AMF_001 SM01001 AIR carboxylase AMF_006 SM00411 bacterial (prokaryotic) histone like domain AMF_007 SM00422 helix_turn_helix, mercury resistance AMF_019 SM00382 ATPases associated with a variety of cellular activities AMF_020 SM00919 Malic enzyme, NAD binding domain AMF_020 SM01274 AMF_020 AMF_045 SM00357 Cold shock protein domain AMF_045 SM00382 ATPases associated with a variety of cellular activities AMF_045 SM00959 Rho termination factor, N-terminal domain AMF_061 SM00382 ATPases associated with a variety of cellular activities AMF_073 SM00116 Domain in cystathionine beta-synthase and other proteins. AMF_073 SM01240 AMF_073 AMF_077 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMF_080 SM00978 AMF_080 AMF_091 SM00487 DEAD-like helicases superfamily AMF_091 SM00490 helicase superfamily c-terminal domain AMF_091 SM00982 AMF_091 AMF_091 SM01058 CarD-like/TRCF domain AMF_1012 SM00487 DEAD-like helicases superfamily AMF_1012 SM00490 helicase superfamily c-terminal domain AMF_1025 SM00861 Transketolase, pyrimidine binding domain AMF_1041 SM00411 bacterial (prokaryotic) histone like domain AMF_105 SM00382 ATPases associated with a variety of cellular activities AMF_109 SM00357 Cold shock protein domain AMF_110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMF_110 SM00387 Histidine kinase-like ATPases AMF_110 SM00388 His Kinase A (phosphoacceptor) domain AMF_111 SM00474 3'-5' exonuclease AMF_112 SM00292 breast cancer carboxy-terminal domain AMF_112 SM00532 Ligase N family AMF_116 SM00382 ATPases associated with a variety of cellular activities AMF_123 SM01219 AMF_123 AMF_124 SM00382 ATPases associated with a variety of cellular activities AMF_129 SM00382 ATPases associated with a variety of cellular activities AMF_132 SM00072 Guanylate kinase homologues. AMF_149 SM00749 bacterial OsmY and nodulation domain AMF_153 SM00382 ATPases associated with a variety of cellular activities AMF_153 SM00448 cheY-homologous receiver domain AMF_161 SM00849 Metallo-beta-lactamase superfamily AMF_162 SM01230 AMF_162 AMF_164 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMF_167 SM00881 CoA binding domain AMF_179 SM00849 Metallo-beta-lactamase superfamily AMF_185 SM00838 Elongation factor G C-terminus AMF_185 SM00889 Elongation factor G, domain IV AMF_188 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMF_190 SM00649 Ribosomal protein L11/L12 AMF_195 SM00663 RNA polymerase I subunit A N-terminus AMF_213 SM00481 DNA polymerase alpha chain like domain AMF_223 SM00363 S4 RNA-binding domain AMF_223 SM01390 AMF_223 AMF_231 SM00382 ATPases associated with a variety of cellular activities AMF_231 SM00994 ClpX C4-type zinc finger AMF_231 SM01086 C-terminal, D2-small domain, of ClpB protein AMF_232 SM00382 ATPases associated with a variety of cellular activities AMF_232 SM00464 Found in ATP-dependent protease La (LON) AMF_234 SM00450 Rhodanese Homology Domain AMF_237 SM01091 Transporter associated domain AMF_240 SM00843 AMF_240 AMF_244 SM00387 Histidine kinase-like ATPases AMF_244 SM00388 His Kinase A (phosphoacceptor) domain AMF_248 SM00853 MutL C terminal dimerisation domain AMF_248 SM01340 AMF_248 AMF_252 SM00825 Beta-ketoacyl synthase AMF_273 SM00434 DNA Topoisomerase IV AMF_274 SM00478 endonuclease III AMF_274 SM00525 AMF_274 AMF_276 SM00387 Histidine kinase-like ATPases AMF_279 SM00998 Adenylosuccinate lyase C-terminus AMF_280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMF_280 SM00465 GIY-YIG type nucleases (URI domain) AMF_285 SM00382 ATPases associated with a variety of cellular activities AMF_286 SM00493 AMF_286 AMF_288 SM00382 ATPases associated with a variety of cellular activities AMF_291 SM00729 Elongator protein 3, MiaB family, Radical SAM AMF_295 SM00861 Transketolase, pyrimidine binding domain AMF_297 SM01130 AMF_297 AMF_301 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMF_301 SM00534 ATPase domain of DNA mismatch repair MUTS family AMF_306 SM01004 Delta-aminolevulinic acid dehydratase AMF_312 SM00845 GatB domain AMF_314 SM00382 ATPases associated with a variety of cellular activities AMF_314 SM00760 Bacterial dnaA protein helix-turn-helix domain AMF_324 SM01409 AMF_324 AMF_329 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMF_345 SM00841 Elongation factor P, C-terminal AMF_345 SM01185 AMF_345 AMF_347 SM00363 S4 RNA-binding domain AMF_349 SM00267 diguanylate cyclase AMF_349 SM00448 cheY-homologous receiver domain AMF_354 SM00840 AMF_354 AMF_361 SM00400 zinc finger AMF_361 SM00493 AMF_361 AMF_369 SM00387 Histidine kinase-like ATPases AMF_369 SM00388 His Kinase A (phosphoacceptor) domain AMF_369 SM00448 cheY-homologous receiver domain AMF_373 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMF_373 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMF_373 SM00493 AMF_373 AMF_390 SM01387 AMF_390 AMF_391 SM00316 Ribosomal protein S1-like RNA-binding domain AMF_391 SM00322 K homology RNA-binding domain AMF_393 SM00838 Elongation factor G C-terminus AMF_415 SM00650 Ribosomal RNA adenine dimethylases AMF_420 SM00905 Dihydroneopterin aldolase AMF_436 SM00822 AMF_436 AMF_448 SM01192 AMF_448 AMF_448 SM01193 AMF_448 AMF_467 SM00479 AMF_467 AMF_468 SM00382 ATPases associated with a variety of cellular activities AMF_476 SM00248 ankyrin repeats AMF_478 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMF_480 SM00387 Histidine kinase-like ATPases AMF_480 SM00433 TopoisomeraseII AMF_486 SM00271 DnaJ molecular chaperone homology domain AMF_500 SM00382 ATPases associated with a variety of cellular activities AMF_501 SM00116 Domain in cystathionine beta-synthase and other proteins. AMF_501 SM00924 MgtE intracellular N domain AMF_510 SM00836 DALR anticodon binding domain AMF_510 SM01016 Arginyl tRNA synthetase N terminal dom AMF_519 SM00937 AMF_519 AMF_526 SM00248 ankyrin repeats AMF_537 SM00838 Elongation factor G C-terminus AMF_538 SM00382 ATPases associated with a variety of cellular activities AMF_538 SM01086 C-terminal, D2-small domain, of ClpB protein AMF_543 SM00316 Ribosomal protein S1-like RNA-binding domain AMF_543 SM00322 K homology RNA-binding domain AMF_555 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMF_568 SM00937 AMF_568 AMF_570 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMF_570 SM01232 AMF_570 AMF_592 SM00564 beta-propeller repeat AMF_595 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMF_606 SM00382 ATPases associated with a variety of cellular activities AMF_610 SM00729 Elongator protein 3, MiaB family, Radical SAM AMF_614 SM00878 Biotin carboxylase C-terminal domain AMF_616 SM00363 S4 RNA-binding domain AMF_618 SM00487 DEAD-like helicases superfamily AMF_618 SM00490 helicase superfamily c-terminal domain AMF_626 SM00382 ATPases associated with a variety of cellular activities AMF_626 SM00962 SRP54-type protein, GTPase domain AMF_626 SM00963 SRP54-type protein, helical bundle domain AMF_638 SM00861 Transketolase, pyrimidine binding domain AMF_641 SM00788 Adenylosuccinate synthetase AMF_643 SM00732 Likely ribonuclease with RNase H fold. AMF_655 SM00382 ATPases associated with a variety of cellular activities AMF_657 SM00903 Flavin reductase like domain AMF_670 SM00873 B3/4 domain AMF_670 SM00874 tRNA synthetase B5 domain AMF_670 SM00896 Ferredoxin-fold anticodon binding domain AMF_672 SM00662 RNA polymerases D AMF_686 SM01374 AMF_686 AMF_690 SM00322 K homology RNA-binding domain AMF_693 SM01382 AMF_693 AMF_693 SM01383 AMF_693 AMF_697 SM01403 AMF_697 AMF_699 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMF_701 SM00316 Ribosomal protein S1-like RNA-binding domain AMF_709 SM00244 prohibitin homologues AMF_710 SM00248 ankyrin repeats AMF_712 SM00829 Enoylreductase AMF_713 SM00382 ATPases associated with a variety of cellular activities AMF_716 SM00851 MGS-like domain AMF_716 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMF_724 SM00883 Chaperonin 10 Kd subunit AMF_728 SM00382 ATPases associated with a variety of cellular activities AMF_728 SM01086 C-terminal, D2-small domain, of ClpB protein AMF_736 SM01211 AMF_736 AMF_737 SM01228 AMF_737 AMF_742 SM00729 Elongator protein 3, MiaB family, Radical SAM AMF_742 SM00876 Biotin and Thiamin Synthesis associated domain AMF_747 SM00028 Tetratricopeptide repeats AMF_758 SM00357 Cold shock protein domain AMF_758 SM00382 ATPases associated with a variety of cellular activities AMF_758 SM00959 Rho termination factor, N-terminal domain AMF_760 SM00382 ATPases associated with a variety of cellular activities AMF_760 SM01086 C-terminal, D2-small domain, of ClpB protein AMF_770 SM01209 AMF_770 AMF_770 SM01210 AMF_770 AMF_771 SM01323 AMF_771 AMF_773 SM00480 DNA polymerase III beta subunit AMF_774 SM00474 3'-5' exonuclease AMF_775 SM00448 cheY-homologous receiver domain AMF_775 SM00862 Transcriptional regulatory protein, C terminal AMF_776 SM00530 Helix-turn-helix XRE-family like proteins AMF_784 SM01400 AMF_784 AMF_803 SM00244 prohibitin homologues AMF_804 SM00244 prohibitin homologues AMF_805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMF_807 SM00358 Double-stranded RNA binding motif AMF_807 SM00535 Ribonuclease III family AMF_817 SM00904 Riboflavin kinase AMF_824 SM00936 Penicillin-binding protein 5, C-terminal domain AMF_827 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMF_829 SM00935 Outer membrane protein (OmpH-like) AMF_831 SM00798 AICARFT/IMPCHase bienzyme AMF_831 SM00851 MGS-like domain AMF_844 SM00842 Cell division protein FtsA AMF_847 SM00382 ATPases associated with a variety of cellular activities AMF_848 SM00957 SecA DEAD-like domain AMF_848 SM00958 SecA preprotein cross-linking domain AMF_854 SM00382 ATPases associated with a variety of cellular activities AMF_854 SM00962 SRP54-type protein, GTPase domain AMF_854 SM00963 SRP54-type protein, helical bundle domain AMF_855 SM01329 AMF_855 AMF_859 SM00562 AMF_859 AMF_860 SM00530 Helix-turn-helix XRE-family like proteins AMF_867 SM00271 DnaJ molecular chaperone homology domain AMF_868 SM00932 Scaffold protein Nfu/NifU N terminal AMF_901 SM01133 AMF_901 AMF_907 SM01230 AMF_907 AMF_911 SM00382 ATPases associated with a variety of cellular activities AMF_914 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AMF_914 SM00475 5'-3' exonuclease AMF_914 SM00482 DNA polymerase A domain AMF_932 SM00563 Phosphate acyltransferases AMF_934 SM00986 Uracil DNA glycosylase superfamily AMF_934 SM00987 UreE urease accessory protein, C-terminal domain AMF_941 SM00487 DEAD-like helicases superfamily AMF_941 SM00490 helicase superfamily c-terminal domain AMF_952 SM00864 Tubulin/FtsZ family, GTPase domain AMF_952 SM00865 Tubulin/FtsZ family, C-terminal domain AMF_955 SM00470 ParB-like nuclease domain AMF_961 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMF_965 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMF_967 SM00382 ATPases associated with a variety of cellular activities AMF_968 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMF_978 SM00271 DnaJ molecular chaperone homology domain AMF_980 SM01207 AMF_980 AMF_984 SM01091 Transporter associated domain AMF_998 SM00028 Tetratricopeptide repeats