AM001 PF00731 AIR carboxylase AM005 PF01098 AM005 AM006 PF00216 Bacterial DNA-binding protein AM007 PF13411 MerR HTH family regulatory protein AM010 PF01225 Mur ligase family, catalytic domain AM011 PF02875 Mur ligase family, glutamate ligase domain AM011 PF08245 Mur ligase middle domain AM012 PF00579 tRNA synthetases class I (W and Y) AM013 PF01025 GrpE AM015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM015 PF01872 RibD C-terminal domain AM018 PF00117 Glutamine amidotransferase class-I AM018 PF06418 CTP synthase N-terminus AM019 PF03840 Preprotein translocase SecG subunit AM021 PF00589 Phage integrase family AM021 PF02899 Phage integrase, N-terminal SAM-like domain AM023 PF00005 ABC transporter AM024 PF00390 Malic enzyme, N-terminal domain AM024 PF01515 Phosphate acetyl/butaryl transferase AM024 PF03949 Malic enzyme, NAD binding domain AM025 PF13502 AM025 AM026 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM030 PF04956 AM030 AM035 PF02597 ThiS family AM037 PF05690 Thiazole biosynthesis protein ThiG AM038 PF10947 AM038 AM039 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM041 PF13624 SurA N-terminal domain AM042 PF03602 Conserved hypothetical protein 95 AM044 PF04956 AM044 AM051 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM051 PF07497 Rho termination factor, RNA-binding domain AM051 PF07498 Rho termination factor, N-terminal domain AM052 PF06242 AM052 AM053 PF01632 Ribosomal protein L35 AM054 PF00453 Ribosomal protein L20 AM055 PF01409 tRNA synthetases class II core domain (F) AM055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM056 PF00106 short chain dehydrogenase AM058 PF00132 Bacterial transferase hexapeptide (six repeats) AM058 PF12804 MobA-like NTP transferase domain AM058 PF14602 Hexapeptide repeat of succinyl-transferase AM059 PF00886 Ribosomal protein S16 AM060 PF00083 Sugar (and other) transporter AM065 PF04956 AM065 AM069 PF13343 Bacterial extracellular solute-binding protein AM070 PF03966 Trm112p-like protein AM073 PF03477 ATP cone domain AM074 PF02470 AM074 AM075 PF01617 AM075 AM077 PF04956 AM077 AM082 PF04956 AM082 AM085 PF00154 recA bacterial DNA recombination protein AM087 PF00156 Phosphoribosyl transferase domain AM088 PF00899 ThiF family AM090 PF01617 AM090 AM093 PF04800 ETC complex I subunit conserved region AM094 PF02609 Exonuclease VII small subunit AM096 PF00085 Thioredoxin AM097 PF03524 Conjugal transfer protein AM1000 PF01209 ubiE/COQ5 methyltransferase family AM1001 PF09334 tRNA synthetases class I (M) AM1005 PF00696 Amino acid kinase family AM1005 PF13840 ACT domain AM1007 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM1007 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AM1008 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM1009 PF01040 UbiA prenyltransferase family AM101 PF00676 Dehydrogenase E1 component AM1010 PF13525 Outer membrane lipoprotein AM1011 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM1011 PF02843 Phosphoribosylglycinamide synthetase, C domain AM1011 PF02844 Phosphoribosylglycinamide synthetase, N domain AM1012 PF02699 Preprotein translocase subunit AM1013 PF01380 SIS domain AM1013 PF13522 Glutamine amidotransferase domain AM1014 PF00712 DNA polymerase III beta subunit, N-terminal domain AM1014 PF02767 DNA polymerase III beta subunit, central domain AM1014 PF02768 DNA polymerase III beta subunit, C-terminal domain AM1015 PF01612 3'-5' exonuclease AM1016 PF00072 Response regulator receiver domain AM1016 PF00486 Transcriptional regulatory protein, C terminal AM1018 PF07022 Bacteriophage CI repressor helix-turn-helix domain AM102 PF00561 alpha/beta hydrolase fold AM1020 PF00719 Inorganic pyrophosphatase AM1022 PF00380 Ribosomal protein S9/S16 AM1023 PF00572 Ribosomal protein L13 AM1024 PF02321 Outer membrane efflux protein AM1025 PF10691 AM1025 AM1027 PF10609 ParA/MinD ATPase like AM1028 PF00156 Phosphoribosyl transferase domain AM1028 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM1030 PF02686 Glu-tRNAGln amidotransferase C subunit AM1032 PF00330 Aconitase family (aconitate hydratase) AM1032 PF00694 Aconitase C-terminal domain AM1035 PF04379 Protein of unknown function (DUF525) AM1036 PF02222 ATP-grasp domain AM105 PF00478 IMP dehydrogenase / GMP reductase domain AM105 PF00571 CBS domain AM1053 PF03135 AM1053 AM1054 PF04956 AM1054 AM1055 PF04956 AM1055 AM1056 PF04956 AM1056 AM1059 PF04956 AM1059 AM106 PF01513 ATP-NAD kinase AM1061 PF04956 AM1061 AM1063 PF01617 AM1063 AM1064 PF01145 SPFH domain / Band 7 family AM1065 PF01145 SPFH domain / Band 7 family AM1066 PF13180 PDZ domain AM1066 PF13365 Trypsin-like peptidase domain AM1067 PF03548 Outer membrane lipoprotein carrier protein LolA AM1069 PF00035 Double-stranded RNA binding motif AM1069 PF14622 Ribonuclease-III-like AM1070 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AM1079 PF00675 Insulinase (Peptidase family M16) AM1079 PF05193 Peptidase M16 inactive domain AM108 PF01197 Ribosomal protein L31 AM1080 PF00675 Insulinase (Peptidase family M16) AM1080 PF05193 Peptidase M16 inactive domain AM1081 PF01252 AM1081 AM1082 PF01687 Riboflavin kinase AM1082 PF06574 FAD synthetase AM1083 PF00462 Glutaredoxin AM1084 PF05175 Methyltransferase small domain AM1086 PF00557 Metallopeptidase family M24 AM1087 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM1087 PF00364 Biotin-requiring enzyme AM1089 PF02569 Pantoate-beta-alanine ligase AM1091 PF00768 D-alanyl-D-alanine carboxypeptidase AM1091 PF07943 Penicillin-binding protein 5, C-terminal domain AM1092 PF02683 AM1092 AM1092 PF13899 Thioredoxin-like AM1093 PF03937 Flavinator of succinate dehydrogenase AM1094 PF02163 Peptidase family M50 AM1096 PF01103 Surface antigen AM1096 PF07244 Surface antigen variable number repeat AM1097 PF03938 Outer membrane protein (OmpH-like) AM1098 PF07977 FabA-like domain AM1099 PF01808 AICARFT/IMPCHase bienzyme AM1099 PF02142 MGS-like domain AM110 PF00698 Acyl transferase domain AM1100 PF01066 CDP-alcohol phosphatidyltransferase AM1103 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM1104 PF01464 Transglycosylase SLT domain AM1105 PF02104 AM1105 AM1108 PF00805 Pentapeptide repeats (8 copies) AM1108 PF13599 Pentapeptide repeats (9 copies) AM1109 PF13685 Iron-containing alcohol dehydrogenase AM111 PF02223 Thymidylate kinase AM1110 PF00119 ATP synthase A chain AM1112 PF00137 ATP synthase subunit C AM1113 PF02326 AM1113 AM1114 PF00430 ATP synthase B/B' CF(0) AM1115 PF02491 SHS2 domain inserted in FTSA AM1115 PF14450 Cell division protein FtsA AM1116 PF02386 Cation transport protein AM1117 PF01171 PP-loop family AM1119 PF00004 ATPase family associated with various cellular activities (AAA) AM1119 PF01434 Peptidase family M41 AM112 PF07690 Major Facilitator Superfamily AM1120 PF01043 SecA preprotein cross-linking domain AM1120 PF02810 SEC-C motif AM1120 PF07516 SecA Wing and Scaffold domain AM1120 PF07517 SecA DEAD-like domain AM1122 PF05494 Toluene tolerance, Ttg2 AM1123 PF01545 Cation efflux family AM1125 PF03379 AM1125 AM1126 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM1128 PF13500 AAA domain AM1129 PF00448 SRP54-type protein, GTPase domain AM113 PF04280 Tim44-like domain AM1131 PF00180 Isocitrate/isopropylmalate dehydrogenase AM1133 PF01368 DHH family AM1133 PF02272 DHHA1 domain AM1136 PF01743 Poly A polymerase head domain AM1136 PF12627 Probable RNA and SrmB- binding site of polymerase A AM1137 PF00334 Nucleoside diphosphate kinase AM1138 PF01381 Helix-turn-helix AM1139 PF01617 AM1139 AM114 PF02556 Preprotein translocase subunit SecB AM1140 PF01617 AM1140 AM1142 PF01617 AM1142 AM1143 PF07306 AM1143 AM1144 PF01617 AM1144 AM1146 PF01106 NifU-like domain AM1146 PF08712 Scaffold protein Nfu/NifU N terminal AM1149 PF04956 AM1149 AM116 PF13462 Thioredoxin AM1164 PF01617 AM1164 AM1166 PF01617 AM1166 AM1168 PF01571 Aminomethyltransferase folate-binding domain AM1169 PF01578 AM1169 AM1169 PF16327 AM1169 AM117 PF00675 Insulinase (Peptidase family M16) AM117 PF05193 Peptidase M16 inactive domain AM1170 PF00133 tRNA synthetases class I (I, L, M and V) AM1170 PF08264 Anticodon-binding domain of tRNA AM1171 PF01668 SmpB protein AM1172 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM1173 PF01272 Transcription elongation factor, GreA/GreB, C-term AM1173 PF03449 Transcription elongation factor, N-terminal AM1174 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM1174 PF00306 ATP synthase alpha/beta chain, C terminal domain AM1174 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM1175 PF00213 ATP synthase delta (OSCP) subunit AM1179 PF07330 AM1179 AM118 PF01551 Peptidase family M23 AM1180 PF12895 Anaphase-promoting complex, cyclosome, subunit 3 AM1183 PF02687 AM1183 AM1183 PF12704 MacB-like periplasmic core domain AM1186 PF08886 Glutamate-cysteine ligase AM1187 PF00285 Citrate synthase AM1188 PF00117 Glutamine amidotransferase class-I AM1188 PF00958 GMP synthase C terminal domain AM119 PF03060 Nitronate monooxygenase AM1192 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM1192 PF00364 Biotin-requiring enzyme AM1192 PF02817 e3 binding domain AM1194 PF01791 DeoC/LacD family aldolase AM1196 PF00905 Penicillin binding protein transpeptidase domain AM1196 PF03717 Penicillin-binding Protein dimerisation domain AM1197 PF02355 Protein export membrane protein AM120 PF00677 Lumazine binding domain AM1200 PF02021 Uncharacterised protein family UPF0102 AM1202 PF00155 Aminotransferase class I and II AM1205 PF00579 tRNA synthetases class I (W and Y) AM1206 PF00120 Glutamine synthetase, catalytic domain AM1206 PF03951 Glutamine synthetase, beta-Grasp domain AM1207 PF00953 Glycosyl transferase family 4 AM1207 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM1208 PF00348 Polyprenyl synthetase AM1210 PF00005 ABC transporter AM1212 PF02405 AM1212 AM1213 PF00834 Ribulose-phosphate 3 epimerase family AM1214 PF00476 DNA polymerase family A AM1214 PF01367 5'-3' exonuclease, C-terminal SAM fold AM1214 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM1217 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM1217 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM1218 PF02463 RecF/RecN/SMC N terminal domain AM1219 PF01617 AM1219 AM1220 PF01617 AM1220 AM1221 PF01617 AM1221 AM1222 PF01617 AM1222 AM1223 PF01617 AM1223 AM1229 PF03023 AM1229 AM123 PF03429 AM123 AM1231 PF01790 AM1231 AM1233 PF01649 Ribosomal protein S20 AM1235 PF01553 Acyltransferase AM1236 PF01327 Polypeptide deformylase AM1237 PF03167 Uracil DNA glycosylase superfamily AM124 PF03429 AM124 AM1243 PF00271 Helicase conserved C-terminal domain AM1243 PF02151 UvrB/uvrC motif AM1243 PF04851 Type III restriction enzyme, res subunit AM1243 PF12344 Ultra-violet resistance protein B AM1245 PF02355 Protein export membrane protein AM1245 PF07549 SecD/SecF GG Motif AM125 PF00270 DEAD/DEAH box helicase AM125 PF00271 Helicase conserved C-terminal domain AM125 PF02559 CarD-like/TRCF domain AM125 PF03461 TRCF domain AM1253 PF04956 AM1253 AM1254 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM1255 PF01617 AM1255 AM1257 PF01617 AM1257 AM1258 PF01617 AM1258 AM126 PF00075 RNase H AM1261 PF00091 Tubulin/FtsZ family, GTPase domain AM1261 PF12327 FtsZ family, C-terminal domain AM1264 PF02130 Uncharacterized protein family UPF0054 AM1266 PF13614 AAA domain AM1267 PF02195 ParB-like nuclease domain AM1269 PF01782 RimM N-terminal domain AM1269 PF05239 PRC-barrel domain AM127 PF13116 AM127 AM127 PF13502 AM127 AM1270 PF01746 tRNA (Guanine-1)-methyltransferase AM1271 PF01245 Ribosomal protein L19 AM1272 PF02464 Competence-damaged protein AM1273 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM1273 PF03129 Anticodon binding domain AM1273 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM1274 PF00707 Translation initiation factor IF-3, C-terminal domain AM1274 PF05198 Translation initiation factor IF-3, N-terminal domain AM1275 PF02367 Uncharacterised P-loop hydrolase UPF0079 AM1276 PF01027 Inhibitor of apoptosis-promoting Bax1 AM1277 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM1277 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM1278 PF02575 YbaB/EbfC DNA-binding family AM128 PF00696 Amino acid kinase family AM1280 PF12169 DNA polymerase III subunits gamma and tau domain III AM1280 PF13177 DNA polymerase III, delta subunit AM1283 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM1283 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM1287 PF01098 AM1287 AM1288 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM1288 PF02772 S-adenosylmethionine synthetase, central domain AM1288 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM1289 PF01494 FAD binding domain AM1294 PF02091 Glycyl-tRNA synthetase alpha subunit AM1295 PF02092 AM1295 AM1295 PF05746 DALR anticodon binding domain AM1296 PF00226 DnaJ domain AM1296 PF00684 DnaJ central domain AM1296 PF01556 DnaJ C terminal domain AM1297 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM1297 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM1298 PF02660 AM1298 AM1299 PF02075 Crossover junction endodeoxyribonuclease RuvC AM130 PF01765 Ribosome recycling factor AM1300 PF00510 Cytochrome c oxidase subunit III AM1301 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM1303 PF00571 CBS domain AM1303 PF03471 Transporter associated domain AM1304 PF04586 AM1304 AM1305 PF04860 Phage portal protein AM1306 PF08241 Methyltransferase domain AM1307 PF02445 Quinolinate synthetase A protein AM1309 PF00037 4Fe-4S binding domain AM1309 PF11953 Domain of unknown function (DUF3470) AM131 PF01255 Putative undecaprenyl diphosphate synthase AM1310 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM1310 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AM1311 PF00707 Translation initiation factor IF-3, C-terminal domain AM1312 PF02534 Type IV secretory system Conjugative DNA transfer AM1313 PF00437 Type II/IV secretion system protein AM1314 PF03743 Bacterial conjugation TrbI-like protein AM1315 PF03524 Conjugal transfer protein AM1316 PF04335 VirB8 protein AM1317 PF00925 GTP cyclohydrolase II AM1319 PF13181 Tetratricopeptide repeat AM1319 PF13649 Methyltransferase domain AM132 PF01148 Cytidylyltransferase family AM1323 PF01678 Diaminopimelate epimerase AM1326 PF00162 Phosphoglycerate kinase AM1327 PF02601 AM1327 AM1327 PF13742 AM1327 AM1328 PF13717 AM1328 AM133 PF03429 AM133 AM1331 PF00132 Bacterial transferase hexapeptide (six repeats) AM1331 PF14602 Hexapeptide repeat of succinyl-transferase AM1331 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM1332 PF01926 50S ribosome-binding GTPase AM1332 PF10396 GTP-binding protein TrmE N-terminus AM1332 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AM1335 PF02441 Flavoprotein AM1336 PF00270 DEAD/DEAH box helicase AM1336 PF00271 Helicase conserved C-terminal domain AM1337 PF01370 NAD dependent epimerase/dehydratase family AM1338 PF00156 Phosphoribosyl transferase domain AM1338 PF13537 Glutamine amidotransferase domain AM1339 PF01195 Peptidyl-tRNA hydrolase AM1340 PF01386 Ribosomal L25p family AM1340 PF14693 Ribosomal protein TL5, C-terminal domain AM1346 PF00156 Phosphoribosyl transferase domain AM1347 PF01546 Peptidase family M20/M25/M40 AM1347 PF07687 Peptidase dimerisation domain AM1348 PF00999 Sodium/hydrogen exchanger family AM1348 PF02254 TrkA-N domain AM1349 PF00578 AhpC/TSA family AM1350 PF03653 AM1350 AM1351 PF02779 Transketolase, pyrimidine binding domain AM1351 PF02780 Transketolase, C-terminal domain AM1353 PF01523 Putative modulator of DNA gyrase AM1355 PF01926 50S ribosome-binding GTPase AM1355 PF06071 Protein of unknown function (DUF933) AM1356 PF02542 YgbB family AM1357 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM137 PF01259 SAICAR synthetase AM138 PF03129 Anticodon binding domain AM138 PF13393 Histidyl-tRNA synthetase AM139 PF13462 Thioredoxin AM141 PF02628 AM141 AM142 PF02548 Ketopantoate hydroxymethyltransferase AM144 PF00005 ABC transporter AM145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM149 PF00313 'Cold-shock' DNA-binding domain AM150 PF00512 His Kinase A (phospho-acceptor) domain AM150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM151 PF01612 3'-5' exonuclease AM152 PF00533 BRCA1 C Terminus (BRCT) domain AM152 PF01653 NAD-dependent DNA ligase adenylation domain AM152 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM152 PF03120 NAD-dependent DNA ligase OB-fold domain AM152 PF12826 Helix-hairpin-helix motif AM153 PF00462 Glutaredoxin AM154 PF01722 BolA-like protein AM157 PF06745 KaiC AM157 PF13541 Subunit ChlI of Mg-chelatase AM159 PF06808 AM159 AM159 PF11874 AM159 AM160 PF02674 AM160 AM161 PF01250 Ribosomal protein S6 AM161.5 PF01084 Ribosomal protein S18 AM162 PF01281 Ribosomal protein L9, N-terminal domain AM162 PF03948 Ribosomal protein L9, C-terminal domain AM164 PF00464 Serine hydroxymethyltransferase AM166 PF01491 Frataxin-like domain AM167 PF00005 ABC transporter AM167 PF00664 ABC transporter transmembrane region AM168 PF00890 FAD binding domain AM168 PF02910 Fumarate reductase flavoprotein C-term AM169 PF13085 2Fe-2S iron-sulfur cluster binding domain AM169 PF13183 4Fe-4S dicluster domain AM170 PF02511 Thymidylate synthase complementing protein AM171 PF07690 Major Facilitator Superfamily AM172 PF05491 Holliday junction DNA helicase ruvB C-terminus AM172 PF05496 Holliday junction DNA helicase ruvB N-terminus AM173 PF01330 RuvA N terminal domain AM173 PF07499 RuvA, C-terminal domain AM173 PF14520 Helix-hairpin-helix domain AM175 PF01578 AM175 AM177 PF00625 Guanylate kinase AM178 PF01522 Polysaccharide deacetylase AM179 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM179 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM180 PF03429 AM180 AM188 PF03429 AM188 AM189 PF12146 Putative lysophospholipase AM190 PF00034 Cytochrome c AM193 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM195 PF00391 PEP-utilising enzyme, mobile domain AM195 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM195 PF02896 PEP-utilising enzyme, TIM barrel domain AM197 PF06271 AM197 AM198 PF13419 Haloacid dehalogenase-like hydrolase AM199 PF00152 tRNA synthetases class II (D, K and N) AM199 PF02938 GAD domain AM200 PF00152 tRNA synthetases class II (D, K and N) AM200 PF01336 OB-fold nucleic acid binding domain AM202 PF04972 BON domain AM203 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM203 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM205 PF01820 D-ala D-ala ligase N-terminus AM205 PF07478 D-ala D-ala ligase C-terminus AM206 PF03799 Cell division protein FtsQ AM206 PF08478 POTRA domain, FtsQ-type AM207 PF00072 Response regulator receiver domain AM207 PF00158 Sigma-54 interaction domain AM207 PF02954 Bacterial regulatory protein, Fis family AM210 PF04956 AM210 AM215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM220 PF12706 Beta-lactamase superfamily domain AM222 PF00120 Glutamine synthetase, catalytic domain AM223 PF00528 Binding-protein-dependent transport system inner membrane component AM224 PF01411 tRNA synthetases class II (A) AM224 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM230 PF00549 CoA-ligase AM230 PF02629 CoA binding domain AM231 PF00549 CoA-ligase AM231 PF08442 ATP-grasp domain AM233 PF01165 Ribosomal protein S21 AM235 PF12849 PBP superfamily domain AM236 PF02630 SCO1/SenC AM237 PF03060 Nitronate monooxygenase AM238 PF01292 Prokaryotic cytochrome b561 AM240 PF00528 Binding-protein-dependent transport system inner membrane component AM241 PF13437 HlyD family secretion protein AM242 PF08511 COQ9 AM243 PF08245 Mur ligase middle domain AM244 PF04052 TolB amino-terminal domain AM244 PF07676 WD40-like Beta Propeller Repeat AM245 PF00753 Metallo-beta-lactamase superfamily AM245 PF07521 RNA-metabolising metallo-beta-lactamase AM248 PF00149 Calcineurin-like phosphoesterase AM249 PF00164 Ribosomal protein S12/S23 AM250 PF00177 Ribosomal protein S7p/S5e AM253 PF00009 Elongation factor Tu GTP binding domain AM253 PF00679 Elongation factor G C-terminus AM253 PF03144 Elongation factor Tu domain 2 AM253 PF03764 Elongation factor G, domain IV AM253 PF14492 Elongation Factor G, domain II AM254 PF00009 Elongation factor Tu GTP binding domain AM254 PF03143 Elongation factor Tu C-terminal domain AM254 PF03144 Elongation factor Tu domain 2 AM255 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM256 PF02357 Transcription termination factor nusG AM258 PF00298 Ribosomal protein L11, RNA binding domain AM258 PF03946 Ribosomal protein L11, N-terminal domain AM259 PF00687 Ribosomal protein L1p/L10e family AM260 PF00466 Ribosomal protein L10 AM261 PF00542 Ribosomal protein L7/L12 C-terminal domain AM262 PF00562 RNA polymerase Rpb2, domain 6 AM262 PF04560 RNA polymerase Rpb2, domain 7 AM262 PF04561 RNA polymerase Rpb2, domain 2 AM262 PF04563 RNA polymerase beta subunit AM262 PF04565 RNA polymerase Rpb2, domain 3 AM262 PF10385 RNA polymerase beta subunit external 1 domain AM263 PF00623 RNA polymerase Rpb1, domain 2 AM263 PF04983 RNA polymerase Rpb1, domain 3 AM263 PF04997 RNA polymerase Rpb1, domain 1 AM263 PF04998 RNA polymerase Rpb1, domain 5 AM263 PF05000 RNA polymerase Rpb1, domain 4 AM264 PF01351 Ribonuclease HII AM268 PF00155 Aminotransferase class I and II AM270 PF01899 AM270 AM271 PF03309 Type III pantothenate kinase AM273 PF01180 Dihydroorotate dehydrogenase AM275 PF01327 Polypeptide deformylase AM276 PF02230 Phospholipase/Carboxylesterase AM279 PF01734 Patatin-like phospholipase AM281 PF01243 Pyridoxamine 5'-phosphate oxidase AM281 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM282 PF02875 Mur ligase family, glutamate ligase domain AM282 PF08245 Mur ligase middle domain AM284 PF01053 Cys/Met metabolism PLP-dependent enzyme AM285 PF01722 BolA-like protein AM287 PF02811 PHP domain AM287 PF07733 Bacterial DNA polymerase III alpha subunit AM287 PF14579 Helix-hairpin-helix motif AM289 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM292 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM295 PF08543 Phosphomethylpyrimidine kinase AM296 PF00308 Bacterial dnaA protein AM297 PF01594 AM297 AM299 PF04384 Iron-sulphur cluster assembly AM301 PF00163 Ribosomal protein S4/S9 N-terminal domain AM301 PF01479 S4 domain AM303 PF00583 Acetyltransferase (GNAT) family AM305 PF04608 Phosphatidylglycerophosphatase A AM308 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM308 PF05697 Bacterial trigger factor protein (TF) AM308 PF05698 Bacterial trigger factor protein (TF) C-terminus AM309 PF00574 Clp protease AM310 PF06689 ClpX C4-type zinc finger AM310 PF07724 AAA domain (Cdc48 subfamily) AM310 PF10431 C-terminal, D2-small domain, of ClpB protein AM311 PF00004 ATPase family associated with various cellular activities (AAA) AM311 PF02190 ATP-dependent protease La (LON) domain AM311 PF05362 Lon protease (S16) C-terminal proteolytic domain AM313 PF00551 Formyl transferase AM313 PF02911 Formyl transferase, C-terminal domain AM315 PF00581 Rhodanese-like domain AM316 PF03618 AM316 AM318 PF02581 Thiamine monophosphate synthase/TENI AM320 PF00571 CBS domain AM320 PF01595 AM320 AM320 PF03471 Transporter associated domain AM321 PF02325 AM321 AM322 PF01580 FtsK/SpoIIIE family AM322 PF09397 Ftsk gamma domain AM322 PF13491 AM322 AM326 PF00202 Aminotransferase class-III AM327 PF00512 His Kinase A (phospho-acceptor) domain AM327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM329 PF02472 Biopolymer transport protein ExbD/TolR AM330 PF01618 AM330 AM332 PF01119 DNA mismatch repair protein, C-terminal domain AM332 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM333 PF08676 MutL C terminal dimerisation domain AM334 PF02481 DNA recombination-mediator protein A AM335 PF03054 tRNA methyl transferase AM338 PF00109 Beta-ketoacyl synthase, N-terminal domain AM338 PF02801 Beta-ketoacyl synthase, C-terminal domain AM339 PF00550 Phosphopantetheine attachment site AM340 PF00471 Ribosomal protein L33 AM343 PF02600 Disulfide bond formation protein DsbB AM349 PF03232 AM349 AM369 PF00580 UvrD/REP helicase N-terminal domain AM369 PF13361 UvrD-like helicase C-terminal domain AM372 PF00521 DNA gyrase/topoisomerase IV, subunit A AM372 PF03989 DNA gyrase C-terminal domain, beta-propeller AM373 PF00633 Helix-hairpin-helix motif AM373 PF00730 HhH-GPD superfamily base excision DNA repair protein AM376 PF00183 Hsp90 protein AM376 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM384 PF00206 Lyase AM384 PF10397 Adenylosuccinate lyase C-terminus AM385 PF01541 GIY-YIG catalytic domain AM385 PF02151 UvrB/uvrC motif AM385 PF08459 UvrC Helix-hairpin-helix N-terminal AM385 PF14520 Helix-hairpin-helix domain AM389 PF03099 Biotin/lipoate A/B protein ligase family AM390 PF13417 Glutathione S-transferase, N-terminal domain AM390 PF14497 Glutathione S-transferase, C-terminal domain AM391 PF11412 Disulphide bond corrector protein DsbC AM392 PF00005 ABC transporter AM394 PF02132 RecR protein AM394 PF13662 Toprim domain AM396 PF01297 Periplasmic solute binding protein family AM397 PF00005 ABC transporter AM399 PF03109 AM399 AM400 PF07690 Major Facilitator Superfamily AM401 PF00919 Uncharacterized protein family UPF0004 AM401 PF04055 Radical SAM superfamily AM402 PF13547 AM402 AM402 PF13550 AM402 AM404 PF09356 AM404 AM404 PF09931 AM404 AM405 PF00676 Dehydrogenase E1 component AM405 PF02779 Transketolase, pyrimidine binding domain AM405 PF16870 AM405 AM406 PF05065 Phage capsid family AM407 PF00701 Dihydrodipicolinate synthetase family AM409 PF01230 HIT domain AM412 PF00488 MutS domain V AM412 PF01624 MutS domain I AM412 PF05188 MutS domain II AM412 PF05190 MutS family domain IV AM412 PF05192 MutS domain III AM414 PF07690 Major Facilitator Superfamily AM415 PF00083 Sugar (and other) transporter AM416 PF00795 Carbon-nitrogen hydrolase AM416 PF02540 NAD synthase AM417 PF00490 Delta-aminolevulinic acid dehydratase AM418 PF00905 Penicillin binding protein transpeptidase domain AM418 PF03717 Penicillin-binding Protein dimerisation domain AM419 PF12705 PD-(D/E)XK nuclease superfamily AM420 PF00083 Sugar (and other) transporter AM424 PF00436 Single-strand binding protein family AM425 PF05292 Malonyl-CoA decarboxylase (MCD) AM425 PF17408 AM425 AM426 PF02637 GatB domain AM426 PF02934 GatB/GatE catalytic domain AM428 PF13561 Enoyl-(Acyl carrier protein) reductase AM430 PF00308 Bacterial dnaA protein AM430 PF08299 Bacterial dnaA protein helix-turn-helix AM430 PF11638 DnaA N-terminal domain AM432 PF01467 Cytidylyltransferase AM434 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM435 PF13177 DNA polymerase III, delta subunit AM436 PF01300 Telomere recombination AM438 PF01121 Dephospho-CoA kinase AM440 PF01964 ThiC family AM440 PF13667 ThiC-associated domain AM441 PF01713 Smr domain AM442 PF01192 RNA polymerase Rpb6 AM445 PF13744 Helix-turn-helix domain AM446 PF00133 tRNA synthetases class I (I, L, M and V) AM446 PF08264 Anticodon-binding domain of tRNA AM446 PF09334 tRNA synthetases class I (M) AM446 PF13603 Leucyl-tRNA synthetase, Domain 2 AM447 PF01026 TatD related DNase AM448 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM449 PF03100 CcmE AM451 PF01975 Survival protein SurE AM452 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM453 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM454 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM457 PF01029 NusB family AM458 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM460 PF02096 60Kd inner membrane protein AM460 PF14849 YidC periplasmic domain AM462 PF01066 CDP-alcohol phosphatidyltransferase AM462 PF08009 AM462 AM463 PF02666 AM463 AM465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM471 PF03033 Glycosyltransferase family 28 N-terminal domain AM471 PF04101 Glycosyltransferase family 28 C-terminal domain AM472 PF01132 Elongation factor P (EF-P) OB domain AM472 PF08207 Elongation factor P (EF-P) KOW-like domain AM472 PF09285 Elongation factor P, C-terminal AM473 PF00459 Inositol monophosphatase family AM474 PF00849 RNA pseudouridylate synthase AM474 PF01479 S4 domain AM475 PF00072 Response regulator receiver domain AM475 PF00990 GGDEF domain AM477 PF05088 AM477 AM480 PF06055 AM480 AM481 PF01406 tRNA synthetases class I (C) catalytic domain AM481 PF09190 DALR domain AM483 PF00268 Ribonucleotide reductase, small chain AM485 PF00578 AhpC/TSA family AM486 PF11020 AM486 AM487 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase AM488 PF01807 CHC2 zinc finger AM488 PF08275 DNA primase catalytic core, N-terminal domain AM488 PF13662 Toprim domain AM490 PF00140 Sigma-70 factor, region 1 AM490 PF03979 Sigma-70 factor, region 1 AM490 PF04539 Sigma-70 region 3 AM490 PF04542 Sigma-70 region 2 AM490 PF04545 Sigma-70, region 4 AM490 PF04546 Sigma-70, non-essential region AM492 PF01207 Dihydrouridine synthase (Dus) AM493 PF00288 GHMP kinases N terminal domain AM493 PF08544 GHMP kinases C terminal AM497 PF03091 CutA1 divalent ion tolerance protein AM498 PF00072 Response regulator receiver domain AM498 PF00512 His Kinase A (phospho-acceptor) domain AM498 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM498 PF13426 PAS domain AM499 PF01596 O-methyltransferase AM501 PF01256 Carbohydrate kinase AM501 PF03853 YjeF-related protein N-terminus AM502 PF01131 DNA topoisomerase AM502 PF01396 AM502 AM502 PF01751 Toprim domain AM502 PF13368 AM502 AM504 PF04386 Stringent starvation protein B AM506 PF01648 4'-phosphopantetheinyl transferase superfamily AM507 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM507 PF03129 Anticodon binding domain AM508 PF07722 Peptidase C26 AM509 PF01467 Cytidylyltransferase AM510 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM511 PF00578 AhpC/TSA family AM511 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM514 PF00155 Aminotransferase class I and II AM515 PF00155 Aminotransferase class I and II AM516 PF13145 PPIC-type PPIASE domain AM516 PF13624 SurA N-terminal domain AM517 PF00814 Glycoprotease family AM518 PF00375 Sodium:dicarboxylate symporter family AM520 PF00375 Sodium:dicarboxylate symporter family AM521 PF04085 rod shape-determining protein MreC AM522 PF06723 MreB/Mbl protein AM524 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM524 PF16198 AM524 AM525 PF00312 Ribosomal protein S15 AM526 PF00013 KH domain AM526 PF00575 S1 RNA binding domain AM526 PF01138 3' exoribonuclease family, domain 1 AM526 PF03725 3' exoribonuclease family, domain 2 AM526 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM527 PF08241 Methyltransferase domain AM528 PF00009 Elongation factor Tu GTP binding domain AM528 PF00679 Elongation factor G C-terminus AM528 PF03144 Elongation factor Tu domain 2 AM528 PF06421 GTP-binding protein LepA C-terminus AM528 PF14492 Elongation Factor G, domain II AM530 PF11670 AM530 AM552 PF00586 AIR synthase related protein, N-terminal domain AM552 PF02769 AIR synthase related protein, C-terminal domain AM555 PF03631 AM555 AM556 PF00202 Aminotransferase class-III AM557 PF05258 AM557 AM558 PF00398 Ribosomal RNA adenine dimethylase AM559 PF00121 Triosephosphate isomerase AM560 PF16868 AM560 AM561 PF00814 Glycoprotease family AM562 PF06271 AM562 AM563 PF02152 Dihydroneopterin aldolase AM564 PF00056 lactate/malate dehydrogenase, NAD binding domain AM564 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM566 PF13489 Methyltransferase domain AM568 PF11987 Translation-initiation factor 2 AM570 PF02502 Ribose/Galactose Isomerase AM571 PF13489 Methyltransferase domain AM572 PF00814 Glycoprotease family AM573 PF16868 AM573 AM574 PF17289 AM574 AM579 PF06199 AM579 AM581 PF05135 Phage gp6-like head-tail connector protein AM583 PF00171 Aldehyde dehydrogenase family AM583 PF01619 Proline dehydrogenase AM583 PF14850 DNA-binding domain of Proline dehydrogenase AM584 PF13561 Enoyl-(Acyl carrier protein) reductase AM586 PF14850 DNA-binding domain of Proline dehydrogenase AM590 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AM591 PF03372 Endonuclease/Exonuclease/phosphatase family AM593 PF00444 Ribosomal protein L36 AM594 PF04977 Septum formation initiator AM596 PF01016 Ribosomal L27 protein AM597 PF00829 Ribosomal prokaryotic L21 protein AM600 PF00113 Enolase, C-terminal TIM barrel domain AM600 PF03952 Enolase, N-terminal domain AM601 PF01018 GTP1/OBG AM601 PF01926 50S ribosome-binding GTPase AM605 PF01795 MraW methylase family AM606 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM617 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM618 PF01523 Putative modulator of DNA gyrase AM619 PF01227 GTP cyclohydrolase I AM620 PF00231 ATP synthase AM623 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM624 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AM625 PF00929 Exonuclease AM626 PF01078 Magnesium chelatase, subunit ChlI AM626 PF13335 AM626 AM626 PF13541 Subunit ChlI of Mg-chelatase AM631 PF04542 Sigma-70 region 2 AM631 PF04545 Sigma-70, region 4 AM632 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM640 PF00146 NADH dehydrogenase AM641 PF00384 Molybdopterin oxidoreductase AM641 PF09326 AM641 AM641 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM641 PF13510 2Fe-2S iron-sulfur cluster binding domain AM644 PF00204 DNA gyrase B AM644 PF00986 DNA gyrase B subunit, carboxyl terminus AM644 PF01751 Toprim domain AM644 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM645 PF02441 Flavoprotein AM647 PF03918 Cytochrome C biogenesis protein AM650 PF00111 2Fe-2S iron-sulfur cluster binding domain AM651 PF00012 Hsp70 protein AM652 PF00226 DnaJ domain AM654 PF01592 NifU-like N terminal domain AM655 PF00266 Aminotransferase class-V AM656 PF00266 Aminotransferase class-V AM656 PF02082 Transcriptional regulator AM657 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM658 PF01921 tRNA synthetases class I (K) AM661 PF01416 tRNA pseudouridine synthase AM662 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM662 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM664 PF00923 Transaldolase AM665 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM666 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM666 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM668 PF00571 CBS domain AM668 PF01769 Divalent cation transporter AM668 PF03448 MgtE intracellular N domain AM669 PF01728 FtsJ-like methyltransferase AM678 PF00750 tRNA synthetases class I (R) AM678 PF03485 Arginyl tRNA synthetase N terminal domain AM678 PF05746 DALR anticodon binding domain AM680 PF02565 Recombination protein O C terminal AM680 PF11967 Recombination protein O N terminal AM684 PF00133 tRNA synthetases class I (I, L, M and V) AM684 PF08264 Anticodon-binding domain of tRNA AM685 PF00578 AhpC/TSA family AM686 PF04452 RNA methyltransferase AM692 PF00472 RF-1 domain AM692 PF03462 PCRF domain AM694 PF01709 Transcriptional regulator AM698 PF01425 Amidase AM699 PF08245 Mur ligase middle domain AM700 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM700 PF03900 Porphobilinogen deaminase, C-terminal domain AM701 PF01565 FAD binding domain AM701 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM705 PF12796 Ankyrin repeats (3 copies) AM707 PF12838 4Fe-4S dicluster domain AM708 PF00717 Peptidase S24-like AM717 PF04956 AM717 AM723 PF04956 AM723 AM730 PF00009 Elongation factor Tu GTP binding domain AM730 PF00679 Elongation factor G C-terminus AM730 PF03144 Elongation factor Tu domain 2 AM731 PF00004 ATPase family associated with various cellular activities (AAA) AM731 PF07724 AAA domain (Cdc48 subfamily) AM731 PF10431 C-terminal, D2-small domain, of ClpB protein AM733 PF03741 AM733 AM734 PF02033 Ribosome-binding factor A AM735 PF00009 Elongation factor Tu GTP binding domain AM735 PF11987 Translation-initiation factor 2 AM736 PF08529 NusA N-terminal domain AM736 PF13184 NusA-like KH domain AM736 PF14520 Helix-hairpin-helix domain AM738 PF00873 AcrB/AcrD/AcrF family AM740 PF00902 Sec-independent protein translocase protein (TatC) AM741 PF04551 GcpE protein AM743 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM743 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AM743 PF13288 DXP reductoisomerase C-terminal domain AM744 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM745 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM746 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM746 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM747 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM748 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM750 PF10531 SLBB domain AM750 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM755 PF01715 IPP transferase AM758 PF02646 AM758 AM759 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM759 PF02403 Seryl-tRNA synthetase N-terminal domain AM762 PF01218 Coproporphyrinogen III oxidase AM763 PF00696 Amino acid kinase family AM764 PF01926 50S ribosome-binding GTPase AM767 PF00472 RF-1 domain AM767 PF03462 PCRF domain AM769 PF01039 Carboxyl transferase domain AM771 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM771 PF06827 Zinc finger found in FPG and IleRS AM771 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM775 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM778 PF13609 Gram-negative porin AM779 PF13609 Gram-negative porin AM781 PF02167 Cytochrome C1 family AM783 PF00032 Cytochrome b(C-terminal)/b6/petD AM783 PF00033 Cytochrome b(N-terminal)/b6/petB AM784 PF00355 Rieske [2Fe-2S] domain AM784 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AM789 PF00950 AM789 AM790 PF04430 Protein of unknown function (DUF498/DUF598) AM791 PF00889 Elongation factor TS AM792 PF00318 Ribosomal protein S2 AM793 PF02545 Maf-like protein AM795 PF01176 Translation initiation factor 1A / IF-1 AM796 PF16576 AM796 AM797 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM797 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM798 PF13360 PQQ-like domain AM801 PF01926 50S ribosome-binding GTPase AM801 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM802 PF01676 Metalloenzyme superfamily AM802 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM803 PF00117 Glutamine amidotransferase class-I AM803 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM804 PF02401 LytB protein AM805 PF00692 dUTPase AM807 PF01225 Mur ligase family, catalytic domain AM807 PF02875 Mur ligase family, glutamate ligase domain AM807 PF08245 Mur ligase middle domain AM809 PF09343 AM809 AM810 PF04610 AM810 AM811 PF04610 AM811 AM812 PF04610 AM812 AM813 PF04610 AM813 AM814 PF03135 AM814 AM815 PF05101 AM815 AM816 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM816 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM818 PF00528 Binding-protein-dependent transport system inner membrane component AM818 PF11812 AM818 AM820 PF04055 Radical SAM superfamily AM824 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AM824 PF00364 Biotin-requiring enzyme AM824 PF02785 Biotin carboxylase C-terminal domain AM824 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM825 PF00849 RNA pseudouridylate synthase AM825 PF01479 S4 domain AM826 PF00830 Ribosomal L28 family AM827 PF00270 DEAD/DEAH box helicase AM827 PF00271 Helicase conserved C-terminal domain AM829 PF07722 Peptidase C26 AM830 PF02602 Uroporphyrinogen-III synthase HemD AM832 PF00557 Metallopeptidase family M24 AM832 PF01321 Creatinase/Prolidase N-terminal domain AM832 PF16188 AM832 AM832 PF16189 AM832 AM833 PF13975 AM833 AM836 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AM837 PF01926 50S ribosome-binding GTPase AM837 PF07650 KH domain AM839 PF00448 SRP54-type protein, GTPase domain AM839 PF02881 SRP54-type protein, helical bundle domain AM839 PF02978 Signal peptide binding domain AM840 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AM841 PF03364 Polyketide cyclase / dehydrase and lipid transport AM842 PF00012 Hsp70 protein AM844 PF10150 Ribonuclease E/G family AM846 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM847 PF04039 AM847 AM848 PF13244 AM848 AM849 PF03334 AM849 AM851 PF04066 AM851 AM852 PF00456 Transketolase, thiamine diphosphate binding domain AM852 PF02779 Transketolase, pyrimidine binding domain AM852 PF02780 Transketolase, C-terminal domain AM853 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AM854 PF00691 OmpA family AM856 PF00709 Adenylosuccinate synthetase AM858 PF01018 GTP1/OBG AM858 PF01926 50S ribosome-binding GTPase AM859 PF03652 Uncharacterised protein family (UPF0081) AM860 PF00317 Ribonucleotide reductase, all-alpha domain AM860 PF02867 Ribonucleotide reductase, barrel domain AM861 PF00348 Polyprenyl synthetase AM863 PF01266 FAD dependent oxidoreductase AM865 PF00772 DnaB-like helicase N terminal domain AM865 PF03796 DnaB-like helicase C terminal domain AM868 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM869 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM869 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM870 PF02504 Fatty acid synthesis protein AM870.5 PF01783 Ribosomal L32p protein family AM871 PF01702 Queuine tRNA-ribosyltransferase AM872 PF00005 ABC transporter AM873 PF01113 Dihydrodipicolinate reductase, N-terminus AM873 PF05173 Dihydrodipicolinate reductase, C-terminus AM875 PF01613 Flavin reductase like domain AM876 PF01040 UbiA prenyltransferase family AM880.5 PF00468 Ribosomal protein L34 AM881 PF00825 Ribonuclease P AM882 PF01235 AM882 AM884 PF03772 AM884 AM884 PF13567 AM884 AM885 PF01588 Putative tRNA binding domain AM885 PF03147 Ferredoxin-fold anticodon binding domain AM885 PF03483 B3/4 domain AM885 PF03484 tRNA synthetase B5 domain AM886 PF01196 Ribosomal protein L17 AM887 PF01000 RNA polymerase Rpb3/RpoA insert domain AM887 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM887 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM888 PF00411 Ribosomal protein S11 AM890 PF00416 Ribosomal protein S13/S18 AM891 PF00406 Adenylate kinase AM892 PF00344 SecY translocase AM893 PF00828 Ribosomal protein L18e/L15 AM894 PF00333 Ribosomal protein S5, N-terminal domain AM894 PF03719 Ribosomal protein S5, C-terminal domain AM895 PF00861 Ribosomal L18p/L5e family AM896 PF00347 Ribosomal protein L6 AM897 PF00410 Ribosomal protein S8 AM898 PF00253 Ribosomal protein S14p/S29e AM899 PF00281 Ribosomal protein L5 AM899 PF00673 ribosomal L5P family C-terminus AM900 PF00467 KOW motif AM900 PF17136 AM900 AM901 PF00238 Ribosomal protein L14p/L23e AM903 PF00366 Ribosomal protein S17 AM904 PF00831 Ribosomal L29 protein AM905 PF00252 Ribosomal protein L16p/L10e AM906 PF00189 Ribosomal protein S3, C-terminal domain AM906 PF07650 KH domain AM907 PF00237 Ribosomal protein L22p/L17e AM908 PF00203 Ribosomal protein S19 AM909 PF00181 Ribosomal Proteins L2, RNA binding domain AM909 PF03947 Ribosomal Proteins L2, C-terminal domain AM910 PF00276 Ribosomal protein L23 AM911 PF00573 Ribosomal protein L4/L1 family AM912 PF00297 Ribosomal protein L3 AM913 PF00338 Ribosomal protein S10p/S20e AM914 PF00009 Elongation factor Tu GTP binding domain AM914 PF03143 Elongation factor Tu C-terminal domain AM914 PF03144 Elongation factor Tu domain 2 AM915 PF00588 SpoU rRNA Methylase family AM915 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM916 PF02224 Cytidylate kinase AM917 PF00575 S1 RNA binding domain AM918 PF01343 Peptidase family S49 AM919 PF13747 AM919 AM920 PF05164 Cell division protein ZapA AM922 PF00762 Ferrochelatase AM923 PF03969 AFG1-like ATPase AM925 PF01145 SPFH domain / Band 7 family AM926 PF12796 Ankyrin repeats (3 copies) AM927 PF00580 UvrD/REP helicase N-terminal domain AM927 PF13361 UvrD-like helicase C-terminal domain AM928 PF00107 Zinc-binding dehydrogenase AM928 PF08240 Alcohol dehydrogenase GroES-like domain AM929 PF00005 ABC transporter AM929 PF00664 ABC transporter transmembrane region AM931 PF00809 Pterin binding enzyme AM933 PF02142 MGS-like domain AM933 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM933 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM937 PF00206 Lyase AM937 PF10415 Fumarase C C-terminus AM938 PF04127 DNA / pantothenate metabolism flavoprotein AM939 PF01979 Amidohydrolase family AM940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM941 PF03099 Biotin/lipoate A/B protein ligase family AM942 PF04002 RadC-like JAB domain AM943 PF00166 Chaperonin 10 Kd subunit AM944 PF00118 TCP-1/cpn60 chaperonin family AM947 PF00106 short chain dehydrogenase AM949 PF00004 ATPase family associated with various cellular activities (AAA) AM949 PF02861 Clp amino terminal domain AM949 PF07724 AAA domain (Cdc48 subfamily) AM949 PF10431 C-terminal, D2-small domain, of ClpB protein AM953 PF00775 Dioxygenase AM956 PF00883 Cytosol aminopeptidase family, catalytic domain AM956 PF02789 Cytosol aminopeptidase family, N-terminal domain AM957 PF00551 Formyl transferase AM960 PF13507 CobB/CobQ-like glutamine amidotransferase domain AM961 PF01134 Glucose inhibited division protein A AM961 PF13932 GidA associated domain 3 AM964 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM965 PF01551 Peptidase family M23 AM967 PF07310 AM967 AM969 PF04055 Radical SAM superfamily AM969 PF06968 Biotin and Thiamin Synthesis associated domain AM973 PF00586 AIR synthase related protein, N-terminal domain AM973 PF02769 AIR synthase related protein, C-terminal domain AM975 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM979 PF01435 Peptidase family M48 AM980 PF02410 Oligomerisation domain AM982 PF10090 Uncharacterized protein conserved in bacteria (DUF2328) AM983 PF00586 AIR synthase related protein, N-terminal domain AM983 PF02769 AIR synthase related protein, C-terminal domain AM984 PF00589 Phage integrase family AM984 PF02899 Phage integrase, N-terminal SAM-like domain AM985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM987 PF01617 AM987 AM989 PF04956 AM989 AM990 PF04956 AM990 AM992 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM992 PF07497 Rho termination factor, RNA-binding domain AM992 PF07498 Rho termination factor, N-terminal domain AM998 PF00227 Proteasome subunit AM999 PF00004 ATPase family associated with various cellular activities (AAA) AM999 PF07724 AAA domain (Cdc48 subfamily) AM999 PF10431 C-terminal, D2-small domain, of ClpB protein