, NAD binding domain A2cp1_3718 PF02774 Semialdehyde dehydrogenase, dimerisation domain A2cp1_3719 PF08338 Domain of unknown function (DUF1731) A2cp1_3719 PF01370 NAD dependent epimerase/dehydratase family A2cp1_3721 PF00814 Glycoprotease family A2cp1_3722 PF17820 PDZ domain A2cp1_3722 PF02163 Peptidase family M50 A2cp1_3723 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain A2cp1_3723 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase A2cp1_3723 PF13288 DXP reductoisomerase C-terminal domain A2cp1_3725 PF01255 Putative undecaprenyl diphosphate synthase A2cp1_3726 PF07714 Protein tyrosine kinase A2cp1_3729 PF00696 Amino acid kinase family A2cp1_3729 PF01842 ACT domain A2cp1_3729 PF13840 ACT domain A2cp1_3731 PF01192 RNA polymerase Rpb6 A2cp1_3734 PF00166 Chaperonin 10 Kd subunit A2cp1_3735 PF00118 TCP-1/cpn60 chaperonin family A2cp1_3740 PF00577 Outer membrane usher protein A2cp1_3740 PF13954 PapC N-terminal domain A2cp1_3740 PF13953 PapC C-terminal domain A2cp1_3743 PF05229 Spore Coat Protein U domain A2cp1_3744 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD A2cp1_3745 PF00230 Major intrinsic protein A2cp1_3746 PF01741 Large-conductance mechanosensitive channel, MscL A2cp1_3749 PF00730 HhH-GPD superfamily base excision DNA repair protein A2cp1_3749 PF00633 Helix-hairpin-helix motif A2cp1_3750 PF01066 CDP-alcohol phosphatidyltransferase A2cp1_3751 PF04608 Phosphatidylglycerophosphatase A A2cp1_3752 PF02464 Competence-damaged protein A2cp1_3752 PF00994 Probable molybdopterin binding domain A2cp1_3756 PF00154 recA bacterial DNA recombination protein A2cp1_3766 PF01555 DNA methylase A2cp1_3772 PF03167 Uracil DNA glycosylase superfamily A2cp1_3774 PF00025 ADP-ribosylation factor family A2cp1_3776 PF13662 Toprim domain A2cp1_3776 PF00633 Helix-hairpin-helix motif A2cp1_3776 PF02132 RecR protein A2cp1_3777 PF02575 YbaB/EbfC DNA-binding family A2cp1_3778 PF12169 DNA polymerase III subunits gamma and tau domain III A2cp1_3779 PF14437 MafB19-like deaminase A2cp1_3782 PF13462 Thioredoxin A2cp1_3782 PF06965 Na+/H+ antiporter 1 A2cp1_3784 PF01142 tRNA pseudouridine synthase D (TruD) A2cp1_3786 PF00691 OmpA family A2cp1_3787 PF04226 Transglycosylase associated protein A2cp1_3790 PF07238 PilZ domain A2cp1_3790 PF00069 Protein kinase domain A2cp1_3792 PF00072 Response regulator receiver domain A2cp1_3792 PF00158 Sigma-54 interaction domain A2cp1_3792 PF02954 Bacterial regulatory protein, Fis family A2cp1_3794 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A2cp1_3795 PF00361 Proton-conducting membrane transporter A2cp1_3796 PF00361 Proton-conducting membrane transporter A2cp1_3799 PF00361 Proton-conducting membrane transporter A2cp1_3799 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus A2cp1_3800 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit A2cp1_3801 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit A2cp1_3805 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain A2cp1_3805 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family A2cp1_3805 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain A2cp1_3806 PF00330 Aconitase family (aconitate hydratase) A2cp1_3806 PF00694 Aconitase C-terminal domain A2cp1_3809 PF00999 Sodium/hydrogen exchanger family A2cp1_3811 PF00285 Citrate synthase, C-terminal domain A2cp1_3812 PF01551 Peptidase family M23 A2cp1_3812 PF04225 Opacity-associated protein A LysM-like domain A2cp1_3814 PF00575 S1 RNA binding domain A2cp1_3816 PF00128 Alpha amylase, catalytic domain A2cp1_3816 PF11941 Domain of unknown function (DUF3459) A2cp1_3817 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain A2cp1_3817 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain A2cp1_3821 PF01668 SmpB protein A2cp1_3822 PF02569 Pantoate-beta-alanine ligase A2cp1_3823 PF02548 Ketopantoate hydroxymethyltransferase A2cp1_3824 PF01712 Deoxynucleoside kinase A2cp1_3826 PF00398 Ribosomal RNA adenine dimethylase A2cp1_3828 PF00814 Glycoprotease family A2cp1_3829 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_3829 PF00072 Response regulator receiver domain A2cp1_3830 PF00226 DnaJ domain A2cp1_3830 PF00684 DnaJ central domain A2cp1_3830 PF01556 DnaJ C terminal domain A2cp1_3833 PF00483 Nucleotidyl transferase A2cp1_3835 PF00929 Exonuclease A2cp1_3837 PF00474 Sodium:solute symporter family A2cp1_3839 PF07690 Major Facilitator Superfamily A2cp1_3839 PF00083 Sugar (and other) transporter A2cp1_3840 PF03793 PASTA domain A2cp1_3840 PF00069 Protein kinase domain A2cp1_3843 PF00474 Sodium:solute symporter family A2cp1_3844 PF16591 Helical bimodular sensor domain A2cp1_3844 PF00672 HAMP domain A2cp1_3844 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_3846 PF00571 CBS domain A2cp1_3846 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_3847 PF01053 Cys/Met metabolism PLP-dependent enzyme A2cp1_3850 PF07690 Major Facilitator Superfamily A2cp1_3858 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_3858 PF00672 HAMP domain A2cp1_3858 PF17200 Single Cache domain 2 A2cp1_3859 PF00724 NADH:flavin oxidoreductase / NADH oxidase family A2cp1_3860 PF00115 Cytochrome C and Quinol oxidase polypeptide I A2cp1_3861 PF00753 Metallo-beta-lactamase superfamily A2cp1_3862 PF17785 PUA-like domain A2cp1_3862 PF10672 S-adenosylmethionine-dependent methyltransferase A2cp1_3864 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3864 PF00672 HAMP domain A2cp1_3864 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3867 PF00152 tRNA synthetases class II (D, K and N) A2cp1_3869 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3869 PF00989 PAS fold A2cp1_3869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3870 PF00072 Response regulator receiver domain A2cp1_3870 PF02954 Bacterial regulatory protein, Fis family A2cp1_3870 PF00158 Sigma-54 interaction domain A2cp1_3871 PF01654 Cytochrome bd terminal oxidase subunit I A2cp1_3872 PF02322 Cytochrome bd terminal oxidase subunit II A2cp1_3873 PF00561 alpha/beta hydrolase fold A2cp1_3874 PF08241 Methyltransferase domain A2cp1_3876 PF08281 Sigma-70, region 4 A2cp1_3876 PF04542 Sigma-70 region 2 A2cp1_3881 PF00069 Protein kinase domain A2cp1_3883 PF00378 Enoyl-CoA hydratase/isomerase A2cp1_3884 PF00364 Biotin-requiring enzyme A2cp1_3886 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3886 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3886 PF00072 Response regulator receiver domain A2cp1_3886 PF08448 PAS fold A2cp1_3886 PF13426 PAS domain A2cp1_3888 PF00691 OmpA family A2cp1_3888 PF01389 OmpA-like transmembrane domain A2cp1_3889 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_3891 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_3892 PF00005 ABC transporter A2cp1_3895 PF13247 4Fe-4S dicluster domain A2cp1_3895 PF12800 4Fe-4S binding domain A2cp1_3895 PF09163 Formate dehydrogenase N, transmembrane A2cp1_3896 PF01292 Prokaryotic cytochrome b561 A2cp1_3897 PF04216 Protein involved in formate dehydrogenase formation A2cp1_3901 PF02381 MraZ protein, putative antitoxin-like A2cp1_3903 PF01795 MraW methylase family A2cp1_3905 PF00905 Penicillin binding protein transpeptidase domain A2cp1_3905 PF03717 Penicillin-binding Protein dimerisation domain A2cp1_3906 PF08245 Mur ligase middle domain A2cp1_3906 PF02875 Mur ligase family, glutamate ligase domain A2cp1_3906 PF01225 Mur ligase family, catalytic domain A2cp1_3907 PF08245 Mur ligase middle domain A2cp1_3907 PF02875 Mur ligase family, glutamate ligase domain A2cp1_3907 PF01225 Mur ligase family, catalytic domain A2cp1_3908 PF00953 Glycosyl transferase family 4 A2cp1_3908 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A2cp1_3909 PF02875 Mur ligase family, glutamate ligase domain A2cp1_3909 PF08245 Mur ligase middle domain A2cp1_3910 PF01098 Cell cycle protein A2cp1_3911 PF03033 Glycosyltransferase family 28 N-terminal domain A2cp1_3911 PF04101 Glycosyltransferase family 28 C-terminal domain A2cp1_3912 PF01225 Mur ligase family, catalytic domain A2cp1_3912 PF02875 Mur ligase family, glutamate ligase domain A2cp1_3912 PF08245 Mur ligase middle domain A2cp1_3913 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain A2cp1_3913 PF01565 FAD binding domain A2cp1_3914 PF07478 D-ala D-ala ligase C-terminus A2cp1_3914 PF01820 D-ala D-ala ligase N-terminus A2cp1_3916 PF08478 POTRA domain, FtsQ-type A2cp1_3916 PF03799 Cell division protein FtsQ A2cp1_3917 PF02491 SHS2 domain inserted in FTSA A2cp1_3918 PF00091 Tubulin/FtsZ family, GTPase domain A2cp1_3918 PF12327 FtsZ family, C-terminal domain A2cp1_3921 PF01022 Bacterial regulatory protein, arsR family A2cp1_3925 PF01411 tRNA synthetases class II (A) A2cp1_3925 PF02272 DHHA1 domain A2cp1_3925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A2cp1_3928 PF02390 Putative methyltransferase A2cp1_3930 PF00005 ABC transporter A2cp1_3930 PF12704 MacB-like periplasmic core domain A2cp1_3932 PF01476 LysM domain A2cp1_3932 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase A2cp1_3933 PF01207 Dihydrouridine synthase (Dus) A2cp1_3934 PF00072 Response regulator receiver domain A2cp1_3934 PF00158 Sigma-54 interaction domain A2cp1_3934 PF02954 Bacterial regulatory protein, Fis family A2cp1_3939 PF13180 PDZ domain A2cp1_3939 PF03572 Peptidase family S41 A2cp1_3942 PF06508 Queuosine biosynthesis protein QueC A2cp1_3948 PF01408 Oxidoreductase family, NAD-binding Rossmann fold A2cp1_3948 PF02894 Oxidoreductase family, C-terminal alpha/beta domain A2cp1_3949 PF01475 Ferric uptake regulator family A2cp1_3950 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family A2cp1_3951 PF00436 Single-strand binding protein family A2cp1_3955 PF13419 Haloacid dehalogenase-like hydrolase A2cp1_3956 PF01022 Bacterial regulatory protein, arsR family A2cp1_3958 PF01869 BadF/BadG/BcrA/BcrD ATPase family A2cp1_3960 PF00440 Bacterial regulatory proteins, tetR family A2cp1_3965 PF04002 RadC-like JAB domain A2cp1_3966 PF03577 Peptidase family C69 A2cp1_3967 PF04264 YceI-like domain A2cp1_3969 PF07687 Peptidase dimerisation domain A2cp1_3969 PF01546 Peptidase family M20/M25/M40 A2cp1_3970 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal A2cp1_3970 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_3970 PF14602 Hexapeptide repeat of succinyl-transferase A2cp1_3972 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_3972 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain A2cp1_3976 PF13614 AAA domain A2cp1_3980 PF03471 Transporter associated domain A2cp1_3980 PF00571 CBS domain A2cp1_3981 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase A2cp1_3985 PF00072 Response regulator receiver domain A2cp1_3985 PF00486 Transcriptional regulatory protein, C terminal A2cp1_3986 PF01523 Putative modulator of DNA gyrase A2cp1_3987 PF01523 Putative modulator of DNA gyrase A2cp1_3988 PF00561 alpha/beta hydrolase fold A2cp1_3988 PF00364 Biotin-requiring enzyme A2cp1_3990 PF00106 short chain dehydrogenase A2cp1_3994 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A2cp1_3994 PF02403 Seryl-tRNA synthetase N-terminal domain A2cp1_3996 PF00672 HAMP domain A2cp1_3996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_3996 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_3997 PF00072 Response regulator receiver domain A2cp1_3997 PF00486 Transcriptional regulatory protein, C terminal A2cp1_3998 PF00873 AcrB/AcrD/AcrF family A2cp1_4001 PF01555 DNA methylase A2cp1_4001 PF18273 Type III R-M EcoP15I C-terminal domain A2cp1_4005 PF13276 HTH-like domain A2cp1_4005 PF13683 Integrase core domain A2cp1_4006 PF01527 Transposase A2cp1_4011 PF00271 Helicase conserved C-terminal domain A2cp1_4011 PF04851 Type III restriction enzyme, res subunit A2cp1_4018 PF04542 Sigma-70 region 2 A2cp1_4018 PF08281 Sigma-70, region 4 A2cp1_4018 PF12680 SnoaL-like domain A2cp1_4019 PF00270 DEAD/DEAH box helicase A2cp1_4019 PF08494 DEAD/H associated A2cp1_4019 PF00271 Helicase conserved C-terminal domain A2cp1_4021 PF00580 UvrD/REP helicase N-terminal domain A2cp1_4021 PF13361 UvrD-like helicase C-terminal domain A2cp1_4021 PF12705 PD-(D/E)XK nuclease superfamily A2cp1_4023 PF07516 SecA Wing and Scaffold domain A2cp1_4023 PF01043 SecA preprotein cross-linking domain A2cp1_4023 PF07517 SecA DEAD-like domain A2cp1_4023 PF02810 SEC-C motif A2cp1_4030 PF04055 Radical SAM superfamily A2cp1_4030 PF02310 B12 binding domain A2cp1_4033 PF00425 chorismate binding enzyme A2cp1_4033 PF04715 Anthranilate synthase component I, N terminal region A2cp1_4036 PF00072 Response regulator receiver domain A2cp1_4036 PF00486 Transcriptional regulatory protein, C terminal A2cp1_4037 PF01804 Penicillin amidase A2cp1_4039 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_4039 PF00672 HAMP domain A2cp1_4039 PF16591 Helical bimodular sensor domain A2cp1_4041 PF16197 Ketoacyl-synthetase C-terminal extension A2cp1_4041 PF00550 Phosphopantetheine attachment site A2cp1_4041 PF08659 KR domain A2cp1_4041 PF14765 Polyketide synthase dehydratase A2cp1_4041 PF02801 Beta-ketoacyl synthase, C-terminal domain A2cp1_4041 PF00109 Beta-ketoacyl synthase, N-terminal domain A2cp1_4041 PF00107 Zinc-binding dehydrogenase A2cp1_4041 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_4041 PF00698 Acyl transferase domain A2cp1_4042 PF02801 Beta-ketoacyl synthase, C-terminal domain A2cp1_4042 PF00550 Phosphopantetheine attachment site A2cp1_4042 PF00109 Beta-ketoacyl synthase, N-terminal domain A2cp1_4042 PF08659 KR domain A2cp1_4042 PF08240 Alcohol dehydrogenase GroES-like domain A2cp1_4042 PF14765 Polyketide synthase dehydratase A2cp1_4042 PF00698 Acyl transferase domain A2cp1_4042 PF16197 Ketoacyl-synthetase C-terminal extension A2cp1_4044 PF08279 HTH domain A2cp1_4044 PF13280 WYL domain A2cp1_4048 PF13847 Methyltransferase domain A2cp1_4051 PF00871 Acetokinase family A2cp1_4055 PF00005 ABC transporter A2cp1_4055 PF13732 Domain of unknown function (DUF4162) A2cp1_4056 PF01061 ABC-2 type transporter A2cp1_4057 PF00005 ABC transporter A2cp1_4057 PF12848 ABC transporter A2cp1_4060 PF07044 Protein of unknown function (DUF1329) A2cp1_4063 PF07690 Major Facilitator Superfamily A2cp1_4064 PF02646 RmuC family A2cp1_4068 PF01425 Amidase A2cp1_4070 PF06827 Zinc finger found in FPG and IleRS A2cp1_4070 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain A2cp1_4070 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain A2cp1_4071 PF03949 Malic enzyme, NAD binding domain A2cp1_4071 PF01515 Phosphate acetyl/butaryl transferase A2cp1_4071 PF00390 Malic enzyme, N-terminal domain A2cp1_4075 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_4081 PF00005 ABC transporter A2cp1_4083 PF01713 Smr domain A2cp1_4085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_4086 PF00873 AcrB/AcrD/AcrF family A2cp1_4087 PF00571 CBS domain A2cp1_4087 PF01769 Divalent cation transporter A2cp1_4087 PF03448 MgtE intracellular N domain A2cp1_4088 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family A2cp1_4090 PF03129 Anticodon binding domain A2cp1_4090 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) A2cp1_4090 PF04073 Aminoacyl-tRNA editing domain A2cp1_4092 PF04551 GcpE protein A2cp1_4093 PF13462 Thioredoxin A2cp1_4093 PF06965 Na+/H+ antiporter 1 A2cp1_4094 PF07992 Pyridine nucleotide-disulphide oxidoreductase A2cp1_4095 PF01967 MoaC family A2cp1_4097 PF01739 CheR methyltransferase, SAM binding domain A2cp1_4097 PF08448 PAS fold A2cp1_4097 PF01339 CheB methylesterase A2cp1_4097 PF03705 CheR methyltransferase, all-alpha domain A2cp1_4101 PF12804 MobA-like NTP transferase domain A2cp1_4101 PF14602 Hexapeptide repeat of succinyl-transferase A2cp1_4101 PF00132 Bacterial transferase hexapeptide (six repeats) A2cp1_4102 PF01380 SIS domain A2cp1_4103 PF02834 LigT like Phosphoesterase A2cp1_4106 PF02622 Uncharacterized ACR, COG1678 A2cp1_4108 PF00154 recA bacterial DNA recombination protein A2cp1_4112 PF05161 MOFRL family A2cp1_4112 PF13660 Domain of unknown function (DUF4147) A2cp1_4113 PF00551 Formyl transferase A2cp1_4113 PF02911 Formyl transferase, C-terminal domain A2cp1_4114 PF01029 NusB family A2cp1_4114 PF01189 16S rRNA methyltransferase RsmB/F A2cp1_4115 PF00834 Ribulose-phosphate 3 epimerase family A2cp1_4116 PF03330 Lytic transglycolase A2cp1_4119 PF01794 Ferric reductase like transmembrane component A2cp1_4120 PF00174 Oxidoreductase molybdopterin binding domain A2cp1_4124 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component A2cp1_4126 PF01027 Inhibitor of apoptosis-promoting Bax1 A2cp1_4128 PF03009 Glycerophosphoryl diester phosphodiesterase family A2cp1_4130 PF00005 ABC transporter A2cp1_4130 PF12848 ABC transporter A2cp1_4131 PF07690 Major Facilitator Superfamily A2cp1_4137 PF02926 THUMP domain A2cp1_4137 PF01170 Putative RNA methylase family UPF0020 A2cp1_4138 PF00005 ABC transporter A2cp1_4141 PF09997 Predicted membrane protein (DUF2238) A2cp1_4143 PF01569 PAP2 superfamily A2cp1_4144 PF01895 PhoU domain A2cp1_4145 PF00005 ABC transporter A2cp1_4146 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_4147 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_4148 PF12849 PBP superfamily domain A2cp1_4150 PF16736 Single Cache-like A2cp1_4150 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4150 PF00989 PAS fold A2cp1_4151 PF00486 Transcriptional regulatory protein, C terminal A2cp1_4151 PF00072 Response regulator receiver domain A2cp1_4153 PF00563 EAL domain A2cp1_4153 PF03707 Bacterial signalling protein N terminal repeat A2cp1_4153 PF00990 Diguanylate cyclase, GGDEF domain A2cp1_4154 PF02926 THUMP domain A2cp1_4154 PF01170 Putative RNA methylase family UPF0020 A2cp1_4154 PF10672 S-adenosylmethionine-dependent methyltransferase A2cp1_4159 PF07690 Major Facilitator Superfamily A2cp1_4162 PF00854 POT family A2cp1_4163 PF00854 POT family A2cp1_4164 PF00581 Rhodanese-like domain A2cp1_4165 PF04241 Protein of unknown function (DUF423) A2cp1_4166 PF01329 Pterin 4 alpha carbinolamine dehydratase A2cp1_4168 PF00149 Calcineurin-like phosphoesterase A2cp1_4171 PF02146 Sir2 family A2cp1_4173 PF04379 ApaG domain A2cp1_4176 PF02472 Biopolymer transport protein ExbD/TolR A2cp1_4177 PF01618 MotA/TolQ/ExbB proton channel family A2cp1_4181 PF13452 N-terminal half of MaoC dehydratase A2cp1_4182 PF01113 Dihydrodipicolinate reductase, N-terminus A2cp1_4183 PF00578 AhpC/TSA family A2cp1_4186 PF00905 Penicillin binding protein transpeptidase domain A2cp1_4187 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain A2cp1_4187 PF00391 PEP-utilising enzyme, mobile domain A2cp1_4187 PF02896 PEP-utilising enzyme, TIM barrel domain A2cp1_4189 PF01206 Sulfurtransferase TusA A2cp1_4192 PF13462 Thioredoxin A2cp1_4192 PF06965 Na+/H+ antiporter 1 A2cp1_4194 PF02261 Aspartate decarboxylase A2cp1_4195 PF00425 chorismate binding enzyme A2cp1_4195 PF04715 Anthranilate synthase component I, N terminal region A2cp1_4196 PF00117 Glutamine amidotransferase class-I A2cp1_4197 PF02885 Glycosyl transferase family, helical bundle domain A2cp1_4197 PF00591 Glycosyl transferase family, a/b domain A2cp1_4198 PF00218 Indole-3-glycerol phosphate synthase A2cp1_4199 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase A2cp1_4200 PF00291 Pyridoxal-phosphate dependent enzyme A2cp1_4201 PF00290 Tryptophan synthase alpha chain A2cp1_4203 PF18152 DAHP synthase ferredoxin-like domain A2cp1_4203 PF00793 DAHP synthetase I family A2cp1_4209 PF01047 MarR family A2cp1_4210 PF00892 EamA-like transporter family A2cp1_4211 PF00923 Transaldolase/Fructose-6-phosphate aldolase A2cp1_4212 PF00571 CBS domain A2cp1_4212 PF01380 SIS domain A2cp1_4214 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) A2cp1_4215 PF01557 Fumarylacetoacetate (FAA) hydrolase family A2cp1_4216 PF01113 Dihydrodipicolinate reductase, N-terminus A2cp1_4216 PF05173 Dihydrodipicolinate reductase, C-terminus A2cp1_4217 PF00701 Dihydrodipicolinate synthetase family A2cp1_4218 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain A2cp1_4218 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain A2cp1_4220 PF00206 Lyase A2cp1_4220 PF14698 Argininosuccinate lyase C-terminal A2cp1_4225 PF07670 Nucleoside recognition A2cp1_4226 PF07670 Nucleoside recognition A2cp1_4235 PF00534 Glycosyl transferases group 1 A2cp1_4235 PF13439 Glycosyltransferase Family 4 A2cp1_4244 PF14489 QueF-like protein A2cp1_4245 PF00534 Glycosyl transferases group 1 A2cp1_4245 PF13439 Glycosyltransferase Family 4 A2cp1_4246 PF00069 Protein kinase domain A2cp1_4246 PF00211 Adenylate and Guanylate cyclase catalytic domain A2cp1_4247 PF00883 Cytosol aminopeptidase family, catalytic domain A2cp1_4247 PF02789 Cytosol aminopeptidase family, N-terminal domain A2cp1_4249 PF00719 Inorganic pyrophosphatase A2cp1_4253 PF00155 Aminotransferase class I and II A2cp1_4255 PF00873 AcrB/AcrD/AcrF family A2cp1_4256 PF04945 YHS domain A2cp1_4258 PF01029 NusB family A2cp1_4258 PF01189 16S rRNA methyltransferase RsmB/F A2cp1_4260 PF00893 Small Multidrug Resistance protein A2cp1_4261 PF00893 Small Multidrug Resistance protein A2cp1_4263 PF00920 Dehydratase family A2cp1_4269 PF00072 Response regulator receiver domain A2cp1_4269 PF01627 Hpt domain A2cp1_4269 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4269 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4272 PF02771 Acyl-CoA dehydrogenase, N-terminal domain A2cp1_4272 PF02770 Acyl-CoA dehydrogenase, middle domain A2cp1_4272 PF00441 Acyl-CoA dehydrogenase, C-terminal domain A2cp1_4275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4275 PF00072 Response regulator receiver domain A2cp1_4275 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4275 PF00672 HAMP domain A2cp1_4275 PF01627 Hpt domain A2cp1_4276 PF00989 PAS fold A2cp1_4276 PF01627 Hpt domain A2cp1_4276 PF18415 Histidine kinase receptor ArcB trans-membrane domain A2cp1_4276 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4276 PF00072 Response regulator receiver domain A2cp1_4280 PF00128 Alpha amylase, catalytic domain A2cp1_4280 PF11941 Domain of unknown function (DUF3459) A2cp1_4285 PF02264 LamB porin A2cp1_4287 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_4288 PF00528 Binding-protein-dependent transport system inner membrane component A2cp1_4290 PF00005 ABC transporter A2cp1_4290 PF17912 MalK OB fold domain A2cp1_4291 PF00128 Alpha amylase, catalytic domain A2cp1_4292 PF04454 Encapsulating protein for peroxidase A2cp1_4295 PF00486 Transcriptional regulatory protein, C terminal A2cp1_4295 PF00072 Response regulator receiver domain A2cp1_4300 PF13439 Glycosyltransferase Family 4 A2cp1_4307 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion A2cp1_4308 PF12704 MacB-like periplasmic core domain A2cp1_4308 PF00005 ABC transporter A2cp1_4308 PF02687 FtsX-like permease family A2cp1_4309 PF02687 FtsX-like permease family A2cp1_4309 PF00005 ABC transporter A2cp1_4309 PF12704 MacB-like periplasmic core domain A2cp1_4310 PF00005 ABC transporter A2cp1_4310 PF02687 FtsX-like permease family A2cp1_4310 PF12704 MacB-like periplasmic core domain A2cp1_4311 PF10502 Signal peptidase, peptidase S26 A2cp1_4312 PF04675 DNA ligase N terminus A2cp1_4312 PF01068 ATP dependent DNA ligase domain A2cp1_4312 PF04679 ATP dependent DNA ligase C terminal region A2cp1_4314 PF00374 Nickel-dependent hydrogenase A2cp1_4318 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 A2cp1_4319 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein A2cp1_4319 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus A2cp1_4320 PF00309 Sigma-54 factor, Activator interacting domain (AID) A2cp1_4320 PF04963 Sigma-54 factor, core binding domain A2cp1_4320 PF04552 Sigma-54, DNA binding domain A2cp1_4321 PF00005 ABC transporter A2cp1_4324 PF03279 Bacterial lipid A biosynthesis acyltransferase A2cp1_4326 PF00793 DAHP synthetase I family A2cp1_4327 PF06418 CTP synthase N-terminus A2cp1_4327 PF00117 Glutamine amidotransferase class-I A2cp1_4328 PF02348 Cytidylyltransferase A2cp1_4329 PF02350 UDP-N-acetylglucosamine 2-epimerase A2cp1_4330 PF01479 S4 domain A2cp1_4330 PF00849 RNA pseudouridylate synthase A2cp1_4332 PF12105 SpoU, rRNA methylase, C-terminal A2cp1_4332 PF00588 SpoU rRNA Methylase family A2cp1_4333 PF01018 GTP1/OBG A2cp1_4333 PF01926 50S ribosome-binding GTPase A2cp1_4334 PF01016 Ribosomal L27 protein A2cp1_4335 PF00829 Ribosomal prokaryotic L21 protein A2cp1_4337 PF06803 Protein of unknown function (DUF1232) A2cp1_4338 PF17655 Inward rectifier potassium channel C-terminal domain A2cp1_4338 PF07885 Ion channel A2cp1_4339 PF01008 Initiation factor 2 subunit family A2cp1_4341 PF02934 GatB/GatE catalytic domain A2cp1_4341 PF02637 GatB domain A2cp1_4342 PF01425 Amidase A2cp1_4343 PF02686 Glu-tRNAGln amidotransferase C subunit A2cp1_4345 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) A2cp1_4346 PF09397 Ftsk gamma domain A2cp1_4346 PF17854 FtsK alpha domain A2cp1_4346 PF01580 FtsK/SpoIIIE family A2cp1_4346 PF13491 4TM region of DNA translocase FtsK/SpoIIIE A2cp1_4347 PF13505 Outer membrane protein beta-barrel domain A2cp1_4347 PF00691 OmpA family A2cp1_4349 PF02660 Glycerol-3-phosphate acyltransferase A2cp1_4352 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L A2cp1_4353 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 A2cp1_4354 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A2cp1_4354 PF10531 SLBB domain A2cp1_4354 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit A2cp1_4356 PF00072 Response regulator receiver domain A2cp1_4356 PF01584 CheW-like domain A2cp1_4357 PF13673 Acetyltransferase (GNAT) domain A2cp1_4358 PF00216 Bacterial DNA-binding protein A2cp1_4361 PF00156 Phosphoribosyl transferase domain A2cp1_4361 PF13537 Glutamine amidotransferase domain A2cp1_4362 PF17048 Neutral/alkaline non-lysosomal ceramidase, C-terminal A2cp1_4362 PF04734 Neutral/alkaline non-lysosomal ceramidase, N-terminal A2cp1_4368 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4368 PF00072 Response regulator receiver domain A2cp1_4368 PF09456 RcsC Alpha-Beta-Loop (ABL) A2cp1_4368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4369 PF00586 AIR synthase related protein, N-terminal domain A2cp1_4369 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain A2cp1_4369 PF02769 AIR synthase related protein, C-terminal domain A2cp1_4372 PF03960 ArsC family A2cp1_4373 PF00072 Response regulator receiver domain A2cp1_4373 PF13188 PAS domain A2cp1_4373 PF08448 PAS fold A2cp1_4373 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4373 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4375 PF01713 Smr domain A2cp1_4375 PF00488 MutS domain V A2cp1_4376 PF01411 tRNA synthetases class II (A) A2cp1_4376 PF02272 DHHA1 domain A2cp1_4376 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain A2cp1_4378 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4378 PF08448 PAS fold A2cp1_4378 PF13188 PAS domain A2cp1_4378 PF00072 Response regulator receiver domain A2cp1_4378 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4381 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4381 PF08448 PAS fold A2cp1_4381 PF13188 PAS domain A2cp1_4381 PF00072 Response regulator receiver domain A2cp1_4382 PF13188 PAS domain A2cp1_4382 PF13426 PAS domain A2cp1_4382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4382 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4382 PF00989 PAS fold A2cp1_4384 PF01384 Phosphate transporter family A2cp1_4385 PF04055 Radical SAM superfamily A2cp1_4387 PF02245 Methylpurine-DNA glycosylase (MPG) A2cp1_4390 PF00224 Pyruvate kinase, barrel domain A2cp1_4390 PF02887 Pyruvate kinase, alpha/beta domain A2cp1_4391 PF01321 Creatinase/Prolidase N-terminal domain A2cp1_4391 PF00557 Metallopeptidase family M24 A2cp1_4392 PF16123 Hydroxyacylglutathione hydrolase C-terminus A2cp1_4392 PF00753 Metallo-beta-lactamase superfamily A2cp1_4396 PF00158 Sigma-54 interaction domain A2cp1_4396 PF00072 Response regulator receiver domain A2cp1_4396 PF02954 Bacterial regulatory protein, Fis family A2cp1_4397 PF17862 AAA+ lid domain A2cp1_4397 PF06480 FtsH Extracellular A2cp1_4397 PF01434 Peptidase family M41 A2cp1_4397 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_4398 PF13396 Phospholipase_D-nuclease N-terminal A2cp1_4398 PF13091 PLD-like domain A2cp1_4402 PF00989 PAS fold A2cp1_4402 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4402 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4404 PF00543 Nitrogen regulatory protein P-II A2cp1_4405 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4405 PF00989 PAS fold A2cp1_4405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4406 PF00158 Sigma-54 interaction domain A2cp1_4406 PF00072 Response regulator receiver domain A2cp1_4406 PF02954 Bacterial regulatory protein, Fis family A2cp1_4408 PF00120 Glutamine synthetase, catalytic domain A2cp1_4408 PF03951 Glutamine synthetase, beta-Grasp domain A2cp1_4409 PF00893 Small Multidrug Resistance protein A2cp1_4410 PF07690 Major Facilitator Superfamily A2cp1_4412 PF00005 ABC transporter A2cp1_4413 PF00005 ABC transporter A2cp1_4413 PF12399 Branched-chain amino acid ATP-binding cassette transporter A2cp1_4414 PF02653 Branched-chain amino acid transport system / permease component A2cp1_4414 PF11862 Domain of unknown function (DUF3382) A2cp1_4415 PF02653 Branched-chain amino acid transport system / permease component A2cp1_4416 PF13458 Periplasmic binding protein A2cp1_4417 PF00072 Response regulator receiver domain A2cp1_4417 PF00486 Transcriptional regulatory protein, C terminal A2cp1_4420 PF00933 Glycosyl hydrolase family 3 N terminal domain A2cp1_4423 PF07726 ATPase family associated with various cellular activities (AAA) A2cp1_4423 PF17863 AAA lid domain A2cp1_4426 PF08281 Sigma-70, region 4 A2cp1_4426 PF04542 Sigma-70 region 2 A2cp1_4429 PF13614 AAA domain A2cp1_4429 PF13807 G-rich domain on putative tyrosine kinase A2cp1_4429 PF02706 Chain length determinant protein A2cp1_4430 PF10531 SLBB domain A2cp1_4430 PF02563 Polysaccharide biosynthesis/export protein A2cp1_4430 PF18412 Outer-membrane lipoprotein Wza C-terminal domain A2cp1_4431 PF01451 Low molecular weight phosphotyrosine protein phosphatase A2cp1_4432 PF02719 Polysaccharide biosynthesis protein A2cp1_4434 PF00953 Glycosyl transferase family 4 A2cp1_4434 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 A2cp1_4435 PF01370 NAD dependent epimerase/dehydratase family A2cp1_4436 PF01370 NAD dependent epimerase/dehydratase family A2cp1_4438 PF00534 Glycosyl transferases group 1 A2cp1_4438 PF13439 Glycosyltransferase Family 4 A2cp1_4439 PF13439 Glycosyltransferase Family 4 A2cp1_4439 PF00534 Glycosyl transferases group 1 A2cp1_4441 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) A2cp1_4441 PF13229 Right handed beta helix region A2cp1_4441 PF12708 Pectate lyase superfamily protein A2cp1_4443 PF16363 GDP-mannose 4,6 dehydratase A2cp1_4444 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase A2cp1_4445 PF00483 Nucleotidyl transferase A2cp1_4446 PF04321 RmlD substrate binding domain A2cp1_4447 PF01370 NAD dependent epimerase/dehydratase family A2cp1_4448 PF16363 GDP-mannose 4,6 dehydratase A2cp1_4451 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A2cp1_4451 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A2cp1_4451 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A2cp1_4453 PF00535 Glycosyl transferase family 2 A2cp1_4455 PF00534 Glycosyl transferases group 1 A2cp1_4455 PF13439 Glycosyltransferase Family 4 A2cp1_4456 PF02350 UDP-N-acetylglucosamine 2-epimerase A2cp1_4460 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain A2cp1_4460 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain A2cp1_4460 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain A2cp1_4461 PF02190 ATP-dependent protease La (LON) substrate-binding domain A2cp1_4461 PF05362 Lon protease (S16) C-terminal proteolytic domain A2cp1_4461 PF00004 ATPase family associated with various cellular activities (AAA) A2cp1_4462 PF03030 Inorganic H+ pyrophosphatase A2cp1_4467 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4467 PF00989 PAS fold A2cp1_4467 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4468 PF01969 Protein of unknown function DUF111 A2cp1_4469 PF00731 AIR carboxylase A2cp1_4471 PF02895 Signal transducing histidine kinase, homodimeric domain A2cp1_4471 PF07194 P2 response regulator binding domain A2cp1_4471 PF01627 Hpt domain A2cp1_4471 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4471 PF01584 CheW-like domain A2cp1_4472 PF00072 Response regulator receiver domain A2cp1_4473 PF01584 CheW-like domain A2cp1_4474 PF17202 Single cache domain 3 A2cp1_4474 PF00672 HAMP domain A2cp1_4474 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain A2cp1_4475 PF02769 AIR synthase related protein, C-terminal domain A2cp1_4475 PF00586 AIR synthase related protein, N-terminal domain A2cp1_4476 PF00989 PAS fold A2cp1_4476 PF00512 His Kinase A (phospho-acceptor) domain A2cp1_4476 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase A2cp1_4477 PF00025 ADP-ribosylation factor family A2cp1_4478 PF04851 Type III restriction enzyme, res subunit A2cp1_4478 PF13307 Helicase C-terminal domain A2cp1_4482 PF00226 DnaJ domain A2cp1_4482 PF01556 DnaJ C terminal domain A2cp1_4482 PF00684 DnaJ central domain A2cp1_4483 PF00012 Hsp70 protein A2cp1_4484 PF01025 GrpE A2cp1_4485 PF01628 HrcA protein C terminal domain A2cp1_4485 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding A2cp1_4487 PF00271 Helicase conserved C-terminal domain A2cp1_4487 PF03461 TRCF domain A2cp1_4487 PF02559 CarD-like/TRCF domain A2cp1_4487 PF00270 DEAD/DEAH box helicase A2cp1_4487 PF17757 UvrB interaction domain A2cp1_4490 PF09312 SurA N-terminal domain A2cp1_4490 PF00639 PPIC-type PPIASE domain A2cp1_4491 PF04166 Pyridoxal phosphate biosynthetic protein PdxA A2cp1_4492 PF01926 50S ribosome-binding GTPase A2cp1_4492 PF06071 Protein of unknown function (DUF933) A2cp1_4493 PF00430 ATP synthase B/B' CF(0) A2cp1_4494 PF00137 ATP synthase subunit C A2cp1_4495 PF00119 ATP synthase A chain A2cp1_4499 PF00202 Aminotransferase class-III A2cp1_4501 PF03989 DNA gyrase C-terminal domain, beta-propeller A2cp1_4501 PF00521 DNA gyrase/topoisomerase IV, subunit A A2cp1_4502 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain A2cp1_4502 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain A2cp1_4503 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_4503 PF02874 ATP synthase alpha/beta family, beta-barrel domain A2cp1_4504 PF00231 ATP synthase A2cp1_4505 PF02874 ATP synthase alpha/beta family, beta-barrel domain A2cp1_4505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain A2cp1_4505 PF00306 ATP synthase alpha/beta chain, C terminal domain A2cp1_4506 PF00213 ATP synthase delta (OSCP) subunit A2cp1_4507 PF00011 Hsp20/alpha crystallin family A2cp1_4509 PF17762 HTH domain found in ParB protein A2cp1_4509 PF02195 ParB-like nuclease domain A2cp1_4510 PF13614 AAA domain A2cp1_4511 PF02527 rRNA small subunit methyltransferase G A2cp1_4514 PF14849 YidC periplasmic domain A2cp1_4514 PF02096 60Kd inner membrane protein A2cp1_4515 PF01809 Putative membrane protein insertion efficiency factor A2cp1_4516 PF00825 Ribonuclease P A2cp1_4517 PF00468 Ribosomal protein L34