A2cp1_0001 SM00382 ATPases associated with a variety of cellular activities A2cp1_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain A2cp1_0002 SM00480 DNA polymerase III beta subunit A2cp1_0004 SM00387 Histidine kinase-like ATPases A2cp1_0004 SM00433 TopoisomeraseII A2cp1_0019 SM00857 Resolvase, N terminal domain A2cp1_0036 SM00387 Histidine kinase-like ATPases A2cp1_0036 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0038 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_0039 SM00946 Prolyl-tRNA synthetase, C-terminal A2cp1_0044 SM00060 Fibronectin type 3 domain A2cp1_0045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_0045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0046 SM00822 A2cp1_0046 A2cp1_0059 SM00345 helix_turn_helix gluconate operon transcriptional repressor A2cp1_0064 SM00893 Electron transfer flavoprotein domain A2cp1_0065 SM00893 Electron transfer flavoprotein domain A2cp1_0066 SM00849 Metallo-beta-lactamase superfamily A2cp1_0069 SM00925 MltA specific insert domain A2cp1_0073 SM00363 S4 RNA-binding domain A2cp1_0075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_0075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0084 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_0091 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_0096 SM01321 A2cp1_0096 A2cp1_0098 SM00769 Water Stress and Hypersensitive response A2cp1_0102 SM01018 B12 binding domain A2cp1_0108 SM00387 Histidine kinase-like ATPases A2cp1_0108 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0111 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_0113 SM00849 Metallo-beta-lactamase superfamily A2cp1_0119 SM00448 cheY-homologous receiver domain A2cp1_0124 SM00382 ATPases associated with a variety of cellular activities A2cp1_0124 SM00448 cheY-homologous receiver domain A2cp1_0125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0125 SM00387 Histidine kinase-like ATPases A2cp1_0125 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0129 SM00631 A2cp1_0129 A2cp1_0133 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_0139 SM01400 A2cp1_0139 A2cp1_0150 SM00240 Forkhead associated domain A2cp1_0150 SM00267 diguanylate cyclase A2cp1_0155 SM00028 Tetratricopeptide repeats A2cp1_0162 SM00448 cheY-homologous receiver domain A2cp1_0165 SM00382 ATPases associated with a variety of cellular activities A2cp1_0173 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_0174 SM00996 S-adenosyl-L-homocysteine hydrolase A2cp1_0174 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain A2cp1_0188 SM00460 Transglutaminase/protease-like homologues A2cp1_0191 SM00859 Semialdehyde dehydrogenase, NAD binding domain A2cp1_0195 SM00387 Histidine kinase-like ATPases A2cp1_0195 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0218 SM00363 S4 RNA-binding domain A2cp1_0219 SM00834 Putative regulatory protein A2cp1_0222 SM00881 CoA binding domain A2cp1_0235 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A2cp1_0240 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_0241 SM00890 Domain of unknown function A2cp1_0242 SM01321 A2cp1_0242 A2cp1_0259 SM00028 Tetratricopeptide repeats A2cp1_0263 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_0266 SM00448 cheY-homologous receiver domain A2cp1_0270 SM00567 E-Z type HEAT repeats A2cp1_0273 SM00357 Cold shock protein domain A2cp1_0276 SM00563 Phosphate acyltransferases A2cp1_0278 SM00387 Histidine kinase-like ATPases A2cp1_0278 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0279 SM00878 Biotin carboxylase C-terminal domain A2cp1_0282 SM00028 Tetratricopeptide repeats A2cp1_0282 SM00271 DnaJ molecular chaperone homology domain A2cp1_0283 SM01103 A2cp1_0283 A2cp1_0299 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A2cp1_0299 SM01232 A2cp1_0299 A2cp1_0308 SM00267 diguanylate cyclase A2cp1_0310 SM00421 helix_turn_helix, Lux Regulon A2cp1_0311 SM00861 Transketolase, pyrimidine binding domain A2cp1_0313 SM00382 ATPases associated with a variety of cellular activities A2cp1_0314 SM00855 Phosphoglycerate mutase family A2cp1_0315 SM00642 Alpha-amylase domain A2cp1_0319 SM00387 Histidine kinase-like ATPases A2cp1_0319 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0319 SM00448 cheY-homologous receiver domain A2cp1_0319 SM01079 A2cp1_0319 A2cp1_0323 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0323 SM00387 Histidine kinase-like ATPases A2cp1_0323 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0324 SM00382 ATPases associated with a variety of cellular activities A2cp1_0324 SM00448 cheY-homologous receiver domain A2cp1_0326 SM00060 Fibronectin type 3 domain A2cp1_0331 SM01321 A2cp1_0331 A2cp1_0337 SM01043 Bacterial transcriptional activator domain A2cp1_0338 SM00421 helix_turn_helix, Lux Regulon A2cp1_0339 SM00421 helix_turn_helix, Lux Regulon A2cp1_0349 SM00382 ATPases associated with a variety of cellular activities A2cp1_0349 SM00989 A2cp1_0349 A2cp1_0365 SM00382 ATPases associated with a variety of cellular activities A2cp1_0365 SM00989 A2cp1_0365 A2cp1_0366 SM01092 CO dehydrogenase flavoprotein C-terminal domain A2cp1_0369 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_0369 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0380 SM00849 Metallo-beta-lactamase superfamily A2cp1_0387 SM00091 PAS domain A2cp1_0387 SM00382 ATPases associated with a variety of cellular activities A2cp1_0396 SM00937 A2cp1_0396 A2cp1_0401 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_0411 SM00859 Semialdehyde dehydrogenase, NAD binding domain A2cp1_0413 SM00769 Water Stress and Hypersensitive response A2cp1_0414 SM00382 ATPases associated with a variety of cellular activities A2cp1_0414 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_0415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_0433 SM00382 ATPases associated with a variety of cellular activities A2cp1_0434 SM00470 ParB-like nuclease domain A2cp1_0439 SM00387 Histidine kinase-like ATPases A2cp1_0439 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0440 SM00448 cheY-homologous receiver domain A2cp1_0440 SM00862 Transcriptional regulatory protein, C terminal A2cp1_0445 SM00448 cheY-homologous receiver domain A2cp1_0446 SM00382 ATPases associated with a variety of cellular activities A2cp1_0446 SM00448 cheY-homologous receiver domain A2cp1_0447 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_0447 SM00387 Histidine kinase-like ATPases A2cp1_0447 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0453 SM00563 Phosphate acyltransferases A2cp1_0454 SM00028 Tetratricopeptide repeats A2cp1_0455 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_0457 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_0458 SM00240 Forkhead associated domain A2cp1_0458 SM00267 diguanylate cyclase A2cp1_0465 SM00450 Rhodanese Homology Domain A2cp1_0470 SM00382 ATPases associated with a variety of cellular activities A2cp1_0484 SM00382 ATPases associated with a variety of cellular activities A2cp1_0486 SM00062 Bacterial periplasmic substrate-binding proteins A2cp1_0487 SM01321 A2cp1_0487 A2cp1_0492 SM00878 Biotin carboxylase C-terminal domain A2cp1_0496 SM00831 Cation transporter/ATPase, N-terminus A2cp1_0510 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_0514 SM00028 Tetratricopeptide repeats A2cp1_0519 SM00318 Staphylococcal nuclease homologues A2cp1_0521 SM00382 ATPases associated with a variety of cellular activities A2cp1_0532 SM00387 Histidine kinase-like ATPases A2cp1_0532 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0533 SM00382 ATPases associated with a variety of cellular activities A2cp1_0533 SM00448 cheY-homologous receiver domain A2cp1_0534 SM00756 A2cp1_0534 A2cp1_0535 SM00091 PAS domain A2cp1_0535 SM00387 Histidine kinase-like ATPases A2cp1_0535 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0549 SM00642 Alpha-amylase domain A2cp1_0559 SM00014 Acid phosphatase homologues A2cp1_0565 SM00387 Histidine kinase-like ATPases A2cp1_0565 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0567 SM00382 ATPases associated with a variety of cellular activities A2cp1_0575 SM00342 helix_turn_helix, arabinose operon control protein A2cp1_0594 SM00487 DEAD-like helicases superfamily A2cp1_0594 SM00490 helicase superfamily c-terminal domain A2cp1_0598 SM00267 diguanylate cyclase A2cp1_0598 SM00448 cheY-homologous receiver domain A2cp1_0599 SM00448 cheY-homologous receiver domain A2cp1_0604 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0604 SM00387 Histidine kinase-like ATPases A2cp1_0604 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0609 SM00448 cheY-homologous receiver domain A2cp1_0615 SM00859 Semialdehyde dehydrogenase, NAD binding domain A2cp1_0621 SM00271 DnaJ molecular chaperone homology domain A2cp1_0625 SM00448 cheY-homologous receiver domain A2cp1_0626 SM00138 Methyltransferase, chemotaxis proteins A2cp1_0627 SM00260 Two component signalling adaptor domain A2cp1_0628 SM00073 Histidine Phosphotransfer domain A2cp1_0628 SM00260 Two component signalling adaptor domain A2cp1_0628 SM00387 Histidine kinase-like ATPases A2cp1_0628 SM01231 A2cp1_0628 A2cp1_0631 SM00448 cheY-homologous receiver domain A2cp1_0634 SM00448 cheY-homologous receiver domain A2cp1_0635 SM00260 Two component signalling adaptor domain A2cp1_0637 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_0638 SM00073 Histidine Phosphotransfer domain A2cp1_0638 SM00260 Two component signalling adaptor domain A2cp1_0638 SM00387 Histidine kinase-like ATPases A2cp1_0638 SM00448 cheY-homologous receiver domain A2cp1_0639 SM00448 cheY-homologous receiver domain A2cp1_0640 SM00028 Tetratricopeptide repeats A2cp1_0640 SM00138 Methyltransferase, chemotaxis proteins A2cp1_0641 SM00448 cheY-homologous receiver domain A2cp1_0651 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A2cp1_0655 SM00904 Riboflavin kinase A2cp1_0659 SM00091 PAS domain A2cp1_0659 SM00387 Histidine kinase-like ATPases A2cp1_0659 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0660 SM00382 ATPases associated with a variety of cellular activities A2cp1_0660 SM00448 cheY-homologous receiver domain A2cp1_0666 SM00028 Tetratricopeptide repeats A2cp1_0670 SM00382 ATPases associated with a variety of cellular activities A2cp1_0672 SM00387 Histidine kinase-like ATPases A2cp1_0672 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0673 SM00382 ATPases associated with a variety of cellular activities A2cp1_0673 SM00448 cheY-homologous receiver domain A2cp1_0674 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_0675 SM00842 Cell division protein FtsA A2cp1_0679 SM00965 Secretin and TonB N terminus short domain A2cp1_0682 SM00841 Elongation factor P, C-terminal A2cp1_0682 SM01185 A2cp1_0682 A2cp1_0684 SM00878 Biotin carboxylase C-terminal domain A2cp1_0701 SM00382 ATPases associated with a variety of cellular activities A2cp1_0704 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_0704 SM00245 tail specific protease A2cp1_0708 SM00382 ATPases associated with a variety of cellular activities A2cp1_0708 SM00962 SRP54-type protein, GTPase domain A2cp1_0708 SM00963 SRP54-type protein, helical bundle domain A2cp1_0709 SM00968 SMC proteins Flexible Hinge Domain A2cp1_0710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_0710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0720 SM00382 ATPases associated with a variety of cellular activities A2cp1_0723 SM00382 ATPases associated with a variety of cellular activities A2cp1_0723 SM00448 cheY-homologous receiver domain A2cp1_0726 SM00357 Cold shock protein domain A2cp1_0726 SM00382 ATPases associated with a variety of cellular activities A2cp1_0726 SM00959 Rho termination factor, N-terminal domain A2cp1_0729 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A2cp1_0729 SM00292 breast cancer carboxy-terminal domain A2cp1_0729 SM00532 Ligase N family A2cp1_0731 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_0734 SM00411 bacterial (prokaryotic) histone like domain A2cp1_0746 SM01154 A2cp1_0746 A2cp1_0748 SM00421 helix_turn_helix, Lux Regulon A2cp1_0757 SM00400 zinc finger A2cp1_0757 SM00493 A2cp1_0757 A2cp1_0764 SM00487 DEAD-like helicases superfamily A2cp1_0764 SM00490 helicase superfamily c-terminal domain A2cp1_0767 SM00382 ATPases associated with a variety of cellular activities A2cp1_0770 SM00331 Sigma factor PP2C-like phosphatases A2cp1_0770 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A2cp1_0773 SM00957 SecA DEAD-like domain A2cp1_0773 SM00958 SecA preprotein cross-linking domain A2cp1_0775 SM00478 endonuclease III A2cp1_0778 SM00487 DEAD-like helicases superfamily A2cp1_0783 SM01101 A2cp1_0783 A2cp1_0786 SM00382 ATPases associated with a variety of cellular activities A2cp1_0801 SM00849 Metallo-beta-lactamase superfamily A2cp1_0803 SM00257 Lysin motif A2cp1_0805 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_0806 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_0806 SM00387 Histidine kinase-like ATPases A2cp1_0806 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0820 SM00479 A2cp1_0820 A2cp1_0821 SM00052 Putative diguanylate phosphodiesterase A2cp1_0822 SM00100 Cyclic nucleotide-monophosphate binding domain A2cp1_0822 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_0828 SM00448 cheY-homologous receiver domain A2cp1_0830 SM01091 Transporter associated domain A2cp1_0833 SM00861 Transketolase, pyrimidine binding domain A2cp1_0839 SM00487 DEAD-like helicases superfamily A2cp1_0839 SM00490 helicase superfamily c-terminal domain A2cp1_0839 SM00847 Helicase associated domain (HA2) Add an annotation A2cp1_0841 SM00382 ATPases associated with a variety of cellular activities A2cp1_0841 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_0861 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A2cp1_0863 SM00506 Appr-1"-p processing enzyme A2cp1_0864 SM00382 ATPases associated with a variety of cellular activities A2cp1_0864 SM00448 cheY-homologous receiver domain A2cp1_0873 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_0880 SM00382 ATPases associated with a variety of cellular activities A2cp1_0883 SM00382 ATPases associated with a variety of cellular activities A2cp1_0883 SM00448 cheY-homologous receiver domain A2cp1_0884 SM00387 Histidine kinase-like ATPases A2cp1_0884 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0885 SM00382 ATPases associated with a variety of cellular activities A2cp1_0888 SM00341 Helicase and RNase D C-terminal A2cp1_0888 SM00487 DEAD-like helicases superfamily A2cp1_0888 SM00490 helicase superfamily c-terminal domain A2cp1_0891 SM01322 A2cp1_0891 A2cp1_0894 SM00382 ATPases associated with a variety of cellular activities A2cp1_0899 SM00240 Forkhead associated domain A2cp1_0901 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_0904 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_0905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_0906 SM00421 helix_turn_helix, Lux Regulon A2cp1_0908 SM00507 HNH nucleases A2cp1_0921 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_0922 SM00448 cheY-homologous receiver domain A2cp1_0932 SM00244 prohibitin homologues A2cp1_0939 SM00028 Tetratricopeptide repeats A2cp1_0942 SM00448 cheY-homologous receiver domain A2cp1_0942 SM00862 Transcriptional regulatory protein, C terminal A2cp1_0943 SM00387 Histidine kinase-like ATPases A2cp1_0943 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0951 SM00382 ATPases associated with a variety of cellular activities A2cp1_0955 SM01133 A2cp1_0955 A2cp1_0961 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_0965 SM00060 Fibronectin type 3 domain A2cp1_0968 SM01321 A2cp1_0968 A2cp1_0971 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0971 SM00331 Sigma factor PP2C-like phosphatases A2cp1_0975 SM00887 Ethylbenzene dehydrogenase A2cp1_0976 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_0976 SM00382 ATPases associated with a variety of cellular activities A2cp1_0976 SM00387 Histidine kinase-like ATPases A2cp1_0976 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_0976 SM00448 cheY-homologous receiver domain A2cp1_0989 SM00867 YceI-like domain A2cp1_0999 SM01353 A2cp1_0999 A2cp1_1010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A2cp1_1011 SM00382 ATPases associated with a variety of cellular activities A2cp1_1012 SM01160 A2cp1_1012 A2cp1_1021 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A2cp1_1026 SM00448 cheY-homologous receiver domain A2cp1_1029 SM00342 helix_turn_helix, arabinose operon control protein A2cp1_1029 SM00478 endonuclease III A2cp1_1029 SM01009 AlkA N-terminal domain A2cp1_1034 SM00382 ATPases associated with a variety of cellular activities A2cp1_1040 SM00098 Alkaline phosphatase homologues A2cp1_1041 SM00098 Alkaline phosphatase homologues A2cp1_1044 SM00387 Histidine kinase-like ATPases A2cp1_1044 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1045 SM00448 cheY-homologous receiver domain A2cp1_1047 SM00290 Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger A2cp1_1049 SM00357 Cold shock protein domain A2cp1_1051 SM00155 Phospholipase D. Active site motifs. A2cp1_1056 SM00881 CoA binding domain A2cp1_1059 SM00382 ATPases associated with a variety of cellular activities A2cp1_1066 SM00382 ATPases associated with a variety of cellular activities A2cp1_1069 SM00342 helix_turn_helix, arabinose operon control protein A2cp1_1072 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_1084 SM00226 Low molecular weight phosphatase family A2cp1_1086 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_1096 SM01321 A2cp1_1096 A2cp1_1107 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_1113 SM00470 ParB-like nuclease domain A2cp1_1119 SM00327 von Willebrand factor (vWF) type A domain A2cp1_1120 SM00382 ATPases associated with a variety of cellular activities A2cp1_1123 SM00470 ParB-like nuclease domain A2cp1_1138 SM00400 zinc finger A2cp1_1138 SM00493 A2cp1_1138 A2cp1_1160 SM00487 DEAD-like helicases superfamily A2cp1_1160 SM00490 helicase superfamily c-terminal domain A2cp1_1177 SM00518 AP endonuclease family 2 A2cp1_1183 SM00382 ATPases associated with a variety of cellular activities A2cp1_1183 SM00448 cheY-homologous receiver domain A2cp1_1184 SM00642 Alpha-amylase domain A2cp1_1185 SM00984 UDP binding domain A2cp1_1188 SM00822 A2cp1_1188 A2cp1_1190 SM00829 Enoylreductase A2cp1_1195 SM00382 ATPases associated with a variety of cellular activities A2cp1_1196 SM00849 Metallo-beta-lactamase superfamily A2cp1_1199 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1199 SM00387 Histidine kinase-like ATPases A2cp1_1199 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1202 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_1208 SM00382 ATPases associated with a variety of cellular activities A2cp1_1210 SM00935 Outer membrane protein (OmpH-like) A2cp1_1215 SM01152 A2cp1_1215 A2cp1_1217 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_1223 SM00448 cheY-homologous receiver domain A2cp1_1225 SM00861 Transketolase, pyrimidine binding domain A2cp1_1226 SM00363 S4 RNA-binding domain A2cp1_1228 SM00316 Ribosomal protein S1-like RNA-binding domain A2cp1_1228 SM00322 K homology RNA-binding domain A2cp1_1234 SM01387 A2cp1_1234 A2cp1_1235 SM00316 Ribosomal protein S1-like RNA-binding domain A2cp1_1235 SM00322 K homology RNA-binding domain A2cp1_1237 SM00998 Adenylosuccinate lyase C-terminus A2cp1_1239 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_1239 SM00387 Histidine kinase-like ATPases A2cp1_1239 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1243 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_1246 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1246 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_1247 SM00448 cheY-homologous receiver domain A2cp1_1249 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_1254 SM00947 Carbonic anhydrase A2cp1_1255 SM00507 HNH nucleases A2cp1_1259 SM00091 PAS domain A2cp1_1259 SM00387 Histidine kinase-like ATPases A2cp1_1259 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1265 SM00448 cheY-homologous receiver domain A2cp1_1265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_1266 SM00382 ATPases associated with a variety of cellular activities A2cp1_1271 SM00240 Forkhead associated domain A2cp1_1276 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_1291 SM00974 A2cp1_1291 A2cp1_1315 SM00306 Hint (Hedgehog/Intein) domain N-terminal region A2cp1_1322 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_1322 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1323 SM00829 Enoylreductase A2cp1_1326 SM00563 Phosphate acyltransferases A2cp1_1331 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1350 SM00845 GatB domain A2cp1_1356 SM00448 cheY-homologous receiver domain A2cp1_1359 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_1362 SM00271 DnaJ molecular chaperone homology domain A2cp1_1364 SM00382 ATPases associated with a variety of cellular activities A2cp1_1364 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_1367 SM00481 DNA polymerase alpha chain like domain A2cp1_1383 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1383 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A2cp1_1389 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A2cp1_1389 SM00481 DNA polymerase alpha chain like domain A2cp1_1389 SM00483 DNA polymerase X family A2cp1_1391 SM00852 Probable molybdopterin binding domain A2cp1_1396 SM00240 Forkhead associated domain A2cp1_1400 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_1400 SM00954 Region found in RelA / SpoT proteins A2cp1_1409 SM01323 A2cp1_1409 A2cp1_1413 SM00448 cheY-homologous receiver domain A2cp1_1416 SM00829 Enoylreductase A2cp1_1417 SM00746 metallochaperone-like domain A2cp1_1424 SM00046 Diacylglycerol kinase catalytic domain (presumed) A2cp1_1426 SM00487 DEAD-like helicases superfamily A2cp1_1426 SM00490 helicase superfamily c-terminal domain A2cp1_1441 SM01133 A2cp1_1441 A2cp1_1467 SM00481 DNA polymerase alpha chain like domain A2cp1_1468 SM00507 HNH nucleases A2cp1_1480 SM00984 UDP binding domain A2cp1_1487 SM00798 AICARFT/IMPCHase bienzyme A2cp1_1487 SM00851 MGS-like domain A2cp1_1488 SM01209 A2cp1_1488 A2cp1_1488 SM01210 A2cp1_1488 A2cp1_1489 SM01001 AIR carboxylase A2cp1_1494 SM00382 ATPases associated with a variety of cellular activities A2cp1_1503 SM01004 Delta-aminolevulinic acid dehydratase A2cp1_1513 SM00382 ATPases associated with a variety of cellular activities A2cp1_1514 SM00387 Histidine kinase-like ATPases A2cp1_1515 SM00448 cheY-homologous receiver domain A2cp1_1520 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_1522 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_1523 SM00448 cheY-homologous receiver domain A2cp1_1524 SM00852 Probable molybdopterin binding domain A2cp1_1526 SM00316 Ribosomal protein S1-like RNA-binding domain A2cp1_1526 SM00357 Cold shock protein domain A2cp1_1526 SM00955 A2cp1_1526 A2cp1_1529 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_1530 SM00382 ATPases associated with a variety of cellular activities A2cp1_1531 SM00382 ATPases associated with a variety of cellular activities A2cp1_1536 SM00463 Small MutS-related domain A2cp1_1536 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A2cp1_1536 SM00534 ATPase domain of DNA mismatch repair MUTS family A2cp1_1551 SM00382 ATPases associated with a variety of cellular activities A2cp1_1551 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_1558 SM00710 Parallel beta-helix repeats A2cp1_1558 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A2cp1_1559 SM00382 ATPases associated with a variety of cellular activities A2cp1_1563 SM00507 HNH nucleases A2cp1_1564 SM00028 Tetratricopeptide repeats A2cp1_1566 SM00267 diguanylate cyclase A2cp1_1566 SM00448 cheY-homologous receiver domain A2cp1_1567 SM00260 Two component signalling adaptor domain A2cp1_1568 SM00448 cheY-homologous receiver domain A2cp1_1573 SM00028 Tetratricopeptide repeats A2cp1_1579 SM00448 cheY-homologous receiver domain A2cp1_1583 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A2cp1_1589 SM00986 Uracil DNA glycosylase superfamily A2cp1_1589 SM00987 UreE urease accessory protein, C-terminal domain A2cp1_1591 SM00244 prohibitin homologues A2cp1_1595 SM00882 Coenzyme A transferase A2cp1_1596 SM00882 Coenzyme A transferase A2cp1_1609 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_1612 SM00100 Cyclic nucleotide-monophosphate binding domain A2cp1_1615 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_1615 SM01240 A2cp1_1615 A2cp1_1620 SM00448 cheY-homologous receiver domain A2cp1_1626 SM00382 ATPases associated with a variety of cellular activities A2cp1_1641 SM00849 Metallo-beta-lactamase superfamily A2cp1_1646 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1660 SM00838 Elongation factor G C-terminus A2cp1_1660 SM00889 Elongation factor G, domain IV A2cp1_1662 SM00257 Lysin motif A2cp1_1673 SM00849 Metallo-beta-lactamase superfamily A2cp1_1684 SM00342 helix_turn_helix, arabinose operon control protein A2cp1_1707 SM00387 Histidine kinase-like ATPases A2cp1_1707 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1708 SM00382 ATPases associated with a variety of cellular activities A2cp1_1708 SM00448 cheY-homologous receiver domain A2cp1_1714 SM00345 helix_turn_helix gluconate operon transcriptional repressor A2cp1_1727 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A2cp1_1727 SM00475 5'-3' exonuclease A2cp1_1730 SM00938 Nitrogen regulatory protein P-II A2cp1_1737 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1737 SM00387 Histidine kinase-like ATPases A2cp1_1737 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1737 SM00448 cheY-homologous receiver domain A2cp1_1743 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A2cp1_1747 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A2cp1_1747 SM00091 PAS domain A2cp1_1747 SM00387 Histidine kinase-like ATPases A2cp1_1747 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1747 SM00448 cheY-homologous receiver domain A2cp1_1750 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_1753 SM00090 RIO-like kinase A2cp1_1756 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A2cp1_1756 SM00387 Histidine kinase-like ATPases A2cp1_1756 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1756 SM00448 cheY-homologous receiver domain A2cp1_1758 SM00421 helix_turn_helix, Lux Regulon A2cp1_1762 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_1762 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1763 SM00260 Two component signalling adaptor domain A2cp1_1767 SM00382 ATPases associated with a variety of cellular activities A2cp1_1768 SM00382 ATPases associated with a variety of cellular activities A2cp1_1779 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1781 SM00091 PAS domain A2cp1_1783 SM00563 Phosphate acyltransferases A2cp1_1788 SM01321 A2cp1_1788 A2cp1_1792 SM00382 ATPases associated with a variety of cellular activities A2cp1_1799 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_1801 SM00382 ATPases associated with a variety of cellular activities A2cp1_1801 SM00448 cheY-homologous receiver domain A2cp1_1802 SM00062 Bacterial periplasmic substrate-binding proteins A2cp1_1802 SM00387 Histidine kinase-like ATPases A2cp1_1815 SM00870 A2cp1_1815 A2cp1_1821 SM00382 ATPases associated with a variety of cellular activities A2cp1_1822 SM00382 ATPases associated with a variety of cellular activities A2cp1_1825 SM00382 ATPases associated with a variety of cellular activities A2cp1_1832 SM00612 A2cp1_1832 A2cp1_1833 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_1847 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A2cp1_1847 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A2cp1_1854 SM00062 Bacterial periplasmic substrate-binding proteins A2cp1_1854 SM00387 Histidine kinase-like ATPases A2cp1_1854 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1855 SM00382 ATPases associated with a variety of cellular activities A2cp1_1855 SM00448 cheY-homologous receiver domain A2cp1_1858 SM00014 Acid phosphatase homologues A2cp1_1862 SM00829 Enoylreductase A2cp1_1865 SM00382 ATPases associated with a variety of cellular activities A2cp1_1865 SM00487 DEAD-like helicases superfamily A2cp1_1865 SM00490 helicase superfamily c-terminal domain A2cp1_1866 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A2cp1_1866 SM01232 A2cp1_1866 A2cp1_1867 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_1867 SM00387 Histidine kinase-like ATPases A2cp1_1867 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1867 SM01079 A2cp1_1867 A2cp1_1878 SM00563 Phosphate acyltransferases A2cp1_1885 SM00917 LeuA allosteric (dimerisation) domain A2cp1_1886 SM01329 A2cp1_1886 A2cp1_1895 SM00382 ATPases associated with a variety of cellular activities A2cp1_1898 SM00838 Elongation factor G C-terminus A2cp1_1898 SM00889 Elongation factor G, domain IV A2cp1_1899 SM01144 A2cp1_1899 A2cp1_1900 SM00155 Phospholipase D. Active site motifs. A2cp1_1914 SM00327 von Willebrand factor (vWF) type A domain A2cp1_1920 SM00382 ATPases associated with a variety of cellular activities A2cp1_1926 SM01359 A2cp1_1926 A2cp1_1926 SM01360 A2cp1_1926 A2cp1_1931 SM00028 Tetratricopeptide repeats A2cp1_1952 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1952 SM00387 Histidine kinase-like ATPases A2cp1_1952 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1954 SM00382 ATPases associated with a variety of cellular activities A2cp1_1954 SM00448 cheY-homologous receiver domain A2cp1_1965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1965 SM00387 Histidine kinase-like ATPases A2cp1_1966 SM00421 helix_turn_helix, Lux Regulon A2cp1_1966 SM00448 cheY-homologous receiver domain A2cp1_1970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_1970 SM00387 Histidine kinase-like ATPases A2cp1_1970 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_1974 SM00448 cheY-homologous receiver domain A2cp1_1976 SM00838 Elongation factor G C-terminus A2cp1_1979 SM00849 Metallo-beta-lactamase superfamily A2cp1_1981 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A2cp1_1982 SM00917 LeuA allosteric (dimerisation) domain A2cp1_1992 SM00873 B3/4 domain A2cp1_1992 SM00874 tRNA synthetase B5 domain A2cp1_1992 SM00896 Ferredoxin-fold anticodon binding domain A2cp1_1994 SM00411 bacterial (prokaryotic) histone like domain A2cp1_1999 SM00822 A2cp1_1999 A2cp1_2007 SM00028 Tetratricopeptide repeats A2cp1_2013 SM00478 endonuclease III A2cp1_2016 SM00838 Elongation factor G C-terminus A2cp1_2016 SM00889 Elongation factor G, domain IV A2cp1_2018 SM01403 A2cp1_2018 A2cp1_2021 SM01382 A2cp1_2021 A2cp1_2021 SM01383 A2cp1_2021 A2cp1_2024 SM00322 K homology RNA-binding domain A2cp1_2028 SM01374 A2cp1_2028 A2cp1_2029 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A2cp1_2044 SM00363 S4 RNA-binding domain A2cp1_2044 SM01390 A2cp1_2044 A2cp1_2045 SM00662 RNA polymerases D A2cp1_2056 SM00382 ATPases associated with a variety of cellular activities A2cp1_2056 SM00448 cheY-homologous receiver domain A2cp1_2057 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2057 SM00387 Histidine kinase-like ATPases A2cp1_2057 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2059 SM00507 HNH nucleases A2cp1_2063 SM00363 S4 RNA-binding domain A2cp1_2067 SM00382 ATPases associated with a variety of cellular activities A2cp1_2077 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_2083 SM00382 ATPases associated with a variety of cellular activities A2cp1_2095 SM00387 Histidine kinase-like ATPases A2cp1_2095 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2100 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_2101 SM00448 cheY-homologous receiver domain A2cp1_2101 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_2102 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_2104 SM00861 Transketolase, pyrimidine binding domain A2cp1_2110 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_2114 SM00240 Forkhead associated domain A2cp1_2142 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_2150 SM00091 PAS domain A2cp1_2150 SM00387 Histidine kinase-like ATPases A2cp1_2150 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2156 SM00849 Metallo-beta-lactamase superfamily A2cp1_2156 SM01027 Beta-Casp domain A2cp1_2158 SM00382 ATPases associated with a variety of cellular activities A2cp1_2161 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_2166 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A2cp1_2171 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_2171 SM00387 Histidine kinase-like ATPases A2cp1_2172 SM00421 helix_turn_helix, Lux Regulon A2cp1_2172 SM00448 cheY-homologous receiver domain A2cp1_2175 SM00062 Bacterial periplasmic substrate-binding proteins A2cp1_2175 SM00387 Histidine kinase-like ATPases A2cp1_2176 SM00382 ATPases associated with a variety of cellular activities A2cp1_2176 SM00448 cheY-homologous receiver domain A2cp1_2185 SM00953 A2cp1_2185 A2cp1_2197 SM00382 ATPases associated with a variety of cellular activities A2cp1_2207 SM00100 Cyclic nucleotide-monophosphate binding domain A2cp1_2208 SM00851 MGS-like domain A2cp1_2208 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A2cp1_2210 SM00487 DEAD-like helicases superfamily A2cp1_2210 SM00490 helicase superfamily c-terminal domain A2cp1_2217 SM00852 Probable molybdopterin binding domain A2cp1_2222 SM00563 Phosphate acyltransferases A2cp1_2223 SM00853 MutL C terminal dimerisation domain A2cp1_2223 SM01340 A2cp1_2223 A2cp1_2227 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2227 SM00382 ATPases associated with a variety of cellular activities A2cp1_2229 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_2231 SM00382 ATPases associated with a variety of cellular activities A2cp1_2231 SM00464 Found in ATP-dependent protease La (LON) A2cp1_2247 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A2cp1_2247 SM00534 ATPase domain of DNA mismatch repair MUTS family A2cp1_2251 SM00646 A2cp1_2251 A2cp1_2252 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_2263 SM00363 S4 RNA-binding domain A2cp1_2264 SM00567 E-Z type HEAT repeats A2cp1_2265 SM00965 Secretin and TonB N terminus short domain A2cp1_2275 SM00195 Dual specificity phosphatase, catalytic domain A2cp1_2278 SM00091 PAS domain A2cp1_2278 SM00387 Histidine kinase-like ATPases A2cp1_2278 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2284 SM00422 helix_turn_helix, mercury resistance A2cp1_2290 SM00564 beta-propeller repeat A2cp1_2292 SM00382 ATPases associated with a variety of cellular activities A2cp1_2296 SM00358 Double-stranded RNA binding motif A2cp1_2296 SM00535 Ribonuclease III family A2cp1_2305 SM01192 A2cp1_2305 A2cp1_2305 SM01193 A2cp1_2305 A2cp1_2312 SM00567 E-Z type HEAT repeats A2cp1_2314 SM00564 beta-propeller repeat A2cp1_2317 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_2318 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_2318 SM01091 Transporter associated domain A2cp1_2319 SM00562 A2cp1_2319 A2cp1_2320 SM00881 CoA binding domain A2cp1_2323 SM01329 A2cp1_2323 A2cp1_2325 SM00091 PAS domain A2cp1_2325 SM00387 Histidine kinase-like ATPases A2cp1_2325 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2328 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A2cp1_2336 SM00481 DNA polymerase alpha chain like domain A2cp1_2343 SM00448 cheY-homologous receiver domain A2cp1_2344 SM00387 Histidine kinase-like ATPases A2cp1_2344 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2349 SM00474 3'-5' exonuclease A2cp1_2351 SM00563 Phosphate acyltransferases A2cp1_2353 SM00448 cheY-homologous receiver domain A2cp1_2355 SM00382 ATPases associated with a variety of cellular activities A2cp1_2358 SM00663 RNA polymerase I subunit A N-terminus A2cp1_2363 SM00649 Ribosomal protein L11/L12 A2cp1_2364 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A2cp1_2364 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A2cp1_2368 SM00967 RNA 2'-O ribose methyltransferase substrate binding A2cp1_2372 SM00046 Diacylglycerol kinase catalytic domain (presumed) A2cp1_2374 SM00670 Large family of predicted nucleotide-binding domains A2cp1_2375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2375 SM00267 diguanylate cyclase A2cp1_2385 SM00529 Helix-turn-helix diphteria tox regulatory element A2cp1_2385 SM00899 A2cp1_2385 A2cp1_2391 SM00834 Putative regulatory protein A2cp1_2392 SM00387 Histidine kinase-like ATPases A2cp1_2397 SM00267 diguanylate cyclase A2cp1_2397 SM00448 cheY-homologous receiver domain A2cp1_2398 SM00382 ATPases associated with a variety of cellular activities A2cp1_2398 SM00448 cheY-homologous receiver domain A2cp1_2399 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2400 SM00854 Bacterial capsule synthesis protein PGA_cap A2cp1_2404 SM00763 PrkA AAA domain A2cp1_2407 SM00382 ATPases associated with a variety of cellular activities A2cp1_2407 SM00994 ClpX C4-type zinc finger A2cp1_2407 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_2425 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A2cp1_2431 SM00836 DALR anticodon binding domain A2cp1_2431 SM01016 Arginyl tRNA synthetase N terminal dom A2cp1_2435 SM00316 Ribosomal protein S1-like RNA-binding domain A2cp1_2460 SM00382 ATPases associated with a variety of cellular activities A2cp1_2461 SM00977 TilS substrate C-terminal domain A2cp1_2467 SM00411 bacterial (prokaryotic) histone like domain A2cp1_2474 SM00387 Histidine kinase-like ATPases A2cp1_2474 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2474 SM00448 cheY-homologous receiver domain A2cp1_2478 SM00382 ATPases associated with a variety of cellular activities A2cp1_2483 SM00387 Histidine kinase-like ATPases A2cp1_2483 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2484 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A2cp1_2484 SM00091 PAS domain A2cp1_2484 SM00387 Histidine kinase-like ATPases A2cp1_2484 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2484 SM00448 cheY-homologous receiver domain A2cp1_2489 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_2489 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_2493 SM00867 YceI-like domain A2cp1_2498 SM00387 Histidine kinase-like ATPases A2cp1_2498 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2499 SM00382 ATPases associated with a variety of cellular activities A2cp1_2499 SM00448 cheY-homologous receiver domain A2cp1_2503 SM00421 helix_turn_helix, Lux Regulon A2cp1_2509 SM01350 A2cp1_2509 A2cp1_2518 SM01144 A2cp1_2518 A2cp1_2526 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_2529 SM00829 Enoylreductase A2cp1_2531 SM00507 HNH nucleases A2cp1_2547 SM00534 ATPase domain of DNA mismatch repair MUTS family A2cp1_2552 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2552 SM00382 ATPases associated with a variety of cellular activities A2cp1_2554 SM00382 ATPases associated with a variety of cellular activities A2cp1_2562 SM00382 ATPases associated with a variety of cellular activities A2cp1_2570 SM00448 cheY-homologous receiver domain A2cp1_2571 SM00138 Methyltransferase, chemotaxis proteins A2cp1_2572 SM00260 Two component signalling adaptor domain A2cp1_2573 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_2573 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_2574 SM00073 Histidine Phosphotransfer domain A2cp1_2574 SM00260 Two component signalling adaptor domain A2cp1_2574 SM00387 Histidine kinase-like ATPases A2cp1_2574 SM01231 A2cp1_2574 A2cp1_2575 SM00448 cheY-homologous receiver domain A2cp1_2578 SM00260 Two component signalling adaptor domain A2cp1_2579 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_2579 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_2580 SM00448 cheY-homologous receiver domain A2cp1_2582 SM00138 Methyltransferase, chemotaxis proteins A2cp1_2583 SM00073 Histidine Phosphotransfer domain A2cp1_2583 SM00260 Two component signalling adaptor domain A2cp1_2583 SM00387 Histidine kinase-like ATPases A2cp1_2583 SM01231 A2cp1_2583 A2cp1_2585 SM00448 cheY-homologous receiver domain A2cp1_2596 SM00382 ATPases associated with a variety of cellular activities A2cp1_2596 SM00962 SRP54-type protein, GTPase domain A2cp1_2621 SM00852 Probable molybdopterin binding domain A2cp1_2622 SM00419 helix_turn_helix, cAMP Regulatory protein A2cp1_2625 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_2626 SM00387 Histidine kinase-like ATPases A2cp1_2626 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2627 SM00448 cheY-homologous receiver domain A2cp1_2628 SM00387 Histidine kinase-like ATPases A2cp1_2628 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2628 SM00448 cheY-homologous receiver domain A2cp1_2629 SM00382 ATPases associated with a variety of cellular activities A2cp1_2629 SM00448 cheY-homologous receiver domain A2cp1_2632 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_2639 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_2646 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A2cp1_2646 SM00475 5'-3' exonuclease A2cp1_2646 SM00482 DNA polymerase A domain A2cp1_2647 SM00240 Forkhead associated domain A2cp1_2650 SM00836 DALR anticodon binding domain A2cp1_2655 SM00028 Tetratricopeptide repeats A2cp1_2665 SM00271 DnaJ molecular chaperone homology domain A2cp1_2667 SM00563 Phosphate acyltransferases A2cp1_2671 SM00382 ATPases associated with a variety of cellular activities A2cp1_2672 SM00382 ATPases associated with a variety of cellular activities A2cp1_2673 SM00834 Putative regulatory protein A2cp1_2678 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A2cp1_2678 SM00465 GIY-YIG type nucleases (URI domain) A2cp1_2679 SM00487 DEAD-like helicases superfamily A2cp1_2679 SM00490 helicase superfamily c-terminal domain A2cp1_2681 SM00357 Cold shock protein domain A2cp1_2683 SM00840 A2cp1_2683 A2cp1_2685 SM01058 CarD-like/TRCF domain A2cp1_2686 SM00849 Metallo-beta-lactamase superfamily A2cp1_2688 SM00240 Forkhead associated domain A2cp1_2690 SM00028 Tetratricopeptide repeats A2cp1_2691 SM00788 Adenylosuccinate synthetase A2cp1_2700 SM00100 Cyclic nucleotide-monophosphate binding domain A2cp1_2719 SM00851 MGS-like domain A2cp1_2724 SM00357 Cold shock protein domain A2cp1_2727 SM00732 Likely ribonuclease with RNase H fold. A2cp1_2729 SM00763 PrkA AAA domain A2cp1_2733 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2733 SM00091 PAS domain A2cp1_2734 SM00487 DEAD-like helicases superfamily A2cp1_2734 SM00490 helicase superfamily c-terminal domain A2cp1_2743 SM00822 A2cp1_2743 A2cp1_2749 SM00028 Tetratricopeptide repeats A2cp1_2754 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_2756 SM00028 Tetratricopeptide repeats A2cp1_2758 SM00822 A2cp1_2758 A2cp1_2759 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A2cp1_2759 SM00091 PAS domain A2cp1_2759 SM00387 Histidine kinase-like ATPases A2cp1_2759 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2770 SM00138 Methyltransferase, chemotaxis proteins A2cp1_2771 SM00260 Two component signalling adaptor domain A2cp1_2772 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_2772 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_2773 SM00073 Histidine Phosphotransfer domain A2cp1_2773 SM00260 Two component signalling adaptor domain A2cp1_2773 SM00387 Histidine kinase-like ATPases A2cp1_2773 SM00448 cheY-homologous receiver domain A2cp1_2774 SM00448 cheY-homologous receiver domain A2cp1_2775 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2775 SM00387 Histidine kinase-like ATPases A2cp1_2775 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2785 SM00986 Uracil DNA glycosylase superfamily A2cp1_2785 SM00987 UreE urease accessory protein, C-terminal domain A2cp1_2787 SM00072 Guanylate kinase homologues. A2cp1_2797 SM00481 DNA polymerase alpha chain like domain A2cp1_2798 SM00382 ATPases associated with a variety of cellular activities A2cp1_2799 SM00838 Elongation factor G C-terminus A2cp1_2799 SM00889 Elongation factor G, domain IV A2cp1_2801 SM00710 Parallel beta-helix repeats A2cp1_2808 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_2813 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A2cp1_2815 SM00091 PAS domain A2cp1_2815 SM00387 Histidine kinase-like ATPases A2cp1_2815 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_2816 SM00448 cheY-homologous receiver domain A2cp1_2835 SM00382 ATPases associated with a variety of cellular activities A2cp1_2835 SM00448 cheY-homologous receiver domain A2cp1_2837 SM00450 Rhodanese Homology Domain A2cp1_2841 SM00382 ATPases associated with a variety of cellular activities A2cp1_2858 SM00342 helix_turn_helix, arabinose operon control protein A2cp1_2874 SM00028 Tetratricopeptide repeats A2cp1_2876 SM00028 Tetratricopeptide repeats A2cp1_2876 SM00271 DnaJ molecular chaperone homology domain A2cp1_2879 SM00382 ATPases associated with a variety of cellular activities A2cp1_2879 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_2885 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A2cp1_2885 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A2cp1_2885 SM00493 A2cp1_2885 A2cp1_2890 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2890 SM00267 diguanylate cyclase A2cp1_2890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_2891 SM00448 cheY-homologous receiver domain A2cp1_2894 SM00382 ATPases associated with a variety of cellular activities A2cp1_2898 SM00635 Bacterial Ig-like domain 2 A2cp1_2901 SM00937 A2cp1_2901 A2cp1_2904 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_2907 SM00028 Tetratricopeptide repeats A2cp1_2913 SM00448 cheY-homologous receiver domain A2cp1_2914 SM00448 cheY-homologous receiver domain A2cp1_2915 SM00138 Methyltransferase, chemotaxis proteins A2cp1_2916 SM00567 E-Z type HEAT repeats A2cp1_2917 SM00260 Two component signalling adaptor domain A2cp1_2918 SM00260 Two component signalling adaptor domain A2cp1_2920 SM00073 Histidine Phosphotransfer domain A2cp1_2920 SM00260 Two component signalling adaptor domain A2cp1_2920 SM00387 Histidine kinase-like ATPases A2cp1_2920 SM01231 A2cp1_2920 A2cp1_2930 SM00825 Beta-ketoacyl synthase A2cp1_2932 SM00822 A2cp1_2932 A2cp1_2933 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A2cp1_2938 SM00421 helix_turn_helix, Lux Regulon A2cp1_2938 SM00448 cheY-homologous receiver domain A2cp1_2960 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A2cp1_2973 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A2cp1_2987 SM00382 ATPases associated with a variety of cellular activities A2cp1_2989 SM00448 cheY-homologous receiver domain A2cp1_2991 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_2991 SM00387 Histidine kinase-like ATPases A2cp1_2991 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3000 SM00822 A2cp1_3000 A2cp1_3006 SM00858 A2cp1_3006 A2cp1_3012 SM00028 Tetratricopeptide repeats A2cp1_3024 SM00387 Histidine kinase-like ATPases A2cp1_3027 SM00829 Enoylreductase A2cp1_3038 SM01058 CarD-like/TRCF domain A2cp1_3059 SM00382 ATPases associated with a variety of cellular activities A2cp1_3060 SM00966 SpoVT / AbrB like domain A2cp1_3064 SM00829 Enoylreductase A2cp1_3075 SM00862 Transcriptional regulatory protein, C terminal A2cp1_3085 SM00855 Phosphoglycerate mutase family A2cp1_3095 SM00014 Acid phosphatase homologues A2cp1_3096 SM00642 Alpha-amylase domain A2cp1_3103 SM00257 Lysin motif A2cp1_3106 SM00448 cheY-homologous receiver domain A2cp1_3106 SM00862 Transcriptional regulatory protein, C terminal A2cp1_3107 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3107 SM00387 Histidine kinase-like ATPases A2cp1_3107 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3110 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_3133 SM00138 Methyltransferase, chemotaxis proteins A2cp1_3134 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3134 SM00387 Histidine kinase-like ATPases A2cp1_3134 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3134 SM00448 cheY-homologous receiver domain A2cp1_3135 SM00387 Histidine kinase-like ATPases A2cp1_3135 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3135 SM00448 cheY-homologous receiver domain A2cp1_3136 SM00382 ATPases associated with a variety of cellular activities A2cp1_3137 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3137 SM00387 Histidine kinase-like ATPases A2cp1_3137 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3138 SM00448 cheY-homologous receiver domain A2cp1_3138 SM00862 Transcriptional regulatory protein, C terminal A2cp1_3139 SM00421 helix_turn_helix, Lux Regulon A2cp1_3150 SM00487 DEAD-like helicases superfamily A2cp1_3150 SM00490 helicase superfamily c-terminal domain A2cp1_3151 SM00387 Histidine kinase-like ATPases A2cp1_3151 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3151 SM00448 cheY-homologous receiver domain A2cp1_3160 SM00849 Metallo-beta-lactamase superfamily A2cp1_3164 SM00878 Biotin carboxylase C-terminal domain A2cp1_3167 SM00382 ATPases associated with a variety of cellular activities A2cp1_3170 SM00448 cheY-homologous receiver domain A2cp1_3170 SM00850 LytTr DNA-binding domain A2cp1_3178 SM00028 Tetratricopeptide repeats A2cp1_3195 SM00448 cheY-homologous receiver domain A2cp1_3197 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_3202 SM00642 Alpha-amylase domain A2cp1_3204 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3205 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A2cp1_3205 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A2cp1_3210 SM00829 Enoylreductase A2cp1_3215 SM00878 Biotin carboxylase C-terminal domain A2cp1_3219 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A2cp1_3243 SM00487 DEAD-like helicases superfamily A2cp1_3243 SM00490 helicase superfamily c-terminal domain A2cp1_3247 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_3277 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_3277 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3285 SM00091 PAS domain A2cp1_3285 SM00382 ATPases associated with a variety of cellular activities A2cp1_3288 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_3297 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A2cp1_3303 SM00387 Histidine kinase-like ATPases A2cp1_3303 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3306 SM00382 ATPases associated with a variety of cellular activities A2cp1_3307 SM00382 ATPases associated with a variety of cellular activities A2cp1_3314 SM00382 ATPases associated with a variety of cellular activities A2cp1_3326 SM00822 A2cp1_3326 A2cp1_3328 SM00448 cheY-homologous receiver domain A2cp1_3329 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3329 SM01240 A2cp1_3329 A2cp1_3331 SM00822 A2cp1_3331 A2cp1_3336 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. A2cp1_3338 SM00867 YceI-like domain A2cp1_3357 SM00829 Enoylreductase A2cp1_3360 SM00382 ATPases associated with a variety of cellular activities A2cp1_3366 SM00357 Cold shock protein domain A2cp1_3372 SM00382 ATPases associated with a variety of cellular activities A2cp1_3375 SM00831 Cation transporter/ATPase, N-terminus A2cp1_3376 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_3376 SM00387 Histidine kinase-like ATPases A2cp1_3376 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3377 SM00138 Methyltransferase, chemotaxis proteins A2cp1_3377 SM00387 Histidine kinase-like ATPases A2cp1_3377 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3377 SM00448 cheY-homologous receiver domain A2cp1_3379 SM01068 Putative carbohydrate binding domain A2cp1_3389 SM00829 Enoylreductase A2cp1_3392 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3397 SM00342 helix_turn_helix, arabinose operon control protein A2cp1_3401 SM00028 Tetratricopeptide repeats A2cp1_3406 SM01011 Aminopeptidase P, N-terminal domain A2cp1_3408 SM01043 Bacterial transcriptional activator domain A2cp1_3410 SM00899 A2cp1_3410 A2cp1_3411 SM00899 A2cp1_3411 A2cp1_3421 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_3439 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3442 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3443 SM00671 Sel1-like repeats. A2cp1_3450 SM00382 ATPases associated with a variety of cellular activities A2cp1_3450 SM00962 SRP54-type protein, GTPase domain A2cp1_3450 SM00963 SRP54-type protein, helical bundle domain A2cp1_3455 SM00028 Tetratricopeptide repeats A2cp1_3463 SM00240 Forkhead associated domain A2cp1_3465 SM00028 Tetratricopeptide repeats A2cp1_3466 SM00028 Tetratricopeptide repeats A2cp1_3478 SM00028 Tetratricopeptide repeats A2cp1_3479 SM00240 Forkhead associated domain A2cp1_3479 SM00382 ATPases associated with a variety of cellular activities A2cp1_3483 SM00382 ATPases associated with a variety of cellular activities A2cp1_3483 SM00448 cheY-homologous receiver domain A2cp1_3487 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3487 SM00387 Histidine kinase-like ATPases A2cp1_3487 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3494 SM00507 HNH nucleases A2cp1_3496 SM00382 ATPases associated with a variety of cellular activities A2cp1_3496 SM00464 Found in ATP-dependent protease La (LON) A2cp1_3498 SM00382 ATPases associated with a variety of cellular activities A2cp1_3498 SM00994 ClpX C4-type zinc finger A2cp1_3498 SM01086 C-terminal, D2-small domain, of ClpB protein A2cp1_3503 SM01259 A2cp1_3503 A2cp1_3508 SM00646 A2cp1_3508 A2cp1_3510 SM00028 Tetratricopeptide repeats A2cp1_3512 SM00028 Tetratricopeptide repeats A2cp1_3516 SM00155 Phospholipase D. Active site motifs. A2cp1_3530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3530 SM00387 Histidine kinase-like ATPases A2cp1_3530 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3532 SM00382 ATPases associated with a variety of cellular activities A2cp1_3548 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_3552 SM00487 DEAD-like helicases superfamily A2cp1_3552 SM00490 helicase superfamily c-terminal domain A2cp1_3559 SM00382 ATPases associated with a variety of cellular activities A2cp1_3562 SM00460 Transglutaminase/protease-like homologues A2cp1_3564 SM00028 Tetratricopeptide repeats A2cp1_3564 SM00386 HAT (Half-A-TPR) repeats A2cp1_3576 SM01005 Alanine racemase, C-terminal domain A2cp1_3578 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_3582 SM00896 Ferredoxin-fold anticodon binding domain A2cp1_3593 SM00481 DNA polymerase alpha chain like domain A2cp1_3596 SM00421 helix_turn_helix, Lux Regulon A2cp1_3600 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_3600 SM00320 WD40 repeats A2cp1_3603 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_3603 SM00876 Biotin and Thiamin Synthesis associated domain A2cp1_3606 SM00382 ATPases associated with a variety of cellular activities A2cp1_3612 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A2cp1_3617 SM00382 ATPases associated with a variety of cellular activities A2cp1_3618 SM00507 HNH nucleases A2cp1_3623 SM00382 ATPases associated with a variety of cellular activities A2cp1_3623 SM00448 cheY-homologous receiver domain A2cp1_3624 SM00387 Histidine kinase-like ATPases A2cp1_3624 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3624 SM00448 cheY-homologous receiver domain A2cp1_3625 SM00267 diguanylate cyclase A2cp1_3625 SM00448 cheY-homologous receiver domain A2cp1_3631 SM00849 Metallo-beta-lactamase superfamily A2cp1_3646 SM00450 Rhodanese Homology Domain A2cp1_3667 SM00046 Diacylglycerol kinase catalytic domain (presumed) A2cp1_3671 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_3671 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3672 SM00851 MGS-like domain A2cp1_3672 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A2cp1_3673 SM00450 Rhodanese Homology Domain A2cp1_3674 SM00448 cheY-homologous receiver domain A2cp1_3676 SM00567 E-Z type HEAT repeats A2cp1_3678 SM00244 prohibitin homologues A2cp1_3679 SM00244 prohibitin homologues A2cp1_3687 SM00530 Helix-turn-helix XRE-family like proteins A2cp1_3692 SM00382 ATPases associated with a variety of cellular activities A2cp1_3704 SM00028 Tetratricopeptide repeats A2cp1_3709 SM00470 ParB-like nuclease domain A2cp1_3717 SM00060 Fibronectin type 3 domain A2cp1_3718 SM00859 Semialdehyde dehydrogenase, NAD binding domain A2cp1_3722 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_3726 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_3731 SM01409 A2cp1_3731 A2cp1_3734 SM00883 Chaperonin 10 Kd subunit A2cp1_3742 SM00972 Spore Coat Protein U domain A2cp1_3743 SM00972 Spore Coat Protein U domain A2cp1_3749 SM00478 endonuclease III A2cp1_3752 SM00852 Probable molybdopterin binding domain A2cp1_3756 SM00382 ATPases associated with a variety of cellular activities A2cp1_3757 SM00857 Resolvase, N terminal domain A2cp1_3765 SM00507 HNH nucleases A2cp1_3772 SM00986 Uracil DNA glycosylase superfamily A2cp1_3772 SM00987 UreE urease accessory protein, C-terminal domain A2cp1_3775 SM00960 Roadblock/LC7 domain A2cp1_3776 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A2cp1_3776 SM00493 A2cp1_3776 A2cp1_3778 SM00382 ATPases associated with a variety of cellular activities A2cp1_3781 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_3785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_3788 SM00710 Parallel beta-helix repeats A2cp1_3790 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_3791 SM00240 Forkhead associated domain A2cp1_3792 SM00382 ATPases associated with a variety of cellular activities A2cp1_3814 SM00316 Ribosomal protein S1-like RNA-binding domain A2cp1_3816 SM00642 Alpha-amylase domain A2cp1_3820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A2cp1_3826 SM00650 Ribosomal RNA adenine dimethylases A2cp1_3829 SM00028 Tetratricopeptide repeats A2cp1_3829 SM00448 cheY-homologous receiver domain A2cp1_3830 SM00271 DnaJ molecular chaperone homology domain A2cp1_3832 SM00331 Sigma factor PP2C-like phosphatases A2cp1_3832 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A2cp1_3835 SM00479 A2cp1_3835 A2cp1_3840 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_3844 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_3844 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3846 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3858 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_3858 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3858 SM01049 A2cp1_3858 A2cp1_3861 SM00849 Metallo-beta-lactamase superfamily A2cp1_3862 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A2cp1_3863 SM00100 Cyclic nucleotide-monophosphate binding domain A2cp1_3864 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_3864 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A2cp1_3864 SM00091 PAS domain A2cp1_3864 SM00387 Histidine kinase-like ATPases A2cp1_3864 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3869 SM00091 PAS domain A2cp1_3869 SM00387 Histidine kinase-like ATPases A2cp1_3869 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3870 SM00382 ATPases associated with a variety of cellular activities A2cp1_3870 SM00448 cheY-homologous receiver domain A2cp1_3882 SM00240 Forkhead associated domain A2cp1_3886 SM00448 cheY-homologous receiver domain A2cp1_3887 SM00822 A2cp1_3887 A2cp1_3892 SM00382 ATPases associated with a variety of cellular activities A2cp1_3905 SM00740 A2cp1_3905 A2cp1_3917 SM00842 Cell division protein FtsA A2cp1_3918 SM00864 Tubulin/FtsZ family, GTPase domain A2cp1_3918 SM00865 Tubulin/FtsZ family, C-terminal domain A2cp1_3921 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_3925 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A2cp1_3930 SM00382 ATPases associated with a variety of cellular activities A2cp1_3932 SM00257 Lysin motif A2cp1_3937 SM00421 helix_turn_helix, Lux Regulon A2cp1_3939 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A2cp1_3939 SM00245 tail specific protease A2cp1_3940 SM00028 Tetratricopeptide repeats A2cp1_3954 SM00028 Tetratricopeptide repeats A2cp1_3956 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A2cp1_3967 SM00867 YceI-like domain A2cp1_3977 SM00567 E-Z type HEAT repeats A2cp1_3980 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_3980 SM01091 Transporter associated domain A2cp1_3982 SM01211 A2cp1_3982 A2cp1_3985 SM00448 cheY-homologous receiver domain A2cp1_3996 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_3996 SM00387 Histidine kinase-like ATPases A2cp1_3996 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_3997 SM00448 cheY-homologous receiver domain A2cp1_3997 SM00862 Transcriptional regulatory protein, C terminal A2cp1_4002 SM00487 DEAD-like helicases superfamily A2cp1_4011 SM00487 DEAD-like helicases superfamily A2cp1_4011 SM00490 helicase superfamily c-terminal domain A2cp1_4019 SM00487 DEAD-like helicases superfamily A2cp1_4019 SM00490 helicase superfamily c-terminal domain A2cp1_4030 SM00729 Elongator protein 3, MiaB family, Radical SAM A2cp1_4036 SM00448 cheY-homologous receiver domain A2cp1_4039 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_4039 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_4041 SM00822 A2cp1_4041 A2cp1_4041 SM00825 Beta-ketoacyl synthase A2cp1_4041 SM00826 A2cp1_4041 A2cp1_4042 SM00825 Beta-ketoacyl synthase A2cp1_4042 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A2cp1_4055 SM00382 ATPases associated with a variety of cellular activities A2cp1_4057 SM00382 ATPases associated with a variety of cellular activities A2cp1_4067 SM00563 Phosphate acyltransferases A2cp1_4070 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A2cp1_4070 SM01232 A2cp1_4070 A2cp1_4071 SM00919 Malic enzyme, NAD binding domain A2cp1_4071 SM01274 A2cp1_4071 A2cp1_4076 SM00507 HNH nucleases A2cp1_4081 SM00382 ATPases associated with a variety of cellular activities A2cp1_4083 SM00463 Small MutS-related domain A2cp1_4087 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_4087 SM00924 MgtE intracellular N domain A2cp1_4088 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A2cp1_4097 SM00138 Methyltransferase, chemotaxis proteins A2cp1_4098 SM00260 Two component signalling adaptor domain A2cp1_4099 SM01321 A2cp1_4099 A2cp1_4108 SM00382 ATPases associated with a variety of cellular activities A2cp1_4110 SM00567 E-Z type HEAT repeats A2cp1_4117 SM00986 Uracil DNA glycosylase superfamily A2cp1_4117 SM00987 UreE urease accessory protein, C-terminal domain A2cp1_4129 SM00507 HNH nucleases A2cp1_4130 SM00382 ATPases associated with a variety of cellular activities A2cp1_4133 SM01321 A2cp1_4133 A2cp1_4138 SM00382 ATPases associated with a variety of cellular activities A2cp1_4143 SM00014 Acid phosphatase homologues A2cp1_4145 SM00382 ATPases associated with a variety of cellular activities A2cp1_4150 SM00387 Histidine kinase-like ATPases A2cp1_4150 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4151 SM00448 cheY-homologous receiver domain A2cp1_4151 SM00862 Transcriptional regulatory protein, C terminal A2cp1_4153 SM00267 diguanylate cyclase A2cp1_4154 SM00981 A2cp1_4154 A2cp1_4160 SM00507 HNH nucleases A2cp1_4164 SM00450 Rhodanese Homology Domain A2cp1_4185 SM00507 HNH nucleases A2cp1_4209 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_4212 SM00116 Domain in cystathionine beta-synthase and other proteins. A2cp1_4213 SM01007 Class II Aldolase and Adducin N-terminal domain A2cp1_4217 SM01130 A2cp1_4217 A2cp1_4224 SM00460 Transglutaminase/protease-like homologues A2cp1_4233 SM00829 Enoylreductase A2cp1_4246 SM00220 Serine/Threonine protein kinases, catalytic domain A2cp1_4259 SM00347 helix_turn_helix multiple antibiotic resistance protein A2cp1_4262 SM00507 HNH nucleases A2cp1_4267 SM00671 Sel1-like repeats. A2cp1_4269 SM00448 cheY-homologous receiver domain A2cp1_4275 SM00091 PAS domain A2cp1_4275 SM00387 Histidine kinase-like ATPases A2cp1_4275 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4275 SM00448 cheY-homologous receiver domain A2cp1_4276 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_4276 SM00387 Histidine kinase-like ATPases A2cp1_4276 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4276 SM00448 cheY-homologous receiver domain A2cp1_4280 SM00642 Alpha-amylase domain A2cp1_4281 SM00507 HNH nucleases A2cp1_4290 SM00382 ATPases associated with a variety of cellular activities A2cp1_4291 SM00642 Alpha-amylase domain A2cp1_4295 SM00448 cheY-homologous receiver domain A2cp1_4299 SM00563 Phosphate acyltransferases A2cp1_4308 SM00382 ATPases associated with a variety of cellular activities A2cp1_4321 SM00382 ATPases associated with a variety of cellular activities A2cp1_4341 SM00845 GatB domain A2cp1_4345 SM00028 Tetratricopeptide repeats A2cp1_4346 SM00843 A2cp1_4346 A2cp1_4349 SM01207 A2cp1_4349 A2cp1_4354 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A2cp1_4356 SM00448 cheY-homologous receiver domain A2cp1_4358 SM00411 bacterial (prokaryotic) histone like domain A2cp1_4365 SM00564 beta-propeller repeat A2cp1_4368 SM00448 cheY-homologous receiver domain A2cp1_4373 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A2cp1_4373 SM00091 PAS domain A2cp1_4373 SM00387 Histidine kinase-like ATPases A2cp1_4373 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4373 SM00448 cheY-homologous receiver domain A2cp1_4374 SM00014 Acid phosphatase homologues A2cp1_4375 SM00463 Small MutS-related domain A2cp1_4376 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A2cp1_4378 SM00091 PAS domain A2cp1_4378 SM00387 Histidine kinase-like ATPases A2cp1_4378 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4378 SM00448 cheY-homologous receiver domain A2cp1_4381 SM00387 Histidine kinase-like ATPases A2cp1_4381 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4382 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_4382 SM00387 Histidine kinase-like ATPases A2cp1_4382 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4392 SM00849 Metallo-beta-lactamase superfamily A2cp1_4396 SM00382 ATPases associated with a variety of cellular activities A2cp1_4396 SM00448 cheY-homologous receiver domain A2cp1_4397 SM00382 ATPases associated with a variety of cellular activities A2cp1_4398 SM00155 Phospholipase D. Active site motifs. A2cp1_4402 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_4402 SM00387 Histidine kinase-like ATPases A2cp1_4402 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4404 SM00938 Nitrogen regulatory protein P-II A2cp1_4405 SM00091 PAS domain A2cp1_4405 SM00387 Histidine kinase-like ATPases A2cp1_4405 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4406 SM00382 ATPases associated with a variety of cellular activities A2cp1_4406 SM00448 cheY-homologous receiver domain A2cp1_4408 SM01230 A2cp1_4408 A2cp1_4412 SM00382 ATPases associated with a variety of cellular activities A2cp1_4413 SM00382 ATPases associated with a variety of cellular activities A2cp1_4417 SM00448 cheY-homologous receiver domain A2cp1_4431 SM00226 Low molecular weight phosphatase family A2cp1_4451 SM00984 UDP binding domain A2cp1_4452 SM00507 HNH nucleases A2cp1_4460 SM00984 UDP binding domain A2cp1_4461 SM00464 Found in ATP-dependent protease La (LON) A2cp1_4467 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A2cp1_4467 SM00091 PAS domain A2cp1_4467 SM00387 Histidine kinase-like ATPases A2cp1_4467 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4469 SM01001 AIR carboxylase A2cp1_4471 SM00073 Histidine Phosphotransfer domain A2cp1_4471 SM00260 Two component signalling adaptor domain A2cp1_4471 SM00387 Histidine kinase-like ATPases A2cp1_4471 SM01231 A2cp1_4471 A2cp1_4472 SM00448 cheY-homologous receiver domain A2cp1_4473 SM00260 Two component signalling adaptor domain A2cp1_4474 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A2cp1_4474 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A2cp1_4476 SM00387 Histidine kinase-like ATPases A2cp1_4476 SM00388 His Kinase A (phosphoacceptor) domain A2cp1_4478 SM00491 A2cp1_4478 A2cp1_4482 SM00271 DnaJ molecular chaperone homology domain A2cp1_4487 SM00487 DEAD-like helicases superfamily A2cp1_4487 SM00490 helicase superfamily c-terminal domain A2cp1_4487 SM00982 A2cp1_4487 A2cp1_4487 SM01058 CarD-like/TRCF domain A2cp1_4501 SM00434 DNA Topoisomerase IV A2cp1_4503 SM00382 ATPases associated with a variety of cellular activities A2cp1_4509 SM00470 ParB-like nuclease domain A2cp1_4515 SM01234 A2cp1_4515