AM001 SM01001 AIR carboxylase AM006 SM00411 bacterial (prokaryotic) histone like domain AM007 SM00422 helix_turn_helix, mercury resistance AM023 SM00382 ATPases associated with a variety of cellular activities AM024 SM00919 Malic enzyme, NAD binding domain AM024 SM01274 AM024 AM051 SM00357 Cold shock protein domain AM051 SM00382 ATPases associated with a variety of cellular activities AM051 SM00959 Rho termination factor, N-terminal domain AM085 SM00382 ATPases associated with a variety of cellular activities AM1011 SM01209 AM1011 AM1011 SM01210 AM1011 AM1012 SM01323 AM1012 AM1014 SM00480 DNA polymerase III beta subunit AM1015 SM00474 3'-5' exonuclease AM1016 SM00448 cheY-homologous receiver domain AM1016 SM00862 Transcriptional regulatory protein, C terminal AM1018 SM00530 Helix-turn-helix XRE-family like proteins AM1028 SM01400 AM1028 AM105 SM00116 Domain in cystathionine beta-synthase and other proteins. AM105 SM01240 AM105 AM1064 SM00244 prohibitin homologues AM1065 SM00244 prohibitin homologues AM1066 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM1069 SM00358 Double-stranded RNA binding motif AM1069 SM00535 Ribonuclease III family AM1082 SM00904 Riboflavin kinase AM1091 SM00936 Penicillin-binding protein 5, C-terminal domain AM1094 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM1097 SM00935 Outer membrane protein (OmpH-like) AM1099 SM00798 AICARFT/IMPCHase bienzyme AM1099 SM00851 MGS-like domain AM110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM1115 SM00842 Cell division protein FtsA AM1119 SM00382 ATPases associated with a variety of cellular activities AM1120 SM00957 SecA DEAD-like domain AM1120 SM00958 SecA preprotein cross-linking domain AM1129 SM00382 ATPases associated with a variety of cellular activities AM1129 SM00962 SRP54-type protein, GTPase domain AM1129 SM00963 SRP54-type protein, helical bundle domain AM113 SM00978 AM113 AM1131 SM01329 AM1131 AM1137 SM00562 AM1137 AM1138 SM00530 Helix-turn-helix XRE-family like proteins AM1146 SM00932 Scaffold protein Nfu/NifU N terminal AM1194 SM01133 AM1194 AM1206 SM01230 AM1206 AM1210 SM00382 ATPases associated with a variety of cellular activities AM1214 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM1214 SM00475 5'-3' exonuclease AM1214 SM00482 DNA polymerase A domain AM1235 SM00563 Phosphate acyltransferases AM1237 SM00986 Uracil DNA glycosylase superfamily AM1237 SM00987 UreE urease accessory protein, C-terminal domain AM1243 SM00487 DEAD-like helicases superfamily AM1243 SM00490 helicase superfamily c-terminal domain AM125 SM00487 DEAD-like helicases superfamily AM125 SM00490 helicase superfamily c-terminal domain AM125 SM00982 AM125 AM125 SM01058 CarD-like/TRCF domain AM1261 SM00864 Tubulin/FtsZ family, GTPase domain AM1261 SM00865 Tubulin/FtsZ family, C-terminal domain AM1267 SM00470 ParB-like nuclease domain AM1273 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM1277 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM1280 SM00382 ATPases associated with a variety of cellular activities AM1283 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM1296 SM00271 DnaJ molecular chaperone homology domain AM1298 SM01207 AM1298 AM1303 SM01091 Transporter associated domain AM1319 SM00028 Tetratricopeptide repeats AM1336 SM00487 DEAD-like helicases superfamily AM1336 SM00490 helicase superfamily c-terminal domain AM1351 SM00861 Transketolase, pyrimidine binding domain AM144 SM00382 ATPases associated with a variety of cellular activities AM149 SM00357 Cold shock protein domain AM150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM150 SM00387 Histidine kinase-like ATPases AM150 SM00388 His Kinase A (phosphoacceptor) domain AM151 SM00474 3'-5' exonuclease AM152 SM00292 breast cancer carboxy-terminal domain AM152 SM00532 Ligase N family AM157 SM00382 ATPases associated with a variety of cellular activities AM166 SM01219 AM166 AM167 SM00382 ATPases associated with a variety of cellular activities AM172 SM00382 ATPases associated with a variety of cellular activities AM177 SM00072 Guanylate kinase homologues. AM202 SM00749 bacterial OsmY and nodulation domain AM207 SM00382 ATPases associated with a variety of cellular activities AM207 SM00448 cheY-homologous receiver domain AM220 SM00849 Metallo-beta-lactamase superfamily AM222 SM01230 AM222 AM224 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM230 SM00881 CoA binding domain AM245 SM00849 Metallo-beta-lactamase superfamily AM253 SM00838 Elongation factor G C-terminus AM253 SM00889 Elongation factor G, domain IV AM256 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM258 SM00649 Ribosomal protein L11/L12 AM263 SM00663 RNA polymerase I subunit A N-terminus AM287 SM00481 DNA polymerase alpha chain like domain AM301 SM00363 S4 RNA-binding domain AM301 SM01390 AM301 AM310 SM00382 ATPases associated with a variety of cellular activities AM310 SM00994 ClpX C4-type zinc finger AM310 SM01086 C-terminal, D2-small domain, of ClpB protein AM311 SM00382 ATPases associated with a variety of cellular activities AM311 SM00464 Found in ATP-dependent protease La (LON) AM315 SM00450 Rhodanese Homology Domain AM320 SM01091 Transporter associated domain AM322 SM00843 AM322 AM327 SM00387 Histidine kinase-like ATPases AM327 SM00388 His Kinase A (phosphoacceptor) domain AM332 SM01340 AM332 AM333 SM00853 MutL C terminal dimerisation domain AM338 SM00825 Beta-ketoacyl synthase AM372 SM00434 DNA Topoisomerase IV AM373 SM00478 endonuclease III AM373 SM00525 AM373 AM376 SM00387 Histidine kinase-like ATPases AM384 SM00998 Adenylosuccinate lyase C-terminus AM385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM385 SM00465 GIY-YIG type nucleases (URI domain) AM392 SM00382 ATPases associated with a variety of cellular activities AM394 SM00493 AM394 AM397 SM00382 ATPases associated with a variety of cellular activities AM401 SM00729 Elongator protein 3, MiaB family, Radical SAM AM405 SM00861 Transketolase, pyrimidine binding domain AM407 SM01130 AM407 AM412 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AM412 SM00534 ATPase domain of DNA mismatch repair MUTS family AM417 SM01004 Delta-aminolevulinic acid dehydratase AM426 SM00845 GatB domain AM430 SM00382 ATPases associated with a variety of cellular activities AM430 SM00760 Bacterial dnaA protein helix-turn-helix domain AM442 SM01409 AM442 AM448 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM472 SM00841 Elongation factor P, C-terminal AM472 SM01185 AM472 AM474 SM00363 S4 RNA-binding domain AM475 SM00267 diguanylate cyclase AM475 SM00448 cheY-homologous receiver domain AM481 SM00840 AM481 AM488 SM00400 zinc finger AM488 SM00493 AM488 AM498 SM00387 Histidine kinase-like ATPases AM498 SM00388 His Kinase A (phosphoacceptor) domain AM498 SM00448 cheY-homologous receiver domain AM502 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM502 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM502 SM00493 AM502 AM525 SM01387 AM525 AM526 SM00316 Ribosomal protein S1-like RNA-binding domain AM526 SM00322 K homology RNA-binding domain AM528 SM00838 Elongation factor G C-terminus AM558 SM00650 Ribosomal RNA adenine dimethylases AM563 SM00905 Dihydroneopterin aldolase AM584 SM00822 AM584 AM600 SM01192 AM600 AM600 SM01193 AM600 AM625 SM00479 AM625 AM626 SM00382 ATPases associated with a variety of cellular activities AM638 SM00248 ankyrin repeats AM641 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM644 SM00387 Histidine kinase-like ATPases AM644 SM00433 TopoisomeraseII AM652 SM00271 DnaJ molecular chaperone homology domain AM666 SM00382 ATPases associated with a variety of cellular activities AM668 SM00116 Domain in cystathionine beta-synthase and other proteins. AM668 SM00924 MgtE intracellular N domain AM678 SM00836 DALR anticodon binding domain AM678 SM01016 Arginyl tRNA synthetase N terminal dom AM692 SM00937 AM692 AM705 SM00248 ankyrin repeats AM730 SM00838 Elongation factor G C-terminus AM731 SM00382 ATPases associated with a variety of cellular activities AM731 SM01086 C-terminal, D2-small domain, of ClpB protein AM736 SM00316 Ribosomal protein S1-like RNA-binding domain AM736 SM00322 K homology RNA-binding domain AM750 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM767 SM00937 AM767 AM771 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM771 SM01232 AM771 AM798 SM00564 beta-propeller repeat AM803 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AM814 SM00382 ATPases associated with a variety of cellular activities AM820 SM00729 Elongator protein 3, MiaB family, Radical SAM AM824 SM00878 Biotin carboxylase C-terminal domain AM825 SM00363 S4 RNA-binding domain AM827 SM00487 DEAD-like helicases superfamily AM827 SM00490 helicase superfamily c-terminal domain AM839 SM00382 ATPases associated with a variety of cellular activities AM839 SM00962 SRP54-type protein, GTPase domain AM839 SM00963 SRP54-type protein, helical bundle domain AM852 SM00861 Transketolase, pyrimidine binding domain AM856 SM00788 Adenylosuccinate synthetase AM859 SM00732 Likely ribonuclease with RNase H fold. AM872 SM00382 ATPases associated with a variety of cellular activities AM875 SM00903 Flavin reductase like domain AM885 SM00873 B3/4 domain AM885 SM00874 tRNA synthetase B5 domain AM885 SM00896 Ferredoxin-fold anticodon binding domain AM887 SM00662 RNA polymerases D AM900 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM901 SM01374 AM901 AM906 SM00322 K homology RNA-binding domain AM909 SM01382 AM909 AM909 SM01383 AM909 AM913 SM01403 AM913 AM915 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM917 SM00316 Ribosomal protein S1-like RNA-binding domain AM925 SM00244 prohibitin homologues AM926 SM00248 ankyrin repeats AM928 SM00829 Enoylreductase AM929 SM00382 ATPases associated with a variety of cellular activities AM933 SM00851 MGS-like domain AM933 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM943 SM00883 Chaperonin 10 Kd subunit AM949 SM00382 ATPases associated with a variety of cellular activities AM949 SM01086 C-terminal, D2-small domain, of ClpB protein AM960 SM01211 AM960 AM961 SM01228 AM961 AM969 SM00729 Elongator protein 3, MiaB family, Radical SAM AM969 SM00876 Biotin and Thiamin Synthesis associated domain AM979 SM00028 Tetratricopeptide repeats AM992 SM00357 Cold shock protein domain AM992 SM00382 ATPases associated with a variety of cellular activities AM992 SM00959 Rho termination factor, N-terminal domain AM999 SM00382 ATPases associated with a variety of cellular activities AM999 SM01086 C-terminal, D2-small domain, of ClpB protein