locus-tag	class	description
AMOR_00030	COG0656	L-ascorbic acid biosynthetic process
AMOR_00080	COG0741	lytic transglycosylase activity
AMOR_00130	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AMOR_00150	COG0577	efflux transmembrane transporter activity
AMOR_00190	COG2132	Multicopper oxidase
AMOR_00210	COG1136	(ABC) transporter
AMOR_00250	COG0351	phosphomethylpyrimidine kinase
AMOR_00300	COG3033	Beta-eliminating lyase
AMOR_00350	COG1164	Oligoendopeptidase f
AMOR_00370	COG1620	l-lactate permease
AMOR_00380	COG0247	lactate metabolic process
AMOR_00390	COG1139	Iron-sulfur cluster binding protein
AMOR_00460	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMOR_00490	COG0840	transmembrane signaling receptor activity
AMOR_00500	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AMOR_00500	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AMOR_00530	COG0473	3-isopropylmalate dehydrogenase activity
AMOR_00540	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMOR_00610	COG4302	ethanolamine ammonia-lyase activity
AMOR_00620	COG0667	Aldo Keto reductase
AMOR_00630	COG0328	RNA-DNA hybrid ribonuclease activity
AMOR_00650	COG2195	Cleaves the N-terminal amino acid of tripeptides
AMOR_00670	COG1960	acyl-CoA dehydrogenase activity
AMOR_00680	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AMOR_00710	COG2204	response regulator
AMOR_00770	COG2226	methyltransferase
AMOR_00790	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMOR_00800	COG2201	protein-glutamate methylesterase activity
AMOR_00810	COG0643	Histidine kinase
AMOR_00810	COG2198	Histidine kinase
AMOR_00830	COG0457	Tetratricopeptide repeat
AMOR_00830	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMOR_00850	COG2201	protein-glutamate methylesterase activity
AMOR_00910	COG3064	Membrane
AMOR_00910	COG0437	4 iron, 4 sulfur cluster binding
AMOR_00930	COG3284	Transcriptional regulator
AMOR_01010	COG1201	RNA secondary structure unwinding
AMOR_01040	COG0156	8-amino-7-oxononanoate synthase activity
AMOR_01050	COG1063	alcohol dehydrogenase
AMOR_01080	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AMOR_01140	COG2204	response regulator
AMOR_01150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_01150	COG4191	Histidine kinase
AMOR_01160	COG0670	Belongs to the BI1 family
AMOR_01170	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMOR_01210	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AMOR_01220	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMOR_01230	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMOR_01260	COG1942	4-Oxalocrotonate Tautomerase
AMOR_01270	COG1595	DNA-templated transcription, initiation
AMOR_01310	COG3123	guanosine phosphorylase activity
AMOR_01340	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMOR_01370	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMOR_01390	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_01400	COG0577	efflux transmembrane transporter activity
AMOR_01400	COG1136	(ABC) transporter
AMOR_01410	COG0577	efflux transmembrane transporter activity
AMOR_01410	COG1136	(ABC) transporter
AMOR_01430	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AMOR_01440	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMOR_01470	COG0252	asparaginase activity
AMOR_01480	COG0488	(ABC) transporter
AMOR_01530	COG0745	RESPONSE REGULATOR receiver
AMOR_01570	COG0488	(ABC) transporter
AMOR_01620	COG2050	protein possibly involved in aromatic compounds catabolism
AMOR_01670	COG1648	precorrin-2 dehydrogenase activity
AMOR_01670	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AMOR_01680	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMOR_01690	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AMOR_01720	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMOR_01730	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMOR_01750	COG0175	sulfate reduction
AMOR_01760	COG2895	sulfate adenylyltransferase (ATP) activity
AMOR_01770	COG0175	sulfate reduction
AMOR_01780	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AMOR_01790	COG4208	sulfate ABC transporter
AMOR_01800	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AMOR_01830	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AMOR_01840	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AMOR_01890	COG2885	chlorophyll binding
AMOR_01910	COG2391	methyltransferase activity
AMOR_01940	COG4214	carbohydrate transport
AMOR_01960	COG4213	ABC transporter substrate-binding protein
AMOR_02020	COG4964	Belongs to the GSP D family
AMOR_02120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AMOR_02140	COG2070	2-Nitropropane dioxygenase
AMOR_02190	COG0058	SHG alpha-glucan phosphorylase activity
AMOR_02260	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMOR_02310	COG0745	RESPONSE REGULATOR receiver
AMOR_02320	COG1064	alcohol dehydrogenase
AMOR_02330	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_02340	COG2271	Major facilitator Superfamily
AMOR_02360	COG1309	transcriptional regulator
AMOR_02420	COG1869	D-ribose catabolic process
AMOR_02430	COG1129	ABC transporter
AMOR_02440	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMOR_02450	COG1879	ABC-type sugar transport system periplasmic component
AMOR_02500	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMOR_02530	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_02580	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMOR_02620	COG0667	Aldo Keto reductase
AMOR_02670	COG1140	nitrate reductase beta subunit
AMOR_02690	COG2223	nitrite transmembrane transporter activity
AMOR_02720	COG4191	Histidine kinase
AMOR_02740	COG3845	ABC transporter
AMOR_02750	COG4603	Belongs to the binding-protein-dependent transport system permease family
AMOR_02780	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AMOR_02860	COG0574	Belongs to the PEP-utilizing enzyme family
AMOR_02860	COG3848	Pyruvate phosphate dikinase
AMOR_02900	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AMOR_02920	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMOR_02950	COG0149	triose-phosphate isomerase activity
AMOR_02960	COG1461	Dihydroxyacetone kinase
AMOR_02970	COG2376	Dihydroxyacetone kinase
AMOR_02980	COG0698	ribose 5-phosphate isomerase
AMOR_03000	COG0366	Alpha amylase catalytic
AMOR_03010	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMOR_03030	COG0683	leucine binding
AMOR_03090	COG0366	Alpha amylase catalytic
AMOR_03100	COG0438	transferase activity, transferring glycosyl groups
AMOR_03110	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMOR_03120	COG1881	PFAM PEBP family protein
AMOR_03130	COG5322	oxidoreductase activity
AMOR_03130	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AMOR_03140	COG0667	Aldo Keto reductase
AMOR_03150	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AMOR_03180	COG0217	transcriptional regulatory protein
AMOR_03190	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AMOR_03200	COG2204	response regulator
AMOR_03210	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_03210	COG4191	Histidine kinase
AMOR_03260	COG0667	Aldo Keto reductase
AMOR_03280	COG2204	response regulator
AMOR_03310	COG0745	RESPONSE REGULATOR receiver
AMOR_03330	COG1252	NADH dehydrogenase
AMOR_03340	COG0596	Alpha beta hydrolase
AMOR_03410	COG0137	argininosuccinate synthase activity
AMOR_03420	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
AMOR_03460	COG0745	RESPONSE REGULATOR receiver
AMOR_03470	COG5002	protein histidine kinase activity
AMOR_03490	COG1297	OPT oligopeptide transporter protein
AMOR_03520	COG0423	glycine-tRNA ligase activity
AMOR_03600	COG4941	Belongs to the sigma-70 factor family
AMOR_03610	COG3795	YCII-related domain
AMOR_03630	COG0039	L-malate dehydrogenase activity
AMOR_03710	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AMOR_03730	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AMOR_03740	COG0375	protein maturation
AMOR_03750	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AMOR_03760	COG0298	carbon dioxide binding
AMOR_03780	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AMOR_03800	COG3118	belongs to the thioredoxin family
AMOR_03810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMOR_03830	COG3794	PFAM blue (type 1) copper domain protein
AMOR_03870	COG2132	Multicopper oxidase
AMOR_03950	COG2132	Multicopper oxidase
AMOR_03950	COG2132	Multicopper oxidase
AMOR_03980	COG2259	Doxx family
AMOR_03990	COG0730	response to heat
AMOR_04090	COG1063	alcohol dehydrogenase
AMOR_04110	COG2376	Dihydroxyacetone kinase
AMOR_04120	COG0698	ribose 5-phosphate isomerase
AMOR_04140	COG1063	alcohol dehydrogenase
AMOR_04160	COG1653	transport
AMOR_04170	COG1175	transmembrane transport
AMOR_04190	COG3842	ATPase activity
AMOR_04210	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_04280	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMOR_04280	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMOR_04340	COG1136	(ABC) transporter
AMOR_04360	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMOR_04400	COG0443	Heat shock 70 kDa protein
AMOR_04430	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AMOR_04430	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AMOR_04450	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMOR_04450	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMOR_04480	COG0667	Aldo Keto reductase
AMOR_04520	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
AMOR_04560	COG1269	ATP hydrolysis coupled proton transport
AMOR_04570	COG1394	ATPase activity, coupled to movement of substances
AMOR_04600	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
AMOR_04620	COG1388	LysM domain
AMOR_04620	COG1376	ErfK ybiS ycfS ynhG family protein
AMOR_04660	COG0840	transmembrane signaling receptor activity
AMOR_04710	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMOR_04800	COG0644	oxidoreductase
AMOR_04810	COG1966	Carbon starvation protein
AMOR_04890	COG0596	Alpha beta hydrolase
AMOR_04960	COG0247	lactate metabolic process
AMOR_04960	COG2181	nitrate reductase activity
AMOR_04980	COG2086	electron transfer activity
AMOR_04990	COG1902	pentaerythritol trinitrate reductase activity
AMOR_04990	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMOR_05000	COG1960	acyl-CoA dehydrogenase activity
AMOR_05010	COG0183	Belongs to the thiolase family
AMOR_05020	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMOR_05020	COG1024	Enoyl-CoA hydratase
AMOR_05060	COG1368	sulfuric ester hydrolase activity
AMOR_05070	COG2264	protein methyltransferase activity
AMOR_05120	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMOR_05130	COG2124	cytochrome p450
AMOR_05140	COG0644	oxidoreductase
AMOR_05190	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AMOR_05200	COG1127	ABC transporter
AMOR_05240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_05270	COG4221	oxidoreductase activity
AMOR_05330	COG1959	2 iron, 2 sulfur cluster binding
AMOR_05340	COG3576	pyridoxamine 5-phosphate
AMOR_05370	COG2226	methyltransferase
AMOR_05420	COG0583	DNA-binding transcription factor activity
AMOR_05510	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AMOR_05540	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AMOR_05570	COG3746	phosphate-selective porin O and P
AMOR_05590	COG1804	L-carnitine dehydratase bile acid-inducible protein F
AMOR_05610	COG0745	RESPONSE REGULATOR receiver
AMOR_05610	COG4566	intracellular signal transduction
AMOR_05660	COG0519	Catalyzes the synthesis of GMP from XMP
AMOR_05660	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AMOR_05670	COG0517	IMP dehydrogenase activity
AMOR_05670	COG0516	GMP reductase activity
AMOR_05680	COG0443	Heat shock 70 kDa protein
AMOR_05690	COG0586	Pfam SNARE associated Golgi protein
AMOR_05700	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AMOR_05710	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AMOR_05760	COG0501	Belongs to the peptidase M48B family
AMOR_05860	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMOR_05900	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AMOR_05910	COG0183	Belongs to the thiolase family
AMOR_05940	COG0330	HflC and HflK could
AMOR_05960	COG1573	uracil-dna glycosylase
AMOR_05990	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMOR_06070	COG1595	DNA-templated transcription, initiation
AMOR_06090	COG0745	RESPONSE REGULATOR receiver
AMOR_06130	COG0728	peptidoglycan biosynthetic process
AMOR_06170	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AMOR_06170	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AMOR_06190	COG0525	valine-tRNA ligase activity
AMOR_06230	COG1070	Carbohydrate kinase
AMOR_06270	COG3842	ATPase activity
AMOR_06300	COG0246	Mannitol dehydrogenase
AMOR_06340	COG0459	protein refolding
AMOR_06360	COG1752	Esterase of the alpha-beta hydrolase superfamily
AMOR_06370	COG0542	response to heat
AMOR_06420	COG3876	Protein conserved in bacteria
AMOR_06470	COG1595	DNA-templated transcription, initiation
AMOR_06500	COG0438	transferase activity, transferring glycosyl groups
AMOR_06540	COG1193	negative regulation of DNA recombination
AMOR_06580	COG4177	L-phenylalanine transmembrane transporter activity
AMOR_06590	COG0411	ABC transporter
AMOR_06610	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AMOR_06620	COG0842	Transport permease protein
AMOR_06630	COG1129	ABC transporter
AMOR_06630	COG0842	Transport permease protein
AMOR_06640	COG1131	(ABC) transporter
AMOR_06650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_06660	COG0730	response to heat
AMOR_06680	COG0557	exoribonuclease II activity
AMOR_06720	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AMOR_06950	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMOR_06980	COG0113	porphobilinogen synthase activity
AMOR_07010	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMOR_07070	COG0438	transferase activity, transferring glycosyl groups
AMOR_07140	COG0138	bifunctional purine biosynthesis protein purh
AMOR_07150	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMOR_07220	COG0312	modulator of DNA gyrase
AMOR_07300	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AMOR_07320	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMOR_07320	COG2022	thiamine diphosphate biosynthetic process
AMOR_07330	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMOR_07430	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMOR_07440	COG0585	pseudouridine synthase activity
AMOR_07460	COG1587	Uroporphyrinogen-III synthase
AMOR_07470	COG0181	hydroxymethylbilane synthase activity
AMOR_07480	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AMOR_07510	COG3118	belongs to the thioredoxin family
AMOR_07520	COG0772	Belongs to the SEDS family
AMOR_07530	COG0768	penicillin binding
AMOR_07560	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMOR_07650	COG1830	Aldolase
AMOR_07670	COG1074	ATP-dependent DNA helicase activity
AMOR_07680	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
AMOR_07710	COG0352	thiamine-phosphate diphosphorylase activity
AMOR_07760	COG2022	thiamine diphosphate biosynthetic process
AMOR_07800	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMOR_07870	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMOR_07920	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AMOR_07970	COG0604	alcohol dehydrogenase
AMOR_07980	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AMOR_07980	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
AMOR_08000	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMOR_08010	COG3285	dna ligase
AMOR_08010	COG1793	dna ligase
AMOR_08020	COG1793	dna ligase
AMOR_08050	COG0310	cobalt ion transport
AMOR_08070	COG1122	ATPase activity
AMOR_08080	COG0864	Transcriptional regulator
AMOR_08100	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AMOR_08110	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMOR_08120	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AMOR_08130	COG1862	Preprotein translocase
AMOR_08140	COG0343	queuine tRNA-ribosyltransferase activity
AMOR_08160	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
AMOR_08170	COG2385	sporulation resulting in formation of a cellular spore
AMOR_08180	COG0586	Pfam SNARE associated Golgi protein
AMOR_08260	COG0011	TIGRFAM Protein of
AMOR_08330	COG0667	Aldo Keto reductase
AMOR_08360	COG0521	Mo-molybdopterin cofactor biosynthetic process
AMOR_08380	COG1796	DNA polymerase
AMOR_08380	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AMOR_08390	COG2814	Major facilitator Superfamily
AMOR_08420	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08430	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AMOR_08440	COG1034	ATP synthesis coupled electron transport
AMOR_08460	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08470	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08490	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08500	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08510	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08520	COG0649	NAD binding
AMOR_08530	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AMOR_08540	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_08560	COG0713	ATP synthesis coupled electron transport
AMOR_08570	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AMOR_08590	COG1007	ATP synthesis coupled electron transport
AMOR_08600	COG0613	PHP domain protein
AMOR_08610	COG1959	2 iron, 2 sulfur cluster binding
AMOR_08620	COG1899	peptidyl-lysine modification to peptidyl-hypusine
AMOR_08630	COG0010	Belongs to the arginase family
AMOR_08640	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMOR_08660	COG0484	heat shock protein binding
AMOR_08670	COG0443	Heat shock 70 kDa protein
AMOR_08690	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AMOR_08730	COG1355	regulation of microtubule-based process
AMOR_08780	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMOR_08810	COG2814	Major facilitator Superfamily
AMOR_08820	COG0583	DNA-binding transcription factor activity
AMOR_08830	COG2010	Cytochrome c
AMOR_08840	COG3256	nitric oxide reductase
AMOR_08860	COG0492	ferredoxin-NADP+ reductase activity
AMOR_08870	COG4191	Histidine kinase
AMOR_08930	COG0114	fumarate hydratase activity
AMOR_08980	COG1049	propionate catabolic process, 2-methylcitrate cycle
AMOR_09010	COG2217	Heavy metal translocating P-type atpase
AMOR_09040	COG0348	domain, Protein
AMOR_09080	COG3278	Belongs to the heme-copper respiratory oxidase family
AMOR_09090	COG4191	Histidine kinase
AMOR_09100	COG0243	molybdopterin cofactor binding
AMOR_09120	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_09140	COG3875	lactate racemase activity
AMOR_09150	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_09200	COG0745	RESPONSE REGULATOR receiver
AMOR_09210	COG3108	Peptidase M15
AMOR_09230	COG2205	protein histidine kinase activity
AMOR_09240	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AMOR_09250	COG1027	Aspartate ammonia-lyase
AMOR_09260	COG0252	asparaginase activity
AMOR_09280	COG2985	domain, Protein
AMOR_09370	COG0745	RESPONSE REGULATOR receiver
AMOR_09370	COG2205	protein histidine kinase activity
AMOR_09370	COG4191	Histidine kinase
AMOR_09410	COG1309	transcriptional regulator
AMOR_09500	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_09510	COG1100	Small GTP-binding protein
AMOR_09580	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AMOR_09630	COG1408	metallophosphoesterase
AMOR_09690	COG1607	acyl-coa hydrolase
AMOR_09700	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
AMOR_09710	COG0616	signal peptide processing
AMOR_09720	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AMOR_09780	COG1324	tolerance protein
AMOR_09810	COG2205	protein histidine kinase activity
AMOR_09820	COG2205	protein histidine kinase activity
AMOR_09820	COG2202	Pas domain
AMOR_09900	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AMOR_09910	COG0288	reversible hydration of carbon dioxide
AMOR_09940	COG2816	NAD+ diphosphatase activity
AMOR_09950	COG2078	PFAM AMMECR1 domain protein
AMOR_09990	COG0745	RESPONSE REGULATOR receiver
AMOR_10020	COG0546	phosphoglycolate phosphatase activity
AMOR_10040	COG1595	DNA-templated transcription, initiation
AMOR_10070	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMOR_10120	COG5002	protein histidine kinase activity
AMOR_10160	COG2204	response regulator
AMOR_10170	COG4191	Histidine kinase
AMOR_10180	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMOR_10200	COG1185	polyribonucleotide nucleotidyltransferase activity
AMOR_10210	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMOR_10220	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMOR_10230	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMOR_10270	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMOR_10270	COG0195	Participates in both transcription termination and antitermination
AMOR_10280	COG0779	Required for maturation of 30S ribosomal subunits
AMOR_10310	COG0142	geranyltranstransferase activity
AMOR_10320	COG0745	RESPONSE REGULATOR receiver
AMOR_10330	COG1722	exodeoxyribonuclease VII activity
AMOR_10340	COG1570	exodeoxyribonuclease VII activity
AMOR_10370	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AMOR_10380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AMOR_10390	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AMOR_10410	COG0535	radical SAM domain protein
AMOR_10430	COG3494	Protein of unknown function (DUF1009)
AMOR_10460	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AMOR_10480	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AMOR_10490	COG1136	(ABC) transporter
AMOR_10520	COG3431	PFAM Phosphate-starvation-inducible E
AMOR_10540	COG1139	Iron-sulfur cluster binding protein
AMOR_10550	COG1556	Lactate utilization protein
AMOR_10560	COG1620	l-lactate permease
AMOR_10580	COG3842	ATPase activity
AMOR_10620	COG3279	Response regulator of the LytR AlgR family
AMOR_10630	COG3275	phosphorelay sensor kinase activity
AMOR_10640	COG1543	Belongs to the glycosyl hydrolase 57 family
AMOR_10690	COG5000	phosphorelay sensor kinase activity
AMOR_10710	COG4221	oxidoreductase activity
AMOR_10720	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMOR_10740	COG1132	(ABC) transporter
AMOR_10750	COG2205	protein histidine kinase activity
AMOR_10790	COG0673	inositol 2-dehydrogenase activity
AMOR_10810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_10890	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMOR_10910	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMOR_10930	COG0243	molybdopterin cofactor binding
AMOR_11000	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMOR_11120	COG1595	DNA-templated transcription, initiation
AMOR_11140	COG4968	Prepilin-type N-terminal cleavage methylation domain
AMOR_11190	COG2814	Major facilitator Superfamily
AMOR_11200	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMOR_11260	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMOR_11280	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMOR_11360	COG1489	DNA binding
AMOR_11390	COG2267	carboxylic ester hydrolase activity
AMOR_11500	COG2197	response regulator
AMOR_11510	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AMOR_11620	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMOR_11650	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMOR_11660	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMOR_11670	COG5002	protein histidine kinase activity
AMOR_11750	COG4139	cobalamin transport
AMOR_11760	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AMOR_11790	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AMOR_11880	COG2096	Adenosyltransferase
AMOR_11900	COG0316	Belongs to the HesB IscA family
AMOR_11910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMOR_11920	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AMOR_11940	COG0746	molybdenum cofactor guanylyltransferase activity
AMOR_11960	COG1131	(ABC) transporter
AMOR_12000	COG1067	ATP-dependent peptidase activity
AMOR_12020	COG0517	IMP dehydrogenase activity
AMOR_12020	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AMOR_12020	COG0617	tRNA 3'-terminal CCA addition
AMOR_12080	COG0745	RESPONSE REGULATOR receiver
AMOR_12130	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMOR_12140	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_12160	COG1304	FMN binding
AMOR_12170	COG3573	Dehydrogenase
AMOR_12180	COG1562	ergosterol biosynthetic process
AMOR_12190	COG1657	PFAM Prenyltransferase squalene oxidase
AMOR_12220	COG3394	polysaccharide catabolic process
AMOR_12380	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMOR_12390	COG2226	methyltransferase
AMOR_12440	COG3118	belongs to the thioredoxin family
AMOR_12500	COG2204	response regulator
AMOR_12510	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMOR_12520	COG1980	fructose-bisphosphate aldolase activity
AMOR_12530	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMOR_12550	COG0022	dehydrogenase e1 component
AMOR_12550	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMOR_12560	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AMOR_12570	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMOR_12590	COG4572	Cation transport regulator
AMOR_12600	COG2205	protein histidine kinase activity
AMOR_12610	COG0745	RESPONSE REGULATOR receiver
AMOR_12670	COG1595	DNA-templated transcription, initiation
AMOR_12680	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AMOR_12690	COG1121	(ABC) transporter
AMOR_12700	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMOR_12710	COG0574	Belongs to the PEP-utilizing enzyme family
AMOR_12710	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMOR_12730	COG1796	DNA polymerase
AMOR_12730	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
AMOR_12800	COG0517	IMP dehydrogenase activity
AMOR_12800	COG1994	Peptidase M50
AMOR_12840	COG0589	response to stress
AMOR_12870	COG0438	transferase activity, transferring glycosyl groups
AMOR_12890	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMOR_12920	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMOR_12930	COG1086	Polysaccharide biosynthesis protein
AMOR_12940	COG0489	protein tyrosine kinase activity
AMOR_12940	COG3206	protein involved in exopolysaccharide biosynthesis
AMOR_12970	COG0438	transferase activity, transferring glycosyl groups
AMOR_13020	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_13030	COG0517	IMP dehydrogenase activity
AMOR_13040	COG0459	protein refolding
AMOR_13070	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AMOR_13110	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
AMOR_13120	COG0723	plastoquinol--plastocyanin reductase activity
AMOR_13130	COG2181	nitrate reductase activity
AMOR_13160	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AMOR_13180	COG0728	peptidoglycan biosynthetic process
AMOR_13200	COG0642	Histidine kinase
AMOR_13210	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMOR_13220	COG2059	Chromate
AMOR_13350	COG0667	Aldo Keto reductase
AMOR_13360	COG0363	glucosamine-6-phosphate deaminase activity
AMOR_13380	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AMOR_13390	COG1063	alcohol dehydrogenase
AMOR_13440	COG1127	ABC transporter
AMOR_13450	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AMOR_13640	COG4251	negative regulation of phosphorylation
AMOR_13650	COG2855	membrane
AMOR_13710	COG1993	acr, cog1993
AMOR_13760	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMOR_13770	COG3604	Transcriptional regulator
AMOR_13800	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_13820	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
AMOR_13840	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
AMOR_13850	COG1116	anion transmembrane transporter activity
AMOR_13860	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMOR_13870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMOR_13880	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AMOR_13920	COG2855	membrane
AMOR_14020	COG2010	Cytochrome c
AMOR_14030	COG2204	response regulator
AMOR_14080	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMOR_14090	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMOR_14100	COG2226	methyltransferase
AMOR_14120	COG2267	carboxylic ester hydrolase activity
AMOR_14170	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
AMOR_14190	COG1024	Enoyl-CoA hydratase
AMOR_14200	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMOR_14220	COG1960	acyl-CoA dehydrogenase activity
AMOR_14260	COG4319	ketosteroid isomerase
AMOR_14310	COG4974	Belongs to the 'phage' integrase family
AMOR_14330	COG4974	Belongs to the 'phage' integrase family
AMOR_14360	COG0739	heme binding
AMOR_14360	COG0741	lytic transglycosylase activity
AMOR_14360	COG1196	nuclear chromosome segregation
AMOR_14390	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMOR_14490	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMOR_14500	COG1090	epimerase
AMOR_14530	COG0750	zinc metalloprotease
AMOR_14560	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMOR_14620	COG1758	RNA polymerase activity
AMOR_14650	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMOR_14660	COG0459	protein refolding
AMOR_14720	COG0167	dihydroorotate dehydrogenase activity
AMOR_14720	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AMOR_14750	COG1953	Uracil, thiamine, allantoin
AMOR_14770	COG1309	transcriptional regulator
AMOR_14790	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AMOR_14810	COG1917	Cupin 2, conserved barrel domain protein
AMOR_14810	COG1396	sequence-specific DNA binding
AMOR_14820	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMOR_14830	COG2132	Multicopper oxidase
AMOR_14880	COG0411	ABC transporter
AMOR_14900	COG0559	Belongs to the binding-protein-dependent transport system permease family
AMOR_14950	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMOR_14960	COG0798	PFAM Bile acid sodium symporter
AMOR_14980	COG4651	solute:proton antiporter activity
AMOR_14980	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AMOR_15010	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMOR_15010	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMOR_15170	COG1183	phosphatidylcholine synthase activity
AMOR_15190	COG1058	Belongs to the CinA family
AMOR_15190	COG1546	Belongs to the CinA family
AMOR_15270	COG1573	uracil-dna glycosylase
AMOR_15280	COG1596	polysaccharide export
AMOR_15400	COG1100	Small GTP-binding protein
AMOR_15430	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMOR_15440	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMOR_15450	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMOR_15460	COG0590	tRNA wobble adenosine to inosine editing
AMOR_15480	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMOR_15480	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMOR_15500	COG0585	pseudouridine synthase activity
AMOR_15530	COG0745	RESPONSE REGULATOR receiver
AMOR_15540	COG2261	transglycosylase associated protein
AMOR_15550	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_15560	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_15560	COG0649	NAD binding
AMOR_15560	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_15570	COG1007	ATP synthesis coupled electron transport
AMOR_15600	COG0651	ATP synthesis coupled electron transport
AMOR_15620	COG2204	response regulator
AMOR_15630	COG0651	ATP synthesis coupled electron transport
AMOR_15660	COG0651	ATP synthesis coupled electron transport
AMOR_15670	COG0649	NAD binding
AMOR_15680	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AMOR_15740	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMOR_15750	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AMOR_15800	COG0739	heme binding
AMOR_15880	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AMOR_15890	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AMOR_15900	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AMOR_15910	COG1428	Deoxynucleoside kinase
AMOR_15960	COG0745	RESPONSE REGULATOR receiver
AMOR_15990	COG0484	heat shock protein binding
AMOR_16000	COG0631	protein serine/threonine phosphatase activity
AMOR_16010	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AMOR_16060	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMOR_16080	COG0477	Major facilitator Superfamily
AMOR_16150	COG0840	transmembrane signaling receptor activity
AMOR_16160	COG0840	transmembrane signaling receptor activity
AMOR_16180	COG0477	Major facilitator Superfamily
AMOR_16250	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMOR_16270	COG1902	pentaerythritol trinitrate reductase activity
AMOR_16310	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMOR_16320	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AMOR_16340	COG5002	protein histidine kinase activity
AMOR_16360	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
AMOR_16380	COG2267	carboxylic ester hydrolase activity
AMOR_16390	COG2226	methyltransferase
AMOR_16450	COG0515	serine threonine protein kinase
AMOR_16470	COG1024	Enoyl-CoA hydratase
AMOR_16500	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_16510	COG0697	spore germination
AMOR_16520	COG1350	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
AMOR_16540	COG2205	protein histidine kinase activity
AMOR_16580	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMOR_16630	COG0437	4 iron, 4 sulfur cluster binding
AMOR_16640	COG2864	formate dehydrogenase
AMOR_16660	COG1515	deoxyribonuclease V activity
AMOR_16700	COG3663	DNA glycosylase
AMOR_16730	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_16790	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMOR_16800	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AMOR_16820	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMOR_16850	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMOR_16870	COG1181	Belongs to the D-alanine--D-alanine ligase family
AMOR_16950	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMOR_17030	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMOR_17060	COG0220	tRNA (guanine-N7-)-methyltransferase activity
AMOR_17080	COG1136	(ABC) transporter
AMOR_17120	COG0741	lytic transglycosylase activity
AMOR_17120	COG1388	LysM domain
AMOR_17140	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AMOR_17160	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMOR_17180	COG0714	Associated with various cellular activities
AMOR_17260	COG3572	ergothioneine biosynthetic process
AMOR_17290	COG0793	Belongs to the peptidase S41A family
AMOR_17320	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AMOR_17390	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_17460	COG2027	D-alanyl-D-alanine carboxypeptidase
AMOR_17480	COG2198	Histidine kinase
AMOR_17480	COG2205	protein histidine kinase activity
AMOR_17480	COG0784	Response regulator, receiver
AMOR_17530	COG2201	protein-glutamate methylesterase activity
AMOR_17540	COG0840	transmembrane signaling receptor activity
AMOR_17580	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AMOR_17590	COG2003	Belongs to the UPF0758 family
AMOR_17630	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
AMOR_17640	COG2353	YceI-like domain
AMOR_17650	COG3384	dioxygenase
AMOR_17680	COG2171	N-acyltransferase activity
AMOR_17690	COG0436	Aminotransferase
AMOR_17730	COG1192	Involved in chromosome partitioning
AMOR_17780	COG4535	Mg2 and Co2 transporter CorC
AMOR_17790	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMOR_17800	COG0047	phosphoribosylformylglycinamidine synthase activity
AMOR_17850	COG0312	modulator of DNA gyrase
AMOR_17860	COG2267	carboxylic ester hydrolase activity
AMOR_17870	COG2852	Protein conserved in bacteria
AMOR_17890	COG0300	oxidoreductase activity
AMOR_17950	COG1595	DNA-templated transcription, initiation
AMOR_17960	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMOR_17970	COG2205	protein histidine kinase activity
AMOR_18000	COG0582	viral genome integration into host DNA
AMOR_18110	COG1201	RNA secondary structure unwinding
AMOR_18120	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMOR_18130	COG0218	Necessary for normal cell division and for the maintenance of normal septation
AMOR_18180	COG1002	Type II restriction enzyme, methylase subunits
AMOR_18250	COG0270	DNA (cytosine-5-)-methyltransferase activity
AMOR_18300	COG4584	PFAM Integrase catalytic
AMOR_18400	COG0417	DNA replication proofreading
AMOR_18580	COG3387	PFAM Glycoside hydrolase 15-related
AMOR_18590	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMOR_18640	COG2818	Glycosylase
AMOR_18660	COG2823	Periplasmic or secreted lipoprotein
AMOR_18730	COG0653	protein targeting
AMOR_18840	COG1129	ABC transporter
AMOR_18850	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMOR_18860	COG1879	ABC-type sugar transport system periplasmic component
AMOR_18890	COG0509	glycine decarboxylation via glycine cleavage system
AMOR_18910	COG1671	Belongs to the UPF0178 family
AMOR_18930	COG0509	glycine decarboxylation via glycine cleavage system
AMOR_18970	COG2239	Acts as a magnesium transporter
AMOR_18980	COG0617	tRNA 3'-terminal CCA addition
AMOR_18980	COG0517	IMP dehydrogenase activity
AMOR_18980	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
AMOR_19010	COG0557	exoribonuclease II activity
AMOR_19020	COG1611	Belongs to the LOG family
AMOR_19120	COG1595	DNA-templated transcription, initiation
AMOR_19150	COG1074	ATP-dependent DNA helicase activity
AMOR_19160	COG1595	DNA-templated transcription, initiation
AMOR_19190	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AMOR_19210	COG3608	succinylglutamate desuccinylase aspartoacylase
AMOR_19210	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
AMOR_19280	COG0644	oxidoreductase
AMOR_19290	COG0492	ferredoxin-NADP+ reductase activity
AMOR_19310	COG3604	Transcriptional regulator
AMOR_19380	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMOR_19390	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMOR_19410	COG3829	transcription factor binding
AMOR_19410	COG3290	protein histidine kinase activity
AMOR_19470	COG2217	Heavy metal translocating P-type atpase
AMOR_19520	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AMOR_19540	COG5522	Integral membrane protein (intg_mem_TP0381)
AMOR_19600	COG1278	Cold shock
AMOR_19650	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AMOR_19660	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMOR_19670	COG0488	(ABC) transporter
AMOR_19680	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_19710	COG0667	Aldo Keto reductase
AMOR_19720	COG0395	ABC-type sugar transport system, permease component
AMOR_19730	COG1175	transmembrane transport
AMOR_19750	COG1940	carbohydrate kinase activity
AMOR_19790	COG0437	4 iron, 4 sulfur cluster binding
AMOR_19800	COG0243	molybdopterin cofactor binding
AMOR_19860	COG0509	glycine decarboxylation via glycine cleavage system
AMOR_19880	COG5557	Pfam Polysulphide reductase, NrfD
AMOR_19890	COG3064	Membrane
AMOR_19890	COG0437	4 iron, 4 sulfur cluster binding
AMOR_19910	COG1278	Cold shock
AMOR_20020	COG2353	YceI-like domain
AMOR_20030	COG2353	YceI-like domain
AMOR_20100	COG1160	GTP binding
AMOR_20110	COG2815	serine threonine protein kinase
AMOR_20110	COG0515	serine threonine protein kinase
AMOR_20150	COG0420	3'-5' exonuclease activity
AMOR_20160	COG0419	ATPase involved in DNA repair
AMOR_20280	COG1846	Transcriptional regulator
AMOR_20300	COG0204	Acyl-transferase
AMOR_20310	COG1088	dTDP-glucose 4,6-dehydratase activity
AMOR_20330	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMOR_20340	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMOR_20360	COG3852	Histidine kinase
AMOR_20370	COG2204	response regulator
AMOR_20410	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AMOR_20430	COG0745	RESPONSE REGULATOR receiver
AMOR_20440	COG5002	protein histidine kinase activity
AMOR_20470	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMOR_20470	COG1024	Enoyl-CoA hydratase
AMOR_20480	COG0183	Belongs to the thiolase family
AMOR_20520	COG0723	plastoquinol--plastocyanin reductase activity
AMOR_20540	COG4555	ABC transporter
AMOR_20580	COG1741	Belongs to the pirin family
AMOR_20590	COG1234	tRNA 3'-trailer cleavage
AMOR_20660	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AMOR_20700	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_20720	COG1755	Isoprenylcysteine carboxyl methyltransferase
AMOR_20740	COG2205	protein histidine kinase activity
AMOR_20750	COG0542	response to heat
AMOR_20760	COG0463	Glycosyl transferase, family 2
AMOR_20800	COG2205	protein histidine kinase activity
AMOR_20820	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMOR_20930	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AMOR_20940	COG2226	methyltransferase
AMOR_20950	COG0163	prenyltransferase activity
AMOR_20960	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AMOR_20970	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
AMOR_20980	COG0402	S-adenosylhomocysteine deaminase activity
AMOR_21030	COG2890	protein-(glutamine-N5) methyltransferase activity
AMOR_21100	COG2226	methyltransferase
AMOR_21110	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMOR_21150	COG0436	Aminotransferase
AMOR_21170	COG3604	Transcriptional regulator
AMOR_21180	COG0745	RESPONSE REGULATOR receiver
AMOR_21190	COG5002	protein histidine kinase activity
AMOR_21240	COG1595	DNA-templated transcription, initiation
AMOR_21250	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AMOR_21260	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_21350	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AMOR_21480	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AMOR_21480	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AMOR_21500	COG0693	protein deglycase activity
AMOR_21510	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_21540	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AMOR_21550	COG0546	phosphoglycolate phosphatase activity
AMOR_21570	COG0045	succinate-CoA ligase (ADP-forming) activity
AMOR_21580	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AMOR_21610	COG0516	GMP reductase activity
AMOR_21620	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AMOR_21650	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMOR_21660	COG0531	amino acid
AMOR_21700	COG0745	RESPONSE REGULATOR receiver
AMOR_21710	COG0737	Belongs to the 5'-nucleotidase family
AMOR_21740	COG5557	Pfam Polysulphide reductase, NrfD
AMOR_21750	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AMOR_21760	COG0437	4 iron, 4 sulfur cluster binding
AMOR_21770	COG5557	Pfam Polysulphide reductase, NrfD
AMOR_21780	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AMOR_21870	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMOR_21930	COG2373	Large extracellular alpha-helical protein
AMOR_21940	COG4953	penicillin-binding protein 1C
AMOR_21960	COG0300	oxidoreductase activity
AMOR_21980	COG2204	response regulator
AMOR_21990	COG3852	Histidine kinase
AMOR_22010	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMOR_22040	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMOR_22070	COG0840	transmembrane signaling receptor activity
AMOR_22110	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMOR_22110	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMOR_22200	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AMOR_22200	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AMOR_22210	COG3639	organic phosphonate transmembrane transporter activity
AMOR_22220	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AMOR_22240	COG1960	acyl-CoA dehydrogenase activity
AMOR_22300	COG1529	Aldehyde oxidase and xanthine dehydrogenase
AMOR_22300	COG2010	Cytochrome c
AMOR_22390	COG3833	ABC-type maltose transport systems, permease component
AMOR_22410	COG2182	Extracellular solute-binding protein
AMOR_22420	COG3842	ATPase activity
AMOR_22430	COG0366	Alpha amylase catalytic
AMOR_22550	COG0438	transferase activity, transferring glycosyl groups
AMOR_22580	COG0248	Ppx GppA phosphatase
AMOR_22600	COG2259	Doxx family
AMOR_22640	COG1136	(ABC) transporter
AMOR_22660	COG0577	efflux transmembrane transporter activity
AMOR_22660	COG1136	(ABC) transporter
AMOR_22710	COG3259	Nickel-dependent hydrogenase
AMOR_22750	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMOR_22810	COG1560	Kdo2-lipid A biosynthetic process
AMOR_22820	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AMOR_22830	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AMOR_22840	COG0504	CTP synthase activity
AMOR_22850	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
AMOR_22880	COG0564	pseudouridine synthase activity
AMOR_22940	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMOR_22950	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AMOR_22960	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AMOR_22980	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMOR_22990	COG3339	Conserved Protein
AMOR_23090	COG1674	ftsk spoiiie
AMOR_23110	COG2270	Major facilitator Superfamily
AMOR_23170	COG0839	Belongs to the complex I subunit 6 family
AMOR_23250	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMOR_23340	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMOR_23380	COG5002	protein histidine kinase activity
AMOR_23400	COG5002	protein histidine kinase activity
AMOR_23420	COG1193	negative regulation of DNA recombination
AMOR_23430	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMOR_23450	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AMOR_23460	COG0830	nickel cation binding
AMOR_23470	COG0804	urea catabolic process
AMOR_23480	COG0832	Belongs to the urease beta subunit family
AMOR_23480	COG0831	urea catabolic process
AMOR_23490	COG0829	nickel cation binding
AMOR_23540	COG3852	Histidine kinase
AMOR_23560	COG0306	phosphate transporter
AMOR_23570	COG1506	peptidase
AMOR_23570	COG0823	Involved in the tonB-independent uptake of proteins
AMOR_23570	COG4946	Tricorn protease homolog
AMOR_23580	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AMOR_23630	COG0469	pyruvate kinase activity
AMOR_23650	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMOR_23690	COG2204	response regulator
AMOR_23750	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMOR_23790	COG2205	protein histidine kinase activity
AMOR_23800	COG3243	poly(R)-hydroxyalkanoic acid synthase
AMOR_23880	COG0174	glutamine synthetase
AMOR_23920	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_23950	COG0411	ABC transporter
AMOR_23970	COG0559	Belongs to the binding-protein-dependent transport system permease family
AMOR_23990	COG0745	RESPONSE REGULATOR receiver
AMOR_24020	COG1472	Belongs to the glycosyl hydrolase 3 family
AMOR_24050	COG0714	Associated with various cellular activities
AMOR_24150	COG0463	Glycosyl transferase, family 2
AMOR_24220	COG1596	polysaccharide export
AMOR_24240	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMOR_24250	COG1132	(ABC) transporter
AMOR_24270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMOR_24290	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_24320	COG0438	transferase activity, transferring glycosyl groups
AMOR_24350	COG1086	Polysaccharide biosynthesis protein
AMOR_24390	COG2244	polysaccharide biosynthetic process
AMOR_24410	COG2132	Multicopper oxidase
AMOR_24420	COG0489	protein tyrosine kinase activity
AMOR_24440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_24450	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
AMOR_24470	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMOR_24530	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMOR_24540	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
AMOR_24590	COG3852	Histidine kinase
AMOR_24600	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
AMOR_24610	COG1691	(AIR) carboxylase
AMOR_24630	COG2198	Histidine kinase
AMOR_24630	COG0643	Histidine kinase
AMOR_24640	COG2201	protein-glutamate methylesterase activity
AMOR_24650	COG0835	chemotaxis
AMOR_24660	COG0840	transmembrane signaling receptor activity
AMOR_24660	COG3290	protein histidine kinase activity
AMOR_24670	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AMOR_24680	COG2205	protein histidine kinase activity
AMOR_24680	COG2202	Pas domain
AMOR_24690	COG1100	Small GTP-binding protein
AMOR_24700	COG4191	Histidine kinase
AMOR_24710	COG1199	ATP-dependent helicase activity
AMOR_24750	COG0484	heat shock protein binding
AMOR_24760	COG0443	Heat shock 70 kDa protein
AMOR_24770	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMOR_24780	COG1420	regulation of RNA biosynthetic process
AMOR_24810	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMOR_24820	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMOR_24830	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMOR_24840	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AMOR_24850	COG2382	esterase
AMOR_24850	COG3507	Belongs to the glycosyl hydrolase 43 family
AMOR_24850	COG3693	PFAM glycoside hydrolase, family 10
AMOR_24860	COG0012	GTP binding
AMOR_24880	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMOR_24890	COG0356	it plays a direct role in the translocation of protons across the membrane
AMOR_24930	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AMOR_24970	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AMOR_24980	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMOR_24990	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMOR_25020	COG0071	Belongs to the small heat shock protein (HSP20) family
AMOR_25040	COG1475	DNA binding
AMOR_25090	COG0706	membrane insertase activity
AMOR_25100	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
AMOR_25110	COG0594	ribonuclease P activity
AMOR_25150	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMOR_25170	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMOR_25210	COG0247	lactate metabolic process
AMOR_25210	COG2181	nitrate reductase activity
AMOR_25240	COG0189	ligase activity
AMOR_25240	COG0569	domain protein
AMOR_25250	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMOR_25260	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMOR_25270	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMOR_25330	COG2989	Protein conserved in bacteria
AMOR_25340	COG1690	Belongs to the RtcB family
AMOR_25370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMOR_25400	COG2814	Major facilitator Superfamily
AMOR_25440	COG0840	transmembrane signaling receptor activity
AMOR_25450	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_25490	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AMOR_25520	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AMOR_25540	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
AMOR_25570	COG0280	phosphate acetyltransferase
AMOR_25580	COG3426	butyrate kinase activity
AMOR_25600	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AMOR_25650	COG2086	electron transfer activity
AMOR_25670	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMOR_25680	COG0861	Integral membrane protein TerC family
AMOR_25700	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AMOR_25720	COG2233	PERMEase
AMOR_25730	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AMOR_25730	COG1793	dna ligase
AMOR_25740	COG0564	pseudouridine synthase activity
AMOR_25750	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AMOR_25790	COG0805	protein transport
AMOR_25810	COG0183	Belongs to the thiolase family
AMOR_25850	COG1032	radical SAM domain protein
AMOR_25860	COG2205	protein histidine kinase activity
AMOR_25870	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
AMOR_25880	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AMOR_25900	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AMOR_25920	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMOR_25940	COG0352	thiamine-phosphate diphosphorylase activity
AMOR_25950	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
AMOR_25960	COG0351	phosphomethylpyrimidine kinase
AMOR_25960	COG0352	thiamine-phosphate diphosphorylase activity
AMOR_25960	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AMOR_25980	COG0305	Participates in initiation and elongation during chromosome replication
AMOR_26000	COG0612	Peptidase, M16
AMOR_26030	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AMOR_26040	COG1410	methionine synthase
AMOR_26040	COG0646	methionine synthase
AMOR_26080	COG0433	COG0433 Predicted ATPase
AMOR_26110	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMOR_26130	COG1666	GTP binding
AMOR_26140	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMOR_26170	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMOR_26170	COG0512	Glutamine amidotransferase of anthranilate synthase
AMOR_26210	COG2205	protein histidine kinase activity
AMOR_26220	COG2204	response regulator
AMOR_26230	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMOR_26240	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AMOR_26260	COG0612	Peptidase, M16
AMOR_26270	COG0612	Peptidase, M16
AMOR_26300	COG2204	response regulator
AMOR_26310	COG4191	Histidine kinase
AMOR_26360	COG1077	Cell shape determining protein MreB Mrl
AMOR_26370	COG1077	Cell shape determining protein MreB Mrl
AMOR_26380	COG0823	Involved in the tonB-independent uptake of proteins
AMOR_26380	COG1506	peptidase
AMOR_26410	COG0359	binds to the 23S rRNA
AMOR_26430	COG0360	Binds together with S18 to 16S ribosomal RNA
AMOR_26440	COG0193	aminoacyl-tRNA hydrolase activity
AMOR_26470	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMOR_26480	COG2088	sporulation resulting in formation of a cellular spore
AMOR_26490	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMOR_26570	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AMOR_26700	COG2022	thiamine diphosphate biosynthetic process
AMOR_26700	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AMOR_26720	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AMOR_26760	COG2204	response regulator
AMOR_26780	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AMOR_26800	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AMOR_26800	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AMOR_26810	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AMOR_26830	COG3716	PTS system mannose fructose sorbose family IID component
AMOR_26850	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMOR_26900	COG2226	methyltransferase
AMOR_26910	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
AMOR_26920	COG1968	undecaprenyl-diphosphatase activity
AMOR_26940	COG0662	Cupin 2, conserved barrel domain protein
AMOR_26940	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
AMOR_26960	COG1846	Transcriptional regulator
AMOR_26960	COG1940	carbohydrate kinase activity
AMOR_26990	COG0811	peptide transport
AMOR_27010	COG1293	RNA-binding protein homologous to eukaryotic snRNP
AMOR_27130	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
AMOR_27150	COG0626	cystathionine gamma-synthase activity
AMOR_27200	COG3138	arginine N-succinyltransferase
AMOR_27210	COG1490	D-aminoacyl-tRNA deacylase activity
AMOR_27220	COG0537	adenosine 5'-monophosphoramidase activity
AMOR_27280	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AMOR_27290	COG0287	Prephenate dehydrogenase
AMOR_27320	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
AMOR_27330	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AMOR_27340	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
AMOR_27350	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
AMOR_27360	COG1215	transferase activity, transferring glycosyl groups
AMOR_27410	COG0564	pseudouridine synthase activity
AMOR_27470	COG0109	protoheme IX farnesyltransferase activity
AMOR_27470	COG1612	heme a metabolic process
AMOR_27580	COG1131	(ABC) transporter
AMOR_27590	COG2814	Major facilitator Superfamily
AMOR_27670	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMOR_27680	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AMOR_27690	COG0799	negative regulation of ribosome biogenesis
AMOR_27720	COG0697	spore germination
AMOR_27730	COG0515	serine threonine protein kinase
AMOR_27740	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMOR_27740	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
AMOR_27740	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMOR_27740	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AMOR_27820	COG0612	Peptidase, M16
AMOR_27890	COG1404	Belongs to the peptidase S8 family
AMOR_27910	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMOR_27920	COG1040	competence protein
AMOR_28030	COG1297	OPT oligopeptide transporter protein
AMOR_28070	COG2264	protein methyltransferase activity
AMOR_28080	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AMOR_28110	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMOR_28160	COG0535	radical SAM domain protein
AMOR_28180	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMOR_28180	COG1213	nucleotidyl transferase
AMOR_28210	COG1032	radical SAM domain protein
AMOR_28240	COG0439	Biotin carboxylase
AMOR_28290	COG1278	Cold shock
AMOR_28330	COG0204	Acyl-transferase
AMOR_28350	COG5002	protein histidine kinase activity
AMOR_28360	COG4770	biotin carboxylase activity
AMOR_28370	COG0511	ligase activity, forming carbon-carbon bonds
AMOR_28380	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_28380	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_28390	COG0484	heat shock protein binding
AMOR_28550	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AMOR_28560	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AMOR_28570	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMOR_28570	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMOR_28580	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AMOR_28590	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMOR_28600	COG0617	tRNA 3'-terminal CCA addition
AMOR_28610	COG0528	UMP kinase activity
AMOR_28620	COG0233	cytoplasmic translational termination
AMOR_28650	COG2326	polyphosphate kinase activity
AMOR_28670	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AMOR_28670	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AMOR_28760	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMOR_28790	COG1640	4-alpha-glucanotransferase
AMOR_28800	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMOR_28860	COG3181	Tripartite tricarboxylate transporter family receptor
AMOR_28890	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMOR_28930	COG1396	sequence-specific DNA binding
AMOR_28970	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AMOR_28990	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AMOR_29000	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMOR_29020	COG0438	transferase activity, transferring glycosyl groups
AMOR_29030	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AMOR_29090	COG0438	transferase activity, transferring glycosyl groups
AMOR_29250	COG0700	Nucleoside recognition
AMOR_29260	COG2715	membrane protein required for spore maturation
AMOR_29280	COG0346	lactoylglutathione lyase activity
AMOR_29360	COG0179	Fumarylacetoacetate (FAA) hydrolase
AMOR_29370	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AMOR_29400	COG0235	Class ii aldolase
AMOR_29470	COG0519	Catalyzes the synthesis of GMP from XMP
AMOR_29470	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AMOR_29480	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
AMOR_29510	COG0159	tryptophan synthase activity
AMOR_29520	COG0133	tryptophan synthase activity
AMOR_29530	COG0135	phosphoribosylanthranilate isomerase activity
AMOR_29540	COG0134	indole-3-glycerol-phosphate synthase activity
AMOR_29550	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AMOR_29570	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
AMOR_29590	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMOR_29590	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMOR_29630	COG0482	sulfurtransferase activity
AMOR_29640	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMOR_29640	COG0574	Belongs to the PEP-utilizing enzyme family
AMOR_29670	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMOR_29690	COG2030	dehydratase
AMOR_29760	COG2967	ApaG domain
AMOR_29810	COG1408	metallophosphoesterase
AMOR_29840	COG2363	Small membrane protein
AMOR_29880	COG1201	RNA secondary structure unwinding
AMOR_29900	COG2814	Major facilitator Superfamily
AMOR_29950	COG0116	Belongs to the methyltransferase superfamily
AMOR_29950	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AMOR_29960	COG5001	Diguanylate cyclase
AMOR_29960	COG5002	protein histidine kinase activity
AMOR_29990	COG5002	protein histidine kinase activity
AMOR_30010	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AMOR_30020	COG0573	inorganic phosphate transmembrane transporter activity
AMOR_30030	COG0581	inorganic phosphate transmembrane transporter activity
AMOR_30040	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
AMOR_30050	COG0704	Plays a role in the regulation of phosphate uptake
AMOR_30100	COG3647	Membrane
AMOR_30120	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMOR_30160	COG0297	glycogen (starch) synthase activity
AMOR_30190	COG0488	(ABC) transporter
AMOR_30200	COG4191	Histidine kinase
AMOR_30210	COG0584	glycerophosphoryl diester phosphodiesterase
AMOR_30260	COG1999	signal sequence binding
AMOR_30350	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMOR_30360	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AMOR_30370	COG0745	RESPONSE REGULATOR receiver
AMOR_30400	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AMOR_30410	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AMOR_30430	COG0840	transmembrane signaling receptor activity
AMOR_30480	COG4846	Membrane protein involved in cytochrome C biogenesis
AMOR_30490	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMOR_30490	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMOR_30510	COG2379	hydroxypyruvate reductase
AMOR_30600	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
AMOR_30610	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMOR_30620	COG0405	Gamma-glutamyltransferase
AMOR_30670	COG0492	ferredoxin-NADP+ reductase activity
AMOR_30690	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMOR_30690	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMOR_30700	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
AMOR_30750	COG2239	Acts as a magnesium transporter
AMOR_30760	COG2840	Smr protein MutS2
AMOR_30790	COG0515	serine threonine protein kinase
AMOR_30790	COG2815	serine threonine protein kinase
AMOR_30810	COG1136	(ABC) transporter
AMOR_30830	COG0577	efflux transmembrane transporter activity
AMOR_30830	COG1136	(ABC) transporter
AMOR_30890	COG4932	domain protein
AMOR_30890	COG5492	domain, Protein
AMOR_30940	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AMOR_30970	COG0154	amidase activity
AMOR_30990	COG1252	NADH dehydrogenase
AMOR_31000	COG3875	lactate racemase activity
AMOR_31050	COG0375	protein maturation
AMOR_31070	COG0409	Hydrogenase expression formation protein
AMOR_31080	COG0298	carbon dioxide binding
AMOR_31090	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AMOR_31110	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AMOR_31120	COG5557	Pfam Polysulphide reductase, NrfD
AMOR_31130	COG0437	4 iron, 4 sulfur cluster binding
AMOR_31140	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AMOR_31160	COG0395	ABC-type sugar transport system, permease component
AMOR_31180	COG3842	ATPase activity
AMOR_31210	COG1322	Protein conserved in bacteria
AMOR_31240	COG1597	lipid kinase activity
AMOR_31250	COG1116	anion transmembrane transporter activity
AMOR_31260	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AMOR_31280	COG1285	pathogenesis
AMOR_31290	COG2119	membrane
AMOR_31360	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AMOR_31360	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AMOR_31370	COG5002	protein histidine kinase activity
AMOR_31390	COG0297	glycogen (starch) synthase activity
AMOR_31430	COG0745	RESPONSE REGULATOR receiver
AMOR_31440	COG2205	protein histidine kinase activity
AMOR_31450	COG0531	amino acid
AMOR_31480	COG5002	protein histidine kinase activity
AMOR_31490	COG2205	protein histidine kinase activity
AMOR_31500	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AMOR_31520	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
AMOR_31580	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
AMOR_31630	COG0071	Belongs to the small heat shock protein (HSP20) family
AMOR_31650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_31650	COG2205	protein histidine kinase activity
AMOR_31670	COG0477	Major facilitator Superfamily
AMOR_31680	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_31770	COG0745	RESPONSE REGULATOR receiver
AMOR_31840	COG0300	oxidoreductase activity
AMOR_31880	COG1595	DNA-templated transcription, initiation
AMOR_31900	COG2814	Major facilitator Superfamily
AMOR_31910	COG1566	PFAM secretion protein HlyD family protein
AMOR_31930	COG4191	Histidine kinase
AMOR_31990	COG4566	intracellular signal transduction
AMOR_32060	COG4968	Prepilin-type N-terminal cleavage methylation domain
AMOR_32110	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AMOR_32140	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMOR_32150	COG2204	response regulator
AMOR_32220	COG0612	Peptidase, M16
AMOR_32230	COG5002	protein histidine kinase activity
AMOR_32280	COG2201	protein-glutamate methylesterase activity
AMOR_32330	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
AMOR_32360	COG4232	protein-disulfide reductase activity
AMOR_32390	COG0316	Belongs to the HesB IscA family
AMOR_32400	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AMOR_32410	COG0443	Heat shock 70 kDa protein
AMOR_32420	COG0633	Ferredoxin
AMOR_32430	COG2975	iron-sulfur cluster assembly
AMOR_32440	COG0840	transmembrane signaling receptor activity
AMOR_32450	COG2201	protein-glutamate methylesterase activity
AMOR_32470	COG0835	chemotaxis
AMOR_32480	COG0643	Histidine kinase
AMOR_32480	COG2198	Histidine kinase
AMOR_32490	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
AMOR_32510	COG0745	RESPONSE REGULATOR receiver
AMOR_32540	COG0745	RESPONSE REGULATOR receiver
AMOR_32590	COG2201	protein-glutamate methylesterase activity
AMOR_32610	COG0784	Response regulator, receiver
AMOR_32620	COG0217	transcriptional regulatory protein
AMOR_32640	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AMOR_32660	COG0295	cytidine deaminase activity
AMOR_32680	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMOR_32700	COG1459	type II secretion system
AMOR_32710	COG4191	Histidine kinase
AMOR_32780	COG4106	trans-aconitate 2-methyltransferase activity
AMOR_32790	COG0463	Glycosyl transferase, family 2
AMOR_32800	COG4106	trans-aconitate 2-methyltransferase activity
AMOR_32840	COG4968	Prepilin-type N-terminal cleavage methylation domain
AMOR_32870	COG1131	(ABC) transporter
AMOR_32890	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AMOR_32900	COG4191	Histidine kinase
AMOR_33000	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMOR_33010	COG0511	ligase activity, forming carbon-carbon bonds
AMOR_33020	COG0439	Biotin carboxylase
AMOR_33040	COG3409	Peptidoglycan-binding domain 1 protein
AMOR_33040	COG3267	Type II secretory pathway component ExeA
AMOR_33070	COG0277	FAD linked oxidase domain protein
AMOR_33140	COG0811	peptide transport
AMOR_33160	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AMOR_33180	COG2884	Cell division ATP-binding protein ftsE
AMOR_33190	COG2177	Part of the ABC transporter FtsEX involved in
AMOR_33200	COG4942	peptidase
AMOR_33210	COG0793	Belongs to the peptidase S41A family
AMOR_33220	COG1215	transferase activity, transferring glycosyl groups
AMOR_33250	COG0552	protein localization to endoplasmic reticulum
AMOR_33260	COG1196	nuclear chromosome segregation
AMOR_33280	COG0596	Alpha beta hydrolase
AMOR_33360	COG2165	general secretion pathway protein
AMOR_33370	COG1459	type II secretion system
AMOR_33380	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMOR_33390	COG1450	Type ii and iii secretion system protein
AMOR_33430	COG0254	rRNA binding
AMOR_33440	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AMOR_33480	COG1254	Belongs to the acylphosphatase family
AMOR_33500	COG1530	ribonuclease E activity
AMOR_33500	COG1530	ribonuclease E activity
AMOR_33510	COG1295	ribonuclease BN
AMOR_33520	COG0776	regulation of translation
AMOR_33530	COG4789	Type iii secretion
AMOR_33540	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AMOR_33560	COG4794	Type iii secretion
AMOR_33570	COG4790	Type iii secretion
AMOR_33590	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AMOR_33650	COG2124	cytochrome p450
AMOR_33680	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
AMOR_33700	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AMOR_33710	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AMOR_33720	COG0107	imidazoleglycerol-phosphate synthase activity
AMOR_33750	COG1610	YqeY-like protein
AMOR_33810	COG1584	GPR1 FUN34 yaaH family protein
AMOR_33820	COG0242	peptide deformylase activity
AMOR_33850	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMOR_33900	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AMOR_33910	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMOR_33920	COG0497	DNA recombination
AMOR_33930	COG0631	protein serine/threonine phosphatase activity
AMOR_33940	COG0739	heme binding
AMOR_33950	COG2843	Capsule synthesis protein
AMOR_33970	COG0653	protein targeting
AMOR_34040	COG0628	permease
AMOR_34060	COG1215	transferase activity, transferring glycosyl groups
AMOR_34070	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
AMOR_34100	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AMOR_34120	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AMOR_34170	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMOR_34180	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMOR_34210	COG0596	Alpha beta hydrolase
AMOR_34230	COG0348	domain, Protein
AMOR_34240	COG0589	response to stress
AMOR_34290	COG1592	Rubrerythrin
AMOR_34330	COG0667	Aldo Keto reductase
AMOR_34350	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AMOR_34400	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMOR_34430	COG0745	RESPONSE REGULATOR receiver
AMOR_34440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AMOR_34450	COG0671	phosphoesterase, PA-phosphatase related
AMOR_34460	COG1253	flavin adenine dinucleotide binding
AMOR_34490	COG2890	protein-(glutamine-N5) methyltransferase activity
AMOR_34510	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMOR_34560	COG1643	Atp-dependent helicase
AMOR_34570	COG0071	Belongs to the small heat shock protein (HSP20) family
AMOR_34600	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AMOR_34630	COG1063	alcohol dehydrogenase
AMOR_34660	COG0437	4 iron, 4 sulfur cluster binding
AMOR_34780	COG0028	Belongs to the TPP enzyme family
AMOR_34800	COG0277	FAD linked oxidase domain protein
AMOR_34800	COG0247	lactate metabolic process
AMOR_34810	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
AMOR_34830	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AMOR_34860	COG1793	dna ligase
AMOR_34870	COG0069	glutamate synthase activity
AMOR_34870	COG0070	glutamate synthase
AMOR_34870	COG0067	glutamate synthase
AMOR_34880	COG0493	'glutamate synthase
AMOR_34900	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMOR_34920	COG0437	4 iron, 4 sulfur cluster binding
AMOR_34950	COG3973	AAA domain
AMOR_34960	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AMOR_34970	COG0488	(ABC) transporter
AMOR_35000	COG2205	protein histidine kinase activity
AMOR_35030	COG1012	belongs to the aldehyde dehydrogenase family
AMOR_35070	COG3852	Histidine kinase
AMOR_35090	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_35100	COG1131	(ABC) transporter
AMOR_35110	COG1131	(ABC) transporter
AMOR_35120	COG1129	ABC transporter
AMOR_35120	COG0842	Transport permease protein
AMOR_35130	COG0842	Transport permease protein
AMOR_35150	COG1131	(ABC) transporter
AMOR_35160	COG0842	Transport permease protein
AMOR_35180	COG0514	ATP-dependent DNA helicase (RecQ)
AMOR_35210	COG4681	YaeQ
AMOR_35230	COG0719	Fe-S assembly protein
AMOR_35240	COG0396	ATPase activity
AMOR_35250	COG0719	Fe-S assembly protein
AMOR_35260	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMOR_35300	COG0667	Aldo Keto reductase
AMOR_35340	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMOR_35360	COG1136	(ABC) transporter
AMOR_35360	COG0577	efflux transmembrane transporter activity
AMOR_35370	COG2197	response regulator
AMOR_35400	COG1760	l-serine dehydratase
AMOR_35450	COG0058	SHG alpha-glucan phosphorylase activity
AMOR_35460	COG3695	enzyme binding
AMOR_35530	COG3263	regulation of cellular component size
AMOR_35550	COG1396	sequence-specific DNA binding
AMOR_35560	COG0745	RESPONSE REGULATOR receiver
AMOR_35570	COG0004	ammonium transporteR
AMOR_35590	COG5002	protein histidine kinase activity
AMOR_35600	COG0004	ammonium transporteR
AMOR_35610	COG0531	amino acid
AMOR_35620	COG0004	ammonium transporteR
AMOR_35630	COG2815	serine threonine protein kinase
AMOR_35630	COG0515	serine threonine protein kinase
AMOR_35650	COG3174	membrane
AMOR_35800	COG0714	Associated with various cellular activities
AMOR_35870	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
AMOR_35910	COG0668	transmembrane transport
AMOR_35940	COG2322	membrane
AMOR_35960	COG1131	(ABC) transporter
AMOR_35970	COG0109	protoheme IX farnesyltransferase activity
AMOR_35990	COG0037	tRNA processing
AMOR_36010	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMOR_36020	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AMOR_36030	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AMOR_36110	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AMOR_36120	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMOR_36170	COG1215	transferase activity, transferring glycosyl groups
AMOR_36240	COG1045	serine acetyltransferase
AMOR_36250	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_36260	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AMOR_36270	COG0367	asparagine synthase
AMOR_36420	COG4191	Histidine kinase
AMOR_36440	COG0438	transferase activity, transferring glycosyl groups
AMOR_36450	COG0840	transmembrane signaling receptor activity
AMOR_36470	COG2873	o-acetylhomoserine
AMOR_36520	COG0515	serine threonine protein kinase
AMOR_36520	COG2815	serine threonine protein kinase
AMOR_36580	COG0432	Pfam Uncharacterised protein family UPF0047
AMOR_36620	COG1192	Involved in chromosome partitioning
AMOR_36630	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
AMOR_36680	COG0584	glycerophosphoryl diester phosphodiesterase
AMOR_36710	COG1271	oxidase subunit
AMOR_36720	COG1294	oxidase, subunit
AMOR_36750	COG2205	protein histidine kinase activity
AMOR_36760	COG2204	response regulator
AMOR_36810	COG1331	Highly conserved protein containing a thioredoxin domain
AMOR_36860	COG3158	transport of potassium into the cell
AMOR_36870	COG2814	Major facilitator Superfamily
AMOR_36880	COG2814	Major facilitator Superfamily
AMOR_36890	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
AMOR_36950	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
AMOR_37070	COG0427	acetyl-CoA hydrolase
AMOR_37090	COG0745	RESPONSE REGULATOR receiver
AMOR_37160	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_37160	COG2205	protein histidine kinase activity
AMOR_37170	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
AMOR_37180	COG1560	Kdo2-lipid A biosynthetic process
AMOR_37230	COG3239	Fatty acid desaturase
AMOR_37240	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AMOR_37240	COG3264	Mechanosensitive ion channel
AMOR_37250	COG0387	Pfam Sodium calcium exchanger
AMOR_37270	COG0628	permease
AMOR_37320	COG2815	serine threonine protein kinase
AMOR_37320	COG0515	serine threonine protein kinase
AMOR_37370	COG0633	Ferredoxin
AMOR_37370	COG0543	2 iron, 2 sulfur cluster binding
AMOR_37380	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMOR_37450	COG1127	ABC transporter
AMOR_37460	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AMOR_37500	COG0662	Cupin 2, conserved barrel domain protein
AMOR_37540	COG2204	response regulator
AMOR_37660	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMOR_37660	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMOR_37680	COG1032	radical SAM domain protein
AMOR_37750	COG2201	protein-glutamate methylesterase activity
AMOR_37810	COG2860	membrane
AMOR_37820	COG1473	amidohydrolase
AMOR_37950	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMOR_37970	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMOR_38000	COG1335	isochorismatase
AMOR_38020	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AMOR_38030	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AMOR_38050	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AMOR_38070	COG1692	metallophosphoesterase
AMOR_38090	COG0515	serine threonine protein kinase
AMOR_38120	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AMOR_38170	COG0531	amino acid
AMOR_38180	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AMOR_38200	COG2204	response regulator
AMOR_38330	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMOR_38500	COG0625	glutathione transferase activity
AMOR_38520	COG0545	Peptidyl-prolyl cis-trans isomerase
AMOR_38530	COG0628	permease
AMOR_38540	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMOR_38550	COG1619	proteins homologs of microcin C7 resistance protein MccF
AMOR_38570	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AMOR_38600	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMOR_38640	COG1196	nuclear chromosome segregation
AMOR_38640	COG0741	lytic transglycosylase activity
AMOR_38640	COG0739	heme binding
AMOR_38660	COG1119	ATPase activity
AMOR_38670	COG0406	alpha-ribazole phosphatase activity
AMOR_38680	COG3852	Histidine kinase
AMOR_38700	COG0625	glutathione transferase activity
AMOR_38710	COG0564	pseudouridine synthase activity
AMOR_38770	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMOR_38860	COG0709	Synthesizes selenophosphate from selenide and ATP
AMOR_38870	COG0860	N-Acetylmuramoyl-L-alanine amidase
AMOR_38890	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMOR_38910	COG0544	peptidyl-prolyl cis-trans isomerase activity
AMOR_38970	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMOR_38980	COG2136	Putative SAM-dependent methyltransferase
AMOR_38980	COG2521	methyltransferase
AMOR_39000	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AMOR_39010	COG2252	PERMEase
AMOR_39030	COG0436	Aminotransferase
AMOR_39050	COG5000	phosphorelay sensor kinase activity
AMOR_39090	COG2204	response regulator
AMOR_39100	COG2885	chlorophyll binding
AMOR_39170	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AMOR_39360	COG0745	RESPONSE REGULATOR receiver
AMOR_39590	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMOR_39620	COG1346	cytolysis
AMOR_39630	COG1380	Effector of murein hydrolase LrgA
AMOR_39640	COG0583	DNA-binding transcription factor activity
AMOR_39650	COG1063	alcohol dehydrogenase
AMOR_39690	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AMOR_39740	COG2201	protein-glutamate methylesterase activity
AMOR_39750	COG0604	alcohol dehydrogenase
AMOR_39780	COG0006	proline dipeptidase activity
AMOR_39940	COG1204	response to ionizing radiation
AMOR_39980	COG1218	3'(2'),5'-bisphosphate nucleotidase
AMOR_40020	COG2267	carboxylic ester hydrolase activity
AMOR_40030	COG2259	Doxx family
AMOR_40060	COG2259	Doxx family
AMOR_40080	COG2267	carboxylic ester hydrolase activity
AMOR_40100	COG0604	alcohol dehydrogenase
AMOR_40110	COG2130	NADP-dependent
AMOR_40120	COG3604	Transcriptional regulator
AMOR_40160	COG0154	amidase activity
AMOR_40170	COG4941	Belongs to the sigma-70 factor family
AMOR_40220	COG4941	Belongs to the sigma-70 factor family
AMOR_40260	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMOR_40270	COG1024	Enoyl-CoA hydratase
AMOR_40330	COG1136	(ABC) transporter
AMOR_40390	COG1132	(ABC) transporter
AMOR_40460	COG0596	Alpha beta hydrolase
AMOR_40480	COG0596	Alpha beta hydrolase
AMOR_40490	COG3604	Transcriptional regulator
AMOR_40500	COG4221	oxidoreductase activity
AMOR_40520	COG0667	Aldo Keto reductase
AMOR_40530	COG1064	alcohol dehydrogenase
AMOR_40550	COG0596	Alpha beta hydrolase
AMOR_40580	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_40630	COG4941	Belongs to the sigma-70 factor family
AMOR_40640	COG3795	YCII-related domain
AMOR_40700	COG2204	response regulator
AMOR_40710	COG3852	Histidine kinase
AMOR_40760	COG0745	RESPONSE REGULATOR receiver
AMOR_40800	COG0783	Belongs to the Dps family
AMOR_40810	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_40820	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AMOR_40830	COG0302	gtp cyclohydrolase
AMOR_40850	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMOR_40870	COG0667	Aldo Keto reductase
AMOR_40950	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AMOR_41040	COG3459	Glycosyltransferase 36 associated
AMOR_41100	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
AMOR_41130	COG1720	tRNA m6t6A37 methyltransferase activity
AMOR_41140	COG0076	glutamate decarboxylase activity
AMOR_41230	COG1136	(ABC) transporter
AMOR_41230	COG0577	efflux transmembrane transporter activity
AMOR_41260	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_41290	COG5002	protein histidine kinase activity
AMOR_41310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
AMOR_41330	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMOR_41370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_41470	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMOR_41480	COG0745	RESPONSE REGULATOR receiver
AMOR_41490	COG0475	glutathione-regulated potassium exporter activity
AMOR_41540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_41540	COG2205	protein histidine kinase activity
AMOR_41550	COG4191	Histidine kinase
AMOR_41560	COG2204	response regulator
AMOR_41590	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_41600	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMOR_41610	COG2226	methyltransferase
AMOR_41640	COG0515	serine threonine protein kinase
AMOR_41650	COG1132	(ABC) transporter
AMOR_41690	COG1741	Belongs to the pirin family
AMOR_41700	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
AMOR_41740	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
AMOR_41760	COG0583	DNA-binding transcription factor activity
AMOR_41770	COG0753	catalase activity
AMOR_41830	COG0431	NADPH-dependent FMN reductase
AMOR_41840	COG0436	Aminotransferase
AMOR_41850	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AMOR_41870	COG2815	serine threonine protein kinase
AMOR_41870	COG0515	serine threonine protein kinase
AMOR_41890	COG1132	(ABC) transporter
AMOR_42070	COG2205	protein histidine kinase activity
AMOR_42100	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_42110	COG0784	Response regulator, receiver
AMOR_42110	COG2205	protein histidine kinase activity
AMOR_42140	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_42150	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AMOR_42210	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMOR_42230	COG0589	response to stress
AMOR_42420	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AMOR_42800	COG0166	Belongs to the GPI family
AMOR_42820	COG0517	IMP dehydrogenase activity
AMOR_42820	COG1125	glycine betaine transport
AMOR_42830	COG1174	glycine betaine transport
AMOR_42910	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMOR_42980	COG1505	serine-type exopeptidase activity
AMOR_42990	COG0693	protein deglycase activity
AMOR_43000	COG0667	Aldo Keto reductase
AMOR_43040	COG0667	Aldo Keto reductase
AMOR_43050	COG2249	NAD(P)H dehydrogenase (quinone) activity
AMOR_43100	COG0443	Heat shock 70 kDa protein
AMOR_43110	COG0443	Heat shock 70 kDa protein
AMOR_43160	COG1295	ribonuclease BN
AMOR_43190	COG0686	Belongs to the AlaDH PNT family
AMOR_43220	COG0702	epimerase
AMOR_43250	COG1012	belongs to the aldehyde dehydrogenase family
AMOR_43280	COG1960	acyl-CoA dehydrogenase activity
AMOR_43340	COG0277	FAD linked oxidase domain protein
AMOR_43380	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
AMOR_43410	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMOR_43410	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AMOR_43420	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMOR_43440	COG0583	DNA-binding transcription factor activity
AMOR_43470	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_43500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_43510	COG1309	transcriptional regulator
AMOR_43570	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
AMOR_43590	COG0366	Alpha amylase catalytic
AMOR_43610	COG5002	protein histidine kinase activity
AMOR_43670	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AMOR_43680	COG3800	Transcriptional regulator
AMOR_43680	COG1396	sequence-specific DNA binding
AMOR_43710	COG1970	mechanosensitive ion channel activity
AMOR_43750	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
AMOR_43800	COG0745	RESPONSE REGULATOR receiver
AMOR_43830	COG2860	membrane
AMOR_43850	COG3268	Saccharopine dehydrogenase
AMOR_43890	COG3718	enzyme involved in inositol metabolism
AMOR_43910	COG3962	Belongs to the TPP enzyme family
AMOR_43920	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMOR_43930	COG1082	Xylose isomerase domain protein TIM barrel
AMOR_43950	COG0673	inositol 2-dehydrogenase activity
AMOR_43970	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMOR_43990	COG0673	inositol 2-dehydrogenase activity
AMOR_44000	COG0673	inositol 2-dehydrogenase activity
AMOR_44020	COG1879	ABC-type sugar transport system periplasmic component
AMOR_44030	COG1129	ABC transporter
AMOR_44040	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMOR_44050	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AMOR_44070	COG0501	Belongs to the peptidase M48B family
AMOR_44090	COG2264	protein methyltransferase activity
AMOR_44130	COG4106	trans-aconitate 2-methyltransferase activity
AMOR_44150	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AMOR_44240	COG1131	(ABC) transporter
AMOR_44250	COG0508	dehydrogenase complex catalyzes the overall conversion of
AMOR_44270	COG1129	ABC transporter
AMOR_44280	COG1172	Belongs to the binding-protein-dependent transport system permease family
AMOR_44290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMOR_44400	COG5002	protein histidine kinase activity
AMOR_44420	COG0840	transmembrane signaling receptor activity
AMOR_44450	COG0076	glutamate decarboxylase activity
AMOR_44580	COG2205	protein histidine kinase activity
AMOR_44600	COG1653	transport
AMOR_44630	COG3842	ATPase activity
AMOR_44720	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AMOR_44770	COG0513	Belongs to the DEAD box helicase family
AMOR_44780	COG2205	protein histidine kinase activity
AMOR_44790	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AMOR_44800	COG4771	TonB-dependent receptor
AMOR_44820	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMOR_44840	COG2205	protein histidine kinase activity
AMOR_44850	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AMOR_44960	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
AMOR_45000	COG3622	Belongs to the hyi family
AMOR_45010	COG2084	Dehydrogenase
AMOR_45050	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_45110	COG1272	protein, Hemolysin III
AMOR_45150	COG0823	Involved in the tonB-independent uptake of proteins
AMOR_45160	COG2234	aminopeptidase activity
AMOR_45170	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AMOR_45190	COG3875	lactate racemase activity
AMOR_45220	COG0438	transferase activity, transferring glycosyl groups
AMOR_45240	COG3206	protein involved in exopolysaccharide biosynthesis
AMOR_45240	COG0489	protein tyrosine kinase activity
AMOR_45270	COG0004	ammonium transporteR
AMOR_45280	COG0347	Belongs to the P(II) protein family
AMOR_45300	COG2205	protein histidine kinase activity
AMOR_45350	COG0437	4 iron, 4 sulfur cluster binding
AMOR_45420	COG1609	Transcriptional regulator
AMOR_45440	COG1649	PFAM Uncharacterised BCR, COG1649
AMOR_45440	COG0726	polysaccharide deacetylase
AMOR_45450	COG1215	transferase activity, transferring glycosyl groups
AMOR_45470	COG3284	Transcriptional regulator
AMOR_45500	COG0314	molybdopterin synthase activity
AMOR_45520	COG0315	cyclic pyranopterin monophosphate synthase activity
AMOR_45560	COG2414	aldehyde ferredoxin oxidoreductase
AMOR_45570	COG0303	'Molybdopterin
AMOR_45590	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMOR_45600	COG3284	Transcriptional regulator
AMOR_45650	COG0446	pyridine nucleotide-disulphide oxidoreductase
AMOR_45650	COG1902	pentaerythritol trinitrate reductase activity
AMOR_45660	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AMOR_45670	COG0644	oxidoreductase
AMOR_45700	COG1215	transferase activity, transferring glycosyl groups
AMOR_45710	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMOR_45720	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMOR_45740	COG1454	alcohol dehydrogenase
AMOR_45760	COG1309	transcriptional regulator
AMOR_45770	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_45870	COG0667	Aldo Keto reductase
AMOR_45910	COG2204	response regulator
AMOR_45980	COG4566	intracellular signal transduction
AMOR_46070	COG4191	Histidine kinase
AMOR_46080	COG4566	intracellular signal transduction
AMOR_46170	COG3040	lipid binding
AMOR_46190	COG0667	Aldo Keto reductase
AMOR_46290	COG3118	belongs to the thioredoxin family
AMOR_46340	COG2226	methyltransferase
AMOR_46350	COG1022	Amp-dependent synthetase and ligase
AMOR_46360	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AMOR_46430	COG2072	flavoprotein involved in K transport
AMOR_46440	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMOR_46440	COG0574	Belongs to the PEP-utilizing enzyme family
AMOR_46460	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AMOR_46460	COG1017	nitric oxide dioxygenase activity
AMOR_46480	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMOR_46490	COG2223	nitrite transmembrane transporter activity
AMOR_46590	COG0823	Involved in the tonB-independent uptake of proteins
AMOR_46680	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMOR_46710	COG0406	alpha-ribazole phosphatase activity
AMOR_46720	COG3119	arylsulfatase activity
AMOR_46880	COG0596	Alpha beta hydrolase
AMOR_46920	COG0596	Alpha beta hydrolase
AMOR_47060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMOR_47140	COG2226	methyltransferase
AMOR_47290	COG0395	ABC-type sugar transport system, permease component
AMOR_47320	COG4191	Histidine kinase
AMOR_47320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_47440	COG1322	Protein conserved in bacteria
AMOR_47470	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AMOR_47470	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
AMOR_47480	COG0484	heat shock protein binding
AMOR_47500	COG2205	protein histidine kinase activity
AMOR_47520	COG0583	DNA-binding transcription factor activity
AMOR_47530	COG1032	radical SAM domain protein
AMOR_47550	COG0277	FAD linked oxidase domain protein
AMOR_47570	COG0247	lactate metabolic process
AMOR_47620	COG1960	acyl-CoA dehydrogenase activity
AMOR_47640	COG3259	Nickel-dependent hydrogenase
AMOR_47650	COG1941	NADH ubiquinone oxidoreductase 20 kDa subunit
AMOR_47660	COG3383	formate dehydrogenase (NAD+) activity
AMOR_47730	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMOR_47760	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AMOR_47810	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AMOR_47840	COG0604	alcohol dehydrogenase
AMOR_47980	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
AMOR_47990	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
AMOR_48000	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
AMOR_48020	COG4231	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
AMOR_48130	COG0463	Glycosyl transferase, family 2
AMOR_48150	COG1132	(ABC) transporter
AMOR_48160	COG1216	Glycosyl transferase, family 2
AMOR_48200	COG1215	transferase activity, transferring glycosyl groups
AMOR_48230	COG0745	RESPONSE REGULATOR receiver
AMOR_48250	COG0488	(ABC) transporter
AMOR_48260	COG3186	Phenylalanine-4-hydroxylase
AMOR_48300	COG0745	RESPONSE REGULATOR receiver
AMOR_48320	COG0705	Rhomboid family
AMOR_48320	COG0457	Tetratricopeptide repeat
AMOR_48340	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AMOR_48340	COG0493	'glutamate synthase
AMOR_48390	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMOR_48450	COG0297	glycogen (starch) synthase activity
AMOR_48470	COG0673	inositol 2-dehydrogenase activity
AMOR_48520	COG2827	Endonuclease containing a URI domain
AMOR_48550	COG1592	Rubrerythrin
AMOR_48570	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMOR_48640	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AMOR_48670	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AMOR_48690	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMOR_48700	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AMOR_48720	COG0698	ribose 5-phosphate isomerase
AMOR_48730	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMOR_48740	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMOR_48750	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMOR_48750	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMOR_48770	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMOR_48770	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AMOR_48780	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AMOR_48810	COG0643	Histidine kinase
AMOR_48810	COG2198	Histidine kinase
AMOR_48820	COG3409	Peptidoglycan-binding domain 1 protein
AMOR_48820	COG3267	Type II secretory pathway component ExeA
AMOR_48840	COG0835	chemotaxis
AMOR_48860	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AMOR_48870	COG2201	protein-glutamate methylesterase activity
AMOR_48890	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMOR_48890	COG0392	lysyltransferase activity
AMOR_48920	COG0017	Asparaginyl-tRNA synthetase
AMOR_48960	COG0495	leucyl-tRNA aminoacylation
AMOR_48980	COG0268	Binds directly to 16S ribosomal RNA
AMOR_48990	COG3956	TIGRFAM MazG family protein
AMOR_49010	COG0457	Tetratricopeptide repeat
AMOR_49020	COG1702	phosphate starvation-inducible protein PhoH
AMOR_49030	COG1480	7TM receptor with intracellular HD hydrolase
AMOR_49050	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AMOR_49060	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMOR_49120	COG0438	transferase activity, transferring glycosyl groups
AMOR_49150	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AMOR_49170	COG1196	nuclear chromosome segregation
AMOR_49170	COG0745	RESPONSE REGULATOR receiver
AMOR_49220	COG1652	LysM domain
AMOR_49240	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMOR_49290	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
AMOR_49330	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AMOR_49340	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AMOR_49360	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMOR_49380	COG0443	Heat shock 70 kDa protein
AMOR_49440	COG0237	dephospho-CoA kinase activity
AMOR_49460	COG0737	Belongs to the 5'-nucleotidase family
AMOR_49520	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AMOR_49530	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AMOR_49590	COG0022	dehydrogenase e1 component
AMOR_49600	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AMOR_49690	COG4974	Belongs to the 'phage' integrase family
AMOR_49730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_49740	COG0492	ferredoxin-NADP+ reductase activity
AMOR_49960	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AMOR_49990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AMOR_50030	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMOR_50030	COG0425	Belongs to the sulfur carrier protein TusA family
AMOR_50050	COG2204	response regulator
AMOR_50100	COG0489	protein tyrosine kinase activity
AMOR_50120	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMOR_50130	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AMOR_50200	COG0438	transferase activity, transferring glycosyl groups
AMOR_50230	COG1053	succinate dehydrogenase
AMOR_50260	COG2204	response regulator
AMOR_50280	COG0243	molybdopterin cofactor binding
AMOR_50290	COG0437	4 iron, 4 sulfur cluster binding
AMOR_50360	COG0437	4 iron, 4 sulfur cluster binding
AMOR_50390	COG3301	Polysulphide reductase, NrfD
AMOR_50420	COG1216	Glycosyl transferase, family 2
AMOR_50430	COG2095	MarC family integral membrane protein
AMOR_50440	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AMOR_50450	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AMOR_50460	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMOR_50470	COG1132	(ABC) transporter
AMOR_50490	COG1519	Transferase
AMOR_50500	COG0859	PFAM glycosyl transferase family 9
AMOR_50510	COG1663	tetraacyldisaccharide 4'-kinase activity
AMOR_50530	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AMOR_50530	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AMOR_50540	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AMOR_50540	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AMOR_50550	COG2835	tetraacyldisaccharide 4'-kinase activity
AMOR_50560	COG1561	YicC-like family, N-terminal region
AMOR_50570	COG0194	GDP metabolic process
AMOR_50580	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AMOR_50810	COG2205	protein histidine kinase activity
AMOR_50820	COG2201	protein-glutamate methylesterase activity
AMOR_50830	COG0784	Response regulator, receiver
AMOR_50830	COG2198	Histidine kinase
AMOR_50830	COG0784	Response regulator, receiver
AMOR_50830	COG0643	Histidine kinase
AMOR_50830	COG2198	Histidine kinase
AMOR_50830	COG0643	Histidine kinase
AMOR_50890	COG1269	ATP hydrolysis coupled proton transport
AMOR_50960	COG1394	ATPase activity, coupled to movement of substances
AMOR_50980	COG5002	protein histidine kinase activity
AMOR_50990	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AMOR_51000	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMOR_51040	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AMOR_51060	COG2912	Transglutaminase-like superfamily
AMOR_51070	COG3411	Ferredoxin
AMOR_51080	COG1028	Short-chain dehydrogenase reductase Sdr
AMOR_51110	COG1047	Peptidyl-prolyl cis-trans
AMOR_51210	COG2719	SpoVR family
AMOR_51220	COG2718	Belongs to the UPF0229 family
AMOR_51230	COG2766	serine protein kinase
AMOR_51240	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AMOR_51250	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMOR_51280	COG1278	Cold shock
AMOR_51290	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMOR_51320	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AMOR_51370	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMOR_51380	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AMOR_51420	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMOR_51450	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AMOR_51470	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
AMOR_51500	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AMOR_51610	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AMOR_51640	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AMOR_51650	COG1309	transcriptional regulator
AMOR_51660	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AMOR_51690	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMOR_51750	COG1329	Transcriptional regulator
AMOR_51760	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AMOR_51760	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
AMOR_51800	COG1278	Cold shock
AMOR_51820	COG0556	nucleotide-excision repair
AMOR_51830	COG0322	excinuclease ABC activity
AMOR_51850	COG1045	serine acetyltransferase
AMOR_51890	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AMOR_51910	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMOR_51950	COG0483	inositol monophosphate 1-phosphatase activity
AMOR_52010	COG0456	acetyltransferase
AMOR_52020	COG0167	dihydroorotate dehydrogenase activity
AMOR_52050	COG0741	lytic transglycosylase activity
AMOR_52060	COG0602	queuosine metabolic process
AMOR_52110	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AMOR_52140	COG0752	glycyl-tRNA synthetase alpha subunit
AMOR_52150	COG0751	glycine-tRNA ligase activity
AMOR_52200	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMOR_52200	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMOR_52220	COG5002	protein histidine kinase activity
AMOR_52230	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMOR_52250	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMOR_52250	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMOR_52260	COG0084	hydrolase, TatD family'
AMOR_52280	COG3481	metal-dependent phosphohydrolase, HD sub domain
AMOR_52290	COG1335	isochorismatase
AMOR_52370	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMOR_52390	COG1506	peptidase
AMOR_52390	COG0823	Involved in the tonB-independent uptake of proteins
AMOR_52410	COG5002	protein histidine kinase activity
AMOR_52420	COG4566	intracellular signal transduction
AMOR_52420	COG0745	RESPONSE REGULATOR receiver
AMOR_52430	COG2205	protein histidine kinase activity
AMOR_52440	COG2239	Acts as a magnesium transporter
AMOR_52470	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AMOR_52490	COG0303	'Molybdopterin
AMOR_52500	COG1763	Mo-molybdopterin cofactor biosynthetic process
AMOR_52540	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
AMOR_52550	COG1360	Flagellar Motor Protein
AMOR_52560	COG3604	Transcriptional regulator
AMOR_52610	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMOR_52620	COG1262	PFAM Formylglycine-generating sulfatase enzyme
AMOR_52630	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
AMOR_52640	COG4191	Histidine kinase
AMOR_52680	COG0038	chloride channel
AMOR_52710	COG1233	COG1233 Phytoene dehydrogenase and related
AMOR_52730	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMOR_52750	COG0437	4 iron, 4 sulfur cluster binding
AMOR_52790	COG0429	hydrolase of the alpha beta-hydrolase fold
AMOR_52800	COG0343	queuine tRNA-ribosyltransferase activity
AMOR_52870	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMOR_52890	COG0698	ribose 5-phosphate isomerase
AMOR_52900	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
AMOR_52910	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMOR_52920	COG0475	glutathione-regulated potassium exporter activity
AMOR_52980	COG2205	protein histidine kinase activity
AMOR_52990	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
AMOR_53030	COG1605	Chorismate mutase
AMOR_53030	COG0077	Prephenate dehydratase
AMOR_53110	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMOR_53120	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AMOR_53150	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AMOR_53170	COG0438	transferase activity, transferring glycosyl groups
AMOR_53210	COG0297	glycogen (starch) synthase activity
AMOR_53210	COG0438	transferase activity, transferring glycosyl groups
AMOR_53240	COG0617	tRNA 3'-terminal CCA addition
AMOR_53250	COG2205	protein histidine kinase activity
AMOR_53260	COG0482	sulfurtransferase activity
AMOR_53270	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AMOR_53280	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMOR_53300	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_53310	COG1607	acyl-coa hydrolase
AMOR_53320	COG3246	L-lysine catabolic process to acetate
AMOR_53330	COG0776	regulation of translation
AMOR_53360	COG0004	ammonium transporteR
AMOR_53370	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
AMOR_53410	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMOR_53420	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AMOR_53430	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AMOR_53450	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMOR_53460	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AMOR_53480	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AMOR_53480	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMOR_53490	COG0802	atpase or kinase
AMOR_53530	COG0121	glutamine amidotransferase
AMOR_53570	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AMOR_53610	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMOR_53620	COG0825	malonyl-CoA metabolic process
AMOR_53630	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AMOR_53640	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
AMOR_53670	COG0539	negative regulation of cytoplasmic translation
AMOR_53670	COG2183	response to ionizing radiation
AMOR_53680	COG0616	signal peptide processing
AMOR_53750	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
AMOR_53770	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AMOR_53780	COG0126	phosphoglycerate kinase activity
AMOR_53790	COG0149	triose-phosphate isomerase activity
AMOR_53860	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AMOR_53870	COG0529	Catalyzes the synthesis of activated sulfate
AMOR_53870	COG2046	Belongs to the sulfate adenylyltransferase family
AMOR_53910	COG0101	tRNA pseudouridine synthase activity
AMOR_53960	COG0443	Heat shock 70 kDa protein
AMOR_53970	COG2766	serine protein kinase
AMOR_54010	COG4191	Histidine kinase
AMOR_54020	COG2204	response regulator
AMOR_54150	COG1730	sister chromatid segregation
AMOR_54200	COG1309	transcriptional regulator
AMOR_54250	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
AMOR_54260	COG2921	Belongs to the UPF0250 family
AMOR_54280	COG0443	Heat shock 70 kDa protein
AMOR_54290	COG0189	ligase activity
AMOR_54310	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMOR_54320	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMOR_54360	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMOR_54370	COG0081	regulation of translation
AMOR_54380	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMOR_54390	COG0222	ribosome binding
AMOR_54400	COG0085	RNA polymerase activity
AMOR_54460	COG0745	RESPONSE REGULATOR receiver
AMOR_54500	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AMOR_54550	COG2205	protein histidine kinase activity
AMOR_54560	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
AMOR_54630	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMOR_54670	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMOR_54680	COG0540	Belongs to the ATCase OTCase family
AMOR_54700	COG0505	Belongs to the CarA family
AMOR_54730	COG5002	protein histidine kinase activity
AMOR_54760	COG1053	succinate dehydrogenase
AMOR_54790	COG0538	isocitrate dehydrogenase activity
AMOR_54800	COG0039	L-malate dehydrogenase activity
AMOR_54820	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AMOR_54830	COG0105	UTP biosynthetic process
AMOR_54840	COG1253	flavin adenine dinucleotide binding
AMOR_54850	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AMOR_54930	COG0824	Thioesterase
AMOR_54940	COG1494	fructose-1,6-bisphosphatase
AMOR_54970	COG0148	phosphopyruvate hydratase activity
AMOR_54980	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
AMOR_55000	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMOR_55010	COG1024	Enoyl-CoA hydratase
AMOR_55020	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
AMOR_55030	COG1960	acyl-CoA dehydrogenase activity
AMOR_55060	COG1703	isobutyryl-CoA mutase activity
AMOR_55070	COG0571	ribonuclease III activity
AMOR_55100	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMOR_55110	COG1160	GTP binding
AMOR_55190	COG1618	nucleotide phosphatase activity, acting on free nucleotides
AMOR_55300	COG1960	acyl-CoA dehydrogenase activity
AMOR_55310	COG1960	acyl-CoA dehydrogenase activity
AMOR_55320	COG1024	Enoyl-CoA hydratase
AMOR_55330	COG1250	3-hydroxyacyl-CoA dehydrogenase
AMOR_55340	COG2205	protein histidine kinase activity
AMOR_55390	COG0489	protein tyrosine kinase activity
AMOR_55410	COG0598	Magnesium transport protein CorA
AMOR_55420	COG0430	RNA-3'-phosphate cyclase activity
AMOR_55440	COG1595	DNA-templated transcription, initiation
AMOR_55490	COG1187	pseudouridine synthase activity
AMOR_55500	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMOR_55510	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMOR_55520	COG0180	Tryptophanyl-tRNA synthetase
AMOR_55530	COG1994	Peptidase M50
AMOR_55540	COG4974	Belongs to the 'phage' integrase family
AMOR_55550	COG0009	L-threonylcarbamoyladenylate synthase
AMOR_55590	COG0189	ligase activity
AMOR_55600	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AMOR_55620	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AMOR_55680	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMOR_55750	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AMOR_55770	COG0515	serine threonine protein kinase
AMOR_55770	COG2815	serine threonine protein kinase
AMOR_55790	COG2204	response regulator
AMOR_55830	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AMOR_55900	COG1546	Belongs to the CinA family
AMOR_55900	COG1058	Belongs to the CinA family
AMOR_55910	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMOR_55940	COG0436	Aminotransferase
AMOR_55970	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMOR_55990	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AMOR_56030	COG0742	ribosomal rna small subunit methyltransferase
AMOR_56110	COG2205	protein histidine kinase activity
AMOR_56120	COG2205	protein histidine kinase activity
AMOR_56120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AMOR_56170	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
AMOR_56220	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AMOR_56230	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMOR_56270	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
AMOR_56280	COG0646	methionine synthase
AMOR_56280	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
AMOR_56340	COG2204	response regulator
AMOR_56350	COG4191	Histidine kinase
AMOR_56370	COG2133	pyrroloquinoline quinone binding
AMOR_56440	COG2217	Heavy metal translocating P-type atpase
AMOR_56450	COG1937	Protein conserved in bacteria
AMOR_56490	COG0443	Heat shock 70 kDa protein
AMOR_56520	COG0339	signal peptide processing
AMOR_56590	COG1555	photosystem II stabilization
AMOR_56610	COG0527	aspartate kinase activity
AMOR_56640	COG2815	serine threonine protein kinase
AMOR_56640	COG0515	serine threonine protein kinase
AMOR_56650	COG1297	OPT oligopeptide transporter protein
AMOR_56690	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AMOR_56720	COG0084	hydrolase, TatD family'
AMOR_56760	COG0022	dehydrogenase e1 component
AMOR_56770	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
AMOR_56780	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AMOR_56800	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AMOR_56820	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_56820	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_56830	COG1073	alpha beta
AMOR_56830	COG2226	methyltransferase
AMOR_56840	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_56840	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AMOR_56860	COG0644	oxidoreductase
AMOR_56920	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AMOR_56930	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AMOR_56960	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AMOR_56990	COG0564	pseudouridine synthase activity
AMOR_57110	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMOR_57140	COG3360	Dodecin
AMOR_57160	COG1166	arginine decarboxylase activity
AMOR_57220	COG0564	pseudouridine synthase activity
AMOR_57280	COG5002	protein histidine kinase activity
AMOR_57310	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMOR_57320	COG0792	nuclease activity
AMOR_57340	COG0335	large ribosomal subunit rRNA binding
AMOR_57360	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMOR_57370	COG1837	Belongs to the UPF0109 family
AMOR_57380	COG0228	four-way junction DNA binding
AMOR_57410	COG0202	RNA polymerase activity
AMOR_57430	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMOR_57450	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AMOR_57480	COG0201	protein transport
AMOR_57510	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMOR_57520	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMOR_57530	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMOR_57560	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMOR_57580	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMOR_57600	COG0255	Belongs to the universal ribosomal protein uL29 family
AMOR_57610	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMOR_57630	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMOR_57650	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMOR_57660	COG0089	rRNA binding
AMOR_57670	COG0088	Forms part of the polypeptide exit tunnel
AMOR_57680	COG0051	transcription antitermination factor activity, RNA binding
AMOR_57690	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMOR_57700	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMOR_57720	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMOR_57750	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AMOR_57870	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMOR_57880	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMOR_57880	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AMOR_57900	COG1013	pyruvate-flavodoxin oxidoreductase activity
AMOR_57910	COG0674	pyruvate-flavodoxin oxidoreductase activity
AMOR_57910	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AMOR_57920	COG0277	FAD linked oxidase domain protein
AMOR_57940	COG0302	gtp cyclohydrolase
AMOR_57950	COG0720	synthase
AMOR_57970	COG0776	regulation of translation
AMOR_57990	COG0072	phenylalanine-tRNA ligase activity
AMOR_58000	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMOR_58010	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMOR_58070	COG0129	dihydroxy-acid dehydratase activity
AMOR_58090	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AMOR_58100	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AMOR_58110	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMOR_58130	COG0318	PFAM AMP-dependent synthetase and ligase
AMOR_58170	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AMOR_58250	COG3852	Histidine kinase
AMOR_58260	COG5002	protein histidine kinase activity
AMOR_58270	COG1217	gtp-binding protein TYPA
AMOR_58310	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AMOR_58320	COG2204	response regulator
AMOR_58330	COG4191	Histidine kinase
AMOR_58340	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AMOR_58510	COG1032	radical SAM domain protein
AMOR_58590	COG2197	response regulator
AMOR_58600	COG4585	Histidine kinase
AMOR_58620	COG0501	Belongs to the peptidase M48B family
AMOR_58670	COG0509	glycine decarboxylation via glycine cleavage system
AMOR_58680	COG5557	Pfam Polysulphide reductase, NrfD
AMOR_58690	COG3064	Membrane
AMOR_58690	COG0437	4 iron, 4 sulfur cluster binding
AMOR_58710	COG2204	response regulator
AMOR_58740	COG0788	formyltetrahydrofolate deformylase activity
AMOR_58760	COG0408	coproporphyrinogen oxidase activity
AMOR_58780	COG0583	DNA-binding transcription factor activity