locus-tag class description AR1Y2_0001 PF08299 Bacterial dnaA protein helix-turn-helix AR1Y2_0001 PF00308 Bacterial dnaA protein AR1Y2_0001 PF11638 DnaA N-terminal domain AR1Y2_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain AR1Y2_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain AR1Y2_0002 PF02767 DNA polymerase III beta subunit, central domain AR1Y2_0004 PF02463 RecF/RecN/SMC N terminal domain AR1Y2_0005 PF00204 DNA gyrase B AR1Y2_0005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0005 PF01751 Toprim domain AR1Y2_0005 PF00986 DNA gyrase B subunit, carboxyl terminus AR1Y2_0006 PF03989 DNA gyrase C-terminal domain, beta-propeller AR1Y2_0006 PF00521 DNA gyrase/topoisomerase IV, subunit A AR1Y2_0007 PF05681 Fumarate hydratase (Fumerase) AR1Y2_0011 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AR1Y2_0011 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AR1Y2_0012 PF01554 MatE AR1Y2_0014 PF00923 Transaldolase/Fructose-6-phosphate aldolase AR1Y2_0015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0016 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0016 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0016 PF00874 PRD domain AR1Y2_0016 PF05043 Mga helix-turn-helix domain AR1Y2_0016 PF08279 HTH domain AR1Y2_0017 PF08125 Mannitol dehydrogenase C-terminal domain AR1Y2_0017 PF01232 Mannitol dehydrogenase Rossmann domain AR1Y2_0018 PF02378 Phosphotransferase system, EIIC AR1Y2_0018 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0019 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0021 PF03611 PTS system sugar-specific permease component AR1Y2_0023 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0024 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0024 PF00107 Zinc-binding dehydrogenase AR1Y2_0025 PF00834 Ribulose-phosphate 3 epimerase family AR1Y2_0026 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0026 PF00107 Zinc-binding dehydrogenase AR1Y2_0027 PF01380 SIS domain AR1Y2_0029 PF00294 pfkB family carbohydrate kinase AR1Y2_0030 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0031 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_0032 PF01266 FAD dependent oxidoreductase AR1Y2_0033 PF04324 BFD-like [2Fe-2S] binding domain AR1Y2_0033 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_0035 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AR1Y2_0035 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AR1Y2_0041 PF09424 Yqey-like protein AR1Y2_0043 PF01645 Conserved region in glutamate synthase AR1Y2_0044 PF01026 TatD related DNase AR1Y2_0045 PF00398 Ribosomal RNA adenine dimethylase AR1Y2_0047 PF14437 MafB19-like deaminase AR1Y2_0048 PF01544 CorA-like Mg2+ transporter protein AR1Y2_0049 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0050 PF02378 Phosphotransferase system, EIIC AR1Y2_0050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0052 PF03611 PTS system sugar-specific permease component AR1Y2_0053 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_0054 PF00107 Zinc-binding dehydrogenase AR1Y2_0054 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0055 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AR1Y2_0055 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AR1Y2_0057 PF04607 Region found in RelA / SpoT proteins AR1Y2_0063 PF13514 AAA domain AR1Y2_0064 PF00912 Transglycosylase AR1Y2_0064 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_0065 PF14572 Phosphoribosyl synthetase-associated domain AR1Y2_0065 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AR1Y2_0066 PF01695 IstB-like ATP binding protein AR1Y2_0068 PF08245 Mur ligase middle domain AR1Y2_0068 PF02875 Mur ligase family, glutamate ligase domain AR1Y2_0068 PF01225 Mur ligase family, catalytic domain AR1Y2_0069 PF04026 SpoVG AR1Y2_0078 PF06866 Protein of unknown function (DUF1256) AR1Y2_0083 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AR1Y2_0083 PF01276 Orn/Lys/Arg decarboxylase, major domain AR1Y2_0084 PF02223 Thymidylate kinase AR1Y2_0085 PF09115 DNA polymerase III, delta subunit, C terminal AR1Y2_0086 PF04468 PSP1 C-terminal conserved region AR1Y2_0087 PF05175 Methyltransferase small domain AR1Y2_0088 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AR1Y2_0089 PF18277 AbrB C-terminal domain AR1Y2_0089 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AR1Y2_0094 PF01047 MarR family AR1Y2_0095 PF01293 Phosphoenolpyruvate carboxykinase AR1Y2_0097 PF01588 Putative tRNA binding domain AR1Y2_0097 PF09334 tRNA synthetases class I (M) AR1Y2_0099 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0099 PF03610 PTS system fructose IIA component AR1Y2_0100 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0102 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0103 PF00107 Zinc-binding dehydrogenase AR1Y2_0103 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0106 PF01497 Periplasmic binding protein AR1Y2_0107 PF01032 FecCD transport family AR1Y2_0108 PF01032 FecCD transport family AR1Y2_0109 PF00005 ABC transporter AR1Y2_0115 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_0115 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_0116 PF03608 PTS system enzyme II sorbitol-specific factor AR1Y2_0118 PF00107 Zinc-binding dehydrogenase AR1Y2_0118 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0119 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0120 PF04198 Putative sugar-binding domain AR1Y2_0125 PF02441 Flavoprotein AR1Y2_0126 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AR1Y2_0127 PF03466 LysR substrate binding domain AR1Y2_0127 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_0128 PF07859 alpha/beta hydrolase fold AR1Y2_0129 PF02378 Phosphotransferase system, EIIC AR1Y2_0129 PF00367 phosphotransferase system, EIIB AR1Y2_0129 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_0130 PF03123 CAT RNA binding domain AR1Y2_0130 PF00874 PRD domain AR1Y2_0131 PF01713 Smr domain AR1Y2_0131 PF00488 MutS domain V AR1Y2_0133 PF01966 HD domain AR1Y2_0134 PF01938 TRAM domain AR1Y2_0134 PF05958 tRNA (Uracil-5-)-methyltransferase AR1Y2_0136 PF17761 DUF1016 N-terminal domain AR1Y2_0136 PF06250 YhcG PDDEXK nuclease domain AR1Y2_0142 PF00293 NUDIX domain AR1Y2_0144 PF00072 Response regulator receiver domain AR1Y2_0144 PF00497 Bacterial extracellular solute-binding proteins, family 3 AR1Y2_0144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0144 PF00989 PAS fold AR1Y2_0144 PF01627 Hpt domain AR1Y2_0144 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0147 PF08448 PAS fold AR1Y2_0147 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0148 PF01209 ubiE/COQ5 methyltransferase family AR1Y2_0149 PF13673 Acetyltransferase (GNAT) domain AR1Y2_0154 PF00730 HhH-GPD superfamily base excision DNA repair protein AR1Y2_0154 PF00633 Helix-hairpin-helix motif AR1Y2_0155 PF17158 Membrane-associated sensor, integral membrane domain AR1Y2_0155 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0163 PF02796 Helix-turn-helix domain of resolvase AR1Y2_0163 PF00239 Resolvase, N terminal domain AR1Y2_0168 PF00293 NUDIX domain AR1Y2_0169 PF00578 AhpC/TSA family AR1Y2_0170 PF02683 Cytochrome C biogenesis protein transmembrane region AR1Y2_0171 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_0171 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AR1Y2_0175 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_0177 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_0182 PF00156 Phosphoribosyl transferase domain AR1Y2_0183 PF00958 GMP synthase C terminal domain AR1Y2_0183 PF00117 Glutamine amidotransferase class-I AR1Y2_0184 PF01797 Transposase IS200 like AR1Y2_0185 PF01797 Transposase IS200 like AR1Y2_0188 PF13476 AAA domain AR1Y2_0189 PF00266 Aminotransferase class-V AR1Y2_0190 PF00589 Phage integrase family AR1Y2_0190 PF02920 DNA binding domain of tn916 integrase AR1Y2_0191 PF09035 Excisionase from transposon Tn916 AR1Y2_0195 PF00271 Helicase conserved C-terminal domain AR1Y2_0195 PF00176 SNF2 family N-terminal domain AR1Y2_0195 PF04434 SWIM zinc finger AR1Y2_0196 PF00156 Phosphoribosyl transferase domain AR1Y2_0197 PF00874 PRD domain AR1Y2_0197 PF00158 Sigma-54 interaction domain AR1Y2_0199 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0200 PF03609 PTS system sorbose-specific iic component AR1Y2_0201 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0202 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_0202 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_0203 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AR1Y2_0206 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_0207 PF09084 NMT1/THI5 like AR1Y2_0208 PF00005 ABC transporter AR1Y2_0214 PF03611 PTS system sugar-specific permease component AR1Y2_0215 PF01842 ACT domain AR1Y2_0215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_0215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_0216 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_0217 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0217 PF00107 Zinc-binding dehydrogenase AR1Y2_0218 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_0221 PF06445 GyrI-like small molecule binding domain AR1Y2_0221 PF12833 Helix-turn-helix domain AR1Y2_0224 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0225 PF00107 Zinc-binding dehydrogenase AR1Y2_0225 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0226 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0228 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0230 PF07702 UTRA domain AR1Y2_0230 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_0235 PF01739 CheR methyltransferase, SAM binding domain AR1Y2_0235 PF03705 CheR methyltransferase, all-alpha domain AR1Y2_0236 PF14492 Elongation Factor G, domain II AR1Y2_0236 PF00679 Elongation factor G C-terminus AR1Y2_0236 PF03764 Elongation factor G, domain IV AR1Y2_0236 PF00009 Elongation factor Tu GTP binding domain AR1Y2_0237 PF01381 Helix-turn-helix AR1Y2_0242 PF04055 Radical SAM superfamily AR1Y2_0242 PF06463 Molybdenum Cofactor Synthesis C AR1Y2_0243 PF18665 Tetracyclin repressor-like, C-terminal domain AR1Y2_0243 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_0249 PF00570 HRDC domain AR1Y2_0249 PF16124 RecQ zinc-binding AR1Y2_0249 PF09382 RQC domain AR1Y2_0249 PF00270 DEAD/DEAH box helicase AR1Y2_0249 PF00271 Helicase conserved C-terminal domain AR1Y2_0250 PF01327 Polypeptide deformylase AR1Y2_0251 PF08241 Methyltransferase domain AR1Y2_0252 PF07729 FCD domain AR1Y2_0252 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_0254 PF00107 Zinc-binding dehydrogenase AR1Y2_0254 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0255 PF02378 Phosphotransferase system, EIIC AR1Y2_0255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0257 PF03611 PTS system sugar-specific permease component AR1Y2_0259 PF02733 Dak1 domain AR1Y2_0260 PF02734 DAK2 domain AR1Y2_0261 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_0263 PF00920 Dehydratase family AR1Y2_0264 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0264 PF00107 Zinc-binding dehydrogenase AR1Y2_0265 PF00155 Aminotransferase class I and II AR1Y2_0266 PF13520 Amino acid permease AR1Y2_0269 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_0269 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_0270 PF01081 KDPG and KHG aldolase AR1Y2_0272 PF00664 ABC transporter transmembrane region AR1Y2_0272 PF00005 ABC transporter AR1Y2_0279 PF00563 EAL domain AR1Y2_0279 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_0279 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0288 PF00793 DAHP synthetase I family AR1Y2_0288 PF18152 DAHP synthase ferredoxin-like domain AR1Y2_0289 PF01195 Peptidyl-tRNA hydrolase AR1Y2_0290 PF03461 TRCF domain AR1Y2_0290 PF00270 DEAD/DEAH box helicase AR1Y2_0290 PF00271 Helicase conserved C-terminal domain AR1Y2_0290 PF02559 CarD-like/TRCF domain AR1Y2_0290 PF17757 UvrB interaction domain AR1Y2_0293 PF01250 Ribosomal protein S6 AR1Y2_0294 PF00436 Single-strand binding protein family AR1Y2_0295 PF01084 Ribosomal protein S18 AR1Y2_0296 PF02272 DHHA1 domain AR1Y2_0296 PF01368 DHH family AR1Y2_0297 PF01281 Ribosomal protein L9, N-terminal domain AR1Y2_0297 PF03948 Ribosomal protein L9, C-terminal domain AR1Y2_0298 PF03796 DnaB-like helicase C terminal domain AR1Y2_0298 PF00772 DnaB-like helicase N terminal domain AR1Y2_0302 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0303 PF03611 PTS system sugar-specific permease component AR1Y2_0304 PF02733 Dak1 domain AR1Y2_0306 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_0307 PF02733 Dak1 domain AR1Y2_0315 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_0317 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_0317 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_0320 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_0321 PF01235 Sodium:alanine symporter family AR1Y2_0322 PF03481 Putative GTP-binding controlling metal-binding AR1Y2_0322 PF01300 Telomere recombination AR1Y2_0323 PF02502 Ribose/Galactose Isomerase AR1Y2_0327 PF00119 ATP synthase A chain AR1Y2_0328 PF00137 ATP synthase subunit C AR1Y2_0329 PF00430 ATP synthase B/B' CF(0) AR1Y2_0330 PF00213 ATP synthase delta (OSCP) subunit AR1Y2_0331 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_0331 PF02874 ATP synthase alpha/beta family, beta-barrel domain AR1Y2_0331 PF00306 ATP synthase alpha/beta chain, C terminal domain AR1Y2_0332 PF00231 ATP synthase AR1Y2_0333 PF02874 ATP synthase alpha/beta family, beta-barrel domain AR1Y2_0333 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_0334 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AR1Y2_0334 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AR1Y2_0337 PF02390 Putative methyltransferase AR1Y2_0339 PF00085 Thioredoxin AR1Y2_0340 PF12848 ABC transporter AR1Y2_0340 PF16326 ABC transporter C-terminal domain AR1Y2_0340 PF00005 ABC transporter AR1Y2_0342 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_0342 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_0343 PF06580 Histidine kinase AR1Y2_0343 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0343 PF02743 Cache domain AR1Y2_0343 PF00672 HAMP domain AR1Y2_0344 PF00072 Response regulator receiver domain AR1Y2_0344 PF12833 Helix-turn-helix domain AR1Y2_0345 PF01261 Xylose isomerase-like TIM barrel AR1Y2_0347 PF01594 AI-2E family transporter AR1Y2_0348 PF00795 Carbon-nitrogen hydrolase AR1Y2_0349 PF00005 ABC transporter AR1Y2_0351 PF13302 Acetyltransferase (GNAT) domain AR1Y2_0352 PF01894 Uncharacterised protein family UPF0047 AR1Y2_0354 PF04203 Sortase domain AR1Y2_0356 PF02558 Ketopantoate reductase PanE/ApbA AR1Y2_0356 PF08546 Ketopantoate reductase PanE/ApbA C terminal AR1Y2_0358 PF17783 CvfB-like winged helix domain AR1Y2_0358 PF13509 S1 domain AR1Y2_0359 PF03819 MazG nucleotide pyrophosphohydrolase domain AR1Y2_0360 PF00216 Bacterial DNA-binding protein AR1Y2_0361 PF01479 S4 domain AR1Y2_0362 PF07873 YabP family AR1Y2_0365 PF08279 HTH domain AR1Y2_0365 PF05043 Mga helix-turn-helix domain AR1Y2_0365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0365 PF00874 PRD domain AR1Y2_0366 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0368 PF03611 PTS system sugar-specific permease component AR1Y2_0370 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0371 PF01791 DeoC/LacD family aldolase AR1Y2_0372 PF00294 pfkB family carbohydrate kinase AR1Y2_0377 PF05593 RHS Repeat AR1Y2_0377 PF05593 RHS Repeat AR1Y2_0389 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AR1Y2_0389 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_0391 PF06736 Protein of unknown function (DUF1211) AR1Y2_0394 PF01171 PP-loop family AR1Y2_0394 PF11734 TilS substrate C-terminal domain AR1Y2_0395 PF00156 Phosphoribosyl transferase domain AR1Y2_0396 PF00004 ATPase family associated with various cellular activities (AAA) AR1Y2_0396 PF17862 AAA+ lid domain AR1Y2_0396 PF01434 Peptidase family M41 AR1Y2_0397 PF00375 Sodium:dicarboxylate symporter family AR1Y2_0398 PF01554 MatE AR1Y2_0402 PF00313 'Cold-shock' DNA-binding domain AR1Y2_0409 PF01695 IstB-like ATP binding protein AR1Y2_0411 PF10668 Phage terminase small subunit AR1Y2_0411 PF03592 Terminase small subunit AR1Y2_0436 PF01381 Helix-turn-helix AR1Y2_0437 PF00437 Type II/IV secretion system protein AR1Y2_0453 PF03949 Malic enzyme, NAD binding domain AR1Y2_0453 PF00390 Malic enzyme, N-terminal domain AR1Y2_0455 PF01554 MatE AR1Y2_0458 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_0458 PF18665 Tetracyclin repressor-like, C-terminal domain AR1Y2_0459 PF02446 4-alpha-glucanotransferase AR1Y2_0460 PF00633 Helix-hairpin-helix motif AR1Y2_0460 PF00730 HhH-GPD superfamily base excision DNA repair protein AR1Y2_0461 PF07733 Bacterial DNA polymerase III alpha NTPase domain AR1Y2_0461 PF00929 Exonuclease AR1Y2_0461 PF02811 PHP domain AR1Y2_0461 PF14579 Helix-hairpin-helix motif AR1Y2_0461 PF11490 DNA polymerase III polC-type N-terminus II AR1Y2_0461 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AR1Y2_0462 PF04294 VanW like protein AR1Y2_0463 PF00586 AIR synthase related protein, N-terminal domain AR1Y2_0463 PF02769 AIR synthase related protein, C-terminal domain AR1Y2_0463 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AR1Y2_0464 PF01037 Lrp/AsnC ligand binding domain AR1Y2_0465 PF00155 Aminotransferase class I and II AR1Y2_0466 PF00588 SpoU rRNA Methylase family AR1Y2_0468 PF03129 Anticodon binding domain AR1Y2_0468 PF09180 Prolyl-tRNA synthetase, C-terminal AR1Y2_0468 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AR1Y2_0469 PF12627 Probable RNA and SrmB- binding site of polymerase A AR1Y2_0469 PF13735 tRNA nucleotidyltransferase domain 2 putative AR1Y2_0469 PF01743 Poly A polymerase head domain AR1Y2_0472 PF01177 Asp/Glu/Hydantoin racemase AR1Y2_0479 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_0479 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0479 PF00563 EAL domain AR1Y2_0481 PF01053 Cys/Met metabolism PLP-dependent enzyme AR1Y2_0482 PF02219 Methylenetetrahydrofolate reductase AR1Y2_0484 PF00809 Pterin binding enzyme AR1Y2_0484 PF02965 Vitamin B12 dependent methionine synthase, activation domain AR1Y2_0484 PF02607 B12 binding domain AR1Y2_0484 PF02574 Homocysteine S-methyltransferase AR1Y2_0484 PF02310 B12 binding domain AR1Y2_0485 PF03591 AzlC protein AR1Y2_0486 PF05437 Branched-chain amino acid transport protein (AzlD) AR1Y2_0487 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0488 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AR1Y2_0490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AR1Y2_0491 PF05043 Mga helix-turn-helix domain AR1Y2_0491 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0491 PF00874 PRD domain AR1Y2_0491 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0491 PF08279 HTH domain AR1Y2_0495 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0497 PF00107 Zinc-binding dehydrogenase AR1Y2_0497 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0498 PF00834 Ribulose-phosphate 3 epimerase family AR1Y2_0499 PF01380 SIS domain AR1Y2_0500 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0501 PF00107 Zinc-binding dehydrogenase AR1Y2_0501 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0502 PF04198 Putative sugar-binding domain AR1Y2_0505 PF01791 DeoC/LacD family aldolase AR1Y2_0506 PF04198 Putative sugar-binding domain AR1Y2_0508 PF03608 PTS system enzyme II sorbitol-specific factor AR1Y2_0509 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_0509 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_0510 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_0510 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_0512 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0512 PF00107 Zinc-binding dehydrogenase AR1Y2_0513 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0514 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_0515 PF03315 Serine dehydratase beta chain AR1Y2_0515 PF01842 ACT domain AR1Y2_0516 PF03313 Serine dehydratase alpha chain AR1Y2_0517 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0518 PF01380 SIS domain AR1Y2_0518 PF01418 Helix-turn-helix domain, rpiR family AR1Y2_0519 PF00294 pfkB family carbohydrate kinase AR1Y2_0520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0521 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0521 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0522 PF00455 DeoR C terminal sensor domain AR1Y2_0522 PF08220 DeoR-like helix-turn-helix domain AR1Y2_0524 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0524 PF00107 Zinc-binding dehydrogenase AR1Y2_0525 PF02885 Glycosyl transferase family, helical bundle domain AR1Y2_0525 PF00591 Glycosyl transferase family, a/b domain AR1Y2_0525 PF00117 Glutamine amidotransferase class-I AR1Y2_0526 PF00425 chorismate binding enzyme AR1Y2_0526 PF04715 Anthranilate synthase component I, N terminal region AR1Y2_0529 PF00149 Calcineurin-like phosphoesterase AR1Y2_0530 PF01638 HxlR-like helix-turn-helix AR1Y2_0532 PF01661 Macro domain AR1Y2_0535 PF00892 EamA-like transporter family AR1Y2_0536 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_0536 PF03466 LysR substrate binding domain AR1Y2_0539 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AR1Y2_0539 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AR1Y2_0541 PF00731 AIR carboxylase AR1Y2_0542 PF01969 Protein of unknown function DUF111 AR1Y2_0543 PF01969 Protein of unknown function DUF111 AR1Y2_0544 PF02540 NAD synthase AR1Y2_0545 PF13190 PDGLE domain AR1Y2_0545 PF01891 Cobalt uptake substrate-specific transmembrane region AR1Y2_0547 PF00005 ABC transporter AR1Y2_0548 PF13411 MerR HTH family regulatory protein AR1Y2_0549 PF00563 EAL domain AR1Y2_0549 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0549 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_0550 PF00152 tRNA synthetases class II (D, K and N) AR1Y2_0550 PF02938 GAD domain AR1Y2_0550 PF01336 OB-fold nucleic acid binding domain AR1Y2_0552 PF00158 Sigma-54 interaction domain AR1Y2_0552 PF03610 PTS system fructose IIA component AR1Y2_0552 PF00874 PRD domain AR1Y2_0555 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0557 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0558 PF03609 PTS system sorbose-specific iic component AR1Y2_0559 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0560 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0561 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_0562 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0562 PF00107 Zinc-binding dehydrogenase AR1Y2_0564 PF01144 Coenzyme A transferase AR1Y2_0565 PF01144 Coenzyme A transferase AR1Y2_0566 PF00378 Enoyl-CoA hydratase/isomerase AR1Y2_0569 PF00654 Voltage gated chloride channel AR1Y2_0570 PF03167 Uracil DNA glycosylase superfamily AR1Y2_0573 PF07943 Penicillin-binding protein 5, C-terminal domain AR1Y2_0573 PF00768 D-alanyl-D-alanine carboxypeptidase AR1Y2_0574 PF00781 Diacylglycerol kinase catalytic domain AR1Y2_0580 PF01590 GAF domain AR1Y2_0580 PF00563 EAL domain AR1Y2_0580 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0580 PF00360 Phytochrome region AR1Y2_0581 PF02901 Pyruvate formate lyase-like AR1Y2_0581 PF01228 Glycine radical AR1Y2_0582 PF04055 Radical SAM superfamily AR1Y2_0582 PF13187 4Fe-4S dicluster domain AR1Y2_0583 PF03610 PTS system fructose IIA component AR1Y2_0584 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0585 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0586 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_0587 PF00325 Bacterial regulatory proteins, crp family AR1Y2_0587 PF04198 Putative sugar-binding domain AR1Y2_0588 PF07859 alpha/beta hydrolase fold AR1Y2_0589 PF00309 Sigma-54 factor, Activator interacting domain (AID) AR1Y2_0589 PF04552 Sigma-54, DNA binding domain AR1Y2_0589 PF04963 Sigma-54 factor, core binding domain AR1Y2_0591 PF00874 PRD domain AR1Y2_0591 PF03610 PTS system fructose IIA component AR1Y2_0591 PF00158 Sigma-54 interaction domain AR1Y2_0592 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0594 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0594 PF00107 Zinc-binding dehydrogenase AR1Y2_0595 PF03830 PTS system sorbose subfamily IIB component AR1Y2_0596 PF03609 PTS system sorbose-specific iic component AR1Y2_0598 PF08125 Mannitol dehydrogenase C-terminal domain AR1Y2_0598 PF01232 Mannitol dehydrogenase Rossmann domain AR1Y2_0599 PF00248 Aldo/keto reductase family AR1Y2_0601 PF01235 Sodium:alanine symporter family AR1Y2_0604 PF00005 ABC transporter AR1Y2_0607 PF00072 Response regulator receiver domain AR1Y2_0607 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_0608 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0608 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0609 PF00909 Ammonium Transporter Family AR1Y2_0610 PF00543 Nitrogen regulatory protein P-II AR1Y2_0611 PF00892 EamA-like transporter family AR1Y2_0613 PF02082 Transcriptional regulator AR1Y2_0617 PF01170 Putative RNA methylase family UPF0020 AR1Y2_0617 PF02926 THUMP domain AR1Y2_0618 PF01725 Ham1 family AR1Y2_0620 PF05958 tRNA (Uracil-5-)-methyltransferase AR1Y2_0623 PF08713 DNA alkylation repair enzyme AR1Y2_0624 PF03880 DbpA RNA binding domain AR1Y2_0624 PF00270 DEAD/DEAH box helicase AR1Y2_0624 PF00271 Helicase conserved C-terminal domain AR1Y2_0629 PF03466 LysR substrate binding domain AR1Y2_0629 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_0630 PF00860 Permease family AR1Y2_0631 PF01979 Amidohydrolase family AR1Y2_0631 PF13382 Adenine deaminase C-terminal domain AR1Y2_0634 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0634 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0634 PF08279 HTH domain AR1Y2_0634 PF00874 PRD domain AR1Y2_0634 PF05043 Mga helix-turn-helix domain AR1Y2_0636 PF03611 PTS system sugar-specific permease component AR1Y2_0637 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0638 PF00456 Transketolase, thiamine diphosphate binding domain AR1Y2_0640 PF02595 Glycerate kinase family AR1Y2_0641 PF08003 Protein of unknown function (DUF1698) AR1Y2_0645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0645 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0645 PF01627 Hpt domain AR1Y2_0645 PF00072 Response regulator receiver domain AR1Y2_0646 PF08543 Phosphomethylpyrimidine kinase AR1Y2_0649 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_0650 PF00571 CBS domain AR1Y2_0650 PF00005 ABC transporter AR1Y2_0651 PF12833 Helix-turn-helix domain AR1Y2_0652 PF07702 UTRA domain AR1Y2_0652 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_0653 PF02378 Phosphotransferase system, EIIC AR1Y2_0653 PF00367 phosphotransferase system, EIIB AR1Y2_0654 PF16657 Maltogenic Amylase, C-terminal domain AR1Y2_0654 PF00128 Alpha amylase, catalytic domain AR1Y2_0657 PF07702 UTRA domain AR1Y2_0657 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_0658 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AR1Y2_0660 PF03608 PTS system enzyme II sorbitol-specific factor AR1Y2_0661 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_0661 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_0662 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_0662 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_0667 PF01261 Xylose isomerase-like TIM barrel AR1Y2_0671 PF02673 Bacitracin resistance protein BacA AR1Y2_0673 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_0673 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AR1Y2_0674 PF01979 Amidohydrolase family AR1Y2_0674 PF13382 Adenine deaminase C-terminal domain AR1Y2_0677 PF00753 Metallo-beta-lactamase superfamily AR1Y2_0677 PF12706 Beta-lactamase superfamily domain AR1Y2_0679 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0679 PF00072 Response regulator receiver domain AR1Y2_0679 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0679 PF09308 LuxQ, periplasmic AR1Y2_0681 PF00005 ABC transporter AR1Y2_0681 PF00664 ABC transporter transmembrane region AR1Y2_0682 PF00005 ABC transporter AR1Y2_0682 PF00664 ABC transporter transmembrane region AR1Y2_0687 PF00072 Response regulator receiver domain AR1Y2_0688 PF00072 Response regulator receiver domain AR1Y2_0688 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0688 PF09308 LuxQ, periplasmic AR1Y2_0688 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0689 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AR1Y2_0689 PF01871 AMMECR1 AR1Y2_0690 PF04055 Radical SAM superfamily AR1Y2_0693 PF07694 5TMR of 5TMR-LYT AR1Y2_0693 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0694 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0694 PF13426 PAS domain AR1Y2_0694 PF00563 EAL domain AR1Y2_0695 PF03717 Penicillin-binding Protein dimerisation domain AR1Y2_0695 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_0695 PF05223 NTF2-like N-terminal transpeptidase domain AR1Y2_0696 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_0696 PF05569 BlaR1 peptidase M56 AR1Y2_0697 PF03965 Penicillinase repressor AR1Y2_0699 PF00285 Citrate synthase, C-terminal domain AR1Y2_0701 PF01047 MarR family AR1Y2_0702 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0702 PF17151 Periplasmic sensor domain AR1Y2_0703 PF02595 Glycerate kinase family AR1Y2_0704 PF00561 alpha/beta hydrolase fold AR1Y2_0705 PF03447 Homoserine dehydrogenase, NAD binding domain AR1Y2_0705 PF01842 ACT domain AR1Y2_0705 PF00742 Homoserine dehydrogenase AR1Y2_0706 PF00892 EamA-like transporter family AR1Y2_0707 PF03814 Potassium-transporting ATPase A subunit AR1Y2_0709 PF02669 K+-transporting ATPase, c chain AR1Y2_0710 PF13493 Domain of unknown function (DUF4118) AR1Y2_0710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0710 PF02702 Osmosensitive K+ channel His kinase sensor domain AR1Y2_0710 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0711 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_0711 PF00072 Response regulator receiver domain AR1Y2_0712 PF13493 Domain of unknown function (DUF4118) AR1Y2_0712 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0712 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0712 PF02702 Osmosensitive K+ channel His kinase sensor domain AR1Y2_0713 PF00072 Response regulator receiver domain AR1Y2_0713 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_0714 PF12838 4Fe-4S dicluster domain AR1Y2_0715 PF01022 Bacterial regulatory protein, arsR family AR1Y2_0718 PF00248 Aldo/keto reductase family AR1Y2_0720 PF00258 Flavodoxin AR1Y2_0723 PF00005 ABC transporter AR1Y2_0725 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_0725 PF00072 Response regulator receiver domain AR1Y2_0726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0728 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_0728 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_0729 PF01261 Xylose isomerase-like TIM barrel AR1Y2_0730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_0730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_0731 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0731 PF00107 Zinc-binding dehydrogenase AR1Y2_0734 PF06445 GyrI-like small molecule binding domain AR1Y2_0734 PF12833 Helix-turn-helix domain AR1Y2_0735 PF00183 Hsp90 protein AR1Y2_0736 PF00355 Rieske [2Fe-2S] domain AR1Y2_0736 PF01266 FAD dependent oxidoreductase AR1Y2_0739 PF03190 Protein of unknown function, DUF255 AR1Y2_0741 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_0741 PF00072 Response regulator receiver domain AR1Y2_0742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_0742 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_0743 PF00933 Glycosyl hydrolase family 3 N terminal domain AR1Y2_0743 PF01915 Glycosyl hydrolase family 3 C-terminal domain AR1Y2_0744 PF01259 SAICAR synthetase AR1Y2_0745 PF00156 Phosphoribosyl transferase domain AR1Y2_0746 PF10397 Adenylosuccinate lyase C-terminus AR1Y2_0746 PF00206 Lyase AR1Y2_0747 PF00781 Diacylglycerol kinase catalytic domain AR1Y2_0748 PF01979 Amidohydrolase family AR1Y2_0749 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_0750 PF00923 Transaldolase/Fructose-6-phosphate aldolase AR1Y2_0751 PF00456 Transketolase, thiamine diphosphate binding domain AR1Y2_0752 PF02780 Transketolase, C-terminal domain AR1Y2_0752 PF02779 Transketolase, pyrimidine binding domain AR1Y2_0753 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0753 PF08279 HTH domain AR1Y2_0753 PF05043 Mga helix-turn-helix domain AR1Y2_0753 PF00874 PRD domain AR1Y2_0754 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0756 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0757 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0758 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0759 PF00480 ROK family AR1Y2_0760 PF00294 pfkB family carbohydrate kinase AR1Y2_0762 PF01380 SIS domain AR1Y2_0764 PF00884 Sulfatase AR1Y2_0765 PF05698 Bacterial trigger factor protein (TF) C-terminus AR1Y2_0765 PF05697 Bacterial trigger factor protein (TF) AR1Y2_0765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AR1Y2_0766 PF00574 Clp protease AR1Y2_0767 PF07724 AAA domain (Cdc48 subfamily) AR1Y2_0767 PF10431 C-terminal, D2-small domain, of ClpB protein AR1Y2_0767 PF06689 ClpX C4-type zinc finger AR1Y2_0768 PF00004 ATPase family associated with various cellular activities (AAA) AR1Y2_0768 PF05362 Lon protease (S16) C-terminal proteolytic domain AR1Y2_0768 PF02190 ATP-dependent protease La (LON) substrate-binding domain AR1Y2_0769 PF02875 Mur ligase family, glutamate ligase domain AR1Y2_0769 PF08245 Mur ligase middle domain AR1Y2_0771 PF00809 Pterin binding enzyme AR1Y2_0772 PF02152 Dihydroneopterin aldolase AR1Y2_0772 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AR1Y2_0773 PF01842 ACT domain AR1Y2_0773 PF00800 Prephenate dehydratase AR1Y2_0773 PF01817 Chorismate mutase type II AR1Y2_0774 PF00884 Sulfatase AR1Y2_0775 PF00709 Adenylosuccinate synthetase AR1Y2_0776 PF10502 Signal peptidase, peptidase S26 AR1Y2_0778 PF01042 Endoribonuclease L-PSP AR1Y2_0779 PF05230 MASE2 domain AR1Y2_0779 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0780 PF01554 MatE AR1Y2_0781 PF00128 Alpha amylase, catalytic domain AR1Y2_0781 PF16657 Maltogenic Amylase, C-terminal domain AR1Y2_0783 PF01872 RibD C-terminal domain AR1Y2_0783 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AR1Y2_0784 PF00677 Lumazine binding domain AR1Y2_0785 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AR1Y2_0785 PF00925 GTP cyclohydrolase II AR1Y2_0786 PF00885 6,7-dimethyl-8-ribityllumazine synthase AR1Y2_0787 PF02146 Sir2 family AR1Y2_0791 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_0793 PF00288 GHMP kinases N terminal domain AR1Y2_0793 PF08544 GHMP kinases C terminal AR1Y2_0793 PF10509 Galactokinase galactose-binding signature AR1Y2_0794 PF01263 Aldose 1-epimerase AR1Y2_0795 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AR1Y2_0795 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AR1Y2_0796 PF16363 GDP-mannose 4,6 dehydratase AR1Y2_0797 PF04397 LytTr DNA-binding domain AR1Y2_0797 PF00072 Response regulator receiver domain AR1Y2_0799 PF06397 Desulfoferrodoxin, N-terminal domain AR1Y2_0799 PF01880 Desulfoferrodoxin AR1Y2_0801 PF02441 Flavoprotein AR1Y2_0802 PF00733 Asparagine synthase AR1Y2_0802 PF13537 Glutamine amidotransferase domain AR1Y2_0807 PF00589 Phage integrase family AR1Y2_0807 PF02899 Phage integrase, N-terminal SAM-like domain AR1Y2_0854 PF02735 Ku70/Ku80 beta-barrel domain AR1Y2_0855 PF01068 ATP dependent DNA ligase domain AR1Y2_0856 PF08279 HTH domain AR1Y2_0856 PF13280 WYL domain AR1Y2_0860 PF03180 NLPA lipoprotein AR1Y2_0861 PF00005 ABC transporter AR1Y2_0861 PF09383 NIL domain AR1Y2_0862 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_0863 PF01565 FAD binding domain AR1Y2_0863 PF02913 FAD linked oxidases, C-terminal domain AR1Y2_0865 PF01784 NIF3 (NGG1p interacting factor 3) AR1Y2_0868 PF01381 Helix-turn-helix AR1Y2_0872 PF17862 AAA+ lid domain AR1Y2_0872 PF01434 Peptidase family M41 AR1Y2_0872 PF00004 ATPase family associated with various cellular activities (AAA) AR1Y2_0874 PF01661 Macro domain AR1Y2_0876 PF00301 Rubredoxin AR1Y2_0877 PF04073 Aminoacyl-tRNA editing domain AR1Y2_0878 PF00484 Carbonic anhydrase AR1Y2_0879 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AR1Y2_0885 PF00005 ABC transporter AR1Y2_0887 PF00128 Alpha amylase, catalytic domain AR1Y2_0887 PF16657 Maltogenic Amylase, C-terminal domain AR1Y2_0887 PF02903 Alpha amylase, N-terminal ig-like domain AR1Y2_0888 PF12072 Domain of unknown function (DUF3552) AR1Y2_0888 PF00013 KH domain AR1Y2_0888 PF01966 HD domain AR1Y2_0889 PF00106 short chain dehydrogenase AR1Y2_0890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0890 PF02378 Phosphotransferase system, EIIC AR1Y2_0890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0891 PF08220 DeoR-like helix-turn-helix domain AR1Y2_0891 PF00455 DeoR C terminal sensor domain AR1Y2_0892 PF08125 Mannitol dehydrogenase C-terminal domain AR1Y2_0892 PF01232 Mannitol dehydrogenase Rossmann domain AR1Y2_0894 PF00293 NUDIX domain AR1Y2_0896 PF00793 DAHP synthetase I family AR1Y2_0897 PF12822 ECF transporter, substrate-specific component AR1Y2_0899 PF00300 Histidine phosphatase superfamily (branch 1) AR1Y2_0901 PF01546 Peptidase family M20/M25/M40 AR1Y2_0901 PF07687 Peptidase dimerisation domain AR1Y2_0902 PF00291 Pyridoxal-phosphate dependent enzyme AR1Y2_0902 PF14821 Threonine synthase N terminus AR1Y2_0907 PF00005 ABC transporter AR1Y2_0908 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_0910 PF00069 Protein kinase domain AR1Y2_0910 PF03793 PASTA domain AR1Y2_0912 PF00575 S1 RNA binding domain AR1Y2_0913 PF01264 Chorismate synthase AR1Y2_0914 PF01702 Queuine tRNA-ribosyltransferase AR1Y2_0917 PF00009 Elongation factor Tu GTP binding domain AR1Y2_0917 PF03764 Elongation factor G, domain IV AR1Y2_0917 PF14492 Elongation Factor G, domain II AR1Y2_0917 PF00679 Elongation factor G C-terminus AR1Y2_0923 PF01076 Plasmid recombination enzyme AR1Y2_0924 PF02195 ParB-like nuclease domain AR1Y2_0924 PF17762 HTH domain found in ParB protein AR1Y2_0925 PF02229 Transcriptional Coactivator p15 (PC4) AR1Y2_0928 PF01717 Cobalamin-independent synthase, Catalytic domain AR1Y2_0930 PF02811 PHP domain AR1Y2_0933 PF07549 SecD/SecF GG Motif AR1Y2_0933 PF02355 Protein export membrane protein AR1Y2_0934 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AR1Y2_0934 PF02272 DHHA1 domain AR1Y2_0934 PF17768 RecJ OB domain AR1Y2_0934 PF01368 DHH family AR1Y2_0936 PF00149 Calcineurin-like phosphoesterase AR1Y2_0936 PF12320 Type 5 capsule protein repressor C-terminal domain AR1Y2_0937 PF13476 AAA domain AR1Y2_0940 PF02542 YgbB family AR1Y2_0944 PF00849 RNA pseudouridylate synthase AR1Y2_0944 PF01479 S4 domain AR1Y2_0947 PF04204 Homoserine O-succinyltransferase AR1Y2_0948 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_0948 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_0948 PF01842 ACT domain AR1Y2_0949 PF02378 Phosphotransferase system, EIIC AR1Y2_0949 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0953 PF08220 DeoR-like helix-turn-helix domain AR1Y2_0953 PF00455 DeoR C terminal sensor domain AR1Y2_0954 PF13187 4Fe-4S dicluster domain AR1Y2_0954 PF04055 Radical SAM superfamily AR1Y2_0956 PF00923 Transaldolase/Fructose-6-phosphate aldolase AR1Y2_0959 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_0959 PF02378 Phosphotransferase system, EIIC AR1Y2_0960 PF00107 Zinc-binding dehydrogenase AR1Y2_0960 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_0961 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_0962 PF08279 HTH domain AR1Y2_0962 PF05043 Mga helix-turn-helix domain AR1Y2_0962 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0962 PF00874 PRD domain AR1Y2_0963 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_0965 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_0966 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_0967 PF13567 Domain of unknown function (DUF4131) AR1Y2_0967 PF00753 Metallo-beta-lactamase superfamily AR1Y2_0967 PF03772 Competence protein AR1Y2_0968 PF13416 Bacterial extracellular solute-binding protein AR1Y2_0969 PF00543 Nitrogen regulatory protein P-II AR1Y2_0970 PF00005 ABC transporter AR1Y2_0970 PF08402 TOBE domain AR1Y2_0971 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_0972 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_0974 PF17910 FeoB cytosolic helical domain AR1Y2_0974 PF07664 Ferrous iron transport protein B C terminus AR1Y2_0974 PF02421 Ferrous iron transport protein B AR1Y2_0974 PF07670 Nucleoside recognition AR1Y2_0975 PF12146 Serine aminopeptidase, S33 AR1Y2_0977 PF00817 impB/mucB/samB family AR1Y2_0977 PF11799 impB/mucB/samB family C-terminal domain AR1Y2_0980 PF00391 PEP-utilising enzyme, mobile domain AR1Y2_0980 PF02896 PEP-utilising enzyme, TIM barrel domain AR1Y2_0980 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AR1Y2_0982 PF00113 Enolase, C-terminal TIM barrel domain AR1Y2_0982 PF03952 Enolase, N-terminal domain AR1Y2_0983 PF00578 AhpC/TSA family AR1Y2_0984 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_0987 PF04954 Siderophore-interacting protein AR1Y2_0987 PF08021 Siderophore-interacting FAD-binding domain AR1Y2_0987 PF00005 ABC transporter AR1Y2_0987 PF00664 ABC transporter transmembrane region AR1Y2_0988 PF00005 ABC transporter AR1Y2_0988 PF00664 ABC transporter transmembrane region AR1Y2_0989 PF00563 EAL domain AR1Y2_0989 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_0989 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_0993 PF07670 Nucleoside recognition AR1Y2_0993 PF02421 Ferrous iron transport protein B AR1Y2_0993 PF17910 FeoB cytosolic helical domain AR1Y2_0993 PF07664 Ferrous iron transport protein B C terminus AR1Y2_0993 PF04023 FeoA domain AR1Y2_0995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_0995 PF03466 LysR substrate binding domain AR1Y2_1002 PF00258 Flavodoxin AR1Y2_1002 PF00753 Metallo-beta-lactamase superfamily AR1Y2_1003 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AR1Y2_1003 PF02770 Acyl-CoA dehydrogenase, middle domain AR1Y2_1003 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AR1Y2_1005 PF00111 2Fe-2S iron-sulfur cluster binding domain AR1Y2_1005 PF01799 [2Fe-2S] binding domain AR1Y2_1006 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AR1Y2_1006 PF01799 [2Fe-2S] binding domain AR1Y2_1006 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AR1Y2_1007 PF01810 LysE type translocator AR1Y2_1009 PF01791 DeoC/LacD family aldolase AR1Y2_1010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_1010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_1013 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_1014 PF02256 Iron hydrogenase small subunit AR1Y2_1014 PF02906 Iron only hydrogenase large subunit, C-terminal domain AR1Y2_1014 PF12838 4Fe-4S dicluster domain AR1Y2_1017 PF01758 Sodium Bile acid symporter family AR1Y2_1022 PF13407 Periplasmic binding protein domain AR1Y2_1022 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_1023 PF02378 Phosphotransferase system, EIIC AR1Y2_1023 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_1023 PF00367 phosphotransferase system, EIIB AR1Y2_1024 PF08244 Glycosyl hydrolases family 32 C terminal AR1Y2_1024 PF00251 Glycosyl hydrolases family 32 N-terminal domain AR1Y2_1025 PF00294 pfkB family carbohydrate kinase AR1Y2_1027 PF03551 Transcriptional regulator PadR-like family AR1Y2_1031 PF14542 GCN5-related N-acetyl-transferase AR1Y2_1033 PF00561 alpha/beta hydrolase fold AR1Y2_1034 PF04198 Putative sugar-binding domain AR1Y2_1034 PF13936 Helix-turn-helix domain AR1Y2_1035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_1036 PF00248 Aldo/keto reductase family AR1Y2_1037 PF03611 PTS system sugar-specific permease component AR1Y2_1038 PF01791 DeoC/LacD family aldolase AR1Y2_1041 PF13685 Iron-containing alcohol dehydrogenase AR1Y2_1043 PF00239 Resolvase, N terminal domain AR1Y2_1043 PF02796 Helix-turn-helix domain of resolvase AR1Y2_1045 PF01894 Uncharacterised protein family UPF0047 AR1Y2_1046 PF00899 ThiF family AR1Y2_1047 PF03601 Conserved hypothetical protein 698 AR1Y2_1049 PF00005 ABC transporter AR1Y2_1049 PF03466 LysR substrate binding domain AR1Y2_1050 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AR1Y2_1050 PF02770 Acyl-CoA dehydrogenase, middle domain AR1Y2_1050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AR1Y2_1051 PF01012 Electron transfer flavoprotein domain AR1Y2_1052 PF01012 Electron transfer flavoprotein domain AR1Y2_1052 PF00766 Electron transfer flavoprotein FAD-binding domain AR1Y2_1053 PF07690 Major Facilitator Superfamily AR1Y2_1054 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_1056 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_1057 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_1057 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_1058 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1060 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1061 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1065 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1066 PF12706 Beta-lactamase superfamily domain AR1Y2_1068 PF02769 AIR synthase related protein, C-terminal domain AR1Y2_1068 PF00586 AIR synthase related protein, N-terminal domain AR1Y2_1070 PF00266 Aminotransferase class-V AR1Y2_1071 PF00149 Calcineurin-like phosphoesterase AR1Y2_1073 PF01235 Sodium:alanine symporter family AR1Y2_1074 PF01680 SOR/SNZ family AR1Y2_1075 PF01174 SNO glutamine amidotransferase family AR1Y2_1076 PF02545 Maf-like protein AR1Y2_1078 PF00563 EAL domain AR1Y2_1078 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_1078 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_1079 PF06949 Protein of unknown function (DUF1292) AR1Y2_1080 PF00999 Sodium/hydrogen exchanger family AR1Y2_1082 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AR1Y2_1083 PF00586 AIR synthase related protein, N-terminal domain AR1Y2_1083 PF02769 AIR synthase related protein, C-terminal domain AR1Y2_1083 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AR1Y2_1084 PF00923 Transaldolase/Fructose-6-phosphate aldolase AR1Y2_1091 PF08220 DeoR-like helix-turn-helix domain AR1Y2_1091 PF00455 DeoR C terminal sensor domain AR1Y2_1092 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_1093 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_1093 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_1094 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1095 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1100 PF01613 Flavin reductase like domain AR1Y2_1100 PF00301 Rubredoxin AR1Y2_1101 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_1104 PF00294 pfkB family carbohydrate kinase AR1Y2_1105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AR1Y2_1105 PF00205 Thiamine pyrophosphate enzyme, central domain AR1Y2_1105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AR1Y2_1107 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_1111 PF14552 Tautomerase enzyme AR1Y2_1112 PF01012 Electron transfer flavoprotein domain AR1Y2_1113 PF00766 Electron transfer flavoprotein FAD-binding domain AR1Y2_1113 PF01012 Electron transfer flavoprotein domain AR1Y2_1115 PF01144 Coenzyme A transferase AR1Y2_1116 PF00378 Enoyl-CoA hydratase/isomerase AR1Y2_1117 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AR1Y2_1117 PF02770 Acyl-CoA dehydrogenase, middle domain AR1Y2_1117 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AR1Y2_1118 PF01047 MarR family AR1Y2_1119 PF02127 Aminopeptidase I zinc metalloprotease (M18) AR1Y2_1121 PF03063 Prismane/CO dehydrogenase family AR1Y2_1122 PF00005 ABC transporter AR1Y2_1122 PF08402 TOBE domain AR1Y2_1125 PF00266 Aminotransferase class-V AR1Y2_1126 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_1127 PF02535 ZIP Zinc transporter AR1Y2_1128 PF04607 Region found in RelA / SpoT proteins AR1Y2_1128 PF02824 TGS domain AR1Y2_1128 PF13291 ACT domain AR1Y2_1129 PF01842 ACT domain AR1Y2_1129 PF02153 Prephenate dehydrogenase AR1Y2_1130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AR1Y2_1131 PF02638 Glycosyl hydrolase-like 10 AR1Y2_1133 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_1134 PF03611 PTS system sugar-specific permease component AR1Y2_1136 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_1138 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_1139 PF00107 Zinc-binding dehydrogenase AR1Y2_1139 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_1145 PF00474 Sodium:solute symporter family AR1Y2_1146 PF00210 Ferritin-like domain AR1Y2_1148 PF12652 CotJB protein AR1Y2_1149 PF05067 Manganese containing catalase AR1Y2_1152 PF07664 Ferrous iron transport protein B C terminus AR1Y2_1152 PF07670 Nucleoside recognition AR1Y2_1152 PF17910 FeoB cytosolic helical domain AR1Y2_1152 PF02421 Ferrous iron transport protein B AR1Y2_1153 PF12849 PBP superfamily domain AR1Y2_1154 PF02254 TrkA-N domain AR1Y2_1154 PF02080 TrkA-C domain AR1Y2_1155 PF02386 Cation transport protein AR1Y2_1157 PF00694 Aconitase C-terminal domain AR1Y2_1158 PF00330 Aconitase family (aconitate hydratase) AR1Y2_1159 PF00694 Aconitase C-terminal domain AR1Y2_1160 PF00330 Aconitase family (aconitate hydratase) AR1Y2_1162 PF02417 Chromate transporter AR1Y2_1164 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1164 PF03466 LysR substrate binding domain AR1Y2_1172 PF08239 Bacterial SH3 domain AR1Y2_1172 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_1173 PF08386 TAP-like protein AR1Y2_1173 PF00561 alpha/beta hydrolase fold AR1Y2_1175 PF00589 Phage integrase family AR1Y2_1175 PF02920 DNA binding domain of tn916 integrase AR1Y2_1176 PF00571 CBS domain AR1Y2_1176 PF03448 MgtE intracellular N domain AR1Y2_1176 PF01769 Divalent cation transporter AR1Y2_1178 PF01522 Polysaccharide deacetylase AR1Y2_1180 PF18318 Glutamine synthetase C-terminal domain AR1Y2_1180 PF12437 Glutamine synthetase type III N terminal AR1Y2_1180 PF00120 Glutamine synthetase, catalytic domain AR1Y2_1185 PF01548 Transposase AR1Y2_1185 PF02371 Transposase IS116/IS110/IS902 family AR1Y2_1186 PF00107 Zinc-binding dehydrogenase AR1Y2_1186 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1187 PF00834 Ribulose-phosphate 3 epimerase family AR1Y2_1188 PF00834 Ribulose-phosphate 3 epimerase family AR1Y2_1189 PF00083 Sugar (and other) transporter AR1Y2_1190 PF00107 Zinc-binding dehydrogenase AR1Y2_1190 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1191 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_1192 PF00294 pfkB family carbohydrate kinase AR1Y2_1193 PF00248 Aldo/keto reductase family AR1Y2_1194 PF00455 DeoR C terminal sensor domain AR1Y2_1194 PF08220 DeoR-like helix-turn-helix domain AR1Y2_1195 PF00375 Sodium:dicarboxylate symporter family AR1Y2_1196 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AR1Y2_1197 PF01522 Polysaccharide deacetylase AR1Y2_1197 PF00457 Glycosyl hydrolases family 11 AR1Y2_1197 PF03422 Carbohydrate binding module (family 6) AR1Y2_1199 PF01699 Sodium/calcium exchanger protein AR1Y2_1200 PF01926 50S ribosome-binding GTPase AR1Y2_1204 PF13782 Stage V sporulation protein AB AR1Y2_1205 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AR1Y2_1206 PF07451 Stage V sporulation protein AD (SpoVAD) AR1Y2_1207 PF03862 SpoVAC/SpoVAEB sporulation membrane protein AR1Y2_1208 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_1208 PF00912 Transglycosylase AR1Y2_1210 PF09186 Domain of unknown function (DUF1949) AR1Y2_1210 PF01205 Uncharacterized protein family UPF0029 AR1Y2_1211 PF08502 LeuA allosteric (dimerisation) domain AR1Y2_1211 PF00682 HMGL-like AR1Y2_1217 PF12705 PD-(D/E)XK nuclease superfamily AR1Y2_1218 PF12705 PD-(D/E)XK nuclease superfamily AR1Y2_1218 PF00580 UvrD/REP helicase N-terminal domain AR1Y2_1218 PF13361 UvrD-like helicase C-terminal domain AR1Y2_1221 PF01979 Amidohydrolase family AR1Y2_1225 PF05690 Thiazole biosynthesis protein ThiG AR1Y2_1227 PF02581 Thiamine monophosphate synthase AR1Y2_1228 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AR1Y2_1230 PF13091 PLD-like domain AR1Y2_1232 PF01430 Hsp33 protein AR1Y2_1236 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AR1Y2_1239 PF06445 GyrI-like small molecule binding domain AR1Y2_1239 PF12833 Helix-turn-helix domain AR1Y2_1240 PF04539 Sigma-70 region 3 AR1Y2_1240 PF04542 Sigma-70 region 2 AR1Y2_1240 PF04545 Sigma-70, region 4 AR1Y2_1241 PF01464 Transglycosylase SLT domain AR1Y2_1241 PF00497 Bacterial extracellular solute-binding proteins, family 3 AR1Y2_1243 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1243 PF03466 LysR substrate binding domain AR1Y2_1244 PF01717 Cobalamin-independent synthase, Catalytic domain AR1Y2_1245 PF01321 Creatinase/Prolidase N-terminal domain AR1Y2_1245 PF00557 Metallopeptidase family M24 AR1Y2_1246 PF00365 Phosphofructokinase AR1Y2_1247 PF03631 Virulence factor BrkB AR1Y2_1248 PF03123 CAT RNA binding domain AR1Y2_1248 PF00874 PRD domain AR1Y2_1249 PF03610 PTS system fructose IIA component AR1Y2_1249 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1250 PF03609 PTS system sorbose-specific iic component AR1Y2_1251 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_1253 PF01238 Phosphomannose isomerase type I AR1Y2_1254 PF00367 phosphotransferase system, EIIB AR1Y2_1254 PF02378 Phosphotransferase system, EIIC AR1Y2_1254 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_1255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_1255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_1256 PF01081 KDPG and KHG aldolase AR1Y2_1257 PF04794 YdjC-like protein AR1Y2_1258 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_1259 PF03609 PTS system sorbose-specific iic component AR1Y2_1260 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1261 PF03610 PTS system fructose IIA component AR1Y2_1261 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1263 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AR1Y2_1263 PF01409 tRNA synthetases class II core domain (F) AR1Y2_1264 PF01588 Putative tRNA binding domain AR1Y2_1264 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AR1Y2_1264 PF03484 tRNA synthetase B5 domain AR1Y2_1264 PF03147 Ferredoxin-fold anticodon binding domain AR1Y2_1264 PF03483 B3/4 domain AR1Y2_1268 PF02547 Queuosine biosynthesis protein AR1Y2_1269 PF01554 MatE AR1Y2_1271 PF02224 Cytidylate kinase AR1Y2_1272 PF00575 S1 RNA binding domain AR1Y2_1272 PF02401 LytB protein AR1Y2_1273 PF02436 Conserved carboxylase domain AR1Y2_1273 PF00682 HMGL-like AR1Y2_1273 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AR1Y2_1273 PF00364 Biotin-requiring enzyme AR1Y2_1273 PF00289 Biotin carboxylase, N-terminal domain AR1Y2_1273 PF02785 Biotin carboxylase C-terminal domain AR1Y2_1274 PF00574 Clp protease AR1Y2_1276 PF01580 FtsK/SpoIIIE family AR1Y2_1276 PF09397 Ftsk gamma domain AR1Y2_1276 PF01580 FtsK/SpoIIIE family AR1Y2_1276 PF17854 FtsK alpha domain AR1Y2_1276 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AR1Y2_1276 PF09397 Ftsk gamma domain AR1Y2_1276 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AR1Y2_1276 PF17854 FtsK alpha domain AR1Y2_1277 PF01268 Formate--tetrahydrofolate ligase AR1Y2_1278 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AR1Y2_1278 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AR1Y2_1279 PF18693 TRAM domain AR1Y2_1279 PF00919 Uncharacterized protein family UPF0004 AR1Y2_1279 PF04055 Radical SAM superfamily AR1Y2_1280 PF01066 CDP-alcohol phosphatidyltransferase AR1Y2_1281 PF00994 Probable molybdopterin binding domain AR1Y2_1281 PF02464 Competence-damaged protein AR1Y2_1281 PF18146 Damage-inducible protein CinA KH domain AR1Y2_1283 PF02631 RecX family AR1Y2_1286 PF12848 ABC transporter AR1Y2_1286 PF00005 ABC transporter AR1Y2_1287 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AR1Y2_1288 PF02881 SRP54-type protein, helical bundle domain AR1Y2_1288 PF02978 Signal peptide binding domain AR1Y2_1288 PF00448 SRP54-type protein, GTPase domain AR1Y2_1289 PF00886 Ribosomal protein S16 AR1Y2_1291 PF03372 Endonuclease/Exonuclease/phosphatase family AR1Y2_1294 PF03600 Citrate transporter AR1Y2_1295 PF03600 Citrate transporter AR1Y2_1299 PF02664 S-Ribosylhomocysteinase (LuxS) AR1Y2_1305 PF03610 PTS system fructose IIA component AR1Y2_1305 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1307 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_1309 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1311 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_1312 PF00107 Zinc-binding dehydrogenase AR1Y2_1312 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1314 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_1314 PF07702 UTRA domain AR1Y2_1315 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_1315 PF07702 UTRA domain AR1Y2_1317 PF00107 Zinc-binding dehydrogenase AR1Y2_1317 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1318 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_1321 PF00589 Phage integrase family AR1Y2_1321 PF02899 Phage integrase, N-terminal SAM-like domain AR1Y2_1323 PF03123 CAT RNA binding domain AR1Y2_1323 PF00874 PRD domain AR1Y2_1324 PF02378 Phosphotransferase system, EIIC AR1Y2_1324 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_1324 PF00367 phosphotransferase system, EIIB AR1Y2_1325 PF02378 Phosphotransferase system, EIIC AR1Y2_1325 PF00367 phosphotransferase system, EIIB AR1Y2_1326 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AR1Y2_1327 PF01979 Amidohydrolase family AR1Y2_1329 PF08239 Bacterial SH3 domain AR1Y2_1329 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_1333 PF02690 Na+/Pi-cotransporter AR1Y2_1334 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AR1Y2_1334 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AR1Y2_1335 PF00162 Phosphoglycerate kinase AR1Y2_1336 PF00121 Triosephosphate isomerase AR1Y2_1339 PF01676 Metalloenzyme superfamily AR1Y2_1339 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AR1Y2_1340 PF03952 Enolase, N-terminal domain AR1Y2_1340 PF00113 Enolase, C-terminal TIM barrel domain AR1Y2_1343 PF17876 Cold shock domain AR1Y2_1343 PF00773 RNB domain AR1Y2_1343 PF00575 S1 RNA binding domain AR1Y2_1343 PF08206 Ribonuclease B OB domain AR1Y2_1344 PF01668 SmpB protein AR1Y2_1345 PF08239 Bacterial SH3 domain AR1Y2_1345 PF01183 Glycosyl hydrolases family 25 AR1Y2_1348 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AR1Y2_1348 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1348 PF00072 Response regulator receiver domain AR1Y2_1348 PF01627 Hpt domain AR1Y2_1348 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1348 PF00672 HAMP domain AR1Y2_1358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1358 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1361 PF00005 ABC transporter AR1Y2_1362 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1362 PF00072 Response regulator receiver domain AR1Y2_1364 PF01782 RimM N-terminal domain AR1Y2_1364 PF05239 PRC-barrel domain AR1Y2_1365 PF01746 tRNA (Guanine-1)-methyltransferase AR1Y2_1366 PF01245 Ribosomal protein L19 AR1Y2_1367 PF10502 Signal peptidase, peptidase S26 AR1Y2_1368 PF01926 50S ribosome-binding GTPase AR1Y2_1369 PF10502 Signal peptidase, peptidase S26 AR1Y2_1370 PF01351 Ribonuclease HII AR1Y2_1371 PF02021 Uncharacterised protein family UPF0102 AR1Y2_1373 PF01926 50S ribosome-binding GTPase AR1Y2_1373 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AR1Y2_1375 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AR1Y2_1375 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AR1Y2_1376 PF12897 Alanine-glyoxylate amino-transferase AR1Y2_1377 PF01554 MatE AR1Y2_1379 PF01678 Diaminopimelate epimerase AR1Y2_1380 PF01225 Mur ligase family, catalytic domain AR1Y2_1380 PF02875 Mur ligase family, glutamate ligase domain AR1Y2_1380 PF08245 Mur ligase middle domain AR1Y2_1381 PF08501 Shikimate dehydrogenase substrate binding domain AR1Y2_1381 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AR1Y2_1383 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AR1Y2_1383 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AR1Y2_1384 PF04607 Region found in RelA / SpoT proteins AR1Y2_1385 PF01189 16S rRNA methyltransferase RsmB/F AR1Y2_1385 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AR1Y2_1385 PF17126 RsmF rRNA methyltransferase first C-terminal domain AR1Y2_1386 PF01479 S4 domain AR1Y2_1386 PF00849 RNA pseudouridylate synthase AR1Y2_1387 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_1388 PF00106 short chain dehydrogenase AR1Y2_1389 PF01479 S4 domain AR1Y2_1389 PF00849 RNA pseudouridylate synthase AR1Y2_1390 PF03838 Recombination protein U AR1Y2_1391 PF08340 Domain of unknown function (DUF1732) AR1Y2_1391 PF03755 YicC-like family, N-terminal region AR1Y2_1392 PF00625 Guanylate kinase AR1Y2_1393 PF01192 RNA polymerase Rpb6 AR1Y2_1394 PF02673 Bacitracin resistance protein BacA AR1Y2_1395 PF04545 Sigma-70, region 4 AR1Y2_1395 PF04539 Sigma-70 region 3 AR1Y2_1395 PF04542 Sigma-70 region 2 AR1Y2_1395 PF00140 Sigma-70 factor, region 1.2 AR1Y2_1395 PF03979 Sigma-70 factor, region 1.1 AR1Y2_1396 PF01966 HD domain AR1Y2_1396 PF13286 Phosphohydrolase-associated domain AR1Y2_1397 PF08275 DNA primase catalytic core, N-terminal domain AR1Y2_1397 PF10410 DnaB-helicase binding domain of primase AR1Y2_1397 PF01807 CHC2 zinc finger AR1Y2_1398 PF04545 Sigma-70, region 4 AR1Y2_1398 PF04539 Sigma-70 region 3 AR1Y2_1398 PF04542 Sigma-70 region 2 AR1Y2_1398 PF00140 Sigma-70 factor, region 1.2 AR1Y2_1398 PF03979 Sigma-70 factor, region 1.1 AR1Y2_1399 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AR1Y2_1400 PF01784 NIF3 (NGG1p interacting factor 3) AR1Y2_1401 PF00485 Phosphoribulokinase / Uridine kinase family AR1Y2_1403 PF01471 Putative peptidoglycan binding domain AR1Y2_1403 PF07486 Cell Wall Hydrolase AR1Y2_1406 PF00005 ABC transporter AR1Y2_1406 PF08402 TOBE domain AR1Y2_1408 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1408 PF03466 LysR substrate binding domain AR1Y2_1409 PF01381 Helix-turn-helix AR1Y2_1411 PF04055 Radical SAM superfamily AR1Y2_1412 PF01227 GTP cyclohydrolase I AR1Y2_1413 PF06508 Queuosine biosynthesis protein QueC AR1Y2_1414 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_1415 PF04898 Glutamate synthase central domain AR1Y2_1415 PF00310 Glutamine amidotransferases class-II AR1Y2_1415 PF01645 Conserved region in glutamate synthase AR1Y2_1415 PF01493 GXGXG motif AR1Y2_1416 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AR1Y2_1416 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_1422 PF00072 Response regulator receiver domain AR1Y2_1422 PF04397 LytTr DNA-binding domain AR1Y2_1423 PF01594 AI-2E family transporter AR1Y2_1425 PF08220 DeoR-like helix-turn-helix domain AR1Y2_1425 PF00455 DeoR C terminal sensor domain AR1Y2_1427 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1428 PF02901 Pyruvate formate lyase-like AR1Y2_1428 PF01228 Glycine radical AR1Y2_1429 PF04055 Radical SAM superfamily AR1Y2_1429 PF13187 4Fe-4S dicluster domain AR1Y2_1430 PF03609 PTS system sorbose-specific iic component AR1Y2_1432 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AR1Y2_1432 PF00205 Thiamine pyrophosphate enzyme, central domain AR1Y2_1432 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AR1Y2_1433 PF02082 Transcriptional regulator AR1Y2_1434 PF01554 MatE AR1Y2_1435 PF00291 Pyridoxal-phosphate dependent enzyme AR1Y2_1436 PF00476 DNA polymerase family A AR1Y2_1436 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AR1Y2_1436 PF01367 5'-3' exonuclease, C-terminal SAM fold AR1Y2_1437 PF01121 Dephospho-CoA kinase AR1Y2_1438 PF00583 Acetyltransferase (GNAT) family AR1Y2_1438 PF14268 YoaP-like AR1Y2_1439 PF11738 Protein of unknown function (DUF3298) AR1Y2_1439 PF13739 Deacetylase PdaC AR1Y2_1440 PF08281 Sigma-70, region 4 AR1Y2_1440 PF04542 Sigma-70 region 2 AR1Y2_1441 PF00753 Metallo-beta-lactamase superfamily AR1Y2_1443 PF05167 Uncharacterised ACR (DUF711) AR1Y2_1444 PF01546 Peptidase family M20/M25/M40 AR1Y2_1444 PF07687 Peptidase dimerisation domain AR1Y2_1445 PF00579 tRNA synthetases class I (W and Y) AR1Y2_1445 PF01479 S4 domain AR1Y2_1450 PF00226 DnaJ domain AR1Y2_1450 PF01556 DnaJ C terminal domain AR1Y2_1450 PF00684 DnaJ central domain AR1Y2_1451 PF00012 Hsp70 protein AR1Y2_1458 PF18106 Rolling Circle replication initiation protein N-terminal domain AR1Y2_1458 PF02486 Replication initiation factor AR1Y2_1497 PF13936 Helix-turn-helix domain AR1Y2_1498 PF01628 HrcA protein C terminal domain AR1Y2_1499 PF01025 GrpE AR1Y2_1500 PF00012 Hsp70 protein AR1Y2_1501 PF00684 DnaJ central domain AR1Y2_1501 PF00226 DnaJ domain AR1Y2_1501 PF01556 DnaJ C terminal domain AR1Y2_1502 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_1502 PF02378 Phosphotransferase system, EIIC AR1Y2_1502 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_1504 PF17179 4Fe-4S dicluster domain AR1Y2_1505 PF00175 Oxidoreductase NAD-binding domain AR1Y2_1505 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AR1Y2_1506 PF13187 4Fe-4S dicluster domain AR1Y2_1506 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AR1Y2_1506 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AR1Y2_1507 PF12833 Helix-turn-helix domain AR1Y2_1507 PF02311 AraC-like ligand binding domain AR1Y2_1508 PF00999 Sodium/hydrogen exchanger family AR1Y2_1508 PF03471 Transporter associated domain AR1Y2_1508 PF02080 TrkA-C domain AR1Y2_1511 PF04452 RNA methyltransferase AR1Y2_1512 PF00266 Aminotransferase class-V AR1Y2_1513 PF02568 Thiamine biosynthesis protein (ThiI) AR1Y2_1513 PF02926 THUMP domain AR1Y2_1515 PF04055 Radical SAM superfamily AR1Y2_1515 PF01938 TRAM domain AR1Y2_1515 PF00919 Uncharacterized protein family UPF0004 AR1Y2_1516 PF06135 IreB regulatory phosphoprotein AR1Y2_1517 PF03652 Holliday junction resolvase AR1Y2_1519 PF01475 Ferric uptake regulator family AR1Y2_1520 PF00753 Metallo-beta-lactamase superfamily AR1Y2_1520 PF17770 Ribonuclease J C-terminal domain AR1Y2_1520 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AR1Y2_1526 PF02567 Phenazine biosynthesis-like protein AR1Y2_1527 PF03466 LysR substrate binding domain AR1Y2_1527 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1528 PF03109 ABC1 family AR1Y2_1530 PF17932 Tetracyclin repressor-like, C-terminal domain AR1Y2_1530 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_1532 PF00293 NUDIX domain AR1Y2_1532 PF13344 Haloacid dehalogenase-like hydrolase AR1Y2_1533 PF00072 Response regulator receiver domain AR1Y2_1533 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1534 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1534 PF00672 HAMP domain AR1Y2_1534 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1536 PF02557 D-alanyl-D-alanine carboxypeptidase AR1Y2_1540 PF04545 Sigma-70, region 4 AR1Y2_1540 PF04542 Sigma-70 region 2 AR1Y2_1543 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AR1Y2_1544 PF01381 Helix-turn-helix AR1Y2_1545 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_1545 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AR1Y2_1546 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1546 PF03466 LysR substrate binding domain AR1Y2_1547 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AR1Y2_1547 PF08501 Shikimate dehydrogenase substrate binding domain AR1Y2_1548 PF07690 Major Facilitator Superfamily AR1Y2_1549 PF01487 Type I 3-dehydroquinase AR1Y2_1550 PF03466 LysR substrate binding domain AR1Y2_1550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1553 PF07690 Major Facilitator Superfamily AR1Y2_1555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AR1Y2_1556 PF03480 Bacterial extracellular solute-binding protein, family 7 AR1Y2_1557 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AR1Y2_1557 PF08501 Shikimate dehydrogenase substrate binding domain AR1Y2_1558 PF02311 AraC-like ligand binding domain AR1Y2_1558 PF12833 Helix-turn-helix domain AR1Y2_1559 PF07690 Major Facilitator Superfamily AR1Y2_1560 PF01144 Coenzyme A transferase AR1Y2_1561 PF01575 MaoC like domain AR1Y2_1562 PF02558 Ketopantoate reductase PanE/ApbA AR1Y2_1562 PF08546 Ketopantoate reductase PanE/ApbA C terminal AR1Y2_1564 PF01220 Dehydroquinase class II AR1Y2_1568 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AR1Y2_1568 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_1569 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_1569 PF03466 LysR substrate binding domain AR1Y2_1570 PF01202 Shikimate kinase AR1Y2_1571 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_1572 PF08207 Elongation factor P (EF-P) KOW-like domain AR1Y2_1572 PF01132 Elongation factor P (EF-P) OB domain AR1Y2_1572 PF09285 Elongation factor P, C-terminal AR1Y2_1577 PF06686 Stage III sporulation protein AC/AD protein family AR1Y2_1582 PF03780 Asp23 family, cell envelope-related function AR1Y2_1583 PF01029 NusB family AR1Y2_1584 PF13742 OB-fold nucleic acid binding domain AR1Y2_1584 PF02601 Exonuclease VII, large subunit AR1Y2_1585 PF02609 Exonuclease VII small subunit AR1Y2_1586 PF00348 Polyprenyl synthetase AR1Y2_1587 PF02779 Transketolase, pyrimidine binding domain AR1Y2_1587 PF02780 Transketolase, C-terminal domain AR1Y2_1587 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AR1Y2_1588 PF01479 S4 domain AR1Y2_1588 PF01728 FtsJ-like methyltransferase AR1Y2_1589 PF01513 ATP-NAD kinase AR1Y2_1590 PF01316 Arginine repressor, DNA binding domain AR1Y2_1590 PF02863 Arginine repressor, C-terminal domain AR1Y2_1591 PF13476 AAA domain AR1Y2_1592 PF05580 SpoIVB peptidase S55 AR1Y2_1592 PF17820 PDZ domain AR1Y2_1593 PF08769 Sporulation initiation factor Spo0A C terminal AR1Y2_1593 PF00072 Response regulator receiver domain AR1Y2_1594 PF08769 Sporulation initiation factor Spo0A C terminal AR1Y2_1594 PF00072 Response regulator receiver domain AR1Y2_1598 PF01634 ATP phosphoribosyltransferase AR1Y2_1599 PF00815 Histidinol dehydrogenase AR1Y2_1600 PF00475 Imidazoleglycerol-phosphate dehydratase AR1Y2_1601 PF01502 Phosphoribosyl-AMP cyclohydrolase AR1Y2_1601 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AR1Y2_1603 PF02272 DHHA1 domain AR1Y2_1603 PF01411 tRNA synthetases class II (A) AR1Y2_1603 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AR1Y2_1607 PF01165 Ribosomal protein S21 AR1Y2_1610 PF02562 PhoH-like protein AR1Y2_1611 PF02130 Uncharacterized protein family UPF0054 AR1Y2_1617 PF01676 Metalloenzyme superfamily AR1Y2_1620 PF03477 ATP cone domain AR1Y2_1620 PF13597 Anaerobic ribonucleoside-triphosphate reductase AR1Y2_1622 PF00696 Amino acid kinase family AR1Y2_1622 PF01472 PUA domain AR1Y2_1623 PF05979 Bacterial protein of unknown function (DUF896) AR1Y2_1624 PF00171 Aldehyde dehydrogenase family AR1Y2_1625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AR1Y2_1625 PF13237 4Fe-4S dicluster domain AR1Y2_1625 PF13375 RnfC Barrel sandwich hybrid domain AR1Y2_1625 PF10531 SLBB domain AR1Y2_1626 PF03116 NQR2, RnfD, RnfE family AR1Y2_1627 PF04205 FMN-binding domain AR1Y2_1628 PF02508 Rnf-Nqr subunit, membrane protein AR1Y2_1629 PF02508 Rnf-Nqr subunit, membrane protein AR1Y2_1630 PF04060 Putative Fe-S cluster AR1Y2_1631 PF05239 PRC-barrel domain AR1Y2_1633 PF03477 ATP cone domain AR1Y2_1634 PF01078 Magnesium chelatase, subunit ChlI AR1Y2_1634 PF13335 Magnesium chelatase, subunit ChlI C-terminal AR1Y2_1635 PF02481 DNA recombination-mediator protein A AR1Y2_1635 PF17782 DprA winged helix domain AR1Y2_1636 PF01396 Topoisomerase DNA binding C4 zinc finger AR1Y2_1636 PF01131 DNA topoisomerase AR1Y2_1636 PF01751 Toprim domain AR1Y2_1637 PF06018 CodY GAF-like domain AR1Y2_1637 PF08222 CodY helix-turn-helix domain AR1Y2_1639 PF00318 Ribosomal protein S2 AR1Y2_1641 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_1641 PF07729 FCD domain AR1Y2_1642 PF00563 EAL domain AR1Y2_1642 PF12792 CSS motif domain associated with EAL AR1Y2_1643 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1643 PF00072 Response regulator receiver domain AR1Y2_1643 PF09308 LuxQ, periplasmic AR1Y2_1643 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1649 PF00817 impB/mucB/samB family AR1Y2_1649 PF11798 IMS family HHH motif AR1Y2_1649 PF11799 impB/mucB/samB family C-terminal domain AR1Y2_1650 PF02661 Fic/DOC family AR1Y2_1650 PF12728 Helix-turn-helix domain AR1Y2_1655 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1655 PF00072 Response regulator receiver domain AR1Y2_1656 PF00005 ABC transporter AR1Y2_1657 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1657 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1661 PF00291 Pyridoxal-phosphate dependent enzyme AR1Y2_1664 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1664 PF00072 Response regulator receiver domain AR1Y2_1665 PF00672 HAMP domain AR1Y2_1665 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1666 PF00005 ABC transporter AR1Y2_1670 PF01209 ubiE/COQ5 methyltransferase family AR1Y2_1672 PF01381 Helix-turn-helix AR1Y2_1673 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_1673 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AR1Y2_1675 PF02361 Cobalt transport protein AR1Y2_1676 PF00005 ABC transporter AR1Y2_1677 PF00005 ABC transporter AR1Y2_1678 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AR1Y2_1679 PF00294 pfkB family carbohydrate kinase AR1Y2_1680 PF01156 Inosine-uridine preferring nucleoside hydrolase AR1Y2_1682 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_1683 PF00294 pfkB family carbohydrate kinase AR1Y2_1684 PF01156 Inosine-uridine preferring nucleoside hydrolase AR1Y2_1686 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_1687 PF00005 ABC transporter AR1Y2_1690 PF12833 Helix-turn-helix domain AR1Y2_1691 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AR1Y2_1693 PF04055 Radical SAM superfamily AR1Y2_1694 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AR1Y2_1696 PF00857 Isochorismatase family AR1Y2_1698 PF00072 Response regulator receiver domain AR1Y2_1700 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AR1Y2_1700 PF00072 Response regulator receiver domain AR1Y2_1700 PF01627 Hpt domain AR1Y2_1700 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1700 PF00672 HAMP domain AR1Y2_1702 PF13732 Domain of unknown function (DUF4162) AR1Y2_1702 PF00005 ABC transporter AR1Y2_1703 PF08279 HTH domain AR1Y2_1703 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_1703 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_1703 PF00874 PRD domain AR1Y2_1703 PF05043 Mga helix-turn-helix domain AR1Y2_1705 PF01232 Mannitol dehydrogenase Rossmann domain AR1Y2_1705 PF08125 Mannitol dehydrogenase C-terminal domain AR1Y2_1706 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AR1Y2_1707 PF01380 SIS domain AR1Y2_1708 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_1712 PF00072 Response regulator receiver domain AR1Y2_1712 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1713 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1713 PF00989 PAS fold AR1Y2_1713 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1713 PF16736 Single Cache-like AR1Y2_1714 PF00005 ABC transporter AR1Y2_1714 PF02687 FtsX-like permease family AR1Y2_1714 PF12704 MacB-like periplasmic core domain AR1Y2_1720 PF01416 tRNA pseudouridine synthase AR1Y2_1722 PF01590 GAF domain AR1Y2_1722 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_1722 PF00563 EAL domain AR1Y2_1722 PF00360 Phytochrome region AR1Y2_1727 PF04070 Domain of unknown function (DUF378) AR1Y2_1732 PF01751 Toprim domain AR1Y2_1732 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1732 PF00204 DNA gyrase B AR1Y2_1732 PF00986 DNA gyrase B subunit, carboxyl terminus AR1Y2_1733 PF00521 DNA gyrase/topoisomerase IV, subunit A AR1Y2_1733 PF03989 DNA gyrase C-terminal domain, beta-propeller AR1Y2_1734 PF00535 Glycosyl transferase family 2 AR1Y2_1735 PF03816 Cell envelope-related transcriptional attenuator domain AR1Y2_1736 PF03816 Cell envelope-related transcriptional attenuator domain AR1Y2_1737 PF01842 ACT domain AR1Y2_1737 PF10369 Small subunit of acetolactate synthase AR1Y2_1738 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AR1Y2_1738 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AR1Y2_1740 PF13411 MerR HTH family regulatory protein AR1Y2_1740 PF06445 GyrI-like small molecule binding domain AR1Y2_1742 PF08220 DeoR-like helix-turn-helix domain AR1Y2_1742 PF00455 DeoR C terminal sensor domain AR1Y2_1743 PF03610 PTS system fructose IIA component AR1Y2_1743 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1744 PF03830 PTS system sorbose subfamily IIB component AR1Y2_1746 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_1747 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1747 PF00107 Zinc-binding dehydrogenase AR1Y2_1748 PF00455 DeoR C terminal sensor domain AR1Y2_1748 PF08220 DeoR-like helix-turn-helix domain AR1Y2_1749 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_1751 PF03952 Enolase, N-terminal domain AR1Y2_1751 PF00113 Enolase, C-terminal TIM barrel domain AR1Y2_1752 PF00171 Aldehyde dehydrogenase family AR1Y2_1754 PF01171 PP-loop family AR1Y2_1755 PF00356 Bacterial regulatory proteins, lacI family AR1Y2_1761 PF00005 ABC transporter AR1Y2_1762 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1762 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1763 PF00072 Response regulator receiver domain AR1Y2_1763 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1771 PF01066 CDP-alcohol phosphatidyltransferase AR1Y2_1772 PF02899 Phage integrase, N-terminal SAM-like domain AR1Y2_1772 PF00589 Phage integrase family AR1Y2_1773 PF00689 Cation transporting ATPase, C-terminus AR1Y2_1773 PF00690 Cation transporter/ATPase, N-terminus AR1Y2_1774 PF01070 FMN-dependent dehydrogenase AR1Y2_1775 PF01554 MatE AR1Y2_1778 PF01554 MatE AR1Y2_1779 PF16916 Dimerisation domain of Zinc Transporter AR1Y2_1779 PF01545 Cation efflux family AR1Y2_1782 PF00005 ABC transporter AR1Y2_1787 PF06574 FAD synthetase AR1Y2_1787 PF01687 Riboflavin kinase AR1Y2_1788 PF01509 TruB family pseudouridylate synthase (N terminal domain) AR1Y2_1788 PF16198 tRNA pseudouridylate synthase B C-terminal domain AR1Y2_1789 PF01368 DHH family AR1Y2_1789 PF02272 DHHA1 domain AR1Y2_1790 PF02033 Ribosome-binding factor A AR1Y2_1791 PF11987 Translation-initiation factor 2 AR1Y2_1791 PF00009 Elongation factor Tu GTP binding domain AR1Y2_1791 PF04760 Translation initiation factor IF-2, N-terminal region AR1Y2_1793 PF04296 Protein of unknown function (DUF448) AR1Y2_1794 PF08529 NusA N-terminal domain AR1Y2_1794 PF00575 S1 RNA binding domain AR1Y2_1794 PF13184 NusA-like KH domain AR1Y2_1795 PF17384 RimP C-terminal SH3 domain AR1Y2_1795 PF02576 RimP N-terminal domain AR1Y2_1796 PF00580 UvrD/REP helicase N-terminal domain AR1Y2_1796 PF13361 UvrD-like helicase C-terminal domain AR1Y2_1798 PF00950 ABC 3 transport family AR1Y2_1799 PF00005 ABC transporter AR1Y2_1800 PF01297 Zinc-uptake complex component A periplasmic AR1Y2_1802 PF10437 Bacterial lipoate protein ligase C-terminus AR1Y2_1802 PF03099 Biotin/lipoate A/B protein ligase family AR1Y2_1804 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain AR1Y2_1804 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain AR1Y2_1805 PF00381 PTS HPr component phosphorylation site AR1Y2_1806 PF03611 PTS system sugar-specific permease component AR1Y2_1808 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_1809 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_1809 PF00107 Zinc-binding dehydrogenase AR1Y2_1810 PF00364 Biotin-requiring enzyme AR1Y2_1810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AR1Y2_1810 PF02817 e3 binding domain AR1Y2_1811 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AR1Y2_1811 PF00364 Biotin-requiring enzyme AR1Y2_1811 PF02817 e3 binding domain AR1Y2_1812 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_1812 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AR1Y2_1813 PF02780 Transketolase, C-terminal domain AR1Y2_1813 PF02779 Transketolase, pyrimidine binding domain AR1Y2_1814 PF00676 Dehydrogenase E1 component AR1Y2_1816 PF02583 Metal-sensitive transcriptional repressor AR1Y2_1817 PF00403 Heavy-metal-associated domain AR1Y2_1818 PF01966 HD domain AR1Y2_1819 PF11490 DNA polymerase III polC-type N-terminus II AR1Y2_1819 PF00929 Exonuclease AR1Y2_1819 PF02811 PHP domain AR1Y2_1819 PF14579 Helix-hairpin-helix motif AR1Y2_1819 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AR1Y2_1819 PF07733 Bacterial DNA polymerase III alpha NTPase domain AR1Y2_1820 PF04551 GcpE protein AR1Y2_1821 PF17820 PDZ domain AR1Y2_1821 PF02163 Peptidase family M50 AR1Y2_1822 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AR1Y2_1822 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AR1Y2_1822 PF13288 DXP reductoisomerase C-terminal domain AR1Y2_1824 PF01255 Putative undecaprenyl diphosphate synthase AR1Y2_1825 PF01765 Ribosome recycling factor AR1Y2_1826 PF00696 Amino acid kinase family AR1Y2_1827 PF02580 D-Tyr-tRNA(Tyr) deacylase AR1Y2_1828 PF01979 Amidohydrolase family AR1Y2_1829 PF01048 Phosphorylase superfamily AR1Y2_1833 PF00301 Rubredoxin AR1Y2_1833 PF00753 Metallo-beta-lactamase superfamily AR1Y2_1833 PF00258 Flavodoxin AR1Y2_1834 PF06463 Molybdenum Cofactor Synthesis C AR1Y2_1834 PF04055 Radical SAM superfamily AR1Y2_1835 PF00171 Aldehyde dehydrogenase family AR1Y2_1837 PF01813 ATP synthase subunit D AR1Y2_1838 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_1838 PF02874 ATP synthase alpha/beta family, beta-barrel domain AR1Y2_1839 PF02874 ATP synthase alpha/beta family, beta-barrel domain AR1Y2_1839 PF16886 ATPsynthase alpha/beta subunit N-term extension AR1Y2_1839 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_1843 PF01496 V-type ATPase 116kDa subunit family AR1Y2_1847 PF00075 RNase H AR1Y2_1853 PF01891 Cobalt uptake substrate-specific transmembrane region AR1Y2_1855 PF02361 Cobalt transport protein AR1Y2_1856 PF00005 ABC transporter AR1Y2_1858 PF00005 ABC transporter AR1Y2_1861 PF12833 Helix-turn-helix domain AR1Y2_1862 PF13538 UvrD-like helicase C-terminal domain AR1Y2_1865 PF02687 FtsX-like permease family AR1Y2_1865 PF12704 MacB-like periplasmic core domain AR1Y2_1865 PF00005 ABC transporter AR1Y2_1866 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_1866 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_1867 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_1867 PF00072 Response regulator receiver domain AR1Y2_1868 PF12008 Type I restriction and modification enzyme - subunit R C terminal AR1Y2_1868 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AR1Y2_1868 PF18766 SWI2/SNF2 ATPase AR1Y2_1869 PF01420 Type I restriction modification DNA specificity domain AR1Y2_1870 PF12161 HsdM N-terminal domain AR1Y2_1870 PF02384 N-6 DNA Methylase AR1Y2_1872 PF02661 Fic/DOC family AR1Y2_1872 PF12728 Helix-turn-helix domain AR1Y2_1877 PF01554 MatE AR1Y2_1878 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_1878 PF17932 Tetracyclin repressor-like, C-terminal domain AR1Y2_1881 PF01554 MatE AR1Y2_1882 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_1887 PF01381 Helix-turn-helix AR1Y2_1888 PF00186 Dihydrofolate reductase AR1Y2_1890 PF01872 RibD C-terminal domain AR1Y2_1891 PF18106 Rolling Circle replication initiation protein N-terminal domain AR1Y2_1891 PF02486 Replication initiation factor AR1Y2_1895 PF02570 Precorrin-8X methylmutase AR1Y2_1896 PF07685 CobB/CobQ-like glutamine amidotransferase domain AR1Y2_1896 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AR1Y2_1897 PF00155 Aminotransferase class I and II AR1Y2_1898 PF03186 CobD/Cbib protein AR1Y2_1901 PF02654 Cobalamin-5-phosphate synthase AR1Y2_1904 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AR1Y2_1904 PF07685 CobB/CobQ-like glutamine amidotransferase domain AR1Y2_1905 PF02571 Precorrin-6x reductase CbiJ/CobK AR1Y2_1906 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AR1Y2_1907 PF01890 Cobalamin synthesis G C-terminus AR1Y2_1907 PF11761 Cobalamin biosynthesis central region AR1Y2_1907 PF11760 Cobalamin synthesis G N-terminal AR1Y2_1908 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AR1Y2_1909 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AR1Y2_1911 PF00202 Aminotransferase class-III AR1Y2_1912 PF00490 Delta-aminolevulinic acid dehydratase AR1Y2_1913 PF03900 Porphobilinogen deaminase, C-terminal domain AR1Y2_1913 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AR1Y2_1915 PF01488 Shikimate / quinate 5-dehydrogenase AR1Y2_1915 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AR1Y2_1915 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AR1Y2_1917 PF00563 EAL domain AR1Y2_1917 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_1917 PF13426 PAS domain AR1Y2_1921 PF00132 Bacterial transferase hexapeptide (six repeats) AR1Y2_1922 PF00403 Heavy-metal-associated domain AR1Y2_1923 PF00403 Heavy-metal-associated domain AR1Y2_1924 PF01022 Bacterial regulatory protein, arsR family AR1Y2_1926 PF01965 DJ-1/PfpI family AR1Y2_1933 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1934 PF01261 Xylose isomerase-like TIM barrel AR1Y2_1935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_1935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_1937 PF08448 PAS fold AR1Y2_1937 PF08447 PAS fold AR1Y2_1937 PF05231 MASE1 AR1Y2_1937 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_1937 PF13426 PAS domain AR1Y2_1937 PF00563 EAL domain AR1Y2_1939 PF02256 Iron hydrogenase small subunit AR1Y2_1939 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AR1Y2_1939 PF00037 4Fe-4S binding domain AR1Y2_1939 PF02906 Iron only hydrogenase large subunit, C-terminal domain AR1Y2_1940 PF00037 4Fe-4S binding domain AR1Y2_1940 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AR1Y2_1940 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AR1Y2_1942 PF03575 Peptidase family S51 AR1Y2_1950 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_1950 PF18665 Tetracyclin repressor-like, C-terminal domain AR1Y2_1951 PF01554 MatE AR1Y2_1955 PF00072 Response regulator receiver domain AR1Y2_1955 PF01966 HD domain AR1Y2_1957 PF00132 Bacterial transferase hexapeptide (six repeats) AR1Y2_1957 PF12804 MobA-like NTP transferase domain AR1Y2_1958 PF01131 DNA topoisomerase AR1Y2_1958 PF01751 Toprim domain AR1Y2_1960 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_1964 PF00464 Serine hydroxymethyltransferase AR1Y2_1965 PF13840 ACT domain AR1Y2_1965 PF00696 Amino acid kinase family AR1Y2_1965 PF01842 ACT domain AR1Y2_1966 PF00152 tRNA synthetases class II (D, K and N) AR1Y2_1966 PF02938 GAD domain AR1Y2_1966 PF01336 OB-fold nucleic acid binding domain AR1Y2_1968 PF01565 FAD binding domain AR1Y2_1968 PF02913 FAD linked oxidases, C-terminal domain AR1Y2_1969 PF01012 Electron transfer flavoprotein domain AR1Y2_1969 PF00766 Electron transfer flavoprotein FAD-binding domain AR1Y2_1970 PF01012 Electron transfer flavoprotein domain AR1Y2_1971 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_1971 PF07729 FCD domain AR1Y2_1972 PF13847 Methyltransferase domain AR1Y2_1976 PF00766 Electron transfer flavoprotein FAD-binding domain AR1Y2_1976 PF01012 Electron transfer flavoprotein domain AR1Y2_1977 PF01012 Electron transfer flavoprotein domain AR1Y2_1978 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AR1Y2_1978 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AR1Y2_1978 PF02770 Acyl-CoA dehydrogenase, middle domain AR1Y2_1979 PF02913 FAD linked oxidases, C-terminal domain AR1Y2_1979 PF01565 FAD binding domain AR1Y2_1980 PF09861 Lactate racemase N-terminal domain AR1Y2_1981 PF02652 L-lactate permease AR1Y2_1982 PF13393 Histidyl-tRNA synthetase AR1Y2_1982 PF03129 Anticodon binding domain AR1Y2_1984 PF04055 Radical SAM superfamily AR1Y2_1985 PF00753 Metallo-beta-lactamase superfamily AR1Y2_1986 PF13291 ACT domain AR1Y2_1986 PF02824 TGS domain AR1Y2_1986 PF04607 Region found in RelA / SpoT proteins AR1Y2_1987 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AR1Y2_1987 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AR1Y2_1988 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AR1Y2_1988 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AR1Y2_1990 PF02590 Predicted SPOUT methyltransferase AR1Y2_1992 PF14245 Type IV pilin PilA AR1Y2_1992 PF07963 Prokaryotic N-terminal methylation motif AR1Y2_1993 PF10518 TAT (twin-arginine translocation) pathway signal sequence AR1Y2_1993 PF00149 Calcineurin-like phosphoesterase AR1Y2_1996 PF00437 Type II/IV secretion system protein AR1Y2_1997 PF00437 Type II/IV secretion system protein AR1Y2_2000 PF00482 Type II secretion system (T2SS), protein F AR1Y2_2001 PF01478 Type IV leader peptidase family AR1Y2_2001 PF06750 Bacterial Peptidase A24 N-terminal domain AR1Y2_2010 PF13411 MerR HTH family regulatory protein AR1Y2_2011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2011 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2013 PF00005 ABC transporter AR1Y2_2014 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2014 PF00072 Response regulator receiver domain AR1Y2_2015 PF02590 Predicted SPOUT methyltransferase AR1Y2_2016 PF04073 Aminoacyl-tRNA editing domain AR1Y2_2017 PF04298 Putative neutral zinc metallopeptidase AR1Y2_2019 PF01709 Transcriptional regulator AR1Y2_2020 PF01595 Cyclin M transmembrane N-terminal domain AR1Y2_2020 PF00571 CBS domain AR1Y2_2020 PF03471 Transporter associated domain AR1Y2_2021 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AR1Y2_2022 PF00842 Alanine racemase, C-terminal domain AR1Y2_2022 PF01168 Alanine racemase, N-terminal domain AR1Y2_2023 PF01256 Carbohydrate kinase AR1Y2_2023 PF03853 YjeF-related protein N-terminus AR1Y2_2024 PF01648 4'-phosphopantetheinyl transferase superfamily AR1Y2_2025 PF02629 CoA binding domain AR1Y2_2025 PF06971 Putative DNA-binding protein N-terminus AR1Y2_2026 PF00005 ABC transporter AR1Y2_2026 PF16326 ABC transporter C-terminal domain AR1Y2_2026 PF12848 ABC transporter AR1Y2_2027 PF00535 Glycosyl transferase family 2 AR1Y2_2028 PF13411 MerR HTH family regulatory protein AR1Y2_2029 PF00005 ABC transporter AR1Y2_2034 PF04055 Radical SAM superfamily AR1Y2_2038 PF03432 Relaxase/Mobilisation nuclease domain AR1Y2_2041 PF01751 Toprim domain AR1Y2_2041 PF01131 DNA topoisomerase AR1Y2_2045 PF00877 NlpC/P60 family AR1Y2_2046 PF01555 DNA methylase AR1Y2_2057 PF06969 HemN C-terminal domain AR1Y2_2057 PF04055 Radical SAM superfamily AR1Y2_2058 PF06421 GTP-binding protein LepA C-terminus AR1Y2_2058 PF00679 Elongation factor G C-terminus AR1Y2_2058 PF00009 Elongation factor Tu GTP binding domain AR1Y2_2058 PF03144 Elongation factor Tu domain 2 AR1Y2_2061 PF03418 Germination protease AR1Y2_2062 PF01649 Ribosomal protein S20 AR1Y2_2064 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_2065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_2065 PF01842 ACT domain AR1Y2_2065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_2066 PF03611 PTS system sugar-specific permease component AR1Y2_2068 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2069 PF04198 Putative sugar-binding domain AR1Y2_2070 PF00107 Zinc-binding dehydrogenase AR1Y2_2070 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2071 PF00676 Dehydrogenase E1 component AR1Y2_2072 PF02779 Transketolase, pyrimidine binding domain AR1Y2_2072 PF02780 Transketolase, C-terminal domain AR1Y2_2073 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_2075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_2075 PF03466 LysR substrate binding domain AR1Y2_2079 PF00753 Metallo-beta-lactamase superfamily AR1Y2_2079 PF13567 Domain of unknown function (DUF4131) AR1Y2_2079 PF03772 Competence protein AR1Y2_2081 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2081 PF00672 HAMP domain AR1Y2_2081 PF13426 PAS domain AR1Y2_2081 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2082 PF00072 Response regulator receiver domain AR1Y2_2082 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2085 PF00202 Aminotransferase class-III AR1Y2_2086 PF00696 Amino acid kinase family AR1Y2_2087 PF01960 ArgJ family AR1Y2_2088 PF01118 Semialdehyde dehydrogenase, NAD binding domain AR1Y2_2088 PF02774 Semialdehyde dehydrogenase, dimerisation domain AR1Y2_2089 PF00764 Arginosuccinate synthase AR1Y2_2090 PF02698 DUF218 domain AR1Y2_2091 PF01131 DNA topoisomerase AR1Y2_2091 PF01751 Toprim domain AR1Y2_2094 PF14698 Argininosuccinate lyase C-terminal AR1Y2_2094 PF00206 Lyase AR1Y2_2096 PF00924 Mechanosensitive ion channel AR1Y2_2096 PF05552 Conserved TM helix AR1Y2_2099 PF01118 Semialdehyde dehydrogenase, NAD binding domain AR1Y2_2099 PF02774 Semialdehyde dehydrogenase, dimerisation domain AR1Y2_2100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_2100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_2101 PF00266 Aminotransferase class-V AR1Y2_2102 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AR1Y2_2102 PF00205 Thiamine pyrophosphate enzyme, central domain AR1Y2_2102 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AR1Y2_2103 PF00920 Dehydratase family AR1Y2_2104 PF00180 Isocitrate/isopropylmalate dehydrogenase AR1Y2_2108 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_2109 PF05036 Sporulation related domain AR1Y2_2109 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_2111 PF00717 Peptidase S24-like AR1Y2_2111 PF01726 LexA DNA binding domain AR1Y2_2113 PF01966 HD domain AR1Y2_2114 PF01467 Cytidylyltransferase-like AR1Y2_2115 PF01985 CRS1 / YhbY (CRM) domain AR1Y2_2116 PF09269 Domain of unknown function (DUF1967) AR1Y2_2116 PF01018 GTP1/OBG AR1Y2_2116 PF01926 50S ribosome-binding GTPase AR1Y2_2117 PF01016 Ribosomal L27 protein AR1Y2_2118 PF04327 Cysteine protease Prp AR1Y2_2119 PF00829 Ribosomal prokaryotic L21 protein AR1Y2_2120 PF00575 S1 RNA binding domain AR1Y2_2120 PF10150 Ribonuclease E/G family AR1Y2_2122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2122 PF01627 Hpt domain AR1Y2_2122 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2122 PF00072 Response regulator receiver domain AR1Y2_2126 PF17863 AAA lid domain AR1Y2_2126 PF07726 ATPase family associated with various cellular activities (AAA) AR1Y2_2127 PF03553 Na+/H+ antiporter family AR1Y2_2128 PF00330 Aconitase family (aconitate hydratase) AR1Y2_2128 PF00694 Aconitase C-terminal domain AR1Y2_2130 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_2131 PF06134 L-rhamnose isomerase (RhaA) AR1Y2_2132 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AR1Y2_2132 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AR1Y2_2133 PF05336 L-rhamnose mutarotase AR1Y2_2136 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system AR1Y2_2137 PF12833 Helix-turn-helix domain AR1Y2_2137 PF02311 AraC-like ligand binding domain AR1Y2_2138 PF08543 Phosphomethylpyrimidine kinase AR1Y2_2138 PF02581 Thiamine monophosphate synthase AR1Y2_2139 PF02581 Thiamine monophosphate synthase AR1Y2_2140 PF02110 Hydroxyethylthiazole kinase family AR1Y2_2141 PF00082 Subtilase family AR1Y2_2146 PF01641 SelR domain AR1Y2_2146 PF01625 Peptide methionine sulfoxide reductase AR1Y2_2147 PF01625 Peptide methionine sulfoxide reductase AR1Y2_2150 PF00005 ABC transporter AR1Y2_2150 PF02687 FtsX-like permease family AR1Y2_2150 PF12704 MacB-like periplasmic core domain AR1Y2_2151 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2151 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2151 PF16736 Single Cache-like AR1Y2_2151 PF00989 PAS fold AR1Y2_2152 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2152 PF00072 Response regulator receiver domain AR1Y2_2161 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_2161 PF03466 LysR substrate binding domain AR1Y2_2163 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_2166 PF00005 ABC transporter AR1Y2_2170 PF01554 MatE AR1Y2_2172 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_2172 PF03466 LysR substrate binding domain AR1Y2_2173 PF07690 Major Facilitator Superfamily AR1Y2_2174 PF00155 Aminotransferase class I and II AR1Y2_2179 PF00005 ABC transporter AR1Y2_2181 PF14319 Transposase zinc-binding domain AR1Y2_2181 PF04986 Putative transposase AR1Y2_2186 PF17760 UvrA interaction domain AR1Y2_2186 PF17755 UvrA DNA-binding domain AR1Y2_2186 PF00005 ABC transporter AR1Y2_2189 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_2191 PF13280 WYL domain AR1Y2_2191 PF08279 HTH domain AR1Y2_2194 PF08264 Anticodon-binding domain of tRNA AR1Y2_2194 PF13603 Leucyl-tRNA synthetase, Domain 2 AR1Y2_2194 PF09334 tRNA synthetases class I (M) AR1Y2_2194 PF00133 tRNA synthetases class I (I, L, M and V) AR1Y2_2195 PF03734 L,D-transpeptidase catalytic domain AR1Y2_2196 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AR1Y2_2197 PF02127 Aminopeptidase I zinc metalloprotease (M18) AR1Y2_2198 PF03960 ArsC family AR1Y2_2199 PF00768 D-alanyl-D-alanine carboxypeptidase AR1Y2_2199 PF07943 Penicillin-binding protein 5, C-terminal domain AR1Y2_2200 PF17152 Periplasmic sensor domain AR1Y2_2200 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_2201 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_2201 PF00563 EAL domain AR1Y2_2201 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_2202 PF01795 MraW methylase family AR1Y2_2204 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AR1Y2_2204 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AR1Y2_2212 PF00704 Glycosyl hydrolases family 18 AR1Y2_2212 PF01476 LysM domain AR1Y2_2214 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AR1Y2_2216 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AR1Y2_2217 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_2217 PF00563 EAL domain AR1Y2_2217 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_2220 PF01551 Peptidase family M23 AR1Y2_2221 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2221 PF01627 Hpt domain AR1Y2_2221 PF00072 Response regulator receiver domain AR1Y2_2221 PF00672 HAMP domain AR1Y2_2221 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AR1Y2_2221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2222 PF01547 Bacterial extracellular solute-binding protein AR1Y2_2223 PF02378 Phosphotransferase system, EIIC AR1Y2_2226 PF00155 Aminotransferase class I and II AR1Y2_2229 PF01795 MraW methylase family AR1Y2_2230 PF12833 Helix-turn-helix domain AR1Y2_2231 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_2233 PF01381 Helix-turn-helix AR1Y2_2234 PF01012 Electron transfer flavoprotein domain AR1Y2_2234 PF00766 Electron transfer flavoprotein FAD-binding domain AR1Y2_2235 PF01012 Electron transfer flavoprotein domain AR1Y2_2236 PF02770 Acyl-CoA dehydrogenase, middle domain AR1Y2_2236 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AR1Y2_2236 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AR1Y2_2237 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AR1Y2_2237 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AR1Y2_2238 PF00378 Enoyl-CoA hydratase/isomerase AR1Y2_2239 PF02803 Thiolase, C-terminal domain AR1Y2_2239 PF00108 Thiolase, N-terminal domain AR1Y2_2241 PF00011 Hsp20/alpha crystallin family AR1Y2_2242 PF10369 Small subunit of acetolactate synthase AR1Y2_2243 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AR1Y2_2243 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AR1Y2_2243 PF00205 Thiamine pyrophosphate enzyme, central domain AR1Y2_2244 PF04079 Segregation and condensation complex subunit ScpB AR1Y2_2245 PF02616 Segregation and condensation protein ScpA AR1Y2_2246 PF00149 Calcineurin-like phosphoesterase AR1Y2_2248 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_2248 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_2249 PF03608 PTS system enzyme II sorbitol-specific factor AR1Y2_2251 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2251 PF00874 PRD domain AR1Y2_2251 PF05043 Mga helix-turn-helix domain AR1Y2_2251 PF08279 HTH domain AR1Y2_2252 PF00106 short chain dehydrogenase AR1Y2_2253 PF00768 D-alanyl-D-alanine carboxypeptidase AR1Y2_2253 PF07943 Penicillin-binding protein 5, C-terminal domain AR1Y2_2254 PF00293 NUDIX domain AR1Y2_2255 PF03717 Penicillin-binding Protein dimerisation domain AR1Y2_2255 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_2256 PF01098 Cell cycle protein AR1Y2_2259 PF05496 Holliday junction DNA helicase RuvB P-loop domain AR1Y2_2259 PF17864 RuvB AAA lid domain AR1Y2_2259 PF05491 RuvB C-terminal winged helix domain AR1Y2_2260 PF01330 RuvA N terminal domain AR1Y2_2260 PF07499 RuvA, C-terminal domain AR1Y2_2263 PF04172 LrgB-like family AR1Y2_2267 PF13333 Integrase core domain AR1Y2_2267 PF00665 Integrase core domain AR1Y2_2267 PF13276 HTH-like domain AR1Y2_2271 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AR1Y2_2272 PF01348 Type II intron maturase AR1Y2_2272 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AR1Y2_2274 PF18277 AbrB C-terminal domain AR1Y2_2274 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AR1Y2_2277 PF13411 MerR HTH family regulatory protein AR1Y2_2277 PF07739 TipAS antibiotic-recognition domain AR1Y2_2278 PF01053 Cys/Met metabolism PLP-dependent enzyme AR1Y2_2279 PF09383 NIL domain AR1Y2_2279 PF00005 ABC transporter AR1Y2_2280 PF02653 Branched-chain amino acid transport system / permease component AR1Y2_2283 PF00575 S1 RNA binding domain AR1Y2_2283 PF03725 3' exoribonuclease family, domain 2 AR1Y2_2283 PF01138 3' exoribonuclease family, domain 1 AR1Y2_2283 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AR1Y2_2283 PF00013 KH domain AR1Y2_2284 PF00312 Ribosomal protein S15 AR1Y2_2285 PF14748 Pyrroline-5-carboxylate reductase dimerisation AR1Y2_2285 PF03807 NADP oxidoreductase coenzyme F420-dependent AR1Y2_2286 PF01479 S4 domain AR1Y2_2286 PF00849 RNA pseudouridylate synthase AR1Y2_2292 PF01168 Alanine racemase, N-terminal domain AR1Y2_2294 PF04055 Radical SAM superfamily AR1Y2_2294 PF16199 Radical_SAM C-terminal domain AR1Y2_2295 PF00768 D-alanyl-D-alanine carboxypeptidase AR1Y2_2295 PF07943 Penicillin-binding protein 5, C-terminal domain AR1Y2_2296 PF02142 MGS-like domain AR1Y2_2297 PF01098 Cell cycle protein AR1Y2_2298 PF03776 Septum formation topological specificity factor MinE AR1Y2_2299 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AR1Y2_2300 PF03775 Septum formation inhibitor MinC, C-terminal domain AR1Y2_2301 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_2301 PF03717 Penicillin-binding Protein dimerisation domain AR1Y2_2305 PF04002 RadC-like JAB domain AR1Y2_2306 PF06838 Methionine gamma-lyase AR1Y2_2308 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AR1Y2_2309 PF08676 MutL C terminal dimerisation domain AR1Y2_2309 PF01119 DNA mismatch repair protein, C-terminal domain AR1Y2_2310 PF01624 MutS domain I AR1Y2_2310 PF05188 MutS domain II AR1Y2_2310 PF05192 MutS domain III AR1Y2_2310 PF05190 MutS family domain IV AR1Y2_2310 PF00488 MutS domain V AR1Y2_2311 PF00919 Uncharacterized protein family UPF0004 AR1Y2_2311 PF01938 TRAM domain AR1Y2_2311 PF04055 Radical SAM superfamily AR1Y2_2312 PF03275 UDP-galactopyranose mutase AR1Y2_2313 PF02690 Na+/Pi-cotransporter AR1Y2_2314 PF02903 Alpha amylase, N-terminal ig-like domain AR1Y2_2314 PF00128 Alpha amylase, catalytic domain AR1Y2_2315 PF00343 Carbohydrate phosphorylase AR1Y2_2316 PF08323 Starch synthase catalytic domain AR1Y2_2316 PF00534 Glycosyl transferases group 1 AR1Y2_2317 PF00483 Nucleotidyl transferase AR1Y2_2318 PF00483 Nucleotidyl transferase AR1Y2_2319 PF02806 Alpha amylase, C-terminal all-beta domain AR1Y2_2319 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AR1Y2_2319 PF00128 Alpha amylase, catalytic domain AR1Y2_2320 PF13291 ACT domain AR1Y2_2320 PF00291 Pyridoxal-phosphate dependent enzyme AR1Y2_2321 PF02881 SRP54-type protein, helical bundle domain AR1Y2_2321 PF00448 SRP54-type protein, GTPase domain AR1Y2_2322 PF02463 RecF/RecN/SMC N terminal domain AR1Y2_2322 PF06470 SMC proteins Flexible Hinge Domain AR1Y2_2323 PF14622 Ribonuclease-III-like AR1Y2_2323 PF00035 Double-stranded RNA binding motif AR1Y2_2324 PF02504 Fatty acid synthesis protein AR1Y2_2325 PF01783 Ribosomal L32p protein family AR1Y2_2327 PF00871 Acetokinase family AR1Y2_2330 PF05636 HIGH Nucleotidyl Transferase AR1Y2_2331 PF07670 Nucleoside recognition AR1Y2_2333 PF01467 Cytidylyltransferase-like AR1Y2_2335 PF00269 Small, acid-soluble spore proteins, alpha/beta type AR1Y2_2336 PF00708 Acylphosphatase AR1Y2_2337 PF00270 DEAD/DEAH box helicase AR1Y2_2337 PF00271 Helicase conserved C-terminal domain AR1Y2_2337 PF17191 RecG wedge domain AR1Y2_2338 PF02734 DAK2 domain AR1Y2_2338 PF13684 Dihydroxyacetone kinase family AR1Y2_2344 PF00391 PEP-utilising enzyme, mobile domain AR1Y2_2344 PF00224 Pyruvate kinase, barrel domain AR1Y2_2344 PF02887 Pyruvate kinase, alpha/beta domain AR1Y2_2349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_2349 PF03466 LysR substrate binding domain AR1Y2_2351 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_2352 PF00005 ABC transporter AR1Y2_2355 PF00977 Histidine biosynthesis protein AR1Y2_2356 PF00117 Glutamine amidotransferase class-I AR1Y2_2358 PF00989 PAS fold AR1Y2_2358 PF18698 Histidine kinase sensor domain AR1Y2_2358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2358 PF00672 HAMP domain AR1Y2_2358 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2359 PF00072 Response regulator receiver domain AR1Y2_2359 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2364 PF01592 NifU-like N terminal domain AR1Y2_2365 PF00266 Aminotransferase class-V AR1Y2_2366 PF02082 Transcriptional regulator AR1Y2_2367 PF01943 Polysaccharide biosynthesis protein AR1Y2_2367 PF14667 Polysaccharide biosynthesis C-terminal domain AR1Y2_2371 PF02608 ABC transporter substrate-binding protein PnrA-like AR1Y2_2373 PF00579 tRNA synthetases class I (W and Y) AR1Y2_2378 PF04986 Putative transposase AR1Y2_2378 PF14319 Transposase zinc-binding domain AR1Y2_2380 PF00149 Calcineurin-like phosphoesterase AR1Y2_2381 PF08281 Sigma-70, region 4 AR1Y2_2381 PF04542 Sigma-70 region 2 AR1Y2_2382 PF08032 RNA 2'-O ribose methyltransferase substrate binding AR1Y2_2382 PF00588 SpoU rRNA Methylase family AR1Y2_2383 PF00636 Ribonuclease III domain AR1Y2_2384 PF09190 DALR domain AR1Y2_2384 PF01406 tRNA synthetases class I (C) catalytic domain AR1Y2_2385 PF00132 Bacterial transferase hexapeptide (six repeats) AR1Y2_2388 PF00005 ABC transporter AR1Y2_2389 PF02632 BioY family AR1Y2_2390 PF06968 Biotin and Thiamin Synthesis associated domain AR1Y2_2390 PF04055 Radical SAM superfamily AR1Y2_2393 PF00072 Response regulator receiver domain AR1Y2_2393 PF03861 ANTAR domain AR1Y2_2394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2394 PF00672 HAMP domain AR1Y2_2394 PF00072 Response regulator receiver domain AR1Y2_2394 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2394 PF01627 Hpt domain AR1Y2_2394 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AR1Y2_2395 PF00689 Cation transporting ATPase, C-terminus AR1Y2_2395 PF00690 Cation transporter/ATPase, N-terminus AR1Y2_2398 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_2398 PF02874 ATP synthase alpha/beta family, beta-barrel domain AR1Y2_2400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_2400 PF00306 ATP synthase alpha/beta chain, C terminal domain AR1Y2_2400 PF02874 ATP synthase alpha/beta family, beta-barrel domain AR1Y2_2401 PF00213 ATP synthase delta (OSCP) subunit AR1Y2_2403 PF00137 ATP synthase subunit C AR1Y2_2404 PF00119 ATP synthase A chain AR1Y2_2406 PF09347 Domain of unknown function (DUF1989) AR1Y2_2408 PF00580 UvrD/REP helicase N-terminal domain AR1Y2_2408 PF13361 UvrD-like helicase C-terminal domain AR1Y2_2410 PF01371 Trp repressor protein AR1Y2_2414 PF00005 ABC transporter AR1Y2_2415 PF07730 Histidine kinase AR1Y2_2415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2416 PF00072 Response regulator receiver domain AR1Y2_2416 PF00196 Bacterial regulatory proteins, luxR family AR1Y2_2417 PF03471 Transporter associated domain AR1Y2_2417 PF01595 Cyclin M transmembrane N-terminal domain AR1Y2_2417 PF00571 CBS domain AR1Y2_2419 PF13361 UvrD-like helicase C-terminal domain AR1Y2_2419 PF00580 UvrD/REP helicase N-terminal domain AR1Y2_2420 PF00749 tRNA synthetases class I (E and Q), catalytic domain AR1Y2_2421 PF10396 GTP-binding protein TrmE N-terminus AR1Y2_2421 PF12631 MnmE helical domain AR1Y2_2421 PF01926 50S ribosome-binding GTPase AR1Y2_2423 PF03932 CutC family AR1Y2_2426 PF05524 PEP-utilising enzyme, N-terminal AR1Y2_2426 PF02896 PEP-utilising enzyme, TIM barrel domain AR1Y2_2426 PF00391 PEP-utilising enzyme, mobile domain AR1Y2_2427 PF00381 PTS HPr component phosphorylation site AR1Y2_2428 PF00874 PRD domain AR1Y2_2428 PF03123 CAT RNA binding domain AR1Y2_2429 PF13167 GTP-binding GTPase N-terminal AR1Y2_2429 PF16360 GTP-binding GTPase Middle Region AR1Y2_2429 PF01926 50S ribosome-binding GTPase AR1Y2_2432 PF00106 short chain dehydrogenase AR1Y2_2433 PF01418 Helix-turn-helix domain, rpiR family AR1Y2_2433 PF01380 SIS domain AR1Y2_2434 PF00107 Zinc-binding dehydrogenase AR1Y2_2434 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2435 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_2436 PF03609 PTS system sorbose-specific iic component AR1Y2_2437 PF03830 PTS system sorbose subfamily IIB component AR1Y2_2438 PF03610 PTS system fructose IIA component AR1Y2_2440 PF01554 MatE AR1Y2_2443 PF00082 Subtilase family AR1Y2_2443 PF02225 PA domain AR1Y2_2443 PF00746 LPXTG cell wall anchor motif AR1Y2_2443 PF06280 Fn3-like domain AR1Y2_2445 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_2446 PF00005 ABC transporter AR1Y2_2446 PF17845 FbpC C-terminal regulatory nucleotide binding domain AR1Y2_2448 PF14602 Hexapeptide repeat of succinyl-transferase AR1Y2_2448 PF12804 MobA-like NTP transferase domain AR1Y2_2448 PF00132 Bacterial transferase hexapeptide (six repeats) AR1Y2_2449 PF02625 XdhC and CoxI family AR1Y2_2449 PF13478 XdhC Rossmann domain AR1Y2_2450 PF00557 Metallopeptidase family M24 AR1Y2_2450 PF02810 SEC-C motif AR1Y2_2452 PF00005 ABC transporter AR1Y2_2452 PF13732 Domain of unknown function (DUF4162) AR1Y2_2453 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_2453 PF08361 MAATS-type transcriptional repressor, C-terminal region AR1Y2_2454 PF13091 PLD-like domain AR1Y2_2459 PF00005 ABC transporter AR1Y2_2459 PF13732 Domain of unknown function (DUF4162) AR1Y2_2463 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AR1Y2_2463 PF00056 lactate/malate dehydrogenase, NAD binding domain AR1Y2_2464 PF00563 EAL domain AR1Y2_2464 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_2464 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_2466 PF02645 Uncharacterised protein, DegV family COG1307 AR1Y2_2467 PF00994 Probable molybdopterin binding domain AR1Y2_2469 PF01967 MoaC family AR1Y2_2471 PF02625 XdhC and CoxI family AR1Y2_2471 PF13478 XdhC Rossmann domain AR1Y2_2472 PF01979 Amidohydrolase family AR1Y2_2473 PF00111 2Fe-2S iron-sulfur cluster binding domain AR1Y2_2473 PF01799 [2Fe-2S] binding domain AR1Y2_2473 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AR1Y2_2473 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AR1Y2_2474 PF00860 Permease family AR1Y2_2475 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_2475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AR1Y2_2476 PF01979 Amidohydrolase family AR1Y2_2478 PF00291 Pyridoxal-phosphate dependent enzyme AR1Y2_2479 PF01546 Peptidase family M20/M25/M40 AR1Y2_2479 PF07687 Peptidase dimerisation domain AR1Y2_2480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AR1Y2_2480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AR1Y2_2481 PF00696 Amino acid kinase family AR1Y2_2482 PF03009 Glycerophosphoryl diester phosphodiesterase family AR1Y2_2483 PF09278 MerR, DNA binding AR1Y2_2483 PF00376 MerR family regulatory protein AR1Y2_2485 PF07739 TipAS antibiotic-recognition domain AR1Y2_2485 PF13411 MerR HTH family regulatory protein AR1Y2_2487 PF00085 Thioredoxin AR1Y2_2488 PF01381 Helix-turn-helix AR1Y2_2491 PF00877 NlpC/P60 family AR1Y2_2491 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain AR1Y2_2492 PF00453 Ribosomal protein L20 AR1Y2_2493 PF01632 Ribosomal protein L35 AR1Y2_2494 PF00707 Translation initiation factor IF-3, C-terminal domain AR1Y2_2494 PF05198 Translation initiation factor IF-3, N-terminal domain AR1Y2_2495 PF03144 Elongation factor Tu domain 2 AR1Y2_2495 PF00009 Elongation factor Tu GTP binding domain AR1Y2_2495 PF16658 Class II release factor RF3, C-terminal domain AR1Y2_2497 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_2498 PF04198 Putative sugar-binding domain AR1Y2_2499 PF03609 PTS system sorbose-specific iic component AR1Y2_2500 PF03830 PTS system sorbose subfamily IIB component AR1Y2_2501 PF00107 Zinc-binding dehydrogenase AR1Y2_2501 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2502 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_2503 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_2504 PF00005 ABC transporter AR1Y2_2504 PF00571 CBS domain AR1Y2_2511 PF13280 WYL domain AR1Y2_2511 PF08279 HTH domain AR1Y2_2512 PF01263 Aldose 1-epimerase AR1Y2_2513 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_2514 PF04073 Aminoacyl-tRNA editing domain AR1Y2_2515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_2515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_2516 PF03928 Haem-degrading AR1Y2_2517 PF00294 pfkB family carbohydrate kinase AR1Y2_2518 PF00107 Zinc-binding dehydrogenase AR1Y2_2518 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2519 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_2520 PF03611 PTS system sugar-specific permease component AR1Y2_2521 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_2523 PF00874 PRD domain AR1Y2_2523 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2523 PF08279 HTH domain AR1Y2_2523 PF05043 Mga helix-turn-helix domain AR1Y2_2526 PF16199 Radical_SAM C-terminal domain AR1Y2_2526 PF04055 Radical SAM superfamily AR1Y2_2527 PF13344 Haloacid dehalogenase-like hydrolase AR1Y2_2528 PF13685 Iron-containing alcohol dehydrogenase AR1Y2_2531 PF13685 Iron-containing alcohol dehydrogenase AR1Y2_2532 PF02502 Ribose/Galactose Isomerase AR1Y2_2533 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_2533 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_2534 PF03608 PTS system enzyme II sorbitol-specific factor AR1Y2_2536 PF04198 Putative sugar-binding domain AR1Y2_2538 PF02934 GatB/GatE catalytic domain AR1Y2_2538 PF02637 GatB domain AR1Y2_2539 PF01425 Amidase AR1Y2_2540 PF02686 Glu-tRNAGln amidotransferase C subunit AR1Y2_2544 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_2546 PF03193 RsgA GTPase AR1Y2_2546 PF16745 RsgA N-terminal domain AR1Y2_2547 PF03793 PASTA domain AR1Y2_2547 PF00069 Protein kinase domain AR1Y2_2549 PF04055 Radical SAM superfamily AR1Y2_2550 PF01189 16S rRNA methyltransferase RsmB/F AR1Y2_2550 PF01029 NusB family AR1Y2_2551 PF00551 Formyl transferase AR1Y2_2551 PF02911 Formyl transferase, C-terminal domain AR1Y2_2552 PF01327 Polypeptide deformylase AR1Y2_2553 PF04851 Type III restriction enzyme, res subunit AR1Y2_2553 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AR1Y2_2553 PF18074 Primosomal protein N C-terminal domain AR1Y2_2553 PF17764 3′ DNA-binding domain (3′BD) AR1Y2_2553 PF00271 Helicase conserved C-terminal domain AR1Y2_2554 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AR1Y2_2554 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AR1Y2_2554 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AR1Y2_2554 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AR1Y2_2557 PF01966 HD domain AR1Y2_2557 PF13286 Phosphohydrolase-associated domain AR1Y2_2558 PF02666 Phosphatidylserine decarboxylase AR1Y2_2559 PF01066 CDP-alcohol phosphatidyltransferase AR1Y2_2562 PF00873 AcrB/AcrD/AcrF family AR1Y2_2563 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AR1Y2_2563 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AR1Y2_2564 PF00478 IMP dehydrogenase / GMP reductase domain AR1Y2_2564 PF00571 CBS domain AR1Y2_2566 PF13247 4Fe-4S dicluster domain AR1Y2_2566 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AR1Y2_2566 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_2567 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AR1Y2_2567 PF00175 Oxidoreductase NAD-binding domain AR1Y2_2570 PF00118 TCP-1/cpn60 chaperonin family AR1Y2_2571 PF00166 Chaperonin 10 Kd subunit AR1Y2_2573 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AR1Y2_2573 PF00749 tRNA synthetases class I (E and Q), catalytic domain AR1Y2_2574 PF18073 Rubredoxin metal binding domain AR1Y2_2576 PF00004 ATPase family associated with various cellular activities (AAA) AR1Y2_2576 PF10431 C-terminal, D2-small domain, of ClpB protein AR1Y2_2576 PF02861 Clp amino terminal domain, pathogenicity island component AR1Y2_2576 PF17871 AAA lid domain AR1Y2_2576 PF07724 AAA domain (Cdc48 subfamily) AR1Y2_2578 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AR1Y2_2578 PF02843 Phosphoribosylglycinamide synthetase, C domain AR1Y2_2578 PF02844 Phosphoribosylglycinamide synthetase, N domain AR1Y2_2579 PF00551 Formyl transferase AR1Y2_2580 PF02769 AIR synthase related protein, C-terminal domain AR1Y2_2580 PF00586 AIR synthase related protein, N-terminal domain AR1Y2_2581 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_2581 PF01476 LysM domain AR1Y2_2582 PF00731 AIR carboxylase AR1Y2_2587 PF00156 Phosphoribosyl transferase domain AR1Y2_2589 PF01180 Dihydroorotate dehydrogenase AR1Y2_2590 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B AR1Y2_2590 PF00175 Oxidoreductase NAD-binding domain AR1Y2_2591 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AR1Y2_2592 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2592 PF00989 PAS fold AR1Y2_2592 PF16736 Single Cache-like AR1Y2_2592 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2593 PF00072 Response regulator receiver domain AR1Y2_2593 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2594 PF01895 PhoU domain AR1Y2_2595 PF00005 ABC transporter AR1Y2_2596 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_2597 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_2598 PF12849 PBP superfamily domain AR1Y2_2603 PF03611 PTS system sugar-specific permease component AR1Y2_2604 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_2605 PF00107 Zinc-binding dehydrogenase AR1Y2_2605 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2610 PF03129 Anticodon binding domain AR1Y2_2610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AR1Y2_2612 PF01926 50S ribosome-binding GTPase AR1Y2_2612 PF07650 KH domain AR1Y2_2613 PF00675 Insulinase (Peptidase family M16) AR1Y2_2613 PF05193 Peptidase M16 inactive domain AR1Y2_2613 PF08367 Peptidase M16C associated AR1Y2_2617 PF13411 MerR HTH family regulatory protein AR1Y2_2617 PF07739 TipAS antibiotic-recognition domain AR1Y2_2618 PF02142 MGS-like domain AR1Y2_2618 PF01808 AICARFT/IMPCHase bienzyme AR1Y2_2620 PF02142 MGS-like domain AR1Y2_2622 PF01183 Glycosyl hydrolases family 25 AR1Y2_2624 PF04545 Sigma-70, region 4 AR1Y2_2624 PF04542 Sigma-70 region 2 AR1Y2_2626 PF00091 Tubulin/FtsZ family, GTPase domain AR1Y2_2626 PF12327 FtsZ family, C-terminal domain AR1Y2_2628 PF01098 Cell cycle protein AR1Y2_2629 PF08245 Mur ligase middle domain AR1Y2_2629 PF02875 Mur ligase family, glutamate ligase domain AR1Y2_2630 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AR1Y2_2630 PF00953 Glycosyl transferase family 4 AR1Y2_2631 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_2631 PF03717 Penicillin-binding Protein dimerisation domain AR1Y2_2631 PF03793 PASTA domain AR1Y2_2633 PF03717 Penicillin-binding Protein dimerisation domain AR1Y2_2633 PF03793 PASTA domain AR1Y2_2633 PF00905 Penicillin binding protein transpeptidase domain AR1Y2_2635 PF01795 MraW methylase family AR1Y2_2636 PF02381 MraZ protein, putative antitoxin-like AR1Y2_2637 PF01790 Prolipoprotein diacylglyceryl transferase AR1Y2_2638 PF06071 Protein of unknown function (DUF933) AR1Y2_2638 PF01926 50S ribosome-binding GTPase AR1Y2_2639 PF00877 NlpC/P60 family AR1Y2_2640 PF00155 Aminotransferase class I and II AR1Y2_2642 PF00120 Glutamine synthetase, catalytic domain AR1Y2_2642 PF03951 Glutamine synthetase, beta-Grasp domain AR1Y2_2643 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AR1Y2_2643 PF02142 MGS-like domain AR1Y2_2643 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AR1Y2_2644 PF00117 Glutamine amidotransferase class-I AR1Y2_2644 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AR1Y2_2645 PF02677 Epoxyqueuosine reductase QueH AR1Y2_2647 PF01906 Putative heavy-metal-binding AR1Y2_2665 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AR1Y2_2665 PF18277 AbrB C-terminal domain AR1Y2_2673 PF00877 NlpC/P60 family AR1Y2_2674 PF01476 LysM domain AR1Y2_2692 PF00589 Phage integrase family AR1Y2_2692 PF02899 Phage integrase, N-terminal SAM-like domain AR1Y2_2708 PF13614 AAA domain AR1Y2_2711 PF00075 RNase H AR1Y2_2723 PF06445 GyrI-like small molecule binding domain AR1Y2_2723 PF13411 MerR HTH family regulatory protein AR1Y2_2724 PF01554 MatE AR1Y2_2725 PF03030 Inorganic H+ pyrophosphatase AR1Y2_2726 PF01063 Amino-transferase class IV AR1Y2_2727 PF00186 Dihydrofolate reductase AR1Y2_2728 PF00303 Thymidylate synthase AR1Y2_2731 PF00155 Aminotransferase class I and II AR1Y2_2732 PF00155 Aminotransferase class I and II AR1Y2_2733 PF05173 Dihydrodipicolinate reductase, C-terminus AR1Y2_2733 PF01113 Dihydrodipicolinate reductase, N-terminus AR1Y2_2734 PF00701 Dihydrodipicolinate synthetase family AR1Y2_2735 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AR1Y2_2739 PF06968 Biotin and Thiamin Synthesis associated domain AR1Y2_2739 PF04055 Radical SAM superfamily AR1Y2_2740 PF00196 Bacterial regulatory proteins, luxR family AR1Y2_2743 PF00005 ABC transporter AR1Y2_2746 PF00132 Bacterial transferase hexapeptide (six repeats) AR1Y2_2747 PF06874 Firmicute fructose-1,6-bisphosphatase AR1Y2_2748 PF07724 AAA domain (Cdc48 subfamily) AR1Y2_2748 PF10431 C-terminal, D2-small domain, of ClpB protein AR1Y2_2748 PF06689 ClpX C4-type zinc finger AR1Y2_2749 PF00155 Aminotransferase class I and II AR1Y2_2749 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_2750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AR1Y2_2751 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_2751 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_2752 PF00005 ABC transporter AR1Y2_2752 PF00664 ABC transporter transmembrane region AR1Y2_2753 PF00664 ABC transporter transmembrane region AR1Y2_2753 PF00005 ABC transporter AR1Y2_2754 PF01047 MarR family AR1Y2_2755 PF07859 alpha/beta hydrolase fold AR1Y2_2758 PF07516 SecA Wing and Scaffold domain AR1Y2_2758 PF01043 SecA preprotein cross-linking domain AR1Y2_2758 PF07517 SecA DEAD-like domain AR1Y2_2758 PF02810 SEC-C motif AR1Y2_2760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2760 PF00072 Response regulator receiver domain AR1Y2_2760 PF09308 LuxQ, periplasmic AR1Y2_2760 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2761 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_2762 PF13350 Tyrosine phosphatase family AR1Y2_2764 PF00248 Aldo/keto reductase family AR1Y2_2765 PF16193 AAA C-terminal domain AR1Y2_2765 PF05496 Holliday junction DNA helicase RuvB P-loop domain AR1Y2_2765 PF12002 MgsA AAA+ ATPase C terminal AR1Y2_2767 PF12116 Stage III sporulation protein D AR1Y2_2768 PF07943 Penicillin-binding protein 5, C-terminal domain AR1Y2_2768 PF00768 D-alanyl-D-alanine carboxypeptidase AR1Y2_2770 PF07683 Cobalamin synthesis protein cobW C-terminal domain AR1Y2_2770 PF02492 CobW/HypB/UreG, nucleotide-binding domain AR1Y2_2776 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AR1Y2_2776 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AR1Y2_2777 PF00941 FAD binding domain in molybdopterin dehydrogenase AR1Y2_2777 PF03450 CO dehydrogenase flavoprotein C-terminal domain AR1Y2_2778 PF00111 2Fe-2S iron-sulfur cluster binding domain AR1Y2_2778 PF01799 [2Fe-2S] binding domain AR1Y2_2781 PF00313 'Cold-shock' DNA-binding domain AR1Y2_2782 PF00455 DeoR C terminal sensor domain AR1Y2_2782 PF08220 DeoR-like helix-turn-helix domain AR1Y2_2784 PF02378 Phosphotransferase system, EIIC AR1Y2_2784 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_2784 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2785 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_2785 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_2786 PF01791 DeoC/LacD family aldolase AR1Y2_2787 PF00325 Bacterial regulatory proteins, crp family AR1Y2_2787 PF04198 Putative sugar-binding domain AR1Y2_2790 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_2792 PF01261 Xylose isomerase-like TIM barrel AR1Y2_2793 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_2794 PF03611 PTS system sugar-specific permease component AR1Y2_2795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2796 PF02540 NAD synthase AR1Y2_2796 PF00795 Carbon-nitrogen hydrolase AR1Y2_2797 PF00472 RF-1 domain AR1Y2_2797 PF03462 PCRF domain AR1Y2_2798 PF05175 Methyltransferase small domain AR1Y2_2798 PF17827 PrmC N-terminal domain AR1Y2_2799 PF07136 Protein of unknown function (DUF1385) AR1Y2_2800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AR1Y2_2800 PF07498 Rho termination factor, N-terminal domain AR1Y2_2800 PF07497 Rho termination factor, RNA-binding domain AR1Y2_2801 PF04542 Sigma-70 region 2 AR1Y2_2801 PF04545 Sigma-70, region 4 AR1Y2_2801 PF04539 Sigma-70 region 3 AR1Y2_2802 PF13581 Histidine kinase-like ATPase domain AR1Y2_2803 PF01740 STAS domain AR1Y2_2806 PF08245 Mur ligase middle domain AR1Y2_2806 PF02875 Mur ligase family, glutamate ligase domain AR1Y2_2807 PF10458 Valyl tRNA synthetase tRNA binding arm AR1Y2_2807 PF08264 Anticodon-binding domain of tRNA AR1Y2_2807 PF00133 tRNA synthetases class I (I, L, M and V) AR1Y2_2812 PF00155 Aminotransferase class I and II AR1Y2_2817 PF00285 Citrate synthase, C-terminal domain AR1Y2_2818 PF00005 ABC transporter AR1Y2_2819 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_2820 PF00497 Bacterial extracellular solute-binding proteins, family 3 AR1Y2_2822 PF05036 Sporulation related domain AR1Y2_2822 PF08239 Bacterial SH3 domain AR1Y2_2822 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AR1Y2_2826 PF04539 Sigma-70 region 3 AR1Y2_2826 PF04542 Sigma-70 region 2 AR1Y2_2826 PF00140 Sigma-70 factor, region 1.2 AR1Y2_2826 PF03979 Sigma-70 factor, region 1.1 AR1Y2_2826 PF04545 Sigma-70, region 4 AR1Y2_2827 PF00290 Tryptophan synthase alpha chain AR1Y2_2828 PF00291 Pyridoxal-phosphate dependent enzyme AR1Y2_2829 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AR1Y2_2830 PF00218 Indole-3-glycerol phosphate synthase AR1Y2_2831 PF02885 Glycosyl transferase family, helical bundle domain AR1Y2_2831 PF00591 Glycosyl transferase family, a/b domain AR1Y2_2831 PF00117 Glutamine amidotransferase class-I AR1Y2_2833 PF00180 Isocitrate/isopropylmalate dehydrogenase AR1Y2_2834 PF02906 Iron only hydrogenase large subunit, C-terminal domain AR1Y2_2834 PF00037 4Fe-4S binding domain AR1Y2_2834 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AR1Y2_2834 PF02256 Iron hydrogenase small subunit AR1Y2_2835 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_2835 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AR1Y2_2836 PF00302 Chloramphenicol acetyltransferase AR1Y2_2837 PF02645 Uncharacterised protein, DegV family COG1307 AR1Y2_2840 PF13180 PDZ domain AR1Y2_2841 PF02397 Bacterial sugar transferase AR1Y2_2842 PF03816 Cell envelope-related transcriptional attenuator domain AR1Y2_2845 PF00072 Response regulator receiver domain AR1Y2_2845 PF08769 Sporulation initiation factor Spo0A C terminal AR1Y2_2846 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AR1Y2_2846 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AR1Y2_2847 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AR1Y2_2847 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AR1Y2_2848 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_2849 PF01575 MaoC like domain AR1Y2_2850 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2850 PF00107 Zinc-binding dehydrogenase AR1Y2_2851 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_2851 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AR1Y2_2852 PF02126 Phosphotriesterase family AR1Y2_2854 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AR1Y2_2854 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AR1Y2_2855 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_2856 PF03611 PTS system sugar-specific permease component AR1Y2_2859 PF00874 PRD domain AR1Y2_2859 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2859 PF08279 HTH domain AR1Y2_2859 PF05043 Mga helix-turn-helix domain AR1Y2_2860 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_2861 PF00107 Zinc-binding dehydrogenase AR1Y2_2861 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_2863 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_2863 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_2863 PF00563 EAL domain AR1Y2_2864 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AR1Y2_2865 PF00535 Glycosyl transferase family 2 AR1Y2_2868 PF00535 Glycosyl transferase family 2 AR1Y2_2868 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AR1Y2_2869 PF00483 Nucleotidyl transferase AR1Y2_2870 PF01467 Cytidylyltransferase-like AR1Y2_2871 PF00005 ABC transporter AR1Y2_2872 PF01061 ABC-2 type transporter AR1Y2_2874 PF00535 Glycosyl transferase family 2 AR1Y2_2874 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AR1Y2_2876 PF00535 Glycosyl transferase family 2 AR1Y2_2882 PF00535 Glycosyl transferase family 2 AR1Y2_2884 PF04230 Polysaccharide pyruvyl transferase AR1Y2_2888 PF02348 Cytidylyltransferase AR1Y2_2889 PF08666 SAF domain AR1Y2_2889 PF03102 NeuB family AR1Y2_2891 PF12804 MobA-like NTP transferase domain AR1Y2_2891 PF00132 Bacterial transferase hexapeptide (six repeats) AR1Y2_2892 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AR1Y2_2893 PF01370 NAD dependent epimerase/dehydratase family AR1Y2_2894 PF00535 Glycosyl transferase family 2 AR1Y2_2894 PF01501 Glycosyl transferase family 8 AR1Y2_2896 PF02397 Bacterial sugar transferase AR1Y2_2898 PF00082 Subtilase family AR1Y2_2900 PF09586 Bacterial membrane protein YfhO AR1Y2_2901 PF04138 GtrA-like protein AR1Y2_2903 PF00535 Glycosyl transferase family 2 AR1Y2_2904 PF07949 YbbR-like protein AR1Y2_2905 PF02457 DisA bacterial checkpoint controller nucleotide-binding AR1Y2_2910 PF01336 OB-fold nucleic acid binding domain AR1Y2_2910 PF00152 tRNA synthetases class II (D, K and N) AR1Y2_2911 PF03449 Transcription elongation factor, N-terminal AR1Y2_2911 PF01272 Transcription elongation factor, GreA/GreB, C-term AR1Y2_2912 PF00535 Glycosyl transferase family 2 AR1Y2_2913 PF01207 Dihydrouridine synthase (Dus) AR1Y2_2914 PF03309 Type III pantothenate kinase AR1Y2_2916 PF08279 HTH domain AR1Y2_2916 PF03099 Biotin/lipoate A/B protein ligase family AR1Y2_2916 PF02237 Biotin protein ligase C terminal domain AR1Y2_2917 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AR1Y2_2917 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AR1Y2_2919 PF00005 ABC transporter AR1Y2_2920 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_2922 PF01145 SPFH domain / Band 7 family AR1Y2_2924 PF08032 RNA 2'-O ribose methyltransferase substrate binding AR1Y2_2924 PF00588 SpoU rRNA Methylase family AR1Y2_2926 PF02386 Cation transport protein AR1Y2_2927 PF00365 Phosphofructokinase AR1Y2_2928 PF07733 Bacterial DNA polymerase III alpha NTPase domain AR1Y2_2928 PF14579 Helix-hairpin-helix motif AR1Y2_2928 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AR1Y2_2928 PF01336 OB-fold nucleic acid binding domain AR1Y2_2928 PF02811 PHP domain AR1Y2_2930 PF01225 Mur ligase family, catalytic domain AR1Y2_2930 PF02875 Mur ligase family, glutamate ligase domain AR1Y2_2930 PF08245 Mur ligase middle domain AR1Y2_2931 PF00860 Permease family AR1Y2_2932 PF12706 Beta-lactamase superfamily domain AR1Y2_2933 PF00209 Sodium:neurotransmitter symporter family AR1Y2_2934 PF00672 HAMP domain AR1Y2_2934 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2935 PF00072 Response regulator receiver domain AR1Y2_2935 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2938 PF00282 Pyridoxal-dependent decarboxylase conserved domain AR1Y2_2950 PF01476 LysM domain AR1Y2_2963 PF01797 Transposase IS200 like AR1Y2_2964 PF00381 PTS HPr component phosphorylation site AR1Y2_2965 PF10298 WhiA N-terminal LAGLIDADG-like domain AR1Y2_2965 PF02650 WhiA C-terminal HTH domain AR1Y2_2965 PF14527 WhiA LAGLIDADG-like domain AR1Y2_2966 PF03668 P-loop ATPase protein family AR1Y2_2967 PF01565 FAD binding domain AR1Y2_2967 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AR1Y2_2968 PF00480 ROK family AR1Y2_2969 PF07475 HPr Serine kinase C-terminal domain AR1Y2_2969 PF02603 HPr Serine kinase N terminus AR1Y2_2970 PF01541 GIY-YIG catalytic domain AR1Y2_2970 PF08459 UvrC Helix-hairpin-helix N-terminal AR1Y2_2970 PF12826 Helix-hairpin-helix motif AR1Y2_2970 PF02151 UvrB/uvrC motif AR1Y2_2971 PF12787 EcsC protein family AR1Y2_2975 PF05737 Collagen binding domain AR1Y2_2975 PF05738 Cna protein B-type domain AR1Y2_2975 PF17802 Prealbumin-like fold domain AR1Y2_2976 PF02796 Helix-turn-helix domain of resolvase AR1Y2_2976 PF00239 Resolvase, N terminal domain AR1Y2_2978 PF00072 Response regulator receiver domain AR1Y2_2978 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2979 PF00672 HAMP domain AR1Y2_2979 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2979 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2979 PF13426 PAS domain AR1Y2_2984 PF00571 CBS domain AR1Y2_2984 PF07085 DRTGG domain AR1Y2_2984 PF02833 DHHA2 domain AR1Y2_2984 PF01368 DHH family AR1Y2_2985 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_2985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_2986 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_2986 PF00072 Response regulator receiver domain AR1Y2_2989 PF01964 Radical SAM ThiC family AR1Y2_2990 PF00209 Sodium:neurotransmitter symporter family AR1Y2_2991 PF00923 Transaldolase/Fructose-6-phosphate aldolase AR1Y2_2994 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_2996 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2996 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_2997 PF00834 Ribulose-phosphate 3 epimerase family AR1Y2_2998 PF00874 PRD domain AR1Y2_2998 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_2998 PF05043 Mga helix-turn-helix domain AR1Y2_2998 PF08279 HTH domain AR1Y2_2999 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AR1Y2_2999 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AR1Y2_3000 PF00890 FAD binding domain AR1Y2_3001 PF02445 Quinolinate synthetase A protein AR1Y2_3004 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AR1Y2_3004 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AR1Y2_3005 PF00107 Zinc-binding dehydrogenase AR1Y2_3005 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_3006 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_3008 PF03610 PTS system fructose IIA component AR1Y2_3008 PF03830 PTS system sorbose subfamily IIB component AR1Y2_3009 PF03610 PTS system fructose IIA component AR1Y2_3010 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_3013 PF03466 LysR substrate binding domain AR1Y2_3013 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_3016 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_3019 PF03611 PTS system sugar-specific permease component AR1Y2_3020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3022 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3025 PF05043 Mga helix-turn-helix domain AR1Y2_3025 PF00874 PRD domain AR1Y2_3025 PF08279 HTH domain AR1Y2_3025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3029 PF10609 NUBPL iron-transfer P-loop NTPase AR1Y2_3030 PF00834 Ribulose-phosphate 3 epimerase family AR1Y2_3031 PF02690 Na+/Pi-cotransporter AR1Y2_3032 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3032 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3033 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3034 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3035 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_3038 PF01261 Xylose isomerase-like TIM barrel AR1Y2_3039 PF02733 Dak1 domain AR1Y2_3040 PF02734 DAK2 domain AR1Y2_3041 PF01418 Helix-turn-helix domain, rpiR family AR1Y2_3041 PF01380 SIS domain AR1Y2_3042 PF10371 Domain of unknown function AR1Y2_3042 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AR1Y2_3042 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AR1Y2_3042 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AR1Y2_3042 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AR1Y2_3043 PF02618 YceG-like family AR1Y2_3044 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AR1Y2_3046 PF17871 AAA lid domain AR1Y2_3046 PF07724 AAA domain (Cdc48 subfamily) AR1Y2_3046 PF00004 ATPase family associated with various cellular activities (AAA) AR1Y2_3046 PF10431 C-terminal, D2-small domain, of ClpB protein AR1Y2_3046 PF02861 Clp amino terminal domain, pathogenicity island component AR1Y2_3047 PF17932 Tetracyclin repressor-like, C-terminal domain AR1Y2_3047 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_3048 PF07690 Major Facilitator Superfamily AR1Y2_3049 PF03749 Sugar fermentation stimulation protein RE domain AR1Y2_3049 PF17746 SfsA N-terminal OB domain AR1Y2_3052 PF00005 ABC transporter AR1Y2_3053 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_3056 PF01228 Glycine radical AR1Y2_3056 PF02901 Pyruvate formate lyase-like AR1Y2_3058 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AR1Y2_3058 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AR1Y2_3060 PF02028 BCCT, betaine/carnitine/choline family transporter AR1Y2_3061 PF12833 Helix-turn-helix domain AR1Y2_3061 PF02311 AraC-like ligand binding domain AR1Y2_3062 PF13187 4Fe-4S dicluster domain AR1Y2_3062 PF04055 Radical SAM superfamily AR1Y2_3064 PF16925 Tetracyclin repressor-like, C-terminal domain AR1Y2_3064 PF00440 Bacterial regulatory proteins, tetR family AR1Y2_3066 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AR1Y2_3066 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AR1Y2_3066 PF10371 Domain of unknown function AR1Y2_3066 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AR1Y2_3066 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AR1Y2_3067 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal AR1Y2_3067 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal AR1Y2_3068 PF13426 PAS domain AR1Y2_3068 PF02954 Bacterial regulatory protein, Fis family AR1Y2_3068 PF00158 Sigma-54 interaction domain AR1Y2_3070 PF00465 Iron-containing alcohol dehydrogenase AR1Y2_3071 PF01554 MatE AR1Y2_3072 PF04474 Protein of unknown function (DUF554) AR1Y2_3075 PF00083 Sugar (and other) transporter AR1Y2_3075 PF07690 Major Facilitator Superfamily AR1Y2_3076 PF02796 Helix-turn-helix domain of resolvase AR1Y2_3076 PF00239 Resolvase, N terminal domain AR1Y2_3078 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_3078 PF00563 EAL domain AR1Y2_3078 PF13426 PAS domain AR1Y2_3080 PF02811 PHP domain AR1Y2_3081 PF14667 Polysaccharide biosynthesis C-terminal domain AR1Y2_3081 PF01943 Polysaccharide biosynthesis protein AR1Y2_3082 PF01134 Glucose inhibited division protein A AR1Y2_3082 PF13932 GidA associated domain AR1Y2_3084 PF01232 Mannitol dehydrogenase Rossmann domain AR1Y2_3084 PF08125 Mannitol dehydrogenase C-terminal domain AR1Y2_3085 PF01380 SIS domain AR1Y2_3086 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AR1Y2_3087 PF08125 Mannitol dehydrogenase C-terminal domain AR1Y2_3087 PF01232 Mannitol dehydrogenase Rossmann domain AR1Y2_3088 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3089 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3089 PF00874 PRD domain AR1Y2_3089 PF05043 Mga helix-turn-helix domain AR1Y2_3089 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3089 PF08279 HTH domain AR1Y2_3090 PF02378 Phosphotransferase system, EIIC AR1Y2_3090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3091 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3091 PF00455 DeoR C terminal sensor domain AR1Y2_3092 PF00107 Zinc-binding dehydrogenase AR1Y2_3092 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_3094 PF02378 Phosphotransferase system, EIIC AR1Y2_3094 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3094 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3095 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3095 PF00455 DeoR C terminal sensor domain AR1Y2_3096 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_3096 PF00107 Zinc-binding dehydrogenase AR1Y2_3100 PF02734 DAK2 domain AR1Y2_3101 PF02733 Dak1 domain AR1Y2_3102 PF01261 Xylose isomerase-like TIM barrel AR1Y2_3103 PF02502 Ribose/Galactose Isomerase AR1Y2_3104 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_3107 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3108 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3108 PF02378 Phosphotransferase system, EIIC AR1Y2_3108 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3109 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_3111 PF00877 NlpC/P60 family AR1Y2_3112 PF02645 Uncharacterised protein, DegV family COG1307 AR1Y2_3113 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AR1Y2_3113 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AR1Y2_3113 PF06827 Zinc finger found in FPG and IleRS AR1Y2_3114 PF02796 Helix-turn-helix domain of resolvase AR1Y2_3114 PF00239 Resolvase, N terminal domain AR1Y2_3115 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_3115 PF17151 Periplasmic sensor domain AR1Y2_3120 PF00005 ABC transporter AR1Y2_3120 PF17850 CysA C-terminal regulatory domain AR1Y2_3120 PF12857 TOBE-like domain AR1Y2_3121 PF02525 Flavodoxin-like fold AR1Y2_3122 PF00877 NlpC/P60 family AR1Y2_3123 PF01797 Transposase IS200 like AR1Y2_3124 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AR1Y2_3125 PF00814 Glycoprotease family AR1Y2_3126 PF12706 Beta-lactamase superfamily domain AR1Y2_3127 PF00583 Acetyltransferase (GNAT) family AR1Y2_3128 PF00814 Glycoprotease family AR1Y2_3129 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AR1Y2_3131 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AR1Y2_3131 PF15714 Stage V sporulation protein T C-terminal, transcription factor AR1Y2_3132 PF17755 UvrA DNA-binding domain AR1Y2_3132 PF17760 UvrA interaction domain AR1Y2_3133 PF04851 Type III restriction enzyme, res subunit AR1Y2_3133 PF17757 UvrB interaction domain AR1Y2_3133 PF12344 Ultra-violet resistance protein B AR1Y2_3133 PF00271 Helicase conserved C-terminal domain AR1Y2_3133 PF02151 UvrB/uvrC motif AR1Y2_3135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AR1Y2_3135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AR1Y2_3138 PF01627 Hpt domain AR1Y2_3138 PF00672 HAMP domain AR1Y2_3138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_3138 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_3138 PF00072 Response regulator receiver domain AR1Y2_3138 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AR1Y2_3139 PF00563 EAL domain AR1Y2_3139 PF00990 Diguanylate cyclase, GGDEF domain AR1Y2_3139 PF03707 Bacterial signalling protein N terminal repeat AR1Y2_3142 PF03572 Peptidase family S41 AR1Y2_3142 PF01471 Putative peptidoglycan binding domain AR1Y2_3142 PF17820 PDZ domain AR1Y2_3144 PF01144 Coenzyme A transferase AR1Y2_3145 PF01575 MaoC like domain AR1Y2_3146 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AR1Y2_3146 PF03466 LysR substrate binding domain AR1Y2_3147 PF04225 Opacity-associated protein A LysM-like domain AR1Y2_3147 PF01551 Peptidase family M23 AR1Y2_3148 PF02687 FtsX-like permease family AR1Y2_3148 PF18075 FtsX extracellular domain AR1Y2_3149 PF00005 ABC transporter AR1Y2_3150 PF05651 Putative sugar diacid recognition AR1Y2_3150 PF17853 GGDEF-like domain AR1Y2_3150 PF13556 PucR C-terminal helix-turn-helix domain AR1Y2_3151 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AR1Y2_3151 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AR1Y2_3154 PF00575 S1 RNA binding domain AR1Y2_3154 PF09371 Tex-like protein N-terminal domain AR1Y2_3154 PF17674 HHH domain AR1Y2_3154 PF16921 Tex protein YqgF-like domain AR1Y2_3155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AR1Y2_3156 PF00696 Amino acid kinase family AR1Y2_3156 PF13840 ACT domain AR1Y2_3157 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AR1Y2_3157 PF01676 Metalloenzyme superfamily AR1Y2_3158 PF01842 ACT domain AR1Y2_3158 PF00742 Homoserine dehydrogenase AR1Y2_3158 PF03447 Homoserine dehydrogenase, NAD binding domain AR1Y2_3161 PF12671 Putative amidase domain AR1Y2_3163 PF03462 PCRF domain AR1Y2_3163 PF00472 RF-1 domain AR1Y2_3164 PF07516 SecA Wing and Scaffold domain AR1Y2_3164 PF01043 SecA preprotein cross-linking domain AR1Y2_3164 PF07517 SecA DEAD-like domain AR1Y2_3164 PF02810 SEC-C motif AR1Y2_3165 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AR1Y2_3165 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AR1Y2_3166 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_3167 PF00085 Thioredoxin AR1Y2_3168 PF00892 EamA-like transporter family AR1Y2_3169 PF12833 Helix-turn-helix domain AR1Y2_3169 PF02311 AraC-like ligand binding domain AR1Y2_3170 PF01022 Bacterial regulatory protein, arsR family AR1Y2_3172 PF00860 Permease family AR1Y2_3176 PF02308 MgtC family AR1Y2_3177 PF14602 Hexapeptide repeat of succinyl-transferase AR1Y2_3177 PF12464 Maltose acetyltransferase AR1Y2_3179 PF01713 Smr domain AR1Y2_3179 PF00488 MutS domain V AR1Y2_3181 PF03747 ADP-ribosylglycohydrolase AR1Y2_3182 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_3182 PF02378 Phosphotransferase system, EIIC AR1Y2_3182 PF00367 phosphotransferase system, EIIB AR1Y2_3184 PF02378 Phosphotransferase system, EIIC AR1Y2_3184 PF00367 phosphotransferase system, EIIB AR1Y2_3184 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_3187 PF00380 Ribosomal protein S9/S16 AR1Y2_3188 PF00572 Ribosomal protein L13 AR1Y2_3189 PF13597 Anaerobic ribonucleoside-triphosphate reductase AR1Y2_3189 PF03477 ATP cone domain AR1Y2_3190 PF04055 Radical SAM superfamily AR1Y2_3190 PF06463 Molybdenum Cofactor Synthesis C AR1Y2_3192 PF02361 Cobalt transport protein AR1Y2_3193 PF00005 ABC transporter AR1Y2_3194 PF00005 ABC transporter AR1Y2_3196 PF01196 Ribosomal protein L17 AR1Y2_3198 PF01479 S4 domain AR1Y2_3198 PF00163 Ribosomal protein S4/S9 N-terminal domain AR1Y2_3199 PF00411 Ribosomal protein S11 AR1Y2_3200 PF00416 Ribosomal protein S13/S18 AR1Y2_3201 PF00444 Ribosomal protein L36 AR1Y2_3202 PF01176 Translation initiation factor 1A / IF-1 AR1Y2_3203 PF00557 Metallopeptidase family M24 AR1Y2_3204 PF05191 Adenylate kinase, active site lid AR1Y2_3205 PF00344 SecY translocase AR1Y2_3206 PF00344 SecY translocase AR1Y2_3207 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AR1Y2_3208 PF00327 Ribosomal protein L30p/L7e AR1Y2_3209 PF03719 Ribosomal protein S5, C-terminal domain AR1Y2_3209 PF00333 Ribosomal protein S5, N-terminal domain AR1Y2_3210 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AR1Y2_3211 PF00347 Ribosomal protein L6 AR1Y2_3212 PF00410 Ribosomal protein S8 AR1Y2_3213 PF00673 ribosomal L5P family C-terminus AR1Y2_3213 PF00281 Ribosomal protein L5 AR1Y2_3214 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AR1Y2_3214 PF00467 KOW motif AR1Y2_3215 PF00238 Ribosomal protein L14p/L23e AR1Y2_3216 PF00366 Ribosomal protein S17 AR1Y2_3217 PF00831 Ribosomal L29 protein AR1Y2_3218 PF00252 Ribosomal protein L16p/L10e AR1Y2_3219 PF00189 Ribosomal protein S3, C-terminal domain AR1Y2_3219 PF07650 KH domain AR1Y2_3220 PF00237 Ribosomal protein L22p/L17e AR1Y2_3221 PF00203 Ribosomal protein S19 AR1Y2_3222 PF00181 Ribosomal Proteins L2, RNA binding domain AR1Y2_3222 PF03947 Ribosomal Proteins L2, C-terminal domain AR1Y2_3223 PF00276 Ribosomal protein L23 AR1Y2_3224 PF00573 Ribosomal protein L4/L1 family AR1Y2_3225 PF00297 Ribosomal protein L3 AR1Y2_3226 PF00338 Ribosomal protein S10p/S20e AR1Y2_3229 PF00248 Aldo/keto reductase family AR1Y2_3231 PF02734 DAK2 domain AR1Y2_3232 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AR1Y2_3233 PF02733 Dak1 domain AR1Y2_3234 PF01380 SIS domain AR1Y2_3235 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3235 PF00455 DeoR C terminal sensor domain AR1Y2_3238 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AR1Y2_3239 PF01039 Carboxyl transferase domain AR1Y2_3239 PF17848 Acetyl-coA carboxylase zinc finger domain AR1Y2_3240 PF02785 Biotin carboxylase C-terminal domain AR1Y2_3240 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AR1Y2_3240 PF00289 Biotin carboxylase, N-terminal domain AR1Y2_3241 PF07977 FabA-like domain AR1Y2_3242 PF00364 Biotin-requiring enzyme AR1Y2_3243 PF00109 Beta-ketoacyl synthase, N-terminal domain AR1Y2_3243 PF02801 Beta-ketoacyl synthase, C-terminal domain AR1Y2_3245 PF00698 Acyl transferase domain AR1Y2_3247 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_3247 PF00107 Zinc-binding dehydrogenase AR1Y2_3248 PF00005 ABC transporter AR1Y2_3252 PF02915 Rubrerythrin AR1Y2_3254 PF00271 Helicase conserved C-terminal domain AR1Y2_3254 PF00270 DEAD/DEAH box helicase AR1Y2_3256 PF02001 Protein of unknown function DUF134 AR1Y2_3257 PF03006 Haemolysin-III related AR1Y2_3258 PF01541 GIY-YIG catalytic domain AR1Y2_3260 PF08486 Stage II sporulation protein AR1Y2_3262 PF08264 Anticodon-binding domain of tRNA AR1Y2_3262 PF00133 tRNA synthetases class I (I, L, M and V) AR1Y2_3264 PF00756 Putative esterase AR1Y2_3265 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_3266 PF03609 PTS system sorbose-specific iic component AR1Y2_3267 PF03830 PTS system sorbose subfamily IIB component AR1Y2_3269 PF03610 PTS system fructose IIA component AR1Y2_3269 PF00874 PRD domain AR1Y2_3269 PF00158 Sigma-54 interaction domain AR1Y2_3271 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AR1Y2_3271 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AR1Y2_3271 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AR1Y2_3272 PF01553 Acyltransferase AR1Y2_3274 PF00874 PRD domain AR1Y2_3274 PF08279 HTH domain AR1Y2_3274 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3274 PF05043 Mga helix-turn-helix domain AR1Y2_3276 PF03611 PTS system sugar-specific permease component AR1Y2_3277 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3278 PF08240 Alcohol dehydrogenase GroES-like domain AR1Y2_3278 PF00107 Zinc-binding dehydrogenase AR1Y2_3281 PF00294 pfkB family carbohydrate kinase AR1Y2_3283 PF00977 Histidine biosynthesis protein AR1Y2_3284 PF00849 RNA pseudouridylate synthase AR1Y2_3285 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_3285 PF00072 Response regulator receiver domain AR1Y2_3286 PF00989 PAS fold AR1Y2_3286 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_3286 PF16736 Single Cache-like AR1Y2_3286 PF00512 His Kinase A (phospho-acceptor) domain AR1Y2_3287 PF04127 DNA / pantothenate metabolism flavoprotein AR1Y2_3287 PF02441 Flavoprotein AR1Y2_3288 PF02261 Aspartate decarboxylase AR1Y2_3290 PF02548 Ketopantoate hydroxymethyltransferase AR1Y2_3295 PF02632 BioY family AR1Y2_3299 PF04055 Radical SAM superfamily AR1Y2_3300 PF02901 Pyruvate formate lyase-like AR1Y2_3300 PF01228 Glycine radical AR1Y2_3301 PF00302 Chloramphenicol acetyltransferase AR1Y2_3303 PF00005 ABC transporter AR1Y2_3303 PF12848 ABC transporter AR1Y2_3306 PF00455 DeoR C terminal sensor domain AR1Y2_3306 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3307 PF01380 SIS domain AR1Y2_3307 PF01418 Helix-turn-helix domain, rpiR family AR1Y2_3308 PF01418 Helix-turn-helix domain, rpiR family AR1Y2_3308 PF01380 SIS domain AR1Y2_3309 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AR1Y2_3309 PF00367 phosphotransferase system, EIIB AR1Y2_3309 PF02378 Phosphotransferase system, EIIC AR1Y2_3310 PF02056 Family 4 glycosyl hydrolase AR1Y2_3310 PF11975 Family 4 glycosyl hydrolase C-terminal domain AR1Y2_3312 PF02378 Phosphotransferase system, EIIC AR1Y2_3312 PF00367 phosphotransferase system, EIIB AR1Y2_3313 PF03477 ATP cone domain AR1Y2_3313 PF02867 Ribonucleotide reductase, barrel domain AR1Y2_3313 PF00317 Ribonucleotide reductase, all-alpha domain AR1Y2_3314 PF00268 Ribonucleotide reductase, small chain AR1Y2_3315 PF12833 Helix-turn-helix domain AR1Y2_3315 PF06445 GyrI-like small molecule binding domain AR1Y2_3316 PF08460 Bacterial SH3 domain AR1Y2_3316 PF05257 CHAP domain AR1Y2_3316 PF01520 N-acetylmuramoyl-L-alanine amidase AR1Y2_3319 PF01522 Polysaccharide deacetylase AR1Y2_3319 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain AR1Y2_3320 PF13382 Adenine deaminase C-terminal domain AR1Y2_3320 PF01979 Amidohydrolase family AR1Y2_3321 PF00438 S-adenosylmethionine synthetase, N-terminal domain AR1Y2_3321 PF02772 S-adenosylmethionine synthetase, central domain AR1Y2_3321 PF02773 S-adenosylmethionine synthetase, C-terminal domain AR1Y2_3323 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AR1Y2_3324 PF01202 Shikimate kinase AR1Y2_3325 PF01613 Flavin reductase like domain AR1Y2_3326 PF01230 HIT domain AR1Y2_3328 PF02132 RecR protein AR1Y2_3328 PF13662 Toprim domain AR1Y2_3329 PF02575 YbaB/EbfC DNA-binding family AR1Y2_3330 PF12169 DNA polymerase III subunits gamma and tau domain III AR1Y2_3331 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_3331 PF00989 PAS fold AR1Y2_3331 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AR1Y2_3331 PF17203 Single cache domain 3 AR1Y2_3332 PF01694 Rhomboid family AR1Y2_3340 PF00437 Type II/IV secretion system protein AR1Y2_3343 PF00290 Tryptophan synthase alpha chain AR1Y2_3344 PF03611 PTS system sugar-specific permease component AR1Y2_3346 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3348 PF06207 Protein of unknown function (DUF1002) AR1Y2_3351 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AR1Y2_3351 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AR1Y2_3353 PF00005 ABC transporter AR1Y2_3354 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_3355 PF00497 Bacterial extracellular solute-binding proteins, family 3 AR1Y2_3356 PF03180 NLPA lipoprotein AR1Y2_3357 PF14815 NUDIX domain AR1Y2_3357 PF00730 HhH-GPD superfamily base excision DNA repair protein AR1Y2_3361 PF01116 Fructose-bisphosphate aldolase class-II AR1Y2_3364 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AR1Y2_3364 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AR1Y2_3365 PF03608 PTS system enzyme II sorbitol-specific factor AR1Y2_3367 PF04198 Putative sugar-binding domain AR1Y2_3368 PF00202 Aminotransferase class-III AR1Y2_3370 PF00455 DeoR C terminal sensor domain AR1Y2_3370 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3371 PF03610 PTS system fructose IIA component AR1Y2_3371 PF03830 PTS system sorbose subfamily IIB component AR1Y2_3372 PF03609 PTS system sorbose-specific iic component AR1Y2_3374 PF00455 DeoR C terminal sensor domain AR1Y2_3374 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3375 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AR1Y2_3375 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AR1Y2_3379 PF14490 Helix-hairpin-helix containing domain AR1Y2_3379 PF13538 UvrD-like helicase C-terminal domain AR1Y2_3379 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AR1Y2_3381 PF02926 THUMP domain AR1Y2_3381 PF01170 Putative RNA methylase family UPF0020 AR1Y2_3381 PF10672 S-adenosylmethionine-dependent methyltransferase AR1Y2_3382 PF00128 Alpha amylase, catalytic domain AR1Y2_3382 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AR1Y2_3383 PF11738 Protein of unknown function (DUF3298) AR1Y2_3383 PF01522 Polysaccharide deacetylase AR1Y2_3383 PF13739 Deacetylase PdaC AR1Y2_3384 PF00072 Response regulator receiver domain AR1Y2_3385 PF00923 Transaldolase/Fructose-6-phosphate aldolase AR1Y2_3386 PF04198 Putative sugar-binding domain AR1Y2_3390 PF04011 LemA family AR1Y2_3393 PF02915 Rubrerythrin AR1Y2_3397 PF00571 CBS domain AR1Y2_3397 PF03471 Transporter associated domain AR1Y2_3397 PF01595 Cyclin M transmembrane N-terminal domain AR1Y2_3399 PF03061 Thioesterase superfamily AR1Y2_3401 PF02515 CoA-transferase family III AR1Y2_3403 PF01012 Electron transfer flavoprotein domain AR1Y2_3404 PF01012 Electron transfer flavoprotein domain AR1Y2_3404 PF00766 Electron transfer flavoprotein FAD-binding domain AR1Y2_3405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AR1Y2_3405 PF02770 Acyl-CoA dehydrogenase, middle domain AR1Y2_3405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AR1Y2_3408 PF13411 MerR HTH family regulatory protein AR1Y2_3409 PF07687 Peptidase dimerisation domain AR1Y2_3409 PF01546 Peptidase family M20/M25/M40 AR1Y2_3412 PF01979 Amidohydrolase family AR1Y2_3413 PF01180 Dihydroorotate dehydrogenase AR1Y2_3414 PF07992 Pyridine nucleotide-disulphide oxidoreductase AR1Y2_3414 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AR1Y2_3415 PF06496 Protein of unknown function (DUF1097) AR1Y2_3418 PF00005 ABC transporter AR1Y2_3426 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_3427 PF03609 PTS system sorbose-specific iic component AR1Y2_3428 PF03830 PTS system sorbose subfamily IIB component AR1Y2_3428 PF03610 PTS system fructose IIA component AR1Y2_3430 PF00158 Sigma-54 interaction domain AR1Y2_3430 PF00874 PRD domain AR1Y2_3430 PF03610 PTS system fructose IIA component AR1Y2_3432 PF01554 MatE AR1Y2_3433 PF13419 Haloacid dehalogenase-like hydrolase AR1Y2_3434 PF03613 PTS system mannose/fructose/sorbose family IID component AR1Y2_3435 PF03609 PTS system sorbose-specific iic component AR1Y2_3436 PF03830 PTS system sorbose subfamily IIB component AR1Y2_3438 PF13580 SIS domain AR1Y2_3439 PF01380 SIS domain AR1Y2_3440 PF07702 UTRA domain AR1Y2_3440 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_3444 PF02661 Fic/DOC family AR1Y2_3445 PF03144 Elongation factor Tu domain 2 AR1Y2_3445 PF00009 Elongation factor Tu GTP binding domain AR1Y2_3445 PF03143 Elongation factor Tu C-terminal domain AR1Y2_3446 PF00679 Elongation factor G C-terminus AR1Y2_3446 PF03764 Elongation factor G, domain IV AR1Y2_3446 PF03144 Elongation factor Tu domain 2 AR1Y2_3446 PF14492 Elongation Factor G, domain II AR1Y2_3446 PF00009 Elongation factor Tu GTP binding domain AR1Y2_3447 PF00177 Ribosomal protein S7p/S5e AR1Y2_3448 PF04997 RNA polymerase Rpb1, domain 1 AR1Y2_3448 PF00623 RNA polymerase Rpb1, domain 2 AR1Y2_3448 PF04983 RNA polymerase Rpb1, domain 3 AR1Y2_3448 PF05000 RNA polymerase Rpb1, domain 4 AR1Y2_3448 PF04998 RNA polymerase Rpb1, domain 5 AR1Y2_3450 PF00542 Ribosomal protein L7/L12 C-terminal domain AR1Y2_3450 PF16320 Ribosomal protein L7/L12 dimerisation domain AR1Y2_3451 PF00466 Ribosomal protein L10 AR1Y2_3456 PF00005 ABC transporter AR1Y2_3457 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_3458 PF00528 Binding-protein-dependent transport system inner membrane component AR1Y2_3459 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AR1Y2_3460 PF17961 Bacterial Ig domain AR1Y2_3460 PF04650 YSIRK type signal peptide AR1Y2_3460 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AR1Y2_3460 PF17210 SdrD B-like domain AR1Y2_3460 PF00746 LPXTG cell wall anchor motif AR1Y2_3461 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AR1Y2_3462 PF04321 RmlD substrate binding domain AR1Y2_3463 PF16363 GDP-mannose 4,6 dehydratase AR1Y2_3464 PF00483 Nucleotidyl transferase AR1Y2_3466 PF00376 MerR family regulatory protein AR1Y2_3466 PF09278 MerR, DNA binding AR1Y2_3480 PF00298 Ribosomal protein L11, RNA binding domain AR1Y2_3480 PF03946 Ribosomal protein L11, N-terminal domain AR1Y2_3481 PF00467 KOW motif AR1Y2_3481 PF02357 Transcription termination factor nusG AR1Y2_3483 PF00471 Ribosomal protein L33 AR1Y2_3486 PF03477 ATP cone domain AR1Y2_3486 PF13597 Anaerobic ribonucleoside-triphosphate reductase AR1Y2_3489 PF03323 Bacillus/Clostridium GerA spore germination protein AR1Y2_3490 PF00392 Bacterial regulatory proteins, gntR family AR1Y2_3490 PF07729 FCD domain AR1Y2_3491 PF08544 GHMP kinases C terminal AR1Y2_3491 PF00288 GHMP kinases N terminal domain AR1Y2_3492 PF01476 LysM domain AR1Y2_3492 PF00877 NlpC/P60 family AR1Y2_3492 PF08239 Bacterial SH3 domain AR1Y2_3493 PF06257 Biofilm formation stimulator VEG AR1Y2_3494 PF01434 Peptidase family M41 AR1Y2_3494 PF17862 AAA+ lid domain AR1Y2_3494 PF00004 ATPase family associated with various cellular activities (AAA) AR1Y2_3494 PF06480 FtsH Extracellular AR1Y2_3496 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AR1Y2_3496 PF02885 Glycosyl transferase family, helical bundle domain AR1Y2_3496 PF00591 Glycosyl transferase family, a/b domain AR1Y2_3497 PF02915 Rubrerythrin AR1Y2_3502 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AR1Y2_3502 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AR1Y2_3502 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AR1Y2_3502 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AR1Y2_3505 PF00692 dUTPase AR1Y2_3506 PF00342 Phosphoglucose isomerase AR1Y2_3507 PF01522 Polysaccharide deacetylase AR1Y2_3509 PF01048 Phosphorylase superfamily AR1Y2_3511 PF03033 Glycosyltransferase family 28 N-terminal domain AR1Y2_3511 PF04101 Glycosyltransferase family 28 C-terminal domain AR1Y2_3513 PF01965 DJ-1/PfpI family AR1Y2_3513 PF12833 Helix-turn-helix domain AR1Y2_3515 PF01261 Xylose isomerase-like TIM barrel AR1Y2_3516 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AR1Y2_3516 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AR1Y2_3517 PF01261 Xylose isomerase-like TIM barrel AR1Y2_3518 PF07739 TipAS antibiotic-recognition domain AR1Y2_3518 PF13411 MerR HTH family regulatory protein AR1Y2_3519 PF02311 AraC-like ligand binding domain AR1Y2_3519 PF12833 Helix-turn-helix domain AR1Y2_3522 PF00664 ABC transporter transmembrane region AR1Y2_3522 PF00005 ABC transporter AR1Y2_3523 PF00005 ABC transporter AR1Y2_3523 PF00664 ABC transporter transmembrane region AR1Y2_3524 PF13344 Haloacid dehalogenase-like hydrolase AR1Y2_3525 PF00596 Class II Aldolase and Adducin N-terminal domain AR1Y2_3526 PF13685 Iron-containing alcohol dehydrogenase AR1Y2_3527 PF03611 PTS system sugar-specific permease component AR1Y2_3530 PF00874 PRD domain AR1Y2_3530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3530 PF05043 Mga helix-turn-helix domain AR1Y2_3530 PF08279 HTH domain AR1Y2_3531 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AR1Y2_3531 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AR1Y2_3532 PF00294 pfkB family carbohydrate kinase AR1Y2_3533 PF08220 DeoR-like helix-turn-helix domain AR1Y2_3533 PF00455 DeoR C terminal sensor domain AR1Y2_3537 PF00005 ABC transporter AR1Y2_3540 PF01590 GAF domain AR1Y2_3540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AR1Y2_3540 PF08446 PAS fold AR1Y2_3540 PF00360 Phytochrome region AR1Y2_3541 PF00072 Response regulator receiver domain AR1Y2_3541 PF00486 Transcriptional regulatory protein, C terminal AR1Y2_3542 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AR1Y2_3542 PF02403 Seryl-tRNA synthetase N-terminal domain AR1Y2_3544 PF17762 HTH domain found in ParB protein AR1Y2_3544 PF02195 ParB-like nuclease domain AR1Y2_3545 PF13614 AAA domain AR1Y2_3549 PF02527 rRNA small subunit methyltransferase G AR1Y2_3550 PF01134 Glucose inhibited division protein A AR1Y2_3550 PF13932 GidA associated domain AR1Y2_3551 PF01926 50S ribosome-binding GTPase AR1Y2_3551 PF12631 MnmE helical domain AR1Y2_3551 PF10396 GTP-binding protein TrmE N-terminus AR1Y2_3552 PF14804 Jag N-terminus AR1Y2_3552 PF01424 R3H domain AR1Y2_3553 PF02096 60Kd inner membrane protein AR1Y2_3554 PF01809 Putative membrane protein insertion efficiency factor AR1Y2_3555 PF00825 Ribonuclease P AR1Y2_3556 PF00468 Ribosomal protein L34