CPRO_00010 PF00308 Bacterial dnaA protein CPRO_00010 PF08299 Bacterial dnaA protein helix-turn-helix CPRO_00010 PF11638 DnaA N-terminal domain CPRO_00020 PF00712 DNA polymerase III beta subunit, N-terminal domain CPRO_00020 PF02767 DNA polymerase III beta subunit, central domain CPRO_00020 PF02768 DNA polymerase III beta subunit, C-terminal domain CPRO_00030 PF13275 S4 domain CPRO_00040 PF02463 RecF/RecN/SMC N terminal domain CPRO_00050 PF00204 DNA gyrase B CPRO_00050 PF00986 DNA gyrase B subunit, carboxyl terminus CPRO_00050 PF01751 Toprim domain CPRO_00050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_00060 PF00521 DNA gyrase/topoisomerase IV, subunit A CPRO_00060 PF03989 DNA gyrase C-terminal domain, beta-propeller CPRO_00080 PF09587 Bacterial capsule synthesis protein PGA_cap CPRO_00090 PF00392 Bacterial regulatory proteins, gntR family CPRO_00090 PF07729 FCD domain CPRO_00120 PF00781 Diacylglycerol kinase catalytic domain CPRO_00130 PF13614 AAA domain CPRO_00140 PF02195 ParB-like nuclease domain CPRO_00150 PF14584 CPRO_00150 CPRO_00160 PF08282 haloacid dehalogenase-like hydrolase CPRO_00170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_00170 PF02403 Seryl-tRNA synthetase N-terminal domain CPRO_00190 PF00893 Small Multidrug Resistance protein CPRO_00200 PF04402 Protein of unknown function (DUF541) CPRO_00210 PF00294 pfkB family carbohydrate kinase CPRO_00220 PF13303 CPRO_00220 CPRO_00230 PF12116 Stage III sporulation protein D CPRO_00250 PF01880 Desulfoferrodoxin CPRO_00250 PF06397 Desulfoferrodoxin, N-terminal domain CPRO_00260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_00270 PF02915 Rubrerythrin CPRO_00280 PF01678 Diaminopimelate epimerase CPRO_00280 PF02142 MGS-like domain CPRO_00280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_00280 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPRO_00290 PF00117 Glutamine amidotransferase class-I CPRO_00290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CPRO_00300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPRO_00300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPRO_00310 PF00202 Aminotransferase class-III CPRO_00320 PF00696 Amino acid kinase family CPRO_00330 PF01960 ArgJ family CPRO_00340 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPRO_00350 PF00248 Aldo/keto reductase family CPRO_00360 PF01070 FMN-dependent dehydrogenase CPRO_00370 PF02517 CAAX protease self-immunity CPRO_00380 PF00152 tRNA synthetases class II (D, K and N) CPRO_00380 PF01336 OB-fold nucleic acid binding domain CPRO_00390 PF01625 Peptide methionine sulfoxide reductase CPRO_00390 PF01641 SelR domain CPRO_00400 PF00795 Carbon-nitrogen hydrolase CPRO_00410 PF00209 Sodium:neurotransmitter symporter family CPRO_00420 PF03313 CPRO_00420 CPRO_00430 PF01235 CPRO_00430 CPRO_00450 PF07009 Protein of unknown function (DUF1312) CPRO_00460 PF07456 CPRO_00460 CPRO_00470 PF00478 IMP dehydrogenase / GMP reductase domain CPRO_00470 PF00571 CBS domain CPRO_00480 PF13370 4Fe-4S single cluster domain CPRO_00490 PF05656 CPRO_00490 CPRO_00510 PF00122 E1-E2 ATPase CPRO_00510 PF00689 Cation transporting ATPase, C-terminus CPRO_00510 PF00690 Cation transporter/ATPase, N-terminus CPRO_00510 PF13246 Putative hydrolase of sodium-potassium ATPase alpha subunit CPRO_00520 PF00575 S1 RNA binding domain CPRO_00520 PF09371 Tex-like protein N-terminal domain CPRO_00520 PF12836 Helix-hairpin-helix motif CPRO_00520 PF16921 CPRO_00520 CPRO_00530 PF00753 Metallo-beta-lactamase superfamily CPRO_00540 PF01381 Helix-turn-helix CPRO_00570 PF01250 Ribosomal protein S6 CPRO_00580 PF00436 Single-strand binding protein family CPRO_00590 PF01084 Ribosomal protein S18 CPRO_00600 PF12822 Protein of unknown function (DUF3816) CPRO_00610 PF01820 D-ala D-ala ligase N-terminus CPRO_00610 PF07478 D-ala D-ala ligase C-terminus CPRO_00620 PF01177 Asp/Glu/Hydantoin racemase CPRO_00630 PF00072 Response regulator receiver domain CPRO_00630 PF01966 HD domain CPRO_00640 PF01627 Hpt domain CPRO_00650 PF00085 Thioredoxin CPRO_00670 PF02652 CPRO_00670 CPRO_00680 PF00056 lactate/malate dehydrogenase, NAD binding domain CPRO_00680 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CPRO_00690 PF05762 VWA domain containing CoxE-like protein CPRO_00700 PF07728 AAA domain (dynein-related subfamily) CPRO_00710 PF04014 Antidote-toxin recognition MazE CPRO_00720 PF07670 Nucleoside recognition CPRO_00740 PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella CPRO_00750 PF14437 CPRO_00750 CPRO_00770 PF12169 DNA polymerase III subunits gamma and tau domain III CPRO_00770 PF13177 DNA polymerase III, delta subunit CPRO_00780 PF02575 YbaB/EbfC DNA-binding family CPRO_00790 PF02132 RecR protein CPRO_00790 PF13662 Toprim domain CPRO_00800 PF12821 CPRO_00800 CPRO_00810 PF06738 CPRO_00810 CPRO_00820 PF03070 TENA/THI-4/PQQC family CPRO_00830 PF00005 ABC transporter CPRO_00840 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_00850 PF09084 NMT1/THI5 like CPRO_00860 PF00106 short chain dehydrogenase CPRO_00870 PF03631 CPRO_00870 CPRO_00880 PF07833 Copper amine oxidase N-terminal domain CPRO_00890 PF07833 Copper amine oxidase N-terminal domain CPRO_00900 PF02321 Outer membrane efflux protein CPRO_00910 PF03323 CPRO_00910 CPRO_00920 PF03845 CPRO_00920 CPRO_00930 PF05504 Spore germination B3/ GerAC like, C-terminal CPRO_00940 PF09551 CPRO_00940 CPRO_00950 PF06961 CPRO_00950 CPRO_00960 PF02142 MGS-like domain CPRO_00970 PF01098 CPRO_00970 CPRO_00980 PF03776 Septum formation topological specificity factor MinE CPRO_00990 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_01000 PF03775 Septum formation inhibitor MinC, C-terminal domain CPRO_01010 PF00905 Penicillin binding protein transpeptidase domain CPRO_01010 PF03717 Penicillin-binding Protein dimerisation domain CPRO_01020 PF04093 CPRO_01020 CPRO_01030 PF04085 rod shape-determining protein MreC CPRO_01040 PF06723 MreB/Mbl protein CPRO_01050 PF14209 CPRO_01050 CPRO_01060 PF00037 4Fe-4S binding domain CPRO_01060 PF04060 Putative Fe-S cluster CPRO_01070 PF02508 CPRO_01070 CPRO_01080 PF02508 CPRO_01080 CPRO_01090 PF04205 FMN-binding domain CPRO_01100 PF03116 CPRO_01100 CPRO_01110 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CPRO_01110 PF10531 SLBB domain CPRO_01110 PF12838 4Fe-4S dicluster domain CPRO_01110 PF13375 RnfC Barrel sandwich hybrid domain CPRO_01120 PF00309 CPRO_01120 CPRO_01120 PF04552 Sigma-54, DNA binding domain CPRO_01120 PF04963 Sigma-54 factor, core binding domain CPRO_01130 PF00155 Aminotransferase class I and II CPRO_01130 PF00392 Bacterial regulatory proteins, gntR family CPRO_01150 PF01411 tRNA synthetases class II (A) CPRO_01150 PF02272 DHHA1 domain CPRO_01150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_01170 PF05525 CPRO_01170 CPRO_01180 PF01381 Helix-turn-helix CPRO_01200 PF00082 Subtilase family CPRO_01220 PF00239 Resolvase, N terminal domain CPRO_01220 PF07508 Recombinase CPRO_01230 PF02110 Hydroxyethylthiazole kinase family CPRO_01240 PF02581 Thiamine monophosphate synthase/TENI CPRO_01250 PF00392 Bacterial regulatory proteins, gntR family CPRO_01250 PF07729 FCD domain CPRO_01260 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_01270 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_01280 PF04290 CPRO_01280 CPRO_01290 PF06808 CPRO_01290 CPRO_01340 PF00149 Calcineurin-like phosphoesterase CPRO_01350 PF01966 HD domain CPRO_01350 PF13286 Phosphohydrolase-associated domain CPRO_01360 PF01807 CHC2 zinc finger CPRO_01360 PF08275 DNA primase catalytic core, N-terminal domain CPRO_01360 PF10410 DnaB-helicase binding domain of primase CPRO_01360 PF13155 Toprim-like CPRO_01370 PF00140 Sigma-70 factor, region 1 CPRO_01370 PF03979 Sigma-70 factor, region 1 CPRO_01370 PF04539 Sigma-70 region 3 CPRO_01370 PF04542 Sigma-70 region 2 CPRO_01370 PF04545 Sigma-70, region 4 CPRO_01380 PF12847 Methyltransferase domain CPRO_01390 PF01784 NIF3 (NGG1p interacting factor 3) CPRO_01400 PF00485 Phosphoribulokinase / Uridine kinase family CPRO_01430 PF00589 Phage integrase family CPRO_01460 PF01381 Helix-turn-helix CPRO_01480 PF07833 Copper amine oxidase N-terminal domain CPRO_01490 PF07833 Copper amine oxidase N-terminal domain CPRO_01510 PF02156 Glycosyl hydrolase family 26 CPRO_01530 PF13304 AAA domain CPRO_01560 PF00589 Phage integrase family CPRO_01560 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_01570 PF07833 Copper amine oxidase N-terminal domain CPRO_01590 PF00484 Carbonic anhydrase CPRO_01600 PF02586 Uncharacterised ACR, COG2135 CPRO_01610 PF13483 Beta-lactamase superfamily domain CPRO_01620 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_01630 PF01594 CPRO_01630 CPRO_01640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_01640 PF06580 CPRO_01640 CPRO_01640 PF07694 5TMR of 5TMR-LYT CPRO_01650 PF00072 Response regulator receiver domain CPRO_01650 PF04397 LytTr DNA-binding domain CPRO_01660 PF02554 CPRO_01660 CPRO_01660 PF13722 CPRO_01660 CPRO_01670 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPRO_01680 PF10672 S-adenosylmethionine-dependent methyltransferase CPRO_01690 PF01048 Phosphorylase superfamily CPRO_01700 PF03553 CPRO_01700 CPRO_01710 PF01814 Hemerythrin HHE cation binding domain CPRO_01720 PF01261 Xylose isomerase-like TIM barrel CPRO_01730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPRO_01740 PF12822 Protein of unknown function (DUF3816) CPRO_01760 PF00005 ABC transporter CPRO_01770 PF01458 Uncharacterized protein family (UPF0051) CPRO_01780 PF00717 Peptidase S24-like CPRO_01810 PF08984 Domain of unknown function (DUF1858) CPRO_01830 PF00005 ABC transporter CPRO_01830 PF12848 ABC transporter CPRO_01840 PF02629 CoA binding domain CPRO_01840 PF06971 Putative DNA-binding protein N-terminus CPRO_01850 PF01810 CPRO_01850 CPRO_01860 PF01554 MatE CPRO_01870 PF06445 GyrI-like small molecule binding domain CPRO_01870 PF13411 MerR HTH family regulatory protein CPRO_01880 PF00005 ABC transporter CPRO_01890 PF00005 ABC transporter CPRO_01890 PF12399 Branched-chain amino acid ATP-binding cassette transporter CPRO_01900 PF02653 CPRO_01900 CPRO_01910 PF02653 CPRO_01910 CPRO_01920 PF13458 Periplasmic binding protein CPRO_01930 PF00303 Thymidylate synthase CPRO_01940 PF00186 Dihydrofolate reductase CPRO_01950 PF01743 Poly A polymerase head domain CPRO_01950 PF12627 Probable RNA and SrmB- binding site of polymerase A CPRO_01950 PF13735 tRNA nucleotidyltransferase domain 2 putative CPRO_01980 PF08308 CPRO_01980 CPRO_01990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPRO_01990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPRO_01990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPRO_01990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPRO_02000 PF00474 Sodium:solute symporter family CPRO_02010 PF00440 Bacterial regulatory proteins, tetR family CPRO_02010 PF08359 YsiA-like protein, C-terminal region CPRO_02020 PF09002 Domain of unknown function (DUF1887) CPRO_02030 PF09579 CPRO_02030 CPRO_02050 PF07314 CPRO_02050 CPRO_02070 PF01925 CPRO_02070 CPRO_02080 PF01925 CPRO_02080 CPRO_02100 PF02446 4-alpha-glucanotransferase CPRO_02110 PF00733 Asparagine synthase CPRO_02110 PF13537 Glutamine amidotransferase domain CPRO_02120 PF00892 EamA-like transporter family CPRO_02130 PF00892 EamA-like transporter family CPRO_02140 PF00465 Iron-containing alcohol dehydrogenase CPRO_02150 PF01926 50S ribosome-binding GTPase CPRO_02150 PF06071 Protein of unknown function (DUF933) CPRO_02170 PF09580 CPRO_02170 CPRO_02180 PF00395 S-layer homology domain CPRO_02190 PF04055 Radical SAM superfamily CPRO_02210 PF08486 CPRO_02210 CPRO_02220 PF01551 Peptidase family M23 CPRO_02230 PF01661 Macro domain CPRO_02240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CPRO_02240 PF16321 CPRO_02240 CPRO_02250 PF00265 Thymidine kinase CPRO_02260 PF13023 HD domain CPRO_02270 PF02386 Cation transport protein CPRO_02280 PF02080 TrkA-C domain CPRO_02280 PF02254 TrkA-N domain CPRO_02290 PF00271 Helicase conserved C-terminal domain CPRO_02290 PF01043 SecA preprotein cross-linking domain CPRO_02290 PF02810 SEC-C motif CPRO_02290 PF07516 SecA Wing and Scaffold domain CPRO_02290 PF07517 SecA DEAD-like domain CPRO_02300 PF13529 Peptidase_C39 like family CPRO_02310 PF00472 RF-1 domain CPRO_02310 PF03462 PCRF domain CPRO_02320 PF00849 RNA pseudouridylate synthase CPRO_02320 PF01479 S4 domain CPRO_02330 PF00483 Nucleotidyl transferase CPRO_02350 PF06325 Ribosomal protein L11 methyltransferase (PrmA) CPRO_02360 PF04452 RNA methyltransferase CPRO_02370 PF00266 Aminotransferase class-V CPRO_02380 PF02568 Thiamine biosynthesis protein (ThiI) CPRO_02380 PF02926 THUMP domain CPRO_02410 PF06725 3D domain CPRO_02410 PF07501 G5 domain CPRO_02420 PF01026 TatD related DNase CPRO_02430 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_02430 PF01588 Putative tRNA binding domain CPRO_02430 PF08264 Anticodon-binding domain of tRNA CPRO_02430 PF09334 tRNA synthetases class I (M) CPRO_02440 PF02073 Thermophilic metalloprotease (M29) CPRO_02450 PF02579 Dinitrogenase iron-molybdenum cofactor CPRO_02460 PF13419 Haloacid dehalogenase-like hydrolase CPRO_02470 PF01132 Elongation factor P (EF-P) OB domain CPRO_02470 PF08207 Elongation factor P (EF-P) KOW-like domain CPRO_02470 PF09285 Elongation factor P, C-terminal CPRO_02490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_02490 PF00672 HAMP domain CPRO_02490 PF02743 Cache domain CPRO_02500 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_02510 PF01066 CDP-alcohol phosphatidyltransferase CPRO_02520 PF00916 CPRO_02520 CPRO_02520 PF01740 STAS domain CPRO_02530 PF02653 CPRO_02530 CPRO_02540 PF02653 CPRO_02540 CPRO_02550 PF00005 ABC transporter CPRO_02560 PF02608 Basic membrane protein CPRO_02570 PF00156 Phosphoribosyl transferase domain CPRO_02600 PF01554 MatE CPRO_02610 PF04748 Divergent polysaccharide deacetylase CPRO_02620 PF03838 Recombination protein U CPRO_02630 PF01523 Putative modulator of DNA gyrase CPRO_02640 PF01523 Putative modulator of DNA gyrase CPRO_02660 PF07521 RNA-metabolising metallo-beta-lactamase CPRO_02660 PF10996 Beta-Casp domain CPRO_02660 PF16661 CPRO_02660 CPRO_02670 PF00128 Alpha amylase, catalytic domain CPRO_02670 PF02806 Alpha amylase, C-terminal all-beta domain CPRO_02670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CPRO_02680 PF01165 Ribosomal protein S21 CPRO_02690 PF09424 Yqey-like protein CPRO_02700 PF04392 ABC transporter substrate binding protein CPRO_02710 PF02653 CPRO_02710 CPRO_02720 PF00005 ABC transporter CPRO_02730 PF07873 YabP family CPRO_02740 PF06898 CPRO_02740 CPRO_02750 PF02562 PhoH-like protein CPRO_02760 PF01966 HD domain CPRO_02760 PF07697 CPRO_02760 CPRO_02760 PF07698 CPRO_02760 CPRO_02770 PF02130 Uncharacterized protein family UPF0054 CPRO_02780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPRO_02790 PF03167 Uracil DNA glycosylase superfamily CPRO_02810 PF01926 50S ribosome-binding GTPase CPRO_02810 PF07650 KH domain CPRO_02830 PF02565 Recombination protein O C terminal CPRO_02830 PF11967 Recombination protein O N terminal CPRO_02850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_02850 PF03129 Anticodon binding domain CPRO_02860 PF00302 Chloramphenicol acetyltransferase CPRO_02870 PF00391 PEP-utilising enzyme, mobile domain CPRO_02870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CPRO_02870 PF02896 PEP-utilising enzyme, TIM barrel domain CPRO_02880 PF00460 Flagella basal body rod protein CPRO_02890 PF00460 Flagella basal body rod protein CPRO_02890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_02900 PF02049 CPRO_02900 CPRO_02910 PF01514 Secretory protein of YscJ/FliF family CPRO_02910 PF08345 CPRO_02910 CPRO_02920 PF01706 FliG C-terminal domain CPRO_02920 PF14841 FliG middle domain CPRO_02920 PF14842 FliG N-terminal domain CPRO_02930 PF02108 CPRO_02930 CPRO_02940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_02940 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPRO_02950 PF02050 Flagellar FliJ protein CPRO_02970 PF01863 Protein of unknown function DUF45 CPRO_02980 PF16868 CPRO_02980 CPRO_02990 PF08905 CPRO_02990 CPRO_03000 PF06808 CPRO_03000 CPRO_03010 PF07739 TipAS antibiotic-recognition domain CPRO_03010 PF13411 MerR HTH family regulatory protein CPRO_03030 PF01381 Helix-turn-helix CPRO_03050 PF02659 CPRO_03050 CPRO_03060 PF00122 E1-E2 ATPase CPRO_03060 PF00689 Cation transporting ATPase, C-terminus CPRO_03060 PF00690 Cation transporter/ATPase, N-terminus CPRO_03060 PF00702 haloacid dehalogenase-like hydrolase CPRO_03070 PF00155 Aminotransferase class I and II CPRO_03090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_03090 PF10114 CPRO_03090 CPRO_03100 PF00588 SpoU rRNA Methylase family CPRO_03110 PF01475 Ferric uptake regulator family CPRO_03120 PF11193 CPRO_03120 CPRO_03130 PF13641 Glycosyltransferase like family 2 CPRO_03140 PF00072 Response regulator receiver domain CPRO_03140 PF00486 Transcriptional regulatory protein, C terminal CPRO_03150 PF00512 His Kinase A (phospho-acceptor) domain CPRO_03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_03160 PF13353 4Fe-4S single cluster domain CPRO_03170 PF03477 ATP cone domain CPRO_03170 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPRO_03180 PF05239 PRC-barrel domain CPRO_03190 PF03477 ATP cone domain CPRO_03230 PF00580 UvrD/REP helicase N-terminal domain CPRO_03230 PF12705 PD-(D/E)XK nuclease superfamily CPRO_03230 PF13361 UvrD-like helicase C-terminal domain CPRO_03240 PF00892 EamA-like transporter family CPRO_03270 PF00440 Bacterial regulatory proteins, tetR family CPRO_03280 PF01551 Peptidase family M23 CPRO_03310 PF02367 Uncharacterised P-loop hydrolase UPF0079 CPRO_03320 PF00814 Glycoprotease family CPRO_03330 PF00583 Acetyltransferase (GNAT) family CPRO_03340 PF05362 Lon protease (S16) C-terminal proteolytic domain CPRO_03340 PF13654 AAA domain CPRO_03360 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_03360 PF07833 Copper amine oxidase N-terminal domain CPRO_03360 PF11741 AMIN domain CPRO_03370 PF06541 CPRO_03370 CPRO_03380 PF01138 3' exoribonuclease family, domain 1 CPRO_03380 PF03725 3' exoribonuclease family, domain 2 CPRO_03390 PF01725 Ham1 family CPRO_03400 PF12850 Calcineurin-like phosphoesterase superfamily domain CPRO_03470 PF12900 Pyridoxamine 5'-phosphate oxidase CPRO_03490 PF01255 Putative undecaprenyl diphosphate synthase CPRO_03500 PF01432 Peptidase family M3 CPRO_03500 PF08439 Oligopeptidase F CPRO_03510 PF00534 Glycosyl transferases group 1 CPRO_03510 PF08323 Starch synthase catalytic domain CPRO_03530 PF02674 CPRO_03530 CPRO_03600 PF01184 CPRO_03600 CPRO_03620 PF01381 Helix-turn-helix CPRO_03630 PF00302 Chloramphenicol acetyltransferase CPRO_03640 PF01022 Bacterial regulatory protein, arsR family CPRO_03650 PF07853 CPRO_03650 CPRO_03650 PF13630 CPRO_03650 CPRO_03660 PF00571 CBS domain CPRO_03660 PF01368 DHH family CPRO_03660 PF02833 DHHA2 domain CPRO_03660 PF07085 DRTGG domain CPRO_03670 PF01416 tRNA pseudouridine synthase CPRO_03680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_03690 PF00583 Acetyltransferase (GNAT) family CPRO_03710 PF01380 SIS domain CPRO_03710 PF13522 Glutamine amidotransferase domain CPRO_03720 PF00392 Bacterial regulatory proteins, gntR family CPRO_03750 PF00005 ABC transporter CPRO_03760 PF04023 FeoA domain CPRO_03770 PF02421 Ferrous iron transport protein B CPRO_03770 PF07664 CPRO_03770 CPRO_03770 PF07670 Nucleoside recognition CPRO_03790 PF01381 Helix-turn-helix CPRO_03790 PF07883 Cupin domain CPRO_03810 PF00188 Cysteine-rich secretory protein family CPRO_03830 PF01987 Mitochondrial biogenesis AIM24 CPRO_03850 PF04055 Radical SAM superfamily CPRO_03860 PF04456 Protein of unknown function (DUF503) CPRO_03870 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CPRO_03870 PF05697 Bacterial trigger factor protein (TF) CPRO_03870 PF05698 Bacterial trigger factor protein (TF) C-terminus CPRO_03880 PF00574 Clp protease CPRO_03890 PF06689 ClpX C4-type zinc finger CPRO_03890 PF07724 AAA domain (Cdc48 subfamily) CPRO_03890 PF10431 C-terminal, D2-small domain, of ClpB protein CPRO_03900 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_03910 PF00892 EamA-like transporter family CPRO_03920 PF09918 CPRO_03920 CPRO_03930 PF01580 FtsK/SpoIIIE family CPRO_03930 PF09397 Ftsk gamma domain CPRO_03930 PF13491 CPRO_03930 CPRO_03940 PF01268 Formate--tetrahydrofolate ligase CPRO_03950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CPRO_03950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CPRO_03960 PF00919 Uncharacterized protein family UPF0004 CPRO_03960 PF04055 Radical SAM superfamily CPRO_03970 PF01066 CDP-alcohol phosphatidyltransferase CPRO_03980 PF00994 Probable molybdopterin binding domain CPRO_03980 PF02464 Competence-damaged protein CPRO_03990 PF00892 EamA-like transporter family CPRO_04000 PF00154 recA bacterial DNA recombination protein CPRO_04010 PF02631 RecX family CPRO_04020 PF13181 Tetratricopeptide repeat CPRO_04020 PF13424 Tetratricopeptide repeat CPRO_04030 PF00829 Ribosomal prokaryotic L21 protein CPRO_04040 PF04327 Protein of unknown function (DUF464) CPRO_04050 PF01016 Ribosomal L27 protein CPRO_04070 PF01018 GTP1/OBG CPRO_04070 PF01926 50S ribosome-binding GTPase CPRO_04070 PF09269 Domain of unknown function (DUF1967) CPRO_04080 PF00990 GGDEF domain CPRO_04090 PF05193 Peptidase M16 inactive domain CPRO_04100 PF00675 Insulinase (Peptidase family M16) CPRO_04100 PF05193 Peptidase M16 inactive domain CPRO_04110 PF01790 CPRO_04110 CPRO_04120 PF00005 ABC transporter CPRO_04120 PF12848 ABC transporter CPRO_04120 PF16326 CPRO_04120 CPRO_04130 PF00571 CBS domain CPRO_04130 PF01595 CPRO_04130 CPRO_04130 PF03471 Transporter associated domain CPRO_04140 PF00704 Glycosyl hydrolases family 18 CPRO_04140 PF01476 LysM domain CPRO_04160 PF00072 Response regulator receiver domain CPRO_04160 PF00486 Transcriptional regulatory protein, C terminal CPRO_04170 PF00512 His Kinase A (phospho-acceptor) domain CPRO_04170 PF00672 HAMP domain CPRO_04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_04180 PF07833 Copper amine oxidase N-terminal domain CPRO_04190 PF02811 PHP domain CPRO_04200 PF12670 CPRO_04200 CPRO_04210 PF02355 Protein export membrane protein CPRO_04220 PF02355 Protein export membrane protein CPRO_04230 PF01171 PP-loop family CPRO_04240 PF00589 Phage integrase family CPRO_04250 PF00293 NUDIX domain CPRO_04260 PF01926 50S ribosome-binding GTPase CPRO_04270 PF00717 Peptidase S24-like CPRO_04290 PF01245 Ribosomal protein L19 CPRO_04300 PF03547 CPRO_04300 CPRO_04310 PF00440 Bacterial regulatory proteins, tetR family CPRO_04320 PF03729 CPRO_04320 CPRO_04330 PF04055 Radical SAM superfamily CPRO_04330 PF13186 Iron-sulfur cluster-binding domain CPRO_04330 PF13394 4Fe-4S single cluster domain CPRO_04340 PF00156 Phosphoribosyl transferase domain CPRO_04350 PF01368 DHH family CPRO_04350 PF02272 DHHA1 domain CPRO_04360 PF00933 Glycosyl hydrolase family 3 N terminal domain CPRO_04370 PF02824 TGS domain CPRO_04370 PF04607 Region found in RelA / SpoT proteins CPRO_04370 PF13291 ACT domain CPRO_04370 PF13328 HD domain CPRO_04380 PF02580 D-Tyr-tRNA(Tyr) deacylase CPRO_04390 PF04055 Radical SAM superfamily CPRO_04400 PF03129 Anticodon binding domain CPRO_04400 PF13393 Histidyl-tRNA synthetase CPRO_04410 PF02080 TrkA-C domain CPRO_04410 PF02254 TrkA-N domain CPRO_04420 PF02386 Cation transport protein CPRO_04440 PF00009 Elongation factor Tu GTP binding domain CPRO_04440 PF00679 Elongation factor G C-terminus CPRO_04440 PF03144 Elongation factor Tu domain 2 CPRO_04440 PF06421 GTP-binding protein LepA C-terminus CPRO_04450 PF00072 Response regulator receiver domain CPRO_04450 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_04460 PF00398 Ribosomal RNA adenine dimethylase CPRO_04470 PF06695 CPRO_04470 CPRO_04480 PF01380 SIS domain CPRO_04480 PF01418 Helix-turn-helix domain, rpiR family CPRO_04510 PF01965 DJ-1/PfpI family CPRO_04540 PF02390 Putative methyltransferase CPRO_04550 PF14277 Domain of unknown function (DUF4364) CPRO_04560 PF04055 Radical SAM superfamily CPRO_04560 PF16199 CPRO_04560 CPRO_04580 PF00155 Aminotransferase class I and II CPRO_04600 PF13291 ACT domain CPRO_04610 PF00288 GHMP kinases N terminal domain CPRO_04610 PF08544 GHMP kinases C terminal CPRO_04620 PF00696 Amino acid kinase family CPRO_04620 PF01842 ACT domain CPRO_04620 PF13840 ACT domain CPRO_04630 PF05067 Manganese containing catalase CPRO_04640 PF00239 Resolvase, N terminal domain CPRO_04640 PF07508 Recombinase CPRO_04650 PF12870 Lumazine-binding domain CPRO_04700 PF00857 Isochorismatase family CPRO_04710 PF05067 Manganese containing catalase CPRO_04720 PF12652 CPRO_04720 CPRO_04730 PF11007 CPRO_04730 CPRO_04740 PF02632 BioY family CPRO_04760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPRO_04760 PF02770 Acyl-CoA dehydrogenase, middle domain CPRO_04760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPRO_04770 PF01012 Electron transfer flavoprotein domain CPRO_04780 PF00766 Electron transfer flavoprotein FAD-binding domain CPRO_04780 PF01012 Electron transfer flavoprotein domain CPRO_04790 PF04607 Region found in RelA / SpoT proteins CPRO_04800 PF01476 LysM domain CPRO_04810 PF03840 Preprotein translocase SecG subunit CPRO_04820 PF00575 S1 RNA binding domain CPRO_04820 PF00773 RNB domain CPRO_04820 PF08206 Ribonuclease B OB domain CPRO_04840 PF13520 Amino acid permease CPRO_04850 PF02001 CPRO_04850 CPRO_04860 PF10609 ParA/MinD ATPase like CPRO_04870 PF01235 CPRO_04870 CPRO_04880 PF01235 CPRO_04880 CPRO_04890 PF01235 CPRO_04890 CPRO_04910 PF00534 Glycosyl transferases group 1 CPRO_04910 PF13439 Glycosyltransferase Family 4 CPRO_04920 PF00580 UvrD/REP helicase N-terminal domain CPRO_04920 PF13361 UvrD-like helicase C-terminal domain CPRO_04940 PF00005 ABC transporter CPRO_04940 PF13732 CPRO_04940 CPRO_04950 PF01061 CPRO_04950 CPRO_04970 PF07584 CPRO_04970 CPRO_04970 PF13519 von Willebrand factor type A domain CPRO_04980 PF00092 von Willebrand factor type A domain CPRO_04980 PF13768 von Willebrand factor type A domain CPRO_04990 PF04294 CPRO_04990 CPRO_04990 PF07501 G5 domain CPRO_04990 PF12229 Putative peptidoglycan binding domain CPRO_05000 PF00586 AIR synthase related protein, N-terminal domain CPRO_05000 PF02769 AIR synthase related protein, C-terminal domain CPRO_05010 PF00155 Aminotransferase class I and II CPRO_05030 PF00571 CBS domain CPRO_05030 PF01595 CPRO_05030 CPRO_05030 PF03471 Transporter associated domain CPRO_05050 PF02146 Sir2 family CPRO_05080 PF03551 Transcriptional regulator PadR-like family CPRO_05140 PF04023 FeoA domain CPRO_05150 PF04023 FeoA domain CPRO_05160 PF02421 Ferrous iron transport protein B CPRO_05160 PF07664 CPRO_05160 CPRO_05160 PF07670 Nucleoside recognition CPRO_05170 PF12669 CPRO_05170 CPRO_05180 PF01548 CPRO_05180 CPRO_05180 PF02371 CPRO_05180 CPRO_05190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_05190 PF02743 Cache domain CPRO_05210 PF00258 Flavodoxin CPRO_05220 PF12672 CPRO_05220 CPRO_05230 PF10087 CPRO_05230 CPRO_05240 PF13302 Acetyltransferase (GNAT) domain CPRO_05250 PF04607 Region found in RelA / SpoT proteins CPRO_05260 PF00149 Calcineurin-like phosphoesterase CPRO_05280 PF01613 Flavin reductase like domain CPRO_05290 PF01189 NOL1/NOP2/sun family CPRO_05290 PF13636 pre-rRNA processing and ribosome biogenesis CPRO_05290 PF17125 CPRO_05290 CPRO_05290 PF17126 CPRO_05290 CPRO_05300 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_05300 PF14821 Threonine synthase N terminus CPRO_05310 PF00923 Transaldolase CPRO_05320 PF00456 Transketolase, thiamine diphosphate binding domain CPRO_05320 PF02779 Transketolase, pyrimidine binding domain CPRO_05320 PF02780 Transketolase, C-terminal domain CPRO_05330 PF13563 2'-5' RNA ligase superfamily CPRO_05340 PF13740 ACT domain CPRO_05350 PF05167 Uncharacterised ACR (DUF711) CPRO_05370 PF00338 Ribosomal protein S10p/S20e CPRO_05380 PF00297 Ribosomal protein L3 CPRO_05390 PF00573 Ribosomal protein L4/L1 family CPRO_05400 PF00276 Ribosomal protein L23 CPRO_05410 PF00181 Ribosomal Proteins L2, RNA binding domain CPRO_05410 PF03947 Ribosomal Proteins L2, C-terminal domain CPRO_05420 PF00203 Ribosomal protein S19 CPRO_05430 PF00237 Ribosomal protein L22p/L17e CPRO_05440 PF00189 Ribosomal protein S3, C-terminal domain CPRO_05440 PF07650 KH domain CPRO_05450 PF00252 Ribosomal protein L16p/L10e CPRO_05460 PF00831 Ribosomal L29 protein CPRO_05470 PF00366 Ribosomal protein S17 CPRO_05480 PF00238 Ribosomal protein L14p/L23e CPRO_05490 PF00467 KOW motif CPRO_05490 PF17136 CPRO_05490 CPRO_05500 PF00281 Ribosomal protein L5 CPRO_05500 PF00673 ribosomal L5P family C-terminus CPRO_05510 PF00253 Ribosomal protein S14p/S29e CPRO_05520 PF00410 Ribosomal protein S8 CPRO_05530 PF00347 Ribosomal protein L6 CPRO_05540 PF00861 Ribosomal L18p/L5e family CPRO_05550 PF00333 Ribosomal protein S5, N-terminal domain CPRO_05550 PF03719 Ribosomal protein S5, C-terminal domain CPRO_05560 PF00327 Ribosomal protein L30p/L7e CPRO_05570 PF00828 Ribosomal protein L18e/L15 CPRO_05580 PF00344 SecY translocase CPRO_05590 PF00406 Adenylate kinase CPRO_05590 PF05191 Adenylate kinase, active site lid CPRO_05600 PF00557 Metallopeptidase family M24 CPRO_05620 PF01176 Translation initiation factor 1A / IF-1 CPRO_05630 PF00444 Ribosomal protein L36 CPRO_05640 PF00416 Ribosomal protein S13/S18 CPRO_05650 PF00411 Ribosomal protein S11 CPRO_05660 PF00163 Ribosomal protein S4/S9 N-terminal domain CPRO_05670 PF01479 S4 domain CPRO_05680 PF01000 RNA polymerase Rpb3/RpoA insert domain CPRO_05680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CPRO_05680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CPRO_05690 PF01196 Ribosomal protein L17 CPRO_05720 PF00005 ABC transporter CPRO_05730 PF00005 ABC transporter CPRO_05740 PF02361 Cobalt transport protein CPRO_05750 PF01416 tRNA pseudouridine synthase CPRO_05760 PF00572 Ribosomal protein L13 CPRO_05770 PF00380 Ribosomal protein S9/S16 CPRO_05780 PF05684 CPRO_05780 CPRO_05790 PF01244 Membrane dipeptidase (Peptidase family M19) CPRO_05800 PF01381 Helix-turn-helix CPRO_05800 PF07883 Cupin domain CPRO_05810 PF01985 CRS1 / YhbY (CRM) domain CPRO_05820 PF11187 Protein of unknown function (DUF2974) CPRO_05830 PF01467 Cytidylyltransferase CPRO_05830 PF01966 HD domain CPRO_05840 PF02410 Oligomerisation domain CPRO_05850 PF00310 Glutamine amidotransferases class-II CPRO_05850 PF01493 GXGXG motif CPRO_05850 PF01645 Conserved region in glutamate synthase CPRO_05850 PF04898 Glutamate synthase central domain CPRO_05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_05860 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPRO_05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_05870 PF17200 CPRO_05870 CPRO_05900 PF00753 Metallo-beta-lactamase superfamily CPRO_05930 PF05958 tRNA (Uracil-5-)-methyltransferase CPRO_05940 PF00575 S1 RNA binding domain CPRO_05960 PF00005 ABC transporter CPRO_05960 PF09383 NIL domain CPRO_05970 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_05980 PF03180 NLPA lipoprotein CPRO_05990 PF01546 Peptidase family M20/M25/M40 CPRO_05990 PF07687 Peptidase dimerisation domain CPRO_06000 PF01554 MatE CPRO_06010 PF00753 Metallo-beta-lactamase superfamily CPRO_06020 PF01116 Fructose-bisphosphate aldolase class-II CPRO_06030 PF01252 CPRO_06030 CPRO_06040 PF01042 Endoribonuclease L-PSP CPRO_06050 PF00009 Elongation factor Tu GTP binding domain CPRO_06050 PF03144 Elongation factor Tu domain 2 CPRO_06050 PF16658 CPRO_06050 CPRO_06070 PF04542 Sigma-70 region 2 CPRO_06070 PF08281 Sigma-70, region 4 CPRO_06080 PF13490 Putative zinc-finger CPRO_06090 PF13393 Histidyl-tRNA synthetase CPRO_06100 PF01634 ATP phosphoribosyltransferase CPRO_06110 PF00815 Histidinol dehydrogenase CPRO_06120 PF00155 Aminotransferase class I and II CPRO_06130 PF00475 Imidazoleglycerol-phosphate dehydratase CPRO_06140 PF00117 Glutamine amidotransferase class-I CPRO_06150 PF00977 Histidine biosynthesis protein CPRO_06160 PF00977 Histidine biosynthesis protein CPRO_06170 PF01502 Phosphoribosyl-AMP cyclohydrolase CPRO_06170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CPRO_06180 PF02811 PHP domain CPRO_06190 PF00255 Glutathione peroxidase CPRO_06200 PF01047 MarR family CPRO_06210 PF00520 Ion transport protein CPRO_06240 PF05709 Phage tail protein CPRO_06250 PF10651 Domain of unknown function (DUF2479) CPRO_06270 PF08378 CPRO_06270 CPRO_06280 PF01396 CPRO_06280 CPRO_06290 PF14267 CPRO_06290 CPRO_06350 PF02386 Cation transport protein CPRO_06360 PF02254 TrkA-N domain CPRO_06370 PF00512 His Kinase A (phospho-acceptor) domain CPRO_06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_06370 PF13493 Domain of unknown function (DUF4118) CPRO_06380 PF00072 Response regulator receiver domain CPRO_06380 PF00486 Transcriptional regulatory protein, C terminal CPRO_06390 PF07833 Copper amine oxidase N-terminal domain CPRO_06390 PF13739 Domain of unknown function (DUF4163) CPRO_06400 PF12663 CPRO_06400 CPRO_06410 PF13304 AAA domain CPRO_06410 PF13476 AAA domain CPRO_06420 PF04199 Putative cyclase CPRO_06430 PF07833 Copper amine oxidase N-terminal domain CPRO_06450 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_06460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_06460 PF03466 LysR substrate binding domain CPRO_06470 PF03483 B3/4 domain CPRO_06480 PF04542 Sigma-70 region 2 CPRO_06480 PF08281 Sigma-70, region 4 CPRO_06490 PF13490 Putative zinc-finger CPRO_06500 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CPRO_06500 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CPRO_06510 PF00550 Phosphopantetheine attachment site CPRO_06520 PF03060 Nitronate monooxygenase CPRO_06530 PF00698 Acyl transferase domain CPRO_06540 PF13561 Enoyl-(Acyl carrier protein) reductase CPRO_06550 PF00109 Beta-ketoacyl synthase, N-terminal domain CPRO_06550 PF02801 Beta-ketoacyl synthase, C-terminal domain CPRO_06560 PF00364 Biotin-requiring enzyme CPRO_06570 PF07977 FabA-like domain CPRO_06580 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CPRO_06580 PF02785 Biotin carboxylase C-terminal domain CPRO_06580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_06590 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CPRO_06600 PF04531 CPRO_06600 CPRO_06610 PF03358 NADPH-dependent FMN reductase CPRO_06620 PF03551 Transcriptional regulator PadR-like family CPRO_06620 PF10400 Virulence activator alpha C-term CPRO_06630 PF03418 Germination protease CPRO_06640 PF01649 Ribosomal protein S20 CPRO_06650 PF09719 Putative redox-active protein (C_GCAxxG_C_C) CPRO_06660 PF00591 Glycosyl transferase family, a/b domain CPRO_06660 PF02885 Glycosyl transferase family, helical bundle domain CPRO_06660 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CPRO_06670 PF01676 Metalloenzyme superfamily CPRO_06680 PF13420 Acetyltransferase (GNAT) domain CPRO_06690 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CPRO_06700 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_06700 PF08264 Anticodon-binding domain of tRNA CPRO_06710 PF00578 AhpC/TSA family CPRO_06710 PF02683 CPRO_06710 CPRO_06720 PF13520 Amino acid permease CPRO_06730 PF06445 GyrI-like small molecule binding domain CPRO_06730 PF13411 MerR HTH family regulatory protein CPRO_06740 PF02515 CoA-transferase family III CPRO_06770 PF00633 Helix-hairpin-helix motif CPRO_06770 PF00730 HhH-GPD superfamily base excision DNA repair protein CPRO_06800 PF00730 HhH-GPD superfamily base excision DNA repair protein CPRO_06800 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CPRO_06810 PF04073 Aminoacyl-tRNA editing domain CPRO_06820 PF07833 Copper amine oxidase N-terminal domain CPRO_06820 PF13365 Trypsin-like peptidase domain CPRO_06830 PF04023 FeoA domain CPRO_06840 PF02421 Ferrous iron transport protein B CPRO_06840 PF07664 CPRO_06840 CPRO_06840 PF07670 Nucleoside recognition CPRO_06850 PF00583 Acetyltransferase (GNAT) family CPRO_06860 PF00480 ROK family CPRO_06880 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CPRO_06880 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CPRO_06890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPRO_06900 PF01327 Polypeptide deformylase CPRO_06910 PF01330 RuvA N terminal domain CPRO_06910 PF07499 RuvA, C-terminal domain CPRO_06910 PF14520 Helix-hairpin-helix domain CPRO_06920 PF05491 Holliday junction DNA helicase ruvB C-terminus CPRO_06920 PF05496 Holliday junction DNA helicase ruvB N-terminus CPRO_06950 PF02915 Rubrerythrin CPRO_06960 PF03749 Sugar fermentation stimulation protein CPRO_06970 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_06970 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_06980 PF00990 GGDEF domain CPRO_06990 PF01810 CPRO_06990 CPRO_07000 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPRO_07010 PF00027 Cyclic nucleotide-binding domain CPRO_07010 PF13545 Crp-like helix-turn-helix domain CPRO_07020 PF12837 4Fe-4S binding domain CPRO_07040 PF00999 Sodium/hydrogen exchanger family CPRO_07050 PF00271 Helicase conserved C-terminal domain CPRO_07050 PF02151 UvrB/uvrC motif CPRO_07050 PF04851 Type III restriction enzyme, res subunit CPRO_07050 PF12344 Ultra-violet resistance protein B CPRO_07070 PF00005 ABC transporter CPRO_07090 PF00436 Single-strand binding protein family CPRO_07100 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CPRO_07110 PF01113 Dihydrodipicolinate reductase, N-terminus CPRO_07110 PF05173 Dihydrodipicolinate reductase, C-terminus CPRO_07130 PF00701 Dihydrodipicolinate synthetase family CPRO_07140 PF01118 Semialdehyde dehydrogenase, NAD binding domain CPRO_07140 PF02774 Semialdehyde dehydrogenase, dimerisation domain CPRO_07150 PF00269 Small, acid-soluble spore proteins, alpha/beta type CPRO_07160 PF13649 Methyltransferase domain CPRO_07170 PF01430 Hsp33 protein CPRO_07180 PF00293 NUDIX domain CPRO_07200 PF01496 V-type ATPase 116kDa subunit family CPRO_07210 PF00137 ATP synthase subunit C CPRO_07220 PF01991 ATP synthase (E/31 kDa) subunit CPRO_07230 PF01992 ATP synthase (C/AC39) subunit CPRO_07240 PF01990 ATP synthase (F/14-kDa) subunit CPRO_07250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_07250 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPRO_07250 PF16886 CPRO_07250 CPRO_07260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_07260 PF02874 ATP synthase alpha/beta family, beta-barrel domain CPRO_07270 PF01813 ATP synthase subunit D CPRO_07280 PF00155 Aminotransferase class I and II CPRO_07300 PF00561 alpha/beta hydrolase fold CPRO_07310 PF03590 Aspartate-ammonia ligase CPRO_07320 PF03965 Penicillinase repressor CPRO_07330 PF05569 BlaR1 peptidase M56 CPRO_07330 PF16107 CPRO_07330 CPRO_07340 PF00395 S-layer homology domain CPRO_07340 PF08486 CPRO_07340 CPRO_07360 PF00205 Thiamine pyrophosphate enzyme, central domain CPRO_07360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_07360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CPRO_07370 PF10369 Small subunit of acetolactate synthase CPRO_07370 PF13710 ACT domain CPRO_07380 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CPRO_07380 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CPRO_07390 PF13189 Cytidylate kinase-like family CPRO_07400 PF00152 tRNA synthetases class II (D, K and N) CPRO_07400 PF01336 OB-fold nucleic acid binding domain CPRO_07400 PF02938 GAD domain CPRO_07420 PF00589 Phage integrase family CPRO_07440 PF01381 Helix-turn-helix CPRO_07490 PF08346 CPRO_07490 CPRO_07500 PF12728 Helix-turn-helix domain CPRO_07520 PF02229 Transcriptional Coactivator p15 (PC4) CPRO_07540 PF10926 CPRO_07540 CPRO_07550 PF10991 Protein of unknown function (DUF2815) CPRO_07560 PF00476 DNA polymerase family A CPRO_07570 PF05272 CPRO_07570 CPRO_07590 PF00176 SNF2 family N-terminal domain CPRO_07620 PF04542 Sigma-70 region 2 CPRO_07620 PF04545 Sigma-70, region 4 CPRO_07630 PF00313 'Cold-shock' DNA-binding domain CPRO_07670 PF07833 Copper amine oxidase N-terminal domain CPRO_07680 PF03592 Terminase small subunit CPRO_07690 PF03237 Terminase-like family CPRO_07700 PF05133 Phage portal protein, SPP1 Gp6-like CPRO_07710 PF06152 CPRO_07710 CPRO_07730 PF06810 CPRO_07730 CPRO_07740 PF05065 Phage capsid family CPRO_07770 PF11114 CPRO_07770 CPRO_07780 PF12691 CPRO_07780 CPRO_07810 PF06854 CPRO_07810 CPRO_07960 PF00877 NlpC/P60 family CPRO_07990 PF09587 Bacterial capsule synthesis protein PGA_cap CPRO_08000 PF01476 LysM domain CPRO_08000 PF02872 5'-nucleotidase, C-terminal domain CPRO_08010 PF00892 EamA-like transporter family CPRO_08030 PF02579 Dinitrogenase iron-molybdenum cofactor CPRO_08040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_08040 PF13187 4Fe-4S dicluster domain CPRO_08050 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_08050 PF13237 4Fe-4S dicluster domain CPRO_08060 PF02579 Dinitrogenase iron-molybdenum cofactor CPRO_08070 PF03576 Peptidase family S58 CPRO_08080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_08090 PF03799 Cell division protein FtsQ CPRO_08090 PF08478 POTRA domain, FtsQ-type CPRO_08100 PF05949 Bacterial protein of unknown function (DUF881) CPRO_08110 PF06947 CPRO_08110 CPRO_08120 PF00091 Tubulin/FtsZ family, GTPase domain CPRO_08120 PF12327 FtsZ family, C-terminal domain CPRO_08130 PF12849 PBP superfamily domain CPRO_08140 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_08150 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_08160 PF00005 ABC transporter CPRO_08170 PF01895 PhoU domain CPRO_08180 PF01966 HD domain CPRO_08190 PF00072 Response regulator receiver domain CPRO_08190 PF00486 Transcriptional regulatory protein, C terminal CPRO_08200 PF00512 His Kinase A (phospho-acceptor) domain CPRO_08200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_08210 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPRO_08210 PF12838 4Fe-4S dicluster domain CPRO_08220 PF12822 Protein of unknown function (DUF3816) CPRO_08230 PF02445 Quinolinate synthetase A protein CPRO_08240 PF00890 FAD binding domain CPRO_08250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CPRO_08250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CPRO_08270 PF00120 Glutamine synthetase, catalytic domain CPRO_08270 PF12437 Glutamine synthetase type III N terminal CPRO_08280 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_08290 PF12838 4Fe-4S dicluster domain CPRO_08300 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_08300 PF17147 CPRO_08300 CPRO_08310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_08320 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_08330 PF05164 Cell division protein ZapA CPRO_08340 PF01136 CPRO_08340 CPRO_08340 PF12392 CPRO_08340 CPRO_08350 PF01098 CPRO_08350 CPRO_08360 PF00905 Penicillin binding protein transpeptidase domain CPRO_08370 PF01869 BadF/BadG/BcrA/BcrD ATPase family CPRO_08380 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CPRO_08390 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CPRO_08400 PF01144 Coenzyme A transferase CPRO_08410 PF00072 Response regulator receiver domain CPRO_08410 PF13487 HD domain CPRO_08420 PF00072 Response regulator receiver domain CPRO_08420 PF00512 His Kinase A (phospho-acceptor) domain CPRO_08420 PF01627 Hpt domain CPRO_08420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_08420 PF08448 PAS fold CPRO_08420 PF13426 PAS domain CPRO_08430 PF00188 Cysteine-rich secretory protein family CPRO_08430 PF00395 S-layer homology domain CPRO_08430 PF14504 CAP-associated N-terminal CPRO_08440 PF04304 CPRO_08440 CPRO_08450 PF11756 CPRO_08450 CPRO_08470 PF12773 CPRO_08470 CPRO_08470 PF13421 CPRO_08470 CPRO_08510 PF04883 CPRO_08510 CPRO_08540 PF04984 Phage tail sheath protein CPRO_08540 PF17481 CPRO_08540 CPRO_08540 PF17482 CPRO_08540 CPRO_08550 PF09393 Protein of unknown function (DUF2001) CPRO_08560 PF08890 Phage XkdN-like protein CPRO_08580 PF01476 LysM domain CPRO_08600 PF10844 CPRO_08600 CPRO_08610 PF10934 CPRO_08610 CPRO_08620 PF04865 CPRO_08620 CPRO_08630 PF10076 CPRO_08630 CPRO_08670 PF09693 CPRO_08670 CPRO_08700 PF03965 Penicillinase repressor CPRO_08710 PF02574 Homocysteine S-methyltransferase CPRO_08730 PF05569 BlaR1 peptidase M56 CPRO_08740 PF03965 Penicillinase repressor CPRO_08770 PF01750 Hydrogenase maturation protease CPRO_08790 PF00708 Acylphosphatase CPRO_08790 PF01300 Telomere recombination CPRO_08790 PF07503 HypF finger CPRO_08800 PF01455 HupF/HypC family CPRO_08810 PF01924 Hydrogenase formation hypA family CPRO_08820 PF00586 AIR synthase related protein, N-terminal domain CPRO_08820 PF02769 AIR synthase related protein, C-terminal domain CPRO_08830 PF00173 Cytochrome b5-like Heme/Steroid binding domain CPRO_08840 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CPRO_08840 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal CPRO_08850 PF00374 Nickel-dependent hydrogenase CPRO_08860 PF00180 Isocitrate/isopropylmalate dehydrogenase CPRO_08870 PF00330 Aconitase family (aconitate hydratase) CPRO_08870 PF00694 Aconitase C-terminal domain CPRO_08880 PF00682 HMGL-like CPRO_08900 PF09084 NMT1/THI5 like CPRO_08910 PF00476 DNA polymerase family A CPRO_08910 PF01367 5'-3' exonuclease, C-terminal SAM fold CPRO_08910 PF01612 3'-5' exonuclease CPRO_08910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CPRO_08920 PF01121 Dephospho-CoA kinase CPRO_08930 PF01464 Transglycosylase SLT domain CPRO_08940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CPRO_08950 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CPRO_08950 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CPRO_08960 PF00239 Resolvase, N terminal domain CPRO_08960 PF07508 Recombinase CPRO_08960 PF13408 Recombinase zinc beta ribbon domain CPRO_08970 PF01381 Helix-turn-helix CPRO_09010 PF00910 RNA helicase CPRO_09050 PF01381 Helix-turn-helix CPRO_09060 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_09090 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPRO_09100 PF00149 Calcineurin-like phosphoesterase CPRO_09110 PF00817 impB/mucB/samB family CPRO_09110 PF11798 IMS family HHH motif CPRO_09110 PF11799 impB/mucB/samB family C-terminal domain CPRO_09130 PF00293 NUDIX domain CPRO_09140 PF03992 Antibiotic biosynthesis monooxygenase CPRO_09150 PF04167 Protein of unknown function (DUF402) CPRO_09160 PF04002 RadC-like JAB domain CPRO_09170 PF04024 CPRO_09170 CPRO_09180 PF00579 tRNA synthetases class I (W and Y) CPRO_09190 PF13180 PDZ domain CPRO_09190 PF13365 Trypsin-like peptidase domain CPRO_09200 PF01467 Cytidylyltransferase CPRO_09210 PF00056 lactate/malate dehydrogenase, NAD binding domain CPRO_09220 PF03358 NADPH-dependent FMN reductase CPRO_09230 PF00733 Asparagine synthase CPRO_09230 PF13537 Glutamine amidotransferase domain CPRO_09240 PF00120 Glutamine synthetase, catalytic domain CPRO_09240 PF12437 Glutamine synthetase type III N terminal CPRO_09260 PF00990 GGDEF domain CPRO_09270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPRO_09270 PF10728 Domain of unknown function (DUF2520) CPRO_09280 PF02548 Ketopantoate hydroxymethyltransferase CPRO_09290 PF02569 Pantoate-beta-alanine ligase CPRO_09320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_09320 PF00672 HAMP domain CPRO_09320 PF17200 CPRO_09320 CPRO_09330 PF01381 Helix-turn-helix CPRO_09370 PF00999 Sodium/hydrogen exchanger family CPRO_09370 PF02080 TrkA-C domain CPRO_09380 PF00180 Isocitrate/isopropylmalate dehydrogenase CPRO_09390 PF00694 Aconitase C-terminal domain CPRO_09400 PF00330 Aconitase family (aconitate hydratase) CPRO_09410 PF00682 HMGL-like CPRO_09410 PF08502 LeuA allosteric (dimerisation) domain CPRO_09420 PF00392 Bacterial regulatory proteins, gntR family CPRO_09420 PF07729 FCD domain CPRO_09430 PF00920 Dehydratase family CPRO_09440 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_09450 PF04290 CPRO_09450 CPRO_09460 PF06808 CPRO_09460 CPRO_09480 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_09490 PF00072 Response regulator receiver domain CPRO_09490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_09490 PF00512 His Kinase A (phospho-acceptor) domain CPRO_09490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_09500 PF14278 CPRO_09500 CPRO_09510 PF16576 CPRO_09510 CPRO_09520 PF12698 ABC-2 family transporter protein CPRO_09530 PF12698 ABC-2 family transporter protein CPRO_09540 PF02321 Outer membrane efflux protein CPRO_09550 PF04055 Radical SAM superfamily CPRO_09560 PF03099 Biotin/lipoate A/B protein ligase family CPRO_09560 PF10437 Bacterial lipoate protein ligase C-terminus CPRO_09570 PF00158 Sigma-54 interaction domain CPRO_09580 PF03313 CPRO_09580 CPRO_09590 PF06271 CPRO_09590 CPRO_09600 PF00521 DNA gyrase/topoisomerase IV, subunit A CPRO_09610 PF00204 DNA gyrase B CPRO_09610 PF00986 DNA gyrase B subunit, carboxyl terminus CPRO_09610 PF01751 Toprim domain CPRO_09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_09640 PF03352 Methyladenine glycosylase CPRO_09650 PF01614 Bacterial transcriptional regulator CPRO_09650 PF09339 IclR helix-turn-helix domain CPRO_09660 PF01081 KDPG and KHG aldolase CPRO_09670 PF00294 pfkB family carbohydrate kinase CPRO_09680 PF03786 D-mannonate dehydratase (UxuA) CPRO_09690 PF01232 Mannitol dehydrogenase Rossmann domain CPRO_09690 PF08125 Mannitol dehydrogenase C-terminal domain CPRO_09700 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_09710 PF04290 CPRO_09710 CPRO_09720 PF06808 CPRO_09720 CPRO_09730 PF00107 Zinc-binding dehydrogenase CPRO_09730 PF08240 Alcohol dehydrogenase GroES-like domain CPRO_09740 PF00392 Bacterial regulatory proteins, gntR family CPRO_09740 PF07729 FCD domain CPRO_09750 PF01381 Helix-turn-helix CPRO_09760 PF01565 FAD binding domain CPRO_09760 PF08031 Berberine and berberine like CPRO_09770 PF00072 Response regulator receiver domain CPRO_09770 PF01627 Hpt domain CPRO_09780 PF00072 Response regulator receiver domain CPRO_09780 PF00196 Bacterial regulatory proteins, luxR family CPRO_09840 PF01380 SIS domain CPRO_09840 PF01418 Helix-turn-helix domain, rpiR family CPRO_09850 PF00294 pfkB family carbohydrate kinase CPRO_09860 PF13407 Periplasmic binding protein domain CPRO_09870 PF00005 ABC transporter CPRO_09880 PF02653 CPRO_09880 CPRO_09890 PF00480 ROK family CPRO_09900 PF01116 Fructose-bisphosphate aldolase class-II CPRO_09910 PF00365 Phosphofructokinase CPRO_09920 PF08013 Tagatose 6 phosphate kinase CPRO_09930 PF00440 Bacterial regulatory proteins, tetR family CPRO_09940 PF00005 ABC transporter CPRO_09950 PF12730 CPRO_09950 CPRO_09970 PF05977 Transmembrane secretion effector CPRO_10010 PF00440 Bacterial regulatory proteins, tetR family CPRO_10020 PF13302 Acetyltransferase (GNAT) domain CPRO_10040 PF12675 CPRO_10040 CPRO_10050 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family CPRO_10060 PF00557 Metallopeptidase family M24 CPRO_10060 PF02810 SEC-C motif CPRO_10080 PF02517 CAAX protease self-immunity CPRO_10090 PF10604 Polyketide cyclase / dehydrase and lipid transport CPRO_10100 PF00072 Response regulator receiver domain CPRO_10100 PF00989 PAS fold CPRO_10100 PF00990 GGDEF domain CPRO_10100 PF08448 PAS fold CPRO_10100 PF13426 PAS domain CPRO_10110 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_10120 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_10130 PF00005 ABC transporter CPRO_10140 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_10150 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_10170 PF04072 Leucine carboxyl methyltransferase CPRO_10180 PF02664 S-Ribosylhomocysteinase (LuxS) CPRO_10190 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_10200 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_10210 PF03466 LysR substrate binding domain CPRO_10220 PF03180 NLPA lipoprotein CPRO_10230 PF00005 ABC transporter CPRO_10230 PF09383 NIL domain CPRO_10240 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_10250 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_10260 PF00037 4Fe-4S binding domain CPRO_10270 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_10270 PF17147 CPRO_10270 CPRO_10280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_10290 PF00501 AMP-binding enzyme CPRO_10290 PF14535 AMP-binding enzyme C-terminal domain CPRO_10300 PF00155 Aminotransferase class I and II CPRO_10310 PF02082 Transcriptional regulator CPRO_10320 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_10330 PF00561 alpha/beta hydrolase fold CPRO_10340 PF03054 tRNA methyl transferase CPRO_10350 PF00899 ThiF family CPRO_10360 PF00266 Aminotransferase class-V CPRO_10370 PF01171 PP-loop family CPRO_10380 PF00742 Homoserine dehydrogenase CPRO_10380 PF01842 ACT domain CPRO_10380 PF03447 Homoserine dehydrogenase, NAD binding domain CPRO_10390 PF03419 CPRO_10390 CPRO_10400 PF04542 Sigma-70 region 2 CPRO_10400 PF04545 Sigma-70, region 4 CPRO_10410 PF01391 Collagen triple helix repeat (20 copies) CPRO_10420 PF01391 Collagen triple helix repeat (20 copies) CPRO_10440 PF00158 Sigma-54 interaction domain CPRO_10440 PF02954 Bacterial regulatory protein, Fis family CPRO_10450 PF00676 Dehydrogenase E1 component CPRO_10460 PF02779 Transketolase, pyrimidine binding domain CPRO_10460 PF02780 Transketolase, C-terminal domain CPRO_10470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPRO_10470 PF00364 Biotin-requiring enzyme CPRO_10470 PF02817 e3 binding domain CPRO_10480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_10480 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_10490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_10490 PF00672 HAMP domain CPRO_10490 PF02743 Cache domain CPRO_10500 PF04392 ABC transporter substrate binding protein CPRO_10510 PF02653 CPRO_10510 CPRO_10520 PF00005 ABC transporter CPRO_10540 PF02082 Transcriptional regulator CPRO_10550 PF04073 Aminoacyl-tRNA editing domain CPRO_10560 PF00501 AMP-binding enzyme CPRO_10570 PF00583 Acetyltransferase (GNAT) family CPRO_10580 PF00550 Phosphopantetheine attachment site CPRO_10590 PF03062 CPRO_10590 CPRO_10610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CPRO_10610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CPRO_10620 PF00733 Asparagine synthase CPRO_10620 PF13537 Glutamine amidotransferase domain CPRO_10640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_10650 PF00171 Aldehyde dehydrogenase family CPRO_10650 PF00465 Iron-containing alcohol dehydrogenase CPRO_10660 PF00270 DEAD/DEAH box helicase CPRO_10660 PF00271 Helicase conserved C-terminal domain CPRO_10660 PF03880 DbpA RNA binding domain CPRO_10670 PF02673 CPRO_10670 CPRO_10680 PF02308 CPRO_10680 CPRO_10690 PF12164 Stage V sporulation protein AA CPRO_10700 PF13782 CPRO_10700 CPRO_10710 PF03862 CPRO_10710 CPRO_10720 PF07451 Stage V sporulation protein AD (SpoVAD) CPRO_10730 PF03862 CPRO_10730 CPRO_10740 PF01709 Transcriptional regulator CPRO_10750 PF00589 Phage integrase family CPRO_10750 PF14657 CPRO_10750 CPRO_10750 PF14659 Phage integrase, N-terminal SAM-like domain CPRO_10760 PF11611 Domain of unknown function (DUF4352) CPRO_10770 PF06114 Domain of unknown function (DUF955) CPRO_10780 PF13443 Cro/C1-type HTH DNA-binding domain CPRO_10790 PF01381 Helix-turn-helix CPRO_10860 PF07261 Replication initiation and membrane attachment CPRO_10860 PF14297 CPRO_10860 CPRO_10920 PF00589 Phage integrase family CPRO_10930 PF03592 Terminase small subunit CPRO_10940 PF04466 Phage terminase large subunit CPRO_10940 PF17288 CPRO_10940 CPRO_10950 PF05133 Phage portal protein, SPP1 Gp6-like CPRO_10960 PF04233 CPRO_10960 CPRO_10970 PF14265 CPRO_10970 CPRO_11010 PF04883 CPRO_11010 CPRO_11060 PF10145 CPRO_11060 CPRO_11070 PF05709 Phage tail protein CPRO_11080 PF10651 Domain of unknown function (DUF2479) CPRO_11100 PF09693 CPRO_11100 CPRO_11110 PF06605 Prophage endopeptidase tail CPRO_11170 PF01145 SPFH domain / Band 7 family CPRO_11170 PF15975 CPRO_11170 CPRO_11180 PF04892 CPRO_11180 CPRO_11200 PF00753 Metallo-beta-lactamase superfamily CPRO_11210 PF14344 CPRO_11210 CPRO_11220 PF00072 Response regulator receiver domain CPRO_11220 PF00486 Transcriptional regulatory protein, C terminal CPRO_11230 PF00512 His Kinase A (phospho-acceptor) domain CPRO_11230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_11240 PF00005 ABC transporter CPRO_11250 PF02687 CPRO_11250 CPRO_11270 PF01795 MraW methylase family CPRO_11290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPRO_11300 PF03358 NADPH-dependent FMN reductase CPRO_11310 PF13245 Part of AAA domain CPRO_11310 PF13538 UvrD-like helicase C-terminal domain CPRO_11320 PF12833 Helix-turn-helix domain CPRO_11330 PF08002 Protein of unknown function (DUF1697) CPRO_11340 PF12833 Helix-turn-helix domain CPRO_11360 PF12728 Helix-turn-helix domain CPRO_11370 PF00561 alpha/beta hydrolase fold CPRO_11380 PF13788 CPRO_11380 CPRO_11390 PF13649 Methyltransferase domain CPRO_11400 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_11400 PF12120 Rifampin ADP-ribosyl transferase CPRO_11410 PF06445 GyrI-like small molecule binding domain CPRO_11410 PF12833 Helix-turn-helix domain CPRO_11450 PF00005 ABC transporter CPRO_11450 PF00664 ABC transporter transmembrane region CPRO_11460 PF00005 ABC transporter CPRO_11460 PF00664 ABC transporter transmembrane region CPRO_11480 PF14501 GHKL domain CPRO_11490 PF00072 Response regulator receiver domain CPRO_11490 PF04397 LytTr DNA-binding domain CPRO_11510 PF04011 LemA family CPRO_11520 PF09972 CPRO_11520 CPRO_11540 PF00072 Response regulator receiver domain CPRO_11540 PF00486 Transcriptional regulatory protein, C terminal CPRO_11550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_11560 PF00005 ABC transporter CPRO_11570 PF02687 CPRO_11570 CPRO_11580 PF00072 Response regulator receiver domain CPRO_11580 PF00486 Transcriptional regulatory protein, C terminal CPRO_11590 PF00512 His Kinase A (phospho-acceptor) domain CPRO_11590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_11600 PF02557 D-alanyl-D-alanine carboxypeptidase CPRO_11610 PF08765 Mor transcription activator family CPRO_11620 PF08241 Methyltransferase domain CPRO_11630 PF01571 Aminomethyltransferase folate-binding domain CPRO_11630 PF08669 Glycine cleavage T-protein C-terminal barrel domain CPRO_11640 PF01597 Glycine cleavage H-protein CPRO_11670 PF02347 Glycine cleavage system P-protein CPRO_11680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_11680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_11690 PF09860 CPRO_11690 CPRO_11710 PF01381 Helix-turn-helix CPRO_11720 PF13419 Haloacid dehalogenase-like hydrolase CPRO_11730 PF01910 Domain of unknown function DUF77 CPRO_11740 PF00206 Lyase CPRO_11740 PF10415 Fumarase C C-terminus CPRO_11750 PF00395 S-layer homology domain CPRO_11760 PF00390 Malic enzyme, N-terminal domain CPRO_11760 PF03949 Malic enzyme, NAD binding domain CPRO_11770 PF02639 CPRO_11770 CPRO_11780 PF02589 Uncharacterised ACR, YkgG family COG1556 CPRO_11790 PF00588 SpoU rRNA Methylase family CPRO_11800 PF13031 CPRO_11800 CPRO_11810 PF00793 DAHP synthetase I family CPRO_11820 PF02153 Prephenate dehydrogenase CPRO_11830 PF01761 3-dehydroquinate synthase CPRO_11840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_11850 PF01264 Chorismate synthase CPRO_11860 PF00800 Prephenate dehydratase CPRO_11860 PF01817 Chorismate mutase type II CPRO_11870 PF01220 Dehydroquinase class II CPRO_11880 PF00155 Aminotransferase class I and II CPRO_11890 PF02381 MraZ protein CPRO_11910 PF01795 MraW methylase family CPRO_11930 PF00905 Penicillin binding protein transpeptidase domain CPRO_11930 PF03717 Penicillin-binding Protein dimerisation domain CPRO_11930 PF03793 PASTA domain CPRO_11940 PF00905 Penicillin binding protein transpeptidase domain CPRO_11940 PF03717 Penicillin-binding Protein dimerisation domain CPRO_11940 PF03793 PASTA domain CPRO_11950 PF01225 Mur ligase family, catalytic domain CPRO_11950 PF02875 Mur ligase family, glutamate ligase domain CPRO_11950 PF08245 Mur ligase middle domain CPRO_11960 PF01225 Mur ligase family, catalytic domain CPRO_11960 PF02875 Mur ligase family, glutamate ligase domain CPRO_11960 PF08245 Mur ligase middle domain CPRO_11970 PF00953 Glycosyl transferase family 4 CPRO_11970 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CPRO_11980 PF08245 Mur ligase middle domain CPRO_11990 PF01098 CPRO_11990 CPRO_12000 PF01584 CheW-like domain CPRO_12000 PF13682 Chemoreceptor zinc-binding domain CPRO_12010 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_12010 PF08264 Anticodon-binding domain of tRNA CPRO_12010 PF10458 Valyl tRNA synthetase tRNA binding arm CPRO_12030 PF00464 Serine hydroxymethyltransferase CPRO_12040 PF02811 PHP domain CPRO_12050 PF01371 Trp repressor protein CPRO_12060 PF00580 UvrD/REP helicase N-terminal domain CPRO_12060 PF13361 UvrD-like helicase C-terminal domain CPRO_12070 PF00533 BRCA1 C Terminus (BRCT) domain CPRO_12070 PF01653 NAD-dependent DNA ligase adenylation domain CPRO_12070 PF03120 NAD-dependent DNA ligase OB-fold domain CPRO_12070 PF12826 Helix-hairpin-helix motif CPRO_12080 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_12090 PF00005 ABC transporter CPRO_12120 PF00072 Response regulator receiver domain CPRO_12120 PF00563 EAL domain CPRO_12120 PF00990 GGDEF domain CPRO_12120 PF08447 PAS fold CPRO_12130 PF04647 CPRO_12130 CPRO_12140 PF14501 GHKL domain CPRO_12150 PF00072 Response regulator receiver domain CPRO_12150 PF04397 LytTr DNA-binding domain CPRO_12170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_12170 PF12729 CPRO_12170 CPRO_12180 PF00589 Phage integrase family CPRO_12190 PF13487 HD domain CPRO_12210 PF05525 CPRO_12210 CPRO_12220 PF06177 CPRO_12220 CPRO_12230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CPRO_12230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_12240 PF00842 Alanine racemase, C-terminal domain CPRO_12240 PF01168 Alanine racemase, N-terminal domain CPRO_12250 PF13380 CoA binding domain CPRO_12260 PF00581 Rhodanese-like domain CPRO_12260 PF01206 Sulfurtransferase TusA CPRO_12260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_12260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_12260 PF13686 DsrE/DsrF/DrsH-like family CPRO_12270 PF04055 Radical SAM superfamily CPRO_12280 PF00072 Response regulator receiver domain CPRO_12280 PF13690 Chemotaxis phosphatase CheX CPRO_12290 PF13690 Chemotaxis phosphatase CheX CPRO_12300 PF13459 4Fe-4S single cluster domain CPRO_12310 PF07883 Cupin domain CPRO_12320 PF03063 Prismane/CO dehydrogenase family CPRO_12320 PF08984 Domain of unknown function (DUF1858) CPRO_12340 PF01814 Hemerythrin HHE cation binding domain CPRO_12350 PF00027 Cyclic nucleotide-binding domain CPRO_12350 PF13545 Crp-like helix-turn-helix domain CPRO_12360 PF12706 Beta-lactamase superfamily domain CPRO_12370 PF01235 CPRO_12370 CPRO_12390 PF00072 Response regulator receiver domain CPRO_12390 PF00512 His Kinase A (phospho-acceptor) domain CPRO_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_12400 PF00072 Response regulator receiver domain CPRO_12400 PF00990 GGDEF domain CPRO_12410 PF01243 Pyridoxamine 5'-phosphate oxidase CPRO_12430 PF01381 Helix-turn-helix CPRO_12440 PF01494 FAD binding domain CPRO_12460 PF13242 HAD-hyrolase-like CPRO_12460 PF13344 Haloacid dehalogenase-like hydrolase CPRO_12470 PF02562 PhoH-like protein CPRO_12470 PF13638 PIN domain CPRO_12490 PF00462 Glutaredoxin CPRO_12490 PF03477 ATP cone domain CPRO_12490 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPRO_12500 PF04055 Radical SAM superfamily CPRO_12500 PF13353 4Fe-4S single cluster domain CPRO_12510 PF02645 Uncharacterised protein, DegV family COG1307 CPRO_12520 PF02559 CarD-like/TRCF domain CPRO_12530 PF01850 PIN domain CPRO_12530 PF01938 TRAM domain CPRO_12540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CPRO_12550 PF00075 RNase H CPRO_12560 PF00313 'Cold-shock' DNA-binding domain CPRO_12580 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_12580 PF02861 Clp amino terminal domain CPRO_12580 PF07724 AAA domain (Cdc48 subfamily) CPRO_12580 PF10431 C-terminal, D2-small domain, of ClpB protein CPRO_12590 PF00990 GGDEF domain CPRO_12620 PF01205 Uncharacterized protein family UPF0029 CPRO_12620 PF09186 Domain of unknown function (DUF1949) CPRO_12630 PF02311 AraC-like ligand binding domain CPRO_12630 PF12833 Helix-turn-helix domain CPRO_12640 PF00892 EamA-like transporter family CPRO_12650 PF09391 Protein of unknown function (DUF2000) CPRO_12670 PF08279 HTH domain CPRO_12670 PF13280 CPRO_12670 CPRO_12680 PF14526 Integron-associated effector binding protein CPRO_12690 PF14268 CPRO_12690 CPRO_12700 PF04055 Radical SAM superfamily CPRO_12710 PF01645 Conserved region in glutamate synthase CPRO_12720 PF05161 MOFRL family CPRO_12720 PF13660 Domain of unknown function (DUF4147) CPRO_12730 PF04073 Aminoacyl-tRNA editing domain CPRO_12740 PF00919 Uncharacterized protein family UPF0004 CPRO_12740 PF01938 TRAM domain CPRO_12740 PF04055 Radical SAM superfamily CPRO_12750 PF06133 Protein of unknown function (DUF964) CPRO_12760 PF00488 MutS domain V CPRO_12760 PF01624 MutS domain I CPRO_12760 PF05188 MutS domain II CPRO_12760 PF05190 MutS family domain IV CPRO_12760 PF05192 MutS domain III CPRO_12770 PF01119 DNA mismatch repair protein, C-terminal domain CPRO_12770 PF08676 MutL C terminal dimerisation domain CPRO_12770 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_12780 PF01715 IPP transferase CPRO_12790 PF06541 CPRO_12790 CPRO_12800 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_12800 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_12810 PF02645 Uncharacterised protein, DegV family COG1307 CPRO_12820 PF01131 DNA topoisomerase CPRO_12820 PF01751 Toprim domain CPRO_12830 PF06838 Methionine gamma-lyase CPRO_12840 PF06044 Dam-replacing family CPRO_12850 PF01943 CPRO_12850 CPRO_12850 PF14667 Polysaccharide biosynthesis C-terminal domain CPRO_12860 PF13520 Amino acid permease CPRO_12870 PF01899 CPRO_12870 CPRO_12880 PF04066 CPRO_12880 CPRO_12890 PF03334 CPRO_12890 CPRO_12900 PF13244 CPRO_12900 CPRO_12910 PF04039 CPRO_12910 CPRO_12920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CPRO_12930 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CPRO_12940 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CPRO_12940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPRO_12950 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CPRO_12950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CPRO_12960 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CPRO_12970 PF02424 ApbE family CPRO_12990 PF00440 Bacterial regulatory proteins, tetR family CPRO_13010 PF00990 GGDEF domain CPRO_13020 PF00005 ABC transporter CPRO_13030 PF13673 Acetyltransferase (GNAT) domain CPRO_13040 PF02673 CPRO_13040 CPRO_13050 PF03551 Transcriptional regulator PadR-like family CPRO_13050 PF10400 Virulence activator alpha C-term CPRO_13060 PF12801 CPRO_13060 CPRO_13060 PF13746 4Fe-4S dicluster domain CPRO_13070 PF12682 Flavodoxin CPRO_13120 PF00027 Cyclic nucleotide-binding domain CPRO_13120 PF13545 Crp-like helix-turn-helix domain CPRO_13130 PF04657 CPRO_13130 CPRO_13140 PF04657 CPRO_13140 CPRO_13150 PF06908 Protein of unknown function (DUF1273) CPRO_13170 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system CPRO_13180 PF06769 Plasmid encoded toxin Txe CPRO_13190 PF00239 Resolvase, N terminal domain CPRO_13200 PF11185 CPRO_13200 CPRO_13220 PF13289 CPRO_13220 CPRO_13280 PF00395 S-layer homology domain CPRO_13310 PF08937 MTH538 TIR-like domain (DUF1863) CPRO_13320 PF08937 MTH538 TIR-like domain (DUF1863) CPRO_13330 PF13289 CPRO_13330 CPRO_13350 PF13676 TIR domain CPRO_13360 PF02661 Fic/DOC family CPRO_13390 PF14198 CPRO_13390 CPRO_13400 PF01076 Plasmid recombination enzyme CPRO_13420 PF13481 AAA domain CPRO_13440 PF00589 Phage integrase family CPRO_13440 PF14657 CPRO_13440 CPRO_13440 PF14659 Phage integrase, N-terminal SAM-like domain CPRO_13460 PF01381 Helix-turn-helix CPRO_13480 PF00117 Glutamine amidotransferase class-I CPRO_13480 PF00958 GMP synthase C terminal domain CPRO_13480 PF02540 NAD synthase CPRO_13490 PF00860 Permease family CPRO_13500 PF00365 Phosphofructokinase CPRO_13520 PF00128 Alpha amylase, catalytic domain CPRO_13520 PF02903 Alpha amylase, N-terminal ig-like domain CPRO_13530 PF00849 RNA pseudouridylate synthase CPRO_13540 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_13540 PF02861 Clp amino terminal domain CPRO_13540 PF07724 AAA domain (Cdc48 subfamily) CPRO_13540 PF10431 C-terminal, D2-small domain, of ClpB protein CPRO_13560 PF13481 AAA domain CPRO_13570 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CPRO_13570 PF00364 Biotin-requiring enzyme CPRO_13570 PF00682 HMGL-like CPRO_13570 PF02436 Conserved carboxylase domain CPRO_13570 PF02785 Biotin carboxylase C-terminal domain CPRO_13570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_13590 PF09560 CPRO_13590 CPRO_13600 PF00905 Penicillin binding protein transpeptidase domain CPRO_13600 PF00912 Transglycosylase CPRO_13610 PF03099 Biotin/lipoate A/B protein ligase family CPRO_13610 PF10437 Bacterial lipoate protein ligase C-terminus CPRO_13630 PF00239 Resolvase, N terminal domain CPRO_13630 PF07508 Recombinase CPRO_13630 PF13408 Recombinase zinc beta ribbon domain CPRO_13640 PF14020 CPRO_13640 CPRO_13650 PF00533 BRCA1 C Terminus (BRCT) domain CPRO_13650 PF00929 Exonuclease CPRO_13660 PF08780 Nucleotidyltransferase substrate binding protein like CPRO_13670 PF01909 Nucleotidyltransferase domain CPRO_13680 PF13443 Cro/C1-type HTH DNA-binding domain CPRO_13730 PF04014 Antidote-toxin recognition MazE CPRO_13780 PF02086 D12 class N6 adenine-specific DNA methyltransferase CPRO_13790 PF03838 Recombination protein U CPRO_13830 PF05876 CPRO_13830 CPRO_13850 PF05136 CPRO_13850 CPRO_13860 PF04586 CPRO_13860 CPRO_13870 PF10124 CPRO_13870 CPRO_13880 PF09956 CPRO_13880 CPRO_13910 PF06763 CPRO_13910 CPRO_13950 PF04985 CPRO_13950 CPRO_13960 PF10109 CPRO_13960 CPRO_13970 PF10145 CPRO_13970 CPRO_14010 PF06995 CPRO_14010 CPRO_14030 PF04865 CPRO_14030 CPRO_14040 PF09684 CPRO_14040 CPRO_14050 PF03406 CPRO_14050 CPRO_14080 PF09693 CPRO_14080 CPRO_14120 PF13529 Peptidase_C39 like family CPRO_14130 PF02086 D12 class N6 adenine-specific DNA methyltransferase CPRO_14140 PF13443 Cro/C1-type HTH DNA-binding domain CPRO_14160 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_14170 PF13304 AAA domain CPRO_14220 PF03496 ADP-ribosyltransferase exoenzyme CPRO_14230 PF14088 CPRO_14230 CPRO_14250 PF00817 impB/mucB/samB family CPRO_14250 PF11799 impB/mucB/samB family C-terminal domain CPRO_14260 PF02586 Uncharacterised ACR, COG2135 CPRO_14270 PF01522 Polysaccharide deacetylase CPRO_14280 PF00294 pfkB family carbohydrate kinase CPRO_14280 PF13412 Winged helix-turn-helix DNA-binding CPRO_14290 PF04227 Indigoidine synthase A like protein CPRO_14300 PF04055 Radical SAM superfamily CPRO_14310 PF12669 CPRO_14310 CPRO_14330 PF00571 CBS domain CPRO_14330 PF03471 Transporter associated domain CPRO_14340 PF00210 Ferritin-like domain CPRO_14350 PF14344 CPRO_14350 CPRO_14360 PF02441 Flavoprotein CPRO_14360 PF04127 DNA / pantothenate metabolism flavoprotein CPRO_14370 PF00437 Type II/IV secretion system protein CPRO_14380 PF00486 Transcriptional regulatory protein, C terminal CPRO_14380 PF03704 Bacterial transcriptional activator domain CPRO_14390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_14390 PF00672 HAMP domain CPRO_14390 PF02743 Cache domain CPRO_14400 PF00085 Thioredoxin CPRO_14410 PF00881 Nitroreductase family CPRO_14410 PF13237 4Fe-4S dicluster domain CPRO_14420 PF03063 Prismane/CO dehydrogenase family CPRO_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_14430 PF03466 LysR substrate binding domain CPRO_14440 PF04055 Radical SAM superfamily CPRO_14440 PF13353 4Fe-4S single cluster domain CPRO_14450 PF01228 Glycine radical CPRO_14450 PF02901 Pyruvate formate lyase CPRO_14460 PF07664 CPRO_14460 CPRO_14460 PF07670 Nucleoside recognition CPRO_14480 PF00239 Resolvase, N terminal domain CPRO_14480 PF07508 Recombinase CPRO_14490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_14490 PF12729 CPRO_14490 CPRO_14510 PF07995 Glucose / Sorbosone dehydrogenase CPRO_14520 PF01926 50S ribosome-binding GTPase CPRO_14530 PF04055 Radical SAM superfamily CPRO_14530 PF06968 Biotin and Thiamin Synthesis associated domain CPRO_14540 PF04055 Radical SAM superfamily CPRO_14560 PF00239 Resolvase, N terminal domain CPRO_14560 PF07508 Recombinase CPRO_14560 PF13408 Recombinase zinc beta ribbon domain CPRO_14580 PF00512 His Kinase A (phospho-acceptor) domain CPRO_14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_14590 PF00072 Response regulator receiver domain CPRO_14590 PF00486 Transcriptional regulatory protein, C terminal CPRO_14620 PF00005 ABC transporter CPRO_14630 PF00196 Bacterial regulatory proteins, luxR family CPRO_14640 PF00202 Aminotransferase class-III CPRO_14650 PF00171 Aldehyde dehydrogenase family CPRO_14660 PF03553 CPRO_14660 CPRO_14670 PF04542 Sigma-70 region 2 CPRO_14670 PF08281 Sigma-70, region 4 CPRO_14690 PF12671 CPRO_14690 CPRO_14700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPRO_14750 PF02421 Ferrous iron transport protein B CPRO_14760 PF04023 FeoA domain CPRO_14770 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPRO_14770 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPRO_14780 PF08241 Methyltransferase domain CPRO_14790 PF03551 Transcriptional regulator PadR-like family CPRO_14790 PF10400 Virulence activator alpha C-term CPRO_14800 PF02638 CPRO_14800 CPRO_14800 PF07833 Copper amine oxidase N-terminal domain CPRO_14810 PF01202 Shikimate kinase CPRO_14810 PF08501 Shikimate dehydrogenase substrate binding domain CPRO_14820 PF03773 CPRO_14820 CPRO_14840 PF01047 MarR family CPRO_14850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_14850 PF00672 HAMP domain CPRO_14850 PF12729 CPRO_14850 CPRO_14860 PF12681 Glyoxalase-like domain CPRO_14870 PF04295 CPRO_14870 CPRO_14880 PF08666 SAF domain CPRO_14900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_14900 PF03129 Anticodon binding domain CPRO_14900 PF09180 Prolyl-tRNA synthetase, C-terminal CPRO_14910 PF00857 Isochorismatase family CPRO_14920 PF02073 Thermophilic metalloprotease (M29) CPRO_14930 PF00654 Voltage gated chloride channel CPRO_14940 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_14950 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_14960 PF00005 ABC transporter CPRO_14970 PF01906 Putative heavy-metal-binding CPRO_14980 PF01544 CorA-like Mg2+ transporter protein CPRO_14990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CPRO_14990 PF02824 TGS domain CPRO_14990 PF03129 Anticodon binding domain CPRO_14990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_15000 PF00707 Translation initiation factor IF-3, C-terminal domain CPRO_15000 PF05198 Translation initiation factor IF-3, N-terminal domain CPRO_15010 PF01632 Ribosomal protein L35 CPRO_15020 PF00453 Ribosomal protein L20 CPRO_15030 PF03547 CPRO_15030 CPRO_15040 PF01381 Helix-turn-helix CPRO_15040 PF07883 Cupin domain CPRO_15060 PF00202 Aminotransferase class-III CPRO_15080 PF01048 Phosphorylase superfamily CPRO_15090 PF04657 CPRO_15090 CPRO_15100 PF04657 CPRO_15100 CPRO_15110 PF00294 pfkB family carbohydrate kinase CPRO_15120 PF02525 Flavodoxin-like fold CPRO_15130 PF00107 Zinc-binding dehydrogenase CPRO_15130 PF08240 Alcohol dehydrogenase GroES-like domain CPRO_15140 PF00149 Calcineurin-like phosphoesterase CPRO_15140 PF12320 Type 5 capsule protein repressor C-terminal domain CPRO_15150 PF13476 AAA domain CPRO_15160 PF13558 Putative exonuclease SbcCD, C subunit CPRO_15170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPRO_15170 PF16924 CPRO_15170 CPRO_15180 PF02441 Flavoprotein CPRO_15190 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_15200 PF04204 Homoserine O-succinyltransferase CPRO_15210 PF08486 CPRO_15210 CPRO_15230 PF02547 Queuosine biosynthesis protein CPRO_15240 PF05496 Holliday junction DNA helicase ruvB N-terminus CPRO_15240 PF12002 MgsA AAA+ ATPase C terminal CPRO_15240 PF16193 CPRO_15240 CPRO_15250 PF01409 tRNA synthetases class II core domain (F) CPRO_15250 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CPRO_15260 PF01588 Putative tRNA binding domain CPRO_15260 PF03147 Ferredoxin-fold anticodon binding domain CPRO_15260 PF03483 B3/4 domain CPRO_15260 PF03484 tRNA synthetase B5 domain CPRO_15270 PF00669 Bacterial flagellin N-terminal helical region CPRO_15270 PF00700 Bacterial flagellin C-terminal helical region CPRO_15280 PF00072 Response regulator receiver domain CPRO_15280 PF00563 EAL domain CPRO_15280 PF00990 GGDEF domain CPRO_15280 PF13188 PAS domain CPRO_15290 PF00009 Elongation factor Tu GTP binding domain CPRO_15290 PF00679 Elongation factor G C-terminus CPRO_15290 PF03144 Elongation factor Tu domain 2 CPRO_15300 PF01943 CPRO_15300 CPRO_15300 PF14667 Polysaccharide biosynthesis C-terminal domain CPRO_15310 PF08757 CPRO_15310 CPRO_15320 PF01541 GIY-YIG catalytic domain CPRO_15320 PF02151 UvrB/uvrC motif CPRO_15320 PF08459 UvrC Helix-hairpin-helix N-terminal CPRO_15320 PF12826 Helix-hairpin-helix motif CPRO_15330 PF02603 HPr Serine kinase N terminus CPRO_15330 PF07475 HPr Serine kinase C-terminal domain CPRO_15340 PF01565 FAD binding domain CPRO_15340 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CPRO_15350 PF03668 CPRO_15350 CPRO_15360 PF02650 WhiA C-terminal HTH domain CPRO_15360 PF10298 WhiA N-terminal LAGLIDADG-like domain CPRO_15360 PF14527 WhiA LAGLIDADG-like domain CPRO_15370 PF00381 PTS HPr component phosphorylation site CPRO_15380 PF01170 Putative RNA methylase family UPF0020 CPRO_15380 PF02926 THUMP domain CPRO_15390 PF01702 Queuine tRNA-ribosyltransferase CPRO_15400 PF02699 Preprotein translocase subunit CPRO_15410 PF02608 Basic membrane protein CPRO_15420 PF00005 ABC transporter CPRO_15430 PF02653 CPRO_15430 CPRO_15440 PF02653 CPRO_15440 CPRO_15450 PF01156 Inosine-uridine preferring nucleoside hydrolase CPRO_15460 PF01156 Inosine-uridine preferring nucleoside hydrolase CPRO_15470 PF01476 LysM domain CPRO_15480 PF02915 Rubrerythrin CPRO_15490 PF00675 Insulinase (Peptidase family M16) CPRO_15490 PF05193 Peptidase M16 inactive domain CPRO_15490 PF08367 Peptidase M16C associated CPRO_15500 PF00583 Acetyltransferase (GNAT) family CPRO_15510 PF01551 Peptidase family M23 CPRO_15520 PF01648 4'-phosphopantetheinyl transferase superfamily CPRO_15530 PF00133 tRNA synthetases class I (I, L, M and V) CPRO_15530 PF08264 Anticodon-binding domain of tRNA CPRO_15530 PF09334 tRNA synthetases class I (M) CPRO_15530 PF13603 Leucyl-tRNA synthetase, Domain 2 CPRO_15540 PF00005 ABC transporter CPRO_15540 PF00664 ABC transporter transmembrane region CPRO_15550 PF00005 ABC transporter CPRO_15550 PF00664 ABC transporter transmembrane region CPRO_15560 PF01047 MarR family CPRO_15570 PF03006 CPRO_15570 CPRO_15580 PF08876 CPRO_15580 CPRO_15590 PF00929 Exonuclease CPRO_15590 PF02811 PHP domain CPRO_15590 PF07733 Bacterial DNA polymerase III alpha subunit CPRO_15590 PF11490 CPRO_15590 CPRO_15590 PF14480 CPRO_15590 CPRO_15590 PF14579 Helix-hairpin-helix motif CPRO_15600 PF04551 GcpE protein CPRO_15610 PF02163 Peptidase family M50 CPRO_15610 PF13180 PDZ domain CPRO_15620 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CPRO_15620 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CPRO_15620 PF13288 DXP reductoisomerase C-terminal domain CPRO_15630 PF01148 Cytidylyltransferase family CPRO_15640 PF01255 Putative undecaprenyl diphosphate synthase CPRO_15650 PF01765 Ribosome recycling factor CPRO_15660 PF00696 Amino acid kinase family CPRO_15670 PF00889 Elongation factor TS CPRO_15680 PF00318 Ribosomal protein S2 CPRO_15690 PF01131 DNA topoisomerase CPRO_15690 PF01396 CPRO_15690 CPRO_15690 PF01751 Toprim domain CPRO_15700 PF02481 DNA recombination-mediator protein A CPRO_15710 PF01078 Magnesium chelatase, subunit ChlI CPRO_15710 PF13335 CPRO_15710 CPRO_15710 PF13541 Subunit ChlI of Mg-chelatase CPRO_15720 PF06912 CPRO_15720 CPRO_15730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_15730 PF02743 Cache domain CPRO_15740 PF01966 HD domain CPRO_15760 PF00082 Subtilase family CPRO_15770 PF00082 Subtilase family CPRO_15780 PF01471 Putative peptidoglycan binding domain CPRO_15790 PF00563 EAL domain CPRO_15790 PF00571 CBS domain CPRO_15790 PF00990 GGDEF domain CPRO_15800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_15810 PF02666 CPRO_15810 CPRO_15820 PF01066 CDP-alcohol phosphatidyltransferase CPRO_15830 PF03706 CPRO_15830 CPRO_15840 PF03547 CPRO_15840 CPRO_15850 PF05525 CPRO_15850 CPRO_15860 PF00155 Aminotransferase class I and II CPRO_15870 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CPRO_15870 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CPRO_15880 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_15890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_15890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_15890 PF13237 4Fe-4S dicluster domain CPRO_15900 PF00392 Bacterial regulatory proteins, gntR family CPRO_15900 PF07729 FCD domain CPRO_15920 PF03060 Nitronate monooxygenase CPRO_15930 PF01964 ThiC family CPRO_15940 PF02581 Thiamine monophosphate synthase/TENI CPRO_15950 PF04055 Radical SAM superfamily CPRO_15950 PF06968 Biotin and Thiamin Synthesis associated domain CPRO_15960 PF05690 Thiazole biosynthesis protein ThiG CPRO_15970 PF00899 ThiF family CPRO_15980 PF02597 ThiS family CPRO_15990 PF02632 BioY family CPRO_16000 PF04055 Radical SAM superfamily CPRO_16000 PF06968 Biotin and Thiamin Synthesis associated domain CPRO_16010 PF13500 AAA domain CPRO_16020 PF00202 Aminotransferase class-III CPRO_16030 PF00753 Metallo-beta-lactamase superfamily CPRO_16040 PF00873 AcrB/AcrD/AcrF family CPRO_16050 PF13533 Biotin-lipoyl like CPRO_16050 PF16576 CPRO_16050 CPRO_16060 PF00440 Bacterial regulatory proteins, tetR family CPRO_16070 PF00578 AhpC/TSA family CPRO_16090 PF12900 Pyridoxamine 5'-phosphate oxidase CPRO_16130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPRO_16140 PF03063 Prismane/CO dehydrogenase family CPRO_16150 PF02447 CPRO_16150 CPRO_16160 PF00378 Enoyl-CoA hydratase/isomerase family CPRO_16170 PF01144 Coenzyme A transferase CPRO_16180 PF00158 Sigma-54 interaction domain CPRO_16180 PF02954 Bacterial regulatory protein, Fis family CPRO_16190 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_16190 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_16190 PF10371 Domain of unknown function CPRO_16190 PF12838 4Fe-4S dicluster domain CPRO_16190 PF17147 CPRO_16190 CPRO_16200 PF12655 CPRO_16200 CPRO_16210 PF00355 Rieske [2Fe-2S] domain CPRO_16210 PF01266 FAD dependent oxidoreductase CPRO_16220 PF05067 Manganese containing catalase CPRO_16270 PF00171 Aldehyde dehydrogenase family CPRO_16290 PF00701 Dihydrodipicolinate synthetase family CPRO_16300 PF01266 FAD dependent oxidoreductase CPRO_16310 PF04324 BFD-like [2Fe-2S] binding domain CPRO_16320 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_16330 PF13510 2Fe-2S iron-sulfur cluster binding domain CPRO_16350 PF00209 Sodium:neurotransmitter symporter family CPRO_16370 PF12833 Helix-turn-helix domain CPRO_16380 PF01613 Flavin reductase like domain CPRO_16390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_16390 PF00672 HAMP domain CPRO_16390 PF02743 Cache domain CPRO_16410 PF00892 EamA-like transporter family CPRO_16420 PF01638 HxlR-like helix-turn-helix CPRO_16430 PF01243 Pyridoxamine 5'-phosphate oxidase CPRO_16440 PF00512 His Kinase A (phospho-acceptor) domain CPRO_16440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_16440 PF13493 Domain of unknown function (DUF4118) CPRO_16450 PF00072 Response regulator receiver domain CPRO_16450 PF00486 Transcriptional regulatory protein, C terminal CPRO_16470 PF02254 TrkA-N domain CPRO_16480 PF02080 TrkA-C domain CPRO_16480 PF02254 TrkA-N domain CPRO_16490 PF02386 Cation transport protein CPRO_16500 PF00111 2Fe-2S iron-sulfur cluster binding domain CPRO_16500 PF01799 [2Fe-2S] binding domain CPRO_16510 PF00941 FAD binding domain in molybdopterin dehydrogenase CPRO_16520 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CPRO_16520 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CPRO_16530 PF04226 CPRO_16530 CPRO_16550 PF07883 Cupin domain CPRO_16560 PF01738 Dienelactone hydrolase family CPRO_16570 PF11750 CPRO_16570 CPRO_16580 PF16264 CPRO_16580 CPRO_16590 PF00395 S-layer homology domain CPRO_16590 PF05345 Putative Ig domain CPRO_16590 PF12733 CPRO_16590 CPRO_16600 PF00754 F5/8 type C domain CPRO_16600 PF12733 CPRO_16600 CPRO_16610 PF07484 Phage Tail Collar Domain CPRO_16620 PF07484 Phage Tail Collar Domain CPRO_16640 PF12746 GNAT acetyltransferase CPRO_16650 PF12681 Glyoxalase-like domain CPRO_16660 PF01565 FAD binding domain CPRO_16660 PF08031 Berberine and berberine like CPRO_16670 PF07505 CPRO_16670 CPRO_16680 PF04237 YjbR CPRO_16690 PF12724 Flavodoxin domain CPRO_16700 PF12802 MarR family CPRO_16710 PF01022 Bacterial regulatory protein, arsR family CPRO_16720 PF03773 CPRO_16720 CPRO_16730 PF13192 Thioredoxin domain CPRO_16740 PF01758 Sodium Bile acid symporter family CPRO_16750 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPRO_16760 PF03649 CPRO_16760 CPRO_16770 PF00005 ABC transporter CPRO_16780 PF03551 Transcriptional regulator PadR-like family CPRO_16790 PF06445 GyrI-like small molecule binding domain CPRO_16790 PF12833 Helix-turn-helix domain CPRO_16800 PF01554 MatE CPRO_16820 PF00512 His Kinase A (phospho-acceptor) domain CPRO_16820 PF00672 HAMP domain CPRO_16820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_16830 PF00072 Response regulator receiver domain CPRO_16830 PF00486 Transcriptional regulatory protein, C terminal CPRO_16850 PF12802 MarR family CPRO_16860 PF01554 MatE CPRO_16870 PF00334 Nucleoside diphosphate kinase CPRO_16880 PF00440 Bacterial regulatory proteins, tetR family CPRO_16890 PF00005 ABC transporter CPRO_16900 PF02687 CPRO_16900 CPRO_16910 PF13437 HlyD family secretion protein CPRO_16910 PF13533 Biotin-lipoyl like CPRO_16930 PF03576 Peptidase family S58 CPRO_16940 PF03169 CPRO_16940 CPRO_16950 PF07969 Amidohydrolase family CPRO_16960 PF00474 Sodium:solute symporter family CPRO_16970 PF06196 CPRO_16970 CPRO_16980 PF02558 Ketopantoate reductase PanE/ApbA CPRO_16980 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPRO_16990 PF02548 Ketopantoate hydroxymethyltransferase CPRO_17000 PF01614 Bacterial transcriptional regulator CPRO_17000 PF09339 IclR helix-turn-helix domain CPRO_17010 PF00563 EAL domain CPRO_17010 PF08668 HDOD domain CPRO_17020 PF14501 GHKL domain CPRO_17030 PF00072 Response regulator receiver domain CPRO_17030 PF04397 LytTr DNA-binding domain CPRO_17040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_17040 PF02743 Cache domain CPRO_17060 PF00395 S-layer homology domain CPRO_17060 PF03442 Carbohydrate binding domain X2 CPRO_17060 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) CPRO_17130 PF12730 CPRO_17130 CPRO_17140 PF00005 ABC transporter CPRO_17150 PF00072 Response regulator receiver domain CPRO_17150 PF00486 Transcriptional regulatory protein, C terminal CPRO_17160 PF00512 His Kinase A (phospho-acceptor) domain CPRO_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_17170 PF00395 S-layer homology domain CPRO_17170 PF14252 CPRO_17170 CPRO_17190 PF02906 Iron only hydrogenase large subunit, C-terminal domain CPRO_17200 PF07228 Stage II sporulation protein E (SpoIIE) CPRO_17200 PF13581 Histidine kinase-like ATPase domain CPRO_17210 PF01554 MatE CPRO_17220 PF09924 Uncharacterized conserved protein (DUF2156) CPRO_17230 PF00551 Formyl transferase CPRO_17240 PF13466 STAS domain CPRO_17250 PF04055 Radical SAM superfamily CPRO_17250 PF13186 Iron-sulfur cluster-binding domain CPRO_17250 PF13394 4Fe-4S single cluster domain CPRO_17280 PF00005 ABC transporter CPRO_17280 PF00664 ABC transporter transmembrane region CPRO_17290 PF00005 ABC transporter CPRO_17290 PF00664 ABC transporter transmembrane region CPRO_17290 PF03412 Peptidase C39 family CPRO_17310 PF00990 GGDEF domain CPRO_17340 PF00149 Calcineurin-like phosphoesterase CPRO_17350 PF07729 FCD domain CPRO_17370 PF00440 Bacterial regulatory proteins, tetR family CPRO_17380 PF07690 Major Facilitator Superfamily CPRO_17390 PF10057 CPRO_17390 CPRO_17410 PF02597 ThiS family CPRO_17420 PF02597 ThiS family CPRO_17430 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 CPRO_17430 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain CPRO_17440 PF00994 Probable molybdopterin binding domain CPRO_17460 PF01967 MoaC family CPRO_17470 PF04055 Radical SAM superfamily CPRO_17470 PF06463 Molybdenum Cofactor Synthesis C CPRO_17470 PF13353 4Fe-4S single cluster domain CPRO_17480 PF00994 Probable molybdopterin binding domain CPRO_17480 PF03453 MoeA N-terminal region (domain I and II) CPRO_17480 PF03454 MoeA C-terminal region (domain IV) CPRO_17480 PF12727 PBP superfamily domain CPRO_17490 PF00994 Probable molybdopterin binding domain CPRO_17490 PF03453 MoeA N-terminal region (domain I and II) CPRO_17490 PF03454 MoeA C-terminal region (domain IV) CPRO_17500 PF00005 ABC transporter CPRO_17510 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_17520 PF12849 PBP superfamily domain CPRO_17530 PF00899 ThiF family CPRO_17560 PF01344 Kelch motif CPRO_17570 PF06803 CPRO_17570 CPRO_17580 PF00113 Enolase, C-terminal TIM barrel domain CPRO_17600 PF12733 CPRO_17600 CPRO_17610 PF05345 Putative Ig domain CPRO_17630 PF12733 CPRO_17630 CPRO_17640 PF00754 F5/8 type C domain CPRO_17650 PF07484 Phage Tail Collar Domain CPRO_17660 PF07484 Phage Tail Collar Domain CPRO_17690 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_17720 PF00580 UvrD/REP helicase N-terminal domain CPRO_17720 PF13361 UvrD-like helicase C-terminal domain CPRO_17730 PF13175 AAA ATPase domain CPRO_17740 PF07205 CPRO_17740 CPRO_17750 PF00239 Resolvase, N terminal domain CPRO_17750 PF07508 Recombinase CPRO_17750 PF13408 Recombinase zinc beta ribbon domain CPRO_17760 PF13408 Recombinase zinc beta ribbon domain CPRO_17770 PF00239 Resolvase, N terminal domain CPRO_17770 PF07508 Recombinase CPRO_17770 PF13408 Recombinase zinc beta ribbon domain CPRO_17780 PF00239 Resolvase, N terminal domain CPRO_17780 PF07508 Recombinase CPRO_17780 PF13408 Recombinase zinc beta ribbon domain CPRO_17790 PF00239 Resolvase, N terminal domain CPRO_17790 PF07508 Recombinase CPRO_17790 PF13408 Recombinase zinc beta ribbon domain CPRO_17820 PF03773 CPRO_17820 CPRO_17830 PF03773 CPRO_17830 CPRO_17840 PF01869 BadF/BadG/BcrA/BcrD ATPase family CPRO_17840 PF09989 CPRO_17840 CPRO_17850 PF07883 Cupin domain CPRO_17860 PF07883 Cupin domain CPRO_17870 PF00005 ABC transporter CPRO_17880 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_17890 PF09084 NMT1/THI5 like CPRO_17900 PF00027 Cyclic nucleotide-binding domain CPRO_17900 PF13545 Crp-like helix-turn-helix domain CPRO_17910 PF03063 Prismane/CO dehydrogenase family CPRO_17920 PF00301 Rubredoxin CPRO_17940 PF03773 CPRO_17940 CPRO_17940 PF13370 4Fe-4S single cluster domain CPRO_17950 PF03773 CPRO_17950 CPRO_17960 PF00027 Cyclic nucleotide-binding domain CPRO_17960 PF13545 Crp-like helix-turn-helix domain CPRO_17970 PF00027 Cyclic nucleotide-binding domain CPRO_17970 PF13545 Crp-like helix-turn-helix domain CPRO_17980 PF12706 Beta-lactamase superfamily domain CPRO_17990 PF00027 Cyclic nucleotide-binding domain CPRO_17990 PF13545 Crp-like helix-turn-helix domain CPRO_18000 PF10006 CPRO_18000 CPRO_18010 PF01814 Hemerythrin HHE cation binding domain CPRO_18030 PF03063 Prismane/CO dehydrogenase family CPRO_18030 PF08984 Domain of unknown function (DUF1858) CPRO_18040 PF07883 Cupin domain CPRO_18050 PF13370 4Fe-4S single cluster domain CPRO_18080 PF14082 CPRO_18080 CPRO_18090 PF00665 Integrase core domain CPRO_18090 PF13276 CPRO_18090 CPRO_18100 PF01527 Transposase CPRO_18110 PF00350 Dynamin family CPRO_18120 PF01546 Peptidase family M20/M25/M40 CPRO_18120 PF07687 Peptidase dimerisation domain CPRO_18130 PF03606 CPRO_18130 CPRO_18140 PF01546 Peptidase family M20/M25/M40 CPRO_18150 PF00158 Sigma-54 interaction domain CPRO_18160 PF00990 GGDEF domain CPRO_18170 PF00989 PAS fold CPRO_18170 PF00990 GGDEF domain CPRO_18170 PF01966 HD domain CPRO_18170 PF08269 Cache domain CPRO_18180 PF00578 AhpC/TSA family CPRO_18190 PF00892 EamA-like transporter family CPRO_18200 PF00158 Sigma-54 interaction domain CPRO_18200 PF13426 PAS domain CPRO_18220 PF00872 CPRO_18220 CPRO_18230 PF07969 Amidohydrolase family CPRO_18270 PF00665 Integrase core domain CPRO_18270 PF13276 CPRO_18270 CPRO_18280 PF01527 Transposase CPRO_18290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_18290 PF08388 CPRO_18290 CPRO_18310 PF02810 SEC-C motif CPRO_18330 PF00580 UvrD/REP helicase N-terminal domain CPRO_18340 PF13175 AAA ATPase domain CPRO_18350 PF04326 Divergent AAA domain CPRO_18380 PF13443 Cro/C1-type HTH DNA-binding domain CPRO_18390 PF07508 Recombinase CPRO_18390 PF13408 Recombinase zinc beta ribbon domain CPRO_18400 PF00239 Resolvase, N terminal domain CPRO_18400 PF07508 Recombinase CPRO_18400 PF13408 Recombinase zinc beta ribbon domain CPRO_18410 PF00239 Resolvase, N terminal domain CPRO_18410 PF07508 Recombinase CPRO_18410 PF13408 Recombinase zinc beta ribbon domain CPRO_18420 PF00239 Resolvase, N terminal domain CPRO_18420 PF07508 Recombinase CPRO_18420 PF13408 Recombinase zinc beta ribbon domain CPRO_18440 PF07638 ECF sigma factor CPRO_18450 PF07833 Copper amine oxidase N-terminal domain CPRO_18460 PF01527 Transposase CPRO_18470 PF00665 Integrase core domain CPRO_18470 PF13276 CPRO_18470 CPRO_18490 PF02493 MORN repeat CPRO_18490 PF13676 TIR domain CPRO_18520 PF00665 Integrase core domain CPRO_18520 PF13936 Helix-turn-helix domain CPRO_18550 PF02229 Transcriptional Coactivator p15 (PC4) CPRO_18560 PF04851 Type III restriction enzyme, res subunit CPRO_18570 PF01555 DNA methylase CPRO_18580 PF14335 CPRO_18580 CPRO_18590 PF00176 SNF2 family N-terminal domain CPRO_18590 PF00271 Helicase conserved C-terminal domain CPRO_18630 PF13240 CPRO_18630 CPRO_18640 PF00565 Staphylococcal nuclease homologue CPRO_18640 PF08378 CPRO_18640 CPRO_18660 PF03432 CPRO_18660 CPRO_18670 PF05713 CPRO_18670 CPRO_18690 PF00271 Helicase conserved C-terminal domain CPRO_18700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_18700 PF01844 HNH endonuclease CPRO_18720 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_18730 PF03869 Arc-like DNA binding domain CPRO_18740 PF01381 Helix-turn-helix CPRO_18750 PF05973 CPRO_18750 CPRO_18760 PF14195 CPRO_18760 CPRO_18770 PF01131 DNA topoisomerase CPRO_18770 PF01751 Toprim domain CPRO_18780 PF14283 CPRO_18780 CPRO_18790 PF14193 CPRO_18790 CPRO_18810 PF00877 NlpC/P60 family CPRO_18830 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_18830 PF01348 CPRO_18830 CPRO_18860 PF12666 CPRO_18860 CPRO_18870 PF12960 CPRO_18870 CPRO_18900 PF12750 CPRO_18900 CPRO_18910 PF02534 Type IV secretory system Conjugative DNA transfer CPRO_18920 PF12687 CPRO_18920 CPRO_18930 PF00395 S-layer homology domain CPRO_18940 PF06970 Replication initiator protein A (RepA) N-terminus CPRO_18950 PF02195 ParB-like nuclease domain CPRO_18960 PF13614 AAA domain CPRO_18970 PF07508 Recombinase CPRO_18980 PF00239 Resolvase, N terminal domain CPRO_18980 PF07508 Recombinase CPRO_18980 PF13408 Recombinase zinc beta ribbon domain CPRO_19030 PF00873 AcrB/AcrD/AcrF family CPRO_19040 PF16576 CPRO_19040 CPRO_19050 PF13187 4Fe-4S dicluster domain CPRO_19060 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) CPRO_19070 PF00440 Bacterial regulatory proteins, tetR family CPRO_19080 PF01797 Transposase IS200 like CPRO_19090 PF13730 CPRO_19090 CPRO_19100 PF02534 Type IV secretory system Conjugative DNA transfer CPRO_19110 PF00753 Metallo-beta-lactamase superfamily CPRO_19120 PF13154 CPRO_19120 CPRO_19120 PF13155 Toprim-like CPRO_19130 PF08238 Sel1 repeat CPRO_19170 PF12957 CPRO_19170 CPRO_19180 PF00877 NlpC/P60 family CPRO_19190 PF08241 Methyltransferase domain CPRO_19200 PF08765 Mor transcription activator family CPRO_19210 PF13443 Cro/C1-type HTH DNA-binding domain CPRO_19220 PF01935 Domain of unknown function DUF87 CPRO_19230 PF00753 Metallo-beta-lactamase superfamily CPRO_19240 PF13302 Acetyltransferase (GNAT) domain CPRO_19250 PF07739 TipAS antibiotic-recognition domain CPRO_19250 PF13411 MerR HTH family regulatory protein CPRO_19280 PF01548 CPRO_19280 CPRO_19280 PF02371 CPRO_19280 CPRO_19290 PF00145 C-5 cytosine-specific DNA methylase CPRO_19300 PF00145 C-5 cytosine-specific DNA methylase CPRO_19350 PF01243 Pyridoxamine 5'-phosphate oxidase CPRO_19360 PF04993 TfoX N-terminal domain CPRO_19370 PF12681 Glyoxalase-like domain CPRO_19380 PF14526 Integron-associated effector binding protein CPRO_19390 PF08279 HTH domain CPRO_19390 PF13280 CPRO_19390 CPRO_19400 PF08279 HTH domain CPRO_19400 PF13280 CPRO_19400 CPRO_19410 PF01965 DJ-1/PfpI family CPRO_19420 PF00005 ABC transporter CPRO_19430 PF00005 ABC transporter CPRO_19440 PF00376 MerR family regulatory protein CPRO_19440 PF13411 MerR HTH family regulatory protein CPRO_19450 PF00005 ABC transporter CPRO_19460 PF01061 CPRO_19460 CPRO_19470 PF12963 CPRO_19470 CPRO_19510 PF14208 CPRO_19510 CPRO_19540 PF00437 Type II/IV secretion system protein CPRO_19550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_19570 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CPRO_19580 PF08666 SAF domain CPRO_19580 PF16976 CPRO_19580 CPRO_19600 PF01478 Type IV leader peptidase family CPRO_19620 PF00395 S-layer homology domain CPRO_19640 PF04026 SpoVG CPRO_19650 PF14191 CPRO_19650 CPRO_19660 PF12960 CPRO_19660 CPRO_19680 PF02086 D12 class N6 adenine-specific DNA methyltransferase CPRO_19690 PF02498 CPRO_19690 CPRO_19690 PF03374 CPRO_19690 CPRO_19700 PF00589 Phage integrase family CPRO_19700 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_19710 PF00589 Phage integrase family CPRO_19720 PF00589 Phage integrase family CPRO_19720 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_19730 PF14192 CPRO_19730 CPRO_19740 PF07275 Antirestriction protein (ArdA) CPRO_19750 PF06908 Protein of unknown function (DUF1273) CPRO_19760 PF13443 Cro/C1-type HTH DNA-binding domain CPRO_19800 PF01541 GIY-YIG catalytic domain CPRO_19830 PF00395 S-layer homology domain CPRO_19840 PF00589 Phage integrase family CPRO_19840 PF13495 Phage integrase, N-terminal SAM-like domain CPRO_19850 PF04986 CPRO_19850 CPRO_19850 PF14319 CPRO_19850 CPRO_19860 PF14101 CPRO_19860 CPRO_19870 PF12728 Helix-turn-helix domain CPRO_19900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CPRO_19900 PF08388 CPRO_19900 CPRO_19920 PF04326 Divergent AAA domain CPRO_19920 PF13749 ATP-dependent DNA helicase recG C-terminal CPRO_19940 PF00395 S-layer homology domain CPRO_19950 PF07833 Copper amine oxidase N-terminal domain CPRO_19970 PF14567 SMI1-KNR4 cell-wall CPRO_20010 PF14501 GHKL domain CPRO_20020 PF00072 Response regulator receiver domain CPRO_20020 PF04397 LytTr DNA-binding domain CPRO_20030 PF04647 CPRO_20030 CPRO_20040 PF01938 TRAM domain CPRO_20040 PF05958 tRNA (Uracil-5-)-methyltransferase CPRO_20070 PF01336 OB-fold nucleic acid binding domain CPRO_20070 PF01966 HD domain CPRO_20080 PF07833 Copper amine oxidase N-terminal domain CPRO_20090 PF12844 Helix-turn-helix domain CPRO_20100 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_20110 PF12844 Helix-turn-helix domain CPRO_20120 PF00543 Nitrogen regulatory protein P-II CPRO_20120 PF00909 Ammonium Transporter Family CPRO_20130 PF04539 Sigma-70 region 3 CPRO_20130 PF04542 Sigma-70 region 2 CPRO_20130 PF04545 Sigma-70, region 4 CPRO_20140 PF00857 Isochorismatase family CPRO_20170 PF03054 tRNA methyl transferase CPRO_20180 PF01895 PhoU domain CPRO_20180 PF02690 CPRO_20180 CPRO_20190 PF00696 Amino acid kinase family CPRO_20200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPRO_20210 PF03435 Saccharopine dehydrogenase CPRO_20210 PF16653 CPRO_20210 CPRO_20220 PF00491 Arginase family CPRO_20230 PF01564 Spermine/spermidine synthase CPRO_20230 PF17284 CPRO_20230 CPRO_20240 PF01276 Orn/Lys/Arg decarboxylase, major domain CPRO_20240 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPRO_20250 PF02675 S-adenosylmethionine decarboxylase CPRO_20260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_20260 PF03466 LysR substrate binding domain CPRO_20270 PF00107 Zinc-binding dehydrogenase CPRO_20270 PF08240 Alcohol dehydrogenase GroES-like domain CPRO_20280 PF00512 His Kinase A (phospho-acceptor) domain CPRO_20280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_20290 PF00072 Response regulator receiver domain CPRO_20290 PF00486 Transcriptional regulatory protein, C terminal CPRO_20310 PF00654 Voltage gated chloride channel CPRO_20320 PF08348 CPRO_20320 CPRO_20320 PF13309 CPRO_20320 CPRO_20330 PF01184 CPRO_20330 CPRO_20340 PF01746 tRNA (Guanine-1)-methyltransferase CPRO_20350 PF01782 RimM N-terminal domain CPRO_20350 PF05239 PRC-barrel domain CPRO_20360 PF13083 KH domain CPRO_20370 PF00886 Ribosomal protein S16 CPRO_20380 PF00448 SRP54-type protein, GTPase domain CPRO_20380 PF02881 SRP54-type protein, helical bundle domain CPRO_20380 PF02978 Signal peptide binding domain CPRO_20390 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CPRO_20400 PF00300 Histidine phosphatase superfamily (branch 1) CPRO_20410 PF07561 CPRO_20410 CPRO_20430 PF02664 S-Ribosylhomocysteinase (LuxS) CPRO_20450 PF00375 Sodium:dicarboxylate symporter family CPRO_20460 PF03313 CPRO_20460 CPRO_20470 PF01842 ACT domain CPRO_20470 PF03315 Serine dehydratase beta chain CPRO_20480 PF00118 TCP-1/cpn60 chaperonin family CPRO_20490 PF00166 Chaperonin 10 Kd subunit CPRO_20500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_20510 PF00009 Elongation factor Tu GTP binding domain CPRO_20510 PF00679 Elongation factor G C-terminus CPRO_20510 PF03764 Elongation factor G, domain IV CPRO_20510 PF14492 Elongation Factor G, domain II CPRO_20520 PF01592 NifU-like N terminal domain CPRO_20530 PF00266 Aminotransferase class-V CPRO_20540 PF01381 Helix-turn-helix CPRO_20550 PF02463 RecF/RecN/SMC N terminal domain CPRO_20560 PF01316 Arginine repressor, DNA binding domain CPRO_20560 PF02863 Arginine repressor, C-terminal domain CPRO_20570 PF01513 ATP-NAD kinase CPRO_20580 PF01479 S4 domain CPRO_20580 PF01728 FtsJ-like methyltransferase CPRO_20590 PF02779 Transketolase, pyrimidine binding domain CPRO_20590 PF02780 Transketolase, C-terminal domain CPRO_20590 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CPRO_20600 PF02681 CPRO_20600 CPRO_20610 PF00348 Polyprenyl synthetase CPRO_20620 PF02609 Exonuclease VII small subunit CPRO_20630 PF02601 CPRO_20630 CPRO_20630 PF13742 CPRO_20630 CPRO_20640 PF01029 NusB family CPRO_20650 PF03780 CPRO_20650 CPRO_20660 PF12685 SpoIIIAH-like protein CPRO_20680 PF09581 CPRO_20680 CPRO_20690 PF09546 CPRO_20690 CPRO_20700 PF06686 CPRO_20700 CPRO_20710 PF06686 CPRO_20710 CPRO_20720 PF09548 CPRO_20720 CPRO_20740 PF04397 LytTr DNA-binding domain CPRO_20750 PF13472 GDSL-like Lipase/Acylhydrolase family CPRO_20760 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_20770 PF00465 Iron-containing alcohol dehydrogenase CPRO_20790 PF00929 Exonuclease CPRO_20800 PF00709 Adenylosuccinate synthetase CPRO_20810 PF03861 ANTAR domain CPRO_20820 PF04199 Putative cyclase CPRO_20830 PF06144 DNA polymerase III, delta subunit CPRO_20840 PF00753 Metallo-beta-lactamase superfamily CPRO_20840 PF03772 CPRO_20840 CPRO_20840 PF13567 CPRO_20840 CPRO_20850 PF10646 CPRO_20850 CPRO_20860 PF00512 His Kinase A (phospho-acceptor) domain CPRO_20860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_20870 PF00072 Response regulator receiver domain CPRO_20870 PF00486 Transcriptional regulatory protein, C terminal CPRO_20880 PF12836 Helix-hairpin-helix motif CPRO_20890 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_20890 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_20900 PF00877 NlpC/P60 family CPRO_20900 PF08239 Bacterial SH3 domain CPRO_20910 PF00005 ABC transporter CPRO_20910 PF00664 ABC transporter transmembrane region CPRO_20920 PF00005 ABC transporter CPRO_20920 PF00664 ABC transporter transmembrane region CPRO_20930 PF12833 Helix-turn-helix domain CPRO_20950 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CPRO_20950 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CPRO_20960 PF00730 HhH-GPD superfamily base excision DNA repair protein CPRO_20960 PF06029 AlkA N-terminal domain CPRO_20970 PF02805 Metal binding domain of Ada CPRO_20970 PF12833 Helix-turn-helix domain CPRO_20980 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CPRO_21000 PF00990 GGDEF domain CPRO_21030 PF06605 Prophage endopeptidase tail CPRO_21040 PF09693 CPRO_21040 CPRO_21060 PF10651 Domain of unknown function (DUF2479) CPRO_21070 PF05709 Phage tail protein CPRO_21170 PF14265 CPRO_21170 CPRO_21180 PF04233 CPRO_21180 CPRO_21190 PF05133 Phage portal protein, SPP1 Gp6-like CPRO_21200 PF04466 Phage terminase large subunit CPRO_21200 PF17288 CPRO_21200 CPRO_21210 PF00239 Resolvase, N terminal domain CPRO_21220 PF13022 Helix-turn-helix of insertion element transposase CPRO_21250 PF13539 D-alanyl-D-alanine carboxypeptidase CPRO_21310 PF02195 ParB-like nuclease domain CPRO_21310 PF11300 CPRO_21310 CPRO_21370 PF00589 Phage integrase family CPRO_21370 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_21380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPRO_21380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPRO_21390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CPRO_21390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CPRO_21410 PF17032 CPRO_21410 CPRO_21420 PF04539 Sigma-70 region 3 CPRO_21420 PF04542 Sigma-70 region 2 CPRO_21420 PF04545 Sigma-70, region 4 CPRO_21430 PF13581 Histidine kinase-like ATPase domain CPRO_21440 PF01740 STAS domain CPRO_21450 PF04542 Sigma-70 region 2 CPRO_21450 PF04545 Sigma-70, region 4 CPRO_21460 PF00239 Resolvase, N terminal domain CPRO_21460 PF07508 Recombinase CPRO_21470 PF00239 Resolvase, N terminal domain CPRO_21470 PF07508 Recombinase CPRO_21480 PF00239 Resolvase, N terminal domain CPRO_21480 PF07508 Recombinase CPRO_21480 PF13408 Recombinase zinc beta ribbon domain CPRO_21510 PF01180 Dihydroorotate dehydrogenase CPRO_21510 PF14697 4Fe-4S dicluster domain CPRO_21520 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_21520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPRO_21530 PF01546 Peptidase family M20/M25/M40 CPRO_21530 PF07687 Peptidase dimerisation domain CPRO_21540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CPRO_21550 PF01979 Amidohydrolase family CPRO_21560 PF06445 GyrI-like small molecule binding domain CPRO_21560 PF13411 MerR HTH family regulatory protein CPRO_21570 PF00881 Nitroreductase family CPRO_21600 PF02515 CoA-transferase family III CPRO_21610 PF00766 Electron transfer flavoprotein FAD-binding domain CPRO_21610 PF01012 Electron transfer flavoprotein domain CPRO_21620 PF01012 Electron transfer flavoprotein domain CPRO_21630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPRO_21630 PF02770 Acyl-CoA dehydrogenase, middle domain CPRO_21630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPRO_21640 PF04612 Type II secretion system (T2SS), protein M CPRO_21660 PF11104 Type IV pilus assembly protein PilM; CPRO_21670 PF01478 Type IV leader peptidase family CPRO_21670 PF06750 CPRO_21670 CPRO_21680 PF07963 Prokaryotic N-terminal methylation motif CPRO_21690 PF00482 Type II secretion system (T2SS), protein F CPRO_21700 PF00437 Type II/IV secretion system protein CPRO_21710 PF00437 Type II/IV secretion system protein CPRO_21710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CPRO_21720 PF07963 Prokaryotic N-terminal methylation motif CPRO_21750 PF07581 CPRO_21750 CPRO_21760 PF07963 Prokaryotic N-terminal methylation motif CPRO_21770 PF01047 MarR family CPRO_21780 PF01136 CPRO_21780 CPRO_21780 PF16325 CPRO_21780 CPRO_21790 PF01596 O-methyltransferase CPRO_21800 PF02618 YceG-like family CPRO_21810 PF02875 Mur ligase family, glutamate ligase domain CPRO_21810 PF08245 Mur ligase middle domain CPRO_21830 PF13174 Tetratricopeptide repeat CPRO_21830 PF13181 Tetratricopeptide repeat CPRO_21840 PF09335 CPRO_21840 CPRO_21850 PF09924 Uncharacterized conserved protein (DUF2156) CPRO_21860 PF13527 Acetyltransferase (GNAT) domain CPRO_21860 PF13530 Sterol carrier protein domain CPRO_21870 PF00293 NUDIX domain CPRO_21880 PF00730 HhH-GPD superfamily base excision DNA repair protein CPRO_21880 PF14815 NUDIX domain CPRO_21890 PF01226 Formate/nitrite transporter CPRO_21900 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_21910 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPRO_21910 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPRO_21920 PF00512 His Kinase A (phospho-acceptor) domain CPRO_21920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_21920 PF13493 Domain of unknown function (DUF4118) CPRO_21930 PF00072 Response regulator receiver domain CPRO_21930 PF00486 Transcriptional regulatory protein, C terminal CPRO_21950 PF04055 Radical SAM superfamily CPRO_21960 PF07883 Cupin domain CPRO_21980 PF05076 Suppressor of fused protein (SUFU) CPRO_21990 PF00448 SRP54-type protein, GTPase domain CPRO_21990 PF02881 SRP54-type protein, helical bundle domain CPRO_22000 PF02463 RecF/RecN/SMC N terminal domain CPRO_22000 PF06470 SMC proteins Flexible Hinge Domain CPRO_22010 PF01979 Amidohydrolase family CPRO_22020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPRO_22020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPRO_22030 PF00849 RNA pseudouridylate synthase CPRO_22030 PF01479 S4 domain CPRO_22040 PF01252 CPRO_22040 CPRO_22050 PF05103 DivIVA protein CPRO_22060 PF01479 S4 domain CPRO_22070 PF02325 CPRO_22070 CPRO_22080 PF04472 Protein of unknown function (DUF552) CPRO_22090 PF01168 Alanine racemase, N-terminal domain CPRO_22110 PF00364 Biotin-requiring enzyme CPRO_22110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_22110 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_22120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPRO_22120 PF00364 Biotin-requiring enzyme CPRO_22120 PF02817 e3 binding domain CPRO_22130 PF01513 ATP-NAD kinase CPRO_22140 PF02779 Transketolase, pyrimidine binding domain CPRO_22140 PF02780 Transketolase, C-terminal domain CPRO_22150 PF00676 Dehydrogenase E1 component CPRO_22160 PF09585 Conserved hypothetical protein (Lin0512_fam) CPRO_22170 PF00158 Sigma-54 interaction domain CPRO_22190 PF09547 CPRO_22190 CPRO_22220 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_22230 PF01381 Helix-turn-helix CPRO_22240 PF02567 Phenazine biosynthesis-like protein CPRO_22250 PF01638 HxlR-like helix-turn-helix CPRO_22260 PF01243 Pyridoxamine 5'-phosphate oxidase CPRO_22280 PF00395 S-layer homology domain CPRO_22290 PF01381 Helix-turn-helix CPRO_22290 PF07883 Cupin domain CPRO_22300 PF01228 Glycine radical CPRO_22300 PF02901 Pyruvate formate lyase CPRO_22310 PF04055 Radical SAM superfamily CPRO_22310 PF13353 4Fe-4S single cluster domain CPRO_22320 PF01966 HD domain CPRO_22330 PF11208 CPRO_22330 CPRO_22360 PF00842 Alanine racemase, C-terminal domain CPRO_22360 PF01168 Alanine racemase, N-terminal domain CPRO_22370 PF01235 CPRO_22370 CPRO_22380 PF01053 Cys/Met metabolism PLP-dependent enzyme CPRO_22390 PF13411 MerR HTH family regulatory protein CPRO_22410 PF04542 Sigma-70 region 2 CPRO_22420 PF05991 CPRO_22420 CPRO_22430 PF00588 SpoU rRNA Methylase family CPRO_22430 PF08032 RNA 2'-O ribose methyltransferase substrate binding CPRO_22440 PF00636 Ribonuclease III domain CPRO_22450 PF01406 tRNA synthetases class I (C) catalytic domain CPRO_22450 PF09190 DALR domain CPRO_22460 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_22470 PF02542 YgbB family CPRO_22480 PF03358 NADPH-dependent FMN reductase CPRO_22600 PF12787 CPRO_22600 CPRO_22610 PF12127 CPRO_22610 CPRO_22620 PF01957 NfeD-like C-terminal, partner-binding CPRO_22630 PF01476 LysM domain CPRO_22640 PF00717 Peptidase S24-like CPRO_22640 PF01726 LexA DNA binding domain CPRO_22650 PF00795 Carbon-nitrogen hydrolase CPRO_22650 PF02540 NAD synthase CPRO_22660 PF00512 His Kinase A (phospho-acceptor) domain CPRO_22660 PF00672 HAMP domain CPRO_22660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_22680 PF00072 Response regulator receiver domain CPRO_22680 PF00486 Transcriptional regulatory protein, C terminal CPRO_22690 PF00488 MutS domain V CPRO_22690 PF01713 Smr domain CPRO_22700 PF06874 CPRO_22700 CPRO_22720 PF13561 Enoyl-(Acyl carrier protein) reductase CPRO_22730 PF13419 Haloacid dehalogenase-like hydrolase CPRO_22740 PF00583 Acetyltransferase (GNAT) family CPRO_22750 PF00814 Glycoprotease family CPRO_22760 PF12706 Beta-lactamase superfamily domain CPRO_22780 PF00830 Ribosomal L28 family CPRO_22790 PF04263 Thiamin pyrophosphokinase, catalytic domain CPRO_22790 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CPRO_22800 PF00834 Ribulose-phosphate 3 epimerase family CPRO_22810 PF03193 Protein of unknown function, DUF258 CPRO_22810 PF16745 CPRO_22810 CPRO_22820 PF00069 Protein kinase domain CPRO_22820 PF03793 PASTA domain CPRO_22830 PF13672 Protein phosphatase 2C CPRO_22840 PF04055 Radical SAM superfamily CPRO_22840 PF13394 4Fe-4S single cluster domain CPRO_22850 PF01029 NusB family CPRO_22850 PF01189 NOL1/NOP2/sun family CPRO_22850 PF17125 CPRO_22850 CPRO_22860 PF04298 CPRO_22860 CPRO_22870 PF00551 Formyl transferase CPRO_22870 PF02911 Formyl transferase, C-terminal domain CPRO_22880 PF01327 Polypeptide deformylase CPRO_22890 PF00270 DEAD/DEAH box helicase CPRO_22890 PF00271 Helicase conserved C-terminal domain CPRO_22910 PF01192 RNA polymerase Rpb6 CPRO_22920 PF00625 Guanylate kinase CPRO_22930 PF04025 CPRO_22930 CPRO_22940 PF03755 CPRO_22940 CPRO_22940 PF08340 CPRO_22940 CPRO_22950 PF05670 CPRO_22950 CPRO_22950 PF05833 Fibronectin-binding protein A N-terminus (FbpA) CPRO_22960 PF01554 MatE CPRO_22970 PF00013 KH domain CPRO_22970 PF01966 HD domain CPRO_22970 PF12072 CPRO_22970 CPRO_22980 PF10150 Ribonuclease E/G family CPRO_23000 PF01551 Peptidase family M23 CPRO_23020 PF03193 Protein of unknown function, DUF258 CPRO_23030 PF04463 CPRO_23030 CPRO_23050 PF12705 PD-(D/E)XK nuclease superfamily CPRO_23050 PF13361 UvrD-like helicase C-terminal domain CPRO_23060 PF00005 ABC transporter CPRO_23060 PF00664 ABC transporter transmembrane region CPRO_23080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CPRO_23120 PF06605 Prophage endopeptidase tail CPRO_23130 PF09693 CPRO_23130 CPRO_23150 PF10651 Domain of unknown function (DUF2479) CPRO_23160 PF05709 Phage tail protein CPRO_23180 PF06854 CPRO_23180 CPRO_23220 PF11114 CPRO_23220 CPRO_23290 PF03237 Terminase-like family CPRO_23300 PF16677 CPRO_23300 CPRO_23330 PF03547 CPRO_23330 CPRO_23340 PF12706 Beta-lactamase superfamily domain CPRO_23350 PF03479 Domain of unknown function (DUF296) CPRO_23360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CPRO_23360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CPRO_23370 PF00364 Biotin-requiring enzyme CPRO_23370 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CPRO_23370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_23380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CPRO_23380 PF00364 Biotin-requiring enzyme CPRO_23380 PF02817 e3 binding domain CPRO_23390 PF02779 Transketolase, pyrimidine binding domain CPRO_23390 PF02780 Transketolase, C-terminal domain CPRO_23400 PF00676 Dehydrogenase E1 component CPRO_23410 PF06808 CPRO_23410 CPRO_23420 PF04290 CPRO_23420 CPRO_23430 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_23440 PF00392 Bacterial regulatory proteins, gntR family CPRO_23440 PF07729 FCD domain CPRO_23460 PF02769 AIR synthase related protein, C-terminal domain CPRO_23460 PF13507 CobB/CobQ-like glutamine amidotransferase domain CPRO_23470 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CPRO_23470 PF02843 Phosphoribosylglycinamide synthetase, C domain CPRO_23470 PF02844 Phosphoribosylglycinamide synthetase, N domain CPRO_23480 PF01808 AICARFT/IMPCHase bienzyme CPRO_23490 PF00206 Lyase CPRO_23490 PF10397 Adenylosuccinate lyase C-terminus CPRO_23500 PF07826 IMP cyclohydrolase-like protein CPRO_23510 PF00551 Formyl transferase CPRO_23520 PF00586 AIR synthase related protein, N-terminal domain CPRO_23520 PF02769 AIR synthase related protein, C-terminal domain CPRO_23530 PF00156 Phosphoribosyl transferase domain CPRO_23530 PF13537 Glutamine amidotransferase domain CPRO_23540 PF01259 SAICAR synthetase CPRO_23550 PF00731 AIR carboxylase CPRO_23560 PF01979 Amidohydrolase family CPRO_23570 PF02142 MGS-like domain CPRO_23570 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CPRO_23570 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CPRO_23580 PF00175 Oxidoreductase NAD-binding domain CPRO_23580 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPRO_23590 PF01180 Dihydroorotate dehydrogenase CPRO_23600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CPRO_23610 PF00156 Phosphoribosyl transferase domain CPRO_23620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CPRO_23620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CPRO_23630 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CPRO_23630 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CPRO_23640 PF06821 Serine hydrolase CPRO_23660 PF09719 Putative redox-active protein (C_GCAxxG_C_C) CPRO_23670 PF04246 CPRO_23670 CPRO_23680 PF01594 CPRO_23680 CPRO_23690 PF01546 Peptidase family M20/M25/M40 CPRO_23690 PF07687 Peptidase dimerisation domain CPRO_23700 PF00035 Double-stranded RNA binding motif CPRO_23700 PF14622 Ribonuclease-III-like CPRO_23710 PF00550 Phosphopantetheine attachment site CPRO_23740 PF01627 Hpt domain CPRO_23740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_23750 PF01515 Phosphate acetyl/butaryl transferase CPRO_23760 PF00871 Acetokinase family CPRO_23770 PF02620 CPRO_23770 CPRO_23780 PF01783 Ribosomal L32p protein family CPRO_23790 PF02504 Fatty acid synthesis protein CPRO_23800 PF05636 HIGH Nucleotidyl Transferase CPRO_23810 PF07670 Nucleoside recognition CPRO_23830 PF01467 Cytidylyltransferase CPRO_23840 PF03602 Conserved hypothetical protein 95 CPRO_23850 PF00224 Pyruvate kinase, barrel domain CPRO_23850 PF00391 PEP-utilising enzyme, mobile domain CPRO_23850 PF02887 Pyruvate kinase, alpha/beta domain CPRO_23860 PF00365 Phosphofructokinase CPRO_23870 PF02081 Tryptophan RNA-binding attenuator protein CPRO_23880 PF01336 OB-fold nucleic acid binding domain CPRO_23880 PF02811 PHP domain CPRO_23880 PF07733 Bacterial DNA polymerase III alpha subunit CPRO_23880 PF14579 Helix-hairpin-helix motif CPRO_23890 PF02687 CPRO_23890 CPRO_23890 PF12704 MacB-like periplasmic core domain CPRO_23900 PF00005 ABC transporter CPRO_23910 PF00529 HlyD family secretion protein CPRO_23910 PF16576 CPRO_23910 CPRO_23920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_23920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_23920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_23920 PF10371 Domain of unknown function CPRO_23920 PF12838 4Fe-4S dicluster domain CPRO_23920 PF17147 CPRO_23920 CPRO_23930 PF07833 Copper amine oxidase N-terminal domain CPRO_23940 PF01668 SmpB protein CPRO_23960 PF09346 SMI1 / KNR4 family (SUKH-1) CPRO_23980 PF01935 Domain of unknown function DUF87 CPRO_23990 PF13289 CPRO_23990 CPRO_24000 PF00589 Phage integrase family CPRO_24020 PF12102 Domain of unknown function (DUF3578) CPRO_24020 PF13020 CPRO_24020 CPRO_24030 PF02086 D12 class N6 adenine-specific DNA methyltransferase CPRO_24040 PF13529 Peptidase_C39 like family CPRO_24080 PF06605 Prophage endopeptidase tail CPRO_24090 PF09693 CPRO_24090 CPRO_24110 PF10651 Domain of unknown function (DUF2479) CPRO_24120 PF05709 Phage tail protein CPRO_24130 PF10145 CPRO_24130 CPRO_24220 PF05065 Phage capsid family CPRO_24230 PF00574 Clp protease CPRO_24240 PF04860 Phage portal protein CPRO_24250 PF03354 CPRO_24250 CPRO_24260 PF05119 CPRO_24260 CPRO_24270 PF01844 HNH endonuclease CPRO_24320 PF03838 Recombination protein U CPRO_24330 PF01507 Phosphoadenosine phosphosulfate reductase family CPRO_24390 PF02229 Transcriptional Coactivator p15 (PC4) CPRO_24400 PF04014 Antidote-toxin recognition MazE CPRO_24460 PF01381 Helix-turn-helix CPRO_24480 PF06114 Domain of unknown function (DUF955) CPRO_24510 PF00589 Phage integrase family CPRO_24520 PF00301 Rubredoxin CPRO_24530 PF14512 Putative TM nitroreductase CPRO_24540 PF00753 Metallo-beta-lactamase superfamily CPRO_24590 PF04055 Radical SAM superfamily CPRO_24590 PF13186 Iron-sulfur cluster-binding domain CPRO_24620 PF00313 'Cold-shock' DNA-binding domain CPRO_24630 PF00270 DEAD/DEAH box helicase CPRO_24630 PF00271 Helicase conserved C-terminal domain CPRO_24640 PF17191 CPRO_24640 CPRO_24660 PF02734 DAK2 domain CPRO_24660 PF13684 Dihydroxyacetone kinase family CPRO_24670 PF03780 CPRO_24670 CPRO_24680 PF06808 CPRO_24680 CPRO_24690 PF04290 CPRO_24690 CPRO_24700 PF03480 Bacterial extracellular solute-binding protein, family 7 CPRO_24710 PF13561 Enoyl-(Acyl carrier protein) reductase CPRO_24720 PF01797 Transposase IS200 like CPRO_24880 PF01546 Peptidase family M20/M25/M40 CPRO_24880 PF07687 Peptidase dimerisation domain CPRO_24890 PF00579 tRNA synthetases class I (W and Y) CPRO_24890 PF01479 S4 domain CPRO_24900 PF01965 DJ-1/PfpI family CPRO_24910 PF00589 Phage integrase family CPRO_24910 PF02899 Phage integrase, N-terminal SAM-like domain CPRO_24920 PF01944 CPRO_24920 CPRO_24930 PF00293 NUDIX domain CPRO_24940 PF00155 Aminotransferase class I and II CPRO_24950 PF01244 Membrane dipeptidase (Peptidase family M19) CPRO_24960 PF00072 Response regulator receiver domain CPRO_24960 PF08769 Sporulation initiation factor Spo0A C terminal CPRO_24970 PF05580 CPRO_24970 CPRO_24980 PF00392 Bacterial regulatory proteins, gntR family CPRO_24980 PF07729 FCD domain CPRO_25010 PF00113 Enolase, C-terminal TIM barrel domain CPRO_25010 PF03952 Enolase, N-terminal domain CPRO_25020 PF01676 Metalloenzyme superfamily CPRO_25020 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CPRO_25030 PF00121 Triosephosphate isomerase CPRO_25040 PF01522 Polysaccharide deacetylase CPRO_25050 PF00162 Phosphoglycerate kinase CPRO_25060 PF04198 Putative sugar-binding domain CPRO_25080 PF00293 NUDIX domain CPRO_25090 PF13367 CPRO_25090 CPRO_25100 PF02687 CPRO_25100 CPRO_25100 PF12704 MacB-like periplasmic core domain CPRO_25110 PF07705 CARDB CPRO_25120 PF00005 ABC transporter CPRO_25140 PF01926 50S ribosome-binding GTPase CPRO_25140 PF13167 CPRO_25140 CPRO_25140 PF16360 CPRO_25140 CPRO_25150 PF01678 Diaminopimelate epimerase CPRO_25160 PF04070 CPRO_25160 CPRO_25170 PF00675 Insulinase (Peptidase family M16) CPRO_25170 PF05193 Peptidase M16 inactive domain CPRO_25180 PF00013 KH domain CPRO_25180 PF00575 S1 RNA binding domain CPRO_25180 PF01138 3' exoribonuclease family, domain 1 CPRO_25180 PF03725 3' exoribonuclease family, domain 2 CPRO_25180 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CPRO_25190 PF00312 Ribosomal protein S15 CPRO_25200 PF00892 EamA-like transporter family CPRO_25210 PF01687 Riboflavin kinase CPRO_25210 PF06574 FAD synthetase CPRO_25220 PF01509 TruB family pseudouridylate synthase (N terminal domain) CPRO_25220 PF16198 CPRO_25220 CPRO_25230 PF01368 DHH family CPRO_25230 PF02272 DHHA1 domain CPRO_25240 PF02033 Ribosome-binding factor A CPRO_25250 PF00009 Elongation factor Tu GTP binding domain CPRO_25250 PF04760 Translation initiation factor IF-2, N-terminal region CPRO_25250 PF11987 Translation-initiation factor 2 CPRO_25260 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CPRO_25270 PF04296 Protein of unknown function (DUF448) CPRO_25280 PF00575 S1 RNA binding domain CPRO_25280 PF08529 NusA N-terminal domain CPRO_25280 PF13184 NusA-like KH domain CPRO_25290 PF02576 Uncharacterised BCR, YhbC family COG0779 CPRO_25290 PF17384 CPRO_25290 CPRO_25300 PF04474 CPRO_25300 CPRO_25310 PF00005 ABC transporter CPRO_25320 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_25330 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_25340 PF01791 DeoC/LacD family aldolase CPRO_25350 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_25380 PF00575 S1 RNA binding domain CPRO_25380 PF02401 LytB protein CPRO_25390 PF01553 Acyltransferase CPRO_25400 PF02224 Cytidylate kinase CPRO_25410 PF03486 HI0933-like protein CPRO_25420 PF00300 Histidine phosphatase superfamily (branch 1) CPRO_25430 PF00849 RNA pseudouridylate synthase CPRO_25430 PF01479 S4 domain CPRO_25440 PF00768 D-alanyl-D-alanine carboxypeptidase CPRO_25440 PF07943 Penicillin-binding protein 5, C-terminal domain CPRO_25460 PF04079 Putative transcriptional regulators (Ypuh-like) CPRO_25470 PF02616 ScpA/B protein CPRO_25490 PF01381 Helix-turn-helix CPRO_25510 PF02558 Ketopantoate reductase PanE/ApbA CPRO_25510 PF08546 Ketopantoate reductase PanE/ApbA C terminal CPRO_25530 PF00171 Aldehyde dehydrogenase family CPRO_25540 PF01812 5-formyltetrahydrofolate cyclo-ligase family CPRO_25550 PF09858 CPRO_25550 CPRO_25570 PF00696 Amino acid kinase family CPRO_25580 PF00749 tRNA synthetases class I (E and Q), catalytic domain CPRO_25580 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CPRO_25600 PF00183 Hsp90 protein CPRO_25600 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_25620 PF02554 CPRO_25620 CPRO_25620 PF13722 CPRO_25620 CPRO_25630 PF03372 Endonuclease/Exonuclease/phosphatase family CPRO_25650 PF00795 Carbon-nitrogen hydrolase CPRO_25660 PF01451 Low molecular weight phosphotyrosine protein phosphatase CPRO_25670 PF00290 Tryptophan synthase alpha chain CPRO_25680 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_25690 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CPRO_25700 PF00218 Indole-3-glycerol phosphate synthase CPRO_25710 PF00591 Glycosyl transferase family, a/b domain CPRO_25710 PF02885 Glycosyl transferase family, helical bundle domain CPRO_25720 PF00117 Glutamine amidotransferase class-I CPRO_25730 PF00425 chorismate binding enzyme CPRO_25730 PF04715 Anthranilate synthase component I, N terminal region CPRO_25740 PF02567 Phenazine biosynthesis-like protein CPRO_25750 PF00155 Aminotransferase class I and II CPRO_25750 PF00392 Bacterial regulatory proteins, gntR family CPRO_25760 PF01545 Cation efflux family CPRO_25760 PF16916 CPRO_25760 CPRO_25770 PF00226 DnaJ domain CPRO_25770 PF00684 DnaJ central domain CPRO_25770 PF01556 DnaJ C terminal domain CPRO_25780 PF00012 Hsp70 protein CPRO_25790 PF01025 GrpE CPRO_25800 PF01628 HrcA protein C terminal domain CPRO_25800 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CPRO_25810 PF04055 Radical SAM superfamily CPRO_25810 PF06969 HemN C-terminal domain CPRO_25820 PF00884 Sulfatase CPRO_25840 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_25860 PF01381 Helix-turn-helix CPRO_25880 PF01906 Putative heavy-metal-binding CPRO_25890 PF03733 CPRO_25890 CPRO_25900 PF09929 CPRO_25900 CPRO_25910 PF00557 Metallopeptidase family M24 CPRO_25910 PF05195 Aminopeptidase P, N-terminal domain CPRO_25920 PF01411 tRNA synthetases class II (A) CPRO_25920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CPRO_25930 PF02645 Uncharacterised protein, DegV family COG1307 CPRO_25950 PF01926 50S ribosome-binding GTPase CPRO_25960 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_25960 PF02190 ATP-dependent protease La (LON) domain CPRO_25960 PF05362 Lon protease (S16) C-terminal proteolytic domain CPRO_25970 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_25970 PF05362 Lon protease (S16) C-terminal proteolytic domain CPRO_25980 PF00009 Elongation factor Tu GTP binding domain CPRO_25980 PF03143 Elongation factor Tu C-terminal domain CPRO_25980 PF03144 Elongation factor Tu domain 2 CPRO_25990 PF00009 Elongation factor Tu GTP binding domain CPRO_25990 PF00679 Elongation factor G C-terminus CPRO_25990 PF03144 Elongation factor Tu domain 2 CPRO_25990 PF03764 Elongation factor G, domain IV CPRO_25990 PF14492 Elongation Factor G, domain II CPRO_26000 PF00177 Ribosomal protein S7p/S5e CPRO_26010 PF00164 Ribosomal protein S12/S23 CPRO_26020 PF00005 ABC transporter CPRO_26030 PF02687 CPRO_26030 CPRO_26040 PF00440 Bacterial regulatory proteins, tetR family CPRO_26050 PF00623 RNA polymerase Rpb1, domain 2 CPRO_26050 PF04983 RNA polymerase Rpb1, domain 3 CPRO_26050 PF04997 RNA polymerase Rpb1, domain 1 CPRO_26050 PF04998 RNA polymerase Rpb1, domain 5 CPRO_26050 PF05000 RNA polymerase Rpb1, domain 4 CPRO_26060 PF00562 RNA polymerase Rpb2, domain 6 CPRO_26060 PF04560 RNA polymerase Rpb2, domain 7 CPRO_26060 PF04561 RNA polymerase Rpb2, domain 2 CPRO_26060 PF04563 RNA polymerase beta subunit CPRO_26060 PF04565 RNA polymerase Rpb2, domain 3 CPRO_26060 PF10385 RNA polymerase beta subunit external 1 domain CPRO_26070 PF02677 CPRO_26070 CPRO_26080 PF00892 EamA-like transporter family CPRO_26090 PF00542 Ribosomal protein L7/L12 C-terminal domain CPRO_26090 PF16320 CPRO_26090 CPRO_26100 PF00466 Ribosomal protein L10 CPRO_26110 PF00687 Ribosomal protein L1p/L10e family CPRO_26120 PF00298 Ribosomal protein L11, RNA binding domain CPRO_26120 PF03946 Ribosomal protein L11, N-terminal domain CPRO_26130 PF00467 KOW motif CPRO_26130 PF02357 Transcription termination factor nusG CPRO_26140 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CPRO_26150 PF12637 CPRO_26150 CPRO_26160 PF13187 4Fe-4S dicluster domain CPRO_26170 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CPRO_26170 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CPRO_26180 PF06723 MreB/Mbl protein CPRO_26190 PF03572 Peptidase family S41 CPRO_26190 PF13180 PDZ domain CPRO_26200 PF02687 CPRO_26200 CPRO_26210 PF00005 ABC transporter CPRO_26220 PF13556 PucR C-terminal helix-turn-helix domain CPRO_26230 PF02588 CPRO_26230 CPRO_26230 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CPRO_26240 PF03808 CPRO_26240 CPRO_26250 PF04230 CPRO_26250 CPRO_26250 PF13439 Glycosyltransferase Family 4 CPRO_26250 PF13692 Glycosyl transferases group 1 CPRO_26260 PF14221 CPRO_26260 CPRO_26270 PF14221 CPRO_26270 CPRO_26280 PF00534 Glycosyl transferases group 1 CPRO_26280 PF13439 Glycosyltransferase Family 4 CPRO_26290 PF03023 CPRO_26290 CPRO_26290 PF04932 CPRO_26290 CPRO_26300 PF09992 Predicted periplasmic protein (DUF2233) CPRO_26310 PF03548 Outer membrane lipoprotein carrier protein LolA CPRO_26340 PF00485 Phosphoribulokinase / Uridine kinase family CPRO_26350 PF03816 Cell envelope-related transcriptional attenuator domain CPRO_26350 PF13399 LytR cell envelope-related transcriptional attenuator CPRO_26360 PF03816 Cell envelope-related transcriptional attenuator domain CPRO_26370 PF00884 Sulfatase CPRO_26380 PF00209 Sodium:neurotransmitter symporter family CPRO_26390 PF00571 CBS domain CPRO_26390 PF01769 Divalent cation transporter CPRO_26390 PF03448 MgtE intracellular N domain CPRO_26410 PF00772 DnaB-like helicase N terminal domain CPRO_26410 PF03796 DnaB-like helicase C terminal domain CPRO_26420 PF01281 Ribosomal protein L9, N-terminal domain CPRO_26420 PF03948 Ribosomal protein L9, C-terminal domain CPRO_26430 PF01368 DHH family CPRO_26430 PF02272 DHHA1 domain CPRO_26450 PF12643 CPRO_26450 CPRO_26460 PF01882 CPRO_26460 CPRO_26470 PF07726 ATPase family associated with various cellular activities (AAA) CPRO_26480 PF01594 CPRO_26480 CPRO_26490 PF02517 CAAX protease self-immunity CPRO_26500 PF07866 Protein of unknown function (DUF1653) CPRO_26510 PF04014 Antidote-toxin recognition MazE CPRO_26510 PF15714 CPRO_26510 CPRO_26520 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CPRO_26520 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CPRO_26530 PF02660 CPRO_26530 CPRO_26540 PF01926 50S ribosome-binding GTPase CPRO_26540 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CPRO_26550 PF02578 Multi-copper polyphenol oxidoreductase laccase CPRO_26560 PF01351 Ribonuclease HII CPRO_26560 PF02021 Uncharacterised protein family UPF0102 CPRO_26570 PF07784 CPRO_26570 CPRO_26580 PF00753 Metallo-beta-lactamase superfamily CPRO_26580 PF07521 RNA-metabolising metallo-beta-lactamase CPRO_26590 PF06949 CPRO_26590 CPRO_26600 PF03652 Uncharacterised protein family (UPF0081) CPRO_26610 PF06135 CPRO_26610 CPRO_26620 PF00919 Uncharacterized protein family UPF0004 CPRO_26620 PF04055 Radical SAM superfamily CPRO_26630 PF08282 haloacid dehalogenase-like hydrolase CPRO_26660 PF01048 Phosphorylase superfamily CPRO_26670 PF07722 Peptidase C26 CPRO_26680 PF00924 Mechanosensitive ion channel CPRO_26690 PF06107 CPRO_26690 CPRO_26700 PF02698 DUF218 domain CPRO_26730 PF00122 E1-E2 ATPase CPRO_26730 PF00403 Heavy-metal-associated domain CPRO_26730 PF00702 haloacid dehalogenase-like hydrolase CPRO_26740 PF01022 Bacterial regulatory protein, arsR family CPRO_26750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_26750 PF03466 LysR substrate binding domain CPRO_26760 PF00037 4Fe-4S binding domain CPRO_26770 PF13145 PPIC-type PPIASE domain CPRO_26780 PF00270 DEAD/DEAH box helicase CPRO_26780 PF00271 Helicase conserved C-terminal domain CPRO_26780 PF02559 CarD-like/TRCF domain CPRO_26780 PF03461 TRCF domain CPRO_26790 PF01195 Peptidyl-tRNA hydrolase CPRO_26800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPRO_26800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPRO_26820 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CPRO_26820 PF14572 Phosphoribosyl synthetase-associated domain CPRO_26830 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_26830 PF12804 MobA-like NTP transferase domain CPRO_26840 PF00483 Nucleotidyl transferase CPRO_26850 PF00483 Nucleotidyl transferase CPRO_26860 PF01225 Mur ligase family, catalytic domain CPRO_26860 PF02875 Mur ligase family, glutamate ligase domain CPRO_26860 PF08245 Mur ligase middle domain CPRO_26870 PF02590 Predicted SPOUT methyltransferase CPRO_26880 PF12706 Beta-lactamase superfamily domain CPRO_26890 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_26900 PF09648 YycH protein CPRO_26930 PF00512 His Kinase A (phospho-acceptor) domain CPRO_26930 PF00672 HAMP domain CPRO_26930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_26940 PF00072 Response regulator receiver domain CPRO_26940 PF00486 Transcriptional regulatory protein, C terminal CPRO_26950 PF00072 Response regulator receiver domain CPRO_26950 PF00512 His Kinase A (phospho-acceptor) domain CPRO_26950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_26950 PF08447 PAS fold CPRO_26960 PF01869 BadF/BadG/BcrA/BcrD ATPase family CPRO_26960 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CPRO_26960 PF09989 CPRO_26960 CPRO_26980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CPRO_26990 PF13847 Methyltransferase domain CPRO_27000 PF04468 CPRO_27000 CPRO_27010 PF13177 DNA polymerase III, delta subunit CPRO_27020 PF06153 Protein of unknown function (DUF970) CPRO_27030 PF02223 Thymidylate kinase CPRO_27040 PF01695 IstB-like ATP binding protein CPRO_27050 PF07261 Replication initiation and membrane attachment CPRO_27060 PF00953 Glycosyl transferase family 4 CPRO_27070 PF14681 Uracil phosphoribosyltransferase CPRO_27080 PF02502 Ribose/Galactose Isomerase CPRO_27090 PF01300 Telomere recombination CPRO_27090 PF03481 Putative GTP-binding controlling metal-binding CPRO_27100 PF02810 SEC-C motif CPRO_27120 PF00117 Glutamine amidotransferase class-I CPRO_27120 PF06418 CTP synthase N-terminus CPRO_27140 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CPRO_27150 PF03033 Glycosyltransferase family 28 N-terminal domain CPRO_27150 PF04101 Glycosyltransferase family 28 C-terminal domain CPRO_27170 PF01230 HIT domain CPRO_27180 PF07947 CPRO_27180 CPRO_27210 PF13091 PLD-like domain CPRO_27210 PF13396 CPRO_27210 CPRO_27230 PF03073 TspO/MBR family CPRO_27240 PF00962 Adenosine/AMP deaminase CPRO_27250 PF08903 Domain of unknown function (DUF1846) CPRO_27260 PF00156 Phosphoribosyl transferase domain CPRO_27270 PF13538 UvrD-like helicase C-terminal domain CPRO_27270 PF13604 AAA domain CPRO_27270 PF14490 Helix-hairpin-helix containing domain CPRO_27270 PF14520 Helix-hairpin-helix domain CPRO_27280 PF00438 S-adenosylmethionine synthetase, N-terminal domain CPRO_27280 PF02772 S-adenosylmethionine synthetase, central domain CPRO_27280 PF02773 S-adenosylmethionine synthetase, C-terminal domain CPRO_27290 PF03167 Uracil DNA glycosylase superfamily CPRO_27300 PF08713 DNA alkylation repair enzyme CPRO_27310 PF01325 Iron dependent repressor, N-terminal DNA binding domain CPRO_27310 PF02742 Iron dependent repressor, metal binding and dimerisation domain CPRO_27320 PF04023 FeoA domain CPRO_27330 PF00563 EAL domain CPRO_27330 PF00990 GGDEF domain CPRO_27340 PF00881 Nitroreductase family CPRO_27350 PF02678 Pirin CPRO_27350 PF05726 Pirin C-terminal cupin domain CPRO_27360 PF01047 MarR family CPRO_27370 PF01522 Polysaccharide deacetylase CPRO_27370 PF11738 Protein of unknown function (DUF3298) CPRO_27390 PF00037 4Fe-4S binding domain CPRO_27410 PF12900 Pyridoxamine 5'-phosphate oxidase CPRO_27420 PF00860 Permease family CPRO_27430 PF01207 Dihydrouridine synthase (Dus) CPRO_27440 PF03309 Type III pantothenate kinase CPRO_27450 PF03309 Type III pantothenate kinase CPRO_27460 PF12822 Protein of unknown function (DUF3816) CPRO_27480 PF03099 Biotin/lipoate A/B protein ligase family CPRO_27480 PF08279 HTH domain CPRO_27500 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_27500 PF01434 Peptidase family M41 CPRO_27510 PF00156 Phosphoribosyl transferase domain CPRO_27520 PF01171 PP-loop family CPRO_27520 PF11734 TilS substrate C-terminal domain CPRO_27530 PF07228 Stage II sporulation protein E (SpoIIE) CPRO_27540 PF00395 S-layer homology domain CPRO_27550 PF01546 Peptidase family M20/M25/M40 CPRO_27550 PF07687 Peptidase dimerisation domain CPRO_27560 PF00753 Metallo-beta-lactamase superfamily CPRO_27570 PF00342 Phosphoglucose isomerase CPRO_27580 PF01476 LysM domain CPRO_27580 PF07501 G5 domain CPRO_27590 PF00392 Bacterial regulatory proteins, gntR family CPRO_27590 PF07729 FCD domain CPRO_27600 PF00288 GHMP kinases N terminal domain CPRO_27600 PF08544 GHMP kinases C terminal CPRO_27610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CPRO_27610 PF01872 RibD C-terminal domain CPRO_27620 PF00677 Lumazine binding domain CPRO_27630 PF00925 GTP cyclohydrolase II CPRO_27630 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CPRO_27640 PF00885 6,7-dimethyl-8-ribityllumazine synthase CPRO_27650 PF01594 CPRO_27650 CPRO_27660 PF05857 CPRO_27660 CPRO_27670 PF00291 Pyridoxal-phosphate dependent enzyme CPRO_27680 PF00557 Metallopeptidase family M24 CPRO_27680 PF02810 SEC-C motif CPRO_27690 PF12832 MFS_1 like family CPRO_27700 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CPRO_27700 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CPRO_27710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CPRO_27740 PF06605 Prophage endopeptidase tail CPRO_27750 PF09693 CPRO_27750 CPRO_27770 PF10651 Domain of unknown function (DUF2479) CPRO_27780 PF05709 Phage tail protein CPRO_27790 PF10145 CPRO_27790 CPRO_27870 PF14265 CPRO_27870 CPRO_27880 PF04233 CPRO_27880 CPRO_27890 PF05133 Phage portal protein, SPP1 Gp6-like CPRO_27900 PF04466 Phage terminase large subunit CPRO_27900 PF17288 CPRO_27900 CPRO_27910 PF13022 Helix-turn-helix of insertion element transposase CPRO_27930 PF13539 D-alanyl-D-alanine carboxypeptidase CPRO_27990 PF02195 ParB-like nuclease domain CPRO_27990 PF11300 CPRO_27990 CPRO_28040 PF03869 Arc-like DNA binding domain CPRO_28060 PF00589 Phage integrase family CPRO_28060 PF13102 Phage integrase SAM-like domain CPRO_28080 PF03956 CPRO_28080 CPRO_28090 PF03956 CPRO_28090 CPRO_28100 PF01212 Beta-eliminating lyase CPRO_28110 PF00005 ABC transporter CPRO_28110 PF12848 ABC transporter CPRO_28130 PF00899 ThiF family CPRO_28140 PF06081 CPRO_28140 CPRO_28140 PF08282 haloacid dehalogenase-like hydrolase CPRO_28150 PF00465 Iron-containing alcohol dehydrogenase CPRO_28160 PF00766 Electron transfer flavoprotein FAD-binding domain CPRO_28160 PF01012 Electron transfer flavoprotein domain CPRO_28170 PF01012 Electron transfer flavoprotein domain CPRO_28180 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CPRO_28180 PF02770 Acyl-CoA dehydrogenase, middle domain CPRO_28180 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CPRO_28190 PF00158 Sigma-54 interaction domain CPRO_28190 PF08448 PAS fold CPRO_28200 PF00753 Metallo-beta-lactamase superfamily CPRO_28200 PF07833 Copper amine oxidase N-terminal domain CPRO_28210 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_28210 PF01434 Peptidase family M41 CPRO_28210 PF06480 FtsH Extracellular CPRO_28220 PF12802 MarR family CPRO_28230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CPRO_28250 PF01741 Large-conductance mechanosensitive channel, MscL CPRO_28260 PF00005 ABC transporter CPRO_28270 PF13529 Peptidase_C39 like family CPRO_28290 PF02561 Flagellar protein FliS CPRO_28300 PF02465 CPRO_28300 CPRO_28300 PF07195 CPRO_28300 CPRO_28310 PF13614 AAA domain CPRO_28320 PF10719 CPRO_28320 CPRO_28330 PF00072 Response regulator receiver domain CPRO_28330 PF01584 CheW-like domain CPRO_28340 PF03975 CheD chemotactic sensory transduction CPRO_28350 PF04509 CheC-like family CPRO_28360 PF00460 Flagella basal body rod protein CPRO_28360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_28370 PF00460 Flagella basal body rod protein CPRO_28370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_28380 PF04539 Sigma-70 region 3 CPRO_28380 PF04542 Sigma-70 region 2 CPRO_28380 PF04545 Sigma-70, region 4 CPRO_28390 PF00771 FHIPEP family CPRO_28400 PF01312 FlhB HrpN YscU SpaS Family CPRO_28410 PF01311 CPRO_28410 CPRO_28420 PF01313 CPRO_28420 CPRO_28430 PF00813 CPRO_28430 CPRO_28440 PF04347 CPRO_28440 CPRO_28450 PF00072 Response regulator receiver domain CPRO_28460 PF01052 Surface presentation of antigens (SPOA) CPRO_28460 PF04509 CheC-like family CPRO_28470 PF01052 Surface presentation of antigens (SPOA) CPRO_28470 PF02154 Flagellar motor switch protein FliM CPRO_28480 PF00691 OmpA family CPRO_28480 PF13677 CPRO_28480 CPRO_28490 PF01618 CPRO_28490 CPRO_28500 PF06289 CPRO_28500 CPRO_28510 PF00460 Flagella basal body rod protein CPRO_28510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_28520 PF03963 CPRO_28520 CPRO_28530 PF02120 Flagellar hook-length control protein FliK CPRO_28550 PF00395 S-layer homology domain CPRO_28560 PF07238 PilZ domain CPRO_28570 PF01312 FlhB HrpN YscU SpaS Family CPRO_28590 PF01584 CheW-like domain CPRO_28590 PF01627 Hpt domain CPRO_28590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_28590 PF02895 Signal transducing histidine kinase, homodimeric domain CPRO_28590 PF07194 P2 response regulator binding domain CPRO_28600 PF01584 CheW-like domain CPRO_28610 PF01739 CheR methyltransferase, SAM binding domain CPRO_28610 PF03705 CheR methyltransferase, all-alpha domain CPRO_28620 PF00072 Response regulator receiver domain CPRO_28620 PF01339 CheB methylesterase CPRO_28630 PF04316 Anti-sigma-28 factor, FlgM CPRO_28640 PF05130 FlgN protein CPRO_28650 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CPRO_28660 PF00669 Bacterial flagellin N-terminal helical region CPRO_28680 PF02623 FliW protein CPRO_28690 PF02599 Global regulator protein family CPRO_28710 PF00005 ABC transporter CPRO_28720 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_28730 PF00497 Bacterial extracellular solute-binding proteins, family 3 CPRO_28740 PF01476 LysM domain CPRO_28740 PF12673 CPRO_28740 CPRO_28750 PF00717 Peptidase S24-like CPRO_28860 PF00343 Carbohydrate phosphorylase CPRO_28880 PF02417 CPRO_28880 CPRO_28890 PF02417 CPRO_28890 CPRO_28900 PF00472 RF-1 domain CPRO_28900 PF03462 PCRF domain CPRO_28910 PF05175 Methyltransferase small domain CPRO_28920 PF07136 CPRO_28920 CPRO_28930 PF01197 Ribosomal protein L31 CPRO_28940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CPRO_28940 PF07497 Rho termination factor, RNA-binding domain CPRO_28940 PF07498 Rho termination factor, N-terminal domain CPRO_28950 PF01476 LysM domain CPRO_28970 PF05389 Negative regulator of genetic competence (MecA) CPRO_28980 PF09365 CPRO_28980 CPRO_28990 PF03030 Inorganic H+ pyrophosphatase CPRO_29000 PF03547 CPRO_29000 CPRO_29010 PF01569 PAP2 superfamily CPRO_29020 PF02659 CPRO_29020 CPRO_29030 PF07155 ECF-type riboflavin transporter, S component CPRO_29070 PF09578 CPRO_29070 CPRO_29080 PF07873 YabP family CPRO_29090 PF01479 S4 domain CPRO_29100 PF00216 Bacterial DNA-binding protein CPRO_29110 PF03819 MazG nucleotide pyrophosphohydrolase domain CPRO_29120 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CPRO_29130 PF07992 Pyridine nucleotide-disulphide oxidoreductase CPRO_29130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CPRO_29140 PF00753 Metallo-beta-lactamase superfamily CPRO_29150 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CPRO_29150 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CPRO_29160 PF03477 ATP cone domain CPRO_29160 PF13597 Anaerobic ribonucleoside-triphosphate reductase CPRO_29170 PF13353 4Fe-4S single cluster domain CPRO_29180 PF00692 dUTPase CPRO_29190 PF04294 CPRO_29190 CPRO_29200 PF03180 NLPA lipoprotein CPRO_29210 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_29220 PF00005 ABC transporter CPRO_29220 PF09383 NIL domain CPRO_29240 PF03816 Cell envelope-related transcriptional attenuator domain CPRO_29260 PF08543 Phosphomethylpyrimidine kinase CPRO_29270 PF09512 CPRO_29270 CPRO_29290 PF06949 CPRO_29290 CPRO_29300 PF00270 DEAD/DEAH box helicase CPRO_29300 PF00271 Helicase conserved C-terminal domain CPRO_29310 PF01520 N-acetylmuramoyl-L-alanine amidase CPRO_29320 PF00266 Aminotransferase class-V CPRO_29330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CPRO_29330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CPRO_29340 PF06245 CPRO_29340 CPRO_29360 PF02350 UDP-N-acetylglucosamine 2-epimerase CPRO_29370 PF01557 Fumarylacetoacetate (FAA) hydrolase family CPRO_29380 PF00764 Arginosuccinate synthase CPRO_29390 PF00206 Lyase CPRO_29390 PF14698 Argininosuccinate lyase C-terminal CPRO_29400 PF12441 CPRO_29400 CPRO_29430 PF13419 Haloacid dehalogenase-like hydrolase CPRO_29440 PF07454 CPRO_29440 CPRO_29450 PF00155 Aminotransferase class I and II CPRO_29460 PF00155 Aminotransferase class I and II CPRO_29470 PF01381 Helix-turn-helix CPRO_29470 PF07883 Cupin domain CPRO_29480 PF00005 ABC transporter CPRO_29480 PF08402 TOBE domain CPRO_29490 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_29500 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_29510 PF13416 Bacterial extracellular solute-binding protein CPRO_29530 PF13306 Leucine rich repeats (6 copies) CPRO_29540 PF09967 CPRO_29540 CPRO_29540 PF13203 CPRO_29540 CPRO_29550 PF00004 ATPase family associated with various cellular activities (AAA) CPRO_29560 PF13420 Acetyltransferase (GNAT) domain CPRO_29570 PF01925 CPRO_29570 CPRO_29580 PF01276 Orn/Lys/Arg decarboxylase, major domain CPRO_29580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CPRO_29590 PF04055 Radical SAM superfamily CPRO_29590 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CPRO_29590 PF13353 4Fe-4S single cluster domain CPRO_29600 PF00392 Bacterial regulatory proteins, gntR family CPRO_29600 PF02080 TrkA-C domain CPRO_29610 PF00005 ABC transporter CPRO_29610 PF00571 CBS domain CPRO_29620 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_29630 PF00528 Binding-protein-dependent transport system inner membrane component CPRO_29640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CPRO_29650 PF13649 Methyltransferase domain CPRO_29660 PF02535 CPRO_29660 CPRO_29670 PF00440 Bacterial regulatory proteins, tetR family CPRO_29680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CPRO_29680 PF03466 LysR substrate binding domain CPRO_29690 PF03601 CPRO_29690 CPRO_29700 PF01042 Endoribonuclease L-PSP CPRO_29710 PF14903 CPRO_29710 CPRO_29730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CPRO_29730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CPRO_29730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CPRO_29730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CPRO_29740 PF07949 YbbR-like protein CPRO_29750 PF02457 DisA bacterial checkpoint controller nucleotide-binding CPRO_29760 PF00152 tRNA synthetases class II (D, K and N) CPRO_29760 PF01336 OB-fold nucleic acid binding domain CPRO_29770 PF01272 Transcription elongation factor, GreA/GreB, C-term CPRO_29770 PF03449 Transcription elongation factor, N-terminal CPRO_29790 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CPRO_29790 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CPRO_29790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CPRO_29790 PF10371 Domain of unknown function CPRO_29790 PF12838 4Fe-4S dicluster domain CPRO_29790 PF17147 CPRO_29790 CPRO_29800 PF01381 Helix-turn-helix CPRO_29820 PF07883 Cupin domain CPRO_29830 PF03807 NADP oxidoreductase coenzyme F420-dependent CPRO_29830 PF14748 Pyrroline-5-carboxylate reductase dimerisation CPRO_29840 PF03960 ArsC family CPRO_29850 PF13561 Enoyl-(Acyl carrier protein) reductase CPRO_29860 PF12724 Flavodoxin domain CPRO_29870 PF03167 Uracil DNA glycosylase superfamily CPRO_29880 PF01694 Rhomboid family CPRO_29890 PF07441 CPRO_29890 CPRO_29900 PF10704 CPRO_29900 CPRO_29930 PF00132 Bacterial transferase hexapeptide (six repeats) CPRO_29930 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CPRO_29930 PF14602 Hexapeptide repeat of succinyl-transferase CPRO_29940 PF01546 Peptidase family M20/M25/M40 CPRO_29940 PF07687 Peptidase dimerisation domain CPRO_29950 PF01047 MarR family CPRO_29960 PF16576 CPRO_29960 CPRO_29970 PF00873 AcrB/AcrD/AcrF family CPRO_29980 PF00753 Metallo-beta-lactamase superfamily CPRO_29990 PF07833 Copper amine oxidase N-terminal domain CPRO_29990 PF11738 Protein of unknown function (DUF3298) CPRO_29990 PF13739 Domain of unknown function (DUF4163) CPRO_30000 PF09719 Putative redox-active protein (C_GCAxxG_C_C) CPRO_30010 PF00037 4Fe-4S binding domain CPRO_30020 PF14697 4Fe-4S dicluster domain CPRO_30040 PF00027 Cyclic nucleotide-binding domain CPRO_30040 PF13545 Crp-like helix-turn-helix domain CPRO_30060 PF00512 His Kinase A (phospho-acceptor) domain CPRO_30060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CPRO_30070 PF00072 Response regulator receiver domain CPRO_30070 PF00486 Transcriptional regulatory protein, C terminal CPRO_30080 PF14262 Domain of unknown function (DUF4353) CPRO_30090 PF16316 CPRO_30090 CPRO_30100 PF09359 VTC domain CPRO_30160 PF12697 Alpha/beta hydrolase family CPRO_30170 PF03061 Thioesterase superfamily CPRO_30180 PF03061 Thioesterase superfamily CPRO_30190 PF02195 ParB-like nuclease domain CPRO_30200 PF02527 rRNA small subunit methyltransferase G CPRO_30220 PF01134 Glucose inhibited division protein A CPRO_30220 PF13932 GidA associated domain 3 CPRO_30230 PF01926 50S ribosome-binding GTPase CPRO_30230 PF10396 GTP-binding protein TrmE N-terminus CPRO_30230 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE CPRO_30240 PF01424 R3H domain CPRO_30240 PF13083 KH domain CPRO_30240 PF14804 Jag N-terminus CPRO_30250 PF02096 60Kd inner membrane protein CPRO_30260 PF01809 CPRO_30260 CPRO_30270 PF00825 Ribonuclease P CPRO_30280 PF00468 Ribosomal protein L34