locus-tag class description NQ528_00005 PF00308 Bacterial dnaA protein NQ528_00005 PF08299 Bacterial dnaA protein helix-turn-helix NQ528_00005 PF11638 DnaA N-terminal domain NQ528_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NQ528_00010 PF02767 DNA polymerase III beta subunit, central domain NQ528_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NQ528_00020 PF02463 RecF/RecN/SMC N terminal domain NQ528_00025 PF04025 Domain of unknown function (DUF370) NQ528_00030 PF00204 DNA gyrase B NQ528_00030 PF00986 DNA gyrase B subunit, carboxyl terminus NQ528_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_00030 PF01751 Toprim domain NQ528_00045 PF03989 DNA gyrase C-terminal domain, beta-propeller NQ528_00045 PF00521 DNA gyrase/topoisomerase IV, subunit A NQ528_00055 PF02690 Na+/Pi-cotransporter NQ528_00060 PF01476 LysM domain NQ528_00060 PF00246 Zinc carboxypeptidase NQ528_00065 PF00293 NUDIX domain NQ528_00070 PF01522 Polysaccharide deacetylase NQ528_00075 PF03180 NLPA lipoprotein NQ528_00080 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_00085 PF00005 ABC transporter NQ528_00085 PF09383 NIL domain NQ528_00090 PF04073 Aminoacyl-tRNA editing domain NQ528_00100 PF00270 DEAD/DEAH box helicase NQ528_00100 PF00271 Helicase conserved C-terminal domain NQ528_00105 PF02464 Competence-damaged protein NQ528_00105 PF18146 Damage-inducible protein CinA KH domain NQ528_00105 PF00994 Probable molybdopterin binding domain NQ528_00115 PF02664 S-Ribosylhomocysteinase (LuxS) NQ528_00130 PF02146 Sir2 family NQ528_00140 PF06874 Firmicute fructose-1,6-bisphosphatase NQ528_00145 PF00709 Adenylosuccinate synthetase NQ528_00150 PF02885 Glycosyl transferase family, helical bundle domain NQ528_00150 PF00591 Glycosyl transferase family, a/b domain NQ528_00150 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NQ528_00155 PF01676 Metalloenzyme superfamily NQ528_00170 PF14437 MafB19-like deaminase NQ528_00185 PF03591 AzlC protein NQ528_00190 PF05437 Branched-chain amino acid transport protein (AzlD) NQ528_00195 PF00583 Acetyltransferase (GNAT) family NQ528_00200 PF03372 Endonuclease/Exonuclease/phosphatase family NQ528_00205 PF01734 Patatin-like phospholipase NQ528_00205 PF00027 Cyclic nucleotide-binding domain NQ528_00210 PF08546 Ketopantoate reductase PanE/ApbA C terminal NQ528_00210 PF02558 Ketopantoate reductase PanE/ApbA NQ528_00215 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NQ528_00220 PF07451 Stage V sporulation protein AD (SpoVAD) NQ528_00225 PF03862 SpoVAC/SpoVAEB sporulation membrane protein NQ528_00240 PF02915 Rubrerythrin NQ528_00245 PF00106 short chain dehydrogenase NQ528_00255 PF00356 Bacterial regulatory proteins, lacI family NQ528_00260 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_00260 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_00270 PF02653 Branched-chain amino acid transport system / permease component NQ528_00280 PF00005 ABC transporter NQ528_00280 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_00285 PF00005 ABC transporter NQ528_00290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQ528_00295 PF02633 Creatinine amidohydrolase NQ528_00300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_00300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_00305 PF01180 Dihydroorotate dehydrogenase NQ528_00310 PF02615 Malate/L-lactate dehydrogenase NQ528_00315 PF00294 pfkB family carbohydrate kinase NQ528_00320 PF01081 KDPG and KHG aldolase NQ528_00335 PF01979 Amidohydrolase family NQ528_00340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQ528_00350 PF02378 Phosphotransferase system, EIIC NQ528_00350 PF00367 phosphotransferase system, EIIB NQ528_00365 PF00381 PTS HPr component phosphorylation site NQ528_00370 PF05524 PEP-utilising enzyme, N-terminal NQ528_00370 PF00391 PEP-utilising enzyme, mobile domain NQ528_00370 PF02896 PEP-utilising enzyme, TIM barrel domain NQ528_00375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NQ528_00375 PF00367 phosphotransferase system, EIIB NQ528_00375 PF02378 Phosphotransferase system, EIIC NQ528_00380 PF00874 PRD domain NQ528_00380 PF03123 CAT RNA binding domain NQ528_00385 PF12116 Stage III sporulation protein D NQ528_00405 PF00248 Aldo/keto reductase family NQ528_00410 PF17910 FeoB cytosolic helical domain NQ528_00410 PF07664 Ferrous iron transport protein B C terminus NQ528_00410 PF07670 Nucleoside recognition NQ528_00410 PF02421 Ferrous iron transport protein B NQ528_00410 PF04023 FeoA domain NQ528_00420 PF02645 Uncharacterised protein, DegV family COG1307 NQ528_00430 PF00892 EamA-like transporter family NQ528_00435 PF03807 NADP oxidoreductase coenzyme F420-dependent NQ528_00435 PF14748 Pyrroline-5-carboxylate reductase dimerisation NQ528_00440 PF01321 Creatinase/Prolidase N-terminal domain NQ528_00440 PF00557 Metallopeptidase family M24 NQ528_00445 PF00005 ABC transporter NQ528_00445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_00450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_00450 PF00005 ABC transporter NQ528_00455 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_00455 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_00460 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_00470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_00475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_00495 PF01541 GIY-YIG catalytic domain NQ528_00530 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NQ528_00530 PF01676 Metalloenzyme superfamily NQ528_00535 PF00121 Triosephosphate isomerase NQ528_00540 PF00162 Phosphoglycerate kinase NQ528_00545 PF02645 Uncharacterised protein, DegV family COG1307 NQ528_00550 PF00588 SpoU rRNA Methylase family NQ528_00645 PF01649 Ribosomal protein S20 NQ528_00660 PF01569 PAP2 superfamily NQ528_00665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQ528_00665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQ528_00665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQ528_00665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQ528_00670 PF03129 Anticodon binding domain NQ528_00670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_00710 PF18766 SWI2/SNF2 ATPase NQ528_00710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQ528_00710 PF11867 Domain of unknown function (DUF3387) NQ528_00760 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_00760 PF00589 Phage integrase family NQ528_00800 PF13635 Domain of unknown function (DUF4143) NQ528_00800 PF13173 AAA domain NQ528_00805 PF00589 Phage integrase family NQ528_00805 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_00810 PF00589 Phage integrase family NQ528_00810 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_00870 PF01580 FtsK/SpoIIIE family NQ528_00870 PF09397 Ftsk gamma domain NQ528_00870 PF17854 FtsK alpha domain NQ528_00870 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NQ528_00935 PF02195 ParB-like nuclease domain NQ528_00940 PF11922 Domain of unknown function (DUF3440) NQ528_00940 PF01507 Phosphoadenosine phosphosulfate reductase family NQ528_00945 PF00672 HAMP domain NQ528_00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_00945 PF02203 Tar ligand binding domain homologue NQ528_00960 PF01381 Helix-turn-helix NQ528_00970 PF01872 RibD C-terminal domain NQ528_00990 PF02086 D12 class N6 adenine-specific DNA methyltransferase NQ528_00995 PF02653 Branched-chain amino acid transport system / permease component NQ528_01000 PF00005 ABC transporter NQ528_01005 PF13407 Periplasmic binding protein domain NQ528_01010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_01010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_01015 PF01261 Xylose isomerase-like TIM barrel NQ528_01020 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_01020 PF02779 Transketolase, pyrimidine binding domain NQ528_01020 PF02780 Transketolase, C-terminal domain NQ528_01025 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_01030 PF00455 DeoR C terminal sensor domain NQ528_01030 PF08220 DeoR-like helix-turn-helix domain NQ528_01035 PF01791 DeoC/LacD family aldolase NQ528_01040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_01045 PF13722 5TM C-terminal transporter carbon starvation CstA NQ528_01045 PF02554 Carbon starvation protein CstA NQ528_01050 PF03883 Peroxide stress protein YaaA NQ528_01075 PF13361 UvrD-like helicase C-terminal domain NQ528_01075 PF00580 UvrD/REP helicase N-terminal domain NQ528_01080 PF00580 UvrD/REP helicase N-terminal domain NQ528_01080 PF13361 UvrD-like helicase C-terminal domain NQ528_01095 PF00664 ABC transporter transmembrane region NQ528_01095 PF00005 ABC transporter NQ528_01100 PF00664 ABC transporter transmembrane region NQ528_01100 PF00005 ABC transporter NQ528_01105 PF00072 Response regulator receiver domain NQ528_01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_01115 PF00512 His Kinase A (phospho-acceptor) domain NQ528_01115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQ528_01115 PF00072 Response regulator receiver domain NQ528_01115 PF01627 Hpt domain NQ528_01115 PF00672 HAMP domain NQ528_01125 PF08220 DeoR-like helix-turn-helix domain NQ528_01125 PF00455 DeoR C terminal sensor domain NQ528_01130 PF01053 Cys/Met metabolism PLP-dependent enzyme NQ528_01135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_01140 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_01145 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_01145 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_01150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_01150 PF00005 ABC transporter NQ528_01155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_01155 PF00005 ABC transporter NQ528_01160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_01160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_01175 PF03466 LysR substrate binding domain NQ528_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_01185 PF13247 4Fe-4S dicluster domain NQ528_01190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQ528_01190 PF00384 Molybdopterin oxidoreductase NQ528_01190 PF01568 Molydopterin dinucleotide binding domain NQ528_01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_01195 PF18113 Rubredoxin binding C-terminal domain NQ528_01220 PF05651 Putative sugar diacid recognition NQ528_01220 PF17853 GGDEF-like domain NQ528_01220 PF13556 PucR C-terminal helix-turn-helix domain NQ528_01225 PF10503 Esterase PHB depolymerase NQ528_01230 PF02447 GntP family permease NQ528_01240 PF02595 Glycerate kinase family NQ528_01245 PF03190 Protein of unknown function, DUF255 NQ528_01250 PF04055 Radical SAM superfamily NQ528_01250 PF13186 Iron-sulfur cluster-binding domain NQ528_01255 PF00392 Bacterial regulatory proteins, gntR family NQ528_01260 PF16347 Domain of unknown function (DUF4976) NQ528_01260 PF00884 Sulfatase NQ528_01265 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_01285 PF02417 Chromate transporter NQ528_01300 PF12849 PBP superfamily domain NQ528_01305 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_01310 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_01315 PF00005 ABC transporter NQ528_01320 PF01895 PhoU domain NQ528_01325 PF00072 Response regulator receiver domain NQ528_01325 PF00486 Transcriptional regulatory protein, C terminal NQ528_01330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_01330 PF16736 Single Cache-like NQ528_01330 PF00512 His Kinase A (phospho-acceptor) domain NQ528_01330 PF00989 PAS fold NQ528_01345 PF00580 UvrD/REP helicase N-terminal domain NQ528_01345 PF13361 UvrD-like helicase C-terminal domain NQ528_01350 PF02653 Branched-chain amino acid transport system / permease component NQ528_01355 PF02653 Branched-chain amino acid transport system / permease component NQ528_01360 PF00005 ABC transporter NQ528_01365 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_01370 PF00156 Phosphoribosyl transferase domain NQ528_01380 PF13193 AMP-binding enzyme C-terminal domain NQ528_01380 PF00501 AMP-binding enzyme NQ528_01385 PF02576 RimP N-terminal domain NQ528_01385 PF17384 RimP C-terminal SH3 domain NQ528_01390 PF00575 S1 RNA binding domain NQ528_01390 PF08529 NusA N-terminal domain NQ528_01390 PF13184 NusA-like KH domain NQ528_01395 PF04296 Protein of unknown function (DUF448) NQ528_01405 PF11987 Translation-initiation factor 2 NQ528_01405 PF00009 Elongation factor Tu GTP binding domain NQ528_01405 PF04760 Translation initiation factor IF-2, N-terminal region NQ528_01410 PF02033 Ribosome-binding factor A NQ528_01415 PF02272 DHHA1 domain NQ528_01415 PF01368 DHH family NQ528_01420 PF09157 Pseudouridine synthase II TruB, C-terminal NQ528_01420 PF16198 tRNA pseudouridylate synthase B C-terminal domain NQ528_01420 PF01509 TruB family pseudouridylate synthase (N terminal domain) NQ528_01425 PF06574 FAD synthetase NQ528_01425 PF01687 Riboflavin kinase NQ528_01430 PF00312 Ribosomal protein S15 NQ528_01435 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NQ528_01435 PF00575 S1 RNA binding domain NQ528_01435 PF03725 3' exoribonuclease family, domain 2 NQ528_01435 PF00013 KH domain NQ528_01435 PF01138 3' exoribonuclease family, domain 1 NQ528_01440 PF01595 Cyclin M transmembrane N-terminal domain NQ528_01440 PF00571 CBS domain NQ528_01440 PF03471 Transporter associated domain NQ528_01445 PF00696 Amino acid kinase family NQ528_01450 PF00171 Aldehyde dehydrogenase family NQ528_01460 PF00480 ROK family NQ528_01465 PF00480 ROK family NQ528_01470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_01470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_01480 PF02653 Branched-chain amino acid transport system / permease component NQ528_01485 PF13407 Periplasmic binding protein domain NQ528_01490 PF00005 ABC transporter NQ528_01500 PF00285 Citrate synthase, C-terminal domain NQ528_01505 PF08486 Stage II sporulation protein NQ528_01520 PF00155 Aminotransferase class I and II NQ528_01530 PF02386 Cation transport protein NQ528_01535 PF00465 Iron-containing alcohol dehydrogenase NQ528_01540 PF01180 Dihydroorotate dehydrogenase NQ528_01545 PF00356 Bacterial regulatory proteins, lacI family NQ528_01550 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NQ528_01555 PF07969 Amidohydrolase family NQ528_01580 PF09962 Uncharacterized conserved protein (DUF2196) NQ528_01585 PF03960 ArsC family NQ528_01590 PF02272 DHHA1 domain NQ528_01590 PF01411 tRNA synthetases class II (A) NQ528_01590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQ528_01605 PF13411 MerR HTH family regulatory protein NQ528_01605 PF06445 GyrI-like small molecule binding domain NQ528_01620 PF01212 Beta-eliminating lyase NQ528_01630 PF07969 Amidohydrolase family NQ528_01640 PF00005 ABC transporter NQ528_01640 PF08402 TOBE domain NQ528_01645 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_01650 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_01655 PF13416 Bacterial extracellular solute-binding protein NQ528_01665 PF08446 PAS fold NQ528_01665 PF01590 GAF domain NQ528_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_01665 PF00360 Phytochrome region NQ528_01675 PF00037 4Fe-4S binding domain NQ528_01675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQ528_01675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NQ528_01680 PF00037 4Fe-4S binding domain NQ528_01680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NQ528_01680 PF02906 Iron only hydrogenase large subunit, C-terminal domain NQ528_01680 PF02256 Iron hydrogenase small subunit NQ528_01685 PF02780 Transketolase, C-terminal domain NQ528_01685 PF02779 Transketolase, pyrimidine binding domain NQ528_01685 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_01690 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_01720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_01720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_01725 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_01725 PF00107 Zinc-binding dehydrogenase NQ528_01730 PF13407 Periplasmic binding protein domain NQ528_01735 PF02653 Branched-chain amino acid transport system / permease component NQ528_01740 PF00005 ABC transporter NQ528_01745 PF00480 ROK family NQ528_01755 PF00795 Carbon-nitrogen hydrolase NQ528_01755 PF02540 NAD synthase NQ528_01760 PF04552 Sigma-54, DNA binding domain NQ528_01760 PF04963 Sigma-54 factor, core binding domain NQ528_01760 PF00309 Sigma-54 factor, Activator interacting domain (AID) NQ528_01775 PF01565 FAD binding domain NQ528_01775 PF02913 FAD linked oxidases, C-terminal domain NQ528_01780 PF00766 Electron transfer flavoprotein FAD-binding domain NQ528_01780 PF01012 Electron transfer flavoprotein domain NQ528_01785 PF01012 Electron transfer flavoprotein domain NQ528_01790 PF01557 Fumarylacetoacetate (FAA) hydrolase family NQ528_01795 PF00005 ABC transporter NQ528_01800 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_01800 PF00005 ABC transporter NQ528_01805 PF02653 Branched-chain amino acid transport system / permease component NQ528_01805 PF11862 Domain of unknown function (DUF3382) NQ528_01810 PF02653 Branched-chain amino acid transport system / permease component NQ528_01815 PF13458 Periplasmic binding protein NQ528_01820 PF00701 Dihydrodipicolinate synthetase family NQ528_01830 PF00465 Iron-containing alcohol dehydrogenase NQ528_01835 PF07729 FCD domain NQ528_01835 PF00392 Bacterial regulatory proteins, gntR family NQ528_01845 PF00672 HAMP domain NQ528_01845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_01845 PF02203 Tar ligand binding domain homologue NQ528_01875 PF00085 Thioredoxin NQ528_01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_01880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQ528_01885 PF00106 short chain dehydrogenase NQ528_01890 PF00440 Bacterial regulatory proteins, tetR family NQ528_01895 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NQ528_01895 PF00072 Response regulator receiver domain NQ528_01895 PF01627 Hpt domain NQ528_01895 PF00512 His Kinase A (phospho-acceptor) domain NQ528_01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_01895 PF00672 HAMP domain NQ528_01900 PF00072 Response regulator receiver domain NQ528_01905 PF00113 Enolase, C-terminal TIM barrel domain NQ528_01905 PF03952 Enolase, N-terminal domain NQ528_01910 PF00258 Flavodoxin NQ528_01930 PF02421 Ferrous iron transport protein B NQ528_01930 PF07664 Ferrous iron transport protein B C terminus NQ528_01930 PF17910 FeoB cytosolic helical domain NQ528_01930 PF07670 Nucleoside recognition NQ528_01950 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_01955 PF06180 Cobalt chelatase (CbiK) NQ528_01970 PF03772 Competence protein NQ528_01970 PF13567 Domain of unknown function (DUF4131) NQ528_01970 PF00753 Metallo-beta-lactamase superfamily NQ528_01975 PF16363 GDP-mannose 4,6 dehydratase NQ528_01980 PF13091 PLD-like domain NQ528_01985 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_01985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NQ528_01990 PF03167 Uracil DNA glycosylase superfamily NQ528_01995 PF06130 Phosphate propanoyltransferase NQ528_02000 PF00072 Response regulator receiver domain NQ528_02000 PF00486 Transcriptional regulatory protein, C terminal NQ528_02005 PF00672 HAMP domain NQ528_02005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_02005 PF18698 Histidine kinase sensor domain NQ528_02005 PF00512 His Kinase A (phospho-acceptor) domain NQ528_02005 PF00989 PAS fold NQ528_02010 PF00209 Sodium:neurotransmitter symporter family NQ528_02030 PF01471 Putative peptidoglycan binding domain NQ528_02030 PF01183 Glycosyl hydrolases family 25 NQ528_02220 PF13401 AAA domain NQ528_02220 PF09077 Mu B transposition protein, C terminal NQ528_02245 PF02498 BRO family, N-terminal domain NQ528_02245 PF10548 P22AR C-terminal domain NQ528_02260 PF13378 Enolase C-terminal domain-like NQ528_02260 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_02265 PF13378 Enolase C-terminal domain-like NQ528_02265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_02275 PF13378 Enolase C-terminal domain-like NQ528_02275 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_02285 PF00392 Bacterial regulatory proteins, gntR family NQ528_02285 PF07729 FCD domain NQ528_02295 PF00005 ABC transporter NQ528_02300 PF00392 Bacterial regulatory proteins, gntR family NQ528_02305 PF00391 PEP-utilising enzyme, mobile domain NQ528_02305 PF00224 Pyruvate kinase, barrel domain NQ528_02305 PF02887 Pyruvate kinase, alpha/beta domain NQ528_02315 PF11842 Domain of unknown function (DUF3362) NQ528_02315 PF04055 Radical SAM superfamily NQ528_02315 PF08497 Radical SAM N-terminal NQ528_02320 PF17854 FtsK alpha domain NQ528_02320 PF09397 Ftsk gamma domain NQ528_02320 PF01580 FtsK/SpoIIIE family NQ528_02325 PF02673 Bacitracin resistance protein BacA NQ528_02330 PF00574 Clp protease NQ528_02335 PF00398 Ribosomal RNA adenine dimethylase NQ528_02355 PF02397 Bacterial sugar transferase NQ528_02360 PF04138 GtrA-like protein NQ528_02365 PF00535 Glycosyl transferase family 2 NQ528_02370 PF01061 ABC-2 type transporter NQ528_02375 PF14524 Wzt C-terminal domain NQ528_02375 PF00005 ABC transporter NQ528_02380 PF17994 Galactofuranosyltransferase 2 N-terminal NQ528_02385 PF03275 UDP-galactopyranose mutase NQ528_02390 PF00535 Glycosyl transferase family 2 NQ528_02395 PF17425 Arylsulfotransferase Ig-like domain NQ528_02395 PF05935 Arylsulfotransferase (ASST) NQ528_02420 PF00535 Glycosyl transferase family 2 NQ528_02430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_02430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_02435 PF06971 Putative DNA-binding protein N-terminus NQ528_02435 PF02629 CoA binding domain NQ528_02440 PF00180 Isocitrate/isopropylmalate dehydrogenase NQ528_02440 PF18324 Hypothetical protein TT1725 NQ528_02460 PF01926 50S ribosome-binding GTPase NQ528_02460 PF06071 Protein of unknown function (DUF933) NQ528_02465 PF00486 Transcriptional regulatory protein, C terminal NQ528_02465 PF00072 Response regulator receiver domain NQ528_02470 PF00512 His Kinase A (phospho-acceptor) domain NQ528_02470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_02470 PF00672 HAMP domain NQ528_02475 PF13180 PDZ domain NQ528_02495 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_02500 PF04297 Putative helix-turn-helix protein, YlxM / p13 like NQ528_02505 PF02978 Signal peptide binding domain NQ528_02505 PF02881 SRP54-type protein, helical bundle domain NQ528_02505 PF00448 SRP54-type protein, GTPase domain NQ528_02510 PF00886 Ribosomal protein S16 NQ528_02520 PF01782 RimM N-terminal domain NQ528_02520 PF05239 PRC-barrel domain NQ528_02525 PF01746 tRNA (Guanine-1)-methyltransferase NQ528_02530 PF00381 PTS HPr component phosphorylation site NQ528_02535 PF08459 UvrC Helix-hairpin-helix N-terminal NQ528_02535 PF02151 UvrB/uvrC motif NQ528_02535 PF01541 GIY-YIG catalytic domain NQ528_02545 PF01467 Cytidylyltransferase-like NQ528_02555 PF00154 recA bacterial DNA recombination protein NQ528_02560 PF02631 RecX family NQ528_02565 PF04055 Radical SAM superfamily NQ528_02565 PF18693 TRAM domain NQ528_02565 PF00919 Uncharacterized protein family UPF0004 NQ528_02570 PF01066 CDP-alcohol phosphatidyltransferase NQ528_02575 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_02580 PF01406 tRNA synthetases class I (C) catalytic domain NQ528_02580 PF09190 DALR domain NQ528_02590 PF03772 Competence protein NQ528_02590 PF00753 Metallo-beta-lactamase superfamily NQ528_02600 PF13331 Domain of unknown function (DUF4093) NQ528_02620 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_02620 PF00107 Zinc-binding dehydrogenase NQ528_02625 PF02653 Branched-chain amino acid transport system / permease component NQ528_02630 PF00005 ABC transporter NQ528_02635 PF13407 Periplasmic binding protein domain NQ528_02640 PF01116 Fructose-bisphosphate aldolase class-II NQ528_02645 PF00294 pfkB family carbohydrate kinase NQ528_02650 PF02734 DAK2 domain NQ528_02655 PF02733 Dak1 domain NQ528_02660 PF08220 DeoR-like helix-turn-helix domain NQ528_02660 PF00455 DeoR C terminal sensor domain NQ528_02670 PF03764 Elongation factor G, domain IV NQ528_02670 PF00009 Elongation factor Tu GTP binding domain NQ528_02670 PF00679 Elongation factor G C-terminus NQ528_02670 PF14492 Elongation Factor G, domain II NQ528_02675 PF01048 Phosphorylase superfamily NQ528_02680 PF02653 Branched-chain amino acid transport system / permease component NQ528_02685 PF02653 Branched-chain amino acid transport system / permease component NQ528_02690 PF00005 ABC transporter NQ528_02695 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_02700 PF01791 DeoC/LacD family aldolase NQ528_02705 PF00455 DeoR C terminal sensor domain NQ528_02705 PF08220 DeoR-like helix-turn-helix domain NQ528_02715 PF07883 Cupin domain NQ528_02720 PF07687 Peptidase dimerisation domain NQ528_02720 PF01546 Peptidase family M20/M25/M40 NQ528_02725 PF02447 GntP family permease NQ528_02730 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_02735 PF09861 Lactate racemase N-terminal domain NQ528_02745 PF01661 Macro domain NQ528_02750 PF03553 Na+/H+ antiporter family NQ528_02755 PF00072 Response regulator receiver domain NQ528_02755 PF00486 Transcriptional regulatory protein, C terminal NQ528_02760 PF13493 Domain of unknown function (DUF4118) NQ528_02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_02760 PF00512 His Kinase A (phospho-acceptor) domain NQ528_02760 PF02702 Osmosensitive K+ channel His kinase sensor domain NQ528_02770 PF02080 TrkA-C domain NQ528_02770 PF02254 TrkA-N domain NQ528_02775 PF02386 Cation transport protein NQ528_02790 PF02669 K+-transporting ATPase, c chain NQ528_02800 PF03814 Potassium-transporting ATPase A subunit NQ528_02805 PF13493 Domain of unknown function (DUF4118) NQ528_02805 PF00512 His Kinase A (phospho-acceptor) domain NQ528_02805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_02805 PF02702 Osmosensitive K+ channel His kinase sensor domain NQ528_02825 PF01964 Radical SAM ThiC family NQ528_02835 PF00581 Rhodanese-like domain NQ528_02885 PF00403 Heavy-metal-associated domain NQ528_02890 PF02583 Metal-sensitive transcriptional repressor NQ528_02915 PF13407 Periplasmic binding protein domain NQ528_02925 PF00672 HAMP domain NQ528_02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_02925 PF06580 Histidine kinase NQ528_02925 PF02743 Cache domain NQ528_02930 PF00072 Response regulator receiver domain NQ528_02930 PF12833 Helix-turn-helix domain NQ528_02935 PF02653 Branched-chain amino acid transport system / permease component NQ528_02940 PF00005 ABC transporter NQ528_02945 PF13407 Periplasmic binding protein domain NQ528_02950 PF01475 Ferric uptake regulator family NQ528_02955 PF01297 Zinc-uptake complex component A periplasmic NQ528_02960 PF00005 ABC transporter NQ528_02965 PF00950 ABC 3 transport family NQ528_02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_02970 PF00672 HAMP domain NQ528_02970 PF02203 Tar ligand binding domain homologue NQ528_02975 PF02796 Helix-turn-helix domain of resolvase NQ528_02975 PF00239 Resolvase, N terminal domain NQ528_02980 PF01381 Helix-turn-helix NQ528_02985 PF02742 Iron dependent repressor, metal binding and dimerisation domain NQ528_02985 PF01325 Iron dependent repressor, N-terminal DNA binding domain NQ528_02990 PF02535 ZIP Zinc transporter NQ528_02995 PF00005 ABC transporter NQ528_03000 PF01458 Uncharacterized protein family (UPF0051) NQ528_03020 PF01554 MatE NQ528_03025 PF03313 Serine dehydratase alpha chain NQ528_03030 PF01842 ACT domain NQ528_03030 PF03315 Serine dehydratase beta chain NQ528_03045 PF02508 Rnf-Nqr subunit, membrane protein NQ528_03050 PF02508 Rnf-Nqr subunit, membrane protein NQ528_03055 PF03116 NQR2, RnfD, RnfE family NQ528_03070 PF00834 Ribulose-phosphate 3 epimerase family NQ528_03135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_03135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_03145 PF01261 Xylose isomerase-like TIM barrel NQ528_03150 PF00356 Bacterial regulatory proteins, lacI family NQ528_03160 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_03165 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_03170 PF00005 ABC transporter NQ528_03170 PF08402 TOBE domain NQ528_03175 PF06134 L-rhamnose isomerase (RhaA) NQ528_03180 PF01156 Inosine-uridine preferring nucleoside hydrolase NQ528_03185 PF00465 Iron-containing alcohol dehydrogenase NQ528_03210 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NQ528_03210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NQ528_03215 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NQ528_03220 PF03480 Bacterial extracellular solute-binding protein, family 7 NQ528_03225 PF00701 Dihydrodipicolinate synthetase family NQ528_03235 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_03235 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_03235 PF01842 ACT domain NQ528_03240 PF09339 IclR helix-turn-helix domain NQ528_03240 PF01614 Bacterial transcriptional regulator NQ528_03245 PF00107 Zinc-binding dehydrogenase NQ528_03245 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_03255 PF00356 Bacterial regulatory proteins, lacI family NQ528_03260 PF08450 SMP-30/Gluconolactonase/LRE-like region NQ528_03265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_03265 PF13378 Enolase C-terminal domain-like NQ528_03275 PF00005 ABC transporter NQ528_03280 PF02653 Branched-chain amino acid transport system / permease component NQ528_03285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NQ528_03295 PF17128 Domain of unknown function (DUF5107) NQ528_03295 PF13181 Tetratricopeptide repeat NQ528_03305 PF14262 Carbohydrate-binding domain-containing protein Cthe_2159 NQ528_03320 PF00072 Response regulator receiver domain NQ528_03320 PF00486 Transcriptional regulatory protein, C terminal NQ528_03325 PF00989 PAS fold NQ528_03325 PF00512 His Kinase A (phospho-acceptor) domain NQ528_03325 PF11808 Phosphate regulon sensor protein PhoR NQ528_03325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_03330 PF06418 CTP synthase N-terminus NQ528_03330 PF00117 Glutamine amidotransferase class-I NQ528_03335 PF03861 ANTAR domain NQ528_03335 PF08376 Nitrate and nitrite sensing NQ528_03340 PF00120 Glutamine synthetase, catalytic domain NQ528_03340 PF03951 Glutamine synthetase, beta-Grasp domain NQ528_03350 PF13187 4Fe-4S dicluster domain NQ528_03350 PF01645 Conserved region in glutamate synthase NQ528_03355 PF00310 Glutamine amidotransferases class-II NQ528_03360 PF03590 Aspartate-ammonia ligase NQ528_03365 PF18318 Glutamine synthetase C-terminal domain NQ528_03365 PF12437 Glutamine synthetase type III N terminal NQ528_03365 PF00120 Glutamine synthetase, catalytic domain NQ528_03395 PF01183 Glycosyl hydrolases family 25 NQ528_03395 PF01471 Putative peptidoglycan binding domain NQ528_03415 PF04260 Protein of unknown function (DUF436) NQ528_03420 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NQ528_03430 PF07729 FCD domain NQ528_03430 PF00392 Bacterial regulatory proteins, gntR family NQ528_03435 PF01979 Amidohydrolase family NQ528_03440 PF00860 Permease family NQ528_03445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_03445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_03450 PF03450 CO dehydrogenase flavoprotein C-terminal domain NQ528_03450 PF00941 FAD binding domain in molybdopterin dehydrogenase NQ528_03455 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_03455 PF01799 [2Fe-2S] binding domain NQ528_03460 PF01967 MoaC family NQ528_03465 PF00994 Probable molybdopterin binding domain NQ528_03465 PF18146 Damage-inducible protein CinA KH domain NQ528_03465 PF02464 Competence-damaged protein NQ528_03475 PF00860 Permease family NQ528_03480 PF13309 HTH domain NQ528_03480 PF08348 YheO-like PAS domain NQ528_03490 PF01979 Amidohydrolase family NQ528_03495 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQ528_03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_03500 PF01979 Amidohydrolase family NQ528_03510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_03510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_03515 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_03520 PF01546 Peptidase family M20/M25/M40 NQ528_03520 PF07687 Peptidase dimerisation domain NQ528_03525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQ528_03525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQ528_03530 PF00696 Amino acid kinase family NQ528_03550 PF00266 Aminotransferase class-V NQ528_03555 PF12390 Selenocysteine synthase N terminal NQ528_03555 PF03841 L-seryl-tRNA selenium transferase NQ528_03560 PF09107 Elongation factor SelB, winged helix NQ528_03560 PF09105 Elongation factor SelB, winged helix NQ528_03560 PF09106 Elongation factor SelB, winged helix NQ528_03560 PF00009 Elongation factor Tu GTP binding domain NQ528_03560 PF03144 Elongation factor Tu domain 2 NQ528_03580 PF00871 Acetokinase family NQ528_03630 PF01979 Amidohydrolase family NQ528_03635 PF07071 KDGP aldolase NQ528_03640 PF03841 L-seryl-tRNA selenium transferase NQ528_03670 PF01979 Amidohydrolase family NQ528_03675 PF03123 CAT RNA binding domain NQ528_03675 PF00874 PRD domain NQ528_03680 PF01420 Type I restriction modification DNA specificity domain NQ528_03685 PF01420 Type I restriction modification DNA specificity domain NQ528_03705 PF13276 HTH-like domain NQ528_03705 PF13333 Integrase core domain NQ528_03705 PF00665 Integrase core domain NQ528_03710 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NQ528_03710 PF01348 Type II intron maturase NQ528_03725 PF01381 Helix-turn-helix NQ528_03755 PF18277 AbrB C-terminal domain NQ528_03755 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NQ528_03795 PF00436 Single-strand binding protein family NQ528_03810 PF07486 Cell Wall Hydrolase NQ528_03810 PF01471 Putative peptidoglycan binding domain NQ528_03825 PF09397 Ftsk gamma domain NQ528_03825 PF17854 FtsK alpha domain NQ528_03825 PF01580 FtsK/SpoIIIE family NQ528_03850 PF17762 HTH domain found in ParB protein NQ528_03850 PF02195 ParB-like nuclease domain NQ528_04065 PF01183 Glycosyl hydrolases family 25 NQ528_04065 PF01471 Putative peptidoglycan binding domain NQ528_04120 PF13635 Domain of unknown function (DUF4143) NQ528_04120 PF13173 AAA domain NQ528_04130 PF11798 IMS family HHH motif NQ528_04130 PF00817 impB/mucB/samB family NQ528_04130 PF11799 impB/mucB/samB family C-terminal domain NQ528_04160 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NQ528_04220 PF01139 tRNA-splicing ligase RtcB NQ528_04505 PF01476 LysM domain NQ528_04505 PF08525 Opacity-associated protein A N-terminal motif NQ528_04505 PF01551 Peptidase family M23 NQ528_04540 PF00145 C-5 cytosine-specific DNA methylase NQ528_04625 PF00437 Type II/IV secretion system protein NQ528_04640 PF06750 Bacterial Peptidase A24 N-terminal domain NQ528_04640 PF01478 Type IV leader peptidase family NQ528_04650 PF04026 SpoVG NQ528_04745 PF00270 DEAD/DEAH box helicase NQ528_04745 PF00271 Helicase conserved C-terminal domain NQ528_04745 PF17191 RecG wedge domain NQ528_04750 PF00871 Acetokinase family NQ528_04765 PF03062 MBOAT, membrane-bound O-acyltransferase family NQ528_04780 PF00912 Transglycosylase NQ528_04780 PF00905 Penicillin binding protein transpeptidase domain NQ528_04790 PF03309 Type III pantothenate kinase NQ528_04825 PF00561 alpha/beta hydrolase fold NQ528_04835 PF01047 MarR family NQ528_04855 PF05670 NFACT protein RNA binding domain NQ528_04860 PF00155 Aminotransferase class I and II NQ528_04865 PF01037 Lrp/AsnC ligand binding domain NQ528_04880 PF05167 Uncharacterised ACR (DUF711) NQ528_04915 PF01726 LexA DNA binding domain NQ528_04915 PF00717 Peptidase S24-like NQ528_04920 PF00719 Inorganic pyrophosphatase NQ528_04925 PF07664 Ferrous iron transport protein B C terminus NQ528_04925 PF02421 Ferrous iron transport protein B NQ528_04925 PF07670 Nucleoside recognition NQ528_04925 PF17910 FeoB cytosolic helical domain NQ528_04930 PF03788 LrgA family NQ528_04935 PF04172 LrgB-like family NQ528_04940 PF01966 HD domain NQ528_04940 PF00013 KH domain NQ528_04940 PF12072 Domain of unknown function (DUF3552) NQ528_04945 PF03129 Anticodon binding domain NQ528_04945 PF02824 TGS domain NQ528_04945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_04945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQ528_04955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQ528_04960 PF00753 Metallo-beta-lactamase superfamily NQ528_04965 PF02590 Predicted SPOUT methyltransferase NQ528_04970 PF01522 Polysaccharide deacetylase NQ528_04970 PF14883 Hypothetical glycosyl hydrolase family 13 NQ528_04975 PF00270 DEAD/DEAH box helicase NQ528_04975 PF00271 Helicase conserved C-terminal domain NQ528_04980 PF02872 5'-nucleotidase, C-terminal domain NQ528_04980 PF00149 Calcineurin-like phosphoesterase NQ528_05000 PF09370 Phosphoenolpyruvate hydrolase-like NQ528_05035 PF01541 GIY-YIG catalytic domain NQ528_05035 PF12826 Helix-hairpin-helix motif NQ528_05035 PF02151 UvrB/uvrC motif NQ528_05035 PF08459 UvrC Helix-hairpin-helix N-terminal NQ528_05040 PF03006 Haemolysin-III related NQ528_05050 PF02638 Glycosyl hydrolase-like 10 NQ528_05055 PF11741 AMIN domain NQ528_05055 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_05060 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B NQ528_05060 PF00175 Oxidoreductase NAD-binding domain NQ528_05065 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_05065 PF13247 4Fe-4S dicluster domain NQ528_05065 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQ528_05070 PF04225 Opacity-associated protein A LysM-like domain NQ528_05070 PF01551 Peptidase family M23 NQ528_05095 PF07883 Cupin domain NQ528_05100 PF01245 Ribosomal protein L19 NQ528_05105 PF10502 Signal peptidase, peptidase S26 NQ528_05110 PF10502 Signal peptidase, peptidase S26 NQ528_05115 PF01926 50S ribosome-binding GTPase NQ528_05120 PF01351 Ribonuclease HII NQ528_05125 PF02021 Uncharacterised protein family UPF0102 NQ528_05140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NQ528_05140 PF05698 Bacterial trigger factor protein (TF) C-terminus NQ528_05140 PF05697 Bacterial trigger factor protein (TF) NQ528_05145 PF00574 Clp protease NQ528_05150 PF07724 AAA domain (Cdc48 subfamily) NQ528_05150 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_05150 PF06689 ClpX C4-type zinc finger NQ528_05155 PF02190 ATP-dependent protease La (LON) substrate-binding domain NQ528_05155 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_05155 PF05362 Lon protease (S16) C-terminal proteolytic domain NQ528_05160 PF01926 50S ribosome-binding GTPase NQ528_05165 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NQ528_05165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NQ528_05170 PF01371 Trp repressor protein NQ528_05175 PF13649 Methyltransferase domain NQ528_05180 PF01430 Hsp33 protein NQ528_05190 PF00633 Helix-hairpin-helix motif NQ528_05190 PF00730 HhH-GPD superfamily base excision DNA repair protein NQ528_05210 PF01594 AI-2E family transporter NQ528_05220 PF00391 PEP-utilising enzyme, mobile domain NQ528_05220 PF02896 PEP-utilising enzyme, TIM barrel domain NQ528_05220 PF05524 PEP-utilising enzyme, N-terminal NQ528_05230 PF00664 ABC transporter transmembrane region NQ528_05230 PF00005 ABC transporter NQ528_05235 PF00664 ABC transporter transmembrane region NQ528_05235 PF00005 ABC transporter NQ528_05245 PF00072 Response regulator receiver domain NQ528_05245 PF00486 Transcriptional regulatory protein, C terminal NQ528_05255 PF04545 Sigma-70, region 4 NQ528_05255 PF04542 Sigma-70 region 2 NQ528_05265 PF00365 Phosphofructokinase NQ528_05300 PF00672 HAMP domain NQ528_05300 PF07228 Stage II sporulation protein E (SpoIIE) NQ528_05305 PF13581 Histidine kinase-like ATPase domain NQ528_05325 PF00664 ABC transporter transmembrane region NQ528_05325 PF00005 ABC transporter NQ528_05325 PF03412 Peptidase C39 family NQ528_05330 PF00664 ABC transporter transmembrane region NQ528_05330 PF00005 ABC transporter NQ528_05330 PF03412 Peptidase C39 family NQ528_05335 PF01740 STAS domain NQ528_05345 PF00873 AcrB/AcrD/AcrF family NQ528_05350 PF00529 HlyD membrane-fusion protein of T1SS NQ528_05350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQ528_05355 PF00202 Aminotransferase class-III NQ528_05360 PF00490 Delta-aminolevulinic acid dehydratase NQ528_05365 PF02602 Uroporphyrinogen-III synthase HemD NQ528_05365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_05370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NQ528_05370 PF03900 Porphobilinogen deaminase, C-terminal domain NQ528_05375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NQ528_05375 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_05380 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NQ528_05380 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_05400 PF01628 HrcA protein C terminal domain NQ528_05405 PF01025 GrpE NQ528_05410 PF00012 Hsp70 protein NQ528_05415 PF00226 DnaJ domain NQ528_05415 PF01556 DnaJ C terminal domain NQ528_05415 PF00684 DnaJ central domain NQ528_05425 PF04452 RNA methyltransferase NQ528_05430 PF02557 D-alanyl-D-alanine carboxypeptidase NQ528_05455 PF00005 ABC transporter NQ528_05460 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_05465 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_05470 PF00933 Glycosyl hydrolase family 3 N terminal domain NQ528_05470 PF01915 Glycosyl hydrolase family 3 C-terminal domain NQ528_05475 PF13458 Periplasmic binding protein NQ528_05480 PF02653 Branched-chain amino acid transport system / permease component NQ528_05485 PF02653 Branched-chain amino acid transport system / permease component NQ528_05485 PF11862 Domain of unknown function (DUF3382) NQ528_05490 PF00005 ABC transporter NQ528_05490 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_05495 PF00005 ABC transporter NQ528_05500 PF04073 Aminoacyl-tRNA editing domain NQ528_05505 PF00128 Alpha amylase, catalytic domain NQ528_05510 PF02915 Rubrerythrin NQ528_05515 PF01475 Ferric uptake regulator family NQ528_05520 PF01813 ATP synthase subunit D NQ528_05525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQ528_05525 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQ528_05530 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQ528_05530 PF16886 ATPsynthase alpha/beta subunit N-term extension NQ528_05530 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQ528_05535 PF01990 ATP synthase (F/14-kDa) subunit NQ528_05550 PF00137 ATP synthase subunit C NQ528_05555 PF01496 V-type ATPase 116kDa subunit family NQ528_05570 PF00005 ABC transporter NQ528_05575 PF02687 FtsX-like permease family NQ528_05575 PF12704 MacB-like periplasmic core domain NQ528_05580 PF08903 Domain of unknown function (DUF1846) NQ528_05585 PF01116 Fructose-bisphosphate aldolase class-II NQ528_05590 PF00005 ABC transporter NQ528_05595 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_05600 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_05605 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NQ528_05605 PF01926 50S ribosome-binding GTPase NQ528_05615 PF06968 Biotin and Thiamin Synthesis associated domain NQ528_05615 PF04055 Radical SAM superfamily NQ528_05630 PF00270 DEAD/DEAH box helicase NQ528_05630 PF12343 Cold shock protein DEAD box A NQ528_05630 PF00271 Helicase conserved C-terminal domain NQ528_05630 PF03880 DbpA RNA binding domain NQ528_05635 PF00474 Sodium:solute symporter family NQ528_05640 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NQ528_05640 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NQ528_05650 PF02599 Global regulator protein family NQ528_05655 PF00700 Bacterial flagellin C-terminal helical region NQ528_05655 PF00669 Bacterial flagellin N-terminal helical region NQ528_05660 PF00700 Bacterial flagellin C-terminal helical region NQ528_05660 PF00669 Bacterial flagellin N-terminal helical region NQ528_05665 PF01501 Glycosyl transferase family 8 NQ528_05665 PF00535 Glycosyl transferase family 2 NQ528_05670 PF00483 Nucleotidyl transferase NQ528_05680 PF01370 NAD dependent epimerase/dehydratase family NQ528_05685 PF16363 GDP-mannose 4,6 dehydratase NQ528_05690 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_05695 PF02779 Transketolase, pyrimidine binding domain NQ528_05695 PF02780 Transketolase, C-terminal domain NQ528_05695 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_05705 PF03275 UDP-galactopyranose mutase NQ528_05710 PF00535 Glycosyl transferase family 2 NQ528_05710 PF01501 Glycosyl transferase family 8 NQ528_05715 PF00535 Glycosyl transferase family 2 NQ528_05715 PF01501 Glycosyl transferase family 8 NQ528_05730 PF08942 Domain of unknown function (DUF1919) NQ528_05755 PF00391 PEP-utilising enzyme, mobile domain NQ528_05755 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NQ528_05760 PF07722 Peptidase C26 NQ528_05765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NQ528_05770 PF02811 PHP domain NQ528_05780 PF01814 Hemerythrin HHE cation binding domain NQ528_05790 PF00072 Response regulator receiver domain NQ528_05790 PF00486 Transcriptional regulatory protein, C terminal NQ528_05795 PF00512 His Kinase A (phospho-acceptor) domain NQ528_05795 PF00989 PAS fold NQ528_05795 PF16736 Single Cache-like NQ528_05795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_05800 PF03413 Peptidase propeptide and YPEB domain NQ528_05805 PF02887 Pyruvate kinase, alpha/beta domain NQ528_05805 PF00391 PEP-utilising enzyme, mobile domain NQ528_05805 PF00224 Pyruvate kinase, barrel domain NQ528_05820 PF00207 Alpha-2-macroglobulin family NQ528_05820 PF07703 Alpha-2-macroglobulin bait region domain NQ528_05820 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NQ528_05820 PF01835 MG2 domain NQ528_05820 PF07678 A-macroglobulin TED domain NQ528_05830 PF00535 Glycosyl transferase family 2 NQ528_05830 PF13181 Tetratricopeptide repeat NQ528_05835 PF01048 Phosphorylase superfamily NQ528_05845 PF03063 Prismane/CO dehydrogenase family NQ528_05855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NQ528_05855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NQ528_05900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_05905 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_05905 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_05915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_05920 PF03606 C4-dicarboxylate anaerobic carrier NQ528_05925 PF01467 Cytidylyltransferase-like NQ528_05935 PF13411 MerR HTH family regulatory protein NQ528_05985 PF01348 Type II intron maturase NQ528_05985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NQ528_06030 PF01047 MarR family NQ528_06030 PF00480 ROK family NQ528_06040 PF13407 Periplasmic binding protein domain NQ528_06045 PF00005 ABC transporter NQ528_06050 PF02653 Branched-chain amino acid transport system / permease component NQ528_06065 PF03454 MoeA C-terminal region (domain IV) NQ528_06065 PF00994 Probable molybdopterin binding domain NQ528_06065 PF03453 MoeA N-terminal region (domain I and II) NQ528_06070 PF01209 ubiE/COQ5 methyltransferase family NQ528_06075 PF01032 FecCD transport family NQ528_06100 PF04055 Radical SAM superfamily NQ528_06120 PF03432 Relaxase/Mobilisation nuclease domain NQ528_06145 PF18840 Large polyvalent protein associated domain 25 NQ528_06150 PF01751 Toprim domain NQ528_06150 PF01131 DNA topoisomerase NQ528_06175 PF01555 DNA methylase NQ528_06215 PF01807 CHC2 zinc finger NQ528_06215 PF10410 DnaB-helicase binding domain of primase NQ528_06215 PF08278 DNA primase DnaG DnaB-binding NQ528_06215 PF08275 DNA primase catalytic core, N-terminal domain NQ528_06220 PF17841 BID domain of Bartonella effector protein (Bep) NQ528_06220 PF03389 MobA/MobL family NQ528_06220 PF01443 Viral (Superfamily 1) RNA helicase NQ528_06250 PF01381 Helix-turn-helix NQ528_06315 PF13490 Putative zinc-finger NQ528_06320 PF04542 Sigma-70 region 2 NQ528_06320 PF08281 Sigma-70, region 4 NQ528_06355 PF01443 Viral (Superfamily 1) RNA helicase NQ528_06355 PF17841 BID domain of Bartonella effector protein (Bep) NQ528_06355 PF03389 MobA/MobL family NQ528_06400 PF01032 FecCD transport family NQ528_06405 PF00005 ABC transporter NQ528_06410 PF01497 Periplasmic binding protein NQ528_06415 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NQ528_06415 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NQ528_06420 PF04227 Indigoidine synthase A like protein NQ528_06425 PF00294 pfkB family carbohydrate kinase NQ528_06440 PF01380 SIS domain NQ528_06440 PF00571 CBS domain NQ528_06445 PF00294 pfkB family carbohydrate kinase NQ528_06450 PF00356 Bacterial regulatory proteins, lacI family NQ528_06465 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_06480 PF00701 Dihydrodipicolinate synthetase family NQ528_06495 PF01381 Helix-turn-helix NQ528_06515 PF01546 Peptidase family M20/M25/M40 NQ528_06520 PF03169 OPT oligopeptide transporter protein NQ528_06535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NQ528_06545 PF07664 Ferrous iron transport protein B C terminus NQ528_06545 PF17910 FeoB cytosolic helical domain NQ528_06545 PF02421 Ferrous iron transport protein B NQ528_06545 PF07670 Nucleoside recognition NQ528_06555 PF12833 Helix-turn-helix domain NQ528_06560 PF02342 TerD domain NQ528_06565 PF00689 Cation transporting ATPase, C-terminus NQ528_06565 PF00690 Cation transporter/ATPase, N-terminus NQ528_06575 PF15608 PELOTA RNA binding domain NQ528_06575 PF11202 Phosphoribosyl transferase (PRTase) NQ528_06590 PF02342 TerD domain NQ528_06595 PF02342 TerD domain NQ528_06600 PF02342 TerD domain NQ528_06605 PF05816 Toxic anion resistance protein (TelA) NQ528_06615 PF02342 TerD domain NQ528_06625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NQ528_06625 PF00056 lactate/malate dehydrogenase, NAD binding domain NQ528_06630 PF00183 Hsp90 protein NQ528_06635 PF13419 Haloacid dehalogenase-like hydrolase NQ528_06645 PF00474 Sodium:solute symporter family NQ528_06670 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_06670 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_06670 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_06685 PF12705 PD-(D/E)XK nuclease superfamily NQ528_06690 PF12705 PD-(D/E)XK nuclease superfamily NQ528_06695 PF12705 PD-(D/E)XK nuclease superfamily NQ528_06695 PF00580 UvrD/REP helicase N-terminal domain NQ528_06695 PF13361 UvrD-like helicase C-terminal domain NQ528_06705 PF00707 Translation initiation factor IF-3, C-terminal domain NQ528_06705 PF05198 Translation initiation factor IF-3, N-terminal domain NQ528_06710 PF01632 Ribosomal protein L35 NQ528_06715 PF00453 Ribosomal protein L20 NQ528_06720 PF08032 RNA 2'-O ribose methyltransferase substrate binding NQ528_06720 PF00588 SpoU rRNA Methylase family NQ528_06725 PF02481 DNA recombination-mediator protein A NQ528_06725 PF17782 DprA winged helix domain NQ528_06730 PF01131 DNA topoisomerase NQ528_06730 PF01396 Topoisomerase DNA binding C4 zinc finger NQ528_06730 PF01751 Toprim domain NQ528_06735 PF01134 Glucose inhibited division protein A NQ528_06740 PF02504 Fatty acid synthesis protein NQ528_06745 PF00035 Double-stranded RNA binding motif NQ528_06745 PF14622 Ribonuclease-III-like NQ528_06750 PF00583 Acetyltransferase (GNAT) family NQ528_06750 PF04055 Radical SAM superfamily NQ528_06750 PF16199 Radical_SAM C-terminal domain NQ528_06755 PF02463 RecF/RecN/SMC N terminal domain NQ528_06755 PF06470 SMC proteins Flexible Hinge Domain NQ528_06760 PF00448 SRP54-type protein, GTPase domain NQ528_06760 PF02881 SRP54-type protein, helical bundle domain NQ528_06765 PF01725 Ham1 family NQ528_06770 PF01985 CRS1 / YhbY (CRM) domain NQ528_06775 PF01467 Cytidylyltransferase-like NQ528_06780 PF01966 HD domain NQ528_06790 PF08264 Anticodon-binding domain of tRNA NQ528_06790 PF00133 tRNA synthetases class I (I, L, M and V) NQ528_06790 PF13603 Leucyl-tRNA synthetase, Domain 2 NQ528_06790 PF09334 tRNA synthetases class I (M) NQ528_06795 PF01165 Ribosomal protein S21 NQ528_06805 PF01220 Dehydroquinase class II NQ528_06810 PF01321 Creatinase/Prolidase N-terminal domain NQ528_06810 PF00557 Metallopeptidase family M24 NQ528_06815 PF01132 Elongation factor P (EF-P) OB domain NQ528_06815 PF08207 Elongation factor P (EF-P) KOW-like domain NQ528_06815 PF09285 Elongation factor P, C-terminal NQ528_06825 PF02424 ApbE family NQ528_06835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQ528_06835 PF13237 4Fe-4S dicluster domain NQ528_06835 PF13375 RnfC Barrel sandwich hybrid domain NQ528_06835 PF10531 SLBB domain NQ528_06840 PF03116 NQR2, RnfD, RnfE family NQ528_06850 PF02508 Rnf-Nqr subunit, membrane protein NQ528_06855 PF02508 Rnf-Nqr subunit, membrane protein NQ528_06860 PF04060 Putative Fe-S cluster NQ528_06865 PF01479 S4 domain NQ528_06865 PF00849 RNA pseudouridylate synthase NQ528_06870 PF04002 RadC-like JAB domain NQ528_06875 PF03466 LysR substrate binding domain NQ528_06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_06880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_06885 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_06890 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_06890 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_06895 PF00005 ABC transporter NQ528_06895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_06900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_06900 PF00005 ABC transporter NQ528_06905 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_06910 PF00578 AhpC/TSA family NQ528_06920 PF00817 impB/mucB/samB family NQ528_06920 PF11799 impB/mucB/samB family C-terminal domain NQ528_06930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_06930 PF03466 LysR substrate binding domain NQ528_06935 PF01032 FecCD transport family NQ528_06940 PF00005 ABC transporter NQ528_06945 PF00248 Aldo/keto reductase family NQ528_06950 PF01497 Periplasmic binding protein NQ528_06960 PF01979 Amidohydrolase family NQ528_06965 PF00155 Aminotransferase class I and II NQ528_06980 PF01979 Amidohydrolase family NQ528_07025 PF08463 EcoEI R protein C-terminal NQ528_07025 PF00271 Helicase conserved C-terminal domain NQ528_07025 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQ528_07025 PF04851 Type III restriction enzyme, res subunit NQ528_07030 PF00271 Helicase conserved C-terminal domain NQ528_07030 PF08463 EcoEI R protein C-terminal NQ528_07030 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NQ528_07030 PF04851 Type III restriction enzyme, res subunit NQ528_07035 PF01420 Type I restriction modification DNA specificity domain NQ528_07045 PF02384 N-6 DNA Methylase NQ528_07045 PF12161 HsdM N-terminal domain NQ528_07085 PF01557 Fumarylacetoacetate (FAA) hydrolase family NQ528_07090 PF01614 Bacterial transcriptional regulator NQ528_07090 PF09339 IclR helix-turn-helix domain NQ528_07095 PF03812 2-keto-3-deoxygluconate permease NQ528_07105 PF08666 SAF domain NQ528_07105 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NQ528_07110 PF00682 HMGL-like NQ528_07110 PF08502 LeuA allosteric (dimerisation) domain NQ528_07125 PF01380 SIS domain NQ528_07125 PF01418 Helix-turn-helix domain, rpiR family NQ528_07135 PF02224 Cytidylate kinase NQ528_07145 PF00575 S1 RNA binding domain NQ528_07145 PF02401 LytB protein NQ528_07150 PF01368 DHH family NQ528_07150 PF02272 DHHA1 domain NQ528_07150 PF17768 RecJ OB domain NQ528_07155 PF13291 ACT domain NQ528_07155 PF04607 Region found in RelA / SpoT proteins NQ528_07155 PF02824 TGS domain NQ528_07160 PF02580 D-Tyr-tRNA(Tyr) deacylase NQ528_07165 PF00753 Metallo-beta-lactamase superfamily NQ528_07170 PF04055 Radical SAM superfamily NQ528_07180 PF01554 MatE NQ528_07185 PF01048 Phosphorylase superfamily NQ528_07190 PF01943 Polysaccharide biosynthesis protein NQ528_07190 PF14667 Polysaccharide biosynthesis C-terminal domain NQ528_07195 PF03819 MazG nucleotide pyrophosphohydrolase domain NQ528_07200 PF00216 Bacterial DNA-binding protein NQ528_07205 PF01479 S4 domain NQ528_07230 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NQ528_07235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_07235 PF00005 ABC transporter NQ528_07240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_07240 PF00005 ABC transporter NQ528_07245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_07250 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_07255 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_07255 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_07260 PF04055 Radical SAM superfamily NQ528_07260 PF02579 Dinitrogenase iron-molybdenum cofactor NQ528_07275 PF00356 Bacterial regulatory proteins, lacI family NQ528_07280 PF03480 Bacterial extracellular solute-binding protein, family 7 NQ528_07285 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NQ528_07330 PF00075 RNase H NQ528_07430 PF02527 rRNA small subunit methyltransferase G NQ528_07450 PF00271 Helicase conserved C-terminal domain NQ528_07450 PF04851 Type III restriction enzyme, res subunit NQ528_07450 PF17757 UvrB interaction domain NQ528_07450 PF12344 Ultra-violet resistance protein B NQ528_07450 PF02151 UvrB/uvrC motif NQ528_07480 PF01614 Bacterial transcriptional regulator NQ528_07480 PF09339 IclR helix-turn-helix domain NQ528_07490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQ528_07490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_07490 PF00205 Thiamine pyrophosphate enzyme, central domain NQ528_07495 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_07495 PF00107 Zinc-binding dehydrogenase NQ528_07505 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_07505 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_07505 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_07505 PF01799 [2Fe-2S] binding domain NQ528_07510 PF00939 Sodium:sulfate symporter transmembrane region NQ528_07515 PF02779 Transketolase, pyrimidine binding domain NQ528_07515 PF02780 Transketolase, C-terminal domain NQ528_07515 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_07520 PF02779 Transketolase, pyrimidine binding domain NQ528_07520 PF02780 Transketolase, C-terminal domain NQ528_07525 PF00171 Aldehyde dehydrogenase family NQ528_07555 PF13340 Putative transposase of IS4/5 family (DUF4096) NQ528_07565 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_07580 PF00701 Dihydrodipicolinate synthetase family NQ528_07585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_07585 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_07590 PF01614 Bacterial transcriptional regulator NQ528_07590 PF09339 IclR helix-turn-helix domain NQ528_07655 PF00589 Phage integrase family NQ528_07655 PF02899 Phage integrase, N-terminal SAM-like domain NQ528_07660 PF00589 Phage integrase family NQ528_07660 PF14659 Phage integrase, N-terminal SAM-like domain NQ528_07665 PF17757 UvrB interaction domain NQ528_07665 PF02151 UvrB/uvrC motif NQ528_07665 PF04851 Type III restriction enzyme, res subunit NQ528_07665 PF00271 Helicase conserved C-terminal domain NQ528_07665 PF12344 Ultra-violet resistance protein B NQ528_07670 PF17760 UvrA interaction domain NQ528_07670 PF17755 UvrA DNA-binding domain NQ528_07675 PF00301 Rubredoxin NQ528_07680 PF00753 Metallo-beta-lactamase superfamily NQ528_07680 PF00258 Flavodoxin NQ528_07690 PF00919 Uncharacterized protein family UPF0004 NQ528_07690 PF04055 Radical SAM superfamily NQ528_07690 PF01938 TRAM domain NQ528_07700 PF01624 MutS domain I NQ528_07700 PF05188 MutS domain II NQ528_07700 PF05192 MutS domain III NQ528_07700 PF05190 MutS family domain IV NQ528_07700 PF00488 MutS domain V NQ528_07705 PF01119 DNA mismatch repair protein, C-terminal domain NQ528_07705 PF08676 MutL C terminal dimerisation domain NQ528_07715 PF17209 Hfq protein NQ528_07725 PF01168 Alanine racemase, N-terminal domain NQ528_07730 PF04472 Cell division protein SepF NQ528_07735 PF01479 S4 domain NQ528_07735 PF17774 Putative RNA-binding domain in YlmH NQ528_07745 PF08264 Anticodon-binding domain of tRNA NQ528_07745 PF00133 tRNA synthetases class I (I, L, M and V) NQ528_07745 PF06827 Zinc finger found in FPG and IleRS NQ528_07750 PF01252 Signal peptidase (SPase) II NQ528_07755 PF01479 S4 domain NQ528_07755 PF00849 RNA pseudouridylate synthase NQ528_07765 PF00999 Sodium/hydrogen exchanger family NQ528_07785 PF01078 Magnesium chelatase, subunit ChlI NQ528_07785 PF13335 Magnesium chelatase, subunit ChlI C-terminal NQ528_07790 PF02659 Putative manganese efflux pump NQ528_07795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQ528_07795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQ528_07795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQ528_07795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQ528_07805 PF01197 Ribosomal protein L31 NQ528_07810 PF00849 RNA pseudouridylate synthase NQ528_07810 PF01479 S4 domain NQ528_07815 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_07820 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_07825 PF00005 ABC transporter NQ528_07830 PF13277 YmdB-like protein NQ528_07850 PF02734 DAK2 domain NQ528_07850 PF13684 Dihydroxyacetone kinase family NQ528_07865 PF02272 DHHA1 domain NQ528_07865 PF01411 tRNA synthetases class II (A) NQ528_07865 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NQ528_07870 PF01230 HIT domain NQ528_07880 PF00152 tRNA synthetases class II (D, K and N) NQ528_07880 PF01336 OB-fold nucleic acid binding domain NQ528_07885 PF12897 Alanine-glyoxylate amino-transferase NQ528_07890 PF10397 Adenylosuccinate lyase C-terminus NQ528_07890 PF00206 Lyase NQ528_07895 PF07549 SecD/SecF GG Motif NQ528_07895 PF02355 Protein export membrane protein NQ528_07900 PF02355 Protein export membrane protein NQ528_07900 PF07549 SecD/SecF GG Motif NQ528_07910 PF03477 ATP cone domain NQ528_07940 PF07475 HPr Serine kinase C-terminal domain NQ528_07940 PF02603 HPr Serine kinase N terminus NQ528_07945 PF02811 PHP domain NQ528_07950 PF00480 ROK family NQ528_07955 PF01565 FAD binding domain NQ528_07955 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NQ528_07960 PF03668 P-loop ATPase protein family NQ528_07965 PF10298 WhiA N-terminal LAGLIDADG-like domain NQ528_07965 PF14527 WhiA LAGLIDADG-like domain NQ528_07965 PF02650 WhiA C-terminal HTH domain NQ528_07970 PF01906 Putative heavy-metal-binding NQ528_07975 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQ528_07975 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQ528_07975 PF14579 Helix-hairpin-helix motif NQ528_07975 PF02811 PHP domain NQ528_07980 PF00365 Phosphofructokinase NQ528_07985 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NQ528_07990 PF02542 YgbB family NQ528_08000 PF00266 Aminotransferase class-V NQ528_08005 PF02457 DisA bacterial checkpoint controller nucleotide-binding NQ528_08025 PF01170 Putative RNA methylase family UPF0020 NQ528_08025 PF02926 THUMP domain NQ528_08035 PF00533 BRCA1 C Terminus (BRCT) domain NQ528_08035 PF01653 NAD-dependent DNA ligase adenylation domain NQ528_08035 PF03120 NAD-dependent DNA ligase OB-fold domain NQ528_08035 PF12826 Helix-hairpin-helix motif NQ528_08035 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NQ528_08040 PF00817 impB/mucB/samB family NQ528_08040 PF11799 impB/mucB/samB family C-terminal domain NQ528_08060 PF00575 S1 RNA binding domain NQ528_08065 PF13382 Adenine deaminase C-terminal domain NQ528_08065 PF01979 Amidohydrolase family NQ528_08075 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus NQ528_08075 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NQ528_08165 PF01381 Helix-turn-helix NQ528_08225 PF00436 Single-strand binding protein family NQ528_08235 PF01695 IstB-like ATP binding protein NQ528_08375 PF13443 Cro/C1-type HTH DNA-binding domain NQ528_08445 PF01183 Glycosyl hydrolases family 25 NQ528_08445 PF01471 Putative peptidoglycan binding domain NQ528_08485 PF02075 Crossover junction endodeoxyribonuclease RuvC NQ528_08490 PF01330 RuvA N terminal domain NQ528_08490 PF07499 RuvA, C-terminal domain NQ528_08495 PF17864 RuvB AAA lid domain NQ528_08495 PF05491 RuvB C-terminal winged helix domain NQ528_08495 PF05496 Holliday junction DNA helicase RuvB P-loop domain NQ528_08500 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NQ528_08500 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NQ528_08500 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NQ528_08500 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NQ528_08505 PF01170 Putative RNA methylase family UPF0020 NQ528_08505 PF10672 S-adenosylmethionine-dependent methyltransferase NQ528_08505 PF02926 THUMP domain NQ528_08510 PF00005 ABC transporter NQ528_08515 PF00005 ABC transporter NQ528_08520 PF02361 Cobalt transport protein NQ528_08525 PF01416 tRNA pseudouridine synthase NQ528_08540 PF01066 CDP-alcohol phosphatidyltransferase NQ528_08545 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_08545 PF17871 AAA lid domain NQ528_08545 PF07724 AAA domain (Cdc48 subfamily) NQ528_08545 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_08550 PF10145 Phage-related minor tail protein NQ528_08550 PF01464 Transglycosylase SLT domain NQ528_08550 PF01551 Peptidase family M23 NQ528_08555 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_08565 PF02660 Glycerol-3-phosphate acyltransferase NQ528_08575 PF00701 Dihydrodipicolinate synthetase family NQ528_08590 PF00005 ABC transporter NQ528_08595 PF00005 ABC transporter NQ528_08595 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_08605 PF02653 Branched-chain amino acid transport system / permease component NQ528_08635 PF04542 Sigma-70 region 2 NQ528_08635 PF08281 Sigma-70, region 4 NQ528_08645 PF02237 Biotin protein ligase C terminal domain NQ528_08645 PF03099 Biotin/lipoate A/B protein ligase family NQ528_08645 PF08279 HTH domain NQ528_08650 PF00497 Bacterial extracellular solute-binding proteins, family 3 NQ528_08655 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_08660 PF00005 ABC transporter NQ528_08670 PF03062 MBOAT, membrane-bound O-acyltransferase family NQ528_08685 PF17862 AAA+ lid domain NQ528_08685 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_08685 PF06480 FtsH Extracellular NQ528_08685 PF01434 Peptidase family M41 NQ528_08690 PF00209 Sodium:neurotransmitter symporter family NQ528_08700 PF00318 Ribosomal protein S2 NQ528_08705 PF00889 Elongation factor TS NQ528_08710 PF01958 Domain of unknown function DUF108 NQ528_08710 PF03447 Homoserine dehydrogenase, NAD binding domain NQ528_08720 PF09515 Thiamine transporter protein (Thia_YuaJ) NQ528_08730 PF13247 4Fe-4S dicluster domain NQ528_08730 PF12800 4Fe-4S binding domain NQ528_08735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQ528_08735 PF00384 Molybdopterin oxidoreductase NQ528_08735 PF01568 Molydopterin dinucleotide binding domain NQ528_08740 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_08745 PF13545 Crp-like helix-turn-helix domain NQ528_08745 PF00027 Cyclic nucleotide-binding domain NQ528_08750 PF03553 Na+/H+ antiporter family NQ528_08755 PF00155 Aminotransferase class I and II NQ528_08760 PF00696 Amino acid kinase family NQ528_08765 PF01765 Ribosome recycling factor NQ528_08770 PF01255 Putative undecaprenyl diphosphate synthase NQ528_08780 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NQ528_08780 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NQ528_08780 PF13288 DXP reductoisomerase C-terminal domain NQ528_08785 PF17820 PDZ domain NQ528_08785 PF02163 Peptidase family M50 NQ528_08790 PF04551 GcpE protein NQ528_08795 PF00929 Exonuclease NQ528_08795 PF02811 PHP domain NQ528_08795 PF14579 Helix-hairpin-helix motif NQ528_08795 PF11490 DNA polymerase III polC-type N-terminus II NQ528_08795 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQ528_08795 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQ528_08800 PF13393 Histidyl-tRNA synthetase NQ528_08805 PF01634 ATP phosphoribosyltransferase NQ528_08810 PF00815 Histidinol dehydrogenase NQ528_08815 PF00155 Aminotransferase class I and II NQ528_08820 PF00475 Imidazoleglycerol-phosphate dehydratase NQ528_08825 PF00117 Glutamine amidotransferase class-I NQ528_08830 PF00977 Histidine biosynthesis protein NQ528_08835 PF00977 Histidine biosynthesis protein NQ528_08840 PF01502 Phosphoribosyl-AMP cyclohydrolase NQ528_08840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NQ528_08845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NQ528_08850 PF00696 Amino acid kinase family NQ528_08850 PF01842 ACT domain NQ528_08850 PF13840 ACT domain NQ528_08855 PF05173 Dihydrodipicolinate reductase, C-terminus NQ528_08855 PF01113 Dihydrodipicolinate reductase, N-terminus NQ528_08860 PF00701 Dihydrodipicolinate synthetase family NQ528_08865 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQ528_08865 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQ528_08870 PF02547 Queuosine biosynthesis protein NQ528_08875 PF01702 Queuine tRNA-ribosyltransferase NQ528_08880 PF02699 Preprotein translocase subunit NQ528_08905 PF02899 Phage integrase, N-terminal SAM-like domain NQ528_08905 PF00589 Phage integrase family NQ528_08910 PF00005 ABC transporter NQ528_08910 PF02687 FtsX-like permease family NQ528_08910 PF12704 MacB-like periplasmic core domain NQ528_08925 PF18073 Rubredoxin metal binding domain NQ528_08930 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_08935 PF03459 TOBE domain NQ528_08935 PF17912 MalK OB fold domain NQ528_08935 PF00005 ABC transporter NQ528_08940 PF00701 Dihydrodipicolinate synthetase family NQ528_08945 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_08950 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_08960 PF01418 Helix-turn-helix domain, rpiR family NQ528_08960 PF01380 SIS domain NQ528_08965 PF00480 ROK family NQ528_08970 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NQ528_08995 PF02915 Rubrerythrin NQ528_09000 PF00890 FAD binding domain NQ528_09000 PF02910 Fumarate reductase flavoprotein C-term NQ528_09010 PF13411 MerR HTH family regulatory protein NQ528_09015 PF00857 Isochorismatase family NQ528_09020 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NQ528_09025 PF00636 Ribonuclease III domain NQ528_09030 PF01926 50S ribosome-binding GTPase NQ528_09030 PF01018 GTP1/OBG NQ528_09030 PF09269 Domain of unknown function (DUF1967) NQ528_09035 PF01016 Ribosomal L27 protein NQ528_09040 PF00829 Ribosomal prokaryotic L21 protein NQ528_09045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NQ528_09045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NQ528_09050 PF01790 Prolipoprotein diacylglyceryl transferase NQ528_09055 PF05193 Peptidase M16 inactive domain NQ528_09055 PF00675 Insulinase (Peptidase family M16) NQ528_09065 PF10091 Putative glucoamylase NQ528_09065 PF06165 Glycosyltransferase family 36 NQ528_09065 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NQ528_09070 PF01047 MarR family NQ528_09075 PF01979 Amidohydrolase family NQ528_09080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_09085 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_09090 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_09090 PF12911 N-terminal TM domain of oligopeptide transport permease C NQ528_09095 PF00005 ABC transporter NQ528_09095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_09100 PF00005 ABC transporter NQ528_09100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_09110 PF00890 FAD binding domain NQ528_09110 PF02910 Fumarate reductase flavoprotein C-term NQ528_09120 PF02570 Precorrin-8X methylmutase NQ528_09125 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NQ528_09125 PF12557 Cob(I)alamin adenosyltransferase N terminal NQ528_09130 PF07685 CobB/CobQ-like glutamine amidotransferase domain NQ528_09135 PF00155 Aminotransferase class I and II NQ528_09140 PF03186 CobD/Cbib protein NQ528_09150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NQ528_09155 PF02654 Cobalamin-5-phosphate synthase NQ528_09160 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NQ528_09165 PF02277 Phosphoribosyltransferase NQ528_09170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NQ528_09170 PF07685 CobB/CobQ-like glutamine amidotransferase domain NQ528_09175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_09180 PF02571 Precorrin-6x reductase CbiJ/CobK NQ528_09185 PF11761 Cobalamin biosynthesis central region NQ528_09185 PF11760 Cobalamin synthesis G N-terminal NQ528_09185 PF01890 Cobalamin synthesis G C-terminus NQ528_09190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_09195 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_09200 PF01888 CbiD NQ528_09210 PF00392 Bacterial regulatory proteins, gntR family NQ528_09215 PF00005 ABC transporter NQ528_09225 PF00294 pfkB family carbohydrate kinase NQ528_09230 PF04542 Sigma-70 region 2 NQ528_09230 PF04539 Sigma-70 region 3 NQ528_09230 PF04545 Sigma-70, region 4 NQ528_09245 PF04542 Sigma-70 region 2 NQ528_09245 PF04545 Sigma-70, region 4 NQ528_09270 PF00731 AIR carboxylase NQ528_09275 PF01969 Protein of unknown function DUF111 NQ528_09285 PF00694 Aconitase C-terminal domain NQ528_09290 PF00330 Aconitase family (aconitate hydratase) NQ528_09295 PF08502 LeuA allosteric (dimerisation) domain NQ528_09295 PF00682 HMGL-like NQ528_09300 PF12822 ECF transporter, substrate-specific component NQ528_09305 PF00579 tRNA synthetases class I (W and Y) NQ528_09310 PF13476 AAA domain NQ528_09315 PF01316 Arginine repressor, DNA binding domain NQ528_09315 PF02863 Arginine repressor, C-terminal domain NQ528_09320 PF01513 ATP-NAD kinase NQ528_09325 PF01728 FtsJ-like methyltransferase NQ528_09325 PF01479 S4 domain NQ528_09330 PF02780 Transketolase, C-terminal domain NQ528_09330 PF02779 Transketolase, pyrimidine binding domain NQ528_09330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_09335 PF02681 Divergent PAP2 family NQ528_09340 PF00348 Polyprenyl synthetase NQ528_09345 PF02609 Exonuclease VII small subunit NQ528_09350 PF13742 OB-fold nucleic acid binding domain NQ528_09350 PF02601 Exonuclease VII, large subunit NQ528_09355 PF00814 Glycoprotease family NQ528_09360 PF01029 NusB family NQ528_09385 PF09546 Stage III sporulation protein AE (spore_III_AE) NQ528_09390 PF06686 Stage III sporulation protein AC/AD protein family NQ528_09395 PF06686 Stage III sporulation protein AC/AD protein family NQ528_09420 PF00501 AMP-binding enzyme NQ528_09420 PF13193 AMP-binding enzyme C-terminal domain NQ528_09430 PF13419 Haloacid dehalogenase-like hydrolase NQ528_09440 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_09440 PF17871 AAA lid domain NQ528_09440 PF07724 AAA domain (Cdc48 subfamily) NQ528_09440 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_09440 PF02861 Clp amino terminal domain, pathogenicity island component NQ528_09450 PF13416 Bacterial extracellular solute-binding protein NQ528_09455 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_09460 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_09465 PF08402 TOBE domain NQ528_09465 PF00005 ABC transporter NQ528_09475 PF00596 Class II Aldolase and Adducin N-terminal domain NQ528_09480 PF01261 Xylose isomerase-like TIM barrel NQ528_09490 PF00005 ABC transporter NQ528_09495 PF00005 ABC transporter NQ528_09495 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_09500 PF11862 Domain of unknown function (DUF3382) NQ528_09500 PF02653 Branched-chain amino acid transport system / permease component NQ528_09505 PF02653 Branched-chain amino acid transport system / permease component NQ528_09515 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NQ528_09515 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain NQ528_09515 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NQ528_09520 PF00534 Glycosyl transferases group 1 NQ528_09520 PF13439 Glycosyltransferase Family 4 NQ528_09530 PF00682 HMGL-like NQ528_09530 PF08502 LeuA allosteric (dimerisation) domain NQ528_09545 PF00155 Aminotransferase class I and II NQ528_09550 PF01678 Diaminopimelate epimerase NQ528_09575 PF03949 Malic enzyme, NAD binding domain NQ528_09575 PF00390 Malic enzyme, N-terminal domain NQ528_09580 PF02811 PHP domain NQ528_09590 PF08299 Bacterial dnaA protein helix-turn-helix NQ528_09590 PF00308 Bacterial dnaA protein NQ528_09605 PF13193 AMP-binding enzyme C-terminal domain NQ528_09605 PF00501 AMP-binding enzyme NQ528_09620 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_09625 PF02153 Prephenate dehydrogenase NQ528_09630 PF01761 3-dehydroquinate synthase NQ528_09635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQ528_09640 PF01264 Chorismate synthase NQ528_09650 PF08335 GlnD PII-uridylyltransferase NQ528_09650 PF01966 HD domain NQ528_09650 PF01909 Nucleotidyltransferase domain NQ528_09670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_09670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_09675 PF01261 Xylose isomerase-like TIM barrel NQ528_09690 PF01970 Tripartite tricarboxylate transporter TctA family NQ528_09700 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_09700 PF01842 ACT domain NQ528_09700 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_09705 PF00701 Dihydrodipicolinate synthetase family NQ528_09710 PF00356 Bacterial regulatory proteins, lacI family NQ528_09715 PF01467 Cytidylyltransferase-like NQ528_09715 PF00294 pfkB family carbohydrate kinase NQ528_09720 PF13840 ACT domain NQ528_09720 PF01842 ACT domain NQ528_09720 PF00696 Amino acid kinase family NQ528_09725 PF00288 GHMP kinases N terminal domain NQ528_09725 PF08544 GHMP kinases C terminal NQ528_09730 PF01842 ACT domain NQ528_09730 PF03447 Homoserine dehydrogenase, NAD binding domain NQ528_09730 PF00742 Homoserine dehydrogenase NQ528_09735 PF01842 ACT domain NQ528_09760 PF03459 TOBE domain NQ528_09780 PF00571 CBS domain NQ528_09780 PF00478 IMP dehydrogenase / GMP reductase domain NQ528_09795 PF00248 Aldo/keto reductase family NQ528_09810 PF00072 Response regulator receiver domain NQ528_09810 PF08769 Sporulation initiation factor Spo0A C terminal NQ528_09815 PF17820 PDZ domain NQ528_09815 PF05580 SpoIVB peptidase S55 NQ528_09835 PF03323 Bacillus/Clostridium GerA spore germination protein NQ528_09840 PF04239 Protein of unknown function (DUF421) NQ528_09855 PF00285 Citrate synthase, C-terminal domain NQ528_09860 PF00730 HhH-GPD superfamily base excision DNA repair protein NQ528_09860 PF00633 Helix-hairpin-helix motif NQ528_09860 PF14815 NUDIX domain NQ528_09890 PF01515 Phosphate acetyl/butaryl transferase NQ528_09895 PF00871 Acetokinase family NQ528_09900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_09905 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_09905 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_09915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_09920 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NQ528_09920 PF00056 lactate/malate dehydrogenase, NAD binding domain NQ528_09925 PF01546 Peptidase family M20/M25/M40 NQ528_09930 PF13085 2Fe-2S iron-sulfur cluster binding domain NQ528_09935 PF00890 FAD binding domain NQ528_09935 PF02910 Fumarate reductase flavoprotein C-term NQ528_09945 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NQ528_09945 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NQ528_09955 PF03480 Bacterial extracellular solute-binding protein, family 7 NQ528_09960 PF01614 Bacterial transcriptional regulator NQ528_09960 PF09339 IclR helix-turn-helix domain NQ528_09965 PF00209 Sodium:neurotransmitter symporter family NQ528_09975 PF03352 Methyladenine glycosylase NQ528_09980 PF01938 TRAM domain NQ528_09980 PF05958 tRNA (Uracil-5-)-methyltransferase NQ528_10000 PF12704 MacB-like periplasmic core domain NQ528_10000 PF02687 FtsX-like permease family NQ528_10010 PF01554 MatE NQ528_10035 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_10035 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_10040 PF02653 Branched-chain amino acid transport system / permease component NQ528_10045 PF00005 ABC transporter NQ528_10050 PF13407 Periplasmic binding protein domain NQ528_10065 PF03144 Elongation factor Tu domain 2 NQ528_10065 PF00009 Elongation factor Tu GTP binding domain NQ528_10065 PF16658 Class II release factor RF3, C-terminal domain NQ528_10070 PF00583 Acetyltransferase (GNAT) family NQ528_10070 PF13508 Acetyltransferase (GNAT) domain NQ528_10075 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_10075 PF07724 AAA domain (Cdc48 subfamily) NQ528_10075 PF17871 AAA lid domain NQ528_10075 PF02861 Clp amino terminal domain, pathogenicity island component NQ528_10075 PF10431 C-terminal, D2-small domain, of ClpB protein NQ528_10090 PF13419 Haloacid dehalogenase-like hydrolase NQ528_10095 PF01235 Sodium:alanine symporter family NQ528_10100 PF01817 Chorismate mutase type II NQ528_10100 PF00800 Prephenate dehydratase NQ528_10105 PF18152 DAHP synthase ferredoxin-like domain NQ528_10105 PF00793 DAHP synthetase I family NQ528_10110 PF00654 Voltage gated chloride channel NQ528_10120 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NQ528_10130 PF04542 Sigma-70 region 2 NQ528_10130 PF08281 Sigma-70, region 4 NQ528_10140 PF02844 Phosphoribosylglycinamide synthetase, N domain NQ528_10140 PF02843 Phosphoribosylglycinamide synthetase, C domain NQ528_10140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NQ528_10145 PF01808 AICARFT/IMPCHase bienzyme NQ528_10145 PF02142 MGS-like domain NQ528_10155 PF00551 Formyl transferase NQ528_10160 PF00586 AIR synthase related protein, N-terminal domain NQ528_10160 PF02769 AIR synthase related protein, C-terminal domain NQ528_10165 PF00156 Phosphoribosyl transferase domain NQ528_10170 PF01259 SAICAR synthetase NQ528_10175 PF00731 AIR carboxylase NQ528_10190 PF00664 ABC transporter transmembrane region NQ528_10190 PF00005 ABC transporter NQ528_10200 PF00375 Sodium:dicarboxylate symporter family NQ528_10205 PF03313 Serine dehydratase alpha chain NQ528_10210 PF13188 PAS domain NQ528_10210 PF02954 Bacterial regulatory protein, Fis family NQ528_10210 PF00158 Sigma-54 interaction domain NQ528_10225 PF00535 Glycosyl transferase family 2 NQ528_10230 PF03275 UDP-galactopyranose mutase NQ528_10245 PF01880 Desulfoferrodoxin NQ528_10280 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_10285 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_10295 PF00072 Response regulator receiver domain NQ528_10295 PF00486 Transcriptional regulatory protein, C terminal NQ528_10300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_10300 PF00512 His Kinase A (phospho-acceptor) domain NQ528_10315 PF03328 HpcH/HpaI aldolase/citrate lyase family NQ528_10320 PF02441 Flavoprotein NQ528_10335 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_10335 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_10340 PF04026 SpoVG NQ528_10345 PF01225 Mur ligase family, catalytic domain NQ528_10345 PF02875 Mur ligase family, glutamate ligase domain NQ528_10345 PF08245 Mur ligase middle domain NQ528_10355 PF01380 SIS domain NQ528_10360 PF01177 Asp/Glu/Hydantoin racemase NQ528_10375 PF17763 Glutaminase/Asparaginase C-terminal domain NQ528_10375 PF00710 Asparaginase, N-terminal NQ528_10380 PF00465 Iron-containing alcohol dehydrogenase NQ528_10390 PF13237 4Fe-4S dicluster domain NQ528_10390 PF00766 Electron transfer flavoprotein FAD-binding domain NQ528_10390 PF01012 Electron transfer flavoprotein domain NQ528_10395 PF01012 Electron transfer flavoprotein domain NQ528_10400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQ528_10400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQ528_10400 PF02770 Acyl-CoA dehydrogenase, middle domain NQ528_10405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NQ528_10405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NQ528_10410 PF00378 Enoyl-CoA hydratase/isomerase NQ528_10415 PF00108 Thiolase, N-terminal domain NQ528_10415 PF02803 Thiolase, C-terminal domain NQ528_10430 PF13673 Acetyltransferase (GNAT) domain NQ528_10430 PF04229 GrpB protein NQ528_10435 PF01261 Xylose isomerase-like TIM barrel NQ528_10445 PF00672 HAMP domain NQ528_10445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_10445 PF00512 His Kinase A (phospho-acceptor) domain NQ528_10445 PF00989 PAS fold NQ528_10450 PF00486 Transcriptional regulatory protein, C terminal NQ528_10450 PF00072 Response regulator receiver domain NQ528_10465 PF01084 Ribosomal protein S18 NQ528_10470 PF00436 Single-strand binding protein family NQ528_10475 PF01250 Ribosomal protein S6 NQ528_10485 PF02625 XdhC and CoxI family NQ528_10485 PF13478 XdhC Rossmann domain NQ528_10490 PF13478 XdhC Rossmann domain NQ528_10490 PF02625 XdhC and CoxI family NQ528_10500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_10500 PF03466 LysR substrate binding domain NQ528_10525 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_10525 PF13291 ACT domain NQ528_10540 PF12833 Helix-turn-helix domain NQ528_10540 PF02311 AraC-like ligand binding domain NQ528_10555 PF03313 Serine dehydratase alpha chain NQ528_10565 PF02653 Branched-chain amino acid transport system / permease component NQ528_10570 PF11862 Domain of unknown function (DUF3382) NQ528_10570 PF02653 Branched-chain amino acid transport system / permease component NQ528_10575 PF00005 ABC transporter NQ528_10575 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_10580 PF00005 ABC transporter NQ528_10585 PF02733 Dak1 domain NQ528_10590 PF02734 DAK2 domain NQ528_10595 PF02954 Bacterial regulatory protein, Fis family NQ528_10595 PF00158 Sigma-54 interaction domain NQ528_10595 PF13188 PAS domain NQ528_10605 PF01584 CheW-like domain NQ528_10605 PF00072 Response regulator receiver domain NQ528_10635 PF00708 Acylphosphatase NQ528_10640 PF03976 Polyphosphate kinase 2 (PPK2) NQ528_10645 PF01648 4'-phosphopantetheinyl transferase superfamily NQ528_10650 PF13847 Methyltransferase domain NQ528_10680 PF00005 ABC transporter NQ528_10685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) NQ528_10685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 NQ528_10710 PF01554 MatE NQ528_10715 PF00860 Permease family NQ528_10720 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_10720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_10725 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_10725 PF01799 [2Fe-2S] binding domain NQ528_10740 PF02515 CoA-transferase family III NQ528_10745 PF01425 Amidase NQ528_10750 PF01039 Carboxyl transferase domain NQ528_10755 PF07905 Purine catabolism regulatory protein-like family NQ528_10755 PF17853 GGDEF-like domain NQ528_10755 PF13556 PucR C-terminal helix-turn-helix domain NQ528_10765 PF02629 CoA binding domain NQ528_10765 PF00549 CoA-ligase NQ528_10775 PF06545 Protein of unknown function (DUF1116) NQ528_10790 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_10790 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_10795 PF00989 PAS fold NQ528_10795 PF16736 Single Cache-like NQ528_10795 PF00512 His Kinase A (phospho-acceptor) domain NQ528_10800 PF00072 Response regulator receiver domain NQ528_10800 PF00486 Transcriptional regulatory protein, C terminal NQ528_10805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NQ528_10810 PF00873 AcrB/AcrD/AcrF family NQ528_10815 PF00689 Cation transporting ATPase, C-terminus NQ528_10815 PF00690 Cation transporter/ATPase, N-terminus NQ528_10825 PF00672 HAMP domain NQ528_10825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_10825 PF02203 Tar ligand binding domain homologue NQ528_10835 PF03975 CheD chemotactic sensory transduction NQ528_10840 PF04509 CheC-like family NQ528_10845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQ528_10845 PF00460 Flagella basal body rod protein NQ528_10850 PF00460 Flagella basal body rod protein NQ528_10850 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQ528_10855 PF04542 Sigma-70 region 2 NQ528_10855 PF04539 Sigma-70 region 3 NQ528_10855 PF04545 Sigma-70, region 4 NQ528_10860 PF00771 FHIPEP family NQ528_10870 PF01311 Bacterial export proteins, family 1 NQ528_10875 PF01313 Bacterial export proteins, family 3 NQ528_10880 PF00813 FliP family NQ528_10890 PF00072 Response regulator receiver domain NQ528_10895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQ528_10895 PF04509 CheC-like family NQ528_10900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NQ528_10900 PF02154 Flagellar motor switch protein FliM NQ528_10905 PF00691 OmpA family NQ528_10905 PF13677 Membrane MotB of proton-channel complex MotA/MotB NQ528_10910 PF01618 MotA/TolQ/ExbB proton channel family NQ528_10915 PF06289 Flagellar and Swarming motility proteins NQ528_10920 PF07559 Flagellar basal body protein FlaE NQ528_10920 PF00460 Flagella basal body rod protein NQ528_10920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NQ528_10930 PF03963 Flagellar hook capping protein - N-terminal region NQ528_10945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NQ528_10945 PF02874 ATP synthase alpha/beta family, beta-barrel domain NQ528_10945 PF18269 T3SS EscN ATPase C-terminal domain NQ528_10955 PF01706 FliG C-terminal domain NQ528_10955 PF14841 FliG middle domain NQ528_10955 PF14842 FliG N-terminal domain NQ528_10965 PF02049 Flagellar hook-basal body complex protein FliE NQ528_10980 PF00460 Flagella basal body rod protein NQ528_11000 PF07195 Flagellar hook-associated protein 2 C-terminus NQ528_11000 PF07196 Flagellin hook IN motif NQ528_11000 PF02465 Flagellar hook-associated protein 2 N-terminus NQ528_11015 PF02599 Global regulator protein family NQ528_11020 PF02623 FliW protein NQ528_11030 PF00700 Bacterial flagellin C-terminal helical region NQ528_11030 PF00669 Bacterial flagellin N-terminal helical region NQ528_11050 PF13614 AAA domain NQ528_11075 PF00700 Bacterial flagellin C-terminal helical region NQ528_11075 PF00669 Bacterial flagellin N-terminal helical region NQ528_11075 PF00700 Bacterial flagellin C-terminal helical region NQ528_11075 PF00669 Bacterial flagellin N-terminal helical region NQ528_11080 PF00672 HAMP domain NQ528_11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_11080 PF02203 Tar ligand binding domain homologue NQ528_11085 PF00563 EAL domain NQ528_11085 PF08668 HDOD domain NQ528_11090 PF02491 SHS2 domain inserted in FTSA NQ528_11110 PF01584 CheW-like domain NQ528_11110 PF02895 Signal transducing histidine kinase, homodimeric domain NQ528_11110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_11110 PF01627 Hpt domain NQ528_11110 PF07194 P2 response regulator binding domain NQ528_11115 PF01584 CheW-like domain NQ528_11120 PF01739 CheR methyltransferase, SAM binding domain NQ528_11120 PF03705 CheR methyltransferase, all-alpha domain NQ528_11125 PF01339 CheB methylesterase NQ528_11125 PF00072 Response regulator receiver domain NQ528_11135 PF01139 tRNA-splicing ligase RtcB NQ528_11145 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_11150 PF00005 ABC transporter NQ528_11155 PF00356 Bacterial regulatory proteins, lacI family NQ528_11165 PF00005 ABC transporter NQ528_11170 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_11175 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_11180 PF02872 5'-nucleotidase, C-terminal domain NQ528_11180 PF00149 Calcineurin-like phosphoesterase NQ528_11185 PF00459 Inositol monophosphatase family NQ528_11190 PF13932 GidA associated domain NQ528_11190 PF01134 Glucose inhibited division protein A NQ528_11195 PF01522 Polysaccharide deacetylase NQ528_11205 PF00689 Cation transporting ATPase, C-terminus NQ528_11205 PF00690 Cation transporter/ATPase, N-terminus NQ528_11225 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_11225 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NQ528_11225 PF13247 4Fe-4S dicluster domain NQ528_11230 PF00384 Molybdopterin oxidoreductase NQ528_11230 PF01568 Molydopterin dinucleotide binding domain NQ528_11230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NQ528_11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_11235 PF14759 Reductase C-terminal NQ528_11255 PF02653 Branched-chain amino acid transport system / permease component NQ528_11260 PF02653 Branched-chain amino acid transport system / permease component NQ528_11265 PF00005 ABC transporter NQ528_11270 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_11275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NQ528_11285 PF11230 Protein of unknown function (DUF3029) NQ528_11290 PF04055 Radical SAM superfamily NQ528_11295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NQ528_11305 PF03853 YjeF-related protein N-terminus NQ528_11305 PF01256 Carbohydrate kinase NQ528_11315 PF00118 TCP-1/cpn60 chaperonin family NQ528_11320 PF00166 Chaperonin 10 Kd subunit NQ528_11325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_11325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_11330 PF12822 ECF transporter, substrate-specific component NQ528_11335 PF01226 Formate/nitrite transporter NQ528_11365 PF13407 Periplasmic binding protein domain NQ528_11370 PF02653 Branched-chain amino acid transport system / permease component NQ528_11375 PF00005 ABC transporter NQ528_11390 PF00455 DeoR C terminal sensor domain NQ528_11390 PF08220 DeoR-like helix-turn-helix domain NQ528_11400 PF03454 MoeA C-terminal region (domain IV) NQ528_11400 PF03453 MoeA N-terminal region (domain I and II) NQ528_11400 PF00994 Probable molybdopterin binding domain NQ528_11405 PF04474 Protein of unknown function (DUF554) NQ528_11410 PF12804 MobA-like NTP transferase domain NQ528_11415 PF00210 Ferritin-like domain NQ528_11420 PF01906 Putative heavy-metal-binding NQ528_11425 PF01381 Helix-turn-helix NQ528_11450 PF02743 Cache domain NQ528_11450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_11450 PF00672 HAMP domain NQ528_11460 PF02110 Hydroxyethylthiazole kinase family NQ528_11465 PF02581 Thiamine monophosphate synthase NQ528_11470 PF13419 Haloacid dehalogenase-like hydrolase NQ528_11475 PF08543 Phosphomethylpyrimidine kinase NQ528_11475 PF02581 Thiamine monophosphate synthase NQ528_11485 PF16916 Dimerisation domain of Zinc Transporter NQ528_11485 PF01545 Cation efflux family NQ528_11500 PF03176 MMPL family NQ528_11520 PF04070 Domain of unknown function (DUF378) NQ528_11530 PF00117 Glutamine amidotransferase class-I NQ528_11530 PF00958 GMP synthase C terminal domain NQ528_11530 PF02540 NAD synthase NQ528_11535 PF00005 ABC transporter NQ528_11545 PF02553 Cobalt transport protein component CbiN NQ528_11550 PF01891 Cobalt uptake substrate-specific transmembrane region NQ528_11565 PF04542 Sigma-70 region 2 NQ528_11565 PF04539 Sigma-70 region 3 NQ528_11565 PF04545 Sigma-70, region 4 NQ528_11570 PF13581 Histidine kinase-like ATPase domain NQ528_11575 PF01740 STAS domain NQ528_11580 PF02875 Mur ligase family, glutamate ligase domain NQ528_11580 PF08245 Mur ligase middle domain NQ528_11585 PF10458 Valyl tRNA synthetase tRNA binding arm NQ528_11585 PF00133 tRNA synthetases class I (I, L, M and V) NQ528_11585 PF08264 Anticodon-binding domain of tRNA NQ528_11590 PF01551 Peptidase family M23 NQ528_11590 PF10145 Phage-related minor tail protein NQ528_11590 PF01464 Transglycosylase SLT domain NQ528_11595 PF02607 B12 binding domain NQ528_11595 PF02310 B12 binding domain NQ528_11600 PF18152 DAHP synthase ferredoxin-like domain NQ528_11600 PF00793 DAHP synthetase I family NQ528_11655 PF00270 DEAD/DEAH box helicase NQ528_11655 PF13749 Putative ATP-dependent DNA helicase recG C-terminal NQ528_11655 PF17191 RecG wedge domain NQ528_11705 PF03389 MobA/MobL family NQ528_11715 PF05598 Transposase domain (DUF772) NQ528_11715 PF01609 Transposase DDE domain NQ528_11730 PF02653 Branched-chain amino acid transport system / permease component NQ528_11735 PF00005 ABC transporter NQ528_11740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_11750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NQ528_11755 PF00294 pfkB family carbohydrate kinase NQ528_11785 PF03009 Glycerophosphoryl diester phosphodiesterase family NQ528_11790 PF00288 GHMP kinases N terminal domain NQ528_11790 PF08544 GHMP kinases C terminal NQ528_11795 PF04015 Domain of unknown function (DUF362) NQ528_11800 PF01784 NIF3 (NGG1p interacting factor 3) NQ528_11825 PF08281 Sigma-70, region 4 NQ528_11825 PF04542 Sigma-70 region 2 NQ528_11830 PF01554 MatE NQ528_11835 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQ528_11840 PF08671 Anti-repressor SinI NQ528_11840 PF01381 Helix-turn-helix NQ528_11845 PF01741 Large-conductance mechanosensitive channel, MscL NQ528_11855 PF01053 Cys/Met metabolism PLP-dependent enzyme NQ528_11860 PF00291 Pyridoxal-phosphate dependent enzyme NQ528_11865 PF02082 Transcriptional regulator NQ528_11875 PF01544 CorA-like Mg2+ transporter protein NQ528_11885 PF00356 Bacterial regulatory proteins, lacI family NQ528_11895 PF02780 Transketolase, C-terminal domain NQ528_11895 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NQ528_11895 PF02779 Transketolase, pyrimidine binding domain NQ528_11900 PF02780 Transketolase, C-terminal domain NQ528_11900 PF00456 Transketolase, thiamine diphosphate binding domain NQ528_11900 PF02779 Transketolase, pyrimidine binding domain NQ528_11905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_11915 PF00571 CBS domain NQ528_11915 PF01380 SIS domain NQ528_11920 PF02653 Branched-chain amino acid transport system / permease component NQ528_11925 PF00005 ABC transporter NQ528_11930 PF00356 Bacterial regulatory proteins, lacI family NQ528_11935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NQ528_11935 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NQ528_11940 PF00294 pfkB family carbohydrate kinase NQ528_11945 PF01658 Myo-inositol-1-phosphate synthase NQ528_12040 PF02811 PHP domain NQ528_12040 PF00929 Exonuclease NQ528_12040 PF14579 Helix-hairpin-helix motif NQ528_12040 PF07733 Bacterial DNA polymerase III alpha NTPase domain NQ528_12040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NQ528_12040 PF11490 DNA polymerase III polC-type N-terminus II NQ528_12050 PF00145 C-5 cytosine-specific DNA methylase NQ528_12075 PF00436 Single-strand binding protein family NQ528_12085 PF01695 IstB-like ATP binding protein NQ528_12180 PF00574 Clp protease NQ528_12300 PF01183 Glycosyl hydrolases family 25 NQ528_12300 PF01471 Putative peptidoglycan binding domain NQ528_12315 PF01668 SmpB protein NQ528_12320 PF04138 GtrA-like protein NQ528_12325 PF02132 RecR protein NQ528_12325 PF13662 Toprim domain NQ528_12330 PF02575 YbaB/EbfC DNA-binding family NQ528_12335 PF12169 DNA polymerase III subunits gamma and tau domain III NQ528_12345 PF02645 Uncharacterised protein, DegV family COG1307 NQ528_12350 PF03717 Penicillin-binding Protein dimerisation domain NQ528_12350 PF00905 Penicillin binding protein transpeptidase domain NQ528_12355 PF01381 Helix-turn-helix NQ528_12370 PF00483 Nucleotidyl transferase NQ528_12380 PF00472 RF-1 domain NQ528_12380 PF03462 PCRF domain NQ528_12425 PF01381 Helix-turn-helix NQ528_12445 PF03932 CutC family NQ528_12460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NQ528_12460 PF01409 tRNA synthetases class II core domain (F) NQ528_12465 PF03483 B3/4 domain NQ528_12465 PF03484 tRNA synthetase B5 domain NQ528_12465 PF03147 Ferredoxin-fold anticodon binding domain NQ528_12465 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NQ528_12465 PF01588 Putative tRNA binding domain NQ528_12470 PF06135 IreB regulatory phosphoprotein NQ528_12480 PF01381 Helix-turn-helix NQ528_12485 PF00962 Adenosine/AMP deaminase NQ528_12495 PF00488 MutS domain V NQ528_12495 PF01713 Smr domain NQ528_12500 PF02565 Recombination protein O C terminal NQ528_12500 PF11967 Recombination protein O N terminal NQ528_12510 PF07650 KH domain NQ528_12510 PF01926 50S ribosome-binding GTPase NQ528_12515 PF01219 Prokaryotic diacylglycerol kinase NQ528_12520 PF02130 Uncharacterized protein family UPF0054 NQ528_12525 PF02562 PhoH-like protein NQ528_12550 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_12550 PF08239 Bacterial SH3 domain NQ528_12555 PF00209 Sodium:neurotransmitter symporter family NQ528_12560 PF01212 Beta-eliminating lyase NQ528_12565 PF01042 Endoribonuclease L-PSP NQ528_12570 PF08348 YheO-like PAS domain NQ528_12570 PF13309 HTH domain NQ528_12585 PF04073 Aminoacyl-tRNA editing domain NQ528_12595 PF14535 AMP-binding enzyme C-terminal domain NQ528_12595 PF00501 AMP-binding enzyme NQ528_12610 PF00501 AMP-binding enzyme NQ528_12610 PF14535 AMP-binding enzyme C-terminal domain NQ528_12620 PF00226 DnaJ domain NQ528_12620 PF01556 DnaJ C terminal domain NQ528_12620 PF00684 DnaJ central domain NQ528_12645 PF00809 Pterin binding enzyme NQ528_12645 PF02965 Vitamin B12 dependent methionine synthase, activation domain NQ528_12645 PF02574 Homocysteine S-methyltransferase NQ528_12645 PF02607 B12 binding domain NQ528_12645 PF02310 B12 binding domain NQ528_12650 PF02219 Methylenetetrahydrofolate reductase NQ528_12650 PF02574 Homocysteine S-methyltransferase NQ528_12660 PF00005 ABC transporter NQ528_12660 PF00664 ABC transporter transmembrane region NQ528_12665 PF00664 ABC transporter transmembrane region NQ528_12665 PF00005 ABC transporter NQ528_12690 PF00294 pfkB family carbohydrate kinase NQ528_12695 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_12695 PF17862 AAA+ lid domain NQ528_12695 PF06480 FtsH Extracellular NQ528_12695 PF01434 Peptidase family M41 NQ528_12700 PF00156 Phosphoribosyl transferase domain NQ528_12705 PF01171 PP-loop family NQ528_12705 PF11734 TilS substrate C-terminal domain NQ528_12710 PF00772 DnaB-like helicase N terminal domain NQ528_12710 PF03796 DnaB-like helicase C terminal domain NQ528_12715 PF03948 Ribosomal protein L9, C-terminal domain NQ528_12715 PF01281 Ribosomal protein L9, N-terminal domain NQ528_12720 PF01368 DHH family NQ528_12720 PF02272 DHHA1 domain NQ528_12745 PF00753 Metallo-beta-lactamase superfamily NQ528_12745 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NQ528_12745 PF17770 Ribonuclease J C-terminal domain NQ528_12750 PF00483 Nucleotidyl transferase NQ528_12755 PF00075 RNase H NQ528_12760 PF00266 Aminotransferase class-V NQ528_12765 PF01592 NifU-like N terminal domain NQ528_12790 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_12790 PF12464 Maltose acetyltransferase NQ528_12800 PF02082 Transcriptional regulator NQ528_12810 PF04539 Sigma-70 region 3 NQ528_12810 PF00140 Sigma-70 factor, region 1.2 NQ528_12810 PF03979 Sigma-70 factor, region 1.1 NQ528_12810 PF04545 Sigma-70, region 4 NQ528_12810 PF04542 Sigma-70 region 2 NQ528_12815 PF10410 DnaB-helicase binding domain of primase NQ528_12815 PF08275 DNA primase catalytic core, N-terminal domain NQ528_12815 PF01807 CHC2 zinc finger NQ528_12820 PF01966 HD domain NQ528_12820 PF13286 Phosphohydrolase-associated domain NQ528_12825 PF09186 Domain of unknown function (DUF1949) NQ528_12825 PF01205 Uncharacterized protein family UPF0029 NQ528_12830 PF01063 Amino-transferase class IV NQ528_12845 PF13673 Acetyltransferase (GNAT) domain NQ528_12850 PF13378 Enolase C-terminal domain-like NQ528_12850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NQ528_12860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NQ528_12860 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_12860 PF08501 Shikimate dehydrogenase substrate binding domain NQ528_12865 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NQ528_12865 PF07992 Pyridine nucleotide-disulphide oxidoreductase NQ528_12870 PF07729 FCD domain NQ528_12870 PF00392 Bacterial regulatory proteins, gntR family NQ528_12875 PF00072 Response regulator receiver domain NQ528_12875 PF12833 Helix-turn-helix domain NQ528_12880 PF06580 Histidine kinase NQ528_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_12880 PF00672 HAMP domain NQ528_12880 PF02743 Cache domain NQ528_12885 PF13458 Periplasmic binding protein NQ528_12890 PF02653 Branched-chain amino acid transport system / permease component NQ528_12895 PF02653 Branched-chain amino acid transport system / permease component NQ528_12895 PF11862 Domain of unknown function (DUF3382) NQ528_12900 PF00005 ABC transporter NQ528_12900 PF12399 Branched-chain amino acid ATP-binding cassette transporter NQ528_12905 PF00005 ABC transporter NQ528_12910 PF01261 Xylose isomerase-like TIM barrel NQ528_12920 PF03989 DNA gyrase C-terminal domain, beta-propeller NQ528_12920 PF00521 DNA gyrase/topoisomerase IV, subunit A NQ528_12925 PF01751 Toprim domain NQ528_12925 PF00986 DNA gyrase B subunit, carboxyl terminus NQ528_12925 PF00204 DNA gyrase B NQ528_12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_12930 PF00583 Acetyltransferase (GNAT) family NQ528_12935 PF02503 Polyphosphate kinase middle domain NQ528_12935 PF13090 Polyphosphate kinase C-terminal domain 2 NQ528_12935 PF17941 Polyphosphate kinase C-terminal domain 1 NQ528_12935 PF13089 Polyphosphate kinase N-terminal domain NQ528_12940 PF12327 FtsZ family, C-terminal domain NQ528_12940 PF00091 Tubulin/FtsZ family, GTPase domain NQ528_12950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NQ528_12955 PF03033 Glycosyltransferase family 28 N-terminal domain NQ528_12955 PF04101 Glycosyltransferase family 28 C-terminal domain NQ528_12960 PF01098 Cell cycle protein NQ528_12965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NQ528_12965 PF00953 Glycosyl transferase family 4 NQ528_12970 PF01225 Mur ligase family, catalytic domain NQ528_12970 PF02875 Mur ligase family, glutamate ligase domain NQ528_12970 PF08245 Mur ligase middle domain NQ528_12975 PF01225 Mur ligase family, catalytic domain NQ528_12975 PF02875 Mur ligase family, glutamate ligase domain NQ528_12975 PF08245 Mur ligase middle domain NQ528_12980 PF00905 Penicillin binding protein transpeptidase domain NQ528_12980 PF03793 PASTA domain NQ528_12980 PF03717 Penicillin-binding Protein dimerisation domain NQ528_12990 PF01795 MraW methylase family NQ528_12995 PF02381 MraZ protein, putative antitoxin-like NQ528_13000 PF01709 Transcriptional regulator NQ528_13005 PF01136 Peptidase family U32 NQ528_13005 PF16325 Peptidase family U32 C-terminal domain NQ528_13010 PF02618 YceG-like family NQ528_13030 PF01812 5-formyltetrahydrofolate cyclo-ligase family NQ528_13035 PF01965 DJ-1/PfpI family NQ528_13050 PF02223 Thymidylate kinase NQ528_13055 PF02511 Thymidylate synthase complementing protein NQ528_13070 PF00580 UvrD/REP helicase N-terminal domain NQ528_13070 PF13361 UvrD-like helicase C-terminal domain NQ528_13075 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NQ528_13085 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NQ528_13085 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NQ528_13090 PF00288 GHMP kinases N terminal domain NQ528_13090 PF08544 GHMP kinases C terminal NQ528_13090 PF10509 Galactokinase galactose-binding signature NQ528_13095 PF02311 AraC-like ligand binding domain NQ528_13095 PF12833 Helix-turn-helix domain NQ528_13100 PF05552 Conserved TM helix NQ528_13100 PF00924 Mechanosensitive ion channel NQ528_13125 PF00156 Phosphoribosyl transferase domain NQ528_13125 PF13537 Glutamine amidotransferase domain NQ528_13130 PF14490 Helix-hairpin-helix containing domain NQ528_13130 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NQ528_13130 PF13538 UvrD-like helicase C-terminal domain NQ528_13140 PF02773 S-adenosylmethionine synthetase, C-terminal domain NQ528_13140 PF02772 S-adenosylmethionine synthetase, central domain NQ528_13140 PF00438 S-adenosylmethionine synthetase, N-terminal domain NQ528_13145 PF01520 N-acetylmuramoyl-L-alanine amidase NQ528_13150 PF12822 ECF transporter, substrate-specific component NQ528_13155 PF00009 Elongation factor Tu GTP binding domain NQ528_13155 PF03144 Elongation factor Tu domain 2 NQ528_13155 PF03143 Elongation factor Tu C-terminal domain NQ528_13160 PF14492 Elongation Factor G, domain II NQ528_13160 PF00679 Elongation factor G C-terminus NQ528_13160 PF00009 Elongation factor Tu GTP binding domain NQ528_13160 PF03144 Elongation factor Tu domain 2 NQ528_13160 PF03764 Elongation factor G, domain IV NQ528_13165 PF00177 Ribosomal protein S7p/S5e NQ528_13170 PF00164 Ribosomal protein S12/S23 NQ528_13175 PF04998 RNA polymerase Rpb1, domain 5 NQ528_13175 PF04983 RNA polymerase Rpb1, domain 3 NQ528_13175 PF05000 RNA polymerase Rpb1, domain 4 NQ528_13175 PF04997 RNA polymerase Rpb1, domain 1 NQ528_13175 PF00623 RNA polymerase Rpb1, domain 2 NQ528_13180 PF04563 RNA polymerase beta subunit NQ528_13180 PF04560 RNA polymerase Rpb2, domain 7 NQ528_13180 PF10385 RNA polymerase beta subunit external 1 domain NQ528_13180 PF00562 RNA polymerase Rpb2, domain 6 NQ528_13180 PF04561 RNA polymerase Rpb2, domain 2 NQ528_13180 PF04565 RNA polymerase Rpb2, domain 3 NQ528_13185 PF03956 Lysine exporter LysO NQ528_13195 PF02127 Aminopeptidase I zinc metalloprotease (M18) NQ528_13200 PF01551 Peptidase family M23 NQ528_13200 PF10145 Phage-related minor tail protein NQ528_13200 PF01464 Transglycosylase SLT domain NQ528_13205 PF01121 Dephospho-CoA kinase NQ528_13210 PF03481 Putative GTP-binding controlling metal-binding NQ528_13210 PF01300 Telomere recombination NQ528_13215 PF00472 RF-1 domain NQ528_13215 PF03462 PCRF domain NQ528_13220 PF06107 Bacterial protein of unknown function (DUF951) NQ528_13225 PF00575 S1 RNA binding domain NQ528_13225 PF00013 KH domain NQ528_13225 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NQ528_13225 PF01138 3' exoribonuclease family, domain 1 NQ528_13225 PF03725 3' exoribonuclease family, domain 2 NQ528_13230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NQ528_13235 PF12002 MgsA AAA+ ATPase C terminal NQ528_13235 PF05496 Holliday junction DNA helicase RuvB P-loop domain NQ528_13235 PF16193 AAA C-terminal domain NQ528_13240 PF00464 Serine hydroxymethyltransferase NQ528_13255 PF01980 tRNA-methyltransferase O NQ528_13255 PF18389 TrmO C-terminal domain NQ528_13260 PF07883 Cupin domain NQ528_13265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_13265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_13270 PF04198 Putative sugar-binding domain NQ528_13275 PF00005 ABC transporter NQ528_13280 PF02653 Branched-chain amino acid transport system / permease component NQ528_13285 PF02653 Branched-chain amino acid transport system / permease component NQ528_13295 PF01791 DeoC/LacD family aldolase NQ528_13315 PF00294 pfkB family carbohydrate kinase NQ528_13380 PF04204 Homoserine O-succinyltransferase NQ528_13385 PF01209 ubiE/COQ5 methyltransferase family NQ528_13400 PF13941 MutL protein NQ528_13405 PF04303 PrpF protein NQ528_13410 PF02310 B12 binding domain NQ528_13415 PF00694 Aconitase C-terminal domain NQ528_13420 PF00330 Aconitase family (aconitate hydratase) NQ528_13425 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NQ528_13425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NQ528_13430 PF00111 2Fe-2S iron-sulfur cluster binding domain NQ528_13430 PF01799 [2Fe-2S] binding domain NQ528_13435 PF03450 CO dehydrogenase flavoprotein C-terminal domain NQ528_13435 PF00941 FAD binding domain in molybdopterin dehydrogenase NQ528_13440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NQ528_13440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NQ528_13455 PF00037 4Fe-4S binding domain NQ528_13460 PF01979 Amidohydrolase family NQ528_13470 PF03466 LysR substrate binding domain NQ528_13470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_13485 PF00871 Acetokinase family NQ528_13490 PF05636 HIGH Nucleotidyl Transferase NQ528_13510 PF13732 Domain of unknown function (DUF4162) NQ528_13510 PF00005 ABC transporter NQ528_13630 PF00437 Type II/IV secretion system protein NQ528_13730 PF13173 AAA domain NQ528_13730 PF13635 Domain of unknown function (DUF4143) NQ528_13775 PF00005 ABC transporter NQ528_13795 PF00072 Response regulator receiver domain NQ528_13795 PF00486 Transcriptional regulatory protein, C terminal NQ528_13805 PF00486 Transcriptional regulatory protein, C terminal NQ528_13805 PF00072 Response regulator receiver domain NQ528_13810 PF00512 His Kinase A (phospho-acceptor) domain NQ528_13810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_13815 PF00005 ABC transporter NQ528_13815 PF02687 FtsX-like permease family NQ528_13815 PF12704 MacB-like periplasmic core domain NQ528_13820 PF02687 FtsX-like permease family NQ528_13820 PF12704 MacB-like periplasmic core domain NQ528_13825 PF00005 ABC transporter NQ528_13825 PF02687 FtsX-like permease family NQ528_13825 PF12704 MacB-like periplasmic core domain NQ528_13835 PF02687 FtsX-like permease family NQ528_13835 PF12704 MacB-like periplasmic core domain NQ528_13850 PF01554 MatE NQ528_13855 PF00486 Transcriptional regulatory protein, C terminal NQ528_13855 PF00072 Response regulator receiver domain NQ528_13870 PF06908 YspA SLOG family NQ528_13910 PF00005 ABC transporter NQ528_13915 PF00512 His Kinase A (phospho-acceptor) domain NQ528_13915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_13920 PF00072 Response regulator receiver domain NQ528_13920 PF00486 Transcriptional regulatory protein, C terminal NQ528_13945 PF00533 BRCA1 C Terminus (BRCT) domain NQ528_13945 PF01653 NAD-dependent DNA ligase adenylation domain NQ528_13945 PF03120 NAD-dependent DNA ligase OB-fold domain NQ528_13945 PF12826 Helix-hairpin-helix motif NQ528_13990 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain NQ528_13990 PF14490 Helix-hairpin-helix containing domain NQ528_13990 PF13538 UvrD-like helicase C-terminal domain NQ528_13995 PF09588 YqaJ-like viral recombinase domain NQ528_14005 PF02920 DNA binding domain of tn916 integrase NQ528_14005 PF00589 Phage integrase family NQ528_14010 PF01336 OB-fold nucleic acid binding domain NQ528_14010 PF00152 tRNA synthetases class II (D, K and N) NQ528_14015 PF03449 Transcription elongation factor, N-terminal NQ528_14015 PF01272 Transcription elongation factor, GreA/GreB, C-term NQ528_14020 PF03572 Peptidase family S41 NQ528_14020 PF17820 PDZ domain NQ528_14020 PF01471 Putative peptidoglycan binding domain NQ528_14025 PF01476 LysM domain NQ528_14025 PF08525 Opacity-associated protein A N-terminal motif NQ528_14025 PF01551 Peptidase family M23 NQ528_14030 PF18075 FtsX extracellular domain NQ528_14030 PF02687 FtsX-like permease family NQ528_14035 PF00005 ABC transporter NQ528_14040 PF05651 Putative sugar diacid recognition NQ528_14040 PF13556 PucR C-terminal helix-turn-helix domain NQ528_14040 PF17853 GGDEF-like domain NQ528_14045 PF00849 RNA pseudouridylate synthase NQ528_14045 PF01479 S4 domain NQ528_14060 PF14492 Elongation Factor G, domain II NQ528_14060 PF00679 Elongation factor G C-terminus NQ528_14060 PF00009 Elongation factor Tu GTP binding domain NQ528_14060 PF03144 Elongation factor Tu domain 2 NQ528_14060 PF03764 Elongation factor G, domain IV NQ528_14070 PF00588 SpoU rRNA Methylase family NQ528_14070 PF08032 RNA 2'-O ribose methyltransferase substrate binding NQ528_14100 PF00155 Aminotransferase class I and II NQ528_14105 PF00579 tRNA synthetases class I (W and Y) NQ528_14110 PF07670 Nucleoside recognition NQ528_14115 PF07670 Nucleoside recognition NQ528_14120 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NQ528_14120 PF18277 AbrB C-terminal domain NQ528_14130 PF00180 Isocitrate/isopropylmalate dehydrogenase NQ528_14135 PF00300 Histidine phosphatase superfamily (branch 1) NQ528_14150 PF00072 Response regulator receiver domain NQ528_14150 PF00486 Transcriptional regulatory protein, C terminal NQ528_14155 PF16736 Single Cache-like NQ528_14155 PF00989 PAS fold NQ528_14155 PF00512 His Kinase A (phospho-acceptor) domain NQ528_14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_14160 PF07136 Protein of unknown function (DUF1385) NQ528_14165 PF05175 Methyltransferase small domain NQ528_14165 PF17827 PrmC N-terminal domain NQ528_14170 PF08323 Starch synthase catalytic domain NQ528_14170 PF00534 Glycosyl transferases group 1 NQ528_14175 PF00483 Nucleotidyl transferase NQ528_14180 PF00483 Nucleotidyl transferase NQ528_14180 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_14185 PF00128 Alpha amylase, catalytic domain NQ528_14185 PF02806 Alpha amylase, C-terminal all-beta domain NQ528_14185 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NQ528_14190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NQ528_14190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NQ528_14195 PF00512 His Kinase A (phospho-acceptor) domain NQ528_14195 PF00672 HAMP domain NQ528_14195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_14205 PF08264 Anticodon-binding domain of tRNA NQ528_14205 PF01588 Putative tRNA binding domain NQ528_14205 PF09334 tRNA synthetases class I (M) NQ528_14210 PF01026 TatD related DNase NQ528_14225 PF00682 HMGL-like NQ528_14230 PF07729 FCD domain NQ528_14230 PF00392 Bacterial regulatory proteins, gntR family NQ528_14245 PF09084 NMT1/THI5 like NQ528_14255 PF01568 Molydopterin dinucleotide binding domain NQ528_14255 PF00384 Molybdopterin oxidoreductase NQ528_14260 PF09547 Stage IV sporulation protein A (spore_IV_A) NQ528_14285 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin NQ528_14285 PF15714 Stage V sporulation protein T C-terminal, transcription factor NQ528_14295 PF13411 MerR HTH family regulatory protein NQ528_14300 PF01381 Helix-turn-helix NQ528_14305 PF01381 Helix-turn-helix NQ528_14310 PF01791 DeoC/LacD family aldolase NQ528_14315 PF03319 Ethanolamine utilisation protein EutN/carboxysome NQ528_14320 PF00936 BMC domain NQ528_14330 PF00936 BMC domain NQ528_14335 PF00936 BMC domain NQ528_14340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NQ528_14340 PF13237 4Fe-4S dicluster domain NQ528_14340 PF13375 RnfC Barrel sandwich hybrid domain NQ528_14340 PF10531 SLBB domain NQ528_14345 PF03319 Ethanolamine utilisation protein EutN/carboxysome NQ528_14355 PF00465 Iron-containing alcohol dehydrogenase NQ528_14365 PF00596 Class II Aldolase and Adducin N-terminal domain NQ528_14375 PF01008 Initiation factor 2 subunit family NQ528_14380 PF01636 Phosphotransferase enzyme family NQ528_14385 PF02653 Branched-chain amino acid transport system / permease component NQ528_14390 PF00005 ABC transporter NQ528_14400 PF02733 Dak1 domain NQ528_14445 PF00753 Metallo-beta-lactamase superfamily NQ528_14445 PF00258 Flavodoxin NQ528_14450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NQ528_14450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NQ528_14450 PF02770 Acyl-CoA dehydrogenase, middle domain NQ528_14485 PF16450 Proteasomal ATPase OB C-terminal domain NQ528_14485 PF00004 ATPase family associated with various cellular activities (AAA) NQ528_14485 PF17758 Proteasomal ATPase OB N-terminal domain NQ528_14630 PF00293 NUDIX domain NQ528_14630 PF09297 NADH pyrophosphatase zinc ribbon domain NQ528_14650 PF03764 Elongation factor G, domain IV NQ528_14650 PF00009 Elongation factor Tu GTP binding domain NQ528_14650 PF00679 Elongation factor G C-terminus NQ528_14650 PF14492 Elongation Factor G, domain II NQ528_14660 PF08241 Methyltransferase domain NQ528_14665 PF04542 Sigma-70 region 2 NQ528_14665 PF04539 Sigma-70 region 3 NQ528_14665 PF04545 Sigma-70, region 4 NQ528_14695 PF01695 IstB-like ATP binding protein NQ528_14720 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family NQ528_14725 PF07687 Peptidase dimerisation domain NQ528_14725 PF01546 Peptidase family M20/M25/M40 NQ528_14730 PF02653 Branched-chain amino acid transport system / permease component NQ528_14735 PF00005 ABC transporter NQ528_14740 PF13407 Periplasmic binding protein domain NQ528_14750 PF00356 Bacterial regulatory proteins, lacI family NQ528_14765 PF00465 Iron-containing alcohol dehydrogenase NQ528_14810 PF02384 N-6 DNA Methylase NQ528_14890 PF13408 Recombinase zinc beta ribbon domain NQ528_14890 PF00239 Resolvase, N terminal domain NQ528_14890 PF07508 Recombinase NQ528_14900 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system NQ528_14960 PF01139 tRNA-splicing ligase RtcB NQ528_14985 PF03691 Uncharacterised protein family (UPF0167) NQ528_15235 PF04225 Opacity-associated protein A LysM-like domain NQ528_15235 PF01551 Peptidase family M23 NQ528_15340 PF00437 Type II/IV secretion system protein NQ528_15370 PF04026 SpoVG NQ528_15475 PF00085 Thioredoxin NQ528_15485 PF00269 Small, acid-soluble spore proteins, alpha/beta type NQ528_15490 PF00005 ABC transporter NQ528_15490 PF17845 FbpC C-terminal regulatory nucleotide binding domain NQ528_15495 PF00528 Binding-protein-dependent transport system inner membrane component NQ528_15530 PF01263 Aldose 1-epimerase NQ528_15540 PF03193 RsgA GTPase NQ528_15540 PF16745 RsgA N-terminal domain NQ528_15545 PF03793 PASTA domain NQ528_15545 PF00069 Protein kinase domain NQ528_15555 PF04055 Radical SAM superfamily NQ528_15560 PF01029 NusB family NQ528_15560 PF01189 16S rRNA methyltransferase RsmB/F NQ528_15565 PF04298 Putative neutral zinc metallopeptidase NQ528_15570 PF02911 Formyl transferase, C-terminal domain NQ528_15570 PF00551 Formyl transferase NQ528_15575 PF01327 Polypeptide deformylase NQ528_15580 PF04851 Type III restriction enzyme, res subunit NQ528_15580 PF18074 Primosomal protein N C-terminal domain NQ528_15580 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NQ528_15580 PF00271 Helicase conserved C-terminal domain NQ528_15580 PF17764 3′ DNA-binding domain (3′BD) NQ528_15585 PF00302 Chloramphenicol acetyltransferase NQ528_15590 PF04127 DNA / pantothenate metabolism flavoprotein NQ528_15590 PF02441 Flavoprotein NQ528_15595 PF01192 RNA polymerase Rpb6 NQ528_15600 PF00625 Guanylate kinase NQ528_15605 PF04025 Domain of unknown function (DUF370) NQ528_15610 PF03755 YicC-like family, N-terminal region NQ528_15610 PF08340 Domain of unknown function (DUF1732) NQ528_15615 PF00364 Biotin-requiring enzyme NQ528_15615 PF00682 HMGL-like NQ528_15615 PF02436 Conserved carboxylase domain NQ528_15620 PF00364 Biotin-requiring enzyme NQ528_15625 PF01039 Carboxyl transferase domain NQ528_15635 PF00849 RNA pseudouridylate synthase NQ528_15635 PF01479 S4 domain NQ528_15640 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_15640 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_15645 PF09579 Sporulation protein YtfJ (Spore_YtfJ) NQ528_15655 PF04079 Segregation and condensation complex subunit ScpB NQ528_15660 PF02616 Segregation and condensation protein ScpA NQ528_15665 PF02163 Peptidase family M50 NQ528_15670 PF00830 Ribosomal L28 family NQ528_15680 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NQ528_15680 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NQ528_15685 PF02660 Glycerol-3-phosphate acyltransferase NQ528_15690 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NQ528_15690 PF01926 50S ribosome-binding GTPase NQ528_15700 PF01783 Ribosomal L32p protein family NQ528_15715 PF00342 Phosphoglucose isomerase NQ528_15720 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_15720 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_15735 PF00919 Uncharacterized protein family UPF0004 NQ528_15735 PF04055 Radical SAM superfamily NQ528_15735 PF01938 TRAM domain NQ528_15740 PF00586 AIR synthase related protein, N-terminal domain NQ528_15740 PF02769 AIR synthase related protein, C-terminal domain NQ528_15740 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NQ528_15755 PF00072 Response regulator receiver domain NQ528_15765 PF01053 Cys/Met metabolism PLP-dependent enzyme NQ528_15770 PF00768 D-alanyl-D-alanine carboxypeptidase NQ528_15770 PF07943 Penicillin-binding protein 5, C-terminal domain NQ528_15780 PF00440 Bacterial regulatory proteins, tetR family NQ528_15785 PF00664 ABC transporter transmembrane region NQ528_15785 PF00005 ABC transporter NQ528_15790 PF00664 ABC transporter transmembrane region NQ528_15790 PF00005 ABC transporter NQ528_15795 PF00542 Ribosomal protein L7/L12 C-terminal domain NQ528_15795 PF16320 Ribosomal protein L7/L12 dimerisation domain NQ528_15800 PF00466 Ribosomal protein L10 NQ528_15805 PF00687 Ribosomal protein L1p/L10e family NQ528_15810 PF00298 Ribosomal protein L11, RNA binding domain NQ528_15810 PF03946 Ribosomal protein L11, N-terminal domain NQ528_15815 PF00467 KOW motif NQ528_15815 PF02357 Transcription termination factor nusG NQ528_15820 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NQ528_15825 PF00471 Ribosomal protein L33 NQ528_15835 PF01820 D-ala D-ala ligase N-terminus NQ528_15835 PF07478 D-ala D-ala ligase C-terminus NQ528_15840 PF01177 Asp/Glu/Hydantoin racemase NQ528_15850 PF05746 DALR anticodon binding domain NQ528_15850 PF00750 tRNA synthetases class I (R) NQ528_15850 PF03485 Arginyl tRNA synthetase N terminal domain NQ528_15855 PF02574 Homocysteine S-methyltransferase NQ528_15855 PF02219 Methylenetetrahydrofolate reductase NQ528_15860 PF00301 Rubredoxin NQ528_15860 PF01613 Flavin reductase like domain NQ528_15865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NQ528_15865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NQ528_15875 PF03461 TRCF domain NQ528_15875 PF17757 UvrB interaction domain NQ528_15875 PF02559 CarD-like/TRCF domain NQ528_15875 PF00270 DEAD/DEAH box helicase NQ528_15875 PF00271 Helicase conserved C-terminal domain NQ528_15880 PF01195 Peptidyl-tRNA hydrolase NQ528_15885 PF14572 Phosphoribosyl synthetase-associated domain NQ528_15885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NQ528_15890 PF00132 Bacterial transferase hexapeptide (six repeats) NQ528_15890 PF12804 MobA-like NTP transferase domain NQ528_15895 PF00391 PEP-utilising enzyme, mobile domain NQ528_15895 PF02896 PEP-utilising enzyme, TIM barrel domain NQ528_15895 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NQ528_15905 PF01098 Cell cycle protein NQ528_15910 PF01268 Formate--tetrahydrofolate ligase NQ528_15915 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NQ528_15920 PF00814 Glycoprotease family NQ528_15925 PF02502 Ribose/Galactose Isomerase NQ528_15960 PF18146 Damage-inducible protein CinA KH domain NQ528_15960 PF02464 Competence-damaged protein NQ528_15960 PF00994 Probable molybdopterin binding domain NQ528_15970 PF02926 THUMP domain NQ528_15970 PF02568 Thiamine biosynthesis protein (ThiI) NQ528_15975 PF00266 Aminotransferase class-V NQ528_15980 PF03413 Peptidase propeptide and YPEB domain NQ528_15980 PF14620 YpeB sporulation NQ528_15990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQ528_16015 PF00664 ABC transporter transmembrane region NQ528_16015 PF00005 ABC transporter NQ528_16020 PF00005 ABC transporter NQ528_16020 PF00664 ABC transporter transmembrane region NQ528_16025 PF14310 Fibronectin type III-like domain NQ528_16025 PF00933 Glycosyl hydrolase family 3 N terminal domain NQ528_16025 PF01915 Glycosyl hydrolase family 3 C-terminal domain NQ528_16025 PF07691 PA14 domain NQ528_16030 PF02653 Branched-chain amino acid transport system / permease component NQ528_16035 PF02653 Branched-chain amino acid transport system / permease component NQ528_16040 PF00005 ABC transporter NQ528_16045 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_16050 PF00356 Bacterial regulatory proteins, lacI family NQ528_16060 PF02653 Branched-chain amino acid transport system / permease component NQ528_16065 PF00005 ABC transporter NQ528_16070 PF00005 ABC transporter NQ528_16070 PF08402 TOBE domain NQ528_16075 PF02743 Cache domain NQ528_16075 PF00672 HAMP domain NQ528_16075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NQ528_16075 PF06580 Histidine kinase NQ528_16080 PF12833 Helix-turn-helix domain NQ528_16080 PF00072 Response regulator receiver domain NQ528_16085 PF13580 SIS domain NQ528_16090 PF01325 Iron dependent repressor, N-terminal DNA binding domain NQ528_16090 PF00480 ROK family NQ528_16100 PF00294 pfkB family carbohydrate kinase NQ528_16100 PF01467 Cytidylyltransferase-like NQ528_16110 PF01325 Iron dependent repressor, N-terminal DNA binding domain NQ528_16110 PF00480 ROK family NQ528_16115 PF00480 ROK family NQ528_16120 PF01238 Phosphomannose isomerase type I NQ528_16130 PF07702 UTRA domain NQ528_16130 PF00392 Bacterial regulatory proteins, gntR family NQ528_16135 PF02608 ABC transporter substrate-binding protein PnrA-like NQ528_16145 PF02653 Branched-chain amino acid transport system / permease component NQ528_16150 PF00005 ABC transporter NQ528_16160 PF01008 Initiation factor 2 subunit family NQ528_16165 PF11230 Protein of unknown function (DUF3029) NQ528_16170 PF00672 HAMP domain NQ528_16170 PF02743 Cache domain NQ528_16170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_16175 PF01418 Helix-turn-helix domain, rpiR family NQ528_16175 PF01380 SIS domain NQ528_16180 PF02502 Ribose/Galactose Isomerase NQ528_16185 PF00121 Triosephosphate isomerase NQ528_16195 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_16195 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_16210 PF02733 Dak1 domain NQ528_16215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NQ528_16215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NQ528_16225 PF02653 Branched-chain amino acid transport system / permease component NQ528_16235 PF02653 Branched-chain amino acid transport system / permease component NQ528_16240 PF00005 ABC transporter NQ528_16265 PF00380 Ribosomal protein S9/S16 NQ528_16270 PF00572 Ribosomal protein L13 NQ528_16280 PF01381 Helix-turn-helix NQ528_16285 PF17785 PUA-like domain NQ528_16285 PF10672 S-adenosylmethionine-dependent methyltransferase NQ528_16295 PF00152 tRNA synthetases class II (D, K and N) NQ528_16295 PF02938 GAD domain NQ528_16295 PF01336 OB-fold nucleic acid binding domain NQ528_16300 PF03129 Anticodon binding domain NQ528_16300 PF13393 Histidyl-tRNA synthetase NQ528_16305 PF02142 MGS-like domain NQ528_16310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NQ528_16315 PF00905 Penicillin binding protein transpeptidase domain NQ528_16335 PF02545 Maf-like protein NQ528_16345 PF00692 dUTPase NQ528_16350 PF12392 Collagenase NQ528_16350 PF01136 Peptidase family U32 NQ528_16355 PF05164 Cell division protein ZapA NQ528_16360 PF00343 Carbohydrate phosphorylase NQ528_16365 PF00128 Alpha amylase, catalytic domain NQ528_16365 PF02903 Alpha amylase, N-terminal ig-like domain NQ528_16370 PF00005 ABC transporter NQ528_16370 PF02687 FtsX-like permease family NQ528_16370 PF12704 MacB-like periplasmic core domain NQ528_16385 PF01183 Glycosyl hydrolases family 25 NQ528_16390 PF04055 Radical SAM superfamily NQ528_16400 PF03477 ATP cone domain NQ528_16400 PF13597 Anaerobic ribonucleoside-triphosphate reductase NQ528_16405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NQ528_16410 PF00005 ABC transporter NQ528_16410 PF12848 ABC transporter NQ528_16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NQ528_16425 PF03466 LysR substrate binding domain NQ528_16430 PF08240 Alcohol dehydrogenase GroES-like domain NQ528_16430 PF00107 Zinc-binding dehydrogenase NQ528_16435 PF01645 Conserved region in glutamate synthase NQ528_16440 PF01475 Ferric uptake regulator family NQ528_16445 PF00589 Phage integrase family NQ528_16445 PF02899 Phage integrase, N-terminal SAM-like domain NQ528_16450 PF01212 Beta-eliminating lyase NQ528_16455 PF00209 Sodium:neurotransmitter symporter family NQ528_16480 PF01554 MatE NQ528_16485 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NQ528_16490 PF00005 ABC transporter NQ528_16490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NQ528_16495 PF00005 ABC transporter NQ528_16500 PF00392 Bacterial regulatory proteins, gntR family NQ528_16500 PF07702 UTRA domain NQ528_16510 PF02653 Branched-chain amino acid transport system / permease component NQ528_16515 PF00005 ABC transporter NQ528_16520 PF13407 Periplasmic binding protein domain NQ528_16525 PF01979 Amidohydrolase family NQ528_16530 PF02633 Creatinine amidohydrolase NQ528_16540 PF01979 Amidohydrolase family NQ528_16555 PF00294 pfkB family carbohydrate kinase NQ528_16580 PF07702 UTRA domain NQ528_16580 PF00392 Bacterial regulatory proteins, gntR family NQ528_16590 PF06838 Methionine gamma-lyase NQ528_16600 PF05343 M42 glutamyl aminopeptidase NQ528_16605 PF05343 M42 glutamyl aminopeptidase NQ528_16610 PF08245 Mur ligase middle domain NQ528_16625 PF00009 Elongation factor Tu GTP binding domain NQ528_16625 PF03144 Elongation factor Tu domain 2 NQ528_16625 PF06421 GTP-binding protein LepA C-terminus NQ528_16625 PF00679 Elongation factor G C-terminus NQ528_16635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NQ528_16640 PF06949 Protein of unknown function (DUF1292) NQ528_16660 PF00694 Aconitase C-terminal domain NQ528_16660 PF00330 Aconitase family (aconitate hydratase) NQ528_16680 PF01554 MatE NQ528_16730 PF04865 Baseplate J-like protein NQ528_16735 PF10934 Protein of unknown function (DUF2634) NQ528_16770 PF09393 Phage tail tube protein NQ528_16775 PF04984 Phage tail sheath protein subtilisin-like domain NQ528_16775 PF17482 Phage tail sheath C-terminal domain NQ528_16775 PF17481 Phage tail sheath protein beta-sandwich domain NQ528_16790 PF01381 Helix-turn-helix NQ528_16810 PF02203 Tar ligand binding domain homologue NQ528_16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NQ528_16810 PF00672 HAMP domain NQ528_16815 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NQ528_16820 PF16921 Tex protein YqgF-like domain NQ528_16820 PF09371 Tex-like protein N-terminal domain NQ528_16820 PF00575 S1 RNA binding domain NQ528_16820 PF17674 HHH domain NQ528_16825 PF04055 Radical SAM superfamily NQ528_16825 PF02310 B12 binding domain NQ528_16840 PF00535 Glycosyl transferase family 2 NQ528_16845 PF00899 ThiF family NQ528_16850 PF01171 PP-loop family NQ528_16855 PF03471 Transporter associated domain NQ528_16855 PF00571 CBS domain NQ528_16860 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NQ528_16860 PF10371 Domain of unknown function NQ528_16860 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NQ528_16860 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NQ528_16860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_16870 PF12437 Glutamine synthetase type III N terminal NQ528_16870 PF00120 Glutamine synthetase, catalytic domain NQ528_16870 PF18318 Glutamine synthetase C-terminal domain NQ528_16875 PF03590 Aspartate-ammonia ligase NQ528_16885 PF06969 HemN C-terminal domain NQ528_16885 PF04055 Radical SAM superfamily NQ528_16895 PF00842 Alanine racemase, C-terminal domain NQ528_16895 PF01168 Alanine racemase, N-terminal domain NQ528_16905 PF03418 Germination protease NQ528_16920 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NQ528_16920 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQ528_16925 PF00749 tRNA synthetases class I (E and Q), catalytic domain NQ528_16930 PF03652 Holliday junction resolvase NQ528_16945 PF01196 Ribosomal protein L17 NQ528_16950 PF01000 RNA polymerase Rpb3/RpoA insert domain NQ528_16950 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NQ528_16950 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NQ528_16955 PF00163 Ribosomal protein S4/S9 N-terminal domain NQ528_16955 PF01479 S4 domain NQ528_16960 PF00411 Ribosomal protein S11 NQ528_16965 PF00416 Ribosomal protein S13/S18 NQ528_16970 PF00444 Ribosomal protein L36 NQ528_16975 PF01176 Translation initiation factor 1A / IF-1 NQ528_16985 PF00557 Metallopeptidase family M24 NQ528_16990 PF05191 Adenylate kinase, active site lid NQ528_16995 PF00344 SecY translocase NQ528_17000 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NQ528_17005 PF00327 Ribosomal protein L30p/L7e NQ528_17010 PF00333 Ribosomal protein S5, N-terminal domain NQ528_17010 PF03719 Ribosomal protein S5, C-terminal domain NQ528_17015 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NQ528_17020 PF00347 Ribosomal protein L6 NQ528_17025 PF00410 Ribosomal protein S8 NQ528_17030 PF00253 Ribosomal protein S14p/S29e NQ528_17035 PF00673 ribosomal L5P family C-terminus NQ528_17035 PF00281 Ribosomal protein L5 NQ528_17040 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NQ528_17040 PF00467 KOW motif NQ528_17045 PF00238 Ribosomal protein L14p/L23e NQ528_17050 PF00366 Ribosomal protein S17 NQ528_17055 PF00831 Ribosomal L29 protein NQ528_17060 PF00252 Ribosomal protein L16p/L10e NQ528_17065 PF07650 KH domain NQ528_17065 PF00189 Ribosomal protein S3, C-terminal domain NQ528_17070 PF00237 Ribosomal protein L22p/L17e NQ528_17075 PF00203 Ribosomal protein S19 NQ528_17080 PF00181 Ribosomal Proteins L2, RNA binding domain NQ528_17080 PF03947 Ribosomal Proteins L2, C-terminal domain NQ528_17085 PF00276 Ribosomal protein L23 NQ528_17090 PF00573 Ribosomal protein L4/L1 family NQ528_17095 PF00297 Ribosomal protein L3 NQ528_17100 PF00338 Ribosomal protein S10p/S20e NQ528_17110 PF09180 Prolyl-tRNA synthetase, C-terminal NQ528_17110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_17110 PF03129 Anticodon binding domain NQ528_17115 PF01027 Inhibitor of apoptosis-promoting Bax1 NQ528_17120 PF00550 Phosphopantetheine attachment site NQ528_17125 PF07977 FabA-like domain NQ528_17130 PF02801 Beta-ketoacyl synthase, C-terminal domain NQ528_17130 PF00109 Beta-ketoacyl synthase, N-terminal domain NQ528_17140 PF03060 Nitronate monooxygenase NQ528_17145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NQ528_17145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NQ528_17150 PF00698 Acyl transferase domain NQ528_17155 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NQ528_17155 PF01488 Shikimate / quinate 5-dehydrogenase NQ528_17155 PF08501 Shikimate dehydrogenase substrate binding domain NQ528_17160 PF01202 Shikimate kinase NQ528_17170 PF02915 Rubrerythrin NQ528_17180 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NQ528_17180 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NQ528_17185 PF00814 Glycoprotease family NQ528_17190 PF00583 Acetyltransferase (GNAT) family NQ528_17195 PF00476 DNA polymerase family A NQ528_17195 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NQ528_17195 PF01367 5'-3' exonuclease, C-terminal SAM fold NQ528_17200 PF01207 Dihydrouridine synthase (Dus) NQ528_17205 PF02390 Putative methyltransferase NQ528_17210 PF10369 Small subunit of acetolactate synthase NQ528_17215 PF00205 Thiamine pyrophosphate enzyme, central domain NQ528_17215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NQ528_17215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NQ528_17225 PF01497 Periplasmic binding protein NQ528_17230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NQ528_17230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NQ528_17235 PF00202 Aminotransferase class-III NQ528_17240 PF00696 Amino acid kinase family NQ528_17245 PF01960 ArgJ family NQ528_17250 PF01118 Semialdehyde dehydrogenase, NAD binding domain NQ528_17250 PF02774 Semialdehyde dehydrogenase, dimerisation domain NQ528_17255 PF14698 Argininosuccinate lyase C-terminal NQ528_17255 PF00206 Lyase NQ528_17260 PF00764 Arginosuccinate synthase NQ528_17270 PF16360 GTP-binding GTPase Middle Region NQ528_17270 PF13167 GTP-binding GTPase N-terminal NQ528_17270 PF01926 50S ribosome-binding GTPase NQ528_17280 PF01145 SPFH domain / Band 7 family NQ528_17290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NQ528_17290 PF01842 ACT domain NQ528_17290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NQ528_17295 PF00266 Aminotransferase class-V NQ528_17300 PF00005 ABC transporter NQ528_17325 PF01726 LexA DNA binding domain NQ528_17325 PF00717 Peptidase S24-like NQ528_17390 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NQ528_17395 PF02554 Carbon starvation protein CstA NQ528_17420 PF00465 Iron-containing alcohol dehydrogenase NQ528_17430 PF02867 Ribonucleotide reductase, barrel domain NQ528_17430 PF03477 ATP cone domain NQ528_17430 PF00317 Ribonucleotide reductase, all-alpha domain NQ528_17440 PF00356 Bacterial regulatory proteins, lacI family NQ528_17445 PF01180 Dihydroorotate dehydrogenase NQ528_17450 PF00860 Permease family NQ528_17460 PF00795 Carbon-nitrogen hydrolase NQ528_17465 PF07969 Amidohydrolase family NQ528_17475 PF08543 Phosphomethylpyrimidine kinase NQ528_17485 PF02386 Cation transport protein NQ528_17490 PF00293 NUDIX domain NQ528_17490 PF13344 Haloacid dehalogenase-like hydrolase NQ528_17510 PF02583 Metal-sensitive transcriptional repressor NQ528_17535 PF07728 AAA domain (dynein-related subfamily) NQ528_17545 PF05762 VWA domain containing CoxE-like protein NQ528_17565 PF00403 Heavy-metal-associated domain NQ528_17570 PF00403 Heavy-metal-associated domain NQ528_17575 PF01022 Bacterial regulatory protein, arsR family NQ528_17590 PF00343 Carbohydrate phosphorylase NQ528_17595 PF02446 4-alpha-glucanotransferase NQ528_17600 PF12850 Calcineurin-like phosphoesterase superfamily domain NQ528_17620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NQ528_17630 PF05175 Methyltransferase small domain NQ528_17635 PF12838 4Fe-4S dicluster domain NQ528_17640 PF04468 PSP1 C-terminal conserved region NQ528_17650 PF06153 Cyclic-di-AMP receptor NQ528_17655 PF01276 Orn/Lys/Arg decarboxylase, major domain NQ528_17655 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NQ528_17675 PF02254 TrkA-N domain NQ528_17675 PF02080 TrkA-C domain NQ528_17695 PF12848 ABC transporter NQ528_17695 PF00005 ABC transporter NQ528_17700 PF01790 Prolipoprotein diacylglyceryl transferase NQ528_17740 PF01471 Putative peptidoglycan binding domain NQ528_17740 PF07486 Cell Wall Hydrolase NQ528_17765 PF00535 Glycosyl transferase family 2 NQ528_17770 PF00535 Glycosyl transferase family 2 NQ528_17800 PF00535 Glycosyl transferase family 2 NQ528_17805 PF00005 ABC transporter NQ528_17810 PF01061 ABC-2 type transporter NQ528_17815 PF04321 RmlD substrate binding domain NQ528_17820 PF00535 Glycosyl transferase family 2 NQ528_17825 PF16363 GDP-mannose 4,6 dehydratase NQ528_17830 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NQ528_17835 PF00483 Nucleotidyl transferase NQ528_17840 PF13439 Glycosyltransferase Family 4 NQ528_17840 PF00534 Glycosyl transferases group 1 NQ528_17845 PF02397 Bacterial sugar transferase NQ528_17865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NQ528_17865 PF02403 Seryl-tRNA synthetase N-terminal domain NQ528_17870 PF02195 ParB-like nuclease domain NQ528_17870 PF17762 HTH domain found in ParB protein NQ528_17875 PF13614 AAA domain NQ528_17880 PF17762 HTH domain found in ParB protein NQ528_17880 PF02195 ParB-like nuclease domain NQ528_17885 PF02527 rRNA small subunit methyltransferase G NQ528_17890 PF01134 Glucose inhibited division protein A NQ528_17890 PF13932 GidA associated domain NQ528_17895 PF01926 50S ribosome-binding GTPase NQ528_17895 PF12631 MnmE helical domain NQ528_17895 PF10396 GTP-binding protein TrmE N-terminus NQ528_17900 PF14804 Jag N-terminus NQ528_17900 PF01424 R3H domain NQ528_17905 PF02096 60Kd inner membrane protein NQ528_17910 PF01809 Putative membrane protein insertion efficiency factor NQ528_17915 PF00825 Ribonuclease P NQ528_17920 PF00468 Ribosomal protein L34