AM1066 066668738856464d50064b79fdc9f211 487 Gene3D G3DSA:2.30.42.10 390 483 3.6E-11 T 11-10-2018 AM1066 066668738856464d50064b79fdc9f211 487 Pfam PF13365 Trypsin-like peptidase domain 106 240 3.1E-36 T 11-10-2018 AM1066 066668738856464d50064b79fdc9f211 487 SMART SM00228 280 362 6.6E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AM1066 066668738856464d50064b79fdc9f211 487 SMART SM00228 390 471 5.4E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AM1066 066668738856464d50064b79fdc9f211 487 Pfam PF13180 PDZ domain 280 370 1.4E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AM1066 066668738856464d50064b79fdc9f211 487 Pfam PF13180 PDZ domain 406 457 3.0E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AM1066 066668738856464d50064b79fdc9f211 487 SUPERFAMILY SSF50494 6 289 1.96E-62 T 11-10-2018 IPR009003 Peptidase S1, PA clan AM1066 066668738856464d50064b79fdc9f211 487 SUPERFAMILY SSF50156 407 469 1.17E-7 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AM1066 066668738856464d50064b79fdc9f211 487 Gene3D G3DSA:2.30.42.10 275 378 1.6E-29 T 11-10-2018 AM1066 066668738856464d50064b79fdc9f211 487 SUPERFAMILY SSF50156 251 375 7.62E-26 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AM1066 066668738856464d50064b79fdc9f211 487 PRINTS PR00834 HtrA/DegQ protease family signature 136 156 4.4E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 PRINTS PR00834 HtrA/DegQ protease family signature 233 250 4.4E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 PRINTS PR00834 HtrA/DegQ protease family signature 115 127 4.4E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 4.4E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 4.4E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 PRINTS PR00834 HtrA/DegQ protease family signature 211 228 4.4E-50 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 471 5.7E-139 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 AM1066 066668738856464d50064b79fdc9f211 487 Gene3D G3DSA:2.40.10.120 39 273 3.1E-77 T 11-10-2018 AM842 40255213fa599ea18ce45d369c42cb04 645 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 Gene3D G3DSA:3.30.420.40 11 378 1.9E-152 T 11-10-2018 AM842 40255213fa599ea18ce45d369c42cb04 645 Pfam PF00012 Hsp70 protein 10 604 8.4E-262 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 13 20 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 9 604 8.8E-281 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AM842 40255213fa599ea18ce45d369c42cb04 645 SUPERFAMILY SSF100934 506 605 4.9E-16 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 Gene3D G3DSA:3.90.640.10 226 313 1.9E-152 T 11-10-2018 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 59 67 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 332 348 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 37 49 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 9 22 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 199 209 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 139 159 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.0E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 SUPERFAMILY SSF53067 10 185 3.11E-60 T 11-10-2018 AM842 40255213fa599ea18ce45d369c42cb04 645 SUPERFAMILY SSF100920 383 539 1.02E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 Gene3D G3DSA:3.30.420.40 181 365 1.9E-152 T 11-10-2018 AM842 40255213fa599ea18ce45d369c42cb04 645 SUPERFAMILY SSF53067 188 381 2.59E-63 T 11-10-2018 AM842 40255213fa599ea18ce45d369c42cb04 645 Gene3D G3DSA:2.60.34.10 382 522 1.2E-66 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 Gene3D G3DSA:1.20.1270.10 523 604 1.0E-23 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM842 40255213fa599ea18ce45d369c42cb04 645 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 7 637 36.282 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 AM1277 c2c865523d47a709ba186fde0f484786 336 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 318 5.0E-51 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM1277 c2c865523d47a709ba186fde0f484786 336 Gene3D G3DSA:3.30.360.10 128 315 1.6E-124 T 11-10-2018 AM1277 c2c865523d47a709ba186fde0f484786 336 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 118 2.9E-25 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM1277 c2c865523d47a709ba186fde0f484786 336 SUPERFAMILY SSF55347 129 319 1.48E-69 T 11-10-2018 AM1277 c2c865523d47a709ba186fde0f484786 336 PIRSF PIRSF000148 1 336 1.5E-120 T 11-10-2018 AM1277 c2c865523d47a709ba186fde0f484786 336 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 332 31.517 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM1277 c2c865523d47a709ba186fde0f484786 336 Gene3D G3DSA:3.40.50.720 4 329 1.6E-124 T 11-10-2018 AM1277 c2c865523d47a709ba186fde0f484786 336 SUPERFAMILY SSF51735 3 157 9.06E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1277 c2c865523d47a709ba186fde0f484786 336 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 3 333 2.3E-120 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM1277 c2c865523d47a709ba186fde0f484786 336 SMART SM00859 3 119 5.3E-34 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AM1094 733d37896afc0d9d7b10aca6481eeabf 367 Pfam PF02163 Peptidase family M50 26 352 1.2E-67 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 AM1094 733d37896afc0d9d7b10aca6481eeabf 367 SUPERFAMILY SSF50156 105 210 8.68E-19 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 AM1094 733d37896afc0d9d7b10aca6481eeabf 367 SMART SM00228 132 202 4.1E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 AM1094 733d37896afc0d9d7b10aca6481eeabf 367 Gene3D G3DSA:2.30.42.10 143 229 3.7E-17 T 11-10-2018 AM240 030d49d82b7b7c5997fc392cb3fb9691 542 SUPERFAMILY SSF161098 7 256 2.99E-29 T 11-10-2018 IPR035906 MetI-like superfamily AM240 030d49d82b7b7c5997fc392cb3fb9691 542 Gene3D G3DSA:1.10.3720.10 6 263 4.6E-36 T 11-10-2018 IPR035906 MetI-like superfamily AM240 030d49d82b7b7c5997fc392cb3fb9691 542 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 522 3.3E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM240 030d49d82b7b7c5997fc392cb3fb9691 542 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 250 2.2E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM240 030d49d82b7b7c5997fc392cb3fb9691 542 Gene3D G3DSA:1.10.3720.10 280 536 1.9E-30 T 11-10-2018 IPR035906 MetI-like superfamily AM240 030d49d82b7b7c5997fc392cb3fb9691 542 SUPERFAMILY SSF161098 285 523 3.55E-29 T 11-10-2018 IPR035906 MetI-like superfamily AM769 b072aef0a2f0ea69d0692ef8c28dfa9f 515 Pfam PF01039 Carboxyl transferase domain 32 513 3.0E-188 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 AM769 b072aef0a2f0ea69d0692ef8c28dfa9f 515 Gene3D G3DSA:3.90.226.10 6 260 1.2E-90 T 11-10-2018 AM769 b072aef0a2f0ea69d0692ef8c28dfa9f 515 Gene3D G3DSA:3.90.226.10 264 515 6.1E-90 T 11-10-2018 AM769 b072aef0a2f0ea69d0692ef8c28dfa9f 515 SUPERFAMILY SSF52096 229 515 9.12E-89 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM769 b072aef0a2f0ea69d0692ef8c28dfa9f 515 SUPERFAMILY SSF52096 10 255 2.28E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 SUPERFAMILY SSF103491 8 414 4.84E-109 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 416 2.7E-108 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PIRSF PIRSF004557 6 430 5.5E-111 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 ProSitePatterns PS00756 Protein secY signature 2. 166 183 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 Pfam PF00344 SecY translocase 68 406 9.5E-97 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 15 33 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 360 378 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 108 131 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 392 410 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 265 284 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 PRINTS PR00303 Preprotein translocase SecY subunit signature 305 327 2.1E-81 T 11-10-2018 AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 423 25.498 T 11-10-2018 IPR026593 Protein translocase subunit SecY AM892 f77761c5b712bf43e6a6aa9651c47a5d 433 Gene3D G3DSA:1.10.3370.10 5 419 1.4E-133 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM680 7a3a00e16a522a4d95403f999ff81b07 238 Pfam PF02565 Recombination protein O C terminal 80 221 9.3E-16 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM680 7a3a00e16a522a4d95403f999ff81b07 238 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 125 231 4.0E-56 T 11-10-2018 AM680 7a3a00e16a522a4d95403f999ff81b07 238 Pfam PF11967 Recombination protein O N terminal 1 66 6.1E-8 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal AM680 7a3a00e16a522a4d95403f999ff81b07 238 Hamap MF_00201 DNA repair protein RecO [recO]. 1 236 14.453 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM680 7a3a00e16a522a4d95403f999ff81b07 238 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 193 1.9E-22 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 AM680 7a3a00e16a522a4d95403f999ff81b07 238 SUPERFAMILY SSF57863 79 173 4.71E-9 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger AM487 f0a36baa0e9296b721443238fc4d869c 343 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 59 283 1.1E-53 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 AM487 f0a36baa0e9296b721443238fc4d869c 343 SUPERFAMILY SSF53335 11 339 3.03E-100 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM487 f0a36baa0e9296b721443238fc4d869c 343 Gene3D G3DSA:3.40.50.12710 4 343 9.4E-94 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 AM841 5327ce487cbf2443902f934c52f1706d 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 15 144 1.1E-20 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 AM841 5327ce487cbf2443902f934c52f1706d 158 SUPERFAMILY SSF55961 8 152 5.09E-26 T 11-10-2018 AM841 5327ce487cbf2443902f934c52f1706d 158 Gene3D G3DSA:3.30.530.20 6 153 7.3E-32 T 11-10-2018 IPR023393 START-like domain superfamily AM1174 786afba0af49aaf23c4c0cab48190e95 507 SUPERFAMILY SSF52540 97 379 1.72E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1174 786afba0af49aaf23c4c0cab48190e95 507 Gene3D G3DSA:1.20.150.20 381 507 2.0E-40 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1174 786afba0af49aaf23c4c0cab48190e95 507 SUPERFAMILY SSF50615 11 94 3.66E-23 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM1174 786afba0af49aaf23c4c0cab48190e95 507 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM1174 786afba0af49aaf23c4c0cab48190e95 507 PIRSF PIRSF039088 2 507 3.5E-239 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1174 786afba0af49aaf23c4c0cab48190e95 507 Gene3D G3DSA:3.40.50.300 95 380 3.0E-127 T 11-10-2018 AM1174 786afba0af49aaf23c4c0cab48190e95 507 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 93 7.9E-12 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM1174 786afba0af49aaf23c4c0cab48190e95 507 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 373 1.4E-73 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM1174 786afba0af49aaf23c4c0cab48190e95 507 SUPERFAMILY SSF47917 382 507 1.7E-38 T 11-10-2018 AM1174 786afba0af49aaf23c4c0cab48190e95 507 Gene3D G3DSA:2.40.30.20 3 94 1.5E-26 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM1174 786afba0af49aaf23c4c0cab48190e95 507 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 506 3.4E-227 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1174 786afba0af49aaf23c4c0cab48190e95 507 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 380 502 1.9E-39 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1174 786afba0af49aaf23c4c0cab48190e95 507 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 504 46.856 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM744 a613ed2ad47840593126a9b0d564041f 481 Pfam PF00361 Proton-conducting membrane transporter 121 403 7.4E-52 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM744 a613ed2ad47840593126a9b0d564041f 481 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 463 14.267 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 Gene3D G3DSA:3.20.19.10 662 893 1.1E-88 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 ProSitePatterns PS01244 Aconitase family signature 2. 498 511 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 Gene3D G3DSA:1.10.1440.20 596 656 5.2E-16 T 11-10-2018 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 236 251 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 312 325 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 222 235 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 193 201 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 298 311 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 391 405 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 169 182 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 436 447 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 PRINTS PR00415 Aconitase family signature 498 511 4.8E-37 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 SUPERFAMILY SSF53732 28 631 6.15E-212 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 SUPERFAMILY SSF52016 636 891 8.04E-73 T 11-10-2018 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 44 892 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 Pfam PF00694 Aconitase C-terminal domain 699 826 1.5E-41 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 Gene3D G3DSA:3.30.499.20 29 391 5.0E-151 T 11-10-2018 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 ProSitePatterns PS00450 Aconitase family signature 1. 432 448 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 Pfam PF00330 Aconitase family (aconitate hydratase) 101 567 4.3E-172 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 AM1032 7b52d5836b665d11c4f965e76a7f7c8d 901 Gene3D G3DSA:3.30.499.10 392 595 2.3E-87 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 Pfam PF00588 SpoU rRNA Methylase family 110 249 6.5E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 SMART SM00967 12 89 2.3E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 13 251 5.4E-55 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 12 86 8.0E-9 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 SUPERFAMILY SSF75217 105 255 3.34E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 Gene3D G3DSA:3.40.1280.10 92 254 1.5E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM915 7a53c1cab708f011dcbe41fbf7b2ab59 261 SUPERFAMILY SSF55315 7 85 9.77E-12 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Pfam PF03764 Elongation factor G, domain IV 479 597 3.5E-41 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SUPERFAMILY SSF50447 264 404 4.35E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SUPERFAMILY SSF54980 402 480 1.98E-22 T 11-10-2018 IPR035647 EF-G domain III/V-like AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Gene3D G3DSA:3.30.70.870 406 483 1.9E-29 T 11-10-2018 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 690 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Pfam PF00679 Elongation factor G C-terminus 600 686 1.3E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Gene3D G3DSA:3.30.70.240 604 674 8.6E-85 T 11-10-2018 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Pfam PF03144 Elongation factor Tu domain 2 324 391 2.8E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SMART SM00889 480 598 1.1E-61 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.0E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 106.077 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Gene3D G3DSA:2.40.30.10 292 405 6.1E-41 T 11-10-2018 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SMART SM00838 600 687 1.5E-47 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SUPERFAMILY SSF52540 6 281 7.65E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Pfam PF14492 Elongation Factor G, domain II 404 477 9.3E-31 T 11-10-2018 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 2.5E-69 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SUPERFAMILY SSF54980 600 688 2.21E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Gene3D G3DSA:3.40.50.300 3 291 4.6E-111 T 11-10-2018 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM253 d7962e8e64fd34d236be8c1f8eb93797 690 SUPERFAMILY SSF54211 479 599 7.84E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM253 d7962e8e64fd34d236be8c1f8eb93797 690 Gene3D G3DSA:3.30.230.10 484 686 8.6E-85 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM600 0cf84b5d4350471692d4f00371ccf8ba 431 SMART SM01193 16 146 9.3E-81 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 SMART SM01192 151 429 2.6E-185 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 SUPERFAMILY SSF54826 15 148 7.41E-51 T 11-10-2018 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 ProSitePatterns PS00164 Enolase signature. 344 357 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 16 427 6.1E-188 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PRINTS PR00148 Enolase signature 321 332 2.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PRINTS PR00148 Enolase signature 49 63 2.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PRINTS PR00148 Enolase signature 373 390 2.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PRINTS PR00148 Enolase signature 344 358 2.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PRINTS PR00148 Enolase signature 119 135 2.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PRINTS PR00148 Enolase signature 173 186 2.3E-43 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 154 425 4.3E-115 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 Hamap MF_00318 Enolase [eno]. 14 421 42.642 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 Pfam PF03952 Enolase, N-terminal domain 16 146 2.3E-54 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM600 0cf84b5d4350471692d4f00371ccf8ba 431 SUPERFAMILY SSF51604 152 429 1.98E-114 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM600 0cf84b5d4350471692d4f00371ccf8ba 431 Gene3D G3DSA:3.30.390.10 13 139 9.8E-50 T 11-10-2018 IPR029017 Enolase-like, N-terminal AM600 0cf84b5d4350471692d4f00371ccf8ba 431 Gene3D G3DSA:3.20.20.120 140 430 4.6E-124 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily AM600 0cf84b5d4350471692d4f00371ccf8ba 431 PIRSF PIRSF001400 12 430 3.2E-180 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 Pfam PF02811 PHP domain 8 169 1.8E-24 T 11-10-2018 IPR004013 PHP domain GO:0003824 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 Gene3D G3DSA:3.20.20.140 3 264 1.6E-69 T 11-10-2018 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 SMART SM00481 7 74 1.4E-18 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal AM287 b99eba704e7eadde31b48b1c388efa2e 1127 SUPERFAMILY SSF89550 6 258 5.69E-14 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 287 715 4.3E-167 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 Pfam PF14579 Helix-hairpin-helix motif 788 875 1.7E-21 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1000 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM287 b99eba704e7eadde31b48b1c388efa2e 1127 Gene3D G3DSA:1.10.10.1600 424 499 2.7E-25 T 11-10-2018 AM870 15f364488ef3cc00007f5c3711db4156 347 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 11 333 1.8E-89 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM870 15f364488ef3cc00007f5c3711db4156 347 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 347 119.066 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM870 15f364488ef3cc00007f5c3711db4156 347 SUPERFAMILY SSF53659 10 334 3.95E-86 T 11-10-2018 AM870 15f364488ef3cc00007f5c3711db4156 347 Pfam PF02504 Fatty acid synthesis protein 9 334 9.9E-90 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 AM870 15f364488ef3cc00007f5c3711db4156 347 PIRSF PIRSF002465 7 346 1.4E-103 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 AM870 15f364488ef3cc00007f5c3711db4156 347 Gene3D G3DSA:3.40.718.10 8 346 4.5E-106 T 11-10-2018 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Gene3D G3DSA:1.10.1780.10 2 147 2.5E-25 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 764 842 2.7E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 SUPERFAMILY SSF52540 160 523 8.26E-99 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Gene3D G3DSA:3.40.50.300 345 542 6.7E-70 T 11-10-2018 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 SMART SM01086 764 853 4.2E-29 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 SMART SM00382 199 344 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 SMART SM00382 595 738 6.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Pfam PF07724 AAA domain (Cdc48 subfamily) 594 758 3.2E-52 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Gene3D G3DSA:1.10.8.60 764 864 2.3E-24 T 11-10-2018 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 337 2.5E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Gene3D G3DSA:3.40.50.300 548 763 7.2E-84 T 11-10-2018 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 SUPERFAMILY SSF52540 545 836 2.33E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 673 691 1.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 644 662 1.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 599 617 1.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 706 720 1.9E-41 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 629 647 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Gene3D G3DSA:3.40.50.300 148 343 2.1E-68 T 11-10-2018 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 8.7E-6 T 11-10-2018 IPR004176 Clp, N-terminal AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 4.4E-5 T 11-10-2018 IPR004176 Clp, N-terminal AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 SUPERFAMILY SSF81923 4 156 5.0E-33 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM949 0fd712ea32e20d097e27e8a1f56a4fe5 872 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 844 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 AM448 14736492e670a7d2098de4279c2fe022 239 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 16 231 5.5E-34 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM448 14736492e670a7d2098de4279c2fe022 239 Gene3D G3DSA:3.20.20.70 9 237 3.9E-70 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM448 14736492e670a7d2098de4279c2fe022 239 SMART SM00934 16 232 1.1E-76 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM448 14736492e670a7d2098de4279c2fe022 239 SUPERFAMILY SSF51366 8 236 2.01E-65 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM448 14736492e670a7d2098de4279c2fe022 239 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 18 232 5.2E-48 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM448 14736492e670a7d2098de4279c2fe022 239 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 237 30.073 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM448 14736492e670a7d2098de4279c2fe022 239 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM488 4a47347b9b6d2102c9d62253f88855cc 612 SMART SM00493 253 324 4.5E-8 T 11-10-2018 IPR006171 TOPRIM domain AM488 4a47347b9b6d2102c9d62253f88855cc 612 TIGRFAM TIGR01391 dnaG: DNA primase 17 416 4.4E-108 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AM488 4a47347b9b6d2102c9d62253f88855cc 612 SUPERFAMILY SSF57783 16 107 5.27E-30 T 11-10-2018 AM488 4a47347b9b6d2102c9d62253f88855cc 612 Pfam PF13662 Toprim domain 254 321 1.3E-13 T 11-10-2018 IPR006171 TOPRIM domain AM488 4a47347b9b6d2102c9d62253f88855cc 612 SUPERFAMILY SSF56731 117 423 3.66E-85 T 11-10-2018 AM488 4a47347b9b6d2102c9d62253f88855cc 612 PIRSF PIRSF002811 10 607 4.8E-139 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM488 4a47347b9b6d2102c9d62253f88855cc 612 Gene3D G3DSA:3.90.980.10 113 234 5.3E-29 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily AM488 4a47347b9b6d2102c9d62253f88855cc 612 SMART SM00400 44 98 3.0E-29 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM488 4a47347b9b6d2102c9d62253f88855cc 612 Gene3D G3DSA:3.40.1360.10 235 360 1.5E-30 T 11-10-2018 AM488 4a47347b9b6d2102c9d62253f88855cc 612 Hamap MF_00974 DNA primase [dnaG]. 11 607 23.115 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AM488 4a47347b9b6d2102c9d62253f88855cc 612 Pfam PF08275 DNA primase catalytic core, N-terminal domain 127 245 3.6E-32 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal AM488 4a47347b9b6d2102c9d62253f88855cc 612 Pfam PF01807 CHC2 zinc finger 15 107 6.3E-32 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AM488 4a47347b9b6d2102c9d62253f88855cc 612 Gene3D G3DSA:3.90.580.10 10 109 3.2E-32 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 AM590 0006f73bd6d2088893c65257f3fdad3f 231 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 28 154 22.984 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 AM590 0006f73bd6d2088893c65257f3fdad3f 231 SUPERFAMILY SSF50685 59 151 3.0E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily AM590 0006f73bd6d2088893c65257f3fdad3f 231 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 64 158 1.2E-40 T 11-10-2018 IPR012997 Rare lipoprotein A AM590 0006f73bd6d2088893c65257f3fdad3f 231 Gene3D G3DSA:2.40.40.10 62 154 1.5E-34 T 11-10-2018 IPR036908 RlpA-like domain superfamily AM590 0006f73bd6d2088893c65257f3fdad3f 231 Pfam PF03330 Lytic transglycolase 64 151 1.1E-22 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Pfam PF07498 Rho termination factor, N-terminal domain 38 76 5.8E-7 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 SUPERFAMILY SSF50249 84 155 2.46E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 SMART SM00959 38 80 1.7E-9 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 SMART SM00382 206 386 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 SUPERFAMILY SSF52540 124 407 4.34E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Gene3D G3DSA:1.10.720.10 33 79 1.2E-8 T 11-10-2018 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Pfam PF07497 Rho termination factor, RNA-binding domain 86 156 2.1E-25 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Gene3D G3DSA:2.40.50.140 80 156 1.1E-27 T 11-10-2018 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Hamap MF_01884 Transcription termination factor Rho [rho]. 34 454 204.696 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 SUPERFAMILY SSF68912 34 79 1.22E-7 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 TIGRFAM TIGR00767 rho: transcription termination factor Rho 36 453 5.6E-193 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Gene3D G3DSA:3.40.50.300 163 453 1.5E-123 T 11-10-2018 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 195 399 1.6E-27 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM051 f6d53936f4cce87818dc7f1fd4b5c77a 454 SMART SM00357 85 151 4.7E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AM846 427869b59e1f0f42eb320a5f01578393 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 104 2.8E-19 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AM1338 70d1a07b2d70c815eebc5f60730960e6 469 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 15 462 1.6E-139 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM1338 70d1a07b2d70c815eebc5f60730960e6 469 Pfam PF00156 Phosphoribosyl transferase domain 286 385 6.9E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM1338 70d1a07b2d70c815eebc5f60730960e6 469 SUPERFAMILY SSF53271 248 467 1.84E-69 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AM1338 70d1a07b2d70c815eebc5f60730960e6 469 Gene3D G3DSA:3.60.20.10 15 463 1.2E-142 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM1338 70d1a07b2d70c815eebc5f60730960e6 469 PIRSF PIRSF000485 11 469 2.1E-156 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM1338 70d1a07b2d70c815eebc5f60730960e6 469 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 14 461 42.861 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 AM1338 70d1a07b2d70c815eebc5f60730960e6 469 Pfam PF13537 Glutamine amidotransferase domain 85 210 2.2E-21 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain AM1338 70d1a07b2d70c815eebc5f60730960e6 469 SUPERFAMILY SSF56235 15 252 9.44E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM1338 70d1a07b2d70c815eebc5f60730960e6 469 Gene3D G3DSA:3.40.50.2020 273 439 1.2E-142 T 11-10-2018 AM829 8eda45d3a634f1575eac88ad3c1fac88 307 SUPERFAMILY SSF52317 64 273 1.83E-11 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM829 8eda45d3a634f1575eac88ad3c1fac88 307 Pfam PF07722 Peptidase C26 71 270 2.9E-4 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AM829 8eda45d3a634f1575eac88ad3c1fac88 307 Gene3D G3DSA:3.40.50.880 69 285 6.5E-11 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM1086 cca5767931f8b29be51490518846a878 265 Pfam PF00557 Metallopeptidase family M24 16 246 2.5E-50 T 11-10-2018 IPR000994 Peptidase M24 AM1086 cca5767931f8b29be51490518846a878 265 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM1086 cca5767931f8b29be51490518846a878 265 Gene3D G3DSA:3.90.230.10 4 264 5.5E-105 T 11-10-2018 AM1086 cca5767931f8b29be51490518846a878 265 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 253 1.3E-91 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM1086 cca5767931f8b29be51490518846a878 265 Hamap MF_01974 Methionine aminopeptidase [map]. 7 255 40.029 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM1086 cca5767931f8b29be51490518846a878 265 SUPERFAMILY SSF55920 7 257 2.09E-83 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AM1086 cca5767931f8b29be51490518846a878 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM1086 cca5767931f8b29be51490518846a878 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM1086 cca5767931f8b29be51490518846a878 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 72 85 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM1086 cca5767931f8b29be51490518846a878 265 PRINTS PR00599 Methionine aminopeptidase-1 signature 94 110 1.1E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 AM783 40458c42fc03a662e2b23d2ee49e0bb8 406 PIRSF PIRSF038885 6 406 6.3E-192 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 AM783 40458c42fc03a662e2b23d2ee49e0bb8 406 Pfam PF00033 Cytochrome b/b6/petB 32 218 2.6E-80 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AM783 40458c42fc03a662e2b23d2ee49e0bb8 406 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 274 375 1.2E-40 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AM783 40458c42fc03a662e2b23d2ee49e0bb8 406 SUPERFAMILY SSF81342 16 276 1.24E-109 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM783 40458c42fc03a662e2b23d2ee49e0bb8 406 SUPERFAMILY SSF81648 277 395 2.4E-41 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 AM783 40458c42fc03a662e2b23d2ee49e0bb8 406 Gene3D G3DSA:1.20.810.10 5 405 1.5E-166 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 AM1296 ffdeae5b85b82314c6a087634e052d44 379 PRINTS PR00625 DnaJ domain signature 7 25 8.0E-31 T 11-10-2018 IPR001623 DnaJ domain AM1296 ffdeae5b85b82314c6a087634e052d44 379 PRINTS PR00625 DnaJ domain signature 25 40 8.0E-31 T 11-10-2018 IPR001623 DnaJ domain AM1296 ffdeae5b85b82314c6a087634e052d44 379 PRINTS PR00625 DnaJ domain signature 42 62 8.0E-31 T 11-10-2018 IPR001623 DnaJ domain AM1296 ffdeae5b85b82314c6a087634e052d44 379 PRINTS PR00625 DnaJ domain signature 62 81 8.0E-31 T 11-10-2018 IPR001623 DnaJ domain AM1296 ffdeae5b85b82314c6a087634e052d44 379 SUPERFAMILY SSF57938 135 212 2.22E-17 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily AM1296 ffdeae5b85b82314c6a087634e052d44 379 SUPERFAMILY SSF49493 119 258 1.96E-16 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM1296 ffdeae5b85b82314c6a087634e052d44 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 353 6.1E-127 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM1296 ffdeae5b85b82314c6a087634e052d44 379 SMART SM00271 4 62 1.5E-32 T 11-10-2018 IPR001623 DnaJ domain AM1296 ffdeae5b85b82314c6a087634e052d44 379 SUPERFAMILY SSF46565 3 105 1.44E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AM1296 ffdeae5b85b82314c6a087634e052d44 379 Gene3D G3DSA:1.10.287.110 2 113 7.8E-39 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AM1296 ffdeae5b85b82314c6a087634e052d44 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 39.03 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AM1296 ffdeae5b85b82314c6a087634e052d44 379 Gene3D G3DSA:2.60.260.20 255 364 2.4E-30 T 11-10-2018 AM1296 ffdeae5b85b82314c6a087634e052d44 379 Pfam PF00684 DnaJ central domain 148 208 3.2E-9 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AM1296 ffdeae5b85b82314c6a087634e052d44 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site AM1296 ffdeae5b85b82314c6a087634e052d44 379 SUPERFAMILY SSF49493 259 347 5.23E-23 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AM1296 ffdeae5b85b82314c6a087634e052d44 379 Gene3D G3DSA:2.10.230.10 148 208 7.8E-30 T 11-10-2018 AM1296 ffdeae5b85b82314c6a087634e052d44 379 Gene3D G3DSA:2.60.260.20 118 250 7.8E-30 T 11-10-2018 AM1296 ffdeae5b85b82314c6a087634e052d44 379 Pfam PF01556 DnaJ C terminal domain 122 336 2.6E-40 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal AM1296 ffdeae5b85b82314c6a087634e052d44 379 Pfam PF00226 DnaJ domain 5 67 4.0E-29 T 11-10-2018 IPR001623 DnaJ domain AM138 8c091691b56abd463bdaccd45ffe8645 430 Pfam PF13393 Histidyl-tRNA synthetase 11 310 2.4E-39 T 11-10-2018 AM138 8c091691b56abd463bdaccd45ffe8645 430 SUPERFAMILY SSF55681 6 314 3.83E-89 T 11-10-2018 AM138 8c091691b56abd463bdaccd45ffe8645 430 Gene3D G3DSA:3.40.50.800 320 418 5.9E-18 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AM138 8c091691b56abd463bdaccd45ffe8645 430 Pfam PF03129 Anticodon binding domain 324 411 2.4E-13 T 11-10-2018 IPR004154 Anticodon-binding AM138 8c091691b56abd463bdaccd45ffe8645 430 SUPERFAMILY SSF52954 321 410 8.67E-19 T 11-10-2018 AM138 8c091691b56abd463bdaccd45ffe8645 430 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 402 2.6E-129 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM138 8c091691b56abd463bdaccd45ffe8645 430 PIRSF PIRSF001549 3 413 4.2E-107 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 AM138 8c091691b56abd463bdaccd45ffe8645 430 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 415 28.997 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 AM138 8c091691b56abd463bdaccd45ffe8645 430 Gene3D G3DSA:3.30.930.10 3 319 3.2E-102 T 11-10-2018 AM1098 9eb8db45ccc1e3df7ac93aa00b542a47 147 SUPERFAMILY SSF54637 4 146 2.96E-44 T 11-10-2018 IPR029069 HotDog domain superfamily AM1098 9eb8db45ccc1e3df7ac93aa00b542a47 147 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 146 2.6E-51 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM1098 9eb8db45ccc1e3df7ac93aa00b542a47 147 Gene3D G3DSA:3.10.129.10 1 147 2.1E-58 T 11-10-2018 AM1098 9eb8db45ccc1e3df7ac93aa00b542a47 147 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 5 147 30.752 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM1098 9eb8db45ccc1e3df7ac93aa00b542a47 147 Pfam PF07977 FabA-like domain 14 140 6.9E-32 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM870.5 d54cba74613b0036c298adbff6bf792a 58 Pfam PF01783 Ribosomal L32p protein family 2 55 2.7E-25 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM870.5 d54cba74613b0036c298adbff6bf792a 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 2 54 18.456 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM870.5 d54cba74613b0036c298adbff6bf792a 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 7.7E-25 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM870.5 d54cba74613b0036c298adbff6bf792a 58 SUPERFAMILY SSF57829 2 55 3.11E-21 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM297 150f1cca3c7a422e6e204b693674ff56 450 Pfam PF01594 AI-2E family transporter 101 434 2.3E-45 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 SUPERFAMILY SSF63380 95 198 1.7E-31 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 2.6E-55 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 SUPERFAMILY SSF63380 1 92 4.08E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 PIRSF PIRSF000498 1 205 1.8E-63 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 Gene3D G3DSA:2.40.30.20 103 205 1.5E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 Gene3D G3DSA:2.40.30.20 1 89 2.0E-21 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 Pfam PF00677 Lumazine binding domain 101 185 3.5E-22 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM120 bd7a5b89f3328a2916ffeb099a59b62a 205 Pfam PF00677 Lumazine binding domain 3 86 2.0E-18 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 SUPERFAMILY SSF82693 42 129 2.54E-16 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:3.30.2090.10 178 269 2.2E-212 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:3.30.2090.10 709 797 2.2E-212 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 SUPERFAMILY SSF82866 792 1027 7.85E-36 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:3.30.70.1440 661 854 2.2E-212 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:1.20.1640.10 14 503 2.2E-212 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.6E-27 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:3.30.70.1430 41 805 2.2E-212 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:3.30.70.1430 564 660 2.2E-212 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:1.20.1640.10 504 1021 2.2E-212 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Gene3D G3DSA:3.30.70.1320 133 322 2.2E-212 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 SUPERFAMILY SSF82866 288 488 8.76E-38 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 SUPERFAMILY SSF82693 136 322 1.92E-12 T 11-10-2018 AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 SUPERFAMILY SSF82714 185 264 1.96E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AM738 b20ebdbdf2df8f57d9b8291916dd6d7a 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1022 4.0E-148 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 AM179 91737b19d1290773d739a6f696ed5f90 299 SUPERFAMILY SSF53223 3 121 3.07E-40 T 11-10-2018 AM179 91737b19d1290773d739a6f696ed5f90 299 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 2.9E-39 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 SUPERFAMILY SSF51735 122 280 2.02E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM179 91737b19d1290773d739a6f696ed5f90 299 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 282 6.6E-63 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 242 258 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 259 277 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.3E-79 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 286 37.347 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 Gene3D G3DSA:3.40.50.10860 7 279 5.0E-105 T 11-10-2018 AM179 91737b19d1290773d739a6f696ed5f90 299 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 263 271 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 AM179 91737b19d1290773d739a6f696ed5f90 299 Gene3D G3DSA:3.40.50.720 5 262 5.0E-105 T 11-10-2018 AM723 724f417bda4b8971d97243d51bf6d0bf 132 Pfam PF04956 TrbC/VIRB2 family 5 102 3.1E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM881 74ce3a79743ba4b26077310126b46925 119 Gene3D G3DSA:3.30.230.10 2 115 5.6E-20 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM881 74ce3a79743ba4b26077310126b46925 119 SUPERFAMILY SSF54211 2 114 1.77E-19 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM881 74ce3a79743ba4b26077310126b46925 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 3 110 3.7E-13 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM881 74ce3a79743ba4b26077310126b46925 119 Pfam PF00825 Ribonuclease P 3 111 7.9E-19 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AM1092 03ed81be0433d5bc5f7a75aa5218e3bf 409 Pfam PF13899 Thioredoxin-like 294 369 3.0E-11 T 11-10-2018 AM1092 03ed81be0433d5bc5f7a75aa5218e3bf 409 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 12 185 3.5E-7 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AM1092 03ed81be0433d5bc5f7a75aa5218e3bf 409 SUPERFAMILY SSF52833 286 395 3.92E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM1092 03ed81be0433d5bc5f7a75aa5218e3bf 409 Gene3D G3DSA:3.40.30.10 285 400 3.0E-9 T 11-10-2018 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 SUPERFAMILY SSF53597 147 351 6.81E-47 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 320 2.5E-95 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 PIRSF PIRSF006769 1 358 3.3E-131 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 Gene3D G3DSA:3.40.430.10 138 357 4.2E-54 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 SUPERFAMILY SSF53927 4 146 4.42E-43 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 90 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 9.7E-18 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 Pfam PF01872 RibD C-terminal domain 149 349 6.8E-35 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AM015 18ea3ec4c0a9e55b8e15fa84bf1b67aa 371 Gene3D G3DSA:3.40.140.10 1 137 5.3E-42 T 11-10-2018 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 Gene3D G3DSA:1.10.230.10 262 370 4.5E-124 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 ProSitePatterns PS00480 Citrate synthase signature. 297 309 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 Gene3D G3DSA:1.10.580.10 55 394 4.5E-124 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 SUPERFAMILY SSF48256 8 414 8.11E-139 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 Pfam PF00285 Citrate synthase, C-terminal domain 45 407 1.2E-120 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PRINTS PR00143 Citrate synthase signature 235 263 7.9E-47 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PRINTS PR00143 Citrate synthase signature 161 174 7.9E-47 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PRINTS PR00143 Citrate synthase signature 373 387 7.9E-47 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PRINTS PR00143 Citrate synthase signature 213 228 7.9E-47 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PRINTS PR00143 Citrate synthase signature 290 310 7.9E-47 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PRINTS PR00143 Citrate synthase signature 353 369 7.9E-47 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 Gene3D G3DSA:2.20.28.60 1 49 6.5E-13 T 11-10-2018 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 415 7.4E-156 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 AM1187 32d6cd891f84ac4dfe50bbedc010f27e 417 PIRSF PIRSF001369 37 417 2.6E-136 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 119 3.3E-36 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Gene3D G3DSA:1.20.120.430 121 443 3.2E-102 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 SUPERFAMILY SSF52540 73 364 1.12E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Gene3D G3DSA:3.30.1360.120 1 120 3.8E-39 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Gene3D G3DSA:3.40.50.300 215 375 3.2E-102 T 11-10-2018 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 SUPERFAMILY SSF116878 120 443 1.03E-45 T 11-10-2018 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Pfam PF01926 50S ribosome-binding GTPase 216 302 1.7E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 443 31.049 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 Pfam PF12631 MnmE helical domain 122 440 4.0E-51 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 443 1.9E-93 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 AM1332 08da560adb98d36a3b7d2b7a5d452a7d 443 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 334 5.0E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM734 56a16b705876490d5517597e41447dda 117 Pfam PF02033 Ribosome-binding factor A 11 112 2.8E-21 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM734 56a16b705876490d5517597e41447dda 117 SUPERFAMILY SSF89919 9 114 1.96E-23 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily AM734 56a16b705876490d5517597e41447dda 117 Gene3D G3DSA:3.30.300.20 8 117 1.6E-21 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AM734 56a16b705876490d5517597e41447dda 117 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 113 23.457 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM734 56a16b705876490d5517597e41447dda 117 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 100 5.0E-43 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM734 56a16b705876490d5517597e41447dda 117 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 114 4.3E-19 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 AM734 56a16b705876490d5517597e41447dda 117 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AM975 a91150239fc1fe569cab6ea48d441789 234 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 70 198 1.1E-30 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM975 a91150239fc1fe569cab6ea48d441789 234 SUPERFAMILY SSF55083 68 219 4.05E-39 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM975 a91150239fc1fe569cab6ea48d441789 234 Gene3D G3DSA:3.30.70.560 68 226 8.5E-43 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM975 a91150239fc1fe569cab6ea48d441789 234 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 69 198 1.0E-27 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 AM802 4f30228f1fc9fa886e951bf768152cc5 525 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 117 311 1.6E-57 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM802 4f30228f1fc9fa886e951bf768152cc5 525 SUPERFAMILY SSF64158 108 322 2.48E-67 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM802 4f30228f1fc9fa886e951bf768152cc5 525 Pfam PF01676 Metalloenzyme superfamily 36 510 3.0E-68 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AM802 4f30228f1fc9fa886e951bf768152cc5 525 SUPERFAMILY SSF53649 37 522 4.19E-65 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 AM802 4f30228f1fc9fa886e951bf768152cc5 525 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 36 522 5.5E-177 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM802 4f30228f1fc9fa886e951bf768152cc5 525 PIRSF PIRSF001492 30 525 4.0E-187 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM802 4f30228f1fc9fa886e951bf768152cc5 525 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 35 523 43.569 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM802 4f30228f1fc9fa886e951bf768152cc5 525 Gene3D G3DSA:3.40.1450.10 108 324 3.3E-185 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AM802 4f30228f1fc9fa886e951bf768152cc5 525 Gene3D G3DSA:3.40.720.10 37 522 3.3E-185 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 AM116 634962d8646c0181e19c644089eafd6f 272 SUPERFAMILY SSF52833 84 250 8.86E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM116 634962d8646c0181e19c644089eafd6f 272 Gene3D G3DSA:3.40.30.10 86 245 5.6E-44 T 11-10-2018 AM116 634962d8646c0181e19c644089eafd6f 272 Pfam PF13462 Thioredoxin 84 251 3.3E-43 T 11-10-2018 IPR012336 Thioredoxin-like fold AM116 634962d8646c0181e19c644089eafd6f 272 Gene3D G3DSA:1.10.40.80 141 203 5.6E-44 T 11-10-2018 AM847 67470c5d657b813b1e53327c6782a82b 158 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 27 147 2.2E-27 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein AM1188 c7ca09e389431fe25240e36f817ddae9 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 529 46.854 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 AM1188 c7ca09e389431fe25240e36f817ddae9 529 SUPERFAMILY SSF54810 400 529 4.84E-46 T 11-10-2018 AM1188 c7ca09e389431fe25240e36f817ddae9 529 Gene3D G3DSA:3.40.50.620 210 400 6.5E-66 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1188 c7ca09e389431fe25240e36f817ddae9 529 Gene3D G3DSA:3.40.50.880 1 209 2.9E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM1188 c7ca09e389431fe25240e36f817ddae9 529 SUPERFAMILY SSF52317 2 199 1.04E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM1188 c7ca09e389431fe25240e36f817ddae9 529 Gene3D G3DSA:3.30.300.10 401 529 9.5E-48 T 11-10-2018 AM1188 c7ca09e389431fe25240e36f817ddae9 529 SUPERFAMILY SSF52402 195 441 6.17E-47 T 11-10-2018 AM1188 c7ca09e389431fe25240e36f817ddae9 529 Pfam PF00117 Glutamine amidotransferase class-I 6 197 2.5E-36 T 11-10-2018 IPR017926 Glutamine amidotransferase AM1188 c7ca09e389431fe25240e36f817ddae9 529 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 529 6.0E-132 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM1188 c7ca09e389431fe25240e36f817ddae9 529 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 4 201 5.9E-57 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM1188 c7ca09e389431fe25240e36f817ddae9 529 Pfam PF00958 GMP synthase C terminal domain 429 528 6.6E-39 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 AM1188 c7ca09e389431fe25240e36f817ddae9 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.3E-7 T 11-10-2018 AM1188 c7ca09e389431fe25240e36f817ddae9 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.3E-7 T 11-10-2018 AM1188 c7ca09e389431fe25240e36f817ddae9 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.3E-7 T 11-10-2018 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 Pfam PF08264 Anticodon-binding domain of tRNA 628 772 1.1E-30 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 63 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 Hamap MF_02005 Valine--tRNA ligase [valS]. 12 802 28.781 T 11-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 SUPERFAMILY SSF47323 601 808 2.62E-43 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 Gene3D G3DSA:3.40.50.620 32 550 1.4E-227 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1170 1f9c22027898a060bc502c8bd13b25fa 823 Gene3D G3DSA:1.10.730.10 13 760 1.4E-227 T 11-10-2018 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 TIGRFAM TIGR00422 valS: valine--tRNA ligase 14 817 1.9E-212 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 587 1.5E-117 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 Gene3D G3DSA:3.90.740.10 181 356 1.4E-227 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 SUPERFAMILY SSF50677 199 355 3.14E-39 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 SUPERFAMILY SSF52374 7 595 7.15E-112 T 11-10-2018 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 PRINTS PR00986 Valyl-tRNA synthetase signature 45 56 2.7E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 PRINTS PR00986 Valyl-tRNA synthetase signature 360 373 2.7E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 PRINTS PR00986 Valyl-tRNA synthetase signature 467 488 2.7E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 PRINTS PR00986 Valyl-tRNA synthetase signature 501 519 2.7E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM1170 1f9c22027898a060bc502c8bd13b25fa 823 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 2.7E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 AM1180 580b4f6e220a8d5b9d38f3888ac1872d 412 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 226 279 1.5E-6 T 11-10-2018 AM1180 580b4f6e220a8d5b9d38f3888ac1872d 412 SUPERFAMILY SSF48452 226 373 6.01E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM1180 580b4f6e220a8d5b9d38f3888ac1872d 412 Gene3D G3DSA:1.25.40.10 218 376 7.3E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM235 36366041c36a42c1ed341cd20def7c22 338 SUPERFAMILY SSF53850 21 333 3.57E-54 T 11-10-2018 AM235 36366041c36a42c1ed341cd20def7c22 338 Gene3D G3DSA:3.40.190.10 107 277 8.1E-43 T 11-10-2018 AM235 36366041c36a42c1ed341cd20def7c22 338 Pfam PF12849 PBP superfamily domain 18 301 2.0E-29 T 11-10-2018 IPR024370 PBP domain AM235 36366041c36a42c1ed341cd20def7c22 338 Gene3D G3DSA:3.40.190.10 23 304 8.1E-43 T 11-10-2018 AM1131 d865799041432a52fb41028406813a1c 488 SMART SM01329 9 340 2.4E-136 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM1131 d865799041432a52fb41028406813a1c 488 Gene3D G3DSA:3.40.718.10 3 365 2.5E-118 T 11-10-2018 AM1131 d865799041432a52fb41028406813a1c 488 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 231 250 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 AM1131 d865799041432a52fb41028406813a1c 488 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 8 480 1.5E-224 T 11-10-2018 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 AM1131 d865799041432a52fb41028406813a1c 488 Gene3D G3DSA:3.30.70.1570 374 484 8.2E-12 T 11-10-2018 AM1131 d865799041432a52fb41028406813a1c 488 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 10 340 5.4E-84 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 AM1131 d865799041432a52fb41028406813a1c 488 SUPERFAMILY SSF53659 5 344 1.66E-109 T 11-10-2018 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 SMART SM00478 36 183 1.0E-53 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 166 3.7E-21 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 Gene3D G3DSA:1.10.340.30 19 130 7.5E-73 T 11-10-2018 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 Pfam PF00633 Helix-hairpin-helix motif 98 124 1.3E-5 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 Gene3D G3DSA:1.10.1670.10 10 201 7.5E-73 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 Hamap MF_00942 Endonuclease III [nth]. 1 207 35.778 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 PIRSF PIRSF001435 2 209 4.0E-45 T 11-10-2018 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 SMART SM00525 184 204 5.3E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 TIGRFAM TIGR01083 nth: endonuclease III 7 192 6.1E-78 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 AM373 b4a09fef6b968a9de82a4b59e6ce26ba 210 SUPERFAMILY SSF48150 9 205 8.01E-67 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 80 636 18.847 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 Gene3D G3DSA:2.70.98.90 141 415 2.2E-30 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 80 436 1.4E-80 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 Pfam PF14849 YidC periplasmic domain 142 427 1.8E-70 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 Pfam PF02096 60Kd inner membrane protein 438 634 4.0E-53 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR01900 YidC translocation/secretion protein signature 423 439 2.5E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR01900 YidC translocation/secretion protein signature 569 584 2.5E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR01900 YidC translocation/secretion protein signature 589 613 2.5E-15 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 437 634 2.6E-60 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.5E-14 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR00701 60kDa inner membrane protein signature 326 341 1.5E-14 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR00701 60kDa inner membrane protein signature 408 428 1.5E-14 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM460 278aabe59e08a6fc68c6edf65b1f27cf 647 PRINTS PR00701 60kDa inner membrane protein signature 148 169 1.5E-14 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 AM824 c34d13916e8b714e0d8edb0988db581d 662 SMART SM00878 339 446 2.1E-51 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM824 c34d13916e8b714e0d8edb0988db581d 662 SUPERFAMILY SSF56059 86 351 1.94E-68 T 11-10-2018 AM824 c34d13916e8b714e0d8edb0988db581d 662 SUPERFAMILY SSF51246 334 449 6.28E-38 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM824 c34d13916e8b714e0d8edb0988db581d 662 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 615 632 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM824 c34d13916e8b714e0d8edb0988db581d 662 Gene3D G3DSA:2.40.50.100 591 658 1.3E-18 T 11-10-2018 AM824 c34d13916e8b714e0d8edb0988db581d 662 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 1.0E-74 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM824 c34d13916e8b714e0d8edb0988db581d 662 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM824 c34d13916e8b714e0d8edb0988db581d 662 Gene3D G3DSA:3.30.470.130 1 450 8.2E-192 T 11-10-2018 AM824 c34d13916e8b714e0d8edb0988db581d 662 Pfam PF00364 Biotin-requiring enzyme 596 657 2.5E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AM824 c34d13916e8b714e0d8edb0988db581d 662 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM824 c34d13916e8b714e0d8edb0988db581d 662 Pfam PF02785 Biotin carboxylase C-terminal domain 339 446 2.2E-36 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM824 c34d13916e8b714e0d8edb0988db581d 662 SUPERFAMILY SSF52440 3 116 2.88E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM824 c34d13916e8b714e0d8edb0988db581d 662 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 113 4.8E-42 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM824 c34d13916e8b714e0d8edb0988db581d 662 SUPERFAMILY SSF51230 586 657 3.14E-18 T 11-10-2018 IPR011053 Single hybrid motif AM275 37a88e5c3ab429315a01954749174b51 196 PIRSF PIRSF004749 2 188 3.7E-32 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 PRINTS PR01576 Peptide deformylase signature 35 64 5.8E-20 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 PRINTS PR01576 Peptide deformylase signature 141 170 5.8E-20 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 PRINTS PR01576 Peptide deformylase signature 109 120 5.8E-20 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 PRINTS PR01576 Peptide deformylase signature 122 140 5.8E-20 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 Hamap MF_00163 Peptide deformylase [def]. 3 187 20.751 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 Pfam PF01327 Polypeptide deformylase 6 170 1.1E-35 T 11-10-2018 IPR023635 Peptide deformylase AM275 37a88e5c3ab429315a01954749174b51 196 SUPERFAMILY SSF56420 14 172 3.01E-39 T 11-10-2018 IPR036821 Peptide deformylase superfamily AM275 37a88e5c3ab429315a01954749174b51 196 Gene3D G3DSA:3.90.45.10 1 186 3.2E-40 T 11-10-2018 IPR036821 Peptide deformylase superfamily AM556 4a1c52405bb5057e4bba18149cf19e02 427 PIRSF PIRSF000521 24 419 5.8E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM556 4a1c52405bb5057e4bba18149cf19e02 427 SUPERFAMILY SSF53383 7 414 6.34E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM556 4a1c52405bb5057e4bba18149cf19e02 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 11 416 2.6E-143 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 AM556 4a1c52405bb5057e4bba18149cf19e02 427 Pfam PF00202 Aminotransferase class-III 26 412 5.9E-108 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM556 4a1c52405bb5057e4bba18149cf19e02 427 Gene3D G3DSA:3.90.1150.10 10 409 1.4E-136 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM556 4a1c52405bb5057e4bba18149cf19e02 427 Gene3D G3DSA:3.40.640.10 59 322 1.4E-136 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM556 4a1c52405bb5057e4bba18149cf19e02 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM1024 5f82a208c183b3f3fe068ecc908bafb0 465 SUPERFAMILY SSF56954 55 462 3.27E-58 T 11-10-2018 AM1024 5f82a208c183b3f3fe068ecc908bafb0 465 Pfam PF02321 Outer membrane efflux protein 82 253 2.4E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM1024 5f82a208c183b3f3fe068ecc908bafb0 465 Pfam PF02321 Outer membrane efflux protein 279 460 5.2E-19 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 AM1024 5f82a208c183b3f3fe068ecc908bafb0 465 Gene3D G3DSA:1.20.1600.10 80 465 7.9E-62 T 11-10-2018 AM792 911c3a06570ee023cf1267d408e169bf 365 Pfam PF00318 Ribosomal protein S2 50 266 6.3E-87 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 Gene3D G3DSA:1.10.287.610 143 193 1.7E-16 T 11-10-2018 AM792 911c3a06570ee023cf1267d408e169bf 365 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 46 266 7.5E-91 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM792 911c3a06570ee023cf1267d408e169bf 365 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 200 224 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 SUPERFAMILY SSF52313 47 270 1.7E-86 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily AM792 911c3a06570ee023cf1267d408e169bf 365 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 43 276 39.053 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM792 911c3a06570ee023cf1267d408e169bf 365 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 47 58 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 PRINTS PR00395 Ribosomal protein S2 signature 238 252 1.3E-33 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 PRINTS PR00395 Ribosomal protein S2 signature 47 65 1.3E-33 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 PRINTS PR00395 Ribosomal protein S2 signature 200 217 1.3E-33 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 PRINTS PR00395 Ribosomal protein S2 signature 130 147 1.3E-33 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM792 911c3a06570ee023cf1267d408e169bf 365 PRINTS PR00395 Ribosomal protein S2 signature 217 228 1.3E-33 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM485 dae9dafcafef8ba75689b61f37fcd981 199 Gene3D G3DSA:3.40.30.10 43 198 1.7E-24 T 11-10-2018 AM485 dae9dafcafef8ba75689b61f37fcd981 199 SUPERFAMILY SSF52833 20 187 7.42E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM485 dae9dafcafef8ba75689b61f37fcd981 199 Pfam PF00578 AhpC/TSA family 63 177 4.5E-10 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM195 f9b1a7d814948100deef91f5b837d145 884 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 758 776 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AM195 f9b1a7d814948100deef91f5b837d145 884 Gene3D G3DSA:3.20.20.60 534 871 3.9E-136 T 11-10-2018 AM195 f9b1a7d814948100deef91f5b837d145 884 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 505 5.6E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AM195 f9b1a7d814948100deef91f5b837d145 884 Gene3D G3DSA:3.30.470.20 247 344 3.5E-40 T 11-10-2018 AM195 f9b1a7d814948100deef91f5b837d145 884 SUPERFAMILY SSF56059 15 382 3.06E-126 T 11-10-2018 AM195 f9b1a7d814948100deef91f5b837d145 884 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AM195 f9b1a7d814948100deef91f5b837d145 884 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 866 1.2E-88 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AM195 f9b1a7d814948100deef91f5b837d145 884 Gene3D G3DSA:3.50.30.10 386 511 5.8E-68 T 11-10-2018 AM195 f9b1a7d814948100deef91f5b837d145 884 Gene3D G3DSA:1.20.80.30 114 199 2.9E-86 T 11-10-2018 AM195 f9b1a7d814948100deef91f5b837d145 884 Gene3D G3DSA:3.30.1490.20 19 246 2.9E-86 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM195 f9b1a7d814948100deef91f5b837d145 884 SUPERFAMILY SSF51621 513 867 3.14E-117 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM195 f9b1a7d814948100deef91f5b837d145 884 SUPERFAMILY SSF52009 391 514 1.31E-33 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 AM195 f9b1a7d814948100deef91f5b837d145 884 PIRSF PIRSF000853 2 876 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM195 f9b1a7d814948100deef91f5b837d145 884 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 5 868 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AM195 f9b1a7d814948100deef91f5b837d145 884 Gene3D G3DSA:1.10.189.10 348 531 5.8E-68 T 11-10-2018 AM195 f9b1a7d814948100deef91f5b837d145 884 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 307 359 3.4E-10 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM195 f9b1a7d814948100deef91f5b837d145 884 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 294 8.7E-41 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site AM230 1b63a0a88d6b130b75d875f890ba1e65 294 Gene3D G3DSA:3.40.50.261 124 289 7.8E-69 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 SMART SM00881 4 100 2.8E-35 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site AM230 1b63a0a88d6b130b75d875f890ba1e65 294 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 41.724 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 SUPERFAMILY SSF52210 123 284 4.84E-51 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 Pfam PF00549 CoA-ligase 151 269 1.2E-17 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 5.3E-36 T 11-10-2018 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 5.3E-36 T 11-10-2018 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 5.3E-36 T 11-10-2018 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 5.3E-36 T 11-10-2018 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 Pfam PF02629 CoA binding domain 6 99 8.2E-30 T 11-10-2018 IPR003781 CoA-binding GO:0048037 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 Gene3D G3DSA:3.40.50.720 2 123 6.3E-50 T 11-10-2018 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 PIRSF PIRSF001553 1 292 5.7E-127 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 3.5E-137 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM230 1b63a0a88d6b130b75d875f890ba1e65 294 SUPERFAMILY SSF51735 1 122 5.42E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM390 4a143035882d1d1684348f9f494d0af2 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 5 74 1.3E-22 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 AM390 4a143035882d1d1684348f9f494d0af2 222 Gene3D G3DSA:1.20.1050.10 79 197 2.1E-82 T 11-10-2018 AM390 4a143035882d1d1684348f9f494d0af2 222 SUPERFAMILY SSF52833 3 103 1.03E-27 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM390 4a143035882d1d1684348f9f494d0af2 222 SUPERFAMILY SSF47616 70 217 1.99E-24 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily AM390 4a143035882d1d1684348f9f494d0af2 222 Pfam PF14497 Glutathione S-transferase, C-terminal domain 135 201 1.3E-5 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal AM390 4a143035882d1d1684348f9f494d0af2 222 Gene3D G3DSA:3.40.30.10 5 222 2.1E-82 T 11-10-2018 AM871 ac535f1c5469a37389a7f40c79f0f43e 420 Gene3D G3DSA:3.20.20.105 2 399 9.0E-145 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM871 ac535f1c5469a37389a7f40c79f0f43e 420 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 12 394 7.9E-121 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM871 ac535f1c5469a37389a7f40c79f0f43e 420 Pfam PF01702 Queuine tRNA-ribosyltransferase 151 392 2.1E-76 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM871 ac535f1c5469a37389a7f40c79f0f43e 420 SUPERFAMILY SSF51713 9 397 1.22E-127 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM871 ac535f1c5469a37389a7f40c79f0f43e 420 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 9 397 45.146 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM871 ac535f1c5469a37389a7f40c79f0f43e 420 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 11 390 1.4E-118 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 258 1.3E-57 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 132 6.5E-35 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 SUPERFAMILY SSF53271 136 259 4.23E-21 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 Gene3D G3DSA:3.40.50.2020 163 259 3.9E-21 T 11-10-2018 AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 SUPERFAMILY SSF53271 4 169 1.25E-35 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 SMART SM01400 4 132 1.7E-38 T 11-10-2018 AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 Pfam PF00156 Phosphoribosyl transferase domain 175 259 8.2E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM1028 5a8d5aa05e16a17f7da7c6d9db5f5eef 259 Gene3D G3DSA:3.40.50.2020 4 162 1.3E-45 T 11-10-2018 AM205 398e1660deef22e43db7946152074614 334 Gene3D G3DSA:3.40.50.20 3 93 3.2E-22 T 11-10-2018 AM205 398e1660deef22e43db7946152074614 334 SUPERFAMILY SSF52440 12 105 6.43E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM205 398e1660deef22e43db7946152074614 334 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 12 309 28.701 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM205 398e1660deef22e43db7946152074614 334 Pfam PF01820 D-ala D-ala ligase N-terminus 14 93 7.8E-13 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM205 398e1660deef22e43db7946152074614 334 PIRSF PIRSF039102 54 316 4.1E-60 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM205 398e1660deef22e43db7946152074614 334 PIRSF PIRSF039102 9 61 7.8E-9 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM205 398e1660deef22e43db7946152074614 334 Gene3D G3DSA:3.30.470.20 95 305 3.4E-50 T 11-10-2018 AM205 398e1660deef22e43db7946152074614 334 SUPERFAMILY SSF56059 105 305 9.93E-42 T 11-10-2018 AM205 398e1660deef22e43db7946152074614 334 Gene3D G3DSA:3.30.1490.20 120 184 3.4E-50 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM205 398e1660deef22e43db7946152074614 334 Pfam PF07478 D-ala D-ala ligase C-terminus 113 306 7.0E-35 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM205 398e1660deef22e43db7946152074614 334 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 72 83 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM508 74f9c188647549f79acff96183d44592 350 Pfam PF07722 Peptidase C26 147 300 1.7E-4 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 AM508 74f9c188647549f79acff96183d44592 350 SUPERFAMILY SSF52317 64 303 9.17E-17 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM508 74f9c188647549f79acff96183d44592 350 Gene3D G3DSA:3.40.50.880 51 312 2.6E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 PRINTS PR00126 ATP synthase gamma subunit signature 161 178 1.2E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.2E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.2E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 PRINTS PR00126 ATP synthase gamma subunit signature 65 84 1.2E-25 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 SUPERFAMILY SSF52943 2 286 2.22E-62 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 Gene3D G3DSA:3.40.1380.10 52 205 2.4E-58 T 11-10-2018 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 Pfam PF00231 ATP synthase 3 286 2.5E-59 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM620 c5de6dabc59c03e7ae9f5227fb57726e 287 Gene3D G3DSA:1.10.287.80 9 282 2.4E-58 T 11-10-2018 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Gene3D G3DSA:2.120.10.90 770 893 1.5E-30 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM372 89925038f64b31eeb3ae77f4f3b62549 908 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 891 0.0 T 11-10-2018 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 495 8.4E-151 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM372 89925038f64b31eeb3ae77f4f3b62549 908 SMART SM00434 14 493 3.1E-249 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 583 631 3.5E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 533 578 6.3E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 691 738 2.1E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 845 891 5.8E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 795 838 9.8E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 0.012 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 SUPERFAMILY SSF101904 527 903 7.59E-94 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM372 89925038f64b31eeb3ae77f4f3b62549 908 Gene3D G3DSA:3.30.1360.40 239 335 1.3E-207 T 11-10-2018 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Gene3D G3DSA:1.10.268.10 372 487 1.3E-207 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM372 89925038f64b31eeb3ae77f4f3b62549 908 SUPERFAMILY SSF56719 33 515 3.79E-167 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Gene3D G3DSA:3.90.199.10 36 515 1.3E-207 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 8 893 22.768 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM372 89925038f64b31eeb3ae77f4f3b62549 908 Gene3D G3DSA:2.120.10.90 524 753 1.2E-67 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 Pfam PF02445 Quinolinate synthetase A protein 18 315 3.2E-113 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 SUPERFAMILY SSF142754 14 316 5.89E-111 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 14 317 7.5E-106 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 Gene3D G3DSA:3.40.50.10800 17 298 6.9E-109 T 11-10-2018 AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 Gene3D G3DSA:3.40.50.10800 97 315 6.9E-109 T 11-10-2018 AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 Hamap MF_00568 Quinolinate synthase A [nadA]. 13 317 42.39 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 AM1307 9f7a811e6b934245e8c9f0a08e50b9ab 318 Gene3D G3DSA:3.40.50.10800 181 273 6.9E-109 T 11-10-2018 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Pfam PF01103 Surface antigen 454 773 2.0E-52 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Gene3D G3DSA:3.10.20.310 26 95 1.2E-11 T 11-10-2018 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 PIRSF PIRSF006076 5 776 1.1E-203 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 5 779 21.023 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Gene3D G3DSA:3.10.20.310 356 430 8.0E-21 T 11-10-2018 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Pfam PF07244 Surface antigen variable number repeat 96 174 4.2E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Pfam PF07244 Surface antigen variable number repeat 355 427 8.8E-13 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Pfam PF07244 Surface antigen variable number repeat 178 268 1.7E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Gene3D G3DSA:2.40.160.50 431 777 3.5E-72 T 11-10-2018 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 776 7.1E-203 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Gene3D G3DSA:3.10.20.310 96 175 2.2E-16 T 11-10-2018 AM1096 c7ff1ffcf29de9522912d29639fcc554 779 Gene3D G3DSA:3.10.20.310 177 271 2.4E-16 T 11-10-2018 AM516 d8c266a1500e29d5f9034182ec446534 670 SUPERFAMILY SSF109998 75 335 1.69E-18 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AM516 d8c266a1500e29d5f9034182ec446534 670 Gene3D G3DSA:1.10.4030.30 72 198 2.7E-7 T 11-10-2018 AM516 d8c266a1500e29d5f9034182ec446534 670 Gene3D G3DSA:3.10.50.40 299 417 1.1E-9 T 11-10-2018 AM516 d8c266a1500e29d5f9034182ec446534 670 Pfam PF13624 SurA N-terminal domain 43 194 1.2E-29 T 11-10-2018 AM516 d8c266a1500e29d5f9034182ec446534 670 SUPERFAMILY SSF54534 307 395 2.04E-10 T 11-10-2018 AM516 d8c266a1500e29d5f9034182ec446534 670 Pfam PF13145 PPIC-type PPIASE domain 312 403 1.1E-10 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 266 286 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 124 141 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 302 321 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 202 228 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 151 173 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 236 256 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 74 100 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 286 302 1.0E-63 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 307 621 3.8E-65 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal AM1169 0311124ef64c710f9f2f7f9da9ef0040 640 Pfam PF01578 Cytochrome C assembly protein 83 287 1.1E-35 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM632 87cff9848b5e5834c23aaf0a05fe3160 104 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 2.0E-11 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AM632 87cff9848b5e5834c23aaf0a05fe3160 104 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 95 5.7E-15 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 AM632 87cff9848b5e5834c23aaf0a05fe3160 104 SUPERFAMILY SSF69754 1 102 1.24E-19 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AM632 87cff9848b5e5834c23aaf0a05fe3160 104 Gene3D G3DSA:3.30.160.100 1 104 1.9E-15 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like AM903 c8707c0b4c10d04e284ef267d776ec2b 77 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 77 18.487 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 PRINTS PR00973 Ribosomal protein S17 family signature 55 65 1.7E-6 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 PRINTS PR00973 Ribosomal protein S17 family signature 23 46 1.7E-6 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 PRINTS PR00973 Ribosomal protein S17 family signature 65 72 1.7E-6 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 SUPERFAMILY SSF50249 6 76 2.27E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM903 c8707c0b4c10d04e284ef267d776ec2b 77 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 2 75 2.0E-27 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 Pfam PF00366 Ribosomal protein S17 9 75 8.6E-22 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 75 6.0E-27 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM903 c8707c0b4c10d04e284ef267d776ec2b 77 Gene3D G3DSA:2.40.50.140 2 77 1.9E-22 T 11-10-2018 AM035 4e469348ccf8192d0368dad2ce3ce8c0 69 Gene3D G3DSA:3.10.20.30 5 69 1.6E-15 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AM035 4e469348ccf8192d0368dad2ce3ce8c0 69 Pfam PF02597 ThiS family 8 69 7.4E-8 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 AM035 4e469348ccf8192d0368dad2ce3ce8c0 69 SUPERFAMILY SSF54285 5 69 1.89E-11 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp AM035 4e469348ccf8192d0368dad2ce3ce8c0 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 7 69 1.0E-14 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis AM281 38021410b48dce6efab823434f218f93 199 Gene3D G3DSA:2.30.110.10 1 199 2.2E-66 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM281 38021410b48dce6efab823434f218f93 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 1.7E-13 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM281 38021410b48dce6efab823434f218f93 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 3 199 34.274 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM281 38021410b48dce6efab823434f218f93 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 199 7.7E-65 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM281 38021410b48dce6efab823434f218f93 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 27 104 1.3E-20 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM281 38021410b48dce6efab823434f218f93 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM281 38021410b48dce6efab823434f218f93 199 PIRSF PIRSF000190 2 199 1.4E-66 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 AM281 38021410b48dce6efab823434f218f93 199 SUPERFAMILY SSF50475 6 199 6.73E-56 T 11-10-2018 AM750 1c5f019d57315a31ae34b93f3fae9497 430 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 46 219 2.1E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 417 6.3E-191 T 11-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 SUPERFAMILY SSF140490 327 421 1.44E-34 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 Gene3D G3DSA:1.20.1440.230 329 430 9.4E-35 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 Pfam PF10531 SLBB domain 242 293 2.4E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 SUPERFAMILY SSF142019 7 240 1.23E-83 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 414 4.9E-28 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 Gene3D G3DSA:3.10.20.600 232 328 3.9E-42 T 11-10-2018 AM750 1c5f019d57315a31ae34b93f3fae9497 430 SMART SM00928 331 376 2.4E-25 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 Gene3D G3DSA:3.40.50.11540 51 231 3.1E-79 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM750 1c5f019d57315a31ae34b93f3fae9497 430 SUPERFAMILY SSF142984 241 326 5.23E-25 T 11-10-2018 AM1146 2815a41c71e0bbd58445907c3582b643 194 PIRSF PIRSF036773 2 194 1.7E-65 T 11-10-2018 IPR035433 NFU1-like AM1146 2815a41c71e0bbd58445907c3582b643 194 Pfam PF01106 NifU-like domain 126 192 2.1E-26 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM1146 2815a41c71e0bbd58445907c3582b643 194 SUPERFAMILY SSF110836 5 94 6.41E-26 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily AM1146 2815a41c71e0bbd58445907c3582b643 194 SUPERFAMILY SSF117916 112 194 1.02E-25 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM1146 2815a41c71e0bbd58445907c3582b643 194 Gene3D G3DSA:3.30.300.130 115 194 4.2E-27 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM1146 2815a41c71e0bbd58445907c3582b643 194 SMART SM00932 8 95 1.4E-39 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal AM1146 2815a41c71e0bbd58445907c3582b643 194 Gene3D G3DSA:3.30.1370.70 2 99 4.5E-26 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily AM1146 2815a41c71e0bbd58445907c3582b643 194 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 134 194 4.0E-29 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 AM1146 2815a41c71e0bbd58445907c3582b643 194 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 8 93 3.1E-25 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 Gene3D G3DSA:2.70.210.12 1 138 2.0E-45 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 ProSitePatterns PS00905 GTP1/OBG family signature. 192 205 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 Pfam PF01926 50S ribosome-binding GTPase 141 260 1.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 Gene3D G3DSA:3.40.50.300 140 316 1.0E-44 T 11-10-2018 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 SUPERFAMILY SSF82051 1 138 6.41E-44 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 PIRSF PIRSF002401 1 317 1.0E-112 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 Hamap MF_01454 GTPase Obg [obg]. 1 305 37.598 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 181 5.8E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 142 162 5.8E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 190 205 5.8E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 225 5.8E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 Pfam PF01018 GTP1/OBG 1 137 1.4E-46 T 11-10-2018 IPR006169 GTP1/OBG domain AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 SUPERFAMILY SSF52540 141 288 2.24E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM858 48bd71d9dc0bc422ac61e01b15d257eb 328 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 1 296 2.4E-117 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM1264 eb8a7fd7739c6987af942dbc29de152e 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 144 8.8E-28 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM1264 eb8a7fd7739c6987af942dbc29de152e 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 147 19.7 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM1264 eb8a7fd7739c6987af942dbc29de152e 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site AM1264 eb8a7fd7739c6987af942dbc29de152e 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 8.8E-30 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AM1264 eb8a7fd7739c6987af942dbc29de152e 154 Gene3D G3DSA:3.40.390.30 1 152 5.3E-35 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 AM1264 eb8a7fd7739c6987af942dbc29de152e 154 SUPERFAMILY SSF55486 22 152 1.15E-36 T 11-10-2018 AM1350 308b45cf8df9b77c2662893d5f37a830 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 7 147 3.7E-47 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AM1350 308b45cf8df9b77c2662893d5f37a830 148 TIGRFAM TIGR00701 TIGR00701: TIGR00701 family protein 8 147 2.8E-41 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AM1350 308b45cf8df9b77c2662893d5f37a830 148 PIRSF PIRSF004638 2 148 2.0E-42 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 AM458 e168dbb195c1d2d2a5225e36b1caaebe 177 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 28 175 22.809 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM458 e168dbb195c1d2d2a5225e36b1caaebe 177 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 34 171 1.1E-28 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM458 e168dbb195c1d2d2a5225e36b1caaebe 177 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 33 172 5.8E-38 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM458 e168dbb195c1d2d2a5225e36b1caaebe 177 Gene3D G3DSA:3.40.50.960 23 177 1.8E-40 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM458 e168dbb195c1d2d2a5225e36b1caaebe 177 SUPERFAMILY SSF52121 24 175 3.4E-42 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM938 0040ad6faecba598ce42442766910c7f 216 SUPERFAMILY SSF102645 3 212 2.88E-57 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM938 0040ad6faecba598ce42442766910c7f 216 Gene3D G3DSA:3.40.50.10300 1 215 3.9E-55 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM938 0040ad6faecba598ce42442766910c7f 216 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 181 2.6E-51 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 AM837 cc67e4071810393c35f3a0632a463e5f 297 Pfam PF01926 50S ribosome-binding GTPase 12 126 1.3E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM837 cc67e4071810393c35f3a0632a463e5f 297 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 164 1.1E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM837 cc67e4071810393c35f3a0632a463e5f 297 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 279 3.3E-60 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM837 cc67e4071810393c35f3a0632a463e5f 297 Gene3D G3DSA:3.40.50.300 3 181 1.2E-38 T 11-10-2018 AM837 cc67e4071810393c35f3a0632a463e5f 297 Pfam PF07650 KH domain 209 285 4.1E-15 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM837 cc67e4071810393c35f3a0632a463e5f 297 SUPERFAMILY SSF52540 9 238 4.73E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM837 cc67e4071810393c35f3a0632a463e5f 297 Hamap MF_00367 GTPase Era [era]. 7 297 27.424 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM837 cc67e4071810393c35f3a0632a463e5f 297 Gene3D G3DSA:3.30.300.20 186 296 9.1E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 SUPERFAMILY SSF50249 66 127 1.54E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Gene3D G3DSA:2.40.50.140 65 128 3.7E-16 T 11-10-2018 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 SMART SM01185 68 122 8.3E-18 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 PIRSF PIRSF005901 1 187 2.6E-60 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Gene3D G3DSA:2.40.50.140 129 187 6.8E-20 T 11-10-2018 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 1.7E-15 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 39.424 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 58 4.2E-20 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 186 3.6E-64 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.6E-20 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 SUPERFAMILY SSF50249 129 186 4.28E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 SUPERFAMILY SSF50104 6 63 1.38E-15 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 Gene3D G3DSA:2.30.30.30 5 63 8.6E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM472 f8c3550906d77b0f880e6d1c73aa4b9d 188 SMART SM00841 130 185 3.0E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 AM873 f6e566e6accda621c065b10a93e48974 280 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 146 278 9.3E-39 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM873 f6e566e6accda621c065b10a93e48974 280 PIRSF PIRSF000161 22 280 3.6E-75 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM873 f6e566e6accda621c065b10a93e48974 280 Gene3D G3DSA:3.40.50.720 27 278 7.0E-80 T 11-10-2018 AM873 f6e566e6accda621c065b10a93e48974 280 SUPERFAMILY SSF51735 24 278 1.05E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM873 f6e566e6accda621c065b10a93e48974 280 SUPERFAMILY SSF55347 145 250 1.44E-27 T 11-10-2018 AM873 f6e566e6accda621c065b10a93e48974 280 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 24 279 28.454 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM873 f6e566e6accda621c065b10a93e48974 280 Gene3D G3DSA:3.30.360.10 145 248 7.0E-80 T 11-10-2018 AM873 f6e566e6accda621c065b10a93e48974 280 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 167 184 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM873 f6e566e6accda621c065b10a93e48974 280 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 24 143 3.1E-26 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM873 f6e566e6accda621c065b10a93e48974 280 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 24 278 7.3E-66 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 SUPERFAMILY SSF90123 11 315 1.44E-52 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 Pfam PF00005 ABC transporter 355 505 3.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 SMART SM00382 364 551 4.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 Gene3D G3DSA:3.40.50.300 327 580 5.7E-89 T 11-10-2018 AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 SUPERFAMILY SSF52540 328 577 3.06E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 Gene3D G3DSA:1.20.1560.10 3 316 1.7E-52 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM167 d21d41dcaf9f0b121b45ec2e61c627d3 582 Pfam PF00664 ABC transporter transmembrane region 21 285 6.4E-34 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM198 b02bc0467e7b4be5f9cd3fa46c1c943b 207 Gene3D G3DSA:3.40.50.1000 7 179 4.7E-47 T 11-10-2018 IPR023214 HAD superfamily AM198 b02bc0467e7b4be5f9cd3fa46c1c943b 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 176 1.0E-25 T 11-10-2018 AM198 b02bc0467e7b4be5f9cd3fa46c1c943b 207 Gene3D G3DSA:1.10.150.730 19 79 4.7E-47 T 11-10-2018 AM198 b02bc0467e7b4be5f9cd3fa46c1c943b 207 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 174 6.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 AM198 b02bc0467e7b4be5f9cd3fa46c1c943b 207 SUPERFAMILY SSF56784 4 181 1.96E-32 T 11-10-2018 IPR036412 HAD-like superfamily AM241 85865eb45b19c41711e8e0934aef5639 512 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 382 1.7E-33 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM241 85865eb45b19c41711e8e0934aef5639 512 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 86 109 1.7E-33 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM241 85865eb45b19c41711e8e0934aef5639 512 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 491 511 1.7E-33 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM241 85865eb45b19c41711e8e0934aef5639 512 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 476 491 1.7E-33 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM241 85865eb45b19c41711e8e0934aef5639 512 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 128 148 1.7E-33 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 AM241 85865eb45b19c41711e8e0934aef5639 512 Pfam PF13437 HlyD family secretion protein 348 425 8.0E-8 T 11-10-2018 AM241 85865eb45b19c41711e8e0934aef5639 512 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 79 512 3.1E-115 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 AM1353 a067117aa1dcdd9b31ecca723ca07295 473 SUPERFAMILY SSF111283 21 469 2.75E-110 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AM1353 a067117aa1dcdd9b31ecca723ca07295 473 Pfam PF01523 Putative modulator of DNA gyrase 34 323 2.5E-54 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM1353 a067117aa1dcdd9b31ecca723ca07295 473 PIRSF PIRSF004919 14 472 1.8E-120 T 11-10-2018 IPR025502 TldD AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 513 1.3E-167 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 513 37.883 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 SMART SM00851 19 131 8.3E-40 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 SMART SM00798 136 449 5.2E-164 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 SUPERFAMILY SSF53927 211 513 1.81E-113 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 SUPERFAMILY SSF52335 8 195 9.77E-56 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 Gene3D G3DSA:3.40.140.20 206 364 1.5E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 448 6.2E-105 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 Gene3D G3DSA:3.40.140.20 383 513 1.9E-52 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 Gene3D G3DSA:3.40.50.1380 2 200 4.2E-69 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 Pfam PF02142 MGS-like domain 20 130 6.1E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AM1099 2ab6801e1ae17fd2da8105fe0a348e3b 513 PIRSF PIRSF000414 1 513 9.9E-203 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 SMART SM00861 591 784 1.2E-61 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM405 84ad62a98f59836a8a3235a252dfaf1a 930 Pfam PF00676 Dehydrogenase E1 component 210 520 4.9E-49 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 Gene3D G3DSA:3.40.50.11610 721 926 8.4E-164 T 11-10-2018 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 789 929 1.6E-45 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 Gene3D G3DSA:3.40.50.12470 555 799 8.4E-164 T 11-10-2018 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 81 928 2.1E-293 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 SUPERFAMILY SSF52518 586 790 2.53E-50 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AM405 84ad62a98f59836a8a3235a252dfaf1a 930 PIRSF PIRSF000157 28 930 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 AM405 84ad62a98f59836a8a3235a252dfaf1a 930 SUPERFAMILY SSF52518 160 536 5.4E-78 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AM405 84ad62a98f59836a8a3235a252dfaf1a 930 Pfam PF02779 Transketolase, pyrimidine binding domain 590 785 6.5E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM405 84ad62a98f59836a8a3235a252dfaf1a 930 Gene3D G3DSA:3.40.50.970 164 525 2.2E-133 T 11-10-2018 AM498 fc520ca1872809514a496c4411b919a5 827 SUPERFAMILY SSF47384 429 500 9.22E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM498 fc520ca1872809514a496c4411b919a5 827 Gene3D G3DSA:3.40.50.2300 699 827 4.9E-26 T 11-10-2018 AM498 fc520ca1872809514a496c4411b919a5 827 SMART SM00387 544 673 1.4E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM498 fc520ca1872809514a496c4411b919a5 827 Pfam PF00512 His Kinase A (phospho-acceptor) domain 439 501 3.1E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM498 fc520ca1872809514a496c4411b919a5 827 Gene3D G3DSA:1.10.287.130 429 502 5.3E-21 T 11-10-2018 AM498 fc520ca1872809514a496c4411b919a5 827 Pfam PF00072 Response regulator receiver domain 709 819 8.2E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM498 fc520ca1872809514a496c4411b919a5 827 SUPERFAMILY SSF55874 493 673 9.82E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM498 fc520ca1872809514a496c4411b919a5 827 Gene3D G3DSA:3.30.565.10 505 676 9.1E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM498 fc520ca1872809514a496c4411b919a5 827 SMART SM00388 437 503 1.2E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM498 fc520ca1872809514a496c4411b919a5 827 SMART SM00448 707 819 1.6E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM498 fc520ca1872809514a496c4411b919a5 827 SUPERFAMILY SSF52172 705 824 9.96E-26 T 11-10-2018 IPR011006 CheY-like superfamily AM498 fc520ca1872809514a496c4411b919a5 827 Pfam PF13426 PAS domain 230 307 0.035 T 11-10-2018 IPR000014 PAS domain AM498 fc520ca1872809514a496c4411b919a5 827 Pfam PF13426 PAS domain 332 382 0.16 T 11-10-2018 IPR000014 PAS domain AM498 fc520ca1872809514a496c4411b919a5 827 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 670 2.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM498 fc520ca1872809514a496c4411b919a5 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 657 670 8.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM498 fc520ca1872809514a496c4411b919a5 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 8.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM498 fc520ca1872809514a496c4411b919a5 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 651 8.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM498 fc520ca1872809514a496c4411b919a5 827 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 8.4E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM839 f9f36b585302b5c399d9117c6acec4a0 451 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 426 7.9E-154 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AM839 f9f36b585302b5c399d9117c6acec4a0 451 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 Pfam PF02978 Signal peptide binding domain 326 426 2.9E-26 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 SUPERFAMILY SSF47446 326 426 2.78E-29 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 Pfam PF00448 SRP54-type protein, GTPase domain 101 294 2.9E-66 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 Gene3D G3DSA:1.10.260.30 312 441 5.8E-36 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 Gene3D G3DSA:1.20.120.140 5 305 3.4E-106 T 11-10-2018 AM839 f9f36b585302b5c399d9117c6acec4a0 451 SMART SM00963 1 86 5.9E-21 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 Pfam PF02881 SRP54-type protein, helical bundle domain 5 80 1.6E-14 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM839 f9f36b585302b5c399d9117c6acec4a0 451 SUPERFAMILY SSF52540 42 353 6.64E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM839 f9f36b585302b5c399d9117c6acec4a0 451 SMART SM00382 99 246 2.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AM839 f9f36b585302b5c399d9117c6acec4a0 451 Gene3D G3DSA:3.40.50.300 90 284 3.4E-106 T 11-10-2018 AM839 f9f36b585302b5c399d9117c6acec4a0 451 SMART SM00962 100 295 6.9E-99 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM416 66fa3271bc14991035d86f2628fe12cd 506 PIRSF PIRSF006630 1 115 2.1E-10 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM416 66fa3271bc14991035d86f2628fe12cd 506 PIRSF PIRSF006630 215 506 4.2E-97 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM416 66fa3271bc14991035d86f2628fe12cd 506 PIRSF PIRSF006630 168 229 7.3E-4 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 AM416 66fa3271bc14991035d86f2628fe12cd 506 SUPERFAMILY SSF52402 233 504 5.59E-69 T 11-10-2018 AM416 66fa3271bc14991035d86f2628fe12cd 506 Gene3D G3DSA:3.60.110.10 2 240 5.7E-16 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM416 66fa3271bc14991035d86f2628fe12cd 506 Pfam PF00795 Carbon-nitrogen hydrolase 6 95 2.7E-5 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 AM416 66fa3271bc14991035d86f2628fe12cd 506 SUPERFAMILY SSF56317 4 218 3.05E-12 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily AM416 66fa3271bc14991035d86f2628fe12cd 506 Gene3D G3DSA:3.40.50.620 241 506 2.9E-94 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM416 66fa3271bc14991035d86f2628fe12cd 506 Pfam PF02540 NAD synthase 242 498 1.2E-71 T 11-10-2018 IPR022310 NAD/GMP synthase AM416 66fa3271bc14991035d86f2628fe12cd 506 TIGRFAM TIGR00552 nadE: NAD+ synthetase 241 499 7.4E-60 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 167 5.5E-44 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 Pfam PF01195 Peptidyl-tRNA hydrolase 3 174 8.2E-46 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 SUPERFAMILY SSF53178 2 179 1.1E-53 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 174 31.09 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AM1339 b7f4b3ed0e7bb2182fad7bc6de7a3cec 186 Gene3D G3DSA:3.40.50.1470 1 181 1.2E-52 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 AM164 ab613123a74a34752a9fa46cb56f917a 430 SUPERFAMILY SSF53383 13 422 6.91E-169 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM164 ab613123a74a34752a9fa46cb56f917a 430 Gene3D G3DSA:3.40.640.10 39 290 3.2E-172 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM164 ab613123a74a34752a9fa46cb56f917a 430 Gene3D G3DSA:3.90.1150.10 13 395 3.2E-172 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM164 ab613123a74a34752a9fa46cb56f917a 430 PIRSF PIRSF000412 5 427 3.1E-164 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM164 ab613123a74a34752a9fa46cb56f917a 430 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 224 240 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM164 ab613123a74a34752a9fa46cb56f917a 430 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 9 423 50.221 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM164 ab613123a74a34752a9fa46cb56f917a 430 Pfam PF00464 Serine hydroxymethyltransferase 13 386 1.5E-160 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 AM426 9a332892bd7e04c7c89e50c4435ccade 485 SUPERFAMILY SSF89095 305 409 5.36E-31 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 AM426 9a332892bd7e04c7c89e50c4435ccade 485 SUPERFAMILY SSF55931 16 304 6.21E-113 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM426 9a332892bd7e04c7c89e50c4435ccade 485 SMART SM00845 336 482 1.8E-72 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AM426 9a332892bd7e04c7c89e50c4435ccade 485 Pfam PF02637 GatB domain 337 482 2.8E-47 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 AM426 9a332892bd7e04c7c89e50c4435ccade 485 Gene3D G3DSA:1.10.10.410 422 484 3.8E-22 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal AM426 9a332892bd7e04c7c89e50c4435ccade 485 Pfam PF02934 GatB/GatE catalytic domain 17 296 4.3E-109 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AM426 9a332892bd7e04c7c89e50c4435ccade 485 Gene3D G3DSA:1.10.150.380 305 421 1.0E-35 T 11-10-2018 AM426 9a332892bd7e04c7c89e50c4435ccade 485 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 14 483 35.336 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AM426 9a332892bd7e04c7c89e50c4435ccade 485 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 152 166 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AM426 9a332892bd7e04c7c89e50c4435ccade 485 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 14 482 2.6E-161 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 281 338 4.6E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 SUPERFAMILY SSF56553 75 203 3.92E-30 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 SMART SM00662 45 259 1.4E-56 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Gene3D G3DSA:2.170.120.12 75 202 2.0E-69 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Gene3D G3DSA:3.30.1360.10 44 253 2.0E-69 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 25 347 33.21 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Gene3D G3DSA:1.10.150.20 277 359 4.2E-36 T 11-10-2018 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 SUPERFAMILY SSF47789 281 356 6.8E-27 T 11-10-2018 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 51 253 1.4E-20 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 46 346 1.7E-94 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 287 356 1.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 SUPERFAMILY SSF55257 29 256 6.08E-26 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM887 815c4f1a68f3a3aacefadaa241f2889f 366 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 84 177 4.0E-15 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM144 cea14b86b9dc56675fca09ad8c5ce4de 208 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM144 cea14b86b9dc56675fca09ad8c5ce4de 208 SMART SM00382 26 202 4.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AM144 cea14b86b9dc56675fca09ad8c5ce4de 208 Pfam PF00005 ABC transporter 18 154 4.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM144 cea14b86b9dc56675fca09ad8c5ce4de 208 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 189 1.4E-49 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 AM144 cea14b86b9dc56675fca09ad8c5ce4de 208 SUPERFAMILY SSF52540 2 191 1.27E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM144 cea14b86b9dc56675fca09ad8c5ce4de 208 Gene3D G3DSA:3.40.50.300 1 198 1.7E-42 T 11-10-2018 AM399 327ceab63f773fe5e4fa206d9c11757f 483 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 33 410 3.3E-147 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 AM399 327ceab63f773fe5e4fa206d9c11757f 483 Gene3D G3DSA:1.10.510.10 239 373 2.3E-6 T 11-10-2018 AM399 327ceab63f773fe5e4fa206d9c11757f 483 SUPERFAMILY SSF56112 81 404 2.11E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily AM399 327ceab63f773fe5e4fa206d9c11757f 483 Pfam PF03109 ABC1 family 99 215 3.5E-28 T 11-10-2018 IPR004147 UbiB domain AM090 3c22283a58e92ed43025848e2728c76b 282 Gene3D G3DSA:2.40.160.20 77 259 1.6E-19 T 11-10-2018 AM090 3c22283a58e92ed43025848e2728c76b 282 Pfam PF01617 Surface antigen 43 281 8.4E-90 T 11-10-2018 IPR002566 Surface antigen msp4 AM090 3c22283a58e92ed43025848e2728c76b 282 SUPERFAMILY SSF56925 45 281 1.52E-22 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM110 5e0880d50b0a94fe025e081e6184e51d 339 SUPERFAMILY SSF52151 17 322 7.32E-69 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM110 5e0880d50b0a94fe025e081e6184e51d 339 SUPERFAMILY SSF55048 147 214 1.83E-14 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding AM110 5e0880d50b0a94fe025e081e6184e51d 339 PIRSF PIRSF000446 14 326 6.9E-76 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM110 5e0880d50b0a94fe025e081e6184e51d 339 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 17 307 1.5E-78 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AM110 5e0880d50b0a94fe025e081e6184e51d 339 Gene3D G3DSA:3.40.366.10 19 302 2.1E-88 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 AM110 5e0880d50b0a94fe025e081e6184e51d 339 Gene3D G3DSA:3.30.70.250 144 216 2.1E-88 T 11-10-2018 AM110 5e0880d50b0a94fe025e081e6184e51d 339 Pfam PF00698 Acyl transferase domain 18 303 5.4E-32 T 11-10-2018 IPR014043 Acyl transferase AM110 5e0880d50b0a94fe025e081e6184e51d 339 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 20 324 3.9E-33 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 Gene3D G3DSA:3.30.465.10 199 291 2.2E-15 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 SUPERFAMILY SSF54631 70 199 4.15E-27 T 11-10-2018 AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 Pfam PF03471 Transporter associated domain 208 286 3.3E-12 T 11-10-2018 IPR005170 Transporter-associated domain AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 Pfam PF00571 CBS domain 140 190 2.5E-4 T 11-10-2018 IPR000644 CBS domain AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 SMART SM01091 206 288 4.6E-15 T 11-10-2018 IPR005170 Transporter-associated domain AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 SUPERFAMILY SSF56176 203 284 1.04E-14 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM1303 2e4254f45ed3a40e88f7c888ce82f108 293 Gene3D G3DSA:3.10.580.10 51 198 6.7E-48 T 11-10-2018 AM376 14e307ba1278b61ab16b846b1b88b48e 638 Gene3D G3DSA:1.20.120.790 495 633 1.1E-31 T 11-10-2018 IPR037196 HSP90, C-terminal domain AM376 14e307ba1278b61ab16b846b1b88b48e 638 PIRSF PIRSF002583 1 638 9.5E-197 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AM376 14e307ba1278b61ab16b846b1b88b48e 638 SUPERFAMILY SSF54211 224 477 1.37E-81 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM376 14e307ba1278b61ab16b846b1b88b48e 638 SUPERFAMILY SSF55874 5 211 7.47E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 120 142 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 5 25 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 75 92 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 93 110 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 189 207 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 26 48 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 PRINTS PR00775 90kDa heat shock protein signature 171 188 2.2E-55 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal AM376 14e307ba1278b61ab16b846b1b88b48e 638 SUPERFAMILY SSF110942 517 633 5.36E-28 T 11-10-2018 IPR037196 HSP90, C-terminal domain AM376 14e307ba1278b61ab16b846b1b88b48e 638 Pfam PF00183 Hsp90 protein 216 633 2.0E-105 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AM376 14e307ba1278b61ab16b846b1b88b48e 638 Gene3D G3DSA:3.30.230.80 224 390 2.5E-56 T 11-10-2018 AM376 14e307ba1278b61ab16b846b1b88b48e 638 Gene3D G3DSA:3.30.565.10 2 223 2.4E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM376 14e307ba1278b61ab16b846b1b88b48e 638 SMART SM00387 27 183 0.0034 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM376 14e307ba1278b61ab16b846b1b88b48e 638 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 AM376 14e307ba1278b61ab16b846b1b88b48e 638 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 633 28.734 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 AM376 14e307ba1278b61ab16b846b1b88b48e 638 Gene3D G3DSA:3.40.50.11260 391 479 7.8E-25 T 11-10-2018 AM376 14e307ba1278b61ab16b846b1b88b48e 638 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 152 1.0E-10 T 11-10-2018 AM662 8288eeac484831959485c91eec55b9af 298 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 295 4.9E-23 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 SUPERFAMILY SSF53671 4 298 6.81E-80 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 144 5.5E-36 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 5 297 4.5E-79 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 Gene3D G3DSA:3.40.50.1370 9 293 1.5E-81 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 Gene3D G3DSA:3.40.50.1370 132 277 1.5E-81 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00101 Aspartate carbamoyltransferase signature 278 292 2.2E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 2.2E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 84 2.2E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00101 Aspartate carbamoyltransferase signature 214 223 2.2E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00101 Aspartate carbamoyltransferase signature 37 59 2.2E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00101 Aspartate carbamoyltransferase signature 255 260 2.2E-25 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 251 260 3.7E-16 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 3.7E-16 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 3.7E-16 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 286 3.7E-16 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM662 8288eeac484831959485c91eec55b9af 298 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 298 33.345 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 Gene3D G3DSA:3.30.70.890 167 288 1.3E-19 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 SUPERFAMILY SSF54211 8 160 8.35E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 265 6.7E-51 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 Gene3D G3DSA:3.30.230.10 2 162 2.8E-43 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 SUPERFAMILY SSF55060 167 285 9.21E-24 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 PIRSF PIRSF010376 6 289 1.8E-68 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 8 288 27.638 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 Pfam PF08544 GHMP kinases C terminal 219 273 4.7E-10 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain AM493 3b1a0cddeba458b5627cb5eec92bbcc1 289 Pfam PF00288 GHMP kinases N terminal domain 93 145 1.2E-5 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 Gene3D G3DSA:3.30.420.40 131 167 2.5E-59 T 11-10-2018 AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 SUPERFAMILY SSF53067 7 123 2.01E-29 T 11-10-2018 AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 Gene3D G3DSA:3.30.420.40 7 130 2.5E-59 T 11-10-2018 AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 Pfam PF00814 Glycoprotease family 27 167 1.6E-48 T 11-10-2018 IPR000905 Gcp-like domain AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 5.2E-35 T 11-10-2018 IPR017861 Kae1/TsaD family AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 5.2E-35 T 11-10-2018 IPR017861 Kae1/TsaD family AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 168 5.2E-35 T 11-10-2018 IPR017861 Kae1/TsaD family AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 5.2E-35 T 11-10-2018 IPR017861 Kae1/TsaD family AM572 5c875090ddf0e2aa03cfb42de700b7e4 168 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 5.2E-35 T 11-10-2018 IPR017861 Kae1/TsaD family AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 Gene3D G3DSA:3.40.50.620 1 310 6.5E-118 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 Gene3D G3DSA:1.20.120.640 312 465 3.6E-28 T 11-10-2018 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 SUPERFAMILY SSF47323 321 463 5.23E-24 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 SMART SM00840 348 407 7.8E-14 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 464 3.4E-142 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 318 3.6E-111 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 464 36.791 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 SUPERFAMILY SSF52374 2 317 3.22E-89 T 11-10-2018 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 4.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 4.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 4.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 4.5E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AM481 4c48dd3169c2e377469b6b97bbf8ebf0 466 Pfam PF09190 DALR domain 349 406 2.9E-13 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 Pfam PF01565 FAD binding domain 36 163 3.1E-18 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 294 2.2E-28 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 SUPERFAMILY SSF56176 23 205 6.18E-40 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 Gene3D G3DSA:3.90.78.10 213 298 2.4E-32 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 Gene3D G3DSA:3.30.465.10 87 212 5.7E-35 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 24 296 2.6E-57 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 Gene3D G3DSA:3.30.43.10 7 83 2.6E-15 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 299 85.096 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM701 dbcf2fc9b37c541116955e7f5bebc1dd 299 SUPERFAMILY SSF56194 192 297 3.14E-37 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM1317 f5a30326a80291f952d1cbcf08698db2 377 Pfam PF00925 GTP cyclohydrolase II 201 353 1.3E-44 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM1317 f5a30326a80291f952d1cbcf08698db2 377 SUPERFAMILY SSF142695 202 355 1.31E-43 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM1317 f5a30326a80291f952d1cbcf08698db2 377 Gene3D G3DSA:3.40.50.10990 187 357 3.7E-50 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 AM957 26752093488d5d0da538a68bcf516337 214 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 188 29.027 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM957 26752093488d5d0da538a68bcf516337 214 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 186 1.4E-62 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 AM957 26752093488d5d0da538a68bcf516337 214 SUPERFAMILY SSF53328 7 199 1.83E-56 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM957 26752093488d5d0da538a68bcf516337 214 Gene3D G3DSA:3.40.50.170 2 213 1.1E-76 T 11-10-2018 AM957 26752093488d5d0da538a68bcf516337 214 Pfam PF00551 Formyl transferase 8 182 6.5E-50 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM1010 43abc6525edb074faf51cf648968ec48 308 SUPERFAMILY SSF48452 52 252 7.01E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM1010 43abc6525edb074faf51cf648968ec48 308 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 26 248 1.1E-55 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AM1010 43abc6525edb074faf51cf648968ec48 308 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 21 252 24.717 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD AM1010 43abc6525edb074faf51cf648968ec48 308 Gene3D G3DSA:1.25.40.10 52 254 5.0E-44 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM1010 43abc6525edb074faf51cf648968ec48 308 Pfam PF13525 Outer membrane lipoprotein 53 242 7.0E-40 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like AM473 f1affe6d91f35d2d6e97e13e5375fc19 253 Pfam PF00459 Inositol monophosphatase family 49 206 1.7E-16 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM473 f1affe6d91f35d2d6e97e13e5375fc19 253 SUPERFAMILY SSF56655 7 247 2.23E-35 T 11-10-2018 AM473 f1affe6d91f35d2d6e97e13e5375fc19 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 3.5E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM473 f1affe6d91f35d2d6e97e13e5375fc19 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 3.5E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM473 f1affe6d91f35d2d6e97e13e5375fc19 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 3.5E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 AM473 f1affe6d91f35d2d6e97e13e5375fc19 253 Gene3D G3DSA:3.30.540.10 3 142 2.0E-24 T 11-10-2018 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 144 8.7E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 5 393 1.3E-200 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 SUPERFAMILY SSF50465 302 393 7.44E-34 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Gene3D G3DSA:3.40.50.300 1 202 3.8E-63 T 11-10-2018 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 177 5.3E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 SUPERFAMILY SSF50447 204 298 9.03E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 SUPERFAMILY SSF52540 5 225 2.68E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Gene3D G3DSA:2.40.30.10 206 299 1.6E-37 T 11-10-2018 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.518 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 1.4E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Gene3D G3DSA:2.40.30.10 300 392 4.6E-39 T 11-10-2018 AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 4.1E-30 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM254 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 144 8.7E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 5 393 1.3E-200 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 3.6E-22 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 SUPERFAMILY SSF50465 302 393 7.44E-34 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Gene3D G3DSA:3.40.50.300 1 202 3.8E-63 T 11-10-2018 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 177 5.3E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 SUPERFAMILY SSF50447 204 298 9.03E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 SUPERFAMILY SSF52540 5 225 2.68E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Gene3D G3DSA:2.40.30.10 206 299 1.6E-37 T 11-10-2018 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.518 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 1.4E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Gene3D G3DSA:2.40.30.10 300 392 4.6E-39 T 11-10-2018 AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 4.1E-30 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AM914 f53f2c33e68cd0ed4705fb3d33b1a0e4 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AM060 1351d1729c23960721865c16338ec4e2 428 SUPERFAMILY SSF103473 9 420 5.75E-48 T 11-10-2018 IPR036259 MFS transporter superfamily AM060 1351d1729c23960721865c16338ec4e2 428 Pfam PF00083 Sugar (and other) transporter 13 212 1.3E-17 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM060 1351d1729c23960721865c16338ec4e2 428 Pfam PF00083 Sugar (and other) transporter 224 414 5.0E-7 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM060 1351d1729c23960721865c16338ec4e2 428 Gene3D G3DSA:1.20.1250.20 7 422 3.0E-50 T 11-10-2018 AM931 44a4ba6ceaddb79818d14b9ea1908b07 268 Pfam PF00809 Pterin binding enzyme 10 252 1.4E-69 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM931 44a4ba6ceaddb79818d14b9ea1908b07 268 Gene3D G3DSA:3.20.20.20 1 268 1.2E-86 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM931 44a4ba6ceaddb79818d14b9ea1908b07 268 SUPERFAMILY SSF51717 4 267 1.96E-77 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM931 44a4ba6ceaddb79818d14b9ea1908b07 268 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 8 23 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM931 44a4ba6ceaddb79818d14b9ea1908b07 268 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 264 8.4E-81 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 AM931 44a4ba6ceaddb79818d14b9ea1908b07 268 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 42 55 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM524 6cd0ccc64488cc21979fa5fbf312f5dc 306 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 177 2.0E-47 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AM524 6cd0ccc64488cc21979fa5fbf312f5dc 306 Gene3D G3DSA:3.30.2350.10 2 240 1.1E-77 T 11-10-2018 AM524 6cd0ccc64488cc21979fa5fbf312f5dc 306 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 9 216 2.7E-64 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM524 6cd0ccc64488cc21979fa5fbf312f5dc 306 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 7 304 17.399 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM524 6cd0ccc64488cc21979fa5fbf312f5dc 306 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 233 9.3E-13 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 AM524 6cd0ccc64488cc21979fa5fbf312f5dc 306 SUPERFAMILY SSF55120 6 236 1.27E-70 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM861 b78f326cd04cb725b368f9e34dd9e2c8 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 92 108 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM861 b78f326cd04cb725b368f9e34dd9e2c8 291 Pfam PF00348 Polyprenyl synthetase 42 239 5.6E-47 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM861 b78f326cd04cb725b368f9e34dd9e2c8 291 Gene3D G3DSA:1.10.600.10 3 289 7.2E-75 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM861 b78f326cd04cb725b368f9e34dd9e2c8 291 SUPERFAMILY SSF48576 15 273 2.06E-64 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM956 62a7530afb5383372e043aa013c6ce87 534 PRINTS PR00481 Cytosol aminopeptidase signature 351 372 1.9E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 PRINTS PR00481 Cytosol aminopeptidase signature 314 335 1.9E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 PRINTS PR00481 Cytosol aminopeptidase signature 402 417 1.9E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 PRINTS PR00481 Cytosol aminopeptidase signature 292 309 1.9E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 PRINTS PR00481 Cytosol aminopeptidase signature 373 393 1.9E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 216 524 5.0E-120 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 SUPERFAMILY SSF53187 212 531 2.32E-116 T 11-10-2018 AM956 62a7530afb5383372e043aa013c6ce87 534 Gene3D G3DSA:3.40.220.10 45 207 5.9E-20 T 11-10-2018 AM956 62a7530afb5383372e043aa013c6ce87 534 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 377 384 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 43 533 33.201 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 SUPERFAMILY SSF52949 56 200 1.71E-20 T 11-10-2018 AM956 62a7530afb5383372e043aa013c6ce87 534 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 59 173 7.9E-9 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 AM956 62a7530afb5383372e043aa013c6ce87 534 Gene3D G3DSA:3.40.630.10 208 531 3.3E-125 T 11-10-2018 AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Pfam PF16188 C-terminal region of peptidase_M24 511 570 3.3E-19 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Pfam PF00557 Metallopeptidase family M24 293 505 2.9E-46 T 11-10-2018 IPR000994 Peptidase M24 AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Pfam PF16189 Creatinase/Prolidase N-terminal domain 140 289 5.9E-24 T 11-10-2018 AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 126 3.7E-12 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 SUPERFAMILY SSF53092 3 127 9.59E-10 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Gene3D G3DSA:3.40.350.10 2 138 7.1E-24 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 SUPERFAMILY SSF55920 286 536 2.09E-59 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Gene3D G3DSA:3.40.350.10 139 274 4.4E-12 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AM832 bf4b20bd7e9c3ef54dad448e1bf7df96 570 Gene3D G3DSA:3.90.230.10 283 570 2.1E-96 T 11-10-2018 AM021 77f044a40dd7dfd34380b7ffb691ce89 312 Gene3D G3DSA:1.10.150.130 3 98 4.5E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AM021 77f044a40dd7dfd34380b7ffb691ce89 312 Gene3D G3DSA:1.10.443.10 103 308 5.9E-47 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM021 77f044a40dd7dfd34380b7ffb691ce89 312 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 86 1.4E-16 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM021 77f044a40dd7dfd34380b7ffb691ce89 312 SUPERFAMILY SSF56349 4 300 2.41E-52 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM021 77f044a40dd7dfd34380b7ffb691ce89 312 Pfam PF00589 Phage integrase family 110 292 1.8E-34 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM885 66978e38ef95afcb0710069aee2bb502 787 SUPERFAMILY SSF56037 209 393 3.66E-60 T 11-10-2018 AM885 66978e38ef95afcb0710069aee2bb502 787 Pfam PF03483 B3/4 domain 212 382 3.7E-55 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 Pfam PF03147 Ferredoxin-fold anticodon binding domain 695 785 1.4E-16 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 785 6.7E-195 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 SUPERFAMILY SSF55681 465 680 1.99E-38 T 11-10-2018 AM885 66978e38ef95afcb0710069aee2bb502 787 Gene3D G3DSA:3.30.56.10 5 180 6.8E-49 T 11-10-2018 AM885 66978e38ef95afcb0710069aee2bb502 787 SMART SM00874 399 469 1.9E-20 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM885 66978e38ef95afcb0710069aee2bb502 787 Gene3D G3DSA:3.30.930.10 486 680 2.4E-45 T 11-10-2018 AM885 66978e38ef95afcb0710069aee2bb502 787 Pfam PF03484 tRNA synthetase B5 domain 411 469 8.7E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM885 66978e38ef95afcb0710069aee2bb502 787 SUPERFAMILY SSF54991 694 785 1.09E-19 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 Gene3D G3DSA:3.50.40.10 201 391 2.9E-55 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 Gene3D G3DSA:2.40.50.140 38 153 6.8E-49 T 11-10-2018 AM885 66978e38ef95afcb0710069aee2bb502 787 SMART SM00873 208 382 1.5E-64 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 Pfam PF01588 Putative tRNA binding domain 44 147 2.4E-21 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 AM885 66978e38ef95afcb0710069aee2bb502 787 SMART SM00896 695 785 1.6E-25 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 779 35.484 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM885 66978e38ef95afcb0710069aee2bb502 787 SUPERFAMILY SSF46955 400 473 2.29E-13 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AM885 66978e38ef95afcb0710069aee2bb502 787 SUPERFAMILY SSF50249 42 193 6.86E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM885 66978e38ef95afcb0710069aee2bb502 787 Gene3D G3DSA:3.30.56.10 398 472 2.8E-17 T 11-10-2018 AM885 66978e38ef95afcb0710069aee2bb502 787 Gene3D G3DSA:3.30.70.380 695 786 2.7E-17 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 AM268 13e0526942e713c5dc3e9dfa2793308d 380 Gene3D G3DSA:3.90.1150.10 45 362 9.1E-105 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM268 13e0526942e713c5dc3e9dfa2793308d 380 Gene3D G3DSA:3.40.640.10 61 280 9.1E-105 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM268 13e0526942e713c5dc3e9dfa2793308d 380 Pfam PF00155 Aminotransferase class I and II 45 364 1.1E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM268 13e0526942e713c5dc3e9dfa2793308d 380 SUPERFAMILY SSF53383 27 366 3.76E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM668 5d0c13838a53a292249765b2a1a394eb 483 Gene3D G3DSA:1.10.357.20 307 483 5.9E-46 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain AM668 5d0c13838a53a292249765b2a1a394eb 483 Pfam PF01769 Divalent cation transporter 354 475 3.7E-21 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AM668 5d0c13838a53a292249765b2a1a394eb 483 Gene3D G3DSA:3.10.580.10 167 294 3.0E-30 T 11-10-2018 AM668 5d0c13838a53a292249765b2a1a394eb 483 SMART SM00116 178 231 13.0 T 11-10-2018 IPR000644 CBS domain AM668 5d0c13838a53a292249765b2a1a394eb 483 SMART SM00116 242 290 5.4E-7 T 11-10-2018 IPR000644 CBS domain AM668 5d0c13838a53a292249765b2a1a394eb 483 Pfam PF03448 MgtE intracellular N domain 71 169 4.5E-17 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM668 5d0c13838a53a292249765b2a1a394eb 483 SUPERFAMILY SSF54631 171 303 1.89E-23 T 11-10-2018 AM668 5d0c13838a53a292249765b2a1a394eb 483 Gene3D G3DSA:1.25.60.10 39 166 3.3E-12 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily AM668 5d0c13838a53a292249765b2a1a394eb 483 SMART SM00924 68 171 3.6E-24 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain AM668 5d0c13838a53a292249765b2a1a394eb 483 Pfam PF00571 CBS domain 173 229 0.0064 T 11-10-2018 IPR000644 CBS domain AM668 5d0c13838a53a292249765b2a1a394eb 483 Pfam PF00571 CBS domain 235 289 1.5E-7 T 11-10-2018 IPR000644 CBS domain AM668 5d0c13838a53a292249765b2a1a394eb 483 SUPERFAMILY SSF158791 43 168 4.05E-20 T 11-10-2018 AM668 5d0c13838a53a292249765b2a1a394eb 483 TIGRFAM TIGR00400 mgtE: magnesium transporter 53 482 1.1E-80 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AM668 5d0c13838a53a292249765b2a1a394eb 483 SUPERFAMILY SSF161093 311 482 3.27E-42 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 AM259 af91eaa428bcb8b445f2a0891b970887 217 Pfam PF00687 Ribosomal protein L1p/L10e family 18 208 1.3E-44 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AM259 af91eaa428bcb8b445f2a0891b970887 217 PIRSF PIRSF002155 2 215 1.0E-68 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM259 af91eaa428bcb8b445f2a0891b970887 217 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 8 213 3.3E-77 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM259 af91eaa428bcb8b445f2a0891b970887 217 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 5 216 33.034 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AM259 af91eaa428bcb8b445f2a0891b970887 217 Gene3D G3DSA:3.40.50.790 56 148 4.3E-74 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AM259 af91eaa428bcb8b445f2a0891b970887 217 Gene3D G3DSA:3.30.190.20 9 213 4.3E-74 T 11-10-2018 AM259 af91eaa428bcb8b445f2a0891b970887 217 ProSitePatterns PS01199 Ribosomal protein L1 signature. 110 128 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM259 af91eaa428bcb8b445f2a0891b970887 217 SUPERFAMILY SSF56808 6 213 4.19E-70 T 11-10-2018 IPR023674 Ribosomal protein L1-like AM152 dfd1af833f17af4847448c018268beab 673 SUPERFAMILY SSF52113 593 669 8.5E-17 T 11-10-2018 IPR036420 BRCT domain superfamily AM152 dfd1af833f17af4847448c018268beab 673 Hamap MF_01588 DNA ligase [ligA]. 3 668 44.618 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:2.40.50.140 311 382 5.9E-31 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 SUPERFAMILY SSF56091 3 308 3.42E-98 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 Pfam PF12826 Helix-hairpin-helix motif 507 573 9.4E-8 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 664 5.2E-205 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM152 dfd1af833f17af4847448c018268beab 673 SUPERFAMILY SSF47781 395 578 4.78E-43 T 11-10-2018 IPR010994 RuvA domain 2-like AM152 dfd1af833f17af4847448c018268beab 673 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 314 389 3.3E-33 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AM152 dfd1af833f17af4847448c018268beab 673 SMART SM00292 594 671 2.3E-10 T 11-10-2018 IPR001357 BRCT domain AM152 dfd1af833f17af4847448c018268beab 673 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 119 148 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site AM152 dfd1af833f17af4847448c018268beab 673 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 309 7.0E-95 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:2.20.70.80 385 422 1.2E-10 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 PIRSF PIRSF001604 1 673 1.3E-220 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AM152 dfd1af833f17af4847448c018268beab 673 SUPERFAMILY SSF50249 311 391 2.57E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:3.30.470.90 73 310 2.9E-80 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:3.40.50.10190 581 671 1.3E-24 T 11-10-2018 IPR036420 BRCT domain superfamily AM152 dfd1af833f17af4847448c018268beab 673 SMART SM00532 4 440 7.4E-193 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AM152 dfd1af833f17af4847448c018268beab 673 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 399 426 2.5E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:1.10.287.610 2 72 1.0E-13 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:1.10.150.20 424 500 6.6E-21 T 11-10-2018 AM152 dfd1af833f17af4847448c018268beab 673 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 665 5.0E-10 T 11-10-2018 IPR001357 BRCT domain AM152 dfd1af833f17af4847448c018268beab 673 Gene3D G3DSA:1.10.150.20 502 580 8.1E-11 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF04563 RNA polymerase beta subunit 38 522 1.9E-22 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:3.90.1100.10 467 644 1.4E-67 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 23 1373 11.734 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1095 1107 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 SUPERFAMILY SSF64484 30 1374 0.0 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF04565 RNA polymerase Rpb2, domain 3 539 607 9.3E-32 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:3.90.1110.10 343 466 1.4E-29 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF04561 RNA polymerase Rpb2, domain 2 382 480 5.0E-22 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF04561 RNA polymerase Rpb2, domain 2 176 248 1.2E-8 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:2.40.50.100 740 817 1.5E-28 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:2.40.50.150 857 983 6.4E-33 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 34 1368 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:3.90.1110.10 183 261 2.2E-26 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:2.40.270.10 818 856 1.4E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:2.40.270.10 1067 1273 1.2E-79 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:3.90.1100.10 33 182 2.3E-51 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:3.90.1100.10 668 739 1.3E-19 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF00562 RNA polymerase Rpb2, domain 6 743 1294 1.1E-147 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Gene3D G3DSA:3.90.1800.10 1283 1346 8.2E-11 T 11-10-2018 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF04560 RNA polymerase Rpb2, domain 7 1297 1371 7.1E-25 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM262 f98456e334231e15799e2f65da18b0f7 1382 Pfam PF10385 RNA polymerase beta subunit external 1 domain 617 682 1.0E-20 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM1267 202b9414843526afc5934f52b775cf35 275 Gene3D G3DSA:3.90.1530.30 43 107 4.8E-26 T 11-10-2018 AM1267 202b9414843526afc5934f52b775cf35 275 SMART SM00470 30 121 4.3E-32 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AM1267 202b9414843526afc5934f52b775cf35 275 SUPERFAMILY SSF110849 31 123 5.23E-26 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily AM1267 202b9414843526afc5934f52b775cf35 275 SUPERFAMILY SSF109709 113 221 2.88E-32 T 11-10-2018 AM1267 202b9414843526afc5934f52b775cf35 275 Pfam PF02195 ParB-like nuclease domain 31 121 5.1E-25 T 11-10-2018 IPR003115 ParB/Sulfiredoxin AM1267 202b9414843526afc5934f52b775cf35 275 Gene3D G3DSA:1.10.10.2830 108 219 5.0E-34 T 11-10-2018 AM1267 202b9414843526afc5934f52b775cf35 275 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 30 201 1.9E-56 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AM601 043c5f9116c70ef020f1d7334380b50e 348 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 316 6.2E-128 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 Pfam PF01926 50S ribosome-binding GTPase 161 280 1.2E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 Hamap MF_01454 GTPase Obg [obg]. 2 325 43.479 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 7.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 7.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.0E-33 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 AM601 043c5f9116c70ef020f1d7334380b50e 348 SUPERFAMILY SSF52540 161 308 2.57E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM601 043c5f9116c70ef020f1d7334380b50e 348 Gene3D G3DSA:2.70.210.12 1 158 7.8E-56 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AM601 043c5f9116c70ef020f1d7334380b50e 348 Pfam PF01018 GTP1/OBG 4 157 9.6E-56 T 11-10-2018 IPR006169 GTP1/OBG domain AM601 043c5f9116c70ef020f1d7334380b50e 348 PIRSF PIRSF002401 1 337 1.8E-123 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type AM601 043c5f9116c70ef020f1d7334380b50e 348 SUPERFAMILY SSF82051 3 158 1.14E-52 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily AM601 043c5f9116c70ef020f1d7334380b50e 348 Gene3D G3DSA:3.40.50.300 160 336 1.2E-44 T 11-10-2018 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 PIRSF PIRSF006205 6 392 2.4E-123 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 Gene3D G3DSA:3.40.50.720 4 153 8.3E-41 T 11-10-2018 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 SUPERFAMILY SSF55347 129 265 5.56E-53 T 11-10-2018 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 SUPERFAMILY SSF51735 7 153 1.19E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 135 2.5E-29 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 SUPERFAMILY SSF69055 293 387 2.22E-24 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 383 1.5E-108 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 Gene3D G3DSA:1.10.1740.10 303 391 3.1E-19 T 11-10-2018 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 385 38.683 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 262 379 5.8E-29 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM743 5154a9d8cbdcbb0506266b36662f3ba0 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 149 230 1.5E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Gene3D G3DSA:3.30.1480.10 8 145 4.8E-16 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SMART SM00316 153 220 1.6E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SUPERFAMILY SSF69705 9 145 1.22E-23 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SMART SM00322 250 323 0.32 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SMART SM00322 324 431 0.29 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Gene3D G3DSA:1.10.150.20 374 439 6.1E-18 T 11-10-2018 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SUPERFAMILY SSF47794 376 435 1.11E-11 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Gene3D G3DSA:3.30.300.20 219 297 3.0E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Pfam PF08529 NusA N-terminal domain 11 144 1.2E-18 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Gene3D G3DSA:3.30.300.20 298 367 9.8E-23 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Gene3D G3DSA:2.40.50.140 155 218 2.0E-17 T 11-10-2018 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 385 434 1.6E-16 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Pfam PF13184 NusA-like KH domain 250 318 5.5E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SUPERFAMILY SSF50249 151 219 2.86E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 449 26.319 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 12 359 5.9E-105 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SUPERFAMILY SSF54814 299 361 1.44E-14 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 Pfam PF14520 Helix-hairpin-helix domain 452 510 7.1E-9 T 11-10-2018 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SUPERFAMILY SSF47794 449 512 1.07E-6 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 AM736 25e2401fae752ab9d4fde4bd0177e2bf 515 SUPERFAMILY SSF54814 222 297 2.55E-28 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM172 a550068b2ebcf506291d93f570ab6e0e 331 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 325 5.7E-125 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM172 a550068b2ebcf506291d93f570ab6e0e 331 Gene3D G3DSA:1.10.8.60 183 257 9.4E-23 T 11-10-2018 AM172 a550068b2ebcf506291d93f570ab6e0e 331 SMART SM00382 52 183 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain AM172 a550068b2ebcf506291d93f570ab6e0e 331 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 325 4.0E-36 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM172 a550068b2ebcf506291d93f570ab6e0e 331 SUPERFAMILY SSF52540 21 237 6.26E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM172 a550068b2ebcf506291d93f570ab6e0e 331 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 331 141.723 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM172 a550068b2ebcf506291d93f570ab6e0e 331 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 325 2.1E-25 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AM172 a550068b2ebcf506291d93f570ab6e0e 331 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 11 235 6.1E-106 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AM172 a550068b2ebcf506291d93f570ab6e0e 331 SUPERFAMILY SSF46785 259 325 1.52E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM172 a550068b2ebcf506291d93f570ab6e0e 331 Gene3D G3DSA:1.10.10.10 259 330 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM172 a550068b2ebcf506291d93f570ab6e0e 331 Gene3D G3DSA:3.40.50.300 21 182 4.6E-39 T 11-10-2018 AM177 d3a45ea7e8d285366a18f2f368fb4178 244 Gene3D G3DSA:3.30.63.10 75 134 5.4E-57 T 11-10-2018 AM177 d3a45ea7e8d285366a18f2f368fb4178 244 SMART SM00072 42 225 5.0E-33 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM177 d3a45ea7e8d285366a18f2f368fb4178 244 Pfam PF00625 Guanylate kinase 46 221 2.4E-35 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AM177 d3a45ea7e8d285366a18f2f368fb4178 244 Gene3D G3DSA:3.40.50.300 43 227 5.4E-57 T 11-10-2018 AM177 d3a45ea7e8d285366a18f2f368fb4178 244 ProSitePatterns PS00856 Guanylate kinase-like signature. 78 95 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AM177 d3a45ea7e8d285366a18f2f368fb4178 244 SUPERFAMILY SSF52540 42 227 3.88E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM177 d3a45ea7e8d285366a18f2f368fb4178 244 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 44 221 5.9E-57 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 AM445 c8f8f909c5a2c872ce9b953c880badc8 107 SUPERFAMILY SSF47413 11 79 2.11E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM445 c8f8f909c5a2c872ce9b953c880badc8 107 Pfam PF13744 Helix-turn-helix domain 11 77 5.7E-14 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain AM445 c8f8f909c5a2c872ce9b953c880badc8 107 Gene3D G3DSA:1.10.260.40 7 68 6.2E-17 T 11-10-2018 AM564 03f9e4b13916c73916eaedda743a35a9 317 Gene3D G3DSA:3.90.110.10 151 316 1.6E-60 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 SUPERFAMILY SSF51735 8 148 1.3E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM564 03f9e4b13916c73916eaedda743a35a9 317 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 317 44.283 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AM564 03f9e4b13916c73916eaedda743a35a9 317 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 7 313 3.3E-114 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 AM564 03f9e4b13916c73916eaedda743a35a9 317 SUPERFAMILY SSF56327 150 314 8.94E-53 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 1.5E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.5E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 1.5E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.5E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 1.5E-26 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 310 8.0E-29 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 Gene3D G3DSA:3.40.50.720 2 149 4.2E-51 T 11-10-2018 AM564 03f9e4b13916c73916eaedda743a35a9 317 PIRSF PIRSF000102 3 316 1.4E-102 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 AM564 03f9e4b13916c73916eaedda743a35a9 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 147 4.5E-40 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 AM755 03b11d69f88347e7cb96214b2e435789 305 Gene3D G3DSA:1.10.20.140 110 180 1.7E-67 T 11-10-2018 AM755 03b11d69f88347e7cb96214b2e435789 305 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 279 1.1E-54 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM755 03b11d69f88347e7cb96214b2e435789 305 SUPERFAMILY SSF52540 4 221 5.86E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM755 03b11d69f88347e7cb96214b2e435789 305 Pfam PF01715 IPP transferase 37 278 7.0E-49 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM755 03b11d69f88347e7cb96214b2e435789 305 Gene3D G3DSA:3.40.50.300 8 278 1.7E-67 T 11-10-2018 AM755 03b11d69f88347e7cb96214b2e435789 305 SUPERFAMILY SSF52540 5 149 7.3E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM755 03b11d69f88347e7cb96214b2e435789 305 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 294 22.2 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 AM652 54e54772c13338ae7c0dac0cd14f3128 182 SMART SM00271 36 99 6.5E-7 T 11-10-2018 IPR001623 DnaJ domain AM652 54e54772c13338ae7c0dac0cd14f3128 182 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 48 176 3.0E-18 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM652 54e54772c13338ae7c0dac0cd14f3128 182 Pfam PF00226 DnaJ domain 37 103 2.9E-7 T 11-10-2018 IPR001623 DnaJ domain AM652 54e54772c13338ae7c0dac0cd14f3128 182 SUPERFAMILY SSF46565 37 107 1.96E-14 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AM652 54e54772c13338ae7c0dac0cd14f3128 182 Gene3D G3DSA:1.10.287.110 36 112 1.6E-18 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 181 322 1.1E-43 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 Gene3D G3DSA:3.40.50.720 1 177 3.9E-55 T 11-10-2018 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 PIRSF PIRSF000116 2 204 4.0E-32 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 PIRSF PIRSF000116 199 323 6.7E-14 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 12 170 7.1E-52 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 Gene3D G3DSA:1.10.3730.40 180 323 8.1E-51 T 11-10-2018 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 SUPERFAMILY SSF51735 6 170 2.01E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 SUPERFAMILY SSF48179 181 322 4.42E-48 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM1310 7a77a8490f19b9ffc80e9b946e50e708 323 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 12 322 6.0E-90 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF54211 2 143 8.6E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM526 598e201eb0107bdc97f555b7542bdde1 805 Pfam PF00575 S1 RNA binding domain 623 693 1.4E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 AM526 598e201eb0107bdc97f555b7542bdde1 805 Gene3D G3DSA:3.30.230.70 233 554 2.6E-107 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM526 598e201eb0107bdc97f555b7542bdde1 805 PIRSF PIRSF005499 1 725 2.2E-269 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM526 598e201eb0107bdc97f555b7542bdde1 805 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 2.8E-11 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF54211 306 473 4.71E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF55666 455 553 1.31E-25 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM526 598e201eb0107bdc97f555b7542bdde1 805 Gene3D G3DSA:3.30.1370.10 555 626 2.6E-19 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF50249 625 702 2.5E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM526 598e201eb0107bdc97f555b7542bdde1 805 Gene3D G3DSA:2.40.50.140 627 698 6.9E-23 T 11-10-2018 AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF46915 240 331 4.58E-12 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM526 598e201eb0107bdc97f555b7542bdde1 805 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 324 1.6E-8 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM526 598e201eb0107bdc97f555b7542bdde1 805 Pfam PF00013 KH domain 562 618 1.7E-12 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF54791 560 644 2.77E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 AM526 598e201eb0107bdc97f555b7542bdde1 805 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 697 28.663 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM526 598e201eb0107bdc97f555b7542bdde1 805 Gene3D G3DSA:3.30.230.70 1 230 3.7E-72 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM526 598e201eb0107bdc97f555b7542bdde1 805 SMART SM00322 557 622 1.3E-13 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AM526 598e201eb0107bdc97f555b7542bdde1 805 SMART SM00316 625 694 4.0E-17 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM526 598e201eb0107bdc97f555b7542bdde1 805 Pfam PF01138 3' exoribonuclease family, domain 1 328 461 1.8E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM526 598e201eb0107bdc97f555b7542bdde1 805 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 7.5E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM526 598e201eb0107bdc97f555b7542bdde1 805 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 695 2.5E-292 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AM526 598e201eb0107bdc97f555b7542bdde1 805 SUPERFAMILY SSF55666 137 229 9.82E-23 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 AM618 e56fd352374a079ab93f42d0ae49c6fd 444 Gene3D G3DSA:3.30.2290.10 2 221 3.6E-51 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal AM618 e56fd352374a079ab93f42d0ae49c6fd 444 Pfam PF01523 Putative modulator of DNA gyrase 21 312 1.7E-49 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 AM618 e56fd352374a079ab93f42d0ae49c6fd 444 SUPERFAMILY SSF111283 1 441 3.27E-109 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 AM013 193d3ac3bec789c58340be3e8cc45506 164 Pfam PF01025 GrpE 8 158 2.6E-43 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 Gene3D G3DSA:3.90.20.20 3 100 7.1E-15 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 SUPERFAMILY SSF51064 104 159 1.57E-16 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 SUPERFAMILY SSF58014 15 102 1.28E-19 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 Hamap MF_01151 Protein GrpE [grpE]. 11 158 16.426 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 PRINTS PR00773 GrpE protein signature 31 47 4.2E-18 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 PRINTS PR00773 GrpE protein signature 59 74 4.2E-18 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 PRINTS PR00773 GrpE protein signature 110 125 4.2E-18 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 PRINTS PR00773 GrpE protein signature 137 156 4.2E-18 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 AM013 193d3ac3bec789c58340be3e8cc45506 164 Gene3D G3DSA:2.30.22.10 102 158 2.7E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 AM641 b32711a7a7b70087d93164db4828c4ec 691 SUPERFAMILY SSF53706 213 626 2.24E-93 T 11-10-2018 AM641 b32711a7a7b70087d93164db4828c4ec 691 Gene3D G3DSA:3.40.50.740 386 637 4.7E-24 T 11-10-2018 AM641 b32711a7a7b70087d93164db4828c4ec 691 SMART SM00929 83 123 4.8E-19 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 Gene3D G3DSA:3.10.20.740 1 121 2.7E-42 T 11-10-2018 AM641 b32711a7a7b70087d93164db4828c4ec 691 Pfam PF00384 Molybdopterin oxidoreductase 271 604 2.1E-58 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 117 1.6E-15 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 SUPERFAMILY SSF54862 76 211 4.6E-36 T 11-10-2018 AM641 b32711a7a7b70087d93164db4828c4ec 691 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 635 682 1.6E-13 T 11-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM641 b32711a7a7b70087d93164db4828c4ec 691 Gene3D G3DSA:3.30.70.20 126 204 3.3E-5 T 11-10-2018 AM641 b32711a7a7b70087d93164db4828c4ec 691 SUPERFAMILY SSF54292 2 73 1.11E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM641 b32711a7a7b70087d93164db4828c4ec 691 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 75 2.4E-17 T 11-10-2018 AM641 b32711a7a7b70087d93164db4828c4ec 691 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 601 3.7E-218 T 11-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM471 806524ae4e9ca299f22287661aea4239 372 Gene3D G3DSA:3.40.50.2000 21 360 3.1E-79 T 11-10-2018 AM471 806524ae4e9ca299f22287661aea4239 372 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 196 360 2.0E-34 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 AM471 806524ae4e9ca299f22287661aea4239 372 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 20 370 25.874 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM471 806524ae4e9ca299f22287661aea4239 372 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 20 155 1.4E-20 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM471 806524ae4e9ca299f22287661aea4239 372 SUPERFAMILY SSF53756 18 368 2.96E-81 T 11-10-2018 AM471 806524ae4e9ca299f22287661aea4239 372 Gene3D G3DSA:3.40.50.2000 179 354 3.1E-79 T 11-10-2018 AM002 8d9920ffac0d5190d709a9d1a8f6e461 200 SUPERFAMILY SSF52833 25 151 2.62E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM002 8d9920ffac0d5190d709a9d1a8f6e461 200 Gene3D G3DSA:3.40.30.10 64 185 2.6E-7 T 11-10-2018 AM320 4e6643965eef158d3c3369ccd52a6916 437 Pfam PF01595 Domain of unknown function DUF21 22 196 6.6E-40 T 11-10-2018 IPR002550 CNNM, transmembrane domain AM320 4e6643965eef158d3c3369ccd52a6916 437 SMART SM01091 354 431 1.3E-21 T 11-10-2018 IPR005170 Transporter-associated domain AM320 4e6643965eef158d3c3369ccd52a6916 437 Gene3D G3DSA:3.30.465.10 353 428 1.7E-21 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 AM320 4e6643965eef158d3c3369ccd52a6916 437 SUPERFAMILY SSF54631 211 350 2.68E-28 T 11-10-2018 AM320 4e6643965eef158d3c3369ccd52a6916 437 Gene3D G3DSA:3.10.580.10 197 352 2.5E-45 T 11-10-2018 AM320 4e6643965eef158d3c3369ccd52a6916 437 SUPERFAMILY SSF56176 352 433 6.82E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 AM320 4e6643965eef158d3c3369ccd52a6916 437 Pfam PF00571 CBS domain 216 271 0.0017 T 11-10-2018 IPR000644 CBS domain AM320 4e6643965eef158d3c3369ccd52a6916 437 Pfam PF00571 CBS domain 290 338 2.5E-5 T 11-10-2018 IPR000644 CBS domain AM320 4e6643965eef158d3c3369ccd52a6916 437 Pfam PF03471 Transporter associated domain 356 429 1.0E-17 T 11-10-2018 IPR005170 Transporter-associated domain AM1222 c6d329eebdf8089559c150e5db460c89 403 SUPERFAMILY SSF56925 285 359 3.4E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1222 c6d329eebdf8089559c150e5db460c89 403 Gene3D G3DSA:2.40.160.20 227 389 1.1E-7 T 11-10-2018 AM1222 c6d329eebdf8089559c150e5db460c89 403 Pfam PF01617 Surface antigen 31 401 9.8E-30 T 11-10-2018 IPR002566 Surface antigen msp4 AM1237 ed5ae08880719a5e7edb22f6a414be59 290 Pfam PF03167 Uracil DNA glycosylase superfamily 124 275 3.7E-39 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM1237 ed5ae08880719a5e7edb22f6a414be59 290 SMART SM00986 123 275 9.4E-37 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM1237 ed5ae08880719a5e7edb22f6a414be59 290 SMART SM00987 123 275 9.4E-37 T 11-10-2018 AM1237 ed5ae08880719a5e7edb22f6a414be59 290 SUPERFAMILY SSF52141 93 282 1.6E-59 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM1237 ed5ae08880719a5e7edb22f6a414be59 290 Gene3D G3DSA:3.40.470.10 98 289 2.7E-60 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 AM1237 ed5ae08880719a5e7edb22f6a414be59 290 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 110 280 1.0E-62 T 11-10-2018 IPR005273 Uracil-DNA glycosylase family 4 AM656 704795493de7c07079d40a401877efe4 520 SUPERFAMILY SSF46785 3 139 2.03E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM656 704795493de7c07079d40a401877efe4 520 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 137 2.3E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AM656 704795493de7c07079d40a401877efe4 520 Pfam PF02082 Transcriptional regulator 1 81 1.4E-16 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type AM656 704795493de7c07079d40a401877efe4 520 SUPERFAMILY SSF53383 150 509 5.19E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM656 704795493de7c07079d40a401877efe4 520 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 53 71 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site AM656 704795493de7c07079d40a401877efe4 520 Gene3D G3DSA:3.90.1150.10 151 504 3.0E-101 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM656 704795493de7c07079d40a401877efe4 520 Gene3D G3DSA:1.10.260.50 162 417 3.0E-101 T 11-10-2018 AM656 704795493de7c07079d40a401877efe4 520 Pfam PF00266 Aminotransferase class-V 151 501 4.9E-48 T 11-10-2018 IPR000192 Aminotransferase class V domain AM656 704795493de7c07079d40a401877efe4 520 Gene3D G3DSA:3.40.640.10 209 374 3.0E-101 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM656 704795493de7c07079d40a401877efe4 520 Gene3D G3DSA:1.10.10.10 1 148 3.3E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM404 acdc2ba4a68ffb6dd00f1eeeb896f33a 276 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 34 268 8.3E-56 T 11-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 AM404 acdc2ba4a68ffb6dd00f1eeeb896f33a 276 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 161 1.1E-36 T 11-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal AM404 acdc2ba4a68ffb6dd00f1eeeb896f33a 276 Pfam PF09356 Phage conserved hypothetical protein BR0599 191 266 8.8E-26 T 11-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SMART SM01058 490 585 7.5E-33 T 11-10-2018 IPR003711 CarD-like/TRCF domain AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Gene3D G3DSA:2.30.30.840 494 550 1.2E-198 T 11-10-2018 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Gene3D G3DSA:3.30.2060.10 149 236 2.4E-61 T 11-10-2018 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SUPERFAMILY SSF52540 37 356 8.35E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SUPERFAMILY SSF141259 483 552 3.01E-16 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Pfam PF00271 Helicase conserved C-terminal domain 813 918 8.8E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 166 1087 4.1E-276 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SUPERFAMILY SSF143517 1004 1149 3.4E-29 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Gene3D G3DSA:3.40.50.11180 59 329 2.4E-61 T 11-10-2018 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 34 1104 24.605 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Pfam PF02559 CarD-like/TRCF domain 491 582 4.5E-21 T 11-10-2018 IPR003711 CarD-like/TRCF domain AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SMART SM00487 608 805 5.2E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Gene3D G3DSA:3.40.50.300 551 790 1.2E-198 T 11-10-2018 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Pfam PF00270 DEAD/DEAH box helicase 615 773 2.6E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SMART SM00982 1014 1114 4.5E-30 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Gene3D G3DSA:3.90.1150.50 1010 1149 8.9E-24 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SMART SM00490 835 919 4.8E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Pfam PF03461 TRCF domain 1016 1101 4.8E-23 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SUPERFAMILY SSF52540 791 999 9.24E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 Gene3D G3DSA:3.40.50.300 491 997 1.2E-198 T 11-10-2018 AM125 44c81e8c9fe5d1d08a06e23310c0d322 1152 SUPERFAMILY SSF52540 535 792 2.6E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM190 bb43115aa30768e80661f182ba49b94d 179 Gene3D G3DSA:1.10.760.10 40 173 1.3E-37 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 SUPERFAMILY SSF46626 73 175 1.11E-29 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 Pfam PF00034 Cytochrome c 77 174 3.2E-8 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 PRINTS PR00604 Class IA and IB cytochrome C signature 147 157 5.5E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 PRINTS PR00604 Class IA and IB cytochrome C signature 164 172 5.5E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 PRINTS PR00604 Class IA and IB cytochrome C signature 85 92 5.5E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 PRINTS PR00604 Class IA and IB cytochrome C signature 98 113 5.5E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 PRINTS PR00604 Class IA and IB cytochrome C signature 114 124 5.5E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM190 bb43115aa30768e80661f182ba49b94d 179 PRINTS PR00604 Class IA and IB cytochrome C signature 128 144 5.5E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM096 531ed25224548cb34e52535d75db180a 115 ProSitePatterns PS00194 Thioredoxin family active site. 28 46 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM096 531ed25224548cb34e52535d75db180a 115 PRINTS PR00421 Thioredoxin family signature 35 44 1.9E-8 T 11-10-2018 AM096 531ed25224548cb34e52535d75db180a 115 PRINTS PR00421 Thioredoxin family signature 75 86 1.9E-8 T 11-10-2018 AM096 531ed25224548cb34e52535d75db180a 115 PRINTS PR00421 Thioredoxin family signature 27 35 1.9E-8 T 11-10-2018 AM096 531ed25224548cb34e52535d75db180a 115 SUPERFAMILY SSF52833 5 110 5.08E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM096 531ed25224548cb34e52535d75db180a 115 TIGRFAM TIGR01068 thioredoxin: thioredoxin 14 101 5.5E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM096 531ed25224548cb34e52535d75db180a 115 Pfam PF00085 Thioredoxin 9 106 9.2E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 AM096 531ed25224548cb34e52535d75db180a 115 Gene3D G3DSA:3.40.30.10 2 110 2.6E-31 T 11-10-2018 AM096 531ed25224548cb34e52535d75db180a 115 PIRSF PIRSF000077 5 110 1.0E-34 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AM1275 c74bc1456f1328d8a29e8ecab6b45c2f 151 SUPERFAMILY SSF52540 31 123 2.88E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1275 c74bc1456f1328d8a29e8ecab6b45c2f 151 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 22 136 1.7E-25 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM1275 c74bc1456f1328d8a29e8ecab6b45c2f 151 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 19 144 5.3E-25 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AM1275 c74bc1456f1328d8a29e8ecab6b45c2f 151 Gene3D G3DSA:3.40.50.300 14 151 2.0E-27 T 11-10-2018 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Gene3D G3DSA:3.40.50.10750 572 721 3.1E-82 T 11-10-2018 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Gene3D G3DSA:3.40.50.720 163 441 5.0E-79 T 11-10-2018 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Pfam PF00390 Malic enzyme, N-terminal domain 22 152 3.4E-24 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 PIRSF PIRSF036684 3 749 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Gene3D G3DSA:3.40.50.10950 445 744 3.1E-82 T 11-10-2018 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 SUPERFAMILY SSF53223 12 163 6.12E-51 T 11-10-2018 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 SUPERFAMILY SSF53659 432 746 4.93E-74 T 11-10-2018 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Pfam PF03949 Malic enzyme, NAD binding domain 167 358 5.4E-19 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 SMART SM01274 20 153 3.9E-76 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 SMART SM00919 165 402 5.2E-134 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Pfam PF01515 Phosphate acetyl/butaryl transferase 436 744 6.1E-75 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 ProSitePatterns PS00331 Malic enzymes signature. 161 177 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 Gene3D G3DSA:3.40.50.10380 2 162 5.2E-64 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 AM024 2c061ee757bc04dc73c30de3dc282ea0 750 SUPERFAMILY SSF51735 165 444 3.82E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1305 1d48b5c3b0dc75be1a71cb87ac1a8fd9 419 Pfam PF04860 Phage portal protein 69 404 1.8E-85 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein AM1305 1d48b5c3b0dc75be1a71cb87ac1a8fd9 419 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 61 411 3.0E-66 T 11-10-2018 IPR006427 Phage portal protein, HK97 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 87 111 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 125 139 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 351 373 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 141 151 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 194 214 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 388 405 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 PRINTS PR00906 SecA protein signature 425 438 4.0E-64 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 SUPERFAMILY SSF52540 429 636 3.41E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1120 1bf3ae1479edaa9863b562501d5075a1 896 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 52 832 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Pfam PF02810 SEC-C motif 875 892 1.5E-9 T 11-10-2018 IPR004027 SEC-C motif AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Hamap MF_01382 Protein translocase subunit SecA [secA]. 28 849 19.071 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Gene3D G3DSA:3.90.1440.10 253 380 1.1E-168 T 11-10-2018 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Gene3D G3DSA:3.40.50.300 429 637 9.1E-86 T 11-10-2018 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 SUPERFAMILY SSF81886 638 883 6.67E-60 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily AM1120 1bf3ae1479edaa9863b562501d5075a1 896 SUPERFAMILY SSF52540 45 427 1.64E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Gene3D G3DSA:3.40.50.300 46 427 1.1E-168 T 11-10-2018 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 SMART SM00958 252 370 3.9E-71 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Pfam PF07517 SecA DEAD-like domain 44 413 2.4E-123 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 SUPERFAMILY SSF81767 251 380 1.06E-40 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Pfam PF01043 SecA preprotein cross-linking domain 257 370 1.2E-36 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Gene3D G3DSA:1.10.3060.10 639 849 7.9E-48 T 11-10-2018 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 Pfam PF07516 SecA Wing and Scaffold domain 635 846 4.5E-50 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 ProSitePatterns PS01312 SecA family signature. 512 527 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 AM1120 1bf3ae1479edaa9863b562501d5075a1 896 SMART SM00957 29 414 6.8E-270 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 SUPERFAMILY SSF52374 7 162 5.63E-38 T 11-10-2018 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 160 7.5E-54 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.4E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.4E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 118 140 4.4E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 4.4E-35 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 60 2.8E-15 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 Gene3D G3DSA:3.40.50.620 5 166 3.6E-49 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM509 fedd5cf25daff10a878b6fa157bd8f49 170 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 164 31.519 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 AM509 fedd5cf25daff10a878b6fa157bd8f49 170 Pfam PF01467 Cytidylyltransferase-like 10 139 1.9E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM581 82347f0a5a86db90ed92112f6d59a2f7 184 Pfam PF05135 Phage gp6-like head-tail connector protein 21 116 9.0E-16 T 11-10-2018 IPR021146 Phage gp6-like head-tail connector protein AM581 82347f0a5a86db90ed92112f6d59a2f7 184 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 10 168 9.5E-18 T 11-10-2018 IPR011738 Phage conserved hypothetical protein AM700 2b6b6642f19ab0a93831957738dac0db 303 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 294 6.9E-109 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 Gene3D G3DSA:3.40.190.10 6 210 4.6E-77 T 11-10-2018 AM700 2b6b6642f19ab0a93831957738dac0db 303 SUPERFAMILY SSF53850 6 218 2.39E-76 T 11-10-2018 AM700 2b6b6642f19ab0a93831957738dac0db 303 Gene3D G3DSA:3.40.190.10 103 202 4.6E-77 T 11-10-2018 AM700 2b6b6642f19ab0a93831957738dac0db 303 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 2.5E-70 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 9.0E-11 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 34.605 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 SUPERFAMILY SSF54782 220 297 2.09E-16 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 Gene3D G3DSA:3.30.160.40 221 300 8.5E-13 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 PIRSF PIRSF001438 1 301 1.2E-105 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.3E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 2.3E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 2.3E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 2.3E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM700 2b6b6642f19ab0a93831957738dac0db 303 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 2.3E-37 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM999 1eb52ff58bb64d096a947d2370df80f9 482 SUPERFAMILY SSF52540 52 478 5.83E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM999 1eb52ff58bb64d096a947d2370df80f9 482 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 50 482 1.7E-168 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 AM999 1eb52ff58bb64d096a947d2370df80f9 482 Pfam PF07724 AAA domain (Cdc48 subfamily) 239 368 3.8E-35 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM999 1eb52ff58bb64d096a947d2370df80f9 482 Gene3D G3DSA:1.10.8.60 374 479 4.5E-39 T 11-10-2018 AM999 1eb52ff58bb64d096a947d2370df80f9 482 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 99 174 7.1E-6 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM999 1eb52ff58bb64d096a947d2370df80f9 482 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 374 444 6.2E-6 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM999 1eb52ff58bb64d096a947d2370df80f9 482 SMART SM01086 374 468 1.6E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM999 1eb52ff58bb64d096a947d2370df80f9 482 SMART SM00382 95 371 1.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AM568 e5b854fb29ee87fd6a0d347810aa71d0 189 Gene3D G3DSA:2.40.30.10 9 123 1.5E-37 T 11-10-2018 AM568 e5b854fb29ee87fd6a0d347810aa71d0 189 Pfam PF11987 Translation-initiation factor 2 137 169 2.0E-5 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM568 e5b854fb29ee87fd6a0d347810aa71d0 189 Gene3D G3DSA:3.40.50.10050 137 174 4.7E-6 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AM568 e5b854fb29ee87fd6a0d347810aa71d0 189 SUPERFAMILY SSF50447 12 95 1.03E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM735 1e13179bb92dd8b0dd99a833df503e71 832 SUPERFAMILY SSF50447 504 587 1.41E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM735 1e13179bb92dd8b0dd99a833df503e71 832 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 248 829 2.6E-198 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM735 1e13179bb92dd8b0dd99a833df503e71 832 Gene3D G3DSA:2.40.30.10 503 614 2.8E-36 T 11-10-2018 AM735 1e13179bb92dd8b0dd99a833df503e71 832 ProSitePatterns PS01176 Initiation factor 2 signature. 782 804 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM735 1e13179bb92dd8b0dd99a833df503e71 832 Pfam PF11987 Translation-initiation factor 2 629 721 6.8E-32 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 AM735 1e13179bb92dd8b0dd99a833df503e71 832 Gene3D G3DSA:2.40.30.10 733 830 3.3E-24 T 11-10-2018 AM735 1e13179bb92dd8b0dd99a833df503e71 832 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 25 829 14.911 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 AM735 1e13179bb92dd8b0dd99a833df503e71 832 SUPERFAMILY SSF52540 330 501 2.61E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM735 1e13179bb92dd8b0dd99a833df503e71 832 Pfam PF00009 Elongation factor Tu GTP binding domain 336 491 1.8E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM735 1e13179bb92dd8b0dd99a833df503e71 832 SUPERFAMILY SSF52156 628 738 6.28E-32 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AM735 1e13179bb92dd8b0dd99a833df503e71 832 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 334 486 2.9E-32 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM735 1e13179bb92dd8b0dd99a833df503e71 832 Gene3D G3DSA:3.40.50.10050 626 732 7.9E-34 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily AM735 1e13179bb92dd8b0dd99a833df503e71 832 Gene3D G3DSA:3.40.50.300 328 502 3.3E-69 T 11-10-2018 AM735 1e13179bb92dd8b0dd99a833df503e71 832 SUPERFAMILY SSF50447 733 829 1.51E-25 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 SUPERFAMILY SSF111369 82 297 4.32E-28 T 11-10-2018 AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 Gene3D G3DSA:2.40.30.170 82 301 3.8E-42 T 11-10-2018 AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 Gene3D G3DSA:1.10.287.470 127 186 3.8E-42 T 11-10-2018 AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 Gene3D G3DSA:2.40.420.20 302 369 3.8E-42 T 11-10-2018 AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 86 285 9.9E-19 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 70 370 2.7E-36 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 AM796 2a11191ca53d95fc031fec34c7b9f1fa 371 Gene3D G3DSA:2.40.50.100 92 220 3.8E-42 T 11-10-2018 AM1337 74a93af5ba365da9af7829dc7dab8d23 326 SUPERFAMILY SSF51735 10 259 1.66E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1337 74a93af5ba365da9af7829dc7dab8d23 326 Gene3D G3DSA:3.40.50.720 3 259 3.2E-39 T 11-10-2018 AM1337 74a93af5ba365da9af7829dc7dab8d23 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 13 213 5.4E-13 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 AM118 73bf48d813a913620dfc6e92ebc888d0 440 Gene3D G3DSA:3.10.450.350 173 410 3.0E-66 T 11-10-2018 AM118 73bf48d813a913620dfc6e92ebc888d0 440 Gene3D G3DSA:2.70.70.10 275 408 3.0E-66 T 11-10-2018 IPR011055 Duplicated hybrid motif AM118 73bf48d813a913620dfc6e92ebc888d0 440 Pfam PF01551 Peptidase family M23 306 402 1.1E-31 T 11-10-2018 IPR016047 Peptidase M23 AM118 73bf48d813a913620dfc6e92ebc888d0 440 SUPERFAMILY SSF51261 160 404 1.05E-58 T 11-10-2018 IPR011055 Duplicated hybrid motif AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 323 8.8E-92 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 Gene3D G3DSA:3.40.50.620 1 313 7.1E-94 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 300 9.9E-68 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 Gene3D G3DSA:1.10.10.350 358 441 2.1E-10 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 9.3E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 9.3E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 9.3E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 9.3E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 9.3E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 SUPERFAMILY SSF52374 2 292 5.36E-85 T 11-10-2018 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 SUPERFAMILY SSF48163 278 441 2.88E-26 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM039 853ce5e8bdeeb3f34a1e82b9ac54017d 441 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 441 23.845 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 88.219 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 460 6.6E-224 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 Pfam PF00206 Lyase 11 341 7.6E-113 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AM937 7539011302ea2dbdfbf6cc14bdc22686 462 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 Gene3D G3DSA:1.20.200.10 138 405 6.7E-119 T 11-10-2018 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 Gene3D G3DSA:1.10.40.30 407 461 4.1E-22 T 11-10-2018 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 Pfam PF10415 Fumarase C C-terminus 407 459 5.7E-20 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.2E-35 T 11-10-2018 IPR000362 Fumarate lyase family AM937 7539011302ea2dbdfbf6cc14bdc22686 462 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 1.2E-35 T 11-10-2018 IPR000362 Fumarate lyase family AM937 7539011302ea2dbdfbf6cc14bdc22686 462 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 1.2E-35 T 11-10-2018 IPR000362 Fumarate lyase family AM937 7539011302ea2dbdfbf6cc14bdc22686 462 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 1.2E-35 T 11-10-2018 IPR000362 Fumarate lyase family AM937 7539011302ea2dbdfbf6cc14bdc22686 462 SUPERFAMILY SSF48557 3 459 1.08E-155 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM937 7539011302ea2dbdfbf6cc14bdc22686 462 Gene3D G3DSA:1.10.275.10 4 137 1.5E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AM890 becb16116749c6217d5506660e94689f 123 Gene3D G3DSA:1.10.8.50 1 72 3.3E-24 T 11-10-2018 AM890 becb16116749c6217d5506660e94689f 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 8.8E-28 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM890 becb16116749c6217d5506660e94689f 123 PIRSF PIRSF002134 1 123 3.6E-39 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM890 becb16116749c6217d5506660e94689f 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.7E-50 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM890 becb16116749c6217d5506660e94689f 123 SUPERFAMILY SSF46946 2 120 5.49E-42 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM890 becb16116749c6217d5506660e94689f 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 25.382 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM890 becb16116749c6217d5506660e94689f 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM890 becb16116749c6217d5506660e94689f 123 Gene3D G3DSA:4.10.910.10 73 118 6.8E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM173 57b40184194cc83057b443a72422ac32 190 SUPERFAMILY SSF50249 1 64 4.23E-9 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM173 57b40184194cc83057b443a72422ac32 190 Gene3D G3DSA:1.10.150.20 68 142 3.4E-15 T 11-10-2018 AM173 57b40184194cc83057b443a72422ac32 190 SUPERFAMILY SSF46929 148 189 2.09E-5 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily AM173 57b40184194cc83057b443a72422ac32 190 Pfam PF14520 Helix-hairpin-helix domain 74 128 1.4E-9 T 11-10-2018 AM173 57b40184194cc83057b443a72422ac32 190 Gene3D G3DSA:1.10.8.10 143 188 4.8E-5 T 11-10-2018 AM173 57b40184194cc83057b443a72422ac32 190 SUPERFAMILY SSF47781 67 138 2.17E-15 T 11-10-2018 IPR010994 RuvA domain 2-like AM173 57b40184194cc83057b443a72422ac32 190 Pfam PF07499 RuvA, C-terminal domain 148 189 6.2E-8 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 AM173 57b40184194cc83057b443a72422ac32 190 Gene3D G3DSA:2.40.50.140 1 66 3.7E-13 T 11-10-2018 AM173 57b40184194cc83057b443a72422ac32 190 Pfam PF01330 RuvA N terminal domain 1 63 2.9E-14 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AM173 57b40184194cc83057b443a72422ac32 190 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 189 21.249 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 Gene3D G3DSA:1.10.150.570 576 628 8.9E-21 T 11-10-2018 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 Pfam PF01134 Glucose inhibited division protein A 14 407 1.1E-152 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 SUPERFAMILY SSF51905 12 270 1.04E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM961 95b6b6181bb6c055fef5e5dd257207cc 637 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 283 297 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 Pfam PF13932 GidA associated domain 412 622 3.1E-71 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 378 401 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 170 7.5E-6 T 11-10-2018 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 7.5E-6 T 11-10-2018 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 11 631 39.208 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 Gene3D G3DSA:3.50.50.60 6 231 1.5E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM961 95b6b6181bb6c055fef5e5dd257207cc 637 Gene3D G3DSA:3.50.50.60 304 469 2.6E-58 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM961 95b6b6181bb6c055fef5e5dd257207cc 637 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 13 627 1.4E-235 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 AM961 95b6b6181bb6c055fef5e5dd257207cc 637 SMART SM01228 553 624 5.7E-34 T 11-10-2018 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 SUPERFAMILY SSF82771 30 113 1.01E-19 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 SMART SM00278 554 573 220.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 SMART SM00278 586 605 0.14 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Gene3D G3DSA:3.30.420.340 385 550 3.0E-46 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 SMART SM00465 30 111 1.3E-19 T 11-10-2018 IPR000305 GIY-YIG endonuclease AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Gene3D G3DSA:3.40.1440.10 16 115 3.8E-27 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Pfam PF14520 Helix-hairpin-helix domain 556 607 4.5E-9 T 11-10-2018 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Pfam PF01541 GIY-YIG catalytic domain 32 106 1.8E-8 T 11-10-2018 IPR000305 GIY-YIG endonuclease AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 392 540 7.6E-43 T 11-10-2018 IPR001162 UvrC family homology region AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Hamap MF_00203 UvrABC system protein C [uvrC]. 16 605 24.573 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 21 586 3.2E-144 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 SUPERFAMILY SSF47781 519 608 2.45E-18 T 11-10-2018 IPR010994 RuvA domain 2-like AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Pfam PF02151 UvrB/uvrC motif 218 251 5.3E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 Gene3D G3DSA:1.10.150.20 554 608 7.9E-19 T 11-10-2018 AM385 73c09668eb15b32ab4ac77d9bed7a88e 613 SUPERFAMILY SSF46600 205 254 1.06E-9 T 11-10-2018 IPR036876 UVR domain superfamily AM447 3073ad3dce43b004e8c6c63c9627cc99 262 PIRSF PIRSF005902 1 256 3.0E-73 T 11-10-2018 IPR001130 TatD family GO:0016788 AM447 3073ad3dce43b004e8c6c63c9627cc99 262 Gene3D G3DSA:3.20.20.140 1 259 3.7E-81 T 11-10-2018 AM447 3073ad3dce43b004e8c6c63c9627cc99 262 SUPERFAMILY SSF51556 2 253 1.15E-77 T 11-10-2018 IPR032466 Metal-dependent hydrolase AM447 3073ad3dce43b004e8c6c63c9627cc99 262 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AM447 3073ad3dce43b004e8c6c63c9627cc99 262 Pfam PF01026 TatD related DNase 3 252 4.0E-72 T 11-10-2018 IPR001130 TatD family GO:0016788 AM447 3073ad3dce43b004e8c6c63c9627cc99 262 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 1.2E-80 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 AM054 afa9297aaa04d58915b02059b48cefa8 128 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 113 1.7E-45 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 SUPERFAMILY SSF74731 3 113 4.58E-47 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 Pfam PF00453 Ribosomal protein L20 3 108 1.9E-46 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 Gene3D G3DSA:1.10.1900.20 56 117 3.1E-27 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 Gene3D G3DSA:1.10.720.90 2 55 5.1E-22 T 11-10-2018 AM054 afa9297aaa04d58915b02059b48cefa8 128 PRINTS PR00062 Ribosomal protein L20 signature 42 71 7.6E-35 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 PRINTS PR00062 Ribosomal protein L20 signature 75 101 7.6E-35 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 PRINTS PR00062 Ribosomal protein L20 signature 12 41 7.6E-35 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 71 1.0E-12 T 11-10-2018 AM054 afa9297aaa04d58915b02059b48cefa8 128 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.074 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM054 afa9297aaa04d58915b02059b48cefa8 128 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.4E-15 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.4E-15 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.4E-15 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 20.779 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 SUPERFAMILY SSF54570 2 84 7.85E-28 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 PIRSF PIRSF002144 1 92 1.3E-28 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 Gene3D G3DSA:3.30.860.10 1 92 3.9E-31 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 5.5E-31 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM908 9d9bf35369987610d6b0f0fcbd647a40 93 Pfam PF00203 Ribosomal protein S19 3 83 4.2E-27 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM434 669bd80668e2a8bb84a23f59901675dd 253 SUPERFAMILY SSF63892 16 249 8.5E-85 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM434 669bd80668e2a8bb84a23f59901675dd 253 Gene3D G3DSA:3.20.20.70 10 253 8.7E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM434 669bd80668e2a8bb84a23f59901675dd 253 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 17 246 9.6E-86 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM434 669bd80668e2a8bb84a23f59901675dd 253 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 251 92.514 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM434 669bd80668e2a8bb84a23f59901675dd 253 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 18 247 1.3E-72 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 AM820 99be7730d273e92684fd5d68e2e7c226 313 SUPERFAMILY SSF102114 33 295 3.66E-63 T 11-10-2018 AM820 99be7730d273e92684fd5d68e2e7c226 313 PIRSF PIRSF005963 12 312 2.4E-132 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM820 99be7730d273e92684fd5d68e2e7c226 313 TIGRFAM TIGR00510 lipA: lipoyl synthase 20 300 6.7E-113 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM820 99be7730d273e92684fd5d68e2e7c226 313 Pfam PF04055 Radical SAM superfamily 75 234 1.2E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM820 99be7730d273e92684fd5d68e2e7c226 313 Gene3D G3DSA:3.20.20.70 61 281 1.5E-20 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM820 99be7730d273e92684fd5d68e2e7c226 313 SMART SM00729 68 275 6.5E-12 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM820 99be7730d273e92684fd5d68e2e7c226 313 Hamap MF_00206 Lipoyl synthase [lipA]. 1 309 143.364 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 Gene3D G3DSA:3.20.20.220 131 514 4.3E-118 T 11-10-2018 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 PIRSF PIRSF000197 2 1043 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 SUPERFAMILY SSF81935 9 177 5.49E-59 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 Pfam PF00171 Aldehyde dehydrogenase family 565 1028 1.7E-121 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 SUPERFAMILY SSF53720 532 1031 4.97E-130 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 Gene3D G3DSA:3.40.309.10 800 995 3.9E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 Pfam PF01619 Proline dehydrogenase 185 478 2.6E-83 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 65 176 4.4E-39 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 514 1024 2.3E-197 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 SUPERFAMILY SSF51730 179 521 3.92E-103 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like AM583 2c39f9bf2fafca8a9dedd967b4190ff4 1047 Gene3D G3DSA:3.40.605.10 537 1028 3.9E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 AM105 47bb08403ba4410348791f38f817c2f2 493 PIRSF PIRSF000130 2 488 3.4E-196 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM105 47bb08403ba4410348791f38f817c2f2 493 SMART SM00116 159 207 3.4E-5 T 11-10-2018 IPR000644 CBS domain AM105 47bb08403ba4410348791f38f817c2f2 493 SMART SM00116 97 146 2.0E-10 T 11-10-2018 IPR000644 CBS domain AM105 47bb08403ba4410348791f38f817c2f2 493 Gene3D G3DSA:3.20.20.70 2 486 3.0E-201 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM105 47bb08403ba4410348791f38f817c2f2 493 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 9 454 4.8E-186 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM105 47bb08403ba4410348791f38f817c2f2 493 SUPERFAMILY SSF54631 65 205 2.27E-32 T 11-10-2018 AM105 47bb08403ba4410348791f38f817c2f2 493 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 473 9.6E-153 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 AM105 47bb08403ba4410348791f38f817c2f2 493 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 486 78.745 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 AM105 47bb08403ba4410348791f38f817c2f2 493 SUPERFAMILY SSF51412 6 477 1.44E-118 T 11-10-2018 AM105 47bb08403ba4410348791f38f817c2f2 493 SMART SM01240 8 473 2.4E-295 T 11-10-2018 AM105 47bb08403ba4410348791f38f817c2f2 493 Pfam PF00571 CBS domain 151 202 2.0E-7 T 11-10-2018 IPR000644 CBS domain AM105 47bb08403ba4410348791f38f817c2f2 493 Pfam PF00571 CBS domain 96 143 1.0E-11 T 11-10-2018 IPR000644 CBS domain AM105 47bb08403ba4410348791f38f817c2f2 493 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 AM412 8c96d6bc07a186efab66841280f1aca8 819 Gene3D G3DSA:1.10.1420.10 394 509 1.2E-76 T 11-10-2018 AM412 8c96d6bc07a186efab66841280f1aca8 819 Gene3D G3DSA:3.40.50.300 574 814 4.2E-93 T 11-10-2018 AM412 8c96d6bc07a186efab66841280f1aca8 819 SUPERFAMILY SSF52540 573 800 1.77E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM412 8c96d6bc07a186efab66841280f1aca8 819 Pfam PF00488 MutS domain V 614 798 1.6E-78 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 SUPERFAMILY SSF53150 118 273 1.19E-35 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 Pfam PF05190 MutS family domain IV 437 524 6.9E-14 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 Gene3D G3DSA:3.40.1170.10 1 125 1.3E-42 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM412 8c96d6bc07a186efab66841280f1aca8 819 Pfam PF01624 MutS domain I 11 123 1.8E-37 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM412 8c96d6bc07a186efab66841280f1aca8 819 SMART SM00533 290 597 1.2E-75 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 Gene3D G3DSA:1.10.1420.10 273 565 1.2E-76 T 11-10-2018 AM412 8c96d6bc07a186efab66841280f1aca8 819 SUPERFAMILY SSF48334 274 571 9.16E-75 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily AM412 8c96d6bc07a186efab66841280f1aca8 819 SUPERFAMILY SSF55271 4 119 1.96E-38 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 AM412 8c96d6bc07a186efab66841280f1aca8 819 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 11 806 2.2E-239 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 Pfam PF05192 MutS domain III 276 565 2.2E-38 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 Gene3D G3DSA:3.30.420.110 131 265 3.3E-28 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 PIRSF PIRSF037677 1 810 1.8E-167 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 SMART SM00534 611 798 1.2E-108 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AM412 8c96d6bc07a186efab66841280f1aca8 819 Pfam PF05188 MutS domain II 132 259 1.2E-22 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AM1236 cb7b9aae27944f936285efff6fb08596 185 PRINTS PR01576 Peptide deformylase signature 109 120 1.4E-33 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 PRINTS PR01576 Peptide deformylase signature 35 64 1.4E-33 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 PRINTS PR01576 Peptide deformylase signature 121 139 1.4E-33 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 PRINTS PR01576 Peptide deformylase signature 140 169 1.4E-33 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 SUPERFAMILY SSF56420 2 183 6.8E-54 T 11-10-2018 IPR036821 Peptide deformylase superfamily AM1236 cb7b9aae27944f936285efff6fb08596 185 Pfam PF01327 Polypeptide deformylase 5 172 1.1E-47 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 Gene3D G3DSA:3.90.45.10 1 185 1.1E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily AM1236 cb7b9aae27944f936285efff6fb08596 185 Hamap MF_00163 Peptide deformylase [def]. 2 182 28.105 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 PIRSF PIRSF004749 1 185 3.4E-49 T 11-10-2018 IPR023635 Peptide deformylase AM1236 cb7b9aae27944f936285efff6fb08596 185 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 178 3.0E-43 T 11-10-2018 IPR023635 Peptide deformylase AM436 28afdf938e305003a341a60ca1f48180 197 Pfam PF01300 Telomere recombination 6 178 6.2E-44 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AM436 28afdf938e305003a341a60ca1f48180 197 SUPERFAMILY SSF55821 2 183 1.77E-46 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AM436 28afdf938e305003a341a60ca1f48180 197 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 2 186 1.8E-43 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 AM436 28afdf938e305003a341a60ca1f48180 197 Gene3D G3DSA:3.90.870.10 1 193 9.1E-48 T 11-10-2018 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 1.0E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 1.0E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 1.0E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 1.0E-15 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 75 17.137 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 Pfam PF01084 Ribosomal protein S18 23 72 1.2E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 Gene3D G3DSA:4.10.640.10 3 75 2.4E-23 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 8 74 2.2E-23 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 74 9.0E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161.5 8f6f8db9f310368d3ba2be8f8606c9c6 75 SUPERFAMILY SSF46911 5 75 8.63E-24 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM007 256f7f751b4a78634dd2c3e33704b443 124 SUPERFAMILY SSF46955 21 119 2.61E-14 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily AM007 256f7f751b4a78634dd2c3e33704b443 124 Gene3D G3DSA:1.10.1660.10 14 89 5.5E-17 T 11-10-2018 AM007 256f7f751b4a78634dd2c3e33704b443 124 Pfam PF13411 MerR HTH family regulatory protein 21 86 5.0E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM007 256f7f751b4a78634dd2c3e33704b443 124 SMART SM00422 20 89 0.0072 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Pfam PF07498 Rho termination factor, N-terminal domain 44 82 5.9E-7 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Gene3D G3DSA:3.40.50.300 169 459 1.5E-123 T 11-10-2018 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 SUPERFAMILY SSF68912 40 85 1.26E-7 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Pfam PF07497 Rho termination factor, RNA-binding domain 92 162 2.1E-25 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Gene3D G3DSA:1.10.720.10 39 85 1.2E-8 T 11-10-2018 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Gene3D G3DSA:2.40.50.140 86 162 1.2E-27 T 11-10-2018 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 SMART SM00357 91 157 4.7E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Hamap MF_01884 Transcription termination factor Rho [rho]. 40 460 204.696 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 201 405 1.7E-27 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 TIGRFAM TIGR00767 rho: transcription termination factor Rho 42 459 5.9E-193 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 SUPERFAMILY SSF50249 90 161 2.51E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 SMART SM00959 44 86 1.7E-9 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 SMART SM00382 212 392 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AM992 3c5fd3bd6e374d8095a28cec08e110c6 460 SUPERFAMILY SSF52540 130 413 4.54E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM006 c91dd9e43c7d4945c065158e34fcfcb2 98 Pfam PF00216 Bacterial DNA-binding protein 5 94 1.3E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM006 c91dd9e43c7d4945c065158e34fcfcb2 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 AM006 c91dd9e43c7d4945c065158e34fcfcb2 98 SUPERFAMILY SSF47729 5 95 8.39E-23 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM006 c91dd9e43c7d4945c065158e34fcfcb2 98 SMART SM00411 5 94 4.0E-15 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 AM006 c91dd9e43c7d4945c065158e34fcfcb2 98 Gene3D G3DSA:4.10.520.10 3 98 2.8E-22 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 AM552 018f858f107989eeba471a7e498d4ee3 317 SUPERFAMILY SSF56042 141 302 5.53E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM552 018f858f107989eeba471a7e498d4ee3 317 SUPERFAMILY SSF55326 3 135 1.59E-28 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM552 018f858f107989eeba471a7e498d4ee3 317 Pfam PF00586 AIR synthase related protein, N-terminal domain 24 135 3.1E-20 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AM552 018f858f107989eeba471a7e498d4ee3 317 Gene3D G3DSA:3.30.1330.10 1 135 2.2E-32 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM552 018f858f107989eeba471a7e498d4ee3 317 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 315 4.2E-84 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM552 018f858f107989eeba471a7e498d4ee3 317 Gene3D G3DSA:3.90.650.10 142 316 5.6E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM552 018f858f107989eeba471a7e498d4ee3 317 PIRSF PIRSF005303 1 316 1.8E-89 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM552 018f858f107989eeba471a7e498d4ee3 317 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 316 25.997 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 AM552 018f858f107989eeba471a7e498d4ee3 317 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 299 4.1E-9 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AM804 f0c78836e2ef5fd8b8e32b20a0cff003 342 Gene3D G3DSA:3.40.50.11270 47 133 2.0E-107 T 11-10-2018 AM804 f0c78836e2ef5fd8b8e32b20a0cff003 342 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 37 316 6.8E-96 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM804 f0c78836e2ef5fd8b8e32b20a0cff003 342 Gene3D G3DSA:3.40.1010.20 42 316 2.0E-107 T 11-10-2018 AM804 f0c78836e2ef5fd8b8e32b20a0cff003 342 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 36 320 36.705 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM804 f0c78836e2ef5fd8b8e32b20a0cff003 342 Pfam PF02401 LytB protein 38 316 9.6E-90 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 AM804 f0c78836e2ef5fd8b8e32b20a0cff003 342 Gene3D G3DSA:3.40.1010.20 134 230 2.0E-107 T 11-10-2018 AM559 8496c38aea7c7b5c94a9c4226f5cfe67 268 Pfam PF00121 Triosephosphate isomerase 31 262 1.9E-57 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM559 8496c38aea7c7b5c94a9c4226f5cfe67 268 SUPERFAMILY SSF51351 28 265 1.28E-65 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM559 8496c38aea7c7b5c94a9c4226f5cfe67 268 Gene3D G3DSA:3.20.20.70 18 267 2.0E-68 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM1272 aa44eb9ec4809420482ed46691b23d6f 173 SUPERFAMILY SSF142433 6 168 3.92E-37 T 11-10-2018 IPR036653 CinA-like, C-terminal AM1272 aa44eb9ec4809420482ed46691b23d6f 173 Gene3D G3DSA:3.90.950.20 2 173 5.0E-42 T 11-10-2018 IPR036653 CinA-like, C-terminal AM1272 aa44eb9ec4809420482ed46691b23d6f 173 Pfam PF02464 Competence-damaged protein 12 167 1.1E-37 T 11-10-2018 IPR008136 CinA, C-terminal AM1272 aa44eb9ec4809420482ed46691b23d6f 173 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 15 167 5.6E-27 T 11-10-2018 IPR008136 CinA, C-terminal AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 SUPERFAMILY SSF51569 15 344 1.61E-123 T 11-10-2018 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 140 154 1.5E-47 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 170 189 1.5E-47 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 208 227 1.5E-47 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 317 336 1.5E-47 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 287 302 1.5E-47 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 262 278 1.5E-47 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 PIRSF PIRSF001415 15 346 8.4E-128 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 SMART SM01004 22 343 3.0E-189 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 Pfam PF00490 Delta-aminolevulinic acid dehydratase 25 341 1.3E-122 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 AM417 3342bcd1d5081f8e1f7d40bdd5651080 346 Gene3D G3DSA:3.20.20.70 6 346 4.6E-128 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM969 848764aa4f049227eb19cccda7ddfa61 324 Hamap MF_01694 Biotin synthase [bioB]. 4 312 42.33 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM969 848764aa4f049227eb19cccda7ddfa61 324 SUPERFAMILY SSF102114 4 311 4.84E-87 T 11-10-2018 AM969 848764aa4f049227eb19cccda7ddfa61 324 Pfam PF04055 Radical SAM superfamily 50 200 7.3E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM969 848764aa4f049227eb19cccda7ddfa61 324 SMART SM00729 42 254 2.4E-35 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM969 848764aa4f049227eb19cccda7ddfa61 324 Gene3D G3DSA:3.20.20.70 3 314 1.7E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM969 848764aa4f049227eb19cccda7ddfa61 324 TIGRFAM TIGR00433 bioB: biotin synthase 13 309 3.0E-121 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM969 848764aa4f049227eb19cccda7ddfa61 324 SMART SM00876 219 311 2.5E-47 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM969 848764aa4f049227eb19cccda7ddfa61 324 PIRSF PIRSF001619 1 318 1.8E-129 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM969 848764aa4f049227eb19cccda7ddfa61 324 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 219 309 4.7E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 SUPERFAMILY SSF74982 2 128 5.89E-45 T 11-10-2018 IPR023620 Small protein B AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 62.754 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 TIGRFAM TIGR00086 smpB: SsrA-binding protein 4 144 2.1E-53 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 ProSitePatterns PS01317 SsrA-binding protein. 22 34 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 Pfam PF01668 SmpB protein 4 146 3.0E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 128 2.0E-46 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 AM1171 27ebe58ba3d5dd3146dd3e421cd636d6 149 Gene3D G3DSA:2.40.280.10 1 125 2.4E-44 T 11-10-2018 IPR023620 Small protein B AM151 33174dcd47e186ac5334fcd0e7224327 401 Pfam PF01612 3'-5' exonuclease 11 174 5.2E-32 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM151 33174dcd47e186ac5334fcd0e7224327 401 Gene3D G3DSA:3.30.420.10 2 200 1.7E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM151 33174dcd47e186ac5334fcd0e7224327 401 SMART SM00474 4 178 3.9E-20 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM151 33174dcd47e186ac5334fcd0e7224327 401 SUPERFAMILY SSF53098 5 200 6.42E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM151 33174dcd47e186ac5334fcd0e7224327 401 SUPERFAMILY SSF47819 299 364 1.66E-9 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 SUPERFAMILY SSF56235 6 237 3.0E-59 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 Gene3D G3DSA:3.40.50.10490 447 593 4.8E-116 T 11-10-2018 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 Pfam PF01380 SIS domain 462 589 2.0E-20 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 Pfam PF01380 SIS domain 295 413 1.6E-27 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 Pfam PF13522 Glutamine amidotransferase domain 65 172 2.4E-18 T 11-10-2018 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 Gene3D G3DSA:3.40.50.10490 253 607 4.8E-116 T 11-10-2018 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 6 608 1.4E-199 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 Gene3D G3DSA:3.60.20.10 6 242 7.8E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM1013 6131a053f60bacbb4ee98ec2f70c32c2 608 SUPERFAMILY SSF53697 249 608 1.02E-91 T 11-10-2018 AM1126 249efee9f1ead48af167d14e46e57ea4 137 Gene3D G3DSA:1.20.120.910 2 133 1.1E-35 T 11-10-2018 AM1126 249efee9f1ead48af167d14e46e57ea4 137 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 126 1.0E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 AM1126 249efee9f1ead48af167d14e46e57ea4 137 SUPERFAMILY SSF57716 93 131 6.27E-9 T 11-10-2018 AM1126 249efee9f1ead48af167d14e46e57ea4 137 SUPERFAMILY SSF109635 6 91 1.44E-23 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily AM827 71525757c1fd55b212c69d8fee14a169 662 Pfam PF00270 DEAD/DEAH box helicase 154 302 9.0E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM827 71525757c1fd55b212c69d8fee14a169 662 Gene3D G3DSA:3.40.50.300 123 317 2.1E-59 T 11-10-2018 AM827 71525757c1fd55b212c69d8fee14a169 662 SUPERFAMILY SSF52540 149 537 3.68E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM827 71525757c1fd55b212c69d8fee14a169 662 SMART SM00490 432 527 2.7E-12 T 11-10-2018 IPR001650 Helicase, C-terminal AM827 71525757c1fd55b212c69d8fee14a169 662 SMART SM00487 130 330 3.6E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM827 71525757c1fd55b212c69d8fee14a169 662 TIGRFAM TIGR00595 priA: primosomal protein N' 157 659 1.8E-173 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM827 71525757c1fd55b212c69d8fee14a169 662 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 661 22.025 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AM827 71525757c1fd55b212c69d8fee14a169 662 Gene3D G3DSA:1.10.8.630 5 110 1.2E-23 T 11-10-2018 AM827 71525757c1fd55b212c69d8fee14a169 662 Pfam PF00271 Helicase conserved C-terminal domain 442 526 3.7E-8 T 11-10-2018 IPR001650 Helicase, C-terminal AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Pfam PF01411 tRNA synthetases class II (A) 9 567 3.2E-196 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Gene3D G3DSA:3.10.310.40 777 877 1.9E-6 T 11-10-2018 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 880 152.743 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 856 2.3E-247 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Gene3D G3DSA:3.30.54.20 636 689 7.0E-44 T 11-10-2018 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 SUPERFAMILY SSF101353 249 451 2.09E-49 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 78 89 4.9E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 4.9E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 202 213 4.9E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 4.9E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 4.9E-29 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 SUPERFAMILY SSF50447 458 564 4.24E-15 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 SUPERFAMILY SSF55186 564 717 8.11E-46 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Gene3D G3DSA:3.30.930.10 4 245 5.3E-104 T 11-10-2018 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 SMART SM00863 666 708 2.5E-22 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 SUPERFAMILY SSF55681 6 248 5.72E-101 T 11-10-2018 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 666 708 1.3E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Gene3D G3DSA:3.30.980.10 575 709 7.0E-44 T 11-10-2018 AM224 bcbc0e869e4b73bbf11e3541e80a8ff5 882 Gene3D G3DSA:2.40.30.130 465 564 4.6E-7 T 11-10-2018 AM407 ca6fdf172157e458b37e05f669f17abc 301 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM407 ca6fdf172157e458b37e05f669f17abc 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 9.2E-93 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM407 ca6fdf172157e458b37e05f669f17abc 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 9.3E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 9.3E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 9.3E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 9.3E-29 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 58.148 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 AM407 ca6fdf172157e458b37e05f669f17abc 301 SUPERFAMILY SSF51569 1 289 1.03E-92 T 11-10-2018 AM407 ca6fdf172157e458b37e05f669f17abc 301 SMART SM01130 2 289 1.8E-122 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 PIRSF PIRSF001365 1 299 7.9E-90 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 Gene3D G3DSA:3.20.20.70 1 290 1.7E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM407 ca6fdf172157e458b37e05f669f17abc 301 Pfam PF00701 Dihydrodipicolinate synthetase family 3 286 1.3E-79 T 11-10-2018 IPR002220 DapA-like GO:0016829 AM407 ca6fdf172157e458b37e05f669f17abc 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 Gene3D G3DSA:1.10.240.10 184 295 1.4E-125 T 11-10-2018 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 327 2.8E-93 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 Pfam PF00579 tRNA synthetases class I (W and Y) 2 275 7.7E-74 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 328 36.771 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 SUPERFAMILY SSF52374 2 327 1.04E-85 T 11-10-2018 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 Gene3D G3DSA:3.40.50.620 2 326 1.4E-125 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM012 99116e62fa28ccd030ca53bb4067f4c4 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 5.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 193 203 5.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 5.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM012 99116e62fa28ccd030ca53bb4067f4c4 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 5.2E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 AM231 fded509d6b1320b99750a744e48e3395 388 Gene3D G3DSA:3.30.1490.20 21 104 7.0E-82 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM231 fded509d6b1320b99750a744e48e3395 388 SUPERFAMILY SSF52210 242 385 2.22E-50 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM231 fded509d6b1320b99750a744e48e3395 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 40.819 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM231 fded509d6b1320b99750a744e48e3395 388 Pfam PF08442 ATP-grasp domain 2 202 4.0E-68 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM231 fded509d6b1320b99750a744e48e3395 388 Gene3D G3DSA:3.30.470.20 2 234 7.0E-82 T 11-10-2018 AM231 fded509d6b1320b99750a744e48e3395 388 Gene3D G3DSA:3.40.50.261 240 386 2.1E-53 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM231 fded509d6b1320b99750a744e48e3395 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 384 1.2E-147 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM231 fded509d6b1320b99750a744e48e3395 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM231 fded509d6b1320b99750a744e48e3395 388 SUPERFAMILY SSF56059 2 236 9.56E-69 T 11-10-2018 AM231 fded509d6b1320b99750a744e48e3395 388 Pfam PF00549 CoA-ligase 262 378 4.4E-19 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 AM231 fded509d6b1320b99750a744e48e3395 388 PIRSF PIRSF001554 1 387 1.6E-138 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 AM419 f693f55fa2b3d62a78403325e2188ad9 946 Pfam PF12705 PD-(D/E)XK nuclease superfamily 692 920 3.3E-6 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type AM745 297dd9743da1dfbbfc2903b928ed093c 487 Pfam PF00361 Proton-conducting membrane transporter 122 412 1.1E-62 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM745 297dd9743da1dfbbfc2903b928ed093c 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 370 396 6.3E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM745 297dd9743da1dfbbfc2903b928ed093c 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 126 145 6.3E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM745 297dd9743da1dfbbfc2903b928ed093c 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 230 254 6.3E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM745 297dd9743da1dfbbfc2903b928ed093c 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 318 337 6.3E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM745 297dd9743da1dfbbfc2903b928ed093c 487 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 156 180 6.3E-40 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM745 297dd9743da1dfbbfc2903b928ed093c 487 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 4 476 1.3E-133 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM1271 250361f34f3b14754480bf530f5571a7 134 SUPERFAMILY SSF50104 5 119 2.91E-36 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM1271 250361f34f3b14754480bf530f5571a7 134 PIRSF PIRSF002191 1 134 8.8E-41 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1271 250361f34f3b14754480bf530f5571a7 134 Gene3D G3DSA:2.30.30.790 4 116 2.0E-13 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1271 250361f34f3b14754480bf530f5571a7 134 Pfam PF01245 Ribosomal protein L19 5 116 5.3E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1271 250361f34f3b14754480bf530f5571a7 134 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 18 116 5.1E-36 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1271 250361f34f3b14754480bf530f5571a7 134 PRINTS PR00061 Ribosomal protein L19 signature 8 37 3.9E-27 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1271 250361f34f3b14754480bf530f5571a7 134 PRINTS PR00061 Ribosomal protein L19 signature 92 117 3.9E-27 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1271 250361f34f3b14754480bf530f5571a7 134 PRINTS PR00061 Ribosomal protein L19 signature 38 67 3.9E-27 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM511 106f7db747c8c2499406a79a7e04183d 207 Gene3D G3DSA:3.40.30.10 6 200 6.5E-67 T 11-10-2018 AM511 106f7db747c8c2499406a79a7e04183d 207 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 163 197 8.0E-10 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM511 106f7db747c8c2499406a79a7e04183d 207 Pfam PF00578 AhpC/TSA family 10 142 2.4E-29 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM511 106f7db747c8c2499406a79a7e04183d 207 SUPERFAMILY SSF52833 6 200 2.06E-57 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM511 106f7db747c8c2499406a79a7e04183d 207 PIRSF PIRSF000239 2 204 5.8E-57 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM909 529545b387bf20f03d1ab100ca2d8658 277 Gene3D G3DSA:4.10.950.10 196 276 5.0E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM909 529545b387bf20f03d1ab100ca2d8658 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM909 529545b387bf20f03d1ab100ca2d8658 277 PIRSF PIRSF002158 5 276 8.0E-101 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM909 529545b387bf20f03d1ab100ca2d8658 277 SUPERFAMILY SSF50249 3 123 2.81E-42 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM909 529545b387bf20f03d1ab100ca2d8658 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 4.3E-54 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM909 529545b387bf20f03d1ab100ca2d8658 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 277 44.668 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM909 529545b387bf20f03d1ab100ca2d8658 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 269 1.3E-115 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AM909 529545b387bf20f03d1ab100ca2d8658 277 SMART SM01382 124 252 5.4E-85 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AM909 529545b387bf20f03d1ab100ca2d8658 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.3E-28 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM909 529545b387bf20f03d1ab100ca2d8658 277 SUPERFAMILY SSF50104 126 270 5.78E-59 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM909 529545b387bf20f03d1ab100ca2d8658 277 Gene3D G3DSA:2.30.30.30 115 195 2.3E-27 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM909 529545b387bf20f03d1ab100ca2d8658 277 SMART SM01383 42 118 5.4E-43 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM909 529545b387bf20f03d1ab100ca2d8658 277 Gene3D G3DSA:2.40.50.140 1 114 3.9E-41 T 11-10-2018 AM1266 c16b3335f5539ef6d372b60a12d72dcf 271 Gene3D G3DSA:3.40.50.300 2 263 3.7E-74 T 11-10-2018 AM1266 c16b3335f5539ef6d372b60a12d72dcf 271 SUPERFAMILY SSF52540 3 255 3.51E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1266 c16b3335f5539ef6d372b60a12d72dcf 271 Pfam PF13614 AAA domain 5 179 1.1E-58 T 11-10-2018 IPR025669 AAA domain AM1119 e080e2fa5d56373713f8162706b7a7dc 610 Pfam PF01434 Peptidase family M41 387 586 4.2E-72 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 SUPERFAMILY SSF140990 408 595 8.37E-69 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 Gene3D G3DSA:1.20.58.760 403 599 1.9E-69 T 11-10-2018 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 601 36.222 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 Gene3D G3DSA:3.40.50.300 142 328 5.4E-69 T 11-10-2018 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 325 9.3E-45 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 588 1.4E-223 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 AM1119 e080e2fa5d56373713f8162706b7a7dc 610 SMART SM00382 190 329 4.0E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain AM1119 e080e2fa5d56373713f8162706b7a7dc 610 SUPERFAMILY SSF52540 152 397 4.17E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1119 e080e2fa5d56373713f8162706b7a7dc 610 Gene3D G3DSA:1.10.8.60 329 402 6.6E-30 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 SUPERFAMILY SSF51905 1 334 4.54E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.7E-37 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 1.7E-37 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 1.7E-37 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 1.7E-37 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 277 1.7E-37 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 1.4E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM215 6a94a906f05856a808ba346fa7b84c78 470 Gene3D G3DSA:3.50.50.60 148 268 2.0E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 5.1E-66 T 11-10-2018 AM215 6a94a906f05856a808ba346fa7b84c78 470 PIRSF PIRSF000350 1 464 2.2E-79 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM215 6a94a906f05856a808ba346fa7b84c78 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 7.2E-65 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM215 6a94a906f05856a808ba346fa7b84c78 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM215 6a94a906f05856a808ba346fa7b84c78 470 SUPERFAMILY SSF55424 349 467 1.27E-36 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM215 6a94a906f05856a808ba346fa7b84c78 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 468 1.4E-153 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM215 6a94a906f05856a808ba346fa7b84c78 470 Gene3D G3DSA:3.50.50.60 5 325 2.0E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM215 6a94a906f05856a808ba346fa7b84c78 470 Gene3D G3DSA:3.30.390.30 351 470 6.2E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 241 381 6.7E-59 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 15 111 6.2E-33 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 239 8.5E-28 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 SUPERFAMILY SSF55973 14 120 1.06E-33 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 125 135 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 Gene3D G3DSA:3.30.300.10 16 241 1.6E-141 T 11-10-2018 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 267 275 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 Gene3D G3DSA:3.30.300.10 112 383 1.6E-141 T 11-10-2018 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 Gene3D G3DSA:3.30.300.10 21 278 1.6E-141 T 11-10-2018 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 16 388 3.5E-133 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 SUPERFAMILY SSF55973 121 240 7.85E-36 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 SUPERFAMILY SSF55973 241 390 9.42E-60 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM1288 d9d447b9c8d75039a1575ccf5fa1fb5e 400 PIRSF PIRSF000497 8 392 2.7E-141 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 AM528 321306f364badba160a2a1c5e8f96a91 599 Pfam PF03144 Elongation factor Tu domain 2 208 278 9.8E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 177 6.6E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 Gene3D G3DSA:2.40.30.10 189 287 1.3E-31 T 11-10-2018 AM528 321306f364badba160a2a1c5e8f96a91 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AM528 321306f364badba160a2a1c5e8f96a91 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 599 275.634 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 Gene3D G3DSA:3.30.70.3380 371 480 2.3E-37 T 11-10-2018 AM528 321306f364badba160a2a1c5e8f96a91 599 Pfam PF06421 GTP-binding protein LepA C-terminus 490 596 2.9E-48 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal AM528 321306f364badba160a2a1c5e8f96a91 599 SUPERFAMILY SSF54980 296 373 1.62E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like AM528 321306f364badba160a2a1c5e8f96a91 599 SUPERFAMILY SSF54980 402 496 1.06E-22 T 11-10-2018 IPR035647 EF-G domain III/V-like AM528 321306f364badba160a2a1c5e8f96a91 599 SUPERFAMILY SSF52540 5 235 3.64E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM528 321306f364badba160a2a1c5e8f96a91 599 Gene3D G3DSA:3.30.70.870 289 370 1.4E-33 T 11-10-2018 AM528 321306f364badba160a2a1c5e8f96a91 599 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 4.7E-49 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 Pfam PF14492 Elongation Factor G, domain II 296 368 2.8E-6 T 11-10-2018 AM528 321306f364badba160a2a1c5e8f96a91 599 Gene3D G3DSA:3.40.50.300 4 188 5.7E-68 T 11-10-2018 AM528 321306f364badba160a2a1c5e8f96a91 599 TIGRFAM TIGR01393 lepA: elongation factor 4 6 597 1.2E-275 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 Pfam PF00679 Elongation factor G C-terminus 403 486 1.7E-18 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AM528 321306f364badba160a2a1c5e8f96a91 599 Gene3D G3DSA:3.30.70.2570 482 556 4.4E-33 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily AM528 321306f364badba160a2a1c5e8f96a91 599 SMART SM00838 404 487 0.0031 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AM528 321306f364badba160a2a1c5e8f96a91 599 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 PRINTS PR00315 GTP-binding elongation factor signature 77 87 8.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 PRINTS PR00315 GTP-binding elongation factor signature 93 104 8.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 PRINTS PR00315 GTP-binding elongation factor signature 52 60 8.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM528 321306f364badba160a2a1c5e8f96a91 599 PRINTS PR00315 GTP-binding elongation factor signature 9 22 8.3E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM795 2913a070977f4bae9926687d7ff5c651 111 Pfam PF01176 Translation initiation factor 1A / IF-1 39 105 6.2E-15 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AM795 2913a070977f4bae9926687d7ff5c651 111 Gene3D G3DSA:2.40.50.140 32 107 8.2E-23 T 11-10-2018 AM795 2913a070977f4bae9926687d7ff5c651 111 SUPERFAMILY SSF50249 22 110 3.18E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM795 2913a070977f4bae9926687d7ff5c651 111 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 33 105 1.6E-19 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AM1117 1812f19bd4b17388f5d2cfbb2b80b547 501 Pfam PF01171 PP-loop family 72 251 3.6E-56 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 AM1117 1812f19bd4b17388f5d2cfbb2b80b547 501 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 72 253 1.3E-54 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM1117 1812f19bd4b17388f5d2cfbb2b80b547 501 SUPERFAMILY SSF52402 64 259 9.04E-50 T 11-10-2018 AM1117 1812f19bd4b17388f5d2cfbb2b80b547 501 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 53 400 21.007 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AM1117 1812f19bd4b17388f5d2cfbb2b80b547 501 Gene3D G3DSA:3.40.50.620 59 281 2.0E-62 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1172 76ff12955b3dc5bd313f573cfe2bc8b2 210 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 16 206 1.8E-70 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM1172 76ff12955b3dc5bd313f573cfe2bc8b2 210 Gene3D G3DSA:3.90.870.10 5 210 7.5E-75 T 11-10-2018 AM1172 76ff12955b3dc5bd313f573cfe2bc8b2 210 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 11 206 2.0E-62 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 AM1172 76ff12955b3dc5bd313f573cfe2bc8b2 210 SUPERFAMILY SSF55821 10 208 1.65E-74 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily AM767 da0dbda5a3582f503903ffef48cd6ca6 359 Pfam PF00472 RF-1 domain 212 321 1.0E-39 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 SMART SM00937 64 179 6.3E-51 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 Gene3D G3DSA:3.30.70.1660 113 343 3.4E-93 T 11-10-2018 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 Gene3D G3DSA:3.30.160.20 211 297 3.4E-93 T 11-10-2018 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 37.678 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 358 5.4E-148 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 Pfam PF03462 PCRF domain 12 204 3.3E-61 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 SUPERFAMILY SSF75620 11 354 4.84E-123 T 11-10-2018 AM767 da0dbda5a3582f503903ffef48cd6ca6 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM818 5ca02a473efac29c53b621f8650635be 461 Gene3D G3DSA:1.10.3720.10 234 458 4.3E-29 T 11-10-2018 IPR035906 MetI-like superfamily AM818 5ca02a473efac29c53b621f8650635be 461 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 257 456 6.1E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM818 5ca02a473efac29c53b621f8650635be 461 SUPERFAMILY SSF161098 223 445 4.06E-30 T 11-10-2018 IPR035906 MetI-like superfamily AM818 5ca02a473efac29c53b621f8650635be 461 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 219 456 2.0E-59 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 AM818 5ca02a473efac29c53b621f8650635be 461 Pfam PF11812 Domain of unknown function (DUF3333) 67 191 3.5E-11 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 Gene3D G3DSA:3.40.50.300 35 276 1.6E-81 T 11-10-2018 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 PRINTS PR00142 RecA protein signature 102 131 4.1E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 PRINTS PR00142 RecA protein signature 252 281 4.1E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 PRINTS PR00142 RecA protein signature 219 247 4.1E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 PRINTS PR00142 RecA protein signature 306 323 4.1E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 PRINTS PR00142 RecA protein signature 136 165 4.1E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 PRINTS PR00142 RecA protein signature 174 203 4.1E-85 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 Pfam PF00154 recA bacterial DNA recombination protein 16 277 4.6E-137 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 ProSitePatterns PS00321 recA signature. 222 230 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 Hamap MF_00268 Protein RecA [recA]. 14 338 49.834 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 SMART SM00382 66 237 2.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 SUPERFAMILY SSF54752 277 333 3.14E-19 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 13 332 8.5E-165 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 SUPERFAMILY SSF52540 12 276 2.84E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM085 4ecb5ecfefd1445b4090471f0fdaa459 359 Gene3D G3DSA:3.30.250.10 277 349 3.8E-23 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 1.3E-31 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 SMART SM00846 2 153 1.0E-65 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 8.6E-111 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 PIRSF PIRSF000149 1 334 2.2E-126 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 SUPERFAMILY SSF55347 153 314 3.43E-56 T 11-10-2018 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 313 1.9E-48 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 Gene3D G3DSA:3.30.360.10 152 315 1.8E-122 T 11-10-2018 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 7.0E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 7.0E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 7.0E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 7.0E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.0E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 Gene3D G3DSA:3.40.50.720 3 325 1.8E-122 T 11-10-2018 AM1283 c1eddfdec8d2fc43c99c93f74e7c6073 334 SUPERFAMILY SSF51735 3 169 3.16E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 8 72 3.6E-22 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 SUPERFAMILY SSF55200 84 166 7.72E-27 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 Gene3D G3DSA:3.10.20.80 3 78 3.2E-23 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 SUPERFAMILY SSF54364 5 73 1.44E-21 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 83 165 9.0E-29 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 Gene3D G3DSA:3.30.110.10 79 173 3.8E-28 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AM1274 34d48b61a414c022ab294a9a0cb9ebfd 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 8 166 2.5E-44 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 AM573 8774707926e455220692646081a1dbb9 68 Gene3D G3DSA:3.40.190.10 1 68 5.6E-15 T 11-10-2018 AM573 8774707926e455220692646081a1dbb9 68 SUPERFAMILY SSF53850 3 67 2.93E-10 T 11-10-2018 AM573 8774707926e455220692646081a1dbb9 68 Pfam PF16868 NMT1-like family 4 65 4.9E-13 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM044 450593dcab0a117e6abcdcb3655e858a 132 Pfam PF04956 TrbC/VIRB2 family 8 104 1.5E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM010 b679a9a6829c2dc8d70cc6e6749eda0b 207 SUPERFAMILY SSF51984 21 101 1.57E-25 T 11-10-2018 AM010 b679a9a6829c2dc8d70cc6e6749eda0b 207 Pfam PF01225 Mur ligase family, catalytic domain 21 115 4.1E-19 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM010 b679a9a6829c2dc8d70cc6e6749eda0b 207 SUPERFAMILY SSF53623 105 192 1.96E-25 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM010 b679a9a6829c2dc8d70cc6e6749eda0b 207 Gene3D G3DSA:3.40.50.720 20 104 1.4E-27 T 11-10-2018 AM010 b679a9a6829c2dc8d70cc6e6749eda0b 207 Gene3D G3DSA:3.40.1190.10 107 197 7.0E-26 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM166 cee61e6c422f8c57ca6187b412948c2e 113 SMART SM01219 8 109 3.9E-19 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM166 cee61e6c422f8c57ca6187b412948c2e 113 SUPERFAMILY SSF55387 16 109 1.69E-20 T 11-10-2018 AM166 cee61e6c422f8c57ca6187b412948c2e 113 Pfam PF01491 Frataxin-like domain 15 109 1.4E-14 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM166 cee61e6c422f8c57ca6187b412948c2e 113 Gene3D G3DSA:3.30.920.10 10 112 2.1E-14 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 AM1023 b606050cf5dc2f5b7209732bd1e2c966 170 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 27 154 24.671 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM1023 b606050cf5dc2f5b7209732bd1e2c966 170 Pfam PF00572 Ribosomal protein L13 26 150 1.3E-48 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM1023 b606050cf5dc2f5b7209732bd1e2c966 170 Gene3D G3DSA:3.90.1180.10 14 155 3.3E-51 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AM1023 b606050cf5dc2f5b7209732bd1e2c966 170 SUPERFAMILY SSF52161 17 155 3.27E-50 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 AM1023 b606050cf5dc2f5b7209732bd1e2c966 170 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 19 154 1.9E-51 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1023 b606050cf5dc2f5b7209732bd1e2c966 170 PIRSF PIRSF002181 14 168 1.7E-44 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AM574 ffbe3c8262449abfe968a5b4dafe033b 225 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 82 205 1.2E-14 T 11-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit AM574 ffbe3c8262449abfe968a5b4dafe033b 225 Pfam PF17289 Terminase RNaseH-like domain 69 206 8.6E-11 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like AM983 42e024b9604a1c803688fe1f1b567904 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 351 41.863 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM983 42e024b9604a1c803688fe1f1b567904 351 SUPERFAMILY SSF55326 7 175 5.68E-45 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM983 42e024b9604a1c803688fe1f1b567904 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 170 8.9E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AM983 42e024b9604a1c803688fe1f1b567904 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 184 349 2.6E-32 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AM983 42e024b9604a1c803688fe1f1b567904 351 Gene3D G3DSA:3.30.1330.10 7 176 1.6E-60 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM983 42e024b9604a1c803688fe1f1b567904 351 Gene3D G3DSA:3.90.650.10 177 350 9.5E-68 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM983 42e024b9604a1c803688fe1f1b567904 351 SUPERFAMILY SSF56042 180 349 6.43E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM983 42e024b9604a1c803688fe1f1b567904 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 9 342 4.2E-121 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM886 2b85f96bfc34d9685197526755577a0d 134 Gene3D G3DSA:3.90.1030.10 3 128 1.1E-38 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM886 2b85f96bfc34d9685197526755577a0d 134 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM886 2b85f96bfc34d9685197526755577a0d 134 Pfam PF01196 Ribosomal protein L17 20 121 9.7E-28 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM886 2b85f96bfc34d9685197526755577a0d 134 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 121 23.323 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM886 2b85f96bfc34d9685197526755577a0d 134 SUPERFAMILY SSF64263 1 123 2.09E-39 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM886 2b85f96bfc34d9685197526755577a0d 134 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 122 3.9E-32 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 635 32.477 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 SUPERFAMILY SSF55681 244 527 1.65E-98 T 11-10-2018 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Gene3D G3DSA:3.30.930.10 224 532 1.2E-124 T 11-10-2018 AM1273 d5f79355f7840a5a562701827c2c43ba 636 SUPERFAMILY SSF55186 66 242 9.68E-61 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 AM1273 d5f79355f7840a5a562701827c2c43ba 636 SUPERFAMILY SSF52954 528 632 6.8E-20 T 11-10-2018 AM1273 d5f79355f7840a5a562701827c2c43ba 636 SUPERFAMILY SSF81271 5 63 1.93E-5 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 8.3E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Gene3D G3DSA:3.10.20.30 1 63 2.0E-7 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AM1273 d5f79355f7840a5a562701827c2c43ba 636 Gene3D G3DSA:3.30.54.20 132 188 1.2E-63 T 11-10-2018 AM1273 d5f79355f7840a5a562701827c2c43ba 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 5.2E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 5.2E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 5.2E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 5.2E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 5.2E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Pfam PF03129 Anticodon binding domain 545 629 6.8E-12 T 11-10-2018 IPR004154 Anticodon-binding AM1273 d5f79355f7840a5a562701827c2c43ba 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 628 5.4E-211 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Gene3D G3DSA:3.40.50.800 533 635 2.7E-18 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AM1273 d5f79355f7840a5a562701827c2c43ba 636 SMART SM00863 171 220 9.3E-23 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 530 3.6E-44 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1273 d5f79355f7840a5a562701827c2c43ba 636 Gene3D G3DSA:3.30.980.10 71 223 1.2E-63 T 11-10-2018 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 16 259 16.691 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 21 48 2.7E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 118 2.7E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 118 144 2.7E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 175 203 2.7E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 23 247 3.2E-62 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 Pfam PF00902 Sec-independent protein translocase protein (TatC) 25 242 7.6E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AM740 cacdaedec346c9fc3390a1c5fdbe7a97 260 ProSitePatterns PS01218 TatC family signature. 175 194 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site AM812 9e8577e63eec42a2d13491a7d2136b13 1019 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 651 846 5.7E-18 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM801 9795fe9fc89c69be470f5487eb01bf26 438 Hamap MF_00195 GTPase Der [der]. 1 432 32.28 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 Gene3D G3DSA:3.40.50.300 168 348 2.6E-42 T 11-10-2018 AM801 9795fe9fc89c69be470f5487eb01bf26 438 SUPERFAMILY SSF52540 3 164 1.09E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM801 9795fe9fc89c69be470f5487eb01bf26 438 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 350 429 2.2E-24 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like AM801 9795fe9fc89c69be470f5487eb01bf26 438 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 429 2.4E-148 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 172 305 1.3E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 155 3.5E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 Pfam PF01926 50S ribosome-binding GTPase 3 118 1.3E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 Pfam PF01926 50S ribosome-binding GTPase 176 293 1.0E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 Gene3D G3DSA:3.40.50.300 1 159 9.9E-37 T 11-10-2018 AM801 9795fe9fc89c69be470f5487eb01bf26 438 PIRSF PIRSF006485 1 437 1.0E-156 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 Gene3D G3DSA:3.30.300.20 350 431 3.9E-22 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AM801 9795fe9fc89c69be470f5487eb01bf26 438 SUPERFAMILY SSF52540 167 435 6.32E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM801 9795fe9fc89c69be470f5487eb01bf26 438 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 6.8E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM801 9795fe9fc89c69be470f5487eb01bf26 438 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 6.8E-7 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM947 e8de16e374ed2236717f294998ee8f9c 243 Pfam PF00106 short chain dehydrogenase 8 202 7.2E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM947 e8de16e374ed2236717f294998ee8f9c 243 Gene3D G3DSA:3.40.50.720 1 241 6.7E-63 T 11-10-2018 AM947 e8de16e374ed2236717f294998ee8f9c 243 SUPERFAMILY SSF51735 3 238 1.72E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM947 e8de16e374ed2236717f294998ee8f9c 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM947 e8de16e374ed2236717f294998ee8f9c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 4.2E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM947 e8de16e374ed2236717f294998ee8f9c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.2E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM947 e8de16e374ed2236717f294998ee8f9c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.2E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM947 e8de16e374ed2236717f294998ee8f9c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.2E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM947 e8de16e374ed2236717f294998ee8f9c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 4.2E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM947 e8de16e374ed2236717f294998ee8f9c 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.2E-19 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM698 3d15a1358a958a325c9041b87fd872a7 489 Pfam PF01425 Amidase 26 467 6.7E-135 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM698 3d15a1358a958a325c9041b87fd872a7 489 ProSitePatterns PS00571 Amidases signature. 156 187 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 AM698 3d15a1358a958a325c9041b87fd872a7 489 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 13 480 83.63 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM698 3d15a1358a958a325c9041b87fd872a7 489 SUPERFAMILY SSF75304 4 482 3.79E-144 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM698 3d15a1358a958a325c9041b87fd872a7 489 Gene3D G3DSA:3.90.1300.10 5 481 6.4E-167 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM698 3d15a1358a958a325c9041b87fd872a7 489 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 16 476 3.0E-160 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AM1166 b891c5daa46f254d8e95b4cc20b71610 372 SUPERFAMILY SSF56925 109 361 2.25E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1166 b891c5daa46f254d8e95b4cc20b71610 372 Pfam PF01617 Surface antigen 77 372 8.3E-30 T 11-10-2018 IPR002566 Surface antigen msp4 AM094 7b148ccdf5328282a5ab6be53805d525 67 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 67 13.202 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM094 7b148ccdf5328282a5ab6be53805d525 67 PIRSF PIRSF006488 2 67 1.8E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM094 7b148ccdf5328282a5ab6be53805d525 67 Pfam PF02609 Exonuclease VII small subunit 9 59 4.2E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM094 7b148ccdf5328282a5ab6be53805d525 67 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 63 5.1E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM094 7b148ccdf5328282a5ab6be53805d525 67 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 26 47 2.0E-6 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AM094 7b148ccdf5328282a5ab6be53805d525 67 Gene3D G3DSA:1.10.287.1040 5 67 6.4E-17 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 AM094 7b148ccdf5328282a5ab6be53805d525 67 SUPERFAMILY SSF116842 8 65 2.62E-17 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PIRSF PIRSF000350 2 450 1.9E-69 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 AM797 08d87547d7f9a34db9cc3184000388ae 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 468 1.2E-140 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM797 08d87547d7f9a34db9cc3184000388ae 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AM797 08d87547d7f9a34db9cc3184000388ae 471 SUPERFAMILY SSF51905 4 345 2.99E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 288 9.7E-40 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 9.7E-40 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 9.7E-40 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 300 322 9.7E-40 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 9.7E-40 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 335 1.7E-59 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 287 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 315 322 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-70 T 11-10-2018 AM797 08d87547d7f9a34db9cc3184000388ae 471 Gene3D G3DSA:3.50.50.60 156 279 1.1E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM797 08d87547d7f9a34db9cc3184000388ae 471 Gene3D G3DSA:3.50.50.60 7 335 1.1E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM797 08d87547d7f9a34db9cc3184000388ae 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 4.0E-30 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AM797 08d87547d7f9a34db9cc3184000388ae 471 Gene3D G3DSA:3.30.390.30 353 470 4.4E-36 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM797 08d87547d7f9a34db9cc3184000388ae 471 SUPERFAMILY SSF55424 350 466 1.89E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 AM438 7e948dc57504e5eb98aa1c97adbe20cf 238 Pfam PF01121 Dephospho-CoA kinase 18 189 2.6E-27 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM438 7e948dc57504e5eb98aa1c97adbe20cf 238 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 19 189 9.3E-28 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM438 7e948dc57504e5eb98aa1c97adbe20cf 238 Gene3D G3DSA:3.40.50.300 10 218 4.7E-41 T 11-10-2018 AM438 7e948dc57504e5eb98aa1c97adbe20cf 238 SUPERFAMILY SSF52540 16 208 4.71E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM438 7e948dc57504e5eb98aa1c97adbe20cf 238 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 16 211 20.674 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 AM793 635aa2626c19bed32cf9f14d80a643cf 196 Hamap MF_00528 Septum formation protein Maf [maf]. 6 193 26.253 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AM793 635aa2626c19bed32cf9f14d80a643cf 196 PIRSF PIRSF006305 1 193 6.8E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AM793 635aa2626c19bed32cf9f14d80a643cf 196 Pfam PF02545 Maf-like protein 7 186 4.0E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AM793 635aa2626c19bed32cf9f14d80a643cf 196 Gene3D G3DSA:3.90.950.10 4 189 2.4E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM793 635aa2626c19bed32cf9f14d80a643cf 196 SUPERFAMILY SSF52972 6 186 1.57E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like AM793 635aa2626c19bed32cf9f14d80a643cf 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 7 186 1.1E-38 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 AM980 d721843eebcbeccd8f291e2cec2898a6 122 Pfam PF02410 Ribosomal silencing factor during starvation 16 109 5.7E-26 T 11-10-2018 AM980 d721843eebcbeccd8f291e2cec2898a6 122 Gene3D G3DSA:3.30.460.10 10 120 6.2E-33 T 11-10-2018 AM980 d721843eebcbeccd8f291e2cec2898a6 122 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 10 110 21.158 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM980 d721843eebcbeccd8f291e2cec2898a6 122 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 14 109 6.1E-31 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AM980 d721843eebcbeccd8f291e2cec2898a6 122 SUPERFAMILY SSF81301 10 115 2.45E-31 T 11-10-2018 AM919 7c85c191677b57c78a88d9d8fe4fa14a 165 Pfam PF13747 Domain of unknown function (DUF4164) 73 161 3.4E-23 T 11-10-2018 IPR025310 Protein of unknown function DUF4164 AM759 17cb2fc99617586ea48640cb0191709b 437 Gene3D G3DSA:1.10.287.40 9 111 5.9E-15 T 11-10-2018 AM759 17cb2fc99617586ea48640cb0191709b 437 Hamap MF_00176 Serine--tRNA ligase [serS]. 9 429 37.21 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 SUPERFAMILY SSF46589 10 119 1.52E-18 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AM759 17cb2fc99617586ea48640cb0191709b 437 TIGRFAM TIGR00414 serS: serine--tRNA ligase 11 424 1.5E-143 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 10 114 1.2E-15 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 AM759 17cb2fc99617586ea48640cb0191709b 437 PRINTS PR00981 Seryl-tRNA synthetase signature 269 281 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 PRINTS PR00981 Seryl-tRNA synthetase signature 321 334 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 PRINTS PR00981 Seryl-tRNA synthetase signature 356 372 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 PRINTS PR00981 Seryl-tRNA synthetase signature 338 354 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 PRINTS PR00981 Seryl-tRNA synthetase signature 281 294 1.1E-29 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 SUPERFAMILY SSF55681 123 429 3.8E-88 T 11-10-2018 AM759 17cb2fc99617586ea48640cb0191709b 437 Gene3D G3DSA:3.30.930.10 112 435 3.6E-111 T 11-10-2018 AM759 17cb2fc99617586ea48640cb0191709b 437 PIRSF PIRSF001529 9 433 4.1E-150 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 AM759 17cb2fc99617586ea48640cb0191709b 437 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 407 8.3E-31 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM430 526c7c60ce65196170f639e6f02e8d8d 471 SUPERFAMILY SSF48295 367 470 4.71E-36 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM430 526c7c60ce65196170f639e6f02e8d8d 471 ProSitePatterns PS01008 DnaA protein signature. 430 449 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM430 526c7c60ce65196170f639e6f02e8d8d 471 Pfam PF11638 DnaA N-terminal domain 24 85 3.2E-16 T 11-10-2018 IPR024633 DnaA N-terminal domain AM430 526c7c60ce65196170f639e6f02e8d8d 471 Gene3D G3DSA:3.40.50.300 127 300 1.5E-49 T 11-10-2018 AM430 526c7c60ce65196170f639e6f02e8d8d 471 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 383 449 3.9E-28 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM430 526c7c60ce65196170f639e6f02e8d8d 471 SMART SM00382 169 297 5.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain AM430 526c7c60ce65196170f639e6f02e8d8d 471 Pfam PF00308 Bacterial dnaA protein 135 353 2.9E-87 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AM430 526c7c60ce65196170f639e6f02e8d8d 471 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 23 471 31.4 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM430 526c7c60ce65196170f639e6f02e8d8d 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 268 295 3.7E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM430 526c7c60ce65196170f639e6f02e8d8d 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 170 190 3.7E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM430 526c7c60ce65196170f639e6f02e8d8d 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 430 449 3.7E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM430 526c7c60ce65196170f639e6f02e8d8d 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 234 248 3.7E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM430 526c7c60ce65196170f639e6f02e8d8d 471 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 202 216 3.7E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like AM430 526c7c60ce65196170f639e6f02e8d8d 471 SMART SM00760 380 449 1.2E-38 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AM430 526c7c60ce65196170f639e6f02e8d8d 471 SUPERFAMILY SSF52540 134 349 1.38E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM430 526c7c60ce65196170f639e6f02e8d8d 471 Gene3D G3DSA:3.30.300.180 24 117 5.5E-8 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily AM430 526c7c60ce65196170f639e6f02e8d8d 471 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 26 470 1.4E-162 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AM430 526c7c60ce65196170f639e6f02e8d8d 471 Gene3D G3DSA:1.10.8.60 303 374 8.6E-23 T 11-10-2018 AM430 526c7c60ce65196170f639e6f02e8d8d 471 Gene3D G3DSA:1.10.1750.10 379 471 6.6E-32 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 SMART SM00904 178 302 3.2E-48 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 14 300 5.0E-76 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 Gene3D G3DSA:3.40.50.620 4 182 8.8E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 SUPERFAMILY SSF52374 12 170 2.94E-31 T 11-10-2018 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 SUPERFAMILY SSF82114 170 301 8.94E-41 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 PIRSF PIRSF004491 2 303 1.5E-97 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 Pfam PF01687 Riboflavin kinase 179 301 4.7E-35 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 Pfam PF06574 FAD synthetase 10 162 1.5E-43 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 AM1082 9a65df2d4a2050dfdf6bae9a45f47550 303 Gene3D G3DSA:2.40.30.30 183 303 4.1E-38 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 AM1009 ea661db1f386a9706b68b7af6652042a 301 Pfam PF01040 UbiA prenyltransferase family 35 281 2.2E-52 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM1009 ea661db1f386a9706b68b7af6652042a 301 Gene3D G3DSA:1.10.357.140 28 198 3.2E-18 T 11-10-2018 AM1009 ea661db1f386a9706b68b7af6652042a 301 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 19 301 18.682 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM1009 ea661db1f386a9706b68b7af6652042a 301 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AM1009 ea661db1f386a9706b68b7af6652042a 301 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 22 297 1.1E-92 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 Gene3D G3DSA:1.20.1560.10 21 326 3.4E-34 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 Pfam PF00664 ABC transporter transmembrane region 37 293 4.6E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 Gene3D G3DSA:3.40.50.300 338 580 2.9E-63 T 11-10-2018 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 SUPERFAMILY SSF52540 332 569 9.87E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 27 569 8.3E-202 T 11-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 SUPERFAMILY SSF90123 17 331 6.8E-42 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 Pfam PF00005 ABC transporter 361 508 7.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM929 1dd6d63d7f4c1eb6edcd34380219dfd0 800 SMART SM00382 369 571 3.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AM456 c9769aa3053ef60b468152807fe94498 956 ProSitePatterns PS00211 ABC transporters family signature. 840 854 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM456 c9769aa3053ef60b468152807fe94498 956 Gene3D G3DSA:1.10.8.280 298 413 2.7E-211 T 11-10-2018 AM456 c9769aa3053ef60b468152807fe94498 956 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM456 c9769aa3053ef60b468152807fe94498 956 Gene3D G3DSA:3.30.190.20 132 248 2.7E-211 T 11-10-2018 AM456 c9769aa3053ef60b468152807fe94498 956 Gene3D G3DSA:1.20.1580.10 92 504 2.7E-211 T 11-10-2018 AM456 c9769aa3053ef60b468152807fe94498 956 Gene3D G3DSA:3.40.50.300 623 947 1.0E-130 T 11-10-2018 AM456 c9769aa3053ef60b468152807fe94498 956 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 934 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 AM456 c9769aa3053ef60b468152807fe94498 956 Gene3D G3DSA:3.40.50.300 8 606 2.7E-211 T 11-10-2018 AM456 c9769aa3053ef60b468152807fe94498 956 SUPERFAMILY SSF52540 624 923 1.07E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM456 c9769aa3053ef60b468152807fe94498 956 Gene3D G3DSA:1.20.1580.10 703 840 1.0E-130 T 11-10-2018 AM456 c9769aa3053ef60b468152807fe94498 956 SUPERFAMILY SSF52540 6 581 7.91E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 Gene3D G3DSA:2.30.30.30 127 186 4.0E-16 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 SUPERFAMILY SSF50104 132 186 4.39E-12 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 SMART SM00738 9 118 2.1E-27 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 Gene3D G3DSA:3.30.70.940 5 124 2.4E-29 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 9 186 20.572 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 PRINTS PR00338 Transcription termination factor NUSG signature 64 76 4.0E-8 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 PRINTS PR00338 Transcription termination factor NUSG signature 162 178 4.0E-8 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 PRINTS PR00338 Transcription termination factor NUSG signature 144 159 4.0E-8 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 12 186 1.6E-45 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 Pfam PF02357 Transcription termination factor nusG 11 114 1.2E-17 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM256 8e9b5a6fdbac6f3ee8987ddbb79bb35c 188 SUPERFAMILY SSF82679 10 117 7.98E-28 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 AM798 514f5bae1542b9266842751eb9d002e3 389 Pfam PF13360 PQQ-like domain 80 314 2.2E-31 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat AM798 514f5bae1542b9266842751eb9d002e3 389 SUPERFAMILY SSF50998 57 378 6.47E-45 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily AM798 514f5bae1542b9266842751eb9d002e3 389 Gene3D G3DSA:2.130.10.10 52 388 6.9E-49 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 AM798 514f5bae1542b9266842751eb9d002e3 389 SMART SM00564 150 183 200.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM798 514f5bae1542b9266842751eb9d002e3 389 SMART SM00564 329 360 300.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM798 514f5bae1542b9266842751eb9d002e3 389 SMART SM00564 247 278 160.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM798 514f5bae1542b9266842751eb9d002e3 389 SMART SM00564 110 141 9.4 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM798 514f5bae1542b9266842751eb9d002e3 389 SMART SM00564 284 316 16.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM798 514f5bae1542b9266842751eb9d002e3 389 SMART SM00564 66 98 5.3 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SUPERFAMILY SSF50249 473 558 2.19E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Pfam PF00575 S1 RNA binding domain 221 298 1.3E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Pfam PF00575 S1 RNA binding domain 138 203 7.2E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Pfam PF00575 S1 RNA binding domain 50 118 3.3E-5 T 11-10-2018 IPR003029 S1 domain GO:0003676 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Pfam PF00575 S1 RNA binding domain 314 385 4.2E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Pfam PF00575 S1 RNA binding domain 398 477 1.1E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SUPERFAMILY SSF50249 293 405 2.07E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SMART SM00316 51 119 4.0E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SMART SM00316 400 477 3.1E-12 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SMART SM00316 492 559 7.4E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SMART SM00316 135 203 1.3E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SMART SM00316 222 298 5.8E-22 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SMART SM00316 313 385 2.4E-19 T 11-10-2018 IPR022967 RNA-binding domain, S1 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Gene3D G3DSA:2.40.50.140 40 131 5.7E-14 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Gene3D G3DSA:2.40.50.140 132 215 2.7E-6 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SUPERFAMILY SSF50249 48 144 2.26E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SUPERFAMILY SSF50249 121 207 3.13E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SUPERFAMILY SSF50249 221 314 1.79E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 368 386 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 116 135 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 140 156 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 158 175 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 53 71 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 328 347 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 71 85 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 PRINTS PR00681 Ribosomal protein S1 signature 250 271 2.8E-54 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Gene3D G3DSA:2.40.50.140 307 395 2.0E-25 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Gene3D G3DSA:2.40.50.140 396 489 2.3E-18 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 Gene3D G3DSA:2.40.50.140 219 306 2.9E-26 T 11-10-2018 AM917 ecaf760da50c7f9f01514ed7b680a2b3 559 SUPERFAMILY SSF50249 385 482 1.0E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM1012 af1392840fa5f696d148dcecd6eb142e 168 SMART SM01323 62 146 2.4E-39 T 11-10-2018 IPR003849 Preprotein translocase YajC AM1012 af1392840fa5f696d148dcecd6eb142e 168 Pfam PF02699 Preprotein translocase subunit 67 143 4.5E-26 T 11-10-2018 IPR003849 Preprotein translocase YajC AM1012 af1392840fa5f696d148dcecd6eb142e 168 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 67 146 1.5E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC AM1012 af1392840fa5f696d148dcecd6eb142e 168 PRINTS PR01853 Bacterial YajC preprotein translocase signature 102 120 5.9E-15 T 11-10-2018 IPR003849 Preprotein translocase YajC AM1012 af1392840fa5f696d148dcecd6eb142e 168 PRINTS PR01853 Bacterial YajC preprotein translocase signature 64 84 5.9E-15 T 11-10-2018 IPR003849 Preprotein translocase YajC AM237 915e9a429317672c75fd04bd52c5fbce 338 SUPERFAMILY SSF51412 13 332 2.59E-49 T 11-10-2018 AM237 915e9a429317672c75fd04bd52c5fbce 338 Gene3D G3DSA:3.20.20.70 10 337 1.4E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM237 915e9a429317672c75fd04bd52c5fbce 338 Pfam PF03060 Nitronate monooxygenase 83 328 1.7E-30 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 PRINTS PR01703 Manganese superoxide dismutase signature 89 102 9.7E-15 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 PRINTS PR01703 Manganese superoxide dismutase signature 181 193 9.7E-15 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 PRINTS PR01703 Manganese superoxide dismutase signature 142 150 9.7E-15 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 PRINTS PR01703 Manganese superoxide dismutase signature 43 56 9.7E-15 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 Gene3D G3DSA:1.10.287.990 38 105 2.5E-18 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 183 190 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 PIRSF PIRSF000349 5 223 5.2E-76 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 SUPERFAMILY SSF46609 11 106 8.12E-27 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 Gene3D G3DSA:2.40.500.20 110 223 2.0E-39 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 113 216 2.2E-33 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 21 106 6.7E-24 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM816 f13b3730ace99760fe9e4dcd785a4fc3 223 SUPERFAMILY SSF54719 108 220 2.1E-42 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 AM200 58dbc4d70c058328ac4613054951c751 296 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 288 1.8E-54 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM200 58dbc4d70c058328ac4613054951c751 296 Gene3D G3DSA:2.40.50.140 1 110 1.5E-31 T 11-10-2018 AM200 58dbc4d70c058328ac4613054951c751 296 SUPERFAMILY SSF50249 4 109 5.9E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM200 58dbc4d70c058328ac4613054951c751 296 SUPERFAMILY SSF55681 121 288 3.58E-50 T 11-10-2018 AM200 58dbc4d70c058328ac4613054951c751 296 Gene3D G3DSA:3.30.930.10 124 280 5.8E-72 T 11-10-2018 AM200 58dbc4d70c058328ac4613054951c751 296 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 5.1E-9 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM200 58dbc4d70c058328ac4613054951c751 296 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 5.1E-9 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM200 58dbc4d70c058328ac4613054951c751 296 Pfam PF01336 OB-fold nucleic acid binding domain 21 105 4.0E-11 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AM979 480f4764e4f38ef9cc35fc2f185de7b1 426 SUPERFAMILY SSF48452 264 376 2.47E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM979 480f4764e4f38ef9cc35fc2f185de7b1 426 Gene3D G3DSA:1.25.40.10 257 410 5.4E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM979 480f4764e4f38ef9cc35fc2f185de7b1 426 SMART SM00028 292 325 0.0052 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM979 480f4764e4f38ef9cc35fc2f185de7b1 426 Pfam PF01435 Peptidase family M48 33 219 4.0E-26 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AM979 480f4764e4f38ef9cc35fc2f185de7b1 426 SUPERFAMILY SSF55486 62 141 9.29E-10 T 11-10-2018 AM1020 407aedc13d2b6576ea954faa350b31a2 175 Pfam PF00719 Inorganic pyrophosphatase 18 172 2.5E-48 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM1020 407aedc13d2b6576ea954faa350b31a2 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 33.672 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM1020 407aedc13d2b6576ea954faa350b31a2 175 Gene3D G3DSA:3.90.80.10 5 175 1.4E-65 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM1020 407aedc13d2b6576ea954faa350b31a2 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM1020 407aedc13d2b6576ea954faa350b31a2 175 SUPERFAMILY SSF50324 4 171 6.8E-60 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.6E-38 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 Gene3D G3DSA:3.10.20.30 49 361 2.8E-134 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 SUPERFAMILY SSF52540 3 302 7.72E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.3E-131 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 Gene3D G3DSA:1.10.150.300 114 199 2.8E-134 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 4.6E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 Gene3D G3DSA:3.40.50.300 3 279 2.8E-134 T 11-10-2018 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 39.566 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 PIRSF PIRSF006641 1 364 1.7E-145 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 Pfam PF01926 50S ribosome-binding GTPase 5 116 5.9E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1355 b3545f4fba87cc1528c24d9f7a7e85d9 364 SUPERFAMILY SSF81271 280 361 9.81E-35 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 Pfam PF01494 FAD binding domain 5 309 5.9E-17 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 Gene3D G3DSA:3.30.9.50 75 262 9.9E-74 T 11-10-2018 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 273 288 3.1E-11 T 11-10-2018 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 304 3.1E-11 T 11-10-2018 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 3.1E-11 T 11-10-2018 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 SUPERFAMILY SSF51905 5 385 2.67E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 Gene3D G3DSA:3.50.50.60 6 331 9.9E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 287 300 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 AM1289 588b3585e5f47b78dce1e3d82a3028e2 388 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 383 2.3E-95 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 AM942 e24dd07ac5287c0bd192efe25653aa95 230 Pfam PF04002 RadC-like JAB domain 110 228 1.7E-38 T 11-10-2018 IPR025657 RadC-like JAB domain AM942 e24dd07ac5287c0bd192efe25653aa95 230 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 179 184 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site AM942 e24dd07ac5287c0bd192efe25653aa95 230 Gene3D G3DSA:1.10.150.20 50 91 1.8E-6 T 11-10-2018 AM942 e24dd07ac5287c0bd192efe25653aa95 230 SUPERFAMILY SSF47781 51 108 2.89E-6 T 11-10-2018 IPR010994 RuvA domain 2-like AM942 e24dd07ac5287c0bd192efe25653aa95 230 SUPERFAMILY SSF102712 151 204 1.06E-5 T 11-10-2018 AM942 e24dd07ac5287c0bd192efe25653aa95 230 Gene3D G3DSA:3.40.140.10 106 230 2.8E-39 T 11-10-2018 AM942 e24dd07ac5287c0bd192efe25653aa95 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 17 230 5.8E-56 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 AM1136 348b272c7c3bd91f69e0c876c230dc09 419 SUPERFAMILY SSF81301 8 144 1.2E-39 T 11-10-2018 AM1136 348b272c7c3bd91f69e0c876c230dc09 419 Gene3D G3DSA:3.30.460.10 3 144 8.3E-43 T 11-10-2018 AM1136 348b272c7c3bd91f69e0c876c230dc09 419 Gene3D G3DSA:1.10.3090.10 146 350 1.9E-27 T 11-10-2018 AM1136 348b272c7c3bd91f69e0c876c230dc09 419 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 188 233 2.2E-8 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM1136 348b272c7c3bd91f69e0c876c230dc09 419 SUPERFAMILY SSF81891 146 401 2.62E-43 T 11-10-2018 AM1136 348b272c7c3bd91f69e0c876c230dc09 419 Pfam PF01743 Poly A polymerase head domain 25 146 8.5E-30 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 AM1164 f80158e472e8011fc4030e9073bd27d6 405 Pfam PF01617 Surface antigen 61 404 1.1E-39 T 11-10-2018 IPR002566 Surface antigen msp4 AM1164 f80158e472e8011fc4030e9073bd27d6 405 SUPERFAMILY SSF56925 62 367 9.16E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1164 f80158e472e8011fc4030e9073bd27d6 405 Gene3D G3DSA:2.40.160.20 238 379 2.7E-6 T 11-10-2018 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 Pfam PF00252 Ribosomal protein L16p/L10e 9 135 4.1E-45 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 87 98 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 8 132 3.2E-51 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 6 139 33.624 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 PRINTS PR00060 Ribosomal protein L16 signature 29 41 2.3E-33 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 PRINTS PR00060 Ribosomal protein L16 signature 63 92 2.3E-33 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 PRINTS PR00060 Ribosomal protein L16 signature 47 58 2.3E-33 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 PRINTS PR00060 Ribosomal protein L16 signature 93 122 2.3E-33 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 Gene3D G3DSA:3.90.1170.10 6 141 8.1E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AM905 589db1d2e12d4ec1e03bd18bd0a74397 142 SUPERFAMILY SSF54686 7 138 1.44E-50 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 AM313 40715deef558942012a73d484cdfdccf 301 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 298 3.9E-75 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM313 40715deef558942012a73d484cdfdccf 301 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 294 29.665 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 AM313 40715deef558942012a73d484cdfdccf 301 Pfam PF02911 Formyl transferase, C-terminal domain 201 292 5.9E-18 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM313 40715deef558942012a73d484cdfdccf 301 SUPERFAMILY SSF53328 1 201 1.18E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM313 40715deef558942012a73d484cdfdccf 301 Gene3D G3DSA:3.10.25.10 204 301 1.6E-14 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM313 40715deef558942012a73d484cdfdccf 301 Gene3D G3DSA:3.40.50.170 1 203 5.1E-71 T 11-10-2018 AM313 40715deef558942012a73d484cdfdccf 301 SUPERFAMILY SSF50486 201 296 3.34E-16 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 AM313 40715deef558942012a73d484cdfdccf 301 Pfam PF00551 Formyl transferase 2 180 8.1E-38 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:1.10.150.390 1307 1367 4.2E-27 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 Pfam PF04997 RNA polymerase Rpb1, domain 1 14 343 8.4E-72 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 486 5.4E-33 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:1.10.132.30 641 781 6.6E-62 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Pfam PF04998 RNA polymerase Rpb1, domain 5 757 1306 1.7E-68 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:1.10.274.100 562 640 2.5E-14 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:1.10.274.100 491 561 2.7E-17 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 SUPERFAMILY SSF64484 15 1354 0.0 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 SMART SM00663 235 515 9.3E-159 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 644 3.3E-23 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:2.40.50.100 939 1013 7.6E-21 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 754 9.4E-17 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:1.10.40.90 375 417 7.8E-19 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:2.40.50.100 1140 1206 2.0E-60 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:1.10.1790.20 1124 1305 2.0E-60 T 11-10-2018 AM263 54e185304e51f9b0e6733049c5d158df 1415 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 9 1368 17.668 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 18 1010 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM263 54e185304e51f9b0e6733049c5d158df 1415 Gene3D G3DSA:2.40.50.100 1014 1115 6.1E-29 T 11-10-2018 AM112 75f9ff771b5a28cec81ac13adc52c81c 422 Gene3D G3DSA:1.20.1250.20 19 211 1.8E-20 T 11-10-2018 AM112 75f9ff771b5a28cec81ac13adc52c81c 422 SUPERFAMILY SSF103473 20 415 7.46E-38 T 11-10-2018 IPR036259 MFS transporter superfamily AM112 75f9ff771b5a28cec81ac13adc52c81c 422 Gene3D G3DSA:1.20.1250.20 212 417 7.7E-8 T 11-10-2018 AM112 75f9ff771b5a28cec81ac13adc52c81c 422 Pfam PF07690 Major Facilitator Superfamily 32 363 1.2E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 251 481 3.8E-69 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 Gene3D G3DSA:1.20.1640.10 333 499 9.0E-8 T 11-10-2018 AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 SUPERFAMILY SSF82866 298 492 4.84E-39 T 11-10-2018 AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 Pfam PF02355 Protein export membrane protein 322 489 3.3E-16 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 Gene3D G3DSA:3.30.1360.200 188 319 7.0E-47 T 11-10-2018 AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 Pfam PF07549 SecD/SecF GG Motif 32 54 9.7E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 501 37.469 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 Gene3D G3DSA:3.30.70.3400 137 325 7.0E-47 T 11-10-2018 AM1245 ad5ae348f91707897cf2b09d5ceb1bb6 501 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 488 1.2E-117 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AM752 1f967ea09a5e6b29d135efb225cd60b0 387 Gene3D G3DSA:1.10.1040.10 187 308 7.7E-7 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM752 1f967ea09a5e6b29d135efb225cd60b0 387 SUPERFAMILY SSF48179 185 289 5.61E-10 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 Pfam PF07650 KH domain 38 109 6.0E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 SUPERFAMILY SSF54821 106 205 1.31E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 Gene3D G3DSA:3.30.300.20 17 106 3.8E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta AM906 619e070e13a7f13af91f3a8d61ef13f9 211 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 206 4.5E-88 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 3.3E-38 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 36.833 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 SUPERFAMILY SSF54814 2 105 1.05E-31 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 Gene3D G3DSA:3.30.1140.32 107 206 7.6E-44 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 SMART SM00322 59 124 2.0E-4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 AM906 619e070e13a7f13af91f3a8d61ef13f9 211 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM982 370f618ace927f4f485e0b90d4991834 217 Gene3D G3DSA:1.10.287.130 8 77 1.1E-7 T 11-10-2018 AM982 370f618ace927f4f485e0b90d4991834 217 Pfam PF10090 Histidine phosphotransferase C-terminal domain 81 208 1.1E-22 T 11-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal AM982 370f618ace927f4f485e0b90d4991834 217 Gene3D G3DSA:3.30.565.10 78 216 2.2E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM654 43c8234290c874731e9c22d53aa49836 133 Pfam PF01592 NifU-like N terminal domain 3 126 8.1E-50 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM654 43c8234290c874731e9c22d53aa49836 133 Gene3D G3DSA:3.90.1010.10 1 132 8.8E-54 T 11-10-2018 AM654 43c8234290c874731e9c22d53aa49836 133 SUPERFAMILY SSF82649 2 126 8.89E-46 T 11-10-2018 AM654 43c8234290c874731e9c22d53aa49836 133 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 1.2E-63 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 247 31.743 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 SUPERFAMILY SSF55120 1 247 1.58E-77 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 242 1.0E-56 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 Gene3D G3DSA:3.30.70.660 108 246 1.2E-45 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 Gene3D G3DSA:3.30.70.580 1 107 4.9E-33 T 11-10-2018 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 Pfam PF01416 tRNA pseudouridine synthase 145 247 2.7E-25 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 Pfam PF01416 tRNA pseudouridine synthase 5 105 1.1E-11 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM661 58533206f1cd260f2f8f704d7e9a9f0c 247 PIRSF PIRSF001430 1 247 4.6E-72 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 91 109 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 Gene3D G3DSA:1.10.1200.80 248 319 3.9E-10 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 Pfam PF01207 Dihydrouridine synthase (Dus) 13 310 7.9E-102 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 10 315 1.0E-116 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 SUPERFAMILY SSF51395 11 315 2.38E-88 T 11-10-2018 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 PIRSF PIRSF006621 2 319 2.6E-103 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AM492 fd40edc3edf7aebc667bda7ec5204dce 320 Gene3D G3DSA:3.20.20.70 8 244 2.3E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM1185 166ca462877fdd73256337a4e7883afb 349 SUPERFAMILY SSF52540 4 203 2.07E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1185 166ca462877fdd73256337a4e7883afb 349 SUPERFAMILY SSF48019 216 330 1.79E-8 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM1185 166ca462877fdd73256337a4e7883afb 349 Gene3D G3DSA:1.20.272.10 212 335 3.3E-10 T 11-10-2018 AM1185 166ca462877fdd73256337a4e7883afb 349 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 22 329 9.8E-28 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 AM1185 166ca462877fdd73256337a4e7883afb 349 Gene3D G3DSA:3.40.50.300 14 131 8.7E-6 T 11-10-2018 AM1327 7aa9932e2c73ea1244faaeaf8c76e1ff 397 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 11 396 23.58 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM1327 7aa9932e2c73ea1244faaeaf8c76e1ff 397 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 15 394 1.7E-122 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 AM1327 7aa9932e2c73ea1244faaeaf8c76e1ff 397 Pfam PF02601 Exonuclease VII, large subunit 126 319 4.0E-72 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM1327 7aa9932e2c73ea1244faaeaf8c76e1ff 397 Pfam PF02601 Exonuclease VII, large subunit 321 392 1.1E-7 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 AM1327 7aa9932e2c73ea1244faaeaf8c76e1ff 397 Pfam PF13742 OB-fold nucleic acid binding domain 14 102 4.3E-21 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 AM1192 f041391c5414d92ea64efa795f81ff57 433 Gene3D G3DSA:2.40.50.100 3 103 4.1E-28 T 11-10-2018 AM1192 f041391c5414d92ea64efa795f81ff57 433 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 433 2.0E-144 T 11-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 AM1192 f041391c5414d92ea64efa795f81ff57 433 SUPERFAMILY SSF52777 207 432 4.05E-82 T 11-10-2018 AM1192 f041391c5414d92ea64efa795f81ff57 433 SUPERFAMILY SSF47005 150 194 1.24E-10 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AM1192 f041391c5414d92ea64efa795f81ff57 433 Gene3D G3DSA:3.30.559.10 196 430 4.9E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM1192 f041391c5414d92ea64efa795f81ff57 433 Gene3D G3DSA:4.10.320.10 148 195 6.8E-15 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 AM1192 f041391c5414d92ea64efa795f81ff57 433 Pfam PF02817 e3 binding domain 155 190 1.1E-12 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 AM1192 f041391c5414d92ea64efa795f81ff57 433 SUPERFAMILY SSF51230 2 91 7.2E-24 T 11-10-2018 IPR011053 Single hybrid motif AM1192 f041391c5414d92ea64efa795f81ff57 433 Pfam PF00364 Biotin-requiring enzyme 5 77 6.7E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AM1192 f041391c5414d92ea64efa795f81ff57 433 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 208 432 2.4E-85 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AM343 101b24ad712d96e64ca83fe73207f3f4 172 Gene3D G3DSA:1.20.1550.10 4 158 2.4E-12 T 11-10-2018 IPR023380 DsbB-like superfamily AM343 101b24ad712d96e64ca83fe73207f3f4 172 Pfam PF02600 Disulfide bond formation protein DsbB 8 150 1.8E-24 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 AM343 101b24ad712d96e64ca83fe73207f3f4 172 SUPERFAMILY SSF158442 11 150 4.32E-26 T 11-10-2018 IPR023380 DsbB-like superfamily AM343 101b24ad712d96e64ca83fe73207f3f4 172 PIRSF PIRSF033913 2 156 5.8E-25 T 11-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Gene3D G3DSA:1.10.1030.10 405 548 6.9E-40 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 SUPERFAMILY SSF52440 559 682 4.89E-41 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM933 1671e26176bccedb6c235c154a8a1b85 1102 Gene3D G3DSA:3.40.50.1380 942 1080 4.8E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM933 1671e26176bccedb6c235c154a8a1b85 1102 Pfam PF02142 MGS-like domain 963 1046 9.8E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AM933 1671e26176bccedb6c235c154a8a1b85 1102 SMART SM01096 422 544 1.0E-59 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 SUPERFAMILY SSF52440 1 127 1.58E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM933 1671e26176bccedb6c235c154a8a1b85 1102 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 1.6E-64 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 879 6.1E-29 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Gene3D G3DSA:3.40.50.20 1 116 6.3E-45 T 11-10-2018 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 12.343 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 SUPERFAMILY SSF52335 941 1078 1.27E-37 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily AM933 1671e26176bccedb6c235c154a8a1b85 1102 SUPERFAMILY SSF48108 396 546 2.35E-44 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 544 1.2E-37 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Gene3D G3DSA:3.30.470.20 673 941 8.7E-104 T 11-10-2018 AM933 1671e26176bccedb6c235c154a8a1b85 1102 SUPERFAMILY SSF56059 128 401 6.19E-97 T 11-10-2018 AM933 1671e26176bccedb6c235c154a8a1b85 1102 SMART SM00851 961 1047 2.0E-29 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain AM933 1671e26176bccedb6c235c154a8a1b85 1102 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Gene3D G3DSA:3.30.470.20 119 403 1.3E-111 T 11-10-2018 AM933 1671e26176bccedb6c235c154a8a1b85 1102 Gene3D G3DSA:3.40.50.20 557 669 1.8E-41 T 11-10-2018 AM933 1671e26176bccedb6c235c154a8a1b85 1102 SUPERFAMILY SSF56059 680 939 1.54E-93 T 11-10-2018 AM933 1671e26176bccedb6c235c154a8a1b85 1102 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 298 305 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AM944 72f4bc90c46c356daa3c63274fda842e 549 Gene3D G3DSA:3.50.7.10 172 381 2.3E-189 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AM944 72f4bc90c46c356daa3c63274fda842e 549 SUPERFAMILY SSF54849 136 204 4.81E-21 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AM944 72f4bc90c46c356daa3c63274fda842e 549 Gene3D G3DSA:3.30.260.10 137 412 2.3E-189 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily AM944 72f4bc90c46c356daa3c63274fda842e 549 TIGRFAM TIGR02348 GroEL: chaperonin GroL 12 530 1.0E-189 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 Hamap MF_00600 60 kDa chaperonin [groL]. 1 549 35.447 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 PRINTS PR00298 60kDa chaperonin signature 82 109 1.0E-64 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 PRINTS PR00298 60kDa chaperonin signature 352 377 1.0E-64 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 PRINTS PR00298 60kDa chaperonin signature 268 291 1.0E-64 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 PRINTS PR00298 60kDa chaperonin signature 400 421 1.0E-64 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 PRINTS PR00298 60kDa chaperonin signature 26 52 1.0E-64 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 Gene3D G3DSA:1.10.560.10 12 525 2.3E-189 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AM944 72f4bc90c46c356daa3c63274fda842e 549 SUPERFAMILY SSF48592 8 525 8.16E-51 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily AM944 72f4bc90c46c356daa3c63274fda842e 549 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 528 2.0E-94 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AM944 72f4bc90c46c356daa3c63274fda842e 549 ProSitePatterns PS00296 Chaperonins cpn60 signature. 407 418 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 AM944 72f4bc90c46c356daa3c63274fda842e 549 SUPERFAMILY SSF52029 186 378 2.79E-75 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily AM339 11d5beb35fe392f099de3cb7c8cc798f 115 Pfam PF00550 Phosphopantetheine attachment site 47 108 5.2E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain AM339 11d5beb35fe392f099de3cb7c8cc798f 115 ProSitePatterns PS00012 Phosphopantetheine attachment site. 67 82 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site AM339 11d5beb35fe392f099de3cb7c8cc798f 115 Hamap MF_01217 Acyl carrier protein [acpP]. 35 112 14.671 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM339 11d5beb35fe392f099de3cb7c8cc798f 115 Gene3D G3DSA:1.10.1200.10 30 114 1.2E-25 T 11-10-2018 IPR036736 ACP-like superfamily AM339 11d5beb35fe392f099de3cb7c8cc798f 115 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 71 108 4.0E-14 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 AM339 11d5beb35fe392f099de3cb7c8cc798f 115 SUPERFAMILY SSF47336 34 110 1.83E-14 T 11-10-2018 IPR036736 ACP-like superfamily AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 PIRSF PIRSF001563 9 428 4.1E-107 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 TIGRFAM TIGR01499 folC: bifunctional protein FolC 19 426 1.9E-110 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 132 147 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 Gene3D G3DSA:3.40.1190.10 7 285 7.6E-83 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 SUPERFAMILY SSF53244 287 426 1.72E-21 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 SUPERFAMILY SSF53623 14 284 4.58E-83 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 Gene3D G3DSA:3.90.190.20 297 426 1.9E-21 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM699 d88b6dacc6d1de2de2ee7690ed76218a 430 Pfam PF08245 Mur ligase middle domain 42 259 2.1E-12 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM409 60f0333cb80173a542b0f1530b81d33b 123 PRINTS PR00332 Histidine triad family signature 36 54 7.1E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AM409 60f0333cb80173a542b0f1530b81d33b 123 PRINTS PR00332 Histidine triad family signature 15 31 7.1E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AM409 60f0333cb80173a542b0f1530b81d33b 123 PRINTS PR00332 Histidine triad family signature 103 113 7.1E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AM409 60f0333cb80173a542b0f1530b81d33b 123 Gene3D G3DSA:3.30.428.10 14 119 1.1E-29 T 11-10-2018 IPR036265 HIT-like superfamily AM409 60f0333cb80173a542b0f1530b81d33b 123 SUPERFAMILY SSF54197 7 118 4.11E-30 T 11-10-2018 IPR036265 HIT-like superfamily AM409 60f0333cb80173a542b0f1530b81d33b 123 Pfam PF01230 HIT domain 21 115 1.5E-23 T 11-10-2018 IPR001310 Histidine triad (HIT) protein AM409 60f0333cb80173a542b0f1530b81d33b 123 ProSitePatterns PS00892 HIT domain signature. 96 114 - T 11-10-2018 IPR019808 Histidine triad, conserved site AM058 6467ad90b151b98b64cf3d700fb910c3 428 SUPERFAMILY SSF51161 243 411 4.51E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AM058 6467ad90b151b98b64cf3d700fb910c3 428 Gene3D G3DSA:3.90.550.10 1 219 1.9E-32 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM058 6467ad90b151b98b64cf3d700fb910c3 428 SUPERFAMILY SSF53448 1 240 4.28E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM058 6467ad90b151b98b64cf3d700fb910c3 428 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 427 29.787 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 AM058 6467ad90b151b98b64cf3d700fb910c3 428 Pfam PF12804 MobA-like NTP transferase domain 4 136 1.1E-17 T 11-10-2018 IPR025877 MobA-like NTP transferase AM058 6467ad90b151b98b64cf3d700fb910c3 428 Gene3D G3DSA:2.160.10.10 220 428 7.2E-53 T 11-10-2018 AM058 6467ad90b151b98b64cf3d700fb910c3 428 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 293 326 4.3E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AM058 6467ad90b151b98b64cf3d700fb910c3 428 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 372 404 6.0E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AM058 6467ad90b151b98b64cf3d700fb910c3 428 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 378 406 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 AM059 d7f15b02a08a235617b61749f8ab5f46 89 SUPERFAMILY SSF54565 3 79 9.55E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM059 d7f15b02a08a235617b61749f8ab5f46 89 Pfam PF00886 Ribosomal protein S16 9 70 7.0E-25 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM059 d7f15b02a08a235617b61749f8ab5f46 89 Gene3D G3DSA:3.30.1320.10 1 87 1.8E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM059 d7f15b02a08a235617b61749f8ab5f46 89 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.924 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM059 d7f15b02a08a235617b61749f8ab5f46 89 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 1.2E-28 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM678 a2b99b9bf695d256f39e700b62470fce 579 SUPERFAMILY SSF55190 7 119 4.58E-15 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 SUPERFAMILY SSF52374 122 466 1.04E-82 T 11-10-2018 AM678 a2b99b9bf695d256f39e700b62470fce 579 SUPERFAMILY SSF47323 450 578 2.81E-30 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM678 a2b99b9bf695d256f39e700b62470fce 579 Pfam PF00750 tRNA synthetases class I (R) 120 439 1.1E-14 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 SMART SM01016 12 99 3.9E-17 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM678 a2b99b9bf695d256f39e700b62470fce 579 Pfam PF05746 DALR anticodon binding domain 455 578 5.1E-23 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM678 a2b99b9bf695d256f39e700b62470fce 579 SMART SM00836 455 578 1.9E-46 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM678 a2b99b9bf695d256f39e700b62470fce 579 Hamap MF_00123 Arginine--tRNA ligase [argS]. 29 578 22.279 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 Gene3D G3DSA:3.30.1360.70 17 124 7.7E-14 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 Gene3D G3DSA:1.10.730.10 450 578 7.5E-136 T 11-10-2018 AM678 a2b99b9bf695d256f39e700b62470fce 579 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 33 98 4.3E-12 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM678 a2b99b9bf695d256f39e700b62470fce 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 138 147 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM678 a2b99b9bf695d256f39e700b62470fce 579 Gene3D G3DSA:3.40.50.620 128 449 7.5E-136 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM678 a2b99b9bf695d256f39e700b62470fce 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 324 345 7.0E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 167 180 7.0E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 143 159 7.0E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 PRINTS PR01038 Arginyl-tRNA synthetase signature 128 143 7.0E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM678 a2b99b9bf695d256f39e700b62470fce 579 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 38 578 1.8E-101 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 AM418 3d142ba6c8d4381888bb71c07859f7eb 529 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 173 3.9E-15 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM418 3d142ba6c8d4381888bb71c07859f7eb 529 SUPERFAMILY SSF56519 67 186 6.67E-30 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AM418 3d142ba6c8d4381888bb71c07859f7eb 529 Gene3D G3DSA:3.30.450.330 198 519 1.0E-91 T 11-10-2018 AM418 3d142ba6c8d4381888bb71c07859f7eb 529 Pfam PF00905 Penicillin binding protein transpeptidase domain 224 515 2.0E-58 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM418 3d142ba6c8d4381888bb71c07859f7eb 529 Gene3D G3DSA:3.40.710.10 258 437 1.0E-91 T 11-10-2018 AM418 3d142ba6c8d4381888bb71c07859f7eb 529 SUPERFAMILY SSF56601 199 526 5.05E-79 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM418 3d142ba6c8d4381888bb71c07859f7eb 529 Gene3D G3DSA:3.90.1310.10 59 195 5.0E-17 T 11-10-2018 AM651 07c69ebf300ef3fd252e22fd3741f736 602 SUPERFAMILY SSF100920 384 531 2.75E-40 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 197 210 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 Gene3D G3DSA:2.60.34.10 378 549 2.6E-45 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 Pfam PF00012 Hsp70 protein 18 579 1.5E-134 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 Gene3D G3DSA:3.90.640.10 230 310 1.6E-98 T 11-10-2018 AM651 07c69ebf300ef3fd252e22fd3741f736 602 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 SUPERFAMILY SSF53067 15 186 3.24E-42 T 11-10-2018 AM651 07c69ebf300ef3fd252e22fd3741f736 602 Gene3D G3DSA:3.30.420.40 19 373 1.6E-98 T 11-10-2018 AM651 07c69ebf300ef3fd252e22fd3741f736 602 SUPERFAMILY SSF53067 193 377 1.04E-42 T 11-10-2018 AM651 07c69ebf300ef3fd252e22fd3741f736 602 Gene3D G3DSA:3.30.420.40 185 360 1.6E-98 T 11-10-2018 AM651 07c69ebf300ef3fd252e22fd3741f736 602 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 20 27 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 464 480 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 143 163 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 203 213 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 384 403 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 45 57 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 328 344 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 16 29 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM651 07c69ebf300ef3fd252e22fd3741f736 602 PRINTS PR00301 70kDa heat shock protein signature 359 379 1.7E-42 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 AM1064 e0ccb28be6dcc1d1c44c544c3c14f8f8 370 TIGRFAM TIGR01933 hflK: HflK protein 80 358 6.6E-81 T 11-10-2018 IPR010201 HflK GO:0016021 AM1064 e0ccb28be6dcc1d1c44c544c3c14f8f8 370 SUPERFAMILY SSF117892 148 263 1.31E-17 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AM1064 e0ccb28be6dcc1d1c44c544c3c14f8f8 370 Pfam PF01145 SPFH domain / Band 7 family 82 272 4.3E-24 T 11-10-2018 IPR001107 Band 7 domain AM1064 e0ccb28be6dcc1d1c44c544c3c14f8f8 370 Gene3D G3DSA:3.30.479.30 144 248 3.8E-17 T 11-10-2018 AM1064 e0ccb28be6dcc1d1c44c544c3c14f8f8 370 SMART SM00244 78 257 5.1E-24 T 11-10-2018 IPR001107 Band 7 domain AM137 4c386a624dfa7d6e178cc42d925863ee 242 Gene3D G3DSA:3.30.200.20 8 235 3.5E-87 T 11-10-2018 AM137 4c386a624dfa7d6e178cc42d925863ee 242 Gene3D G3DSA:3.30.470.20 86 224 3.5E-87 T 11-10-2018 AM137 4c386a624dfa7d6e178cc42d925863ee 242 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 1 210 6.7E-61 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 AM137 4c386a624dfa7d6e178cc42d925863ee 242 Pfam PF01259 SAICAR synthetase 8 235 3.1E-57 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM137 4c386a624dfa7d6e178cc42d925863ee 242 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 238 29.07 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM137 4c386a624dfa7d6e178cc42d925863ee 242 SUPERFAMILY SSF56104 5 236 6.21E-75 T 11-10-2018 AM137 4c386a624dfa7d6e178cc42d925863ee 242 ProSitePatterns PS01058 SAICAR synthetase signature 2. 174 182 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM1208 30ce3dbd9f32f76e23e56ee7e58b039a 327 SUPERFAMILY SSF48576 9 326 3.68E-85 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM1208 30ce3dbd9f32f76e23e56ee7e58b039a 327 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 101 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM1208 30ce3dbd9f32f76e23e56ee7e58b039a 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 209 221 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site AM1208 30ce3dbd9f32f76e23e56ee7e58b039a 327 Gene3D G3DSA:1.10.600.10 5 327 6.1E-93 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily AM1208 30ce3dbd9f32f76e23e56ee7e58b039a 327 Pfam PF00348 Polyprenyl synthetase 37 273 2.1E-65 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 AM255 61be86ca7bb3771deb75bac6c5389349 70 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 11 61 6.9E-11 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM255 61be86ca7bb3771deb75bac6c5389349 70 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 10 63 4.8E-11 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 AM255 61be86ca7bb3771deb75bac6c5389349 70 Gene3D G3DSA:1.20.5.1030 5 63 1.8E-10 T 11-10-2018 IPR038379 SecE superfamily AM255 61be86ca7bb3771deb75bac6c5389349 70 Hamap MF_00422 Protein translocase subunit SecE [secE]. 7 62 10.421 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 AM645 4293c2b196db2188d32ca4404dfafaca 201 Pfam PF02441 Flavoprotein 15 180 8.8E-27 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM645 4293c2b196db2188d32ca4404dfafaca 201 SUPERFAMILY SSF52507 15 197 1.7E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM645 4293c2b196db2188d32ca4404dfafaca 201 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 15 200 35.048 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AM645 4293c2b196db2188d32ca4404dfafaca 201 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 16 198 2.4E-66 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like AM645 4293c2b196db2188d32ca4404dfafaca 201 Gene3D G3DSA:3.40.50.1950 15 201 4.6E-73 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM124 dfbe26a40c1bf660a614370d78cb5838 398 Pfam PF03429 Major surface protein 1B 16 68 3.7E-24 T 11-10-2018 IPR005091 Major surface protein 1B AM124 dfbe26a40c1bf660a614370d78cb5838 398 Pfam PF03429 Major surface protein 1B 65 122 4.6E-28 T 11-10-2018 IPR005091 Major surface protein 1B AM124 dfbe26a40c1bf660a614370d78cb5838 398 Pfam PF03429 Major surface protein 1B 121 382 3.6E-159 T 11-10-2018 IPR005091 Major surface protein 1B AM865 9c5777f5c9385da341591889a2d1f790 491 Pfam PF03796 DnaB-like helicase C terminal domain 199 475 5.7E-96 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 AM865 9c5777f5c9385da341591889a2d1f790 491 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 22 477 1.3E-137 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AM865 9c5777f5c9385da341591889a2d1f790 491 Gene3D G3DSA:1.10.860.10 20 177 1.5E-27 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AM865 9c5777f5c9385da341591889a2d1f790 491 SUPERFAMILY SSF52540 198 469 2.0E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM865 9c5777f5c9385da341591889a2d1f790 491 SUPERFAMILY SSF48024 21 130 1.23E-24 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 AM865 9c5777f5c9385da341591889a2d1f790 491 Pfam PF00772 DnaB-like helicase N terminal domain 21 120 1.0E-20 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AM865 9c5777f5c9385da341591889a2d1f790 491 Gene3D G3DSA:3.40.50.300 178 476 2.1E-95 T 11-10-2018 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 ProSitePatterns PS01134 FtsZ protein signature 1. 55 89 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 22 344 1.2E-120 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 Pfam PF12327 FtsZ family, C-terminal domain 233 328 1.9E-37 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 Gene3D G3DSA:3.30.1330.20 232 343 6.1E-37 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 PRINTS PR00423 Cell division protein FtsZ signature 200 222 1.0E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 PRINTS PR00423 Cell division protein FtsZ signature 109 129 1.0E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 PRINTS PR00423 Cell division protein FtsZ signature 137 158 1.0E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 PRINTS PR00423 Cell division protein FtsZ signature 223 244 1.0E-50 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 Gene3D G3DSA:3.40.50.1440 15 231 1.7E-77 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 SMART SM00865 218 336 1.4E-58 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 SUPERFAMILY SSF55307 215 329 2.06E-41 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 SMART SM00864 24 216 2.2E-107 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 24 185 4.2E-42 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 20 364 36.362 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 ProSitePatterns PS01135 FtsZ protein signature 2. 108 129 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AM1261 ab6d6a234f1b47abe26e46698c0a8926 417 SUPERFAMILY SSF52490 23 219 5.36E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Pfam PF00805 Pentapeptide repeats (8 copies) 134 173 7.4E-8 T 11-10-2018 IPR001646 Pentapeptide repeat AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Pfam PF00805 Pentapeptide repeats (8 copies) 179 213 7.2E-8 T 11-10-2018 IPR001646 Pentapeptide repeat AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Gene3D G3DSA:2.160.20.100 1 155 4.8E-27 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Gene3D G3DSA:2.160.20.100 262 426 8.2E-16 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 SUPERFAMILY SSF141571 2 160 5.1E-29 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Pfam PF13599 Pentapeptide repeats (9 copies) 3 76 6.8E-11 T 11-10-2018 IPR001646 Pentapeptide repeat AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Pfam PF13599 Pentapeptide repeats (9 copies) 440 506 5.7E-13 T 11-10-2018 IPR001646 Pentapeptide repeat AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 SUPERFAMILY SSF141571 126 284 4.94E-29 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 SUPERFAMILY SSF141571 423 504 3.66E-17 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Gene3D G3DSA:2.160.20.100 156 261 1.8E-21 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 Gene3D G3DSA:2.160.20.100 427 536 2.3E-16 T 11-10-2018 AM1108 a4ef0fde2e146fd3fa17bed73d77946e 597 SUPERFAMILY SSF141571 261 405 3.53E-16 T 11-10-2018 AM1356 c19f08837c6d4cc9187dce61fdd5cb7d 196 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 60 75 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM1356 c19f08837c6d4cc9187dce61fdd5cb7d 196 SUPERFAMILY SSF69765 21 182 4.84E-56 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM1356 c19f08837c6d4cc9187dce61fdd5cb7d 196 Gene3D G3DSA:3.30.1330.50 20 188 6.0E-59 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM1356 c19f08837c6d4cc9187dce61fdd5cb7d 196 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 23 179 3.2E-53 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM1356 c19f08837c6d4cc9187dce61fdd5cb7d 196 Pfam PF02542 YgbB family 22 179 1.1E-53 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM1356 c19f08837c6d4cc9187dce61fdd5cb7d 196 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 22 181 29.773 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 AM199 bad3c0dc176357698329d5317d67af1e 325 Pfam PF02938 GAD domain 50 142 3.5E-16 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 AM199 bad3c0dc176357698329d5317d67af1e 325 Gene3D G3DSA:3.30.1360.30 16 158 3.6E-36 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM199 bad3c0dc176357698329d5317d67af1e 325 SUPERFAMILY SSF55681 16 294 2.87E-38 T 11-10-2018 AM199 bad3c0dc176357698329d5317d67af1e 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 10 294 1.2E-33 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM199 bad3c0dc176357698329d5317d67af1e 325 SUPERFAMILY SSF55261 31 158 1.36E-34 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 AM199 bad3c0dc176357698329d5317d67af1e 325 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 227 2.4E-8 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM199 bad3c0dc176357698329d5317d67af1e 325 PRINTS PR01042 Aspartyl-tRNA synthetase signature 255 269 2.4E-8 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM199 bad3c0dc176357698329d5317d67af1e 325 Gene3D G3DSA:3.30.930.10 159 297 7.7E-24 T 11-10-2018 AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 Gene3D G3DSA:3.40.50.150 1 194 4.7E-60 T 11-10-2018 AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 Pfam PF00398 Ribosomal RNA adenine dimethylase 6 261 5.9E-49 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 SUPERFAMILY SSF53335 6 262 3.88E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 6 261 49.449 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 38 66 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 258 8.2E-71 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 Gene3D G3DSA:1.10.8.100 198 261 9.1E-12 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 AM558 dcc94b3326c4ce119bdbdfcc977f1548 270 SMART SM00650 22 193 1.1E-54 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AM202 fcd1d35f229b29520e5b163703c4a655 195 Pfam PF04972 BON domain 46 111 2.0E-14 T 11-10-2018 IPR007055 BON domain AM202 fcd1d35f229b29520e5b163703c4a655 195 Pfam PF04972 BON domain 123 187 5.2E-10 T 11-10-2018 IPR007055 BON domain AM202 fcd1d35f229b29520e5b163703c4a655 195 SMART SM00749 51 114 0.089 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM202 fcd1d35f229b29520e5b163703c4a655 195 SMART SM00749 127 190 1.8E-10 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 SUPERFAMILY SSF81343 4 126 2.4E-28 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 PIRSF PIRSF000178 2 126 7.9E-36 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 120 4.4E-28 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 123 1.0E-37 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 6 30 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM290 bda84147b13f8d50e8ce0f6d3c69442b 127 Gene3D G3DSA:1.20.1300.10 2 126 3.1E-34 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM928 f1980afb9739a409f5fcaa605c09bdac 327 Pfam PF00107 Zinc-binding dehydrogenase 155 264 8.0E-20 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AM928 f1980afb9739a409f5fcaa605c09bdac 327 SMART SM00829 14 325 1.6E-13 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AM928 f1980afb9739a409f5fcaa605c09bdac 327 Gene3D G3DSA:3.90.180.10 18 321 1.1E-90 T 11-10-2018 AM928 f1980afb9739a409f5fcaa605c09bdac 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 2.7E-10 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AM928 f1980afb9739a409f5fcaa605c09bdac 327 Gene3D G3DSA:3.40.50.720 127 271 1.1E-90 T 11-10-2018 AM928 f1980afb9739a409f5fcaa605c09bdac 327 SUPERFAMILY SSF51735 115 271 8.85E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM928 f1980afb9739a409f5fcaa605c09bdac 327 SUPERFAMILY SSF50129 5 148 9.28E-34 T 11-10-2018 IPR011032 GroES-like superfamily AM860 aaa5e64038a1d8826ddae847b428e577 606 Pfam PF02867 Ribonucleotide reductase, barrel domain 93 413 9.8E-75 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 24 89 1.3E-13 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 Pfam PF02867 Ribonucleotide reductase, barrel domain 422 567 1.0E-32 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 31 412 2.4E-104 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 357 379 1.1E-18 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 385 408 1.1E-18 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 166 185 1.1E-18 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 PRINTS PR01183 Ribonucleotide reductase large chain signature 278 289 1.1E-18 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 SUPERFAMILY SSF48168 17 88 1.83E-14 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM860 aaa5e64038a1d8826ddae847b428e577 606 Gene3D G3DSA:3.20.70.20 2 578 3.7E-170 T 11-10-2018 AM860 aaa5e64038a1d8826ddae847b428e577 606 SUPERFAMILY SSF51998 91 572 2.59E-135 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 SUPERFAMILY SSF55874 4 209 3.42E-67 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM644 635b1cc15458270ae12ff16d891daf4e 793 SMART SM00433 34 786 1.9E-228 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM644 635b1cc15458270ae12ff16d891daf4e 793 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM644 635b1cc15458270ae12ff16d891daf4e 793 Pfam PF01751 Toprim domain 426 527 3.1E-17 T 11-10-2018 IPR006171 TOPRIM domain AM644 635b1cc15458270ae12ff16d891daf4e 793 Gene3D G3DSA:3.30.230.10 225 404 4.8E-63 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM644 635b1cc15458270ae12ff16d891daf4e 793 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 792 1.4E-276 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 Gene3D G3DSA:3.40.50.670 695 792 2.2E-22 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM644 635b1cc15458270ae12ff16d891daf4e 793 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 721 782 4.6E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 170 1.5E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM644 635b1cc15458270ae12ff16d891daf4e 793 SUPERFAMILY SSF54211 228 398 5.88E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM644 635b1cc15458270ae12ff16d891daf4e 793 Gene3D G3DSA:3.40.50.670 405 614 1.3E-68 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM644 635b1cc15458270ae12ff16d891daf4e 793 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 793 86.814 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 Gene3D G3DSA:3.30.565.10 2 218 9.8E-85 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM644 635b1cc15458270ae12ff16d891daf4e 793 SMART SM00387 30 175 2.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM644 635b1cc15458270ae12ff16d891daf4e 793 Pfam PF00204 DNA gyrase B 227 397 1.6E-53 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 367 381 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 746 758 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 180 195 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 477 486 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 226 248 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 249 267 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 4 14 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 381 401 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 319 335 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 762 778 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR01159 DNA gyrase subunit B signature 195 208 5.3E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AM644 635b1cc15458270ae12ff16d891daf4e 793 SUPERFAMILY SSF56719 403 784 3.4E-77 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 275 288 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 494 510 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 512 529 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 69 82 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 725 741 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 427 441 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 112 126 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 34 49 6.5E-68 T 11-10-2018 AM644 635b1cc15458270ae12ff16d891daf4e 793 PRINTS PR00418 DNA topoisomerase II family signature 532 544 6.5E-68 T 11-10-2018 AM392 7f487805da9f7363a61f5d032b1690cf 358 SUPERFAMILY SSF52540 19 261 8.92E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM392 7f487805da9f7363a61f5d032b1690cf 358 SUPERFAMILY SSF50331 257 355 4.42E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal AM392 7f487805da9f7363a61f5d032b1690cf 358 Pfam PF00005 ABC transporter 43 181 1.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM392 7f487805da9f7363a61f5d032b1690cf 358 Gene3D G3DSA:3.40.50.300 18 265 6.1E-65 T 11-10-2018 AM392 7f487805da9f7363a61f5d032b1690cf 358 SMART SM00382 44 231 1.5E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain AM392 7f487805da9f7363a61f5d032b1690cf 358 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM1357 5017c09554badaecd81a9d4a1d408f8b 236 SUPERFAMILY SSF53448 5 231 2.58E-44 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM1357 5017c09554badaecd81a9d4a1d408f8b 236 Gene3D G3DSA:3.90.550.10 3 229 7.6E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases AM1357 5017c09554badaecd81a9d4a1d408f8b 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 231 1.3E-47 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 PIRSF PIRSF006250 1 272 1.1E-73 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 SUPERFAMILY SSF51690 105 270 3.14E-49 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 103 6.7E-23 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 105 269 2.3E-46 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 6 270 1.9E-76 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 Gene3D G3DSA:3.90.1170.20 8 269 9.5E-92 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 SUPERFAMILY SSF54675 2 103 4.32E-23 T 11-10-2018 AM1297 00d4039043b015a1a3cbd8f60eadf9ed 272 Gene3D G3DSA:3.20.20.70 108 260 9.5E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 PRINTS PR00063 Ribosomal protein L27 signature 4 28 9.7E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 PRINTS PR00063 Ribosomal protein L27 signature 29 53 9.7E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 PRINTS PR00063 Ribosomal protein L27 signature 54 78 9.7E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 25.412 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 TIGRFAM TIGR00062 L27: ribosomal protein bL27 2 81 7.1E-33 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 69 9.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 Pfam PF01016 Ribosomal L27 protein 2 79 3.0E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 SUPERFAMILY SSF110324 2 83 6.13E-32 T 11-10-2018 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM596 9e2b650d7f3166dd2cec3f76900c5c3b 90 Gene3D G3DSA:2.40.50.100 21 88 1.1E-27 T 11-10-2018 AM730 c00f752bade22d2ea62e1402b19eba43 619 SUPERFAMILY SSF52540 11 218 2.07E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM730 c00f752bade22d2ea62e1402b19eba43 619 SUPERFAMILY SSF50447 163 311 4.16E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM730 c00f752bade22d2ea62e1402b19eba43 619 SMART SM00838 408 496 0.0022 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AM730 c00f752bade22d2ea62e1402b19eba43 619 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 17 611 1.7E-270 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 SUPERFAMILY SSF54980 315 400 1.91E-11 T 11-10-2018 IPR035647 EF-G domain III/V-like AM730 c00f752bade22d2ea62e1402b19eba43 619 Gene3D G3DSA:3.30.70.240 402 494 1.1E-125 T 11-10-2018 AM730 c00f752bade22d2ea62e1402b19eba43 619 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 18 165 1.4E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 Pfam PF00009 Elongation factor Tu GTP binding domain 16 191 2.3E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 Gene3D G3DSA:2.40.50.250 495 611 1.1E-125 T 11-10-2018 AM730 c00f752bade22d2ea62e1402b19eba43 619 SUPERFAMILY SSF54980 411 525 1.53E-28 T 11-10-2018 IPR035647 EF-G domain III/V-like AM730 c00f752bade22d2ea62e1402b19eba43 619 Pfam PF00679 Elongation factor G C-terminus 409 492 3.8E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like AM730 c00f752bade22d2ea62e1402b19eba43 619 Gene3D G3DSA:3.40.50.300 14 209 3.7E-63 T 11-10-2018 AM730 c00f752bade22d2ea62e1402b19eba43 619 Pfam PF03144 Elongation factor Tu domain 2 231 301 1.9E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 Gene3D G3DSA:2.40.30.10 211 312 1.0E-27 T 11-10-2018 AM730 c00f752bade22d2ea62e1402b19eba43 619 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site AM730 c00f752bade22d2ea62e1402b19eba43 619 Gene3D G3DSA:3.30.70.870 319 602 1.1E-125 T 11-10-2018 AM730 c00f752bade22d2ea62e1402b19eba43 619 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM730 c00f752bade22d2ea62e1402b19eba43 619 PRINTS PR00315 GTP-binding elongation factor signature 19 32 2.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 4 435 1.1E-144 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 SUPERFAMILY SSF53738 3 179 6.67E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 SUPERFAMILY SSF53738 153 254 3.34E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 441 39.412 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Gene3D G3DSA:3.30.310.50 374 441 1.2E-8 T 11-10-2018 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 4.2E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 4.2E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 4.2E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Gene3D G3DSA:3.40.120.10 255 336 7.5E-61 T 11-10-2018 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 SUPERFAMILY SSF55957 401 439 4.97E-7 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Gene3D G3DSA:3.40.120.10 1 151 1.8E-35 T 11-10-2018 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Gene3D G3DSA:3.40.120.10 172 359 7.5E-61 T 11-10-2018 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 SUPERFAMILY SSF53738 240 370 1.65E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 400 438 9.4E-6 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 1.7E-34 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 155 252 4.3E-19 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM940 61e1ab3a68f23afc59e5fa49204a580a 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 362 5.4E-24 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AM1027 6eabb72a8813c377bb6a68baac7d924b 343 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 AM1027 6eabb72a8813c377bb6a68baac7d924b 343 SUPERFAMILY SSF52540 86 315 5.87E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1027 6eabb72a8813c377bb6a68baac7d924b 343 Gene3D G3DSA:3.40.50.300 79 333 8.8E-67 T 11-10-2018 AM1027 6eabb72a8813c377bb6a68baac7d924b 343 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 333 5.6E-81 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 AM1027 6eabb72a8813c377bb6a68baac7d924b 343 SUPERFAMILY SSF117916 1 91 1.77E-6 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily AM1027 6eabb72a8813c377bb6a68baac7d924b 343 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 334 31.152 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 Hamap MF_00158 Pantothenate synthetase [panC]. 24 298 33.01 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 SUPERFAMILY SSF52374 19 298 3.49E-86 T 11-10-2018 AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 Gene3D G3DSA:3.40.50.620 16 193 6.0E-59 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 47 108 1.8E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 23 298 1.6E-73 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 Pfam PF02569 Pantoate-beta-alanine ligase 25 296 5.8E-82 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 AM1089 c9d080a5cec6f6e7a9bcc0c7280a591b 299 Gene3D G3DSA:3.30.1300.10 198 299 6.1E-24 T 11-10-2018 AM1069 c18c51dec77822879e5e4b4e782f467f 232 Gene3D G3DSA:1.10.1520.10 9 152 4.3E-39 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AM1069 c18c51dec77822879e5e4b4e782f467f 232 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 15 228 6.2E-67 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM1069 c18c51dec77822879e5e4b4e782f467f 232 Hamap MF_00104 Ribonuclease 3 [rnc]. 13 225 28.085 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 AM1069 c18c51dec77822879e5e4b4e782f467f 232 SUPERFAMILY SSF69065 6 164 9.42E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 AM1069 c18c51dec77822879e5e4b4e782f467f 232 Gene3D G3DSA:3.30.160.20 160 230 3.7E-22 T 11-10-2018 AM1069 c18c51dec77822879e5e4b4e782f467f 232 SMART SM00535 25 156 7.9E-38 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AM1069 c18c51dec77822879e5e4b4e782f467f 232 Pfam PF14622 Ribonuclease-III-like 25 149 3.8E-28 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AM1069 c18c51dec77822879e5e4b4e782f467f 232 SMART SM00358 162 229 6.3E-20 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AM1069 c18c51dec77822879e5e4b4e782f467f 232 SUPERFAMILY SSF54768 118 229 1.57E-26 T 11-10-2018 AM1069 c18c51dec77822879e5e4b4e782f467f 232 Pfam PF00035 Double-stranded RNA binding motif 162 227 1.0E-14 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain AM1069 c18c51dec77822879e5e4b4e782f467f 232 ProSitePatterns PS00517 Ribonuclease III family signature. 45 53 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 AM1207 518a4d106963837d419154c84b074b55 342 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 11 338 19.581 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM1207 518a4d106963837d419154c84b074b55 342 ProSitePatterns PS01347 MraY family signature 1. 56 68 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM1207 518a4d106963837d419154c84b074b55 342 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 25 337 2.9E-82 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM1207 518a4d106963837d419154c84b074b55 342 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 56 68 9.1E-5 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM1207 518a4d106963837d419154c84b074b55 342 ProSitePatterns PS01348 MraY family signature 2. 173 184 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM1207 518a4d106963837d419154c84b074b55 342 Pfam PF00953 Glycosyl transferase family 4 87 263 2.4E-32 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 AM170 0f6cc2eb99a00e00621e7213913be685 291 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 28 246 28.234 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 AM170 0f6cc2eb99a00e00621e7213913be685 291 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 32 238 1.5E-62 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 AM170 0f6cc2eb99a00e00621e7213913be685 291 Gene3D G3DSA:3.30.1360.170 14 253 6.5E-73 T 11-10-2018 AM170 0f6cc2eb99a00e00621e7213913be685 291 Pfam PF02511 Thymidylate synthase complementing protein 34 232 1.2E-56 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 AM170 0f6cc2eb99a00e00621e7213913be685 291 SUPERFAMILY SSF69796 24 245 3.27E-68 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 PRINTS PR01806 Virulence factor MviN signature 82 106 1.5E-41 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 PRINTS PR01806 Virulence factor MviN signature 3 19 1.5E-41 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 PRINTS PR01806 Virulence factor MviN signature 206 232 1.5E-41 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 PRINTS PR01806 Virulence factor MviN signature 106 127 1.5E-41 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 PRINTS PR01806 Virulence factor MviN signature 356 373 1.5E-41 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 PRINTS PR01806 Virulence factor MviN signature 304 323 1.5E-41 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 Pfam PF03023 MviN-like protein 1 424 4.2E-83 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM1229 ab75f8fd4de47d682e6bb28f04675a18 454 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 447 1.5E-83 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ AM127 b7b498e17e56cb21485bb4120105c673 999 Pfam PF13502 AsmA-like C-terminal region 838 955 1.5E-10 T 11-10-2018 IPR032712 AsmA-like, C-terminal AM127 b7b498e17e56cb21485bb4120105c673 999 Pfam PF13116 Protein of unknown function 344 470 3.6E-13 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 AM1340 b924f43797d3b5e3be519322b4998203 218 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 99 2.0E-48 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM1340 b924f43797d3b5e3be519322b4998203 218 SUPERFAMILY SSF50715 6 196 2.44E-52 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM1340 b924f43797d3b5e3be519322b4998203 218 Gene3D G3DSA:2.40.240.10 4 99 8.1E-26 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM1340 b924f43797d3b5e3be519322b4998203 218 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 189 1.4E-25 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain AM1340 b924f43797d3b5e3be519322b4998203 218 Pfam PF01386 Ribosomal L25p family 11 96 2.0E-22 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM1340 b924f43797d3b5e3be519322b4998203 218 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 11 184 2.3E-47 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM1340 b924f43797d3b5e3be519322b4998203 218 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 7 189 28.052 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 AM1340 b924f43797d3b5e3be519322b4998203 218 Gene3D G3DSA:2.170.120.20 102 197 2.7E-24 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal AM248 240bdd33753b51d9e60221c94f0ab759 497 Gene3D G3DSA:3.60.21.10 132 372 4.4E-11 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like AM248 240bdd33753b51d9e60221c94f0ab759 497 SUPERFAMILY SSF56300 119 394 8.39E-22 T 11-10-2018 AM248 240bdd33753b51d9e60221c94f0ab759 497 Pfam PF00149 Calcineurin-like phosphoesterase 119 347 1.3E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 Pfam PF00675 Insulinase (Peptidase family M16) 31 176 1.9E-37 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 Gene3D G3DSA:3.30.830.10 234 436 1.0E-55 T 11-10-2018 AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 Pfam PF05193 Peptidase M16 inactive domain 184 354 3.0E-40 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 SUPERFAMILY SSF63411 22 220 7.81E-54 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 Gene3D G3DSA:3.30.830.10 20 233 1.6E-63 T 11-10-2018 AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 SUPERFAMILY SSF63411 236 429 3.97E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM117 a898a1fd2dbfc3889e3e96f7b3640b6c 436 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 51 74 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM779 fe529ae9af89ece32c458e244dfe8017 530 Gene3D G3DSA:2.40.160.10 114 471 1.9E-9 T 11-10-2018 IPR023614 Porin domain superfamily AM779 fe529ae9af89ece32c458e244dfe8017 530 Pfam PF13609 Gram-negative porin 104 420 4.7E-9 T 11-10-2018 AM779 fe529ae9af89ece32c458e244dfe8017 530 SUPERFAMILY SSF56935 141 447 6.8E-9 T 11-10-2018 AM279 67329d4a25383f9719591a2b39fb7042 288 Pfam PF01734 Patatin-like phospholipase 9 168 4.3E-13 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 AM279 67329d4a25383f9719591a2b39fb7042 288 Gene3D G3DSA:3.40.1090.10 1 285 3.5E-50 T 11-10-2018 AM279 67329d4a25383f9719591a2b39fb7042 288 SUPERFAMILY SSF52151 1 278 1.91E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase AM233 6b3f3dd68c4fde270d34e35ed6c82760 92 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 7 61 7.7E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM233 6b3f3dd68c4fde270d34e35ed6c82760 92 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 6 60 11.918 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM233 6b3f3dd68c4fde270d34e35ed6c82760 92 Pfam PF01165 Ribosomal protein S21 8 59 3.0E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 828 1.0E-284 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 7 828 20.788 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 478 496 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 514 536 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 547 557 9.4E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Pfam PF09334 tRNA synthetases class I (M) 37 169 2.6E-19 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Gene3D G3DSA:1.10.730.10 13 760 1.1E-288 T 11-10-2018 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Gene3D G3DSA:3.40.50.620 31 556 1.1E-288 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Gene3D G3DSA:3.10.20.590 769 829 2.9E-13 T 11-10-2018 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 SUPERFAMILY SSF52374 6 643 3.34E-137 T 11-10-2018 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 SUPERFAMILY SSF50677 237 406 3.77E-42 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 51 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Gene3D G3DSA:3.90.740.10 225 405 1.1E-288 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Pfam PF08264 Anticodon-binding domain of tRNA 671 789 1.2E-17 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 SUPERFAMILY SSF47323 638 828 6.17E-31 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 409 561 1.7E-11 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 592 634 3.5E-10 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Gene3D G3DSA:3.10.330.110 557 603 1.1E-288 T 11-10-2018 AM446 d4e3dc5d66a8c0fc19877c8cb7e5a36f 829 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 395 1.2E-47 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AM001 a07af0ae32537a03fa3826917fe645fe 166 Gene3D G3DSA:3.40.50.7700 1 165 2.2E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AM001 a07af0ae32537a03fa3826917fe645fe 166 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 8 161 31.523 T 11-10-2018 IPR033747 Class I PurE AM001 a07af0ae32537a03fa3826917fe645fe 166 SUPERFAMILY SSF52255 7 161 1.11E-62 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 AM001 a07af0ae32537a03fa3826917fe645fe 166 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 8 158 4.1E-61 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM001 a07af0ae32537a03fa3826917fe645fe 166 SMART SM01001 6 157 3.4E-94 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM001 a07af0ae32537a03fa3826917fe645fe 166 PIRSF PIRSF001338 3 165 8.4E-66 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 AM001 a07af0ae32537a03fa3826917fe645fe 166 Pfam PF00731 AIR carboxylase 7 153 7.3E-62 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 AM669 8e8fe5b29123ac0101fe544d00525a12 201 Gene3D G3DSA:3.40.50.150 4 191 9.5E-60 T 11-10-2018 AM669 8e8fe5b29123ac0101fe544d00525a12 201 SUPERFAMILY SSF53335 7 186 1.45E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM669 8e8fe5b29123ac0101fe544d00525a12 201 PIRSF PIRSF005461 1 196 5.1E-66 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AM669 8e8fe5b29123ac0101fe544d00525a12 201 Pfam PF01728 FtsJ-like methyltransferase 8 184 1.7E-55 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AM669 8e8fe5b29123ac0101fe544d00525a12 201 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 1 185 25.344 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 233 374 1.7E-34 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 Gene3D G3DSA:3.40.50.720 44 240 9.5E-50 T 11-10-2018 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 Gene3D G3DSA:1.10.1040.10 242 388 8.3E-34 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 109 136 3.2E-27 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 293 310 3.2E-27 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 226 250 3.2E-27 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 186 206 3.2E-27 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 59 76 3.2E-27 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 251 275 3.2E-27 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 SUPERFAMILY SSF51735 56 233 5.1E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 56 210 2.8E-39 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 55 377 28.282 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 SUPERFAMILY SSF48179 233 386 2.89E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 PIRSF PIRSF000114 50 386 1.6E-85 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM985 cb7631cff8d0e3ea1e20e21dfb3022bf 389 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 241 262 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 AM904 401cdf4dab4b1185d450ed89e5bc2a4a 68 SUPERFAMILY SSF46561 5 63 1.57E-10 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM904 401cdf4dab4b1185d450ed89e5bc2a4a 68 Gene3D G3DSA:1.10.287.310 3 64 3.9E-9 T 11-10-2018 AM904 401cdf4dab4b1185d450ed89e5bc2a4a 68 Pfam PF00831 Ribosomal L29 protein 6 60 4.4E-10 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM904 401cdf4dab4b1185d450ed89e5bc2a4a 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 9.9E-8 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM904 401cdf4dab4b1185d450ed89e5bc2a4a 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 10.806 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM707 f01dd637dbe10644a351f2f1848aa544 160 Pfam PF12838 4Fe-4S dicluster domain 60 114 1.2E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM707 f01dd637dbe10644a351f2f1848aa544 160 SUPERFAMILY SSF54862 34 141 2.26E-26 T 11-10-2018 AM707 f01dd637dbe10644a351f2f1848aa544 160 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 17 138 9.1E-51 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM707 f01dd637dbe10644a351f2f1848aa544 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM707 f01dd637dbe10644a351f2f1848aa544 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 100 111 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM707 f01dd637dbe10644a351f2f1848aa544 160 Gene3D G3DSA:3.30.70.3270 34 157 2.1E-41 T 11-10-2018 AM707 f01dd637dbe10644a351f2f1848aa544 160 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 8 142 27.719 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM1316 dac44179b8006ebac55a6c94f663c3e0 229 SUPERFAMILY SSF54427 90 228 1.49E-33 T 11-10-2018 IPR032710 NTF2-like domain superfamily AM1316 dac44179b8006ebac55a6c94f663c3e0 229 PIRSF PIRSF003299 5 229 3.3E-98 T 11-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 AM1316 dac44179b8006ebac55a6c94f663c3e0 229 Gene3D G3DSA:3.10.450.230 88 229 5.3E-37 T 11-10-2018 AM1316 dac44179b8006ebac55a6c94f663c3e0 229 Pfam PF04335 VirB8 protein 20 227 1.5E-56 T 11-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 651 40.559 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 648 1.5E-292 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 SMART SM00487 8 423 1.2E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM1243 a2fa6346fe17d11f070674ae6299fb85 651 SUPERFAMILY SSF46600 616 649 3.53E-7 T 11-10-2018 IPR036876 UVR domain superfamily AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Gene3D G3DSA:3.40.50.300 413 594 1.1E-47 T 11-10-2018 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Pfam PF02151 UvrB/uvrC motif 619 648 2.3E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Pfam PF00271 Helicase conserved C-terminal domain 442 542 1.1E-17 T 11-10-2018 IPR001650 Helicase, C-terminal AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Gene3D G3DSA:3.40.50.300 270 412 7.7E-48 T 11-10-2018 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Pfam PF12344 Ultra-violet resistance protein B 550 591 1.9E-19 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain AM1243 a2fa6346fe17d11f070674ae6299fb85 651 SMART SM00490 458 544 1.8E-19 T 11-10-2018 IPR001650 Helicase, C-terminal AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Gene3D G3DSA:3.40.50.300 1 240 2.3E-76 T 11-10-2018 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Pfam PF04851 Type III restriction enzyme, res subunit 12 91 1.0E-7 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 SUPERFAMILY SSF52540 36 571 3.33E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1243 a2fa6346fe17d11f070674ae6299fb85 651 Gene3D G3DSA:4.10.860.10 602 650 9.7E-6 T 11-10-2018 AM1243 a2fa6346fe17d11f070674ae6299fb85 651 SUPERFAMILY SSF52540 2 411 1.03E-123 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM465 33a3bafafa722e9ee07098a865cb4725 1133 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 373 726 4.8E-11 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM465 33a3bafafa722e9ee07098a865cb4725 1133 Gene3D G3DSA:3.40.50.80 921 1047 2.7E-11 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM465 33a3bafafa722e9ee07098a865cb4725 1133 SUPERFAMILY SSF63380 820 920 4.54E-12 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel AM465 33a3bafafa722e9ee07098a865cb4725 1133 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 499 517 3.6E-7 T 11-10-2018 AM465 33a3bafafa722e9ee07098a865cb4725 1133 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 394 3.6E-7 T 11-10-2018 AM465 33a3bafafa722e9ee07098a865cb4725 1133 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 553 571 3.6E-7 T 11-10-2018 AM465 33a3bafafa722e9ee07098a865cb4725 1133 Gene3D G3DSA:2.40.30.10 818 919 5.9E-13 T 11-10-2018 AM465 33a3bafafa722e9ee07098a865cb4725 1133 SUPERFAMILY SSF51971 372 718 2.35E-20 T 11-10-2018 AM465 33a3bafafa722e9ee07098a865cb4725 1133 SUPERFAMILY SSF52343 916 1098 1.02E-15 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain AM465 33a3bafafa722e9ee07098a865cb4725 1133 Gene3D G3DSA:3.50.50.60 639 719 4.4E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 SMART SM00898 4 118 1.5E-32 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 SMART SM01232 132 221 1.5E-36 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 SUPERFAMILY SSF81624 4 141 7.46E-32 T 11-10-2018 IPR035937 MutM-like, N-terminal AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 SUPERFAMILY SSF57716 217 268 3.71E-14 T 11-10-2018 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 Gene3D G3DSA:3.20.190.10 3 132 6.2E-29 T 11-10-2018 IPR035937 MutM-like, N-terminal AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 218 3.2E-21 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 SUPERFAMILY SSF46946 133 220 3.4E-24 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 3 117 2.8E-28 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 Gene3D G3DSA:1.10.8.50 134 269 5.8E-41 T 11-10-2018 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 3 268 1.1E-73 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 AM771 630a83a5aea31d2d59941e6efd6e5dc0 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 268 1.6E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 AM401 39faa798ea8a9df9590d35d96fd743f3 455 Gene3D G3DSA:3.80.30.20 144 375 8.2E-83 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe AM401 39faa798ea8a9df9590d35d96fd743f3 455 Pfam PF04055 Radical SAM superfamily 149 322 5.5E-33 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 AM401 39faa798ea8a9df9590d35d96fd743f3 455 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 432 3.6E-142 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 AM401 39faa798ea8a9df9590d35d96fd743f3 455 Gene3D G3DSA:3.40.50.12160 4 134 5.2E-31 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily AM401 39faa798ea8a9df9590d35d96fd743f3 455 SUPERFAMILY SSF102114 119 368 1.44E-59 T 11-10-2018 AM401 39faa798ea8a9df9590d35d96fd743f3 455 SMART SM00729 145 364 1.8E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 AM401 39faa798ea8a9df9590d35d96fd743f3 455 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 443 68.595 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AM401 39faa798ea8a9df9590d35d96fd743f3 455 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 AM401 39faa798ea8a9df9590d35d96fd743f3 455 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 440 3.3E-140 T 11-10-2018 AM401 39faa798ea8a9df9590d35d96fd743f3 455 Pfam PF00919 Uncharacterized protein family UPF0004 6 101 9.4E-29 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 AM1016 5adfec7f73930998f19fc70616a1816e 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 3.4E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM1016 5adfec7f73930998f19fc70616a1816e 290 Gene3D G3DSA:1.10.10.10 126 240 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM1016 5adfec7f73930998f19fc70616a1816e 290 Gene3D G3DSA:3.40.50.2300 1 124 1.1E-31 T 11-10-2018 AM1016 5adfec7f73930998f19fc70616a1816e 290 SMART SM00448 1 115 2.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM1016 5adfec7f73930998f19fc70616a1816e 290 Pfam PF00072 Response regulator receiver domain 3 116 2.8E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM1016 5adfec7f73930998f19fc70616a1816e 290 SMART SM00862 148 225 1.3E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AM1016 5adfec7f73930998f19fc70616a1816e 290 SUPERFAMILY SSF52172 1 176 1.12E-30 T 11-10-2018 IPR011006 CheY-like superfamily AM243 808e440934786323d832d08a7abb1bd0 438 Gene3D G3DSA:3.90.190.20 291 429 1.4E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM243 808e440934786323d832d08a7abb1bd0 438 SUPERFAMILY SSF53623 86 283 6.54E-43 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM243 808e440934786323d832d08a7abb1bd0 438 Gene3D G3DSA:3.40.1190.10 84 285 2.9E-49 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM243 808e440934786323d832d08a7abb1bd0 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 1 426 26.19 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM243 808e440934786323d832d08a7abb1bd0 438 SUPERFAMILY SSF53244 285 426 6.87E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM243 808e440934786323d832d08a7abb1bd0 438 Pfam PF08245 Mur ligase middle domain 100 224 2.2E-20 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM243 808e440934786323d832d08a7abb1bd0 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 1 423 3.4E-97 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 AM243 808e440934786323d832d08a7abb1bd0 438 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 98 121 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 AM243 808e440934786323d832d08a7abb1bd0 438 Gene3D G3DSA:3.40.50.720 1 82 8.7E-6 T 11-10-2018 AM243 808e440934786323d832d08a7abb1bd0 438 SUPERFAMILY SSF51984 1 82 1.96E-5 T 11-10-2018 AM402 185e01d923e6a5dfdaf998fd40e5a8b5 880 Pfam PF13550 Putative phage tail protein 694 848 1.0E-24 T 11-10-2018 IPR032876 Tip attachment protein J AM402 185e01d923e6a5dfdaf998fd40e5a8b5 880 Pfam PF13547 GTA TIM-barrel-like domain 390 618 1.2E-40 T 11-10-2018 IPR025195 GTA TIM-barrel-like domain AM402 185e01d923e6a5dfdaf998fd40e5a8b5 880 SUPERFAMILY SSF51445 430 633 4.74E-7 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily AM069 55632389c7da8117f25d08774a37fc0c 346 Gene3D G3DSA:3.40.190.10 131 343 1.3E-120 T 11-10-2018 AM069 55632389c7da8117f25d08774a37fc0c 346 Gene3D G3DSA:3.40.190.10 33 309 1.3E-120 T 11-10-2018 AM069 55632389c7da8117f25d08774a37fc0c 346 PIRSF PIRSF002825 3 346 4.0E-85 T 11-10-2018 IPR026045 Ferric binding protein AM069 55632389c7da8117f25d08774a37fc0c 346 Pfam PF13343 Bacterial extracellular solute-binding protein 80 304 5.8E-20 T 11-10-2018 AM069 55632389c7da8117f25d08774a37fc0c 346 SUPERFAMILY SSF53850 30 346 4.73E-73 T 11-10-2018 AM1035 7be74012ea1d71f96ac9d802404e5109 150 Pfam PF04379 ApaG domain 39 123 1.4E-31 T 11-10-2018 IPR007474 ApaG domain AM1035 7be74012ea1d71f96ac9d802404e5109 150 Hamap MF_00791 Protein ApaG [apaG]. 21 150 28.216 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG AM1035 7be74012ea1d71f96ac9d802404e5109 150 Gene3D G3DSA:2.60.40.1470 23 149 3.2E-43 T 11-10-2018 IPR036767 ApaG domain superfamily AM1035 7be74012ea1d71f96ac9d802404e5109 150 SUPERFAMILY SSF110069 25 147 4.71E-44 T 11-10-2018 IPR036767 ApaG domain superfamily AM310 c5e0861223125892b6d46386131c15b3 405 Gene3D G3DSA:3.30.50.30 2 47 5.3E-19 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily AM310 c5e0861223125892b6d46386131c15b3 405 SMART SM00994 8 47 7.8E-21 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM310 c5e0861223125892b6d46386131c15b3 405 Pfam PF07724 AAA domain (Cdc48 subfamily) 105 300 4.9E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM310 c5e0861223125892b6d46386131c15b3 405 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 307 376 8.4E-12 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM310 c5e0861223125892b6d46386131c15b3 405 SUPERFAMILY SSF57716 9 44 1.85E-10 T 11-10-2018 AM310 c5e0861223125892b6d46386131c15b3 405 SMART SM00382 104 257 2.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AM310 c5e0861223125892b6d46386131c15b3 405 Pfam PF06689 ClpX C4-type zinc finger 10 46 6.0E-18 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AM310 c5e0861223125892b6d46386131c15b3 405 Gene3D G3DSA:3.40.50.300 56 305 9.0E-104 T 11-10-2018 AM310 c5e0861223125892b6d46386131c15b3 405 Gene3D G3DSA:1.10.8.60 306 403 9.0E-33 T 11-10-2018 AM310 c5e0861223125892b6d46386131c15b3 405 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 404 48.73 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM310 c5e0861223125892b6d46386131c15b3 405 SUPERFAMILY SSF52540 57 395 5.94E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM310 c5e0861223125892b6d46386131c15b3 405 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 395 1.2E-182 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AM310 c5e0861223125892b6d46386131c15b3 405 SMART SM01086 307 396 1.1E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM474 ee27135ea2aacbd239ea00a859f03ee3 296 SMART SM00363 14 74 3.3E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 Pfam PF00849 RNA pseudouridylate synthase 97 241 3.4E-33 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 Gene3D G3DSA:3.10.290.10 2 67 3.0E-9 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 Pfam PF01479 S4 domain 14 60 3.5E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 SUPERFAMILY SSF55120 89 294 1.06E-52 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 Gene3D G3DSA:3.30.2350.10 89 296 1.3E-57 T 11-10-2018 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM474 ee27135ea2aacbd239ea00a859f03ee3 296 SUPERFAMILY SSF55174 12 111 6.28E-8 T 11-10-2018 AM762 68f67897db5b415d7cba918884cf783f 292 Gene3D G3DSA:3.40.1500.10 8 292 6.2E-106 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 PIRSF PIRSF000166 4 292 5.6E-114 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 Pfam PF01218 Coproporphyrinogen III oxidase 26 292 1.5E-96 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 PRINTS PR00073 Coprogen oxidase signature 177 206 3.6E-45 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 PRINTS PR00073 Coprogen oxidase signature 52 68 3.6E-45 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 PRINTS PR00073 Coprogen oxidase signature 140 162 3.6E-45 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 PRINTS PR00073 Coprogen oxidase signature 249 276 3.6E-45 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 PRINTS PR00073 Coprogen oxidase signature 277 292 3.6E-45 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM762 68f67897db5b415d7cba918884cf783f 292 SUPERFAMILY SSF102886 17 292 7.59E-112 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 AM349 44336fa8c1606b3fc50a8c7732fd73f4 170 SUPERFAMILY SSF47240 4 140 2.72E-16 T 11-10-2018 IPR009078 Ferritin-like superfamily AM349 44336fa8c1606b3fc50a8c7732fd73f4 170 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 6 168 4.4E-61 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AM349 44336fa8c1606b3fc50a8c7732fd73f4 170 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 170 23.754 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 AM763 b240f300b74b9c168014ae6be3f4777e 326 Pfam PF00696 Amino acid kinase family 50 294 4.7E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM763 b240f300b74b9c168014ae6be3f4777e 326 Gene3D G3DSA:3.40.1160.10 30 322 9.3E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM763 b240f300b74b9c168014ae6be3f4777e 326 TIGRFAM TIGR00761 argB: acetylglutamate kinase 50 295 4.6E-52 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM763 b240f300b74b9c168014ae6be3f4777e 326 SUPERFAMILY SSF53633 29 318 2.65E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM763 b240f300b74b9c168014ae6be3f4777e 326 PIRSF PIRSF000728 34 319 6.4E-81 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 AM1138 8621b0a37302440a52ce4a80a22601d0 187 Gene3D G3DSA:1.10.260.40 24 96 2.0E-18 T 11-10-2018 AM1138 8621b0a37302440a52ce4a80a22601d0 187 SMART SM00530 33 88 8.0E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM1138 8621b0a37302440a52ce4a80a22601d0 187 SUPERFAMILY SSF47413 21 99 1.29E-24 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM1138 8621b0a37302440a52ce4a80a22601d0 187 Pfam PF01381 Helix-turn-helix 34 87 7.4E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM475 880ad402c4836a2de1a02f0a339fc85e 455 Gene3D G3DSA:3.30.70.270 290 454 1.3E-56 T 11-10-2018 AM475 880ad402c4836a2de1a02f0a339fc85e 455 SUPERFAMILY SSF52172 2 132 6.4E-39 T 11-10-2018 IPR011006 CheY-like superfamily AM475 880ad402c4836a2de1a02f0a339fc85e 455 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 449 2.3E-50 T 11-10-2018 IPR000160 GGDEF domain AM475 880ad402c4836a2de1a02f0a339fc85e 455 Pfam PF00072 Response regulator receiver domain 5 117 1.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM475 880ad402c4836a2de1a02f0a339fc85e 455 Pfam PF00072 Response regulator receiver domain 159 270 2.1E-10 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM475 880ad402c4836a2de1a02f0a339fc85e 455 SMART SM00448 157 270 5.8E-7 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM475 880ad402c4836a2de1a02f0a339fc85e 455 SMART SM00448 3 117 6.0E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM475 880ad402c4836a2de1a02f0a339fc85e 455 SMART SM00267 283 453 1.4E-51 T 11-10-2018 IPR000160 GGDEF domain AM475 880ad402c4836a2de1a02f0a339fc85e 455 SUPERFAMILY SSF55073 299 447 1.33E-45 T 11-10-2018 IPR029787 Nucleotide cyclase AM475 880ad402c4836a2de1a02f0a339fc85e 455 Gene3D G3DSA:3.40.50.12740 1 289 1.2E-82 T 11-10-2018 AM475 880ad402c4836a2de1a02f0a339fc85e 455 SUPERFAMILY SSF52172 149 289 1.22E-16 T 11-10-2018 IPR011006 CheY-like superfamily AM475 880ad402c4836a2de1a02f0a339fc85e 455 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 447 9.9E-45 T 11-10-2018 IPR000160 GGDEF domain AM171 45b1760880b38b16a55d46ede8f49c5f 393 Pfam PF07690 Major Facilitator Superfamily 13 355 3.6E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM171 45b1760880b38b16a55d46ede8f49c5f 393 Gene3D G3DSA:1.20.1720.10 7 387 4.1E-66 T 11-10-2018 AM171 45b1760880b38b16a55d46ede8f49c5f 393 SUPERFAMILY SSF103473 6 389 1.1E-52 T 11-10-2018 IPR036259 MFS transporter superfamily AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 SUPERFAMILY SSF52833 10 167 1.23E-53 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 19 165 1.9E-57 T 11-10-2018 AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 122 140 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 19 165 1.7E-56 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 Gene3D G3DSA:3.40.30.10 83 169 1.4E-30 T 11-10-2018 AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 Gene3D G3DSA:1.10.10.1590 8 82 2.5E-24 T 11-10-2018 AM624 020a2671cdd0f4f7d3900fa2f1054b51 169 PIRSF PIRSF000216 1 169 3.6E-68 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM207 e8fc094b2619163a0279f5fc1331292d 466 Gene3D G3DSA:3.40.50.300 138 324 3.0E-41 T 11-10-2018 AM207 e8fc094b2619163a0279f5fc1331292d 466 SUPERFAMILY SSF52172 14 194 1.57E-38 T 11-10-2018 IPR011006 CheY-like superfamily AM207 e8fc094b2619163a0279f5fc1331292d 466 SMART SM00448 13 126 5.7E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM207 e8fc094b2619163a0279f5fc1331292d 466 Gene3D G3DSA:3.40.50.2300 14 133 1.0E-31 T 11-10-2018 AM207 e8fc094b2619163a0279f5fc1331292d 466 Gene3D G3DSA:1.10.8.60 326 404 1.7E-17 T 11-10-2018 AM207 e8fc094b2619163a0279f5fc1331292d 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 366 375 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site AM207 e8fc094b2619163a0279f5fc1331292d 466 SMART SM00382 171 316 9.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AM207 e8fc094b2619163a0279f5fc1331292d 466 SUPERFAMILY SSF52540 150 397 1.83E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM207 e8fc094b2619163a0279f5fc1331292d 466 Gene3D G3DSA:1.10.10.60 410 464 1.8E-14 T 11-10-2018 AM207 e8fc094b2619163a0279f5fc1331292d 466 Pfam PF00072 Response regulator receiver domain 15 126 2.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 AM207 e8fc094b2619163a0279f5fc1331292d 466 SUPERFAMILY SSF46689 366 463 4.93E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 AM207 e8fc094b2619163a0279f5fc1331292d 466 Pfam PF02954 Bacterial regulatory protein, Fis family 421 460 1.9E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 AM207 e8fc094b2619163a0279f5fc1331292d 466 Pfam PF00158 Sigma-54 interaction domain 151 319 4.1E-37 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 AM964 4590750e8b351c6668ad1ea835d6b0b8 321 PIRSF PIRSF004532 2 313 1.7E-103 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM964 4590750e8b351c6668ad1ea835d6b0b8 321 Gene3D G3DSA:3.40.190.90 122 282 6.1E-100 T 11-10-2018 AM964 4590750e8b351c6668ad1ea835d6b0b8 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 6 307 6.1E-81 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM964 4590750e8b351c6668ad1ea835d6b0b8 321 Gene3D G3DSA:3.30.540.10 8 304 6.1E-100 T 11-10-2018 AM964 4590750e8b351c6668ad1ea835d6b0b8 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 6 305 1.1E-107 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 AM964 4590750e8b351c6668ad1ea835d6b0b8 321 SUPERFAMILY SSF56655 6 309 2.14E-80 T 11-10-2018 AM708 36d9de5d143e3be0469992c873c9297c 239 Pfam PF00717 Peptidase S24-like 38 126 3.5E-20 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C AM708 36d9de5d143e3be0469992c873c9297c 239 Gene3D G3DSA:2.170.230.10 113 174 6.7E-55 T 11-10-2018 AM708 36d9de5d143e3be0469992c873c9297c 239 ProSitePatterns PS00760 Signal peptidases I lysine active site. 104 116 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 AM708 36d9de5d143e3be0469992c873c9297c 239 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 17 218 1.2E-44 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM708 36d9de5d143e3be0469992c873c9297c 239 Gene3D G3DSA:2.10.109.10 30 218 6.7E-55 T 11-10-2018 AM708 36d9de5d143e3be0469992c873c9297c 239 SUPERFAMILY SSF51306 30 237 1.18E-59 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AM708 36d9de5d143e3be0469992c873c9297c 239 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 175 194 2.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM708 36d9de5d143e3be0469992c873c9297c 239 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 32 48 2.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM708 36d9de5d143e3be0469992c873c9297c 239 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 102 114 2.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AM708 36d9de5d143e3be0469992c873c9297c 239 ProSitePatterns PS00761 Signal peptidases I signature 3. 180 193 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 AM1112 21d4a60cf857dd2eeaac1e8f56a54247 80 Pfam PF00137 ATP synthase subunit C 14 75 2.2E-11 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AM1112 21d4a60cf857dd2eeaac1e8f56a54247 80 SUPERFAMILY SSF81333 5 77 5.75E-16 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily AM1112 21d4a60cf857dd2eeaac1e8f56a54247 80 Gene3D G3DSA:1.20.20.10 7 79 1.4E-19 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1112 21d4a60cf857dd2eeaac1e8f56a54247 80 PRINTS PR00124 ATP synthase C subunit signature 34 49 4.2E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1112 21d4a60cf857dd2eeaac1e8f56a54247 80 PRINTS PR00124 ATP synthase C subunit signature 13 32 4.2E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1112 21d4a60cf857dd2eeaac1e8f56a54247 80 PRINTS PR00124 ATP synthase C subunit signature 51 76 4.2E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM041 11ec6a9f3609cd1617bf6ca7380c803a 401 SUPERFAMILY SSF54534 177 257 1.37E-6 T 11-10-2018 AM041 11ec6a9f3609cd1617bf6ca7380c803a 401 Gene3D G3DSA:3.10.50.40 166 256 2.1E-18 T 11-10-2018 AM041 11ec6a9f3609cd1617bf6ca7380c803a 401 SUPERFAMILY SSF109998 27 179 3.1E-20 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AM041 11ec6a9f3609cd1617bf6ca7380c803a 401 Pfam PF13624 SurA N-terminal domain 29 136 5.2E-7 T 11-10-2018 AM041 11ec6a9f3609cd1617bf6ca7380c803a 401 Gene3D G3DSA:1.10.4030.30 26 257 2.1E-18 T 11-10-2018 AM882 6af20ba170f449a60c860c987eab442c 439 PRINTS PR00175 Sodium/alanine symporter signature 345 367 1.8E-15 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM882 6af20ba170f449a60c860c987eab442c 439 PRINTS PR00175 Sodium/alanine symporter signature 197 216 1.8E-15 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM882 6af20ba170f449a60c860c987eab442c 439 PRINTS PR00175 Sodium/alanine symporter signature 169 187 1.8E-15 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM882 6af20ba170f449a60c860c987eab442c 439 PRINTS PR00175 Sodium/alanine symporter signature 405 425 1.8E-15 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM882 6af20ba170f449a60c860c987eab442c 439 PRINTS PR00175 Sodium/alanine symporter signature 79 101 1.8E-15 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM882 6af20ba170f449a60c860c987eab442c 439 Pfam PF01235 Sodium:alanine symporter family 47 427 5.3E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AM1200 3e16b15bfb976a6fd0cdd849050f13ab 126 SUPERFAMILY SSF52980 15 124 1.61E-19 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 AM1200 3e16b15bfb976a6fd0cdd849050f13ab 126 Gene3D G3DSA:3.40.1350.10 18 126 1.0E-20 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 AM1200 3e16b15bfb976a6fd0cdd849050f13ab 126 Pfam PF02021 Uncharacterised protein family UPF0102 24 103 7.2E-13 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 158 6.2E-32 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 SUPERFAMILY SSF53098 2 159 1.1E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM1299 d67e5e26e87aa08fc3f7956887707a21 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 3.0E-22 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 141 153 3.0E-22 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 3.0E-22 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 3.0E-22 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 3.0E-22 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 153 5.5E-39 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 156 32.661 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AM1299 d67e5e26e87aa08fc3f7956887707a21 165 Gene3D G3DSA:3.30.420.10 2 162 3.4E-38 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM896 008143e568224542b8a6fe94e34010cf 181 PRINTS PR00059 Ribosomal protein L6 signature 74 99 1.4E-19 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM896 008143e568224542b8a6fe94e34010cf 181 PRINTS PR00059 Ribosomal protein L6 signature 102 118 1.4E-19 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM896 008143e568224542b8a6fe94e34010cf 181 PRINTS PR00059 Ribosomal protein L6 signature 144 165 1.4E-19 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM896 008143e568224542b8a6fe94e34010cf 181 PIRSF PIRSF002162 1 181 1.3E-36 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM896 008143e568224542b8a6fe94e34010cf 181 SUPERFAMILY SSF56053 86 178 1.87E-29 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM896 008143e568224542b8a6fe94e34010cf 181 Pfam PF00347 Ribosomal protein L6 94 165 2.4E-13 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM896 008143e568224542b8a6fe94e34010cf 181 Pfam PF00347 Ribosomal protein L6 11 85 1.5E-5 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM896 008143e568224542b8a6fe94e34010cf 181 Gene3D G3DSA:3.90.930.12 86 181 3.6E-30 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM896 008143e568224542b8a6fe94e34010cf 181 Gene3D G3DSA:3.90.930.12 1 85 2.5E-15 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM896 008143e568224542b8a6fe94e34010cf 181 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 178 6.2E-58 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM896 008143e568224542b8a6fe94e34010cf 181 SUPERFAMILY SSF56053 2 85 9.08E-13 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 Gene3D G3DSA:1.20.58.100 437 549 2.1E-38 T 11-10-2018 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 Gene3D G3DSA:4.10.80.40 550 599 5.6E-12 T 11-10-2018 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 PIRSF PIRSF000171 6 589 1.1E-43 T 11-10-2018 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 SUPERFAMILY SSF56425 245 363 4.34E-44 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 Gene3D G3DSA:3.50.50.60 16 421 3.3E-170 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM168 f566ff5c3338e5aede5b5fccf010fe46 599 SUPERFAMILY SSF51905 7 447 3.01E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM168 f566ff5c3338e5aede5b5fccf010fe46 599 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 13 599 2.1E-291 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 SUPERFAMILY SSF46977 457 599 4.06E-49 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 Pfam PF02910 Fumarate reductase flavoprotein C-term 465 599 3.0E-44 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 50 59 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 Pfam PF00890 FAD binding domain 16 410 2.7E-128 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 Gene3D G3DSA:3.90.700.10 255 358 3.3E-170 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM168 f566ff5c3338e5aede5b5fccf010fe46 599 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 16 599 2.8E-250 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 7 400 54.053 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 PIRSF PIRSF005572 8 389 8.0E-131 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 SUPERFAMILY SSF53383 9 396 1.32E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 Gene3D G3DSA:3.40.640.10 22 266 3.5E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 8 407 1.2E-200 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 Pfam PF00266 Aminotransferase class-V 11 372 3.7E-81 T 11-10-2018 IPR000192 Aminotransferase class V domain AM655 4cea1dc4be3cb6496a42fb5be8c33ff2 408 Gene3D G3DSA:3.90.1150.10 11 379 3.5E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM805 4594243bbb9c328d4e68d3a6002e331c 147 Pfam PF00692 dUTPase 16 146 1.9E-31 T 11-10-2018 IPR029054 dUTPase-like AM805 4594243bbb9c328d4e68d3a6002e331c 147 TIGRFAM TIGR00576 dut: dUTP diphosphatase 14 146 2.7E-53 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AM805 4594243bbb9c328d4e68d3a6002e331c 147 SUPERFAMILY SSF51283 4 146 4.32E-52 T 11-10-2018 IPR036157 dUTPase-like superfamily AM805 4594243bbb9c328d4e68d3a6002e331c 147 Gene3D G3DSA:2.70.40.10 1 147 1.4E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily AM805 4594243bbb9c328d4e68d3a6002e331c 147 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 2 147 33.405 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 AM111 b07a7cd2fa6f4e46110660a528550852 211 Gene3D G3DSA:3.40.50.300 1 201 2.0E-55 T 11-10-2018 AM111 b07a7cd2fa6f4e46110660a528550852 211 Hamap MF_00165 Thymidylate kinase [tmk]. 1 207 25.562 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM111 b07a7cd2fa6f4e46110660a528550852 211 SUPERFAMILY SSF52540 1 191 8.31E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM111 b07a7cd2fa6f4e46110660a528550852 211 Pfam PF02223 Thymidylate kinase 5 183 6.2E-37 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AM111 b07a7cd2fa6f4e46110660a528550852 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 183 1.8E-42 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM111 b07a7cd2fa6f4e46110660a528550852 211 ProSitePatterns PS01331 Thymidylate kinase signature. 92 104 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 AM913 a62edf8b5b2e64313ae3c77f091aa148 105 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.1E-35 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM913 a62edf8b5b2e64313ae3c77f091aa148 105 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.1E-9 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM913 a62edf8b5b2e64313ae3c77f091aa148 105 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.1E-9 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM913 a62edf8b5b2e64313ae3c77f091aa148 105 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.1E-9 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM913 a62edf8b5b2e64313ae3c77f091aa148 105 SMART SM01403 7 101 3.2E-41 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AM913 a62edf8b5b2e64313ae3c77f091aa148 105 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 22.545 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM913 a62edf8b5b2e64313ae3c77f091aa148 105 Pfam PF00338 Ribosomal protein S10p/S20e 8 101 2.4E-28 T 11-10-2018 IPR027486 Ribosomal protein S10 domain AM913 a62edf8b5b2e64313ae3c77f091aa148 105 Gene3D G3DSA:3.30.70.600 1 103 1.3E-30 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AM913 a62edf8b5b2e64313ae3c77f091aa148 105 SUPERFAMILY SSF54999 5 102 3.01E-31 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily AM424 3f41d1d4da76e6575898f2ac562f871f 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 16 179 4.3E-40 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM424 3f41d1d4da76e6575898f2ac562f871f 179 Hamap MF_00984 Single-stranded DNA-binding protein. 17 130 30.68 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 AM424 3f41d1d4da76e6575898f2ac562f871f 179 SUPERFAMILY SSF50249 16 179 4.46E-42 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM424 3f41d1d4da76e6575898f2ac562f871f 179 Gene3D G3DSA:2.40.50.140 13 130 2.3E-41 T 11-10-2018 AM424 3f41d1d4da76e6575898f2ac562f871f 179 Pfam PF00436 Single-strand binding protein family 17 117 4.4E-34 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 AM424 3f41d1d4da76e6575898f2ac562f871f 179 PIRSF PIRSF002070 13 170 2.1E-32 T 11-10-2018 AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 SUPERFAMILY SSF56042 458 675 2.24E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Pfam PF00586 AIR synthase related protein, N-terminal domain 324 444 7.3E-14 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Pfam PF00586 AIR synthase related protein, N-terminal domain 720 799 7.0E-4 T 11-10-2018 IPR016188 PurM-like, N-terminal domain AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 SUPERFAMILY SSF55326 248 446 2.41E-39 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Gene3D G3DSA:3.30.1330.10 634 829 5.7E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Gene3D G3DSA:3.30.1330.10 270 447 1.9E-44 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 240 1016 185.718 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Gene3D G3DSA:3.90.650.10 449 630 5.6E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Gene3D G3DSA:3.90.650.10 838 1007 5.9E-29 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 SUPERFAMILY SSF55326 647 833 5.1E-50 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Pfam PF02769 AIR synthase related protein, C-terminal domain 459 609 6.5E-21 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 Pfam PF02769 AIR synthase related protein, C-terminal domain 845 981 7.1E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain AM973 b07b14ca64f688e7b31453e8ef6e364f 1016 SUPERFAMILY SSF56042 841 987 8.67E-25 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 Gene3D G3DSA:3.40.50.300 10 174 1.4E-87 T 11-10-2018 AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 SUPERFAMILY SSF48019 241 358 4.76E-8 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 SMART SM00382 34 176 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 SUPERFAMILY SSF52540 32 227 2.27E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 349 1.1E-110 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 Gene3D G3DSA:1.10.8.60 6 236 1.4E-87 T 11-10-2018 AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 Pfam PF13177 DNA polymerase III, delta subunit 18 174 1.4E-32 T 11-10-2018 AM1280 fb444918f981c07917a8c8bdc1f9aed2 474 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 231 361 1.2E-18 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 AM1214 cd03695507ac219234a1cfac91004b02 864 SMART SM00475 16 271 3.2E-111 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AM1214 cd03695507ac219234a1cfac91004b02 864 SUPERFAMILY SSF56672 455 858 2.45E-137 T 11-10-2018 AM1214 cd03695507ac219234a1cfac91004b02 864 Gene3D G3DSA:1.10.150.20 646 787 3.8E-102 T 11-10-2018 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 615 630 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 689 714 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 592 614 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 637 660 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 667 680 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 726 737 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 748 759 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 PRINTS PR00868 DNA-polymerase family A (pol I) signature 780 796 1.4E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 Gene3D G3DSA:1.10.150.20 183 256 2.9E-89 T 11-10-2018 AM1214 cd03695507ac219234a1cfac91004b02 864 Pfam PF00476 DNA polymerase family A 485 856 5.6E-139 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 Gene3D G3DSA:3.30.420.10 319 476 3.9E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM1214 cd03695507ac219234a1cfac91004b02 864 Gene3D G3DSA:1.20.1060.10 478 595 5.3E-34 T 11-10-2018 AM1214 cd03695507ac219234a1cfac91004b02 864 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 18 179 8.5E-47 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AM1214 cd03695507ac219234a1cfac91004b02 864 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 180 274 1.9E-27 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 AM1214 cd03695507ac219234a1cfac91004b02 864 TIGRFAM TIGR00593 pola: DNA polymerase I 19 858 1.9E-264 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 SMART SM00279 182 217 2.3E-12 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AM1214 cd03695507ac219234a1cfac91004b02 864 Gene3D G3DSA:3.30.70.370 600 855 3.8E-102 T 11-10-2018 AM1214 cd03695507ac219234a1cfac91004b02 864 Gene3D G3DSA:3.40.50.1010 19 287 2.9E-89 T 11-10-2018 AM1214 cd03695507ac219234a1cfac91004b02 864 SMART SM00482 623 823 1.2E-94 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM1214 cd03695507ac219234a1cfac91004b02 864 SUPERFAMILY SSF88723 15 179 6.62E-50 T 11-10-2018 IPR029060 PIN-like domain superfamily AM1214 cd03695507ac219234a1cfac91004b02 864 SUPERFAMILY SSF47807 180 295 3.89E-29 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily AM1214 cd03695507ac219234a1cfac91004b02 864 SUPERFAMILY SSF53098 341 452 4.4E-10 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM1214 cd03695507ac219234a1cfac91004b02 864 ProSitePatterns PS00447 DNA polymerase family A signature. 689 708 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM449 6a1eba5126a9a072ce519c199aca4c7f 140 Gene3D G3DSA:2.40.50.140 29 133 4.7E-32 T 11-10-2018 AM449 6a1eba5126a9a072ce519c199aca4c7f 140 SUPERFAMILY SSF82093 29 130 5.75E-32 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 AM449 6a1eba5126a9a072ce519c199aca4c7f 140 Pfam PF03100 CcmE 3 128 5.3E-37 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AM449 6a1eba5126a9a072ce519c199aca4c7f 140 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 140 28.276 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 AM1129 e61ba53a7366aa4aa9028bd029387394 305 Gene3D G3DSA:3.40.50.300 103 292 1.5E-100 T 11-10-2018 AM1129 e61ba53a7366aa4aa9028bd029387394 305 SMART SM00962 103 304 9.6E-111 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM1129 e61ba53a7366aa4aa9028bd029387394 305 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 8.8E-74 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM1129 e61ba53a7366aa4aa9028bd029387394 305 SUPERFAMILY SSF52540 101 303 1.31E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1129 e61ba53a7366aa4aa9028bd029387394 305 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 35 302 2.3E-92 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM1129 e61ba53a7366aa4aa9028bd029387394 305 Gene3D G3DSA:1.20.120.140 10 302 1.5E-100 T 11-10-2018 AM1129 e61ba53a7366aa4aa9028bd029387394 305 SMART SM00963 11 90 0.0026 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 AM1129 e61ba53a7366aa4aa9028bd029387394 305 SMART SM00382 102 239 5.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AM1129 e61ba53a7366aa4aa9028bd029387394 305 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 35 304 52.693 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AM1129 e61ba53a7366aa4aa9028bd029387394 305 SUPERFAMILY SSF47364 6 70 1.79E-9 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 AM1022 74a516ba85fdc2d40772b9cbce96ec63 153 Pfam PF00380 Ribosomal protein S9/S16 33 153 5.6E-41 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AM1022 74a516ba85fdc2d40772b9cbce96ec63 153 Gene3D G3DSA:3.30.230.10 26 153 3.8E-45 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM1022 74a516ba85fdc2d40772b9cbce96ec63 153 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 24 153 28.885 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid AM1022 74a516ba85fdc2d40772b9cbce96ec63 153 SUPERFAMILY SSF54211 28 153 7.97E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM1022 74a516ba85fdc2d40772b9cbce96ec63 153 ProSitePatterns PS00360 Ribosomal protein S9 signature. 92 110 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AM520 58bae7fca993d2044ce2399686a865a9 434 SUPERFAMILY SSF118215 42 412 2.35E-37 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM520 58bae7fca993d2044ce2399686a865a9 434 Gene3D G3DSA:1.10.3860.10 27 427 7.8E-21 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM520 58bae7fca993d2044ce2399686a865a9 434 Pfam PF00375 Sodium:dicarboxylate symporter family 43 412 9.9E-29 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM309 b0d6569b79d3683387c09c02b44f142b 215 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 129 142 - T 11-10-2018 IPR033135 ClpP, histidine active site AM309 b0d6569b79d3683387c09c02b44f142b 215 PRINTS PR00127 Clp protease catalytic subunit P signature 107 124 4.4E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 PRINTS PR00127 Clp protease catalytic subunit P signature 128 147 4.4E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 PRINTS PR00127 Clp protease catalytic subunit P signature 36 51 4.4E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 PRINTS PR00127 Clp protease catalytic subunit P signature 76 96 4.4E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 PRINTS PR00127 Clp protease catalytic subunit P signature 185 204 4.4E-50 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 20 210 42.671 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 107 118 - T 11-10-2018 IPR018215 ClpP, Ser active site AM309 b0d6569b79d3683387c09c02b44f142b 215 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 18 209 1.7E-99 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AM309 b0d6569b79d3683387c09c02b44f142b 215 Gene3D G3DSA:3.90.226.10 12 211 1.2E-83 T 11-10-2018 AM309 b0d6569b79d3683387c09c02b44f142b 215 Pfam PF00574 Clp protease 29 209 2.8E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AM309 b0d6569b79d3683387c09c02b44f142b 215 SUPERFAMILY SSF52096 27 210 1.39E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM453 a5c35a5763da1fc9d968d02ffc08ba63 175 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 7 166 40.758 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM453 a5c35a5763da1fc9d968d02ffc08ba63 175 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 133 149 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM453 a5c35a5763da1fc9d968d02ffc08ba63 175 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 52 159 3.4E-24 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM453 a5c35a5763da1fc9d968d02ffc08ba63 175 SUPERFAMILY SSF56770 29 168 2.62E-65 T 11-10-2018 AM453 a5c35a5763da1fc9d968d02ffc08ba63 175 Gene3D G3DSA:3.40.50.12280 5 174 2.5E-77 T 11-10-2018 AM453 a5c35a5763da1fc9d968d02ffc08ba63 175 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 31 166 2.2E-76 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM258 242702374e03ac5fdbf0192e6dff2269 147 Gene3D G3DSA:1.10.10.250 81 147 2.1E-23 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AM258 242702374e03ac5fdbf0192e6dff2269 147 SMART SM00649 10 146 1.4E-51 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM258 242702374e03ac5fdbf0192e6dff2269 147 SUPERFAMILY SSF46906 74 146 1.57E-20 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily AM258 242702374e03ac5fdbf0192e6dff2269 147 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 7 146 2.0E-45 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM258 242702374e03ac5fdbf0192e6dff2269 147 SUPERFAMILY SSF54747 7 76 3.79E-17 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AM258 242702374e03ac5fdbf0192e6dff2269 147 Pfam PF00298 Ribosomal protein L11, RNA binding domain 80 145 9.9E-21 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AM258 242702374e03ac5fdbf0192e6dff2269 147 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 147 24.523 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AM258 242702374e03ac5fdbf0192e6dff2269 147 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 72 2.5E-18 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal AM258 242702374e03ac5fdbf0192e6dff2269 147 Gene3D G3DSA:3.30.1550.10 4 79 1.0E-21 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily AM901 1d224fdbd7b8501734db257bc71831a7 119 ProSitePatterns PS00049 Ribosomal protein L14 signature. 58 84 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM901 1d224fdbd7b8501734db257bc71831a7 119 Gene3D G3DSA:2.40.150.20 1 119 7.2E-41 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AM901 1d224fdbd7b8501734db257bc71831a7 119 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 119 24.101 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM901 1d224fdbd7b8501734db257bc71831a7 119 SMART SM01374 1 119 4.3E-56 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM901 1d224fdbd7b8501734db257bc71831a7 119 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 119 3.4E-41 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AM901 1d224fdbd7b8501734db257bc71831a7 119 SUPERFAMILY SSF50193 1 118 9.03E-40 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 AM901 1d224fdbd7b8501734db257bc71831a7 119 Pfam PF00238 Ribosomal protein L14p/L23e 1 119 1.2E-40 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AM1328 dc01a8013a6695ea8c3082d567cf3895 222 Pfam PF13717 zinc-ribbon domain 13 48 1.4E-15 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative AM1328 dc01a8013a6695ea8c3082d567cf3895 222 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 13 47 2.0E-14 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative AM106 5ad93cda81f69c3a6d3911a433f3977e 254 Pfam PF01513 ATP-NAD kinase 28 206 1.4E-17 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM106 5ad93cda81f69c3a6d3911a433f3977e 254 SUPERFAMILY SSF111331 24 241 1.96E-51 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily AM106 5ad93cda81f69c3a6d3911a433f3977e 254 Gene3D G3DSA:2.60.200.30 103 229 5.0E-25 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 AM106 5ad93cda81f69c3a6d3911a433f3977e 254 Gene3D G3DSA:3.40.50.10330 14 102 2.1E-9 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 AM807 b275d3e597aad65072d89994810a6db4 463 SUPERFAMILY SSF63418 10 96 6.41E-21 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AM807 b275d3e597aad65072d89994810a6db4 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 328 378 1.3E-6 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM807 b275d3e597aad65072d89994810a6db4 463 Pfam PF01225 Mur ligase family, catalytic domain 26 93 7.0E-9 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 AM807 b275d3e597aad65072d89994810a6db4 463 Gene3D G3DSA:3.40.1190.10 83 311 6.9E-58 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM807 b275d3e597aad65072d89994810a6db4 463 Gene3D G3DSA:3.90.190.20 319 462 1.1E-33 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM807 b275d3e597aad65072d89994810a6db4 463 SUPERFAMILY SSF53244 327 455 6.64E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM807 b275d3e597aad65072d89994810a6db4 463 Gene3D G3DSA:3.40.1390.10 3 78 1.3E-20 T 11-10-2018 AM807 b275d3e597aad65072d89994810a6db4 463 Pfam PF08245 Mur ligase middle domain 107 292 2.8E-40 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM807 b275d3e597aad65072d89994810a6db4 463 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 14 456 31.139 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM807 b275d3e597aad65072d89994810a6db4 463 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 455 1.0E-112 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM807 b275d3e597aad65072d89994810a6db4 463 SUPERFAMILY SSF53623 102 311 9.81E-45 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM1079 1506456b183cee80fe6067b4ccbe179c 444 Gene3D G3DSA:3.30.830.10 252 437 1.4E-31 T 11-10-2018 AM1079 1506456b183cee80fe6067b4ccbe179c 444 Pfam PF05193 Peptidase M16 inactive domain 194 368 1.1E-18 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AM1079 1506456b183cee80fe6067b4ccbe179c 444 Gene3D G3DSA:3.30.830.10 34 242 3.5E-36 T 11-10-2018 AM1079 1506456b183cee80fe6067b4ccbe179c 444 Pfam PF00675 Insulinase (Peptidase family M16) 49 166 2.6E-6 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AM1079 1506456b183cee80fe6067b4ccbe179c 444 SUPERFAMILY SSF63411 36 241 1.05E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM1079 1506456b183cee80fe6067b4ccbe179c 444 SUPERFAMILY SSF63411 258 433 2.33E-29 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM1070 d49ac8244daafa242ec5229f7fafaf15 207 PIRSF PIRSF005413 1 193 5.9E-66 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1070 d49ac8244daafa242ec5229f7fafaf15 207 Gene3D G3DSA:2.60.370.10 53 193 1.6E-47 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1070 d49ac8244daafa242ec5229f7fafaf15 207 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 3 182 33.972 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1070 d49ac8244daafa242ec5229f7fafaf15 207 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 29 174 2.8E-51 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1070 d49ac8244daafa242ec5229f7fafaf15 207 SUPERFAMILY SSF110111 59 178 1.16E-43 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1100 9302e9b9b6170aef2320ebaf023ecdef 180 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.7E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM1100 9302e9b9b6170aef2320ebaf023ecdef 180 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 176 3.0E-45 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM1100 9302e9b9b6170aef2320ebaf023ecdef 180 PIRSF PIRSF000847 1 179 3.1E-42 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM1100 9302e9b9b6170aef2320ebaf023ecdef 180 Gene3D G3DSA:1.20.120.1760 1 177 3.1E-14 T 11-10-2018 AM1100 9302e9b9b6170aef2320ebaf023ecdef 180 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM502 7cbd4c5cf52da6ea305837797dff3429 812 SUPERFAMILY SSF56712 2 607 3.4E-188 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain AM502 7cbd4c5cf52da6ea305837797dff3429 812 SMART SM00436 108 196 4.0E-45 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Gene3D G3DSA:3.40.50.140 1 138 5.9E-47 T 11-10-2018 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 598 631 3.8E-11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 728 53.358 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 3.8E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 3.8E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 479 493 3.8E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 3.8E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 3.8E-35 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 SMART SM00493 1 102 1.3E-25 T 11-10-2018 IPR006171 TOPRIM domain AM502 7cbd4c5cf52da6ea305837797dff3429 812 Gene3D G3DSA:2.70.20.10 188 463 1.2E-165 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Gene3D G3DSA:1.10.290.10 258 393 1.2E-165 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 AM502 7cbd4c5cf52da6ea305837797dff3429 812 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 632 8.7E-244 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 SUPERFAMILY SSF57783 595 634 2.04E-6 T 11-10-2018 AM502 7cbd4c5cf52da6ea305837797dff3429 812 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 287 309 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Pfam PF01131 DNA topoisomerase 132 553 3.8E-129 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Pfam PF13368 Topoisomerase C-terminal repeat 653 701 5.4E-6 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat AM502 7cbd4c5cf52da6ea305837797dff3429 812 Pfam PF13368 Topoisomerase C-terminal repeat 767 812 6.7E-11 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat AM502 7cbd4c5cf52da6ea305837797dff3429 812 Pfam PF13368 Topoisomerase C-terminal repeat 708 759 1.1E-11 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat AM502 7cbd4c5cf52da6ea305837797dff3429 812 Gene3D G3DSA:1.10.460.10 139 556 1.2E-165 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AM502 7cbd4c5cf52da6ea305837797dff3429 812 Pfam PF01751 Toprim domain 3 117 6.8E-25 T 11-10-2018 IPR006171 TOPRIM domain AM502 7cbd4c5cf52da6ea305837797dff3429 812 SMART SM00437 250 516 1.4E-116 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 68 78 5.0E-18 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 115 123 5.0E-18 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 5.0E-18 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 11 33 5.0E-18 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 283 301 5.0E-18 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 5.6E-13 T 11-10-2018 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 5.6E-13 T 11-10-2018 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 295 5.6E-13 T 11-10-2018 AM617 2490497b5dfababaa6e38ded691f5a13 340 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.6E-13 T 11-10-2018 AM617 2490497b5dfababaa6e38ded691f5a13 340 Gene3D G3DSA:3.50.50.60 11 315 1.6E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM617 2490497b5dfababaa6e38ded691f5a13 340 Hamap MF_01685 Ferredoxin--NADP reductase. 9 336 39.78 T 11-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 AM617 2490497b5dfababaa6e38ded691f5a13 340 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 304 1.8E-20 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM617 2490497b5dfababaa6e38ded691f5a13 340 SUPERFAMILY SSF51905 11 315 1.51E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM617 2490497b5dfababaa6e38ded691f5a13 340 Gene3D G3DSA:3.50.50.60 130 253 1.6E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 Pfam PF02875 Mur ligase family, glutamate ligase domain 320 399 2.5E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 Pfam PF08245 Mur ligase middle domain 97 300 2.0E-45 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 14 466 6.0E-117 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 Gene3D G3DSA:3.90.190.20 326 471 4.3E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 466 27.601 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 SUPERFAMILY SSF63418 14 87 7.19E-10 T 11-10-2018 IPR035911 MurE/MurF, N-terminal AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 SUPERFAMILY SSF53623 89 311 1.37E-58 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 SUPERFAMILY SSF53244 320 469 3.51E-37 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 Gene3D G3DSA:3.40.1190.10 90 323 2.1E-58 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM282 1cf8e36f875e8b8deb061cbc2cd8895d 472 Gene3D G3DSA:3.40.1390.10 3 88 7.8E-8 T 11-10-2018 AM501 944a712e13fd923e11f92029b5f173e0 469 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 208 461 1.3E-45 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM501 944a712e13fd923e11f92029b5f173e0 469 Pfam PF03853 YjeF-related protein N-terminus 26 170 2.2E-31 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM501 944a712e13fd923e11f92029b5f173e0 469 PIRSF PIRSF017184 86 468 4.1E-80 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AM501 944a712e13fd923e11f92029b5f173e0 469 PIRSF PIRSF017184 18 89 9.3E-10 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AM501 944a712e13fd923e11f92029b5f173e0 469 SUPERFAMILY SSF64153 9 223 4.84E-52 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AM501 944a712e13fd923e11f92029b5f173e0 469 SUPERFAMILY SSF53613 199 461 5.51E-55 T 11-10-2018 IPR029056 Ribokinase-like AM501 944a712e13fd923e11f92029b5f173e0 469 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 202 466 16.529 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM501 944a712e13fd923e11f92029b5f173e0 469 Gene3D G3DSA:3.40.50.10260 14 196 3.4E-49 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 AM501 944a712e13fd923e11f92029b5f173e0 469 Gene3D G3DSA:3.40.1190.20 202 466 1.0E-59 T 11-10-2018 IPR029056 Ribokinase-like AM501 944a712e13fd923e11f92029b5f173e0 469 Pfam PF01256 Carbohydrate kinase 235 444 4.0E-42 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 AM501 944a712e13fd923e11f92029b5f173e0 469 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 6 192 22.193 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 Gene3D G3DSA:1.10.40.30 354 432 9.5E-22 T 11-10-2018 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 Gene3D G3DSA:1.20.200.10 98 353 1.8E-83 T 11-10-2018 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 SMART SM00998 354 433 1.4E-25 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 Pfam PF00206 Lyase 12 289 2.2E-45 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 Pfam PF10397 Adenylosuccinate lyase C-terminus 355 430 2.2E-19 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 SUPERFAMILY SSF48557 7 432 1.29E-116 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 ProSitePatterns PS00163 Fumarate lyases signature. 266 275 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 Gene3D G3DSA:1.10.275.10 3 97 5.9E-27 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 6 431 7.4E-137 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00145 Argininosuccinate lyase family signature 92 114 5.7E-7 T 11-10-2018 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00145 Argininosuccinate lyase family signature 266 282 5.7E-7 T 11-10-2018 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00145 Argininosuccinate lyase family signature 221 245 5.7E-7 T 11-10-2018 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00145 Argininosuccinate lyase family signature 133 153 5.7E-7 T 11-10-2018 AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00149 Fumarate lyase superfamily signature 221 248 1.5E-23 T 11-10-2018 IPR000362 Fumarate lyase family AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 1.5E-23 T 11-10-2018 IPR000362 Fumarate lyase family AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00149 Fumarate lyase superfamily signature 266 282 1.5E-23 T 11-10-2018 IPR000362 Fumarate lyase family AM384 ffa8fb8ec416e38fd9254fb1f847f63a 438 PRINTS PR00149 Fumarate lyase superfamily signature 93 111 1.5E-23 T 11-10-2018 IPR000362 Fumarate lyase family AM510 ba08ae095444985dc22389f1b365b28d 325 SUPERFAMILY SSF51905 6 317 2.44E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM510 ba08ae095444985dc22389f1b365b28d 325 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 Gene3D G3DSA:3.50.50.60 128 253 5.8E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 46 61 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 13 35 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 263 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 201 217 1.9E-74 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AM510 ba08ae095444985dc22389f1b365b28d 325 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 13 318 1.4E-115 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.7E-35 T 11-10-2018 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 4.7E-35 T 11-10-2018 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 4.7E-35 T 11-10-2018 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.7E-35 T 11-10-2018 AM510 ba08ae095444985dc22389f1b365b28d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 4.7E-35 T 11-10-2018 AM510 ba08ae095444985dc22389f1b365b28d 325 Gene3D G3DSA:3.50.50.60 14 317 5.8E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM510 ba08ae095444985dc22389f1b365b28d 325 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 307 5.4E-44 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AM264 ea5e95cbce26745cab590d314f235ee1 339 SUPERFAMILY SSF53098 112 307 8.8E-63 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM264 ea5e95cbce26745cab590d314f235ee1 339 Pfam PF01351 Ribonuclease HII 122 300 7.4E-41 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain AM264 ea5e95cbce26745cab590d314f235ee1 339 Gene3D G3DSA:3.30.420.10 100 325 3.9E-72 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM264 ea5e95cbce26745cab590d314f235ee1 339 Hamap MF_00052_B Ribonuclease HII [rnhB]. 120 301 34.602 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 AM126 9fa988463e34402bae9d524b67034de2 171 SUPERFAMILY SSF53098 25 164 3.54E-53 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM126 9fa988463e34402bae9d524b67034de2 171 Hamap MF_00042 Ribonuclease H [rnhA]. 23 171 31.652 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 AM126 9fa988463e34402bae9d524b67034de2 171 Pfam PF00075 RNase H 25 162 2.4E-46 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 AM126 9fa988463e34402bae9d524b67034de2 171 Gene3D G3DSA:3.30.420.10 21 168 5.0E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 SMART SM00244 24 186 8.8E-30 T 11-10-2018 IPR001107 Band 7 domain AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 Pfam PF01145 SPFH domain / Band 7 family 28 203 3.7E-29 T 11-10-2018 IPR001107 Band 7 domain AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 Gene3D G3DSA:3.30.479.30 53 188 8.1E-21 T 11-10-2018 AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 PIRSF PIRSF005651 2 290 2.8E-84 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 SUPERFAMILY SSF117892 56 193 9.81E-25 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 PRINTS PR00721 Stomatin signature 162 180 2.6E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 PRINTS PR00721 Stomatin signature 31 53 2.6E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 PRINTS PR00721 Stomatin signature 181 202 2.6E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AM1065 2d50e4eb9f81bb9d18c7580884e2af3f 290 PRINTS PR00721 Stomatin signature 79 100 2.6E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 AM149 7048890c334bb45383fbc435022376d2 92 PIRSF PIRSF002599 7 92 2.3E-16 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 AM149 7048890c334bb45383fbc435022376d2 92 SMART SM00357 13 90 1.9E-16 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 AM149 7048890c334bb45383fbc435022376d2 92 Gene3D G3DSA:2.40.50.140 10 89 5.8E-22 T 11-10-2018 AM149 7048890c334bb45383fbc435022376d2 92 SUPERFAMILY SSF50249 11 89 1.71E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM149 7048890c334bb45383fbc435022376d2 92 Pfam PF00313 'Cold-shock' DNA-binding domain 45 88 4.7E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM149 7048890c334bb45383fbc435022376d2 92 Pfam PF00313 'Cold-shock' DNA-binding domain 13 34 5.6E-6 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AM178 0b142ad9f067735af2715de40f77306d 370 Pfam PF01522 Polysaccharide deacetylase 117 217 1.1E-13 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 AM178 0b142ad9f067735af2715de40f77306d 370 Gene3D G3DSA:3.20.20.370 105 330 1.2E-40 T 11-10-2018 AM178 0b142ad9f067735af2715de40f77306d 370 SUPERFAMILY SSF88713 115 326 1.56E-33 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 Pfam PF02132 RecR protein 56 92 1.6E-10 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 Pfam PF13662 Toprim domain 94 185 2.6E-22 T 11-10-2018 IPR006171 TOPRIM domain AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 ProSitePatterns PS01300 RecR protein signature. 71 92 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 SUPERFAMILY SSF111304 20 212 1.57E-66 T 11-10-2018 IPR023627 Recombination protein RecR AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 Gene3D G3DSA:1.10.8.420 18 66 8.8E-8 T 11-10-2018 AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 TIGRFAM TIGR00615 recR: recombination protein RecR 20 209 1.4E-55 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 Hamap MF_00017 Recombination protein RecR [recR]. 1 212 77.336 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 SMART SM00493 94 179 0.0024 T 11-10-2018 IPR006171 TOPRIM domain AM394 cf64bca9779c9d745b2ae2bd1fa3dc21 213 Gene3D G3DSA:3.40.1360.10 91 211 1.7E-39 T 11-10-2018 AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 5.2E-31 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 90 19.157 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 SUPERFAMILY SSF47060 3 90 3.24E-28 T 11-10-2018 IPR009068 S15/NS1, RNA-binding AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 SMART SM01387 8 89 1.5E-37 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 Pfam PF00312 Ribosomal protein S15 8 89 1.8E-29 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 89 1.0E-40 T 11-10-2018 AM525 7685fb851ce2c12c8b1d17fdc26aa2aa 93 Gene3D G3DSA:1.10.287.10 1 90 7.3E-28 T 11-10-2018 AM101 52840b9bd54faa33d141cc9f572aba39 372 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 58 372 9.8E-147 T 11-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 AM101 52840b9bd54faa33d141cc9f572aba39 372 Gene3D G3DSA:3.40.50.970 27 372 4.7E-131 T 11-10-2018 AM101 52840b9bd54faa33d141cc9f572aba39 372 Pfam PF00676 Dehydrogenase E1 component 66 362 3.6E-103 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 AM101 52840b9bd54faa33d141cc9f572aba39 372 SUPERFAMILY SSF52518 49 372 1.05E-104 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AM223 de01510362e1fa629d92226dd2982712 375 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 368 1.5E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 AM223 de01510362e1fa629d92226dd2982712 375 SUPERFAMILY SSF161098 118 360 1.31E-32 T 11-10-2018 IPR035906 MetI-like superfamily AM223 de01510362e1fa629d92226dd2982712 375 Gene3D G3DSA:1.10.3720.10 140 370 9.3E-36 T 11-10-2018 IPR035906 MetI-like superfamily AM223 de01510362e1fa629d92226dd2982712 375 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 79 368 1.1E-76 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 SMART SM00382 232 413 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 17 519 3.6E-152 T 11-10-2018 IPR004482 Mg chelatase-related protein AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 Pfam PF01078 Magnesium chelatase, subunit ChlI 212 413 1.3E-91 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 Pfam PF13541 Subunit ChlI of Mg-chelatase 32 154 2.4E-40 T 11-10-2018 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 SUPERFAMILY SSF52540 212 519 4.21E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 231 246 4.8E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 362 374 4.8E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 310 324 4.8E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 338 351 4.8E-7 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 Gene3D G3DSA:3.40.50.300 212 524 5.6E-54 T 11-10-2018 AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 424 519 1.3E-20 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 SUPERFAMILY SSF54211 19 181 5.31E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM626 becb4ba9813f0a3edc7f1aaccad5566c 526 Gene3D G3DSA:3.30.230.10 21 182 1.9E-8 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM705 99aa738b8a23514f241fec87ab8d4c73 1387 PRINTS PR01415 Ankyrin repeat signature 469 484 6.7E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 PRINTS PR01415 Ankyrin repeat signature 706 720 6.7E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SUPERFAMILY SSF48403 590 733 2.63E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 119 148 0.0026 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 799 829 690.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 688 719 0.03 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 224 254 2100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 152 186 3100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 723 760 580.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 192 220 370.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 843 872 230.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 468 497 1.7 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SMART SM00248 764 795 170.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SUPERFAMILY SSF48403 117 884 4.15E-34 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM705 99aa738b8a23514f241fec87ab8d4c73 1387 Gene3D G3DSA:1.25.40.20 306 500 1.6E-11 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM705 99aa738b8a23514f241fec87ab8d4c73 1387 Pfam PF12796 Ankyrin repeats (3 copies) 116 175 4.9E-7 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AM705 99aa738b8a23514f241fec87ab8d4c73 1387 Pfam PF12796 Ankyrin repeats (3 copies) 665 761 1.3E-7 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AM705 99aa738b8a23514f241fec87ab8d4c73 1387 Gene3D G3DSA:1.25.40.20 77 302 2.4E-19 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM705 99aa738b8a23514f241fec87ab8d4c73 1387 SUPERFAMILY SSF48403 114 489 2.28E-22 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM705 99aa738b8a23514f241fec87ab8d4c73 1387 Gene3D G3DSA:1.25.40.20 510 737 3.0E-16 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM705 99aa738b8a23514f241fec87ab8d4c73 1387 Gene3D G3DSA:1.25.40.20 740 907 1.1E-19 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM1097 8909768d452ae2b6a44c3140ff88141d 186 SMART SM00935 15 175 1.2E-27 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AM1097 8909768d452ae2b6a44c3140ff88141d 186 Pfam PF03938 Outer membrane protein (OmpH-like) 16 174 1.4E-21 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 AM1097 8909768d452ae2b6a44c3140ff88141d 186 Gene3D G3DSA:3.30.910.20 23 185 4.3E-25 T 11-10-2018 IPR024930 Skp domain superfamily AM1097 8909768d452ae2b6a44c3140ff88141d 186 SUPERFAMILY SSF111384 34 175 2.75E-19 T 11-10-2018 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 Hamap MF_00323 Ferrochelatase [hemH]. 7 324 30.741 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 Gene3D G3DSA:3.40.50.1400 167 305 1.8E-97 T 11-10-2018 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 TIGRFAM TIGR00109 hemH: ferrochelatase 5 321 2.1E-78 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 SUPERFAMILY SSF53800 7 335 1.54E-89 T 11-10-2018 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 ProSitePatterns PS00534 Ferrochelatase signature. 196 214 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 Gene3D G3DSA:3.40.50.1400 8 320 1.8E-97 T 11-10-2018 AM922 8b98e8bd506e03cacb2955eea0f7b2fc 350 Pfam PF00762 Ferrochelatase 8 321 3.0E-97 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 7.3E-68 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.8E-28 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Gene3D G3DSA:3.30.1490.20 120 188 9.6E-23 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 7.4E-143 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Gene3D G3DSA:3.40.50.20 2 93 5.1E-31 T 11-10-2018 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 SUPERFAMILY SSF51246 326 418 7.14E-26 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 SMART SM01210 327 419 2.0E-41 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 SUPERFAMILY SSF52440 1 100 4.6E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 5.8E-26 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Gene3D G3DSA:3.90.600.10 327 419 4.9E-31 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 SUPERFAMILY SSF56059 102 319 3.36E-54 T 11-10-2018 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Gene3D G3DSA:3.30.470.20 189 326 2.1E-52 T 11-10-2018 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 SMART SM01209 101 293 2.5E-108 T 11-10-2018 AM1011 9e7bf1d1f80eddff700b387c37eea4f3 420 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 36.569 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 Gene3D G3DSA:3.90.1310.30 64 244 1.2E-28 T 11-10-2018 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 SUPERFAMILY SSF56519 63 248 1.14E-36 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 Gene3D G3DSA:3.40.710.10 245 595 3.1E-80 T 11-10-2018 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 580 3.9E-53 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 234 8.1E-24 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 26 586 1.4E-152 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM1196 8cc531cda08633dbe5f63bdaf1773129 601 SUPERFAMILY SSF56601 250 586 7.09E-79 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 PIRSF PIRSF004486 1 291 1.1E-102 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 SUPERFAMILY SSF53335 3 290 1.69E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 SUPERFAMILY SSF81799 110 210 2.88E-30 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 Pfam PF01795 MraW methylase family 2 289 3.8E-92 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 Gene3D G3DSA:1.10.150.170 108 211 2.5E-96 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 Gene3D G3DSA:3.40.50.150 3 287 2.5E-96 T 11-10-2018 AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 289 1.8E-89 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM605 a3ee5ec2997e3af4aa70a723a351e3fb 291 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 3 290 34.645 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 AM327 1147d0eecd5f048e20722961a2648647 468 Gene3D G3DSA:1.10.287.130 202 299 5.1E-28 T 11-10-2018 AM327 1147d0eecd5f048e20722961a2648647 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 458 1.2E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM327 1147d0eecd5f048e20722961a2648647 468 SMART SM00388 232 301 1.9E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM327 1147d0eecd5f048e20722961a2648647 468 SUPERFAMILY SSF55874 290 457 1.23E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM327 1147d0eecd5f048e20722961a2648647 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM327 1147d0eecd5f048e20722961a2648647 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM327 1147d0eecd5f048e20722961a2648647 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 5.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM327 1147d0eecd5f048e20722961a2648647 468 SMART SM00387 347 459 3.9E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM327 1147d0eecd5f048e20722961a2648647 468 SUPERFAMILY SSF47384 218 302 9.42E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM327 1147d0eecd5f048e20722961a2648647 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 300 1.6E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM327 1147d0eecd5f048e20722961a2648647 468 Gene3D G3DSA:3.30.565.10 312 466 4.6E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM169 f45659d67714e7d453ac780a896827e1 262 Gene3D G3DSA:1.10.1060.10 130 261 5.5E-58 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM169 f45659d67714e7d453ac780a896827e1 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 5.8E-32 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM169 f45659d67714e7d453ac780a896827e1 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AM169 f45659d67714e7d453ac780a896827e1 262 SUPERFAMILY SSF54292 29 129 9.42E-31 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM169 f45659d67714e7d453ac780a896827e1 262 Gene3D G3DSA:3.10.20.30 19 129 3.8E-43 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AM169 f45659d67714e7d453ac780a896827e1 262 SUPERFAMILY SSF46548 131 258 4.01E-37 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 AM169 f45659d67714e7d453ac780a896827e1 262 Pfam PF13183 4Fe-4S dicluster domain 170 242 5.4E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM169 f45659d67714e7d453ac780a896827e1 262 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 253 1.1E-82 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM169 f45659d67714e7d453ac780a896827e1 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM1205 0e2656c98fe95a31e15a61565c093052 414 Gene3D G3DSA:3.10.290.10 330 390 1.5E-10 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM1205 0e2656c98fe95a31e15a61565c093052 414 SUPERFAMILY SSF55174 331 412 1.7E-11 T 11-10-2018 AM1205 0e2656c98fe95a31e15a61565c093052 414 SUPERFAMILY SSF52374 7 323 4.15E-88 T 11-10-2018 AM1205 0e2656c98fe95a31e15a61565c093052 414 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 5 412 39.3 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 AM1205 0e2656c98fe95a31e15a61565c093052 414 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 8 411 5.0E-99 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM1205 0e2656c98fe95a31e15a61565c093052 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 164 179 2.2E-21 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM1205 0e2656c98fe95a31e15a61565c093052 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 185 207 2.2E-21 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM1205 0e2656c98fe95a31e15a61565c093052 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 2.2E-21 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM1205 0e2656c98fe95a31e15a61565c093052 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 218 230 2.2E-21 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 AM1205 0e2656c98fe95a31e15a61565c093052 414 Pfam PF00579 tRNA synthetases class I (W and Y) 33 323 1.4E-65 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1205 0e2656c98fe95a31e15a61565c093052 414 Gene3D G3DSA:3.40.50.620 1 224 1.5E-80 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1205 0e2656c98fe95a31e15a61565c093052 414 Gene3D G3DSA:1.10.240.10 225 329 4.4E-29 T 11-10-2018 AM631 a138e24d0745251d9300a49225db609b 290 Gene3D G3DSA:1.10.10.10 213 285 1.6E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM631 a138e24d0745251d9300a49225db609b 290 Pfam PF04545 Sigma-70, region 4 228 278 2.8E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 SUPERFAMILY SSF88946 10 120 8.48E-35 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 Gene3D G3DSA:1.20.120.1810 13 119 2.6E-28 T 11-10-2018 AM631 a138e24d0745251d9300a49225db609b 290 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 279 4.6E-30 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 Pfam PF04542 Sigma-70 region 2 52 120 6.3E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 SUPERFAMILY SSF88659 189 286 1.33E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM631 a138e24d0745251d9300a49225db609b 290 PRINTS PR00046 Major sigma-70 factor signature 232 244 1.8E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 PRINTS PR00046 Major sigma-70 factor signature 100 108 1.8E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 PRINTS PR00046 Major sigma-70 factor signature 76 89 1.8E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 PRINTS PR00046 Major sigma-70 factor signature 251 266 1.8E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM631 a138e24d0745251d9300a49225db609b 290 PRINTS PR00046 Major sigma-70 factor signature 266 277 1.8E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM440 4ae15a75be374cec9af3b7e5a346304c 600 Pfam PF13667 ThiC-associated domain 54 122 1.5E-19 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM440 4ae15a75be374cec9af3b7e5a346304c 600 Pfam PF01964 Radical SAM ThiC family 157 595 2.5E-196 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM440 4ae15a75be374cec9af3b7e5a346304c 600 Gene3D G3DSA:3.20.20.540 218 531 1.7E-151 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM440 4ae15a75be374cec9af3b7e5a346304c 600 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 156 600 95.412 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM440 4ae15a75be374cec9af3b7e5a346304c 600 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 156 598 1.3E-206 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 AM332 02b358d43376510e4dfb3858e97e3642 394 SMART SM01340 213 333 4.0E-47 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AM332 02b358d43376510e4dfb3858e97e3642 394 SUPERFAMILY SSF54211 197 333 6.07E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM332 02b358d43376510e4dfb3858e97e3642 394 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 8 313 1.6E-77 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 AM332 02b358d43376510e4dfb3858e97e3642 394 Gene3D G3DSA:3.30.230.10 220 332 5.0E-33 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM332 02b358d43376510e4dfb3858e97e3642 394 SUPERFAMILY SSF55874 8 216 5.5E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM332 02b358d43376510e4dfb3858e97e3642 394 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 97 103 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site AM332 02b358d43376510e4dfb3858e97e3642 394 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 132 7.9E-13 T 11-10-2018 AM332 02b358d43376510e4dfb3858e97e3642 394 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 217 332 3.6E-37 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 AM332 02b358d43376510e4dfb3858e97e3642 394 Gene3D G3DSA:3.30.565.10 6 216 1.2E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM1000 b7118e2587fd4d443ac4cadeb10984d1 247 Gene3D G3DSA:3.40.50.150 13 231 2.7E-69 T 11-10-2018 AM1000 b7118e2587fd4d443ac4cadeb10984d1 247 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 5 230 35.14 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM1000 b7118e2587fd4d443ac4cadeb10984d1 247 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 AM1000 b7118e2587fd4d443ac4cadeb10984d1 247 SUPERFAMILY SSF53335 7 233 8.9E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM1000 b7118e2587fd4d443ac4cadeb10984d1 247 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 230 1.3E-78 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM1000 b7118e2587fd4d443ac4cadeb10984d1 247 Pfam PF01209 ubiE/COQ5 methyltransferase family 6 230 6.2E-74 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 AM506 1caa6612d2c00f16d0e7d68551475024 120 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 118 1.3E-25 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM506 1caa6612d2c00f16d0e7d68551475024 120 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 116 2.1E-20 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM506 1caa6612d2c00f16d0e7d68551475024 120 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 120 22.69 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM506 1caa6612d2c00f16d0e7d68551475024 120 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 118 2.3E-23 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM506 1caa6612d2c00f16d0e7d68551475024 120 SUPERFAMILY SSF56214 2 118 1.31E-28 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM506 1caa6612d2c00f16d0e7d68551475024 120 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 118 3.0E-58 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 AM506 1caa6612d2c00f16d0e7d68551475024 120 Gene3D G3DSA:3.90.470.20 1 119 5.7E-33 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 AM941 f690f062e6339eef0ff59fb8aff96219 214 Gene3D G3DSA:3.30.930.10 8 212 5.7E-61 T 11-10-2018 AM941 f690f062e6339eef0ff59fb8aff96219 214 SUPERFAMILY SSF55681 13 211 1.57E-57 T 11-10-2018 AM941 f690f062e6339eef0ff59fb8aff96219 214 Hamap MF_00013 Octanoyltransferase [lipB]. 8 214 31.459 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM941 f690f062e6339eef0ff59fb8aff96219 214 Pfam PF03099 Biotin/lipoate A/B protein ligase family 66 168 3.1E-8 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM941 f690f062e6339eef0ff59fb8aff96219 214 PIRSF PIRSF016262 8 214 1.6E-55 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM941 f690f062e6339eef0ff59fb8aff96219 214 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 81 133 1.0E-24 T 11-10-2018 AM941 f690f062e6339eef0ff59fb8aff96219 214 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 37 192 1.1E-43 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 PIRSF PIRSF003095 30 462 7.3E-69 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 SUPERFAMILY SSF102735 32 162 1.96E-24 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Pfam PF05697 Bacterial trigger factor protein (TF) 35 179 2.4E-25 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 309 444 7.8E-12 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Hamap MF_00303 Trigger factor [tig]. 30 450 15.021 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 SUPERFAMILY SSF54534 168 283 3.54E-19 T 11-10-2018 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 SUPERFAMILY SSF109998 289 461 2.49E-28 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Gene3D G3DSA:1.10.3120.10 151 448 4.5E-50 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 195 263 5.6E-6 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain AM308 983f74d8329e92f30e22d6bc00b9edd5 466 TIGRFAM TIGR00115 tig: trigger factor 40 443 6.8E-100 T 11-10-2018 IPR005215 Trigger factor GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Gene3D G3DSA:3.30.70.1050 29 150 2.9E-24 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 AM308 983f74d8329e92f30e22d6bc00b9edd5 466 Gene3D G3DSA:3.10.50.40 186 285 4.5E-50 T 11-10-2018 AM875 017eca35f5440e51d578c23abe093448 161 SMART SM00903 15 158 5.2E-55 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM875 017eca35f5440e51d578c23abe093448 161 SUPERFAMILY SSF50475 6 159 2.11E-46 T 11-10-2018 AM875 017eca35f5440e51d578c23abe093448 161 Pfam PF01613 Flavin reductase like domain 15 159 4.6E-35 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 AM875 017eca35f5440e51d578c23abe093448 161 Gene3D G3DSA:2.30.110.10 3 161 2.6E-47 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 AM854 167752881db6187a8fc5c7f6a507c5b2 236 PRINTS PR01021 OMPA domain signature 91 107 1.2E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM854 167752881db6187a8fc5c7f6a507c5b2 236 PRINTS PR01021 OMPA domain signature 76 91 1.2E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM854 167752881db6187a8fc5c7f6a507c5b2 236 PRINTS PR01021 OMPA domain signature 46 68 1.2E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AM854 167752881db6187a8fc5c7f6a507c5b2 236 Pfam PF00691 OmpA family 45 127 8.1E-14 T 11-10-2018 IPR006665 OmpA-like domain AM854 167752881db6187a8fc5c7f6a507c5b2 236 SUPERFAMILY SSF103088 41 153 1.83E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily AM854 167752881db6187a8fc5c7f6a507c5b2 236 Gene3D G3DSA:3.30.1330.60 36 153 2.7E-27 T 11-10-2018 IPR036737 OmpA-like domain superfamily AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 Pfam PF01479 S4 domain 16 61 5.4E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 SMART SM00363 16 79 8.2E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 Gene3D G3DSA:3.10.290.10 2 70 4.6E-13 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 SUPERFAMILY SSF55174 16 64 3.87E-9 T 11-10-2018 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 Gene3D G3DSA:3.30.2350.10 82 319 6.1E-69 T 11-10-2018 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 SUPERFAMILY SSF55120 78 316 1.64E-66 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 Pfam PF00849 RNA pseudouridylate synthase 90 247 2.5E-29 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM825 c115b5e72e15cbf5ef5f2dbc65d38e18 327 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 315 7.2E-79 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AM1276 be6022d4db83c112f07446aadd046693 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 229 7.6E-54 T 11-10-2018 IPR006214 Bax inhibitor 1-related AM658 3ab9a61b11375409002cc282f2a67d3c 533 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 31 526 1.2E-57 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AM658 3ab9a61b11375409002cc282f2a67d3c 533 Gene3D G3DSA:3.40.50.620 25 289 5.8E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM658 3ab9a61b11375409002cc282f2a67d3c 533 Pfam PF01921 tRNA synthetases class I (K) 24 370 3.8E-123 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AM658 3ab9a61b11375409002cc282f2a67d3c 533 SUPERFAMILY SSF48163 337 526 2.09E-32 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM658 3ab9a61b11375409002cc282f2a67d3c 533 Gene3D G3DSA:1.10.10.350 437 526 4.1E-16 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM658 3ab9a61b11375409002cc282f2a67d3c 533 Gene3D G3DSA:2.30.30.300 191 236 5.8E-74 T 11-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 AM658 3ab9a61b11375409002cc282f2a67d3c 533 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 23 527 28.425 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AM658 3ab9a61b11375409002cc282f2a67d3c 533 SUPERFAMILY SSF52374 25 338 7.78E-57 T 11-10-2018 AM658 3ab9a61b11375409002cc282f2a67d3c 533 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 51 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 Gene3D G3DSA:1.10.8.10 4 88 1.2E-20 T 11-10-2018 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 260 1.8E-53 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 SUPERFAMILY SSF53335 8 267 1.39E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM1084 0015e6b3512fc98bf2527c63f487f21c 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 6 281 36.53 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 Pfam PF05175 Methyltransferase small domain 116 193 2.0E-10 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 Gene3D G3DSA:3.40.50.150 89 281 6.5E-49 T 11-10-2018 AM1084 0015e6b3512fc98bf2527c63f487f21c 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 277 4.3E-69 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AM784 8152ab8c7f858967c08cc117432f1d08 174 SUPERFAMILY SSF50022 22 166 6.55E-42 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM784 8152ab8c7f858967c08cc117432f1d08 174 Gene3D G3DSA:2.102.10.10 34 166 6.3E-53 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 AM784 8152ab8c7f858967c08cc117432f1d08 174 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 2 33 5.1E-10 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AM784 8152ab8c7f858967c08cc117432f1d08 174 PRINTS PR00162 Rieske 2Fe-2S subunit signature 104 115 3.8E-16 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AM784 8152ab8c7f858967c08cc117432f1d08 174 PRINTS PR00162 Rieske 2Fe-2S subunit signature 138 150 3.8E-16 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AM784 8152ab8c7f858967c08cc117432f1d08 174 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 138 3.8E-16 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 AM784 8152ab8c7f858967c08cc117432f1d08 174 Gene3D G3DSA:1.20.5.510 1 33 4.5E-6 T 11-10-2018 AM784 8152ab8c7f858967c08cc117432f1d08 174 Pfam PF00355 Rieske [2Fe-2S] domain 51 151 2.8E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 AM784 8152ab8c7f858967c08cc117432f1d08 174 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 2 166 3.6E-62 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 AM420 111b100b940ae4aeb519e7d14f74e1db 487 SUPERFAMILY SSF103473 63 460 2.09E-39 T 11-10-2018 IPR036259 MFS transporter superfamily AM420 111b100b940ae4aeb519e7d14f74e1db 487 Pfam PF00083 Sugar (and other) transporter 62 271 6.7E-16 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM420 111b100b940ae4aeb519e7d14f74e1db 487 Gene3D G3DSA:1.20.1250.20 61 464 4.0E-40 T 11-10-2018 AM920 59c90c9a0de43cc973846587f5a4f59a 145 Pfam PF05164 Cell division protein ZapA 12 91 6.7E-13 T 11-10-2018 IPR007838 Cell division protein ZapA-like AM920 59c90c9a0de43cc973846587f5a4f59a 145 SUPERFAMILY SSF102829 12 92 3.01E-13 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 Gene3D G3DSA:1.20.1640.10 129 310 2.4E-12 T 11-10-2018 AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 SUPERFAMILY SSF82866 129 292 1.96E-33 T 11-10-2018 AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 PRINTS PR01755 Bacterial translocase SecF protein signature 156 170 5.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 PRINTS PR01755 Bacterial translocase SecF protein signature 41 56 5.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 PRINTS PR01755 Bacterial translocase SecF protein signature 204 222 5.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 PRINTS PR01755 Bacterial translocase SecF protein signature 238 253 5.3E-23 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 Pfam PF02355 Protein export membrane protein 121 291 2.4E-50 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 121 287 1.5E-46 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 14 301 27.862 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM1197 78efce0ca4473d6e10b5b16b3226f3cf 311 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 290 2.2E-61 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AM1295 1b7beabee54487571ead0e70445b11c7 694 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 550 2.4E-145 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 306 322 4.3E-17 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 4.3E-17 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 383 402 4.3E-17 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 238 253 4.3E-17 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 Pfam PF05746 DALR anticodon binding domain 579 680 1.5E-5 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AM1295 1b7beabee54487571ead0e70445b11c7 694 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 690 9.2E-132 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 690 18.986 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1295 1b7beabee54487571ead0e70445b11c7 694 SUPERFAMILY SSF109604 327 472 2.2E-11 T 11-10-2018 AM1348 b26835ffd808fe0fae334bd92509333a 563 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 2.1E-57 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AM1348 b26835ffd808fe0fae334bd92509333a 563 Pfam PF02254 TrkA-N domain 408 521 4.1E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AM1348 b26835ffd808fe0fae334bd92509333a 563 Gene3D G3DSA:1.20.1530.20 3 383 1.8E-78 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AM1348 b26835ffd808fe0fae334bd92509333a 563 SUPERFAMILY SSF51735 406 536 3.38E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1348 b26835ffd808fe0fae334bd92509333a 563 Gene3D G3DSA:3.40.50.720 404 563 4.6E-30 T 11-10-2018 AM156 e4ac37a10889872fa91507b518614b7d 183 SUPERFAMILY SSF52833 50 177 1.85E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM156 e4ac37a10889872fa91507b518614b7d 183 ProSitePatterns PS00194 Thioredoxin family active site. 78 96 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 AM156 e4ac37a10889872fa91507b518614b7d 183 Gene3D G3DSA:3.40.30.10 44 182 1.3E-21 T 11-10-2018 AM764 e67e9826e2a46112878e311ceaf5d921 205 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 9 194 24.124 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM764 e67e9826e2a46112878e311ceaf5d921 205 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 190 3.1E-62 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 AM764 e67e9826e2a46112878e311ceaf5d921 205 Gene3D G3DSA:3.40.50.300 1 198 1.9E-47 T 11-10-2018 AM764 e67e9826e2a46112878e311ceaf5d921 205 SUPERFAMILY SSF52540 11 196 5.05E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM764 e67e9826e2a46112878e311ceaf5d921 205 Pfam PF01926 50S ribosome-binding GTPase 24 142 6.3E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 Pfam PF00119 ATP synthase A chain 57 261 2.9E-53 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 Gene3D G3DSA:1.20.120.220 104 267 5.3E-35 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 PRINTS PR00123 ATP synthase A subunit signature 193 215 6.4E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 PRINTS PR00123 ATP synthase A subunit signature 173 188 6.4E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 PRINTS PR00123 ATP synthase A subunit signature 247 262 6.4E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 PRINTS PR00123 ATP synthase A subunit signature 112 128 6.4E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 30 263 2.9E-63 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 Hamap MF_01393 ATP synthase subunit a [atpB]. 31 267 14.966 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1110 3b1c8b68f858c6815b7e2c617a26902c 267 SUPERFAMILY SSF81336 105 261 2.62E-43 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM261 a40830d6342dc1af691107bcb4056d7e 134 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 66 107 4.0E-13 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM261 a40830d6342dc1af691107bcb4056d7e 134 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 134 16.738 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM261 a40830d6342dc1af691107bcb4056d7e 134 SUPERFAMILY SSF48300 5 65 7.98E-7 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM261 a40830d6342dc1af691107bcb4056d7e 134 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 64 134 3.5E-21 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM261 a40830d6342dc1af691107bcb4056d7e 134 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 134 1.7E-26 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM261 a40830d6342dc1af691107bcb4056d7e 134 SUPERFAMILY SSF54736 64 134 9.94E-17 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM261 a40830d6342dc1af691107bcb4056d7e 134 Gene3D G3DSA:3.30.1390.10 63 134 8.4E-21 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 23 436 2.5E-115 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 SUPERFAMILY SSF52964 32 166 7.06E-27 T 11-10-2018 AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Gene3D G3DSA:3.40.50.10070 23 169 2.2E-24 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 9 435 40.735 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Pfam PF07676 WD40-like Beta Propeller Repeat 329 357 3.4E-5 T 11-10-2018 IPR011659 WD40-like Beta Propeller AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Pfam PF07676 WD40-like Beta Propeller Repeat 285 320 2.9E-8 T 11-10-2018 IPR011659 WD40-like Beta Propeller AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Pfam PF07676 WD40-like Beta Propeller Repeat 382 396 0.026 T 11-10-2018 IPR011659 WD40-like Beta Propeller AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Pfam PF07676 WD40-like Beta Propeller Repeat 249 275 0.29 T 11-10-2018 IPR011659 WD40-like Beta Propeller AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 SUPERFAMILY SSF69304 161 437 5.62E-53 T 11-10-2018 AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Pfam PF04052 TolB amino-terminal domain 28 134 1.7E-19 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 AM244 4f53c0ebbbe2fb787f8d9cfcb2b7649d 441 Gene3D G3DSA:2.120.10.30 170 441 7.3E-69 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like AM869 e435da0af2dc264bcc11ba9c2fcde8be 322 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 233 321 3.7E-32 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM869 e435da0af2dc264bcc11ba9c2fcde8be 322 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 321 2.9E-117 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM869 e435da0af2dc264bcc11ba9c2fcde8be 322 SUPERFAMILY SSF53901 6 321 2.22E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AM869 e435da0af2dc264bcc11ba9c2fcde8be 322 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 189 6.4E-30 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM869 e435da0af2dc264bcc11ba9c2fcde8be 322 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 322 67.683 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 AM869 e435da0af2dc264bcc11ba9c2fcde8be 322 Gene3D G3DSA:3.40.47.10 3 322 7.1E-117 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AM073 971e75432b8324a9cb701651a34f4051 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 145 1.1E-46 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM073 971e75432b8324a9cb701651a34f4051 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 67.271 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AM073 971e75432b8324a9cb701651a34f4051 151 Pfam PF03477 ATP cone domain 50 136 2.6E-11 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 AM1007 0cffcc5291e5a24fa911982f73e88293 276 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 41 126 3.3E-15 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1007 0cffcc5291e5a24fa911982f73e88293 276 Gene3D G3DSA:2.60.40.420 139 273 2.9E-56 T 11-10-2018 IPR008972 Cupredoxin AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 116 136 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 180 201 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 224 241 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 104 116 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 138 157 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 242 259 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 PRINTS PR01166 Cytochrome c oxidase subunit II signature 204 224 1.7E-44 T 11-10-2018 AM1007 0cffcc5291e5a24fa911982f73e88293 276 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 142 260 3.5E-54 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1007 0cffcc5291e5a24fa911982f73e88293 276 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 205 253 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1007 0cffcc5291e5a24fa911982f73e88293 276 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 51 269 5.4E-64 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1007 0cffcc5291e5a24fa911982f73e88293 276 SUPERFAMILY SSF49503 138 274 5.96E-57 T 11-10-2018 IPR008972 Cupredoxin AM1007 0cffcc5291e5a24fa911982f73e88293 276 SUPERFAMILY SSF81464 35 131 1.34E-23 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1007 0cffcc5291e5a24fa911982f73e88293 276 Gene3D G3DSA:1.10.287.90 40 138 9.6E-25 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1128 e7e15b6b1891a92e7a49cde0e723209f 227 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 171 6.3E-34 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM1128 e7e15b6b1891a92e7a49cde0e723209f 227 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 199 21.263 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM1128 e7e15b6b1891a92e7a49cde0e723209f 227 PIRSF PIRSF006755 1 205 1.2E-36 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 AM1128 e7e15b6b1891a92e7a49cde0e723209f 227 Gene3D G3DSA:3.40.50.300 1 205 4.8E-46 T 11-10-2018 AM1128 e7e15b6b1891a92e7a49cde0e723209f 227 SUPERFAMILY SSF52540 1 196 2.6E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1128 e7e15b6b1891a92e7a49cde0e723209f 227 Pfam PF13500 AAA domain 4 173 2.2E-27 T 11-10-2018 AM477 f8622d85e978b1e990071862ef7b684c 1617 SUPERFAMILY SSF51735 936 1238 3.11E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM477 f8622d85e978b1e990071862ef7b684c 1617 SUPERFAMILY SSF53223 750 931 6.04E-26 T 11-10-2018 AM477 f8622d85e978b1e990071862ef7b684c 1617 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 109 1607 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AM477 f8622d85e978b1e990071862ef7b684c 1617 PIRSF PIRSF036761 31 1614 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 251 260 8.5E-5 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 8.5E-5 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 8.5E-5 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 29 143 2.0E-16 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 Gene3D G3DSA:3.40.50.1370 29 293 1.2E-43 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 277 288 4.7E-7 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 4.7E-7 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 4.7E-7 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 4.7E-7 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 PRINTS PR00102 Ornithine carbamoyltransferase signature 219 229 4.7E-7 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 294 2.0E-26 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 Gene3D G3DSA:3.40.50.1370 135 285 1.2E-43 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM1217 4597c68b74c7faefa1831d2c98ada8ab 302 SUPERFAMILY SSF53671 11 298 2.49E-44 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 AM1306 2655b17c4790a9df77c695ac4714a442 266 SUPERFAMILY SSF53335 21 196 1.69E-30 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM1306 2655b17c4790a9df77c695ac4714a442 266 Gene3D G3DSA:3.40.50.150 23 206 5.8E-29 T 11-10-2018 AM1306 2655b17c4790a9df77c695ac4714a442 266 Pfam PF08241 Methyltransferase domain 59 145 2.6E-18 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM328 8864cc34cb24dc1fcafd695b8879a56a 283 SUPERFAMILY SSF74653 186 280 2.55E-10 T 11-10-2018 AM328 8864cc34cb24dc1fcafd695b8879a56a 283 Gene3D G3DSA:3.30.1150.10 165 281 8.1E-18 T 11-10-2018 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 Pfam PF00164 Ribosomal protein S12/S23 12 122 7.9E-39 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 Gene3D G3DSA:2.40.50.140 1 124 5.3E-59 T 11-10-2018 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 SUPERFAMILY SSF50249 2 122 4.88E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PIRSF PIRSF002133 1 124 8.5E-53 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 122 2.0E-61 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 124 37.652 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PRINTS PR01034 Ribosomal protein S12 signature 95 111 2.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PRINTS PR01034 Ribosomal protein S12 signature 111 123 2.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PRINTS PR01034 Ribosomal protein S12 signature 59 78 2.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM249 8f81388b9855df1c5db4b48e5b2400e2 124 PRINTS PR01034 Ribosomal protein S12 signature 78 95 2.1E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM943 e381e792f112eddaae776960d63c3f1e 107 Hamap MF_00580 10 kDa chaperonin [groS]. 15 107 19.493 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 Pfam PF00166 Chaperonin 10 Kd subunit 16 105 2.1E-26 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 SUPERFAMILY SSF50129 13 105 6.24E-25 T 11-10-2018 IPR011032 GroES-like superfamily AM943 e381e792f112eddaae776960d63c3f1e 107 PRINTS PR00297 10kDa chaperonin signature 16 31 6.1E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 PRINTS PR00297 10kDa chaperonin signature 93 106 6.1E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 PRINTS PR00297 10kDa chaperonin signature 37 58 6.1E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 PRINTS PR00297 10kDa chaperonin signature 72 84 6.1E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 SMART SM00883 15 106 8.8E-35 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AM943 e381e792f112eddaae776960d63c3f1e 107 Gene3D G3DSA:2.30.33.40 10 107 6.3E-27 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 AM852 f3db5094b3276895a20ec1344e3db6e5 661 Gene3D G3DSA:3.40.50.970 4 321 3.6E-108 T 11-10-2018 AM852 f3db5094b3276895a20ec1344e3db6e5 661 ProSitePatterns PS00802 Transketolase signature 2. 462 478 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM852 f3db5094b3276895a20ec1344e3db6e5 661 SUPERFAMILY SSF52922 529 657 4.06E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM852 f3db5094b3276895a20ec1344e3db6e5 661 SUPERFAMILY SSF52518 344 518 1.01E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AM852 f3db5094b3276895a20ec1344e3db6e5 661 TIGRFAM TIGR00232 tktlase_bact: transketolase 10 652 3.3E-235 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 AM852 f3db5094b3276895a20ec1344e3db6e5 661 Pfam PF02779 Transketolase, pyrimidine binding domain 350 518 1.3E-42 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM852 f3db5094b3276895a20ec1344e3db6e5 661 Pfam PF02780 Transketolase, C-terminal domain 542 649 5.1E-10 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AM852 f3db5094b3276895a20ec1344e3db6e5 661 SMART SM00861 349 520 1.8E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM852 f3db5094b3276895a20ec1344e3db6e5 661 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 317 1.0E-118 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM852 f3db5094b3276895a20ec1344e3db6e5 661 Gene3D G3DSA:3.40.50.920 533 656 5.9E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM852 f3db5094b3276895a20ec1344e3db6e5 661 SUPERFAMILY SSF52518 7 311 3.07E-108 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AM852 f3db5094b3276895a20ec1344e3db6e5 661 Gene3D G3DSA:3.40.50.970 323 523 2.8E-71 T 11-10-2018 AM852 f3db5094b3276895a20ec1344e3db6e5 661 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 AM563 b578853a4247894e306709e5856094f0 117 Gene3D G3DSA:3.30.1130.10 2 108 2.1E-16 T 11-10-2018 AM563 b578853a4247894e306709e5856094f0 117 SMART SM00905 5 109 2.0E-22 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM563 b578853a4247894e306709e5856094f0 117 Pfam PF02152 Dihydroneopterin aldolase 6 102 2.7E-17 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM563 b578853a4247894e306709e5856094f0 117 TIGRFAM TIGR00526 folB_dom: FolB domain 4 110 4.5E-18 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 AM563 b578853a4247894e306709e5856094f0 117 SUPERFAMILY SSF55620 5 110 6.12E-22 T 11-10-2018 AM250 26594be140311a1b0d8f5357bc0199bb 160 Pfam PF00177 Ribosomal protein S7p/S5e 1 153 6.0E-52 T 11-10-2018 IPR023798 Ribosomal protein S7 domain AM250 26594be140311a1b0d8f5357bc0199bb 160 Gene3D G3DSA:1.10.455.10 2 160 8.2E-48 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AM250 26594be140311a1b0d8f5357bc0199bb 160 PIRSF PIRSF002122 12 160 2.3E-48 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 AM250 26594be140311a1b0d8f5357bc0199bb 160 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 160 30.254 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM250 26594be140311a1b0d8f5357bc0199bb 160 SUPERFAMILY SSF47973 1 153 4.19E-49 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily AM250 26594be140311a1b0d8f5357bc0199bb 160 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 159 3.0E-52 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 TIGRFAM TIGR00416 sms: DNA repair protein RadA 9 449 9.5E-155 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 15 39 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 125 142 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 324 347 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 214 242 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 249 275 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 175 199 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 PRINTS PR01874 DNA repair protein radA signature 83 111 1.8E-85 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 Pfam PF13541 Subunit ChlI of Mg-chelatase 343 430 1.8E-8 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 Hamap MF_01498 DNA repair protein RadA [radA]. 26 456 40.275 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 SUPERFAMILY SSF52540 69 287 6.62E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 Gene3D G3DSA:3.30.230.10 333 455 1.5E-11 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 SMART SM00382 91 245 7.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 SUPERFAMILY SSF54211 256 451 2.39E-33 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 Gene3D G3DSA:3.40.50.300 69 280 1.4E-36 T 11-10-2018 AM157 c79f59ca53838dc5ceedc4ccdfe223c5 456 Pfam PF06745 KaiC 79 144 3.8E-9 T 11-10-2018 IPR014774 KaiC-like domain AM694 f6b328351e3bea0085166dfed05bb4df 250 Gene3D G3DSA:3.30.70.980 133 210 9.9E-38 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM694 f6b328351e3bea0085166dfed05bb4df 250 SUPERFAMILY SSF75625 3 233 5.76E-72 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM694 f6b328351e3bea0085166dfed05bb4df 250 Gene3D G3DSA:3.30.70.980 84 232 9.9E-38 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM694 f6b328351e3bea0085166dfed05bb4df 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 245 28.513 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM694 f6b328351e3bea0085166dfed05bb4df 250 Pfam PF01709 Transcriptional regulator 5 233 3.8E-76 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM694 f6b328351e3bea0085166dfed05bb4df 250 Gene3D G3DSA:1.10.10.200 1 81 1.1E-30 T 11-10-2018 IPR017856 Integrase-like, N-terminal AM694 f6b328351e3bea0085166dfed05bb4df 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 233 9.2E-75 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1018 423884bbf38b3ca67fca5677bb721e30 215 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 13 76 1.3E-10 T 11-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 AM1018 423884bbf38b3ca67fca5677bb721e30 215 SMART SM00530 13 69 1.3E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AM1018 423884bbf38b3ca67fca5677bb721e30 215 Gene3D G3DSA:2.10.109.10 106 214 1.1E-6 T 11-10-2018 AM1018 423884bbf38b3ca67fca5677bb721e30 215 Gene3D G3DSA:1.10.260.40 3 74 1.1E-10 T 11-10-2018 AM1018 423884bbf38b3ca67fca5677bb721e30 215 SUPERFAMILY SSF51306 123 213 4.84E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily AM1018 423884bbf38b3ca67fca5677bb721e30 215 SUPERFAMILY SSF47413 9 74 1.1E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 AM153 c5e1e0e92d7d060a8be4b423796e14e8 110 SUPERFAMILY SSF52833 6 107 1.94E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM153 c5e1e0e92d7d060a8be4b423796e14e8 110 PIRSF PIRSF005894 1 109 6.5E-49 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 AM153 c5e1e0e92d7d060a8be4b423796e14e8 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 7 103 2.1E-45 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related AM153 c5e1e0e92d7d060a8be4b423796e14e8 110 Gene3D G3DSA:3.40.30.10 9 104 2.8E-33 T 11-10-2018 AM153 c5e1e0e92d7d060a8be4b423796e14e8 110 Pfam PF00462 Glutaredoxin 19 83 2.5E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM1122 2063162f950119ec4b9fc7f8baf70c7a 249 Pfam PF05494 MlaC protein 84 225 1.3E-20 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC AM1122 2063162f950119ec4b9fc7f8baf70c7a 249 Gene3D G3DSA:3.10.450.710 67 232 1.5E-13 T 11-10-2018 AM296 a9ed4f122f674887f155044ae63e6dad 221 SUPERFAMILY SSF52540 12 195 3.23E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM296 a9ed4f122f674887f155044ae63e6dad 221 Gene3D G3DSA:3.40.50.300 32 147 1.6E-15 T 11-10-2018 AM296 a9ed4f122f674887f155044ae63e6dad 221 Gene3D G3DSA:1.10.8.60 150 216 1.4E-7 T 11-10-2018 AM296 a9ed4f122f674887f155044ae63e6dad 221 Pfam PF00308 Bacterial dnaA protein 82 193 2.8E-7 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA AM322 f9292227227ea916dc3bd74b4523fedd 757 SMART SM00843 696 757 1.3E-23 T 11-10-2018 IPR018541 FtsK gamma domain AM322 f9292227227ea916dc3bd74b4523fedd 757 Gene3D G3DSA:3.30.980.40 268 373 4.7E-25 T 11-10-2018 AM322 f9292227227ea916dc3bd74b4523fedd 757 Gene3D G3DSA:1.10.10.10 694 756 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM322 f9292227227ea916dc3bd74b4523fedd 757 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 153 1.0E-13 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region AM322 f9292227227ea916dc3bd74b4523fedd 757 Pfam PF09397 Ftsk gamma domain 698 755 4.2E-21 T 11-10-2018 IPR018541 FtsK gamma domain AM322 f9292227227ea916dc3bd74b4523fedd 757 SUPERFAMILY SSF46785 697 755 2.04E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily AM322 f9292227227ea916dc3bd74b4523fedd 757 Gene3D G3DSA:3.40.50.300 374 681 2.2E-109 T 11-10-2018 AM322 f9292227227ea916dc3bd74b4523fedd 757 SUPERFAMILY SSF52540 362 667 3.03E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM322 f9292227227ea916dc3bd74b4523fedd 757 Pfam PF01580 FtsK/SpoIIIE family 378 596 3.2E-62 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AM791 a2ba28c26ce53116ea8134ea4b858961 291 Gene3D G3DSA:1.10.286.20 206 250 4.3E-38 T 11-10-2018 AM791 a2ba28c26ce53116ea8134ea4b858961 291 SUPERFAMILY SSF54713 56 147 3.27E-13 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 SUPERFAMILY SSF54713 152 291 1.05E-33 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 SUPERFAMILY SSF46934 4 54 3.32E-15 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 AM791 a2ba28c26ce53116ea8134ea4b858961 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 53.942 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 Pfam PF00889 Elongation factor TS 70 291 2.3E-54 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 291 2.5E-70 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 Gene3D G3DSA:3.30.479.20 56 150 9.8E-15 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 Gene3D G3DSA:3.30.479.20 152 291 4.3E-38 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 AM791 a2ba28c26ce53116ea8134ea4b858961 291 Gene3D G3DSA:1.10.8.10 4 55 1.8E-20 T 11-10-2018 AM895 2a0e91001778e3fb26ebf017e3e035af 125 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 13 125 3.4E-26 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM895 2a0e91001778e3fb26ebf017e3e035af 125 Gene3D G3DSA:3.30.420.100 9 125 1.4E-29 T 11-10-2018 AM895 2a0e91001778e3fb26ebf017e3e035af 125 SUPERFAMILY SSF53137 12 122 3.14E-35 T 11-10-2018 AM895 2a0e91001778e3fb26ebf017e3e035af 125 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 9 125 21.648 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM895 2a0e91001778e3fb26ebf017e3e035af 125 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 12 125 1.6E-28 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1104 d9de571663fc72a744feabf63d13893f 674 Pfam PF01464 Transglycosylase SLT domain 520 617 5.3E-27 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 AM1104 d9de571663fc72a744feabf63d13893f 674 Gene3D G3DSA:1.25.40.10 201 412 9.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM1104 d9de571663fc72a744feabf63d13893f 674 SUPERFAMILY SSF48435 100 419 3.01E-16 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 AM1104 d9de571663fc72a744feabf63d13893f 674 Gene3D G3DSA:1.10.530.10 509 670 3.1E-40 T 11-10-2018 AM1104 d9de571663fc72a744feabf63d13893f 674 SUPERFAMILY SSF53955 510 655 1.0E-37 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily AM872 c529dfed5f9777f0aac15ee651abada4 274 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 29 273 1.7E-108 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 AM872 c529dfed5f9777f0aac15ee651abada4 274 Pfam PF00005 ABC transporter 45 199 5.4E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM872 c529dfed5f9777f0aac15ee651abada4 274 Gene3D G3DSA:3.40.50.300 24 273 3.3E-65 T 11-10-2018 AM872 c529dfed5f9777f0aac15ee651abada4 274 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM872 c529dfed5f9777f0aac15ee651abada4 274 SMART SM00382 52 247 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AM872 c529dfed5f9777f0aac15ee651abada4 274 SUPERFAMILY SSF52540 30 262 1.89E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1014 656e36c2b8c554e157cc85bc315d2885 379 SUPERFAMILY SSF55979 261 379 4.26E-28 T 11-10-2018 AM1014 656e36c2b8c554e157cc85bc315d2885 379 PIRSF PIRSF000804 12 379 6.8E-96 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AM1014 656e36c2b8c554e157cc85bc315d2885 379 SMART SM00480 28 375 1.6E-87 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AM1014 656e36c2b8c554e157cc85bc315d2885 379 Gene3D G3DSA:3.10.150.10 14 256 1.5E-98 T 11-10-2018 AM1014 656e36c2b8c554e157cc85bc315d2885 379 Gene3D G3DSA:3.70.10.10 148 377 1.5E-98 T 11-10-2018 AM1014 656e36c2b8c554e157cc85bc315d2885 379 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 14 129 3.0E-25 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AM1014 656e36c2b8c554e157cc85bc315d2885 379 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 260 378 2.9E-26 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 AM1014 656e36c2b8c554e157cc85bc315d2885 379 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 14 378 5.0E-83 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 AM1014 656e36c2b8c554e157cc85bc315d2885 379 SUPERFAMILY SSF55979 14 130 1.28E-20 T 11-10-2018 AM1014 656e36c2b8c554e157cc85bc315d2885 379 SUPERFAMILY SSF55979 138 258 2.07E-23 T 11-10-2018 AM1014 656e36c2b8c554e157cc85bc315d2885 379 Pfam PF02767 DNA polymerase III beta subunit, central domain 141 257 9.5E-28 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 AM803 046a0a0236a0e45da9e9565013988225 405 SUPERFAMILY SSF52021 46 186 3.53E-49 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM803 046a0a0236a0e45da9e9565013988225 405 Pfam PF00117 Glutamine amidotransferase class-I 220 398 1.5E-41 T 11-10-2018 IPR017926 Glutamine amidotransferase AM803 046a0a0236a0e45da9e9565013988225 405 Gene3D G3DSA:3.50.30.20 44 188 5.5E-49 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM803 046a0a0236a0e45da9e9565013988225 405 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 45 404 41.994 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM803 046a0a0236a0e45da9e9565013988225 405 SUPERFAMILY SSF52317 204 403 1.92E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00096 Glutamine amidotransferase superfamily signature 290 301 4.4E-12 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00096 Glutamine amidotransferase superfamily signature 375 388 4.4E-12 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 270 4.4E-12 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 Gene3D G3DSA:3.40.50.880 189 404 8.2E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM803 046a0a0236a0e45da9e9565013988225 405 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 47 173 3.0E-44 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM803 046a0a0236a0e45da9e9565013988225 405 SMART SM01097 45 174 1.4E-69 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM803 046a0a0236a0e45da9e9565013988225 405 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 47 400 2.4E-123 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00097 Anthranilate synthase component II signature 290 301 2.2E-7 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00097 Anthranilate synthase component II signature 261 270 2.2E-7 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00097 Anthranilate synthase component II signature 375 388 2.2E-7 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 218 232 5.6E-33 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 307 324 5.6E-33 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 272 5.6E-33 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 290 306 5.6E-33 T 11-10-2018 AM803 046a0a0236a0e45da9e9565013988225 405 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 332 343 5.6E-33 T 11-10-2018 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.6E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.6E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.6E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.6E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.6E-39 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 SUPERFAMILY SSF54919 1 141 3.4E-57 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 Gene3D G3DSA:3.30.70.141 1 141 2.9E-55 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.924 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 SMART SM00562 3 140 1.1E-76 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM1137 73ddf59cf7ccbbecd9b97def07770772 146 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.0E-53 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AM329 fa4782be06f6604212ea0cc0e03b91d5 158 Pfam PF02472 Biopolymer transport protein ExbD/TolR 24 144 2.7E-20 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 AM329 fa4782be06f6604212ea0cc0e03b91d5 158 Gene3D G3DSA:3.30.420.270 74 141 1.0E-16 T 11-10-2018 AM1015 74d77a87ec11fe62809734a555e15389 204 SUPERFAMILY SSF53098 13 190 7.59E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM1015 74d77a87ec11fe62809734a555e15389 204 Gene3D G3DSA:3.30.420.10 8 188 4.6E-42 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM1015 74d77a87ec11fe62809734a555e15389 204 Pfam PF01612 3'-5' exonuclease 18 168 3.3E-38 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM1015 74d77a87ec11fe62809734a555e15389 204 SMART SM00474 1 168 7.8E-35 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 AM1105 26dfad1860fa49b7ea66e45afcc9bd8c 228 Pfam PF02104 SURF1 family 24 211 4.3E-27 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM128 77c00a1c8c0df5a8ce2d68a722a8ca47 253 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 22 251 1.1E-90 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM128 77c00a1c8c0df5a8ce2d68a722a8ca47 253 Pfam PF00696 Amino acid kinase family 24 231 1.6E-27 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM128 77c00a1c8c0df5a8ce2d68a722a8ca47 253 SUPERFAMILY SSF53633 21 252 2.09E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM128 77c00a1c8c0df5a8ce2d68a722a8ca47 253 PIRSF PIRSF005650 18 253 2.6E-83 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 AM128 77c00a1c8c0df5a8ce2d68a722a8ca47 253 Gene3D G3DSA:3.40.1160.10 17 253 1.4E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM128 77c00a1c8c0df5a8ce2d68a722a8ca47 253 Hamap MF_01220_B Uridylate kinase [pyrH]. 20 252 41.883 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 AM285 e9a41b9e76d9f05f6294008d0255ed27 157 Pfam PF01722 BolA-like protein 74 145 2.7E-18 T 11-10-2018 IPR002634 BolA protein AM285 e9a41b9e76d9f05f6294008d0255ed27 157 SUPERFAMILY SSF82657 60 148 1.12E-19 T 11-10-2018 IPR036065 BolA-like superfamily AM285 e9a41b9e76d9f05f6294008d0255ed27 157 Gene3D G3DSA:3.30.300.90 61 150 5.8E-18 T 11-10-2018 AM038 25ccce4f85ce4eb8b578902fe6cbfe05 146 Pfam PF10947 Protein of unknown function (DUF2628) 36 112 2.2E-5 T 11-10-2018 IPR024399 Protein of unknown function DUF2628 AM1213 a313566006bbbbc3c76af2873d64338b 260 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 178 200 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM1213 a313566006bbbbc3c76af2873d64338b 260 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 49 258 1.2E-76 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM1213 a313566006bbbbc3c76af2873d64338b 260 SUPERFAMILY SSF51366 49 259 1.18E-61 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 AM1213 a313566006bbbbc3c76af2873d64338b 260 Gene3D G3DSA:3.20.20.70 42 259 2.1E-75 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM1213 a313566006bbbbc3c76af2873d64338b 260 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 76 90 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM1213 a313566006bbbbc3c76af2873d64338b 260 Pfam PF00834 Ribulose-phosphate 3 epimerase family 49 245 1.9E-70 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM1213 a313566006bbbbc3c76af2873d64338b 260 PIRSF PIRSF001461 43 260 3.4E-80 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 AM709 ed848ff1628f36da32ebe1b9daa2a8ba 146 SUPERFAMILY SSF89360 9 135 1.0E-19 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 AM1054 d8c857258d59734f335a25c0593eb180 124 Pfam PF04956 TrbC/VIRB2 family 5 102 8.8E-17 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM1351 add6411bd623607706ebd9771971ffc0 341 Pfam PF02780 Transketolase, C-terminal domain 207 329 1.4E-40 T 11-10-2018 IPR033248 Transketolase, C-terminal domain AM1351 add6411bd623607706ebd9771971ffc0 341 Gene3D G3DSA:3.40.50.920 204 338 1.3E-48 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM1351 add6411bd623607706ebd9771971ffc0 341 Pfam PF02779 Transketolase, pyrimidine binding domain 14 189 5.3E-50 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM1351 add6411bd623607706ebd9771971ffc0 341 Gene3D G3DSA:3.40.50.970 13 203 1.8E-86 T 11-10-2018 AM1351 add6411bd623607706ebd9771971ffc0 341 SUPERFAMILY SSF52922 201 337 7.85E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 AM1351 add6411bd623607706ebd9771971ffc0 341 SUPERFAMILY SSF52518 11 217 9.32E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold AM1351 add6411bd623607706ebd9771971ffc0 341 SMART SM00861 14 189 1.3E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain AM522 c5280e3604d971d3e41506140e7b0b70 369 Gene3D G3DSA:3.30.420.40 36 354 3.1E-125 T 11-10-2018 AM522 c5280e3604d971d3e41506140e7b0b70 369 Gene3D G3DSA:3.90.640.10 210 285 3.1E-125 T 11-10-2018 AM522 c5280e3604d971d3e41506140e7b0b70 369 SUPERFAMILY SSF53067 34 172 1.43E-36 T 11-10-2018 AM522 c5280e3604d971d3e41506140e7b0b70 369 Pfam PF06723 MreB/Mbl protein 34 361 4.4E-140 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 32 362 5.1E-146 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 Gene3D G3DSA:3.30.420.40 178 343 3.1E-125 T 11-10-2018 AM522 c5280e3604d971d3e41506140e7b0b70 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 211 231 8.1E-56 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 156 175 8.1E-56 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 93 116 8.1E-56 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 326 352 8.1E-56 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 91 8.1E-56 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 AM522 c5280e3604d971d3e41506140e7b0b70 369 SUPERFAMILY SSF53067 174 360 1.15E-45 T 11-10-2018 AM965 ddd914730779281a8f1a595916010e2f 233 Gene3D G3DSA:2.70.70.10 101 229 1.1E-23 T 11-10-2018 IPR011055 Duplicated hybrid motif AM965 ddd914730779281a8f1a595916010e2f 233 Pfam PF01551 Peptidase family M23 119 215 1.0E-19 T 11-10-2018 IPR016047 Peptidase M23 AM965 ddd914730779281a8f1a595916010e2f 233 SUPERFAMILY SSF51261 115 219 5.23E-25 T 11-10-2018 IPR011055 Duplicated hybrid motif AM1125 59319f69e0ca17927b28115550e59f0a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 5.2E-11 T 11-10-2018 AM1125 59319f69e0ca17927b28115550e59f0a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 191 214 5.2E-11 T 11-10-2018 AM1125 59319f69e0ca17927b28115550e59f0a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 5.2E-11 T 11-10-2018 AM1125 59319f69e0ca17927b28115550e59f0a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 5.2E-11 T 11-10-2018 AM1125 59319f69e0ca17927b28115550e59f0a 220 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 5.2E-11 T 11-10-2018 AM1125 59319f69e0ca17927b28115550e59f0a 220 Pfam PF03379 CcmB protein 5 214 4.7E-18 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM236 cd7495e7783e818cae9b272214316e8a 210 Pfam PF02630 SCO1/SenC 54 185 7.3E-34 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM236 cd7495e7783e818cae9b272214316e8a 210 SUPERFAMILY SSF52833 54 193 1.42E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM236 cd7495e7783e818cae9b272214316e8a 210 Gene3D G3DSA:3.40.30.10 50 196 1.4E-41 T 11-10-2018 AM442 0ea024425fe9d12ce1a447df03432df6 128 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 11.05 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM442 0ea024425fe9d12ce1a447df03432df6 128 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 14 53 1.1E-6 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AM442 0ea024425fe9d12ce1a447df03432df6 128 SUPERFAMILY SSF63562 14 76 2.09E-12 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM442 0ea024425fe9d12ce1a447df03432df6 128 SMART SM01409 10 60 1.2E-6 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM442 0ea024425fe9d12ce1a447df03432df6 128 Gene3D G3DSA:3.90.940.10 13 97 2.2E-11 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM442 0ea024425fe9d12ce1a447df03432df6 128 Pfam PF01192 RNA polymerase Rpb6 14 55 1.3E-7 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 AM042 90fe796e697020a73bb03e2f9571cd36 185 Pfam PF03602 Conserved hypothetical protein 95 2 178 9.8E-31 T 11-10-2018 AM042 90fe796e697020a73bb03e2f9571cd36 185 Gene3D G3DSA:3.40.50.150 1 182 1.4E-37 T 11-10-2018 AM042 90fe796e697020a73bb03e2f9571cd36 185 PIRSF PIRSF004553 1 182 3.2E-39 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 AM042 90fe796e697020a73bb03e2f9571cd36 185 SUPERFAMILY SSF53335 2 157 2.13E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM778 857c7f866bbd2b5dfa19eedea2b230d4 531 Pfam PF13609 Gram-negative porin 94 487 9.4E-13 T 11-10-2018 AM778 857c7f866bbd2b5dfa19eedea2b230d4 531 SUPERFAMILY SSF56935 116 531 9.42E-14 T 11-10-2018 AM1235 5709ae217c9ea31349e9e855bef23e16 241 SUPERFAMILY SSF69593 17 223 4.32E-25 T 11-10-2018 AM1235 5709ae217c9ea31349e9e855bef23e16 241 Pfam PF01553 Acyltransferase 77 191 2.8E-14 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM1235 5709ae217c9ea31349e9e855bef23e16 241 SMART SM00563 83 195 1.0E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 AM1304 0b1fba5143dc1fe2809f152319f43561 172 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 24 156 5.5E-37 T 11-10-2018 IPR006433 Prohead protease AM1304 0b1fba5143dc1fe2809f152319f43561 172 SUPERFAMILY SSF50789 28 145 2.83E-6 T 11-10-2018 AM1304 0b1fba5143dc1fe2809f152319f43561 172 Pfam PF04586 Caudovirus prohead serine protease 21 155 5.6E-35 T 11-10-2018 IPR006433 Prohead protease AM880.5 a86c1867621f0d5ca7439f0b39c8f2f5 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM880.5 a86c1867621f0d5ca7439f0b39c8f2f5 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 42 9.4E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM880.5 a86c1867621f0d5ca7439f0b39c8f2f5 44 Pfam PF00468 Ribosomal protein L34 1 43 5.2E-23 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM880.5 a86c1867621f0d5ca7439f0b39c8f2f5 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.881 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM880.5 a86c1867621f0d5ca7439f0b39c8f2f5 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 2.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM900 319dbeea1195af6badd80930533cc44d 105 Gene3D G3DSA:2.30.30.30 2 105 6.6E-28 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 AM900 319dbeea1195af6badd80930533cc44d 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 103 1.1E-26 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM900 319dbeea1195af6badd80930533cc44d 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM900 319dbeea1195af6badd80930533cc44d 105 SMART SM00739 4 31 6.7E-4 T 11-10-2018 IPR005824 KOW AM900 319dbeea1195af6badd80930533cc44d 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 44 103 1.9E-15 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM900 319dbeea1195af6badd80930533cc44d 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 98 15.928 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM900 319dbeea1195af6badd80930533cc44d 105 Pfam PF00467 KOW motif 8 37 7.4E-6 T 11-10-2018 IPR005824 KOW AM900 319dbeea1195af6badd80930533cc44d 105 SUPERFAMILY SSF50104 4 103 1.83E-24 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily AM741 2cd8f9c3e92f0152afef802bd25c2f12 422 Gene3D G3DSA:3.20.20.20 20 307 3.7E-77 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 AM741 2cd8f9c3e92f0152afef802bd25c2f12 422 Gene3D G3DSA:3.30.413.10 308 422 5.7E-35 T 11-10-2018 AM741 2cd8f9c3e92f0152afef802bd25c2f12 422 PIRSF PIRSF004640 17 422 2.0E-127 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM741 2cd8f9c3e92f0152afef802bd25c2f12 422 Pfam PF04551 GcpE protein 28 414 8.3E-96 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM741 2cd8f9c3e92f0152afef802bd25c2f12 422 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 21 416 25.029 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM741 2cd8f9c3e92f0152afef802bd25c2f12 422 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 25 413 6.1E-94 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 AM813 d24aee760d1aa4a1dbfbce8d44b0a657 878 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 476 692 2.2E-10 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM011 fb29da69faf2cfb2c09bf7cbb3401fa0 278 Pfam PF08245 Mur ligase middle domain 2 97 2.9E-8 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 AM011 fb29da69faf2cfb2c09bf7cbb3401fa0 278 Gene3D G3DSA:3.40.1190.10 1 114 6.0E-18 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM011 fb29da69faf2cfb2c09bf7cbb3401fa0 278 Gene3D G3DSA:3.90.190.20 115 271 1.6E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM011 fb29da69faf2cfb2c09bf7cbb3401fa0 278 Pfam PF02875 Mur ligase family, glutamate ligase domain 117 201 5.7E-19 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 AM011 fb29da69faf2cfb2c09bf7cbb3401fa0 278 SUPERFAMILY SSF53244 116 260 1.98E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 AM011 fb29da69faf2cfb2c09bf7cbb3401fa0 278 SUPERFAMILY SSF53623 2 114 1.98E-15 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 AM340 e9a81504702a24e39e2f9cccb188ad17 56 Gene3D G3DSA:2.20.28.120 1 56 4.3E-23 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM340 e9a81504702a24e39e2f9cccb188ad17 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 12.541 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM340 e9a81504702a24e39e2f9cccb188ad17 56 Pfam PF00471 Ribosomal protein L33 10 54 1.5E-12 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM340 e9a81504702a24e39e2f9cccb188ad17 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 55 2.2E-20 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM340 e9a81504702a24e39e2f9cccb188ad17 56 SUPERFAMILY SSF57829 4 54 4.27E-15 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 AM851 642ed90c27dd731b70d065ddd61aaf3c 84 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 79 6.7E-12 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 AM400 4b3ebaf813d2a76a4c5aaa2bec4dd304 401 Pfam PF07690 Major Facilitator Superfamily 21 359 7.7E-10 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM400 4b3ebaf813d2a76a4c5aaa2bec4dd304 401 Gene3D G3DSA:1.20.1250.20 4 394 8.1E-13 T 11-10-2018 AM400 4b3ebaf813d2a76a4c5aaa2bec4dd304 401 SUPERFAMILY SSF103473 38 394 1.44E-19 T 11-10-2018 IPR036259 MFS transporter superfamily AM318 94f2695b8900a85983ded224d1175940 340 Gene3D G3DSA:3.20.20.70 138 339 2.0E-60 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM318 94f2695b8900a85983ded224d1175940 340 Pfam PF02581 Thiamine monophosphate synthase 156 321 4.7E-54 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM318 94f2695b8900a85983ded224d1175940 340 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 146 339 21.058 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM318 94f2695b8900a85983ded224d1175940 340 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 157 331 2.6E-51 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM318 94f2695b8900a85983ded224d1175940 340 SUPERFAMILY SSF51391 145 337 3.79E-64 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM292 bc720daa0221ff05ddd95b1deed488d9 116 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 11 109 7.7E-17 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 AM292 bc720daa0221ff05ddd95b1deed488d9 116 Gene3D G3DSA:1.20.1300.10 2 112 9.6E-16 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM292 bc720daa0221ff05ddd95b1deed488d9 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 13 100 9.6E-9 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM292 bc720daa0221ff05ddd95b1deed488d9 116 SUPERFAMILY SSF81343 8 109 6.76E-18 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 AM984 b615e3eb33632e8ab0002c8078fefcfa 316 SUPERFAMILY SSF56349 14 299 1.12E-48 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AM984 b615e3eb33632e8ab0002c8078fefcfa 316 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 100 1.4E-12 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AM984 b615e3eb33632e8ab0002c8078fefcfa 316 Gene3D G3DSA:1.10.150.130 10 110 4.3E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal AM984 b615e3eb33632e8ab0002c8078fefcfa 316 Pfam PF00589 Phage integrase family 124 295 8.4E-37 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AM984 b615e3eb33632e8ab0002c8078fefcfa 316 Gene3D G3DSA:1.10.443.10 124 301 2.0E-49 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 AM483 4e72b1469cab891e3ed4a1253d24d7aa 324 PIRSF PIRSF000355 2 320 3.6E-103 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM483 4e72b1469cab891e3ed4a1253d24d7aa 324 Pfam PF00268 Ribonucleotide reductase, small chain 9 284 2.9E-74 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 AM483 4e72b1469cab891e3ed4a1253d24d7aa 324 Gene3D G3DSA:1.10.620.20 4 310 1.4E-91 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 AM483 4e72b1469cab891e3ed4a1253d24d7aa 324 SUPERFAMILY SSF47240 10 321 4.54E-87 T 11-10-2018 IPR009078 Ferritin-like superfamily AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 Gene3D G3DSA:3.40.50.620 52 363 2.3E-122 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 50 514 28.19 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 PRINTS PR00987 Glutamyl-tRNA synthetase signature 244 252 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 PRINTS PR00987 Glutamyl-tRNA synthetase signature 70 81 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 PRINTS PR00987 Glutamyl-tRNA synthetase signature 228 238 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 PRINTS PR00987 Glutamyl-tRNA synthetase signature 56 68 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 PRINTS PR00987 Glutamyl-tRNA synthetase signature 85 98 5.8E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 53 352 8.6E-91 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 SUPERFAMILY SSF52374 53 344 2.95E-101 T 11-10-2018 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 Gene3D G3DSA:1.10.10.350 415 514 3.0E-15 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 53 514 2.2E-141 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM775 3789cdbc3e09a1b2c49371cedceaf97f 516 SUPERFAMILY SSF48163 348 514 1.44E-29 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 Pfam PF00406 Adenylate kinase 10 189 1.6E-36 T 11-10-2018 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 Gene3D G3DSA:3.40.50.300 3 215 1.1E-57 T 11-10-2018 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 Hamap MF_00235 Adenylate kinase [adk]. 6 212 32.015 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 SUPERFAMILY SSF52540 6 212 4.05E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 PRINTS PR00094 Adenylate kinase signature 38 52 9.6E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 PRINTS PR00094 Adenylate kinase signature 85 101 9.6E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 PRINTS PR00094 Adenylate kinase signature 9 22 9.6E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 PRINTS PR00094 Adenylate kinase signature 161 176 9.6E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 ProSitePatterns PS00113 Adenylate kinase signature. 85 96 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 AM891 7cd1cb07261275ebb74fc8de442c0f3d 216 TIGRFAM TIGR01351 adk: adenylate kinase 7 211 1.1E-57 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 AM597 f6f2ea6fc3869201444f0edc2fad93a4 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 102 18.459 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM597 f6f2ea6fc3869201444f0edc2fad93a4 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 100 8.9E-20 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM597 f6f2ea6fc3869201444f0edc2fad93a4 102 SUPERFAMILY SSF141091 3 101 6.8E-27 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM597 f6f2ea6fc3869201444f0edc2fad93a4 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 3 100 8.7E-28 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1347 f7102abf4452e54f0717615a5073eded 400 Gene3D G3DSA:3.40.630.10 28 381 2.0E-98 T 11-10-2018 AM1347 f7102abf4452e54f0717615a5073eded 400 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 120 154 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AM1347 f7102abf4452e54f0717615a5073eded 400 SUPERFAMILY SSF55031 199 305 3.89E-22 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain AM1347 f7102abf4452e54f0717615a5073eded 400 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 27 392 1.1E-113 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM1347 f7102abf4452e54f0717615a5073eded 400 SUPERFAMILY SSF53187 14 392 1.44E-56 T 11-10-2018 AM1347 f7102abf4452e54f0717615a5073eded 400 Gene3D G3DSA:3.30.70.360 199 312 2.0E-98 T 11-10-2018 AM1347 f7102abf4452e54f0717615a5073eded 400 Pfam PF07687 Peptidase dimerisation domain 195 301 3.2E-17 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain AM1347 f7102abf4452e54f0717615a5073eded 400 Pfam PF01546 Peptidase family M20/M25/M40 87 390 1.5E-35 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 AM1347 f7102abf4452e54f0717615a5073eded 400 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 23 394 44.826 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 AM1335 2897ce1c21016e8ec65a3a670082bf44 185 Gene3D G3DSA:3.40.50.1950 1 181 1.3E-54 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM1335 2897ce1c21016e8ec65a3a670082bf44 185 Pfam PF02441 Flavoprotein 1 172 1.6E-43 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 AM1335 2897ce1c21016e8ec65a3a670082bf44 185 SUPERFAMILY SSF52507 1 175 1.7E-54 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 AM1301 78647cde5f260b4e90482137827e9362 265 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 1 263 3.1E-60 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 AM1301 78647cde5f260b4e90482137827e9362 265 SUPERFAMILY SSF51726 1 264 1.38E-52 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM1301 78647cde5f260b4e90482137827e9362 265 Gene3D G3DSA:3.20.20.210 1 265 1.5E-64 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 Gene3D G3DSA:3.40.50.300 92 369 1.9E-112 T 11-10-2018 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 Gene3D G3DSA:1.10.1140.10 370 486 2.2E-56 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 SUPERFAMILY SSF50615 17 90 8.63E-20 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 17 485 1.3E-239 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 SMART SM00382 159 352 1.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 358 367 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 Gene3D G3DSA:2.40.10.170 16 91 1.7E-23 T 11-10-2018 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 SUPERFAMILY SSF47917 370 484 2.35E-51 T 11-10-2018 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 20 89 1.2E-16 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 SUPERFAMILY SSF52540 94 371 1.36E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 147 367 1.1E-61 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 AM666 44d7d72f2ebb0845d56518fbc92d3bbc 486 Hamap MF_01347 ATP synthase subunit beta [atpB]. 15 485 55.251 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 89 112 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 Pfam PF00675 Insulinase (Peptidase family M16) 78 208 7.7E-24 T 11-10-2018 IPR011765 Peptidase M16, N-terminal AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 Gene3D G3DSA:3.30.830.10 55 272 5.0E-67 T 11-10-2018 AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 SUPERFAMILY SSF63411 56 259 8.0E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 Pfam PF05193 Peptidase M16 inactive domain 222 403 7.6E-20 T 11-10-2018 IPR007863 Peptidase M16, C-terminal AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 SUPERFAMILY SSF63411 296 463 2.5E-17 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AM1080 d10d8591196a3359c38b8f1e5cf060a8 473 Gene3D G3DSA:3.30.830.10 278 471 9.5E-23 T 11-10-2018 AM1210 b6a5a7adb04cc2de801cb6229aa4f707 239 SUPERFAMILY SSF52540 4 227 5.45E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1210 b6a5a7adb04cc2de801cb6229aa4f707 239 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM1210 b6a5a7adb04cc2de801cb6229aa4f707 239 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 32 45 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 AM1210 b6a5a7adb04cc2de801cb6229aa4f707 239 Gene3D G3DSA:3.40.50.300 3 238 8.0E-67 T 11-10-2018 AM1210 b6a5a7adb04cc2de801cb6229aa4f707 239 SMART SM00382 28 213 1.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain AM1210 b6a5a7adb04cc2de801cb6229aa4f707 239 Pfam PF00005 ABC transporter 19 164 9.4E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM161 56d01cbc42f975121de6c8d5fe27f15f 127 Pfam PF01250 Ribosomal protein S6 22 110 1.9E-21 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161 56d01cbc42f975121de6c8d5fe27f15f 127 Gene3D G3DSA:3.30.70.60 18 119 1.4E-21 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AM161 56d01cbc42f975121de6c8d5fe27f15f 127 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 19 113 17.04 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AM161 56d01cbc42f975121de6c8d5fe27f15f 127 TIGRFAM TIGR00166 S6: ribosomal protein bS6 22 112 1.0E-17 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM161 56d01cbc42f975121de6c8d5fe27f15f 127 SUPERFAMILY SSF54995 20 122 2.88E-28 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 246 300 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 SUPERFAMILY SSF81442 12 520 2.35E-207 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 16 519 3.1E-210 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 15 40 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 427 448 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 335 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 62 85 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 164 182 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 193 212 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 290 305 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 244 265 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 377 396 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 PRINTS PR01165 Cytochrome c oxidase subunit I signature 349 367 1.9E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 24 467 2.8E-144 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1008 dabfb92d6593af998f5cb20bce681bbd 521 Gene3D G3DSA:1.20.210.10 13 521 1.9E-223 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM273 8cb6c78b77363995a17080a32368080a 389 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 324 344 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM273 8cb6c78b77363995a17080a32368080a 389 Pfam PF01180 Dihydroorotate dehydrogenase 79 372 2.4E-86 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AM273 8cb6c78b77363995a17080a32368080a 389 Gene3D G3DSA:3.20.20.70 38 389 1.7E-123 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM273 8cb6c78b77363995a17080a32368080a 389 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 114 133 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 AM273 8cb6c78b77363995a17080a32368080a 389 SUPERFAMILY SSF51395 45 388 3.36E-94 T 11-10-2018 AM273 8cb6c78b77363995a17080a32368080a 389 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 47 387 2.2E-112 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 AM441 a87d6cdf60aec14247407a712080dbe5 221 Gene3D G3DSA:3.30.1370.110 101 221 5.5E-31 T 11-10-2018 AM441 a87d6cdf60aec14247407a712080dbe5 221 SUPERFAMILY SSF160443 131 216 7.06E-13 T 11-10-2018 IPR036063 Smr domain superfamily AM441 a87d6cdf60aec14247407a712080dbe5 221 Pfam PF01713 Smr domain 133 216 1.9E-17 T 11-10-2018 IPR002625 Smr domain AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Pfam PF14450 Cell division protein FtsA 224 387 6.8E-19 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Pfam PF02491 SHS2 domain inserted in FTSA 104 178 3.4E-10 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Gene3D G3DSA:3.30.1490.110 102 185 3.3E-81 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 PIRSF PIRSF003101 18 420 4.5E-98 T 11-10-2018 IPR020823 Cell division protein FtsA AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Gene3D G3DSA:3.90.640.10 251 315 3.3E-81 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Gene3D G3DSA:3.30.420.40 213 364 3.3E-81 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Hamap MF_02033 Cell division protein FtsA [ftsA]. 23 422 21.992 T 11-10-2018 IPR020823 Cell division protein FtsA AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 SUPERFAMILY SSF53067 214 390 7.41E-37 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 SUPERFAMILY SSF53067 26 213 1.06E-35 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 Gene3D G3DSA:3.30.420.40 30 385 3.3E-81 T 11-10-2018 AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 27 388 4.7E-83 T 11-10-2018 IPR020823 Cell division protein FtsA AM1115 f90a7a1906d9bcc593bc081f67697e5f 424 SMART SM00842 27 212 1.3E-57 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 AM435 39ef351ed2aafc21df9fae9bbf51af75 296 SUPERFAMILY SSF52540 22 168 1.07E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM435 39ef351ed2aafc21df9fae9bbf51af75 296 Pfam PF13177 DNA polymerase III, delta subunit 28 151 4.5E-21 T 11-10-2018 AM435 39ef351ed2aafc21df9fae9bbf51af75 296 Gene3D G3DSA:3.40.50.300 14 146 2.5E-31 T 11-10-2018 AM131 eee47f44a1a107aeb6f5f087f404632e 232 Pfam PF01255 Putative undecaprenyl diphosphate synthase 15 231 1.2E-71 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM131 eee47f44a1a107aeb6f5f087f404632e 232 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 8 231 2.9E-74 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM131 eee47f44a1a107aeb6f5f087f404632e 232 SUPERFAMILY SSF64005 6 226 3.14E-74 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AM131 eee47f44a1a107aeb6f5f087f404632e 232 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 8 232 34.934 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 AM131 eee47f44a1a107aeb6f5f087f404632e 232 Gene3D G3DSA:3.40.1180.10 1 232 5.8E-83 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 AM1309 462f570d1c58162cff2d52a885621cd6 123 Pfam PF11953 Domain of unknown function (DUF3470) 81 120 6.7E-13 T 11-10-2018 IPR022569 Ferredoxin, C-terminal AM1309 462f570d1c58162cff2d52a885621cd6 123 Pfam PF00037 4Fe-4S binding domain 34 55 1.9E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AM1309 462f570d1c58162cff2d52a885621cd6 123 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AM1309 462f570d1c58162cff2d52a885621cd6 123 Gene3D G3DSA:3.30.70.20 2 121 2.8E-24 T 11-10-2018 AM1309 462f570d1c58162cff2d52a885621cd6 123 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AM1309 462f570d1c58162cff2d52a885621cd6 123 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AM1309 462f570d1c58162cff2d52a885621cd6 123 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.4E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 AM1309 462f570d1c58162cff2d52a885621cd6 123 SUPERFAMILY SSF54862 3 69 5.12E-23 T 11-10-2018 AM731 a7927376991588e99abb66317c1ea2f0 781 Gene3D G3DSA:3.40.50.300 464 678 2.0E-72 T 11-10-2018 AM731 a7927376991588e99abb66317c1ea2f0 781 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 SUPERFAMILY SSF81923 15 153 3.66E-43 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM731 a7927376991588e99abb66317c1ea2f0 781 Pfam PF07724 AAA domain (Cdc48 subfamily) 510 672 7.0E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 Gene3D G3DSA:1.10.8.60 376 462 1.7E-28 T 11-10-2018 AM731 a7927376991588e99abb66317c1ea2f0 781 Gene3D G3DSA:1.10.1780.10 14 153 3.2E-26 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 AM731 a7927376991588e99abb66317c1ea2f0 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.2E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 619 633 1.2E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 515 533 1.2E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 557 575 1.2E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 SUPERFAMILY SSF52540 461 741 6.12E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM731 a7927376991588e99abb66317c1ea2f0 781 SMART SM01086 679 768 1.1E-15 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM731 a7927376991588e99abb66317c1ea2f0 781 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 679 759 8.0E-14 T 11-10-2018 IPR019489 Clp ATPase, C-terminal AM731 a7927376991588e99abb66317c1ea2f0 781 Gene3D G3DSA:1.10.8.60 679 780 3.8E-18 T 11-10-2018 AM731 a7927376991588e99abb66317c1ea2f0 781 SMART SM00382 511 662 5.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AM731 a7927376991588e99abb66317c1ea2f0 781 SMART SM00382 231 377 3.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain AM731 a7927376991588e99abb66317c1ea2f0 781 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 349 7.1E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM731 a7927376991588e99abb66317c1ea2f0 781 Gene3D G3DSA:3.40.50.300 181 375 3.4E-58 T 11-10-2018 AM731 a7927376991588e99abb66317c1ea2f0 781 SUPERFAMILY SSF52540 194 437 4.95E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM731 a7927376991588e99abb66317c1ea2f0 781 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 542 560 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 AM075 3dfd508f1599d742714fa9fbba92f5ad 404 Pfam PF01617 Surface antigen 43 404 6.5E-43 T 11-10-2018 IPR002566 Surface antigen msp4 AM075 3dfd508f1599d742714fa9fbba92f5ad 404 Gene3D G3DSA:2.40.160.20 225 371 3.4E-6 T 11-10-2018 AM075 3dfd508f1599d742714fa9fbba92f5ad 404 SUPERFAMILY SSF56925 45 404 3.66E-12 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM911 59a73c5144f22f2dd8428d895ce702bc 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 2.8E-66 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM911 59a73c5144f22f2dd8428d895ce702bc 208 Gene3D G3DSA:3.40.1370.10 1 207 1.6E-65 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AM911 59a73c5144f22f2dd8428d895ce702bc 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.434 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM911 59a73c5144f22f2dd8428d895ce702bc 208 SUPERFAMILY SSF52166 1 205 4.58E-68 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 AM911 59a73c5144f22f2dd8428d895ce702bc 208 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 3.1E-60 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AM1173 256de25de1dab4b970b778fe418d8ac8 174 Pfam PF03449 Transcription elongation factor, N-terminal 18 86 3.5E-28 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 SUPERFAMILY SSF54534 93 173 8.76E-17 T 11-10-2018 AM1173 256de25de1dab4b970b778fe418d8ac8 174 PIRSF PIRSF006092 13 173 3.9E-43 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 AM1173 256de25de1dab4b970b778fe418d8ac8 174 SUPERFAMILY SSF46557 16 88 1.83E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 18 172 1.2E-50 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 Gene3D G3DSA:3.10.50.30 88 174 1.4E-23 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 93 172 5.6E-26 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 30 60 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 Gene3D G3DSA:1.10.287.180 15 87 3.3E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 AM1173 256de25de1dab4b970b778fe418d8ac8 174 Hamap MF_00105 Transcription elongation factor GreA [greA]. 15 172 28.054 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 AM295 123b6f61616ac871de3403410f5fcc39 260 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 1 249 3.6E-79 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 AM295 123b6f61616ac871de3403410f5fcc39 260 Gene3D G3DSA:3.40.1190.20 1 257 2.0E-84 T 11-10-2018 IPR029056 Ribokinase-like AM295 123b6f61616ac871de3403410f5fcc39 260 Pfam PF08543 Phosphomethylpyrimidine kinase 8 247 1.5E-81 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 AM295 123b6f61616ac871de3403410f5fcc39 260 SUPERFAMILY SSF53613 1 252 1.49E-67 T 11-10-2018 IPR029056 Ribokinase-like AM301 037f1e7de876e089c3ee60e290d4eaaf 178 ProSitePatterns PS00632 Ribosomal protein S4 signature. 65 89 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 8 66 2.4E-10 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 SMART SM00363 67 131 8.8E-18 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 SUPERFAMILY SSF55174 8 177 1.96E-47 T 11-10-2018 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 Pfam PF01479 S4 domain 68 114 1.1E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 Gene3D G3DSA:1.10.1050.10 8 177 4.2E-53 T 11-10-2018 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 Gene3D G3DSA:3.10.290.10 66 161 4.2E-53 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 2 178 22.58 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM301 037f1e7de876e089c3ee60e290d4eaaf 178 SMART SM01390 1 66 7.8E-5 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 AM561 42c115557336b26cbcbeac819b3cd0ed 341 Gene3D G3DSA:3.30.420.40 7 323 1.0E-117 T 11-10-2018 AM561 42c115557336b26cbcbeac819b3cd0ed 341 Gene3D G3DSA:3.30.420.40 131 301 1.0E-117 T 11-10-2018 AM561 42c115557336b26cbcbeac819b3cd0ed 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 2.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 271 280 2.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 2.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 2.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 2.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 2.7E-46 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 Pfam PF00814 Glycoprotease family 27 315 3.2E-91 T 11-10-2018 IPR000905 Gcp-like domain AM561 42c115557336b26cbcbeac819b3cd0ed 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 321 3.1E-121 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AM561 42c115557336b26cbcbeac819b3cd0ed 341 SUPERFAMILY SSF53067 104 317 2.81E-37 T 11-10-2018 AM561 42c115557336b26cbcbeac819b3cd0ed 341 SUPERFAMILY SSF53067 7 123 4.08E-28 T 11-10-2018 AM561 42c115557336b26cbcbeac819b3cd0ed 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 314 2.1E-97 T 11-10-2018 IPR017861 Kae1/TsaD family AM561 42c115557336b26cbcbeac819b3cd0ed 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 339 58.699 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 Gene3D G3DSA:3.90.1150.10 19 382 5.3E-122 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 Gene3D G3DSA:3.40.640.10 49 294 5.3E-122 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 PIRSF PIRSF000521 164 392 1.3E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 PIRSF PIRSF000521 9 175 3.1E-12 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 Pfam PF00202 Aminotransferase class-III 15 389 6.7E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 7 389 9.3E-125 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 AM326 fc7b8c8248ffe08ee0385cae3df09b2f 392 SUPERFAMILY SSF53383 7 391 8.78E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM1231 bc113644eb7d3b180c22ba15994b5c93 285 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 22 268 4.2E-65 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM1231 bc113644eb7d3b180c22ba15994b5c93 285 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 19 274 17.381 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM1231 bc113644eb7d3b180c22ba15994b5c93 285 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 13 274 7.1E-63 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 AM1114 c82028eb4388b35c7d89cba9188450b7 165 Pfam PF00430 ATP synthase B/B' CF(0) 11 135 3.8E-6 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AM1218 44a1b31b38c6d61873d622ded1b3e7b6 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 9 356 1.3E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal AM1218 44a1b31b38c6d61873d622ded1b3e7b6 371 Gene3D G3DSA:3.40.50.300 12 346 8.6E-65 T 11-10-2018 AM1218 44a1b31b38c6d61873d622ded1b3e7b6 371 SUPERFAMILY SSF52540 9 361 3.2E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1218 44a1b31b38c6d61873d622ded1b3e7b6 371 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AM1218 44a1b31b38c6d61873d622ded1b3e7b6 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 61.327 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AM1218 44a1b31b38c6d61873d622ded1b3e7b6 371 Gene3D G3DSA:1.20.1050.90 125 311 8.6E-65 T 11-10-2018 AM056 8064e97e66b0e5a5c3e463805f7db55f 252 Pfam PF00106 short chain dehydrogenase 23 202 1.2E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM056 8064e97e66b0e5a5c3e463805f7db55f 252 Gene3D G3DSA:3.40.50.720 17 250 8.8E-33 T 11-10-2018 AM056 8064e97e66b0e5a5c3e463805f7db55f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM056 8064e97e66b0e5a5c3e463805f7db55f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM056 8064e97e66b0e5a5c3e463805f7db55f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 22 39 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM056 8064e97e66b0e5a5c3e463805f7db55f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM056 8064e97e66b0e5a5c3e463805f7db55f 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 2.8E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM056 8064e97e66b0e5a5c3e463805f7db55f 252 SUPERFAMILY SSF51735 20 202 1.55E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM1202 05087083e463d33d457281bc1a66b00d 410 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 248 257 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 AM1202 05087083e463d33d457281bc1a66b00d 410 SUPERFAMILY SSF53383 8 401 2.89E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM1202 05087083e463d33d457281bc1a66b00d 410 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 10 404 2.2E-175 T 11-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 AM1202 05087083e463d33d457281bc1a66b00d 410 Gene3D G3DSA:3.40.640.10 69 301 1.7E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM1202 05087083e463d33d457281bc1a66b00d 410 Gene3D G3DSA:3.90.1150.10 23 391 1.7E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM1202 05087083e463d33d457281bc1a66b00d 410 Pfam PF00155 Aminotransferase class I and II 54 392 1.4E-62 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM414 2254b9b6ecb083c6b887580b0434a113 456 Gene3D G3DSA:1.20.1250.20 25 429 1.4E-36 T 11-10-2018 AM414 2254b9b6ecb083c6b887580b0434a113 456 SUPERFAMILY SSF103473 27 427 2.49E-34 T 11-10-2018 IPR036259 MFS transporter superfamily AM414 2254b9b6ecb083c6b887580b0434a113 456 Pfam PF07690 Major Facilitator Superfamily 72 361 2.2E-9 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AM242 5f306848cca3d1d24dec4d0ae792bee2 218 Pfam PF08511 COQ9 122 197 6.5E-23 T 11-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 AM242 5f306848cca3d1d24dec4d0ae792bee2 218 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 18 201 2.1E-39 T 11-10-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 AM242 5f306848cca3d1d24dec4d0ae792bee2 218 Gene3D G3DSA:1.10.357.10 11 194 4.6E-13 T 11-10-2018 AM960 acb834f0826c1e7d4a62f31affff559b 260 SUPERFAMILY SSF52317 2 259 1.62E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM960 acb834f0826c1e7d4a62f31affff559b 260 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 3 259 1.6E-59 T 11-10-2018 AM960 acb834f0826c1e7d4a62f31affff559b 260 SMART SM01211 1 259 3.9E-94 T 11-10-2018 AM960 acb834f0826c1e7d4a62f31affff559b 260 PIRSF PIRSF001586 1 260 3.0E-67 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 AM960 acb834f0826c1e7d4a62f31affff559b 260 Gene3D G3DSA:3.40.50.880 1 260 1.4E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM998 9f7f78ccab9c84a929deb317f0e6ed74 189 SUPERFAMILY SSF56235 8 187 1.2E-53 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM998 9f7f78ccab9c84a929deb317f0e6ed74 189 Gene3D G3DSA:3.60.20.10 7 188 2.8E-66 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal AM998 9f7f78ccab9c84a929deb317f0e6ed74 189 Pfam PF00227 Proteasome subunit 11 186 3.5E-23 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 AM998 9f7f78ccab9c84a929deb317f0e6ed74 189 PIRSF PIRSF039093 5 189 4.7E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM998 9f7f78ccab9c84a929deb317f0e6ed74 189 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 187 1.8E-78 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM998 9f7f78ccab9c84a929deb317f0e6ed74 189 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 187 38.435 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 AM005 4661bab6074a2db5994f85255d2dec70 356 Pfam PF01098 Cell cycle protein 13 354 2.6E-89 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM005 4661bab6074a2db5994f85255d2dec70 356 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 7 351 7.7E-109 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 188 531 3.1E-28 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 183 203 8.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 281 300 8.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 415 432 8.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 438 459 8.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 369 388 8.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 483 501 8.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 Gene3D G3DSA:1.10.1370.30 39 533 5.4E-94 T 11-10-2018 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 PIRSF PIRSF006615 40 534 5.3E-72 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 AM853 da842e7bb6bdedc7ef3305ee0e28f80f 534 SUPERFAMILY SSF55486 39 532 3.98E-54 T 11-10-2018 AM334 5358ea6486d3cd265e02590cf93a835c 377 Gene3D G3DSA:1.10.10.10 296 374 6.2E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM334 5358ea6486d3cd265e02590cf93a835c 377 Pfam PF02481 DNA recombination-mediator protein A 75 282 9.3E-68 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM334 5358ea6486d3cd265e02590cf93a835c 377 SUPERFAMILY SSF102405 85 291 2.87E-35 T 11-10-2018 AM334 5358ea6486d3cd265e02590cf93a835c 377 Gene3D G3DSA:3.40.50.450 2 293 2.4E-92 T 11-10-2018 AM334 5358ea6486d3cd265e02590cf93a835c 377 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 290 1.4E-63 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 AM113 947dfd0ea6a39061fa0b54691f80bd8d 217 ProDom PD111165 RP434 53 214 0.001 T 11-10-2018 AM113 947dfd0ea6a39061fa0b54691f80bd8d 217 Pfam PF04280 Tim44-like domain 72 216 1.1E-38 T 11-10-2018 IPR007379 Tim44-like domain AM113 947dfd0ea6a39061fa0b54691f80bd8d 217 SUPERFAMILY SSF54427 60 215 3.86E-40 T 11-10-2018 IPR032710 NTF2-like domain superfamily AM113 947dfd0ea6a39061fa0b54691f80bd8d 217 SMART SM00978 71 217 2.0E-45 T 11-10-2018 IPR007379 Tim44-like domain AM113 947dfd0ea6a39061fa0b54691f80bd8d 217 PIRSF PIRSF031890 1 217 9.6E-74 T 11-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related AM113 947dfd0ea6a39061fa0b54691f80bd8d 217 Gene3D G3DSA:3.10.450.240 50 217 4.4E-30 T 11-10-2018 AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 Pfam PF00580 UvrD/REP helicase N-terminal domain 37 297 1.4E-67 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 Gene3D G3DSA:3.40.50.300 37 299 4.7E-88 T 11-10-2018 AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 Gene3D G3DSA:1.10.10.160 136 215 4.7E-88 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 SUPERFAMILY SSF52540 30 658 1.6E-159 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 Pfam PF13361 UvrD-like helicase C-terminal domain 304 630 1.7E-64 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 Gene3D G3DSA:3.40.50.300 306 649 1.4E-108 T 11-10-2018 AM369 ed157aaee6aa69a3e5ffd1b441168fa5 671 Gene3D G3DSA:1.10.486.10 406 562 1.4E-108 T 11-10-2018 AM912 41ea0129122a4daf6d7e359d40f17158 232 Gene3D G3DSA:2.40.30.10 132 214 3.7E-15 T 11-10-2018 AM912 41ea0129122a4daf6d7e359d40f17158 232 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 208 7.1E-74 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM912 41ea0129122a4daf6d7e359d40f17158 232 Gene3D G3DSA:2.40.50.620 37 100 2.7E-6 T 11-10-2018 AM912 41ea0129122a4daf6d7e359d40f17158 232 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site AM912 41ea0129122a4daf6d7e359d40f17158 232 Pfam PF00297 Ribosomal protein L3 101 185 1.0E-12 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM912 41ea0129122a4daf6d7e359d40f17158 232 SUPERFAMILY SSF50447 6 216 4.24E-66 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM093 aa01a7dca5611c362eeaf067edb8befc 106 Gene3D G3DSA:3.30.160.190 11 84 7.3E-27 T 11-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM093 aa01a7dca5611c362eeaf067edb8befc 106 Pfam PF04800 ETC complex I subunit conserved region 12 104 5.4E-30 T 11-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 AM333 31185734481e9072d1fc5e195f7403ce 221 Gene3D G3DSA:2.30.42.20 36 220 1.8E-51 T 11-10-2018 AM333 31185734481e9072d1fc5e195f7403ce 221 Gene3D G3DSA:3.30.1370.100 76 175 1.8E-51 T 11-10-2018 AM333 31185734481e9072d1fc5e195f7403ce 221 SUPERFAMILY SSF118116 30 220 6.15E-48 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily AM333 31185734481e9072d1fc5e195f7403ce 221 Pfam PF08676 MutL C terminal dimerisation domain 30 178 1.5E-38 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM333 31185734481e9072d1fc5e195f7403ce 221 SMART SM00853 34 178 4.5E-40 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 SUPERFAMILY SSF55681 100 341 6.51E-76 T 11-10-2018 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 SUPERFAMILY SSF46589 23 107 1.99E-13 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 Pfam PF01409 tRNA synthetases class II core domain (F) 100 339 1.5E-99 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 15 340 43.657 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 46 339 5.6E-102 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 Gene3D G3DSA:3.30.930.10 14 342 5.3E-112 T 11-10-2018 AM055 6b45d026ef99f0abf31eeaee91ee5a33 351 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 27 95 1.3E-14 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AM650 c1098c35cd19b175e9df07cb1a6dad8f 117 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 93 7.9E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AM650 c1098c35cd19b175e9df07cb1a6dad8f 117 Gene3D G3DSA:3.10.20.30 1 116 2.9E-44 T 11-10-2018 IPR012675 Beta-grasp domain superfamily AM650 c1098c35cd19b175e9df07cb1a6dad8f 117 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM650 c1098c35cd19b175e9df07cb1a6dad8f 117 PRINTS PR00355 Adrenodoxin signature 39 49 4.8E-5 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM650 c1098c35cd19b175e9df07cb1a6dad8f 117 PRINTS PR00355 Adrenodoxin signature 84 92 4.8E-5 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 AM650 c1098c35cd19b175e9df07cb1a6dad8f 117 SUPERFAMILY SSF54292 1 104 5.77E-31 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 79 9.9E-25 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 1.5E-24 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 173 30.902 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 SUPERFAMILY SSF54211 85 163 3.54E-22 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 168 1.9E-57 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 SUPERFAMILY SSF54768 14 81 1.99E-20 T 11-10-2018 AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 Gene3D G3DSA:3.30.230.10 80 173 3.0E-31 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM894 b2699c485e7f6c7ada7130a6e3ba421b 174 Gene3D G3DSA:3.30.160.20 7 78 4.3E-27 T 11-10-2018 AM406 45789adc005582e1830aa67e4ec139c1 383 SUPERFAMILY SSF56563 99 376 4.32E-64 T 11-10-2018 AM406 45789adc005582e1830aa67e4ec139c1 383 Pfam PF05065 Phage capsid family 105 375 2.5E-74 T 11-10-2018 IPR024455 Phage capsid AM406 45789adc005582e1830aa67e4ec139c1 383 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 24 375 2.6E-92 T 11-10-2018 IPR024455 Phage capsid AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 PRINTS PR00160 Glutaredoxin signature 46 59 7.1E-18 T 11-10-2018 IPR014025 Glutaredoxin subgroup AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 PRINTS PR00160 Glutaredoxin signature 60 73 7.1E-18 T 11-10-2018 IPR014025 Glutaredoxin subgroup AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 PRINTS PR00160 Glutaredoxin signature 4 22 7.1E-18 T 11-10-2018 IPR014025 Glutaredoxin subgroup AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 SUPERFAMILY SSF52833 2 79 6.6E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 ProSitePatterns PS00195 Glutaredoxin active site. 6 21 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 Pfam PF00462 Glutaredoxin 4 63 5.6E-23 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 Gene3D G3DSA:3.40.30.10 1 80 1.6E-30 T 11-10-2018 AM1083 eb0978c3603b27441afd7cf7c2e4ff36 80 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 79 3.6E-32 T 11-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 AM499 236e3ed6d9560660557176746216563a 220 Gene3D G3DSA:3.40.50.150 3 220 4.5E-55 T 11-10-2018 AM499 236e3ed6d9560660557176746216563a 220 SUPERFAMILY SSF53335 41 218 1.99E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM499 236e3ed6d9560660557176746216563a 220 Pfam PF01596 O-methyltransferase 36 218 1.1E-34 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 202 1.1E-34 T 11-10-2018 IPR003111 Lon, substrate-binding domain AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 680 699 1.0E-52 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 602 618 1.0E-52 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 733 751 1.0E-52 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 710 729 1.0E-52 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 361 380 1.0E-52 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Gene3D G3DSA:3.40.50.300 319 495 3.1E-62 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 SUPERFAMILY SSF52540 313 568 1.58E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 357 493 8.7E-20 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 SUPERFAMILY SSF54211 602 775 9.1E-55 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 SMART SM00464 8 204 2.6E-52 T 11-10-2018 IPR003111 Lon, substrate-binding domain AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Gene3D G3DSA:3.30.230.10 592 779 8.2E-74 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 PIRSF PIRSF001174 1 781 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 683 691 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Gene3D G3DSA:1.10.8.60 496 591 5.1E-27 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Gene3D G3DSA:2.30.130.40 1 118 5.4E-30 T 11-10-2018 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Hamap MF_01973 Lon protease [lon]. 9 779 64.29 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 577 779 5.0E-88 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 SUPERFAMILY SSF88697 8 202 1.57E-40 T 11-10-2018 IPR015947 PUA-like superfamily AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 SMART SM00382 353 497 1.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 TIGRFAM TIGR00763 lon: endopeptidase La 10 777 4.3E-273 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AM311 0ec3ba34c03b9de5b97f36dd05dfd8d0 808 Gene3D G3DSA:1.20.58.1480 123 247 1.9E-31 T 11-10-2018 AM899 ec712a59b3d950932167e058796af4f4 179 SUPERFAMILY SSF55282 9 178 8.95E-67 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM899 ec712a59b3d950932167e058796af4f4 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.6E-38 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM899 ec712a59b3d950932167e058796af4f4 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 38.088 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM899 ec712a59b3d950932167e058796af4f4 179 PIRSF PIRSF002161 3 179 1.6E-57 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM899 ec712a59b3d950932167e058796af4f4 179 Gene3D G3DSA:3.30.1440.10 3 179 2.1E-68 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM899 ec712a59b3d950932167e058796af4f4 179 Pfam PF00281 Ribosomal protein L5 24 80 1.9E-21 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM868 632a363f9493f3c87aca5e2968329ed9 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 91 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AM868 632a363f9493f3c87aca5e2968329ed9 154 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 102 3.6E-23 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain AM868 632a363f9493f3c87aca5e2968329ed9 154 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 148 39.128 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 AM868 632a363f9493f3c87aca5e2968329ed9 154 SUPERFAMILY SSF53927 8 147 1.2E-41 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 AM868 632a363f9493f3c87aca5e2968329ed9 154 Gene3D G3DSA:3.40.140.10 2 154 1.4E-45 T 11-10-2018 AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 SUPERFAMILY SSF52540 202 461 4.7E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 Gene3D G3DSA:3.40.50.300 236 457 1.5E-72 T 11-10-2018 AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 SMART SM00487 280 468 2.1E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 SUPERFAMILY SSF50249 41 199 3.6E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 Gene3D G3DSA:2.40.50.140 67 167 3.8E-8 T 11-10-2018 AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 SMART SM00490 517 596 9.2E-18 T 11-10-2018 IPR001650 Helicase, C-terminal AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 Pfam PF00270 DEAD/DEAH box helicase 285 446 7.0E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 SUPERFAMILY SSF52540 401 607 6.93E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 Gene3D G3DSA:3.40.50.300 466 636 5.1E-45 T 11-10-2018 AM1336 aedbad769406b1b7f902657b3a2b5a3e 699 Pfam PF00271 Helicase conserved C-terminal domain 486 595 3.9E-16 T 11-10-2018 IPR001650 Helicase, C-terminal AM916 8f5e42e4fb5671f481fd913844cc1808 225 Hamap MF_00238 Cytidylate kinase [cmk]. 15 225 24.329 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM916 8f5e42e4fb5671f481fd913844cc1808 225 SUPERFAMILY SSF52540 14 224 1.28E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM916 8f5e42e4fb5671f481fd913844cc1808 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 14 220 1.3E-44 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM916 8f5e42e4fb5671f481fd913844cc1808 225 Gene3D G3DSA:3.40.50.300 3 223 1.5E-50 T 11-10-2018 AM916 8f5e42e4fb5671f481fd913844cc1808 225 Pfam PF02224 Cytidylate kinase 17 222 2.4E-43 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 AM142 5523cac2003bff11d65002a37f5ca01d 277 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 255 5.3E-100 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM142 5523cac2003bff11d65002a37f5ca01d 277 PIRSF PIRSF000388 3 262 2.7E-100 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM142 5523cac2003bff11d65002a37f5ca01d 277 Gene3D G3DSA:3.20.20.60 3 266 1.6E-97 T 11-10-2018 AM142 5523cac2003bff11d65002a37f5ca01d 277 SUPERFAMILY SSF51621 5 260 4.33E-96 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 AM142 5523cac2003bff11d65002a37f5ca01d 277 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 8 260 1.9E-90 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM142 5523cac2003bff11d65002a37f5ca01d 277 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 3 260 39.156 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 AM664 907cb693df4003ba96657b6cae5400ba 219 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM664 907cb693df4003ba96657b6cae5400ba 219 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 2 211 2.7E-76 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AM664 907cb693df4003ba96657b6cae5400ba 219 SUPERFAMILY SSF51569 2 212 6.91E-69 T 11-10-2018 AM664 907cb693df4003ba96657b6cae5400ba 219 Gene3D G3DSA:3.20.20.70 1 217 1.8E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM664 907cb693df4003ba96657b6cae5400ba 219 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 201 1.9E-51 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 AM197 ec2e81eb8cd8fd5504168edd7f9b0bc4 169 Pfam PF06271 RDD family 7 152 1.2E-8 T 11-10-2018 IPR010432 RDD AM193 fa4307c3e29991e0a69c3d942b78b6fe 506 Pfam PF00361 Proton-conducting membrane transporter 140 439 5.8E-49 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM193 fa4307c3e29991e0a69c3d942b78b6fe 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 249 275 4.8E-16 T 11-10-2018 AM193 fa4307c3e29991e0a69c3d942b78b6fe 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 227 248 4.8E-16 T 11-10-2018 AM193 fa4307c3e29991e0a69c3d942b78b6fe 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 4.8E-16 T 11-10-2018 AM193 fa4307c3e29991e0a69c3d942b78b6fe 506 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 4.8E-16 T 11-10-2018 AM1220 295bafc2b90c19c9e1ba6e4e6faa27f1 396 Pfam PF01617 Surface antigen 31 394 2.5E-29 T 11-10-2018 IPR002566 Surface antigen msp4 AM1220 295bafc2b90c19c9e1ba6e4e6faa27f1 396 Gene3D G3DSA:2.40.160.20 234 368 9.0E-10 T 11-10-2018 AM1220 295bafc2b90c19c9e1ba6e4e6faa27f1 396 SUPERFAMILY SSF56925 30 384 1.75E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM625 cdc915217432e8878cecb5c2d8ed1ddc 232 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 197 3.1E-48 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM625 cdc915217432e8878cecb5c2d8ed1ddc 232 Pfam PF00929 Exonuclease 6 164 5.0E-41 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM625 cdc915217432e8878cecb5c2d8ed1ddc 232 SMART SM00479 4 173 1.5E-53 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III AM625 cdc915217432e8878cecb5c2d8ed1ddc 232 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 224 1.0E-80 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AM625 cdc915217432e8878cecb5c2d8ed1ddc 232 Gene3D G3DSA:3.30.420.10 2 172 1.2E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM625 cdc915217432e8878cecb5c2d8ed1ddc 232 SUPERFAMILY SSF53098 4 172 2.94E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM527 a2aaadc43cbc6abd08afcffe0dfdae52 258 Gene3D G3DSA:3.40.50.150 11 239 6.4E-21 T 11-10-2018 AM527 a2aaadc43cbc6abd08afcffe0dfdae52 258 Pfam PF08241 Methyltransferase domain 48 135 1.8E-14 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 AM527 a2aaadc43cbc6abd08afcffe0dfdae52 258 SUPERFAMILY SSF53335 39 211 1.59E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM898 c3d47ed9a6455d88045e63c1591b7239 82 ProSitePatterns PS00527 Ribosomal protein S14 signature. 44 66 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM898 c3d47ed9a6455d88045e63c1591b7239 82 Pfam PF00253 Ribosomal protein S14p/S29e 28 81 1.5E-23 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM898 c3d47ed9a6455d88045e63c1591b7239 82 SUPERFAMILY SSF57716 3 82 5.63E-30 T 11-10-2018 AM898 c3d47ed9a6455d88045e63c1591b7239 82 Gene3D G3DSA:4.10.830.10 21 82 1.5E-21 T 11-10-2018 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 SUPERFAMILY SSF54506 154 270 9.42E-38 T 11-10-2018 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 13 277 26.555 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 Pfam PF01678 Diaminopimelate epimerase 15 129 2.1E-14 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 Pfam PF01678 Diaminopimelate epimerase 159 264 4.2E-23 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 Gene3D G3DSA:3.10.310.10 126 272 2.8E-72 T 11-10-2018 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 SUPERFAMILY SSF54506 13 137 4.04E-29 T 11-10-2018 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 14 271 5.5E-65 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 AM1323 e4ee986569e45a9f0d69e20f8ad0c2f3 277 Gene3D G3DSA:3.10.310.10 15 273 2.8E-72 T 11-10-2018 AM490 077bc3597849c2a92789fadecd3b854d 632 PRINTS PR00046 Major sigma-70 factor signature 608 619 3.2E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 PRINTS PR00046 Major sigma-70 factor signature 447 455 3.2E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 PRINTS PR00046 Major sigma-70 factor signature 423 436 3.2E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 PRINTS PR00046 Major sigma-70 factor signature 571 583 3.2E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 PRINTS PR00046 Major sigma-70 factor signature 593 608 3.2E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 Pfam PF04546 Sigma-70, non-essential region 151 367 9.9E-28 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM490 077bc3597849c2a92789fadecd3b854d 632 Pfam PF04545 Sigma-70, region 4 567 621 6.9E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 Pfam PF04542 Sigma-70 region 2 399 468 7.7E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 423 436 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 Gene3D G3DSA:1.10.10.10 472 547 1.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM490 077bc3597849c2a92789fadecd3b854d 632 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 18 630 36.356 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AM490 077bc3597849c2a92789fadecd3b854d 632 SUPERFAMILY SSF88659 530 629 1.87E-24 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM490 077bc3597849c2a92789fadecd3b854d 632 SUPERFAMILY SSF88946 126 466 1.52E-80 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 SUPERFAMILY SSF88659 472 545 4.27E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like AM490 077bc3597849c2a92789fadecd3b854d 632 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 593 619 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 Gene3D G3DSA:1.10.10.10 549 632 1.7E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily AM490 077bc3597849c2a92789fadecd3b854d 632 Gene3D G3DSA:1.10.601.10 124 468 2.5E-94 T 11-10-2018 AM490 077bc3597849c2a92789fadecd3b854d 632 Gene3D G3DSA:1.10.220.120 18 80 3.4E-12 T 11-10-2018 AM490 077bc3597849c2a92789fadecd3b854d 632 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 395 621 1.9E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 Pfam PF03979 Sigma-70 factor, region 1.1 20 96 1.4E-15 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 395 631 1.2E-114 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AM490 077bc3597849c2a92789fadecd3b854d 632 Pfam PF04539 Sigma-70 region 3 478 554 1.9E-23 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 AM490 077bc3597849c2a92789fadecd3b854d 632 Pfam PF00140 Sigma-70 factor, region 1.2 109 137 4.5E-9 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AM814 a6f473e6dd48b61335ff07f8815ec621 802 Gene3D G3DSA:3.40.50.300 576 765 7.2E-22 T 11-10-2018 AM814 a6f473e6dd48b61335ff07f8815ec621 802 Gene3D G3DSA:3.40.50.300 424 549 4.2E-8 T 11-10-2018 AM814 a6f473e6dd48b61335ff07f8815ec621 802 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 22 798 2.0E-250 T 11-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 AM814 a6f473e6dd48b61335ff07f8815ec621 802 SMART SM00382 447 705 2.9E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AM814 a6f473e6dd48b61335ff07f8815ec621 802 SUPERFAMILY SSF52540 425 748 2.11E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM814 a6f473e6dd48b61335ff07f8815ec621 802 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 194 396 1.5E-54 T 11-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AM1109 a05a5c3afdabae639ef94993879a74cb 450 Pfam PF13685 Iron-containing alcohol dehydrogenase 65 315 1.4E-49 T 11-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 AM1109 a05a5c3afdabae639ef94993879a74cb 450 SUPERFAMILY SSF56796 59 344 9.16E-53 T 11-10-2018 AM1109 a05a5c3afdabae639ef94993879a74cb 450 Gene3D G3DSA:3.40.50.1970 55 201 6.9E-29 T 11-10-2018 AM1326 612b0c62b4a075f457b7357328f53014 385 SUPERFAMILY SSF53748 9 383 3.65E-119 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 371 385 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 310 335 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 1.2E-61 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 Pfam PF00162 Phosphoglycerate kinase 11 383 4.3E-126 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 PIRSF PIRSF000724 2 385 4.6E-131 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 Gene3D G3DSA:3.40.50.1260 172 383 3.2E-125 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 19 29 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 385 30.631 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM1326 612b0c62b4a075f457b7357328f53014 385 Gene3D G3DSA:3.40.50.1260 14 171 3.2E-125 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 AM876 1dd353327c2b8bc33d399e23495bd565 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 73 95 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site AM876 1dd353327c2b8bc33d399e23495bd565 299 Pfam PF01040 UbiA prenyltransferase family 34 275 1.7E-49 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 AM876 1dd353327c2b8bc33d399e23495bd565 299 Gene3D G3DSA:1.20.120.1780 179 298 4.3E-19 T 11-10-2018 AM876 1dd353327c2b8bc33d399e23495bd565 299 Gene3D G3DSA:1.10.357.140 24 178 1.3E-36 T 11-10-2018 AM593 887894a8b3794435e31d012c568e6c91 39 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM593 887894a8b3794435e31d012c568e6c91 39 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 6 38 1.1E-8 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM593 887894a8b3794435e31d012c568e6c91 39 Pfam PF00444 Ribosomal protein L36 3 38 1.2E-15 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM593 887894a8b3794435e31d012c568e6c91 39 SUPERFAMILY SSF57840 2 38 4.32E-13 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM593 887894a8b3794435e31d012c568e6c91 39 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 14.957 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM593 887894a8b3794435e31d012c568e6c91 39 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 13 38 0.01 T 11-10-2018 AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 PIRSF PIRSF000094 13 271 1.3E-108 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 SUPERFAMILY SSF51735 17 266 5.46E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 Gene3D G3DSA:3.40.50.720 12 282 1.7E-59 T 11-10-2018 AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 263 3.4E-86 T 11-10-2018 AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 1.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 189 1.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 208 1.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM428 eee87218fb8bb8fc8cfc63efb28575c9 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 1.3E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM210 5bbeeb0abda764fdcadcefd316d0384b 129 Pfam PF04956 TrbC/VIRB2 family 8 100 2.2E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM1221 f345355590ae9b31b959d37337912bbf 399 Pfam PF01617 Surface antigen 31 397 1.2E-31 T 11-10-2018 IPR002566 Surface antigen msp4 AM1221 f345355590ae9b31b959d37337912bbf 399 Gene3D G3DSA:2.40.160.20 191 387 1.8E-7 T 11-10-2018 AM1221 f345355590ae9b31b959d37337912bbf 399 SUPERFAMILY SSF56925 281 355 2.88E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM462 d0906801f2b9fe1c4131c4a524e11ec6 280 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 85 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM462 d0906801f2b9fe1c4131c4a524e11ec6 280 Pfam PF01066 CDP-alcohol phosphatidyltransferase 22 85 2.2E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AM462 d0906801f2b9fe1c4131c4a524e11ec6 280 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 27 198 6.6E-34 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 AM462 d0906801f2b9fe1c4131c4a524e11ec6 280 Gene3D G3DSA:1.20.120.1760 13 167 3.3E-15 T 11-10-2018 AM462 d0906801f2b9fe1c4131c4a524e11ec6 280 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 211 247 1.2E-8 T 11-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal AM271 5f5573928953c642a9d89ca661c48a7f 257 Pfam PF03309 Type III pantothenate kinase 3 208 1.2E-50 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM271 5f5573928953c642a9d89ca661c48a7f 257 SUPERFAMILY SSF53067 127 253 1.06E-26 T 11-10-2018 AM271 5f5573928953c642a9d89ca661c48a7f 257 Gene3D G3DSA:3.30.420.40 1 89 2.7E-22 T 11-10-2018 AM271 5f5573928953c642a9d89ca661c48a7f 257 SUPERFAMILY SSF53067 1 124 3.1E-23 T 11-10-2018 AM271 5f5573928953c642a9d89ca661c48a7f 257 Gene3D G3DSA:3.30.420.40 93 257 8.6E-34 T 11-10-2018 AM271 5f5573928953c642a9d89ca661c48a7f 257 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 250 4.5E-48 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM271 5f5573928953c642a9d89ca661c48a7f 257 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 256 27.619 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 AM1331 e8f264246e39e0abc5e75127a7b578e5 290 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 149 183 3.0E-6 T 11-10-2018 IPR001451 Hexapeptide repeat AM1331 e8f264246e39e0abc5e75127a7b578e5 290 Gene3D G3DSA:2.160.10.10 104 273 3.7E-51 T 11-10-2018 AM1331 e8f264246e39e0abc5e75127a7b578e5 290 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 192 226 4.1E-11 T 11-10-2018 IPR001451 Hexapeptide repeat AM1331 e8f264246e39e0abc5e75127a7b578e5 290 SUPERFAMILY SSF51161 38 271 1.52E-61 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AM1331 e8f264246e39e0abc5e75127a7b578e5 290 Gene3D G3DSA:1.10.166.10 20 84 9.9E-11 T 11-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 AM1331 e8f264246e39e0abc5e75127a7b578e5 290 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 36 82 8.0E-11 T 11-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 Gene3D G3DSA:1.25.40.10 77 173 1.6E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 Gene3D G3DSA:3.40.50.150 174 363 4.5E-23 T 11-10-2018 AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 SUPERFAMILY SSF53335 184 372 1.53E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 Pfam PF13649 Methyltransferase domain 230 327 2.5E-14 T 11-10-2018 AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 SUPERFAMILY SSF48452 95 172 1.83E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 SMART SM00028 129 162 2.0E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM1319 0a30b7f0acdb532dca9a08ed3cc77ed5 413 Pfam PF13181 Tetratricopeptide repeat 130 162 7.0E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 Pfam PF08264 Anticodon-binding domain of tRNA 737 876 1.6E-21 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 Gene3D G3DSA:3.90.740.10 201 419 6.2E-225 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 659 4.2E-187 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 SUPERFAMILY SSF50677 204 415 2.93E-45 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 Gene3D G3DSA:3.40.50.620 17 654 6.2E-225 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 5 1086 13.654 T 11-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 588 597 2.7E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 43 54 2.7E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 413 428 2.7E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 233 256 2.7E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 548 561 2.7E-29 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 SUPERFAMILY SSF52374 9 660 1.04E-129 T 11-10-2018 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 SUPERFAMILY SSF47323 685 939 7.48E-45 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 Gene3D G3DSA:1.10.730.10 673 869 6.1E-39 T 11-10-2018 AM684 cb558348f05f2fa34fd55874e2ee2c18 1101 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 10 881 5.9E-255 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 AM1123 afd5392ccd49b61c6006a95b2d82b924 317 SUPERFAMILY SSF161111 32 228 5.62E-50 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM1123 afd5392ccd49b61c6006a95b2d82b924 317 Gene3D G3DSA:1.20.1510.10 32 227 6.7E-39 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily AM1123 afd5392ccd49b61c6006a95b2d82b924 317 Pfam PF01545 Cation efflux family 38 227 3.3E-42 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM1123 afd5392ccd49b61c6006a95b2d82b924 317 SUPERFAMILY SSF160240 231 310 1.96E-10 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 AM1123 afd5392ccd49b61c6006a95b2d82b924 317 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 33 309 5.2E-81 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AM335 996376b50d82f7514d7cb18418f212e2 387 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 30 378 3.5E-103 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AM335 996376b50d82f7514d7cb18418f212e2 387 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 29 379 38.163 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AM335 996376b50d82f7514d7cb18418f212e2 387 Gene3D G3DSA:2.40.30.10 300 383 1.1E-13 T 11-10-2018 AM335 996376b50d82f7514d7cb18418f212e2 387 Gene3D G3DSA:3.40.50.620 22 235 1.8E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM335 996376b50d82f7514d7cb18418f212e2 387 SUPERFAMILY SSF52402 29 270 1.7E-50 T 11-10-2018 AM335 996376b50d82f7514d7cb18418f212e2 387 Gene3D G3DSA:2.30.30.280 241 299 3.1E-17 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 AM335 996376b50d82f7514d7cb18418f212e2 387 Pfam PF03054 tRNA methyl transferase 30 378 7.5E-114 T 11-10-2018 AM1233 54e520d54991be7f8e93ad212b0f65f5 106 TIGRFAM TIGR00029 S20: ribosomal protein bS20 11 96 8.7E-17 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM1233 54e520d54991be7f8e93ad212b0f65f5 106 Gene3D G3DSA:1.20.58.110 11 97 1.2E-21 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM1233 54e520d54991be7f8e93ad212b0f65f5 106 Pfam PF01649 Ribosomal protein S20 12 95 2.0E-22 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM1233 54e520d54991be7f8e93ad212b0f65f5 106 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 11 96 14.711 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM1233 54e520d54991be7f8e93ad212b0f65f5 106 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 45 103 3.0E-12 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM1233 54e520d54991be7f8e93ad212b0f65f5 106 SUPERFAMILY SSF46992 13 97 4.19E-23 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM990 c15887d073248e2765db2d5d6407485e 103 Pfam PF04956 TrbC/VIRB2 family 2 78 6.8E-11 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM939 56c4cc26601867581a478e1e24768a0c 454 ProSitePatterns PS00483 Dihydroorotase signature 2. 333 344 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM939 56c4cc26601867581a478e1e24768a0c 454 Gene3D G3DSA:2.30.40.10 34 450 5.0E-130 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM939 56c4cc26601867581a478e1e24768a0c 454 ProSitePatterns PS00482 Dihydroorotase signature 1. 89 97 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM939 56c4cc26601867581a478e1e24768a0c 454 Hamap MF_00220_B Dihydroorotase [pyrC]. 28 453 41.052 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM939 56c4cc26601867581a478e1e24768a0c 454 SUPERFAMILY SSF51338 31 452 2.59E-22 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 AM939 56c4cc26601867581a478e1e24768a0c 454 Gene3D G3DSA:3.20.20.140 87 397 5.0E-130 T 11-10-2018 AM939 56c4cc26601867581a478e1e24768a0c 454 Pfam PF01979 Amidohydrolase family 82 450 2.7E-25 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 AM939 56c4cc26601867581a478e1e24768a0c 454 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 72 451 3.2E-123 T 11-10-2018 AM939 56c4cc26601867581a478e1e24768a0c 454 SUPERFAMILY SSF51556 86 396 4.33E-99 T 11-10-2018 IPR032466 Metal-dependent hydrolase AM1186 8cf330a941696e2370f6362fc3056ae9 409 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 14 396 1.9E-113 T 11-10-2018 IPR011718 Glutamate--cysteine ligase GshA AM1186 8cf330a941696e2370f6362fc3056ae9 409 Gene3D G3DSA:3.40.50.11280 56 191 2.3E-32 T 11-10-2018 AM1186 8cf330a941696e2370f6362fc3056ae9 409 Pfam PF08886 Glutamate-cysteine ligase 9 393 2.9E-140 T 11-10-2018 IPR011718 Glutamate--cysteine ligase GshA AM315 e9e9bb7cc4a650fe5fdeccc9d8bc4910 277 Gene3D G3DSA:3.40.250.10 109 252 2.6E-44 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AM315 e9e9bb7cc4a650fe5fdeccc9d8bc4910 277 Hamap MF_00469 UPF0176 protein YceA [yceA]. 6 258 40.026 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 AM315 e9e9bb7cc4a650fe5fdeccc9d8bc4910 277 SUPERFAMILY SSF52821 113 229 8.09E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily AM315 e9e9bb7cc4a650fe5fdeccc9d8bc4910 277 Pfam PF00581 Rhodanese-like domain 125 213 2.6E-8 T 11-10-2018 IPR001763 Rhodanese-like domain AM315 e9e9bb7cc4a650fe5fdeccc9d8bc4910 277 SMART SM00450 116 218 6.6E-15 T 11-10-2018 IPR001763 Rhodanese-like domain AM315 e9e9bb7cc4a650fe5fdeccc9d8bc4910 277 Gene3D G3DSA:3.30.70.100 3 100 1.0E-30 T 11-10-2018 AM336 8a015fc590485b10b73b8cd6322df4be 340 Gene3D G3DSA:3.30.450.90 2 93 1.6E-8 T 11-10-2018 AM336 8a015fc590485b10b73b8cd6322df4be 340 SUPERFAMILY SSF52540 3 307 3.45E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM336 8a015fc590485b10b73b8cd6322df4be 340 Gene3D G3DSA:3.40.50.300 107 324 9.0E-16 T 11-10-2018 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 356 37.221 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 Gene3D G3DSA:3.30.1490.20 122 185 5.8E-87 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 SUPERFAMILY SSF51246 309 354 1.02E-10 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 12 355 6.4E-107 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 Pfam PF02222 ATP-grasp domain 117 285 3.3E-53 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type AM1036 f79cf7c93ece2006b47c9366768da3b7 356 Gene3D G3DSA:3.30.470.20 111 354 5.8E-87 T 11-10-2018 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 SUPERFAMILY SSF56059 107 305 1.94E-62 T 11-10-2018 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 Gene3D G3DSA:3.40.50.20 4 110 7.8E-31 T 11-10-2018 AM1036 f79cf7c93ece2006b47c9366768da3b7 356 SUPERFAMILY SSF52440 8 104 2.88E-19 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 28 436 1.8E-144 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 Pfam PF00364 Biotin-requiring enzyme 37 101 1.2E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 Gene3D G3DSA:2.40.50.100 27 105 2.7E-17 T 11-10-2018 AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 207 434 6.5E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 52 81 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 SUPERFAMILY SSF52777 207 436 3.47E-87 T 11-10-2018 AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 Gene3D G3DSA:3.30.559.10 207 437 4.4E-94 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 AM1087 4bc2ed12a6b2e4a0fd26d36e61741598 437 SUPERFAMILY SSF51230 29 118 4.45E-17 T 11-10-2018 IPR011053 Single hybrid motif AM579 e03c5cc3a69e0c50c0df7de1e3721247 135 Pfam PF06199 Phage tail tube protein 3 126 1.1E-9 T 11-10-2018 IPR011855 Phage major tail protein TP901-1 AM571 3784ca1443d53109ad75cc0519c14828 234 Pfam PF13489 Methyltransferase domain 47 198 5.0E-24 T 11-10-2018 AM571 3784ca1443d53109ad75cc0519c14828 234 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 9 228 3.8E-78 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM571 3784ca1443d53109ad75cc0519c14828 234 SUPERFAMILY SSF53335 12 233 3.35E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM571 3784ca1443d53109ad75cc0519c14828 234 Gene3D G3DSA:3.40.50.150 9 234 1.2E-67 T 11-10-2018 AM571 3784ca1443d53109ad75cc0519c14828 234 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 234 35.707 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM1081 60fcf80259585fcdc44f97312226393c 170 Pfam PF01252 Signal peptidase (SPase) II 11 145 3.0E-31 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM1081 60fcf80259585fcdc44f97312226393c 170 TIGRFAM TIGR00077 lspA: signal peptidase II 8 153 3.8E-27 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM1081 60fcf80259585fcdc44f97312226393c 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 4.7E-13 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM1081 60fcf80259585fcdc44f97312226393c 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 4.7E-13 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM1081 60fcf80259585fcdc44f97312226393c 170 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 4.7E-13 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM1081 60fcf80259585fcdc44f97312226393c 170 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 154 13.719 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 AM305 16ab934049400feb55c847d5c290e4c8 174 SUPERFAMILY SSF101307 7 167 1.57E-29 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 AM305 16ab934049400feb55c847d5c290e4c8 174 Pfam PF04608 Phosphatidylglycerophosphatase A 12 167 8.2E-38 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 AM305 16ab934049400feb55c847d5c290e4c8 174 PIRSF PIRSF006162 2 174 5.4E-50 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 AM1093 f1c9cea461b1137be0a71a42cd231ed8 110 Gene3D G3DSA:1.10.150.250 27 110 4.0E-22 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AM1093 f1c9cea461b1137be0a71a42cd231ed8 110 Pfam PF03937 Flavinator of succinate dehydrogenase 32 103 1.8E-21 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase AM1093 f1c9cea461b1137be0a71a42cd231ed8 110 SUPERFAMILY SSF109910 28 104 1.57E-20 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily AM451 21d320768cdd3b1dc7d8f20864a49cad 261 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 261 24.679 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM451 21d320768cdd3b1dc7d8f20864a49cad 261 SUPERFAMILY SSF64167 1 259 8.5E-61 T 11-10-2018 AM451 21d320768cdd3b1dc7d8f20864a49cad 261 Pfam PF01975 Survival protein SurE 3 183 6.3E-45 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM451 21d320768cdd3b1dc7d8f20864a49cad 261 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 245 7.8E-46 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM451 21d320768cdd3b1dc7d8f20864a49cad 261 Gene3D G3DSA:3.40.1210.10 1 259 5.6E-63 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 AM1056 9f047aef4c58d1c52d72edf52ed1c858 196 Pfam PF04956 TrbC/VIRB2 family 116 183 2.0E-12 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM507 aa70afcce8c00432240061f24f0de27c 425 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 246 6.0E-97 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM507 aa70afcce8c00432240061f24f0de27c 425 Gene3D G3DSA:3.30.930.10 1 322 3.8E-106 T 11-10-2018 AM507 aa70afcce8c00432240061f24f0de27c 425 SUPERFAMILY SSF52954 324 424 3.11E-23 T 11-10-2018 AM507 aa70afcce8c00432240061f24f0de27c 425 SUPERFAMILY SSF55681 16 339 1.9E-90 T 11-10-2018 AM507 aa70afcce8c00432240061f24f0de27c 425 Pfam PF03129 Anticodon binding domain 336 424 1.1E-12 T 11-10-2018 IPR004154 Anticodon-binding AM507 aa70afcce8c00432240061f24f0de27c 425 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 425 59.945 T 11-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AM507 aa70afcce8c00432240061f24f0de27c 425 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.7E-14 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM507 aa70afcce8c00432240061f24f0de27c 425 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.7E-14 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM507 aa70afcce8c00432240061f24f0de27c 425 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.7E-14 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM507 aa70afcce8c00432240061f24f0de27c 425 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.7E-14 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 AM507 aa70afcce8c00432240061f24f0de27c 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 319 4.6E-40 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM507 aa70afcce8c00432240061f24f0de27c 425 Gene3D G3DSA:3.40.50.800 323 425 2.8E-22 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily AM141 b37ffa99f5f3e8065d1304c898202f52 341 Hamap MF_01665 Heme A synthase [ctaA]. 4 329 23.227 T 11-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AM141 b37ffa99f5f3e8065d1304c898202f52 341 Pfam PF02628 Cytochrome oxidase assembly protein 9 318 1.5E-98 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 AM180 16c1eaf225bb7a91585367df2c63539a 739 Pfam PF03429 Major surface protein 1B 1 739 0.0 T 11-10-2018 IPR005091 Major surface protein 1B AM1067 576089a2eb20014bebd06df9046f71fc 204 Gene3D G3DSA:2.50.20.10 36 199 1.0E-10 T 11-10-2018 AM1067 576089a2eb20014bebd06df9046f71fc 204 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 48 197 2.2E-10 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like AM1067 576089a2eb20014bebd06df9046f71fc 204 SUPERFAMILY SSF89392 37 197 4.32E-23 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX AM1255 57a6a8dacd8249f50a4ff8fac580fdd5 329 Pfam PF01617 Surface antigen 93 327 1.5E-19 T 11-10-2018 IPR002566 Surface antigen msp4 AM1255 57a6a8dacd8249f50a4ff8fac580fdd5 329 SUPERFAMILY SSF56925 85 278 2.09E-12 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM897 714f79e97438e9bca4071071808e6424 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM897 714f79e97438e9bca4071071808e6424 132 SUPERFAMILY SSF56047 3 132 4.19E-41 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM897 714f79e97438e9bca4071071808e6424 132 Gene3D G3DSA:3.30.1370.30 4 78 6.8E-21 T 11-10-2018 AM897 714f79e97438e9bca4071071808e6424 132 Pfam PF00410 Ribosomal protein S8 5 132 2.5E-42 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM897 714f79e97438e9bca4071071808e6424 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 29.338 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 AM897 714f79e97438e9bca4071071808e6424 132 Gene3D G3DSA:3.30.1490.10 79 132 8.6E-22 T 11-10-2018 AM321 73d8763202340e458341c6889d8cf621 92 Pfam PF02325 YGGT family 10 85 7.2E-14 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 AM396 ff2366f6ba9d56abc8442bab1394b355 294 SUPERFAMILY SSF53807 27 290 2.21E-56 T 11-10-2018 AM396 ff2366f6ba9d56abc8442bab1394b355 294 Gene3D G3DSA:3.40.50.1980 181 292 2.1E-24 T 11-10-2018 AM396 ff2366f6ba9d56abc8442bab1394b355 294 Gene3D G3DSA:3.40.50.1980 24 180 6.3E-32 T 11-10-2018 AM396 ff2366f6ba9d56abc8442bab1394b355 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 288 1.7E-46 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AM560 cebba9529c7e457d31b2ca658c546580 339 SUPERFAMILY SSF53850 39 338 1.52E-69 T 11-10-2018 AM560 cebba9529c7e457d31b2ca658c546580 339 Pfam PF16868 NMT1-like family 43 336 1.4E-82 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM560 cebba9529c7e457d31b2ca658c546580 339 Gene3D G3DSA:3.40.190.10 43 336 8.1E-93 T 11-10-2018 AM560 cebba9529c7e457d31b2ca658c546580 339 Gene3D G3DSA:3.40.190.10 134 272 8.1E-93 T 11-10-2018 AM560 cebba9529c7e457d31b2ca658c546580 339 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 12 336 5.6E-78 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family AM518 dadde456f9c8a9e03d068ebf688f06c4 436 SUPERFAMILY SSF118215 79 427 1.7E-44 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM518 dadde456f9c8a9e03d068ebf688f06c4 436 Gene3D G3DSA:1.10.3860.10 55 434 4.7E-24 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 AM518 dadde456f9c8a9e03d068ebf688f06c4 436 Pfam PF00375 Sodium:dicarboxylate symporter family 62 427 1.4E-31 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 AM859 1d490d1dba7259552ef133a001ed6ee0 164 SUPERFAMILY SSF53098 24 157 1.97E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM859 1d490d1dba7259552ef133a001ed6ee0 164 Gene3D G3DSA:3.30.420.140 22 162 6.4E-39 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 AM859 1d490d1dba7259552ef133a001ed6ee0 164 Pfam PF03652 Holliday junction resolvase 25 156 3.4E-37 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM859 1d490d1dba7259552ef133a001ed6ee0 164 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 27 156 2.5E-24 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM859 1d490d1dba7259552ef133a001ed6ee0 164 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 24 159 20.605 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AM859 1d490d1dba7259552ef133a001ed6ee0 164 SMART SM00732 24 124 3.9E-25 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 SUPERFAMILY SSF55653 57 147 6.54E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 Gene3D G3DSA:3.10.430.100 64 147 7.2E-19 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 145 5.1E-18 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 SUPERFAMILY SSF55658 3 56 1.74E-11 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 Pfam PF01281 Ribosomal protein L9, N-terminal domain 4 45 2.4E-14 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 TIGRFAM TIGR00158 L9: ribosomal protein bL9 3 146 2.3E-31 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 Gene3D G3DSA:3.40.5.10 2 63 2.0E-13 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM162 31dfecf7b27cd59d73109ba15bd3be0c 220 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 2 147 21.092 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 SUPERFAMILY SSF52374 2 291 1.29E-73 T 11-10-2018 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 SUPERFAMILY SSF47323 294 448 5.79E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 Pfam PF09334 tRNA synthetases class I (M) 89 305 4.7E-61 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 Pfam PF09334 tRNA synthetases class I (M) 2 88 8.0E-12 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 PRINTS PR01041 Methionyl-tRNA synthetase signature 29 40 7.7E-16 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 PRINTS PR01041 Methionyl-tRNA synthetase signature 165 176 7.7E-16 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 304 7.7E-16 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 PRINTS PR01041 Methionyl-tRNA synthetase signature 201 216 7.7E-16 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 Gene3D G3DSA:3.40.50.620 2 278 1.9E-105 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 Gene3D G3DSA:2.170.220.10 58 168 1.9E-105 T 11-10-2018 AM1001 1fcdb94b0c1ba8c1e1a8fc24ff78fa20 455 Gene3D G3DSA:1.10.730.10 284 449 1.2E-42 T 11-10-2018 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 2.7E-122 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.014 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.3E-48 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.3E-48 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 1.3E-48 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.3E-48 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.3E-48 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.3E-48 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 SUPERFAMILY SSF55681 1 279 1.13E-111 T 11-10-2018 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 Gene3D G3DSA:3.30.930.10 1 205 2.1E-90 T 11-10-2018 AM1294 8c8bf1ce1d78096c0d220385d18c03a6 283 Gene3D G3DSA:1.20.58.180 206 282 1.7E-25 T 11-10-2018 AM1142 1d6fcd73fca441b17fe0b82b50049377 303 SUPERFAMILY SSF56925 126 292 9.68E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1142 1d6fcd73fca441b17fe0b82b50049377 303 Gene3D G3DSA:2.40.160.20 101 259 3.9E-7 T 11-10-2018 AM1142 1d6fcd73fca441b17fe0b82b50049377 303 Pfam PF01617 Surface antigen 44 301 7.0E-30 T 11-10-2018 IPR002566 Surface antigen msp4 AM566 0fff7064746d5df7654250b53ff4c454 225 SUPERFAMILY SSF53335 20 203 2.89E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AM566 0fff7064746d5df7654250b53ff4c454 225 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 34 214 7.3E-65 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 AM566 0fff7064746d5df7654250b53ff4c454 225 Pfam PF13489 Methyltransferase domain 33 184 5.2E-24 T 11-10-2018 AM566 0fff7064746d5df7654250b53ff4c454 225 Gene3D G3DSA:3.40.50.150 14 220 6.6E-58 T 11-10-2018 AM154 d3620f215c609f085b0f9d33302a5331 78 Gene3D G3DSA:3.30.300.90 4 73 4.1E-28 T 11-10-2018 AM154 d3620f215c609f085b0f9d33302a5331 78 Pfam PF01722 BolA-like protein 22 71 3.5E-13 T 11-10-2018 IPR002634 BolA protein AM154 d3620f215c609f085b0f9d33302a5331 78 SUPERFAMILY SSF82657 5 75 1.44E-20 T 11-10-2018 IPR036065 BolA-like superfamily AM154 d3620f215c609f085b0f9d33302a5331 78 PIRSF PIRSF003113 3 78 5.6E-19 T 11-10-2018 IPR002634 BolA protein AM863 2eac96ad4928976de54dab49d7953e47 329 Gene3D G3DSA:3.50.50.60 2 284 6.8E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily AM863 2eac96ad4928976de54dab49d7953e47 329 SUPERFAMILY SSF54373 162 251 1.57E-15 T 11-10-2018 AM863 2eac96ad4928976de54dab49d7953e47 329 SUPERFAMILY SSF51971 9 290 5.77E-10 T 11-10-2018 AM863 2eac96ad4928976de54dab49d7953e47 329 Gene3D G3DSA:3.30.9.10 41 252 6.8E-30 T 11-10-2018 AM863 2eac96ad4928976de54dab49d7953e47 329 Pfam PF01266 FAD dependent oxidoreductase 14 285 6.4E-22 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 AM910 1fe56345303cd65080e2703616cbd636 102 Gene3D G3DSA:3.30.70.330 8 100 2.8E-18 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily AM910 1fe56345303cd65080e2703616cbd636 102 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 100 14.749 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM910 1fe56345303cd65080e2703616cbd636 102 SUPERFAMILY SSF54189 7 97 1.4E-20 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM910 1fe56345303cd65080e2703616cbd636 102 Pfam PF00276 Ribosomal protein L23 12 96 2.0E-17 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 Gene3D G3DSA:3.10.20.70 4 106 3.0E-36 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 Gene3D G3DSA:3.30.590.10 107 456 3.6E-127 T 11-10-2018 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 SUPERFAMILY SSF54368 5 101 1.7E-32 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 SMART SM01230 104 378 5.8E-125 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 466 1.4E-176 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 SUPERFAMILY SSF55931 105 466 1.77E-119 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 Pfam PF00120 Glutamine synthetase, catalytic domain 105 465 2.7E-122 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM1206 8ae0e6b3edbe6558400c73a31e2e0e67 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 9.9E-29 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 AM630 e71a106ee436efbfb6a82c29734585eb 177 Gene3D G3DSA:2.60.40.1880 34 176 5.0E-6 T 11-10-2018 IPR038696 Invasion protein B superfamily AM303 b43c75e9d5725c4a01cc9f4b3ff3f830 257 Gene3D G3DSA:3.40.630.30 9 253 5.9E-11 T 11-10-2018 AM303 b43c75e9d5725c4a01cc9f4b3ff3f830 257 SUPERFAMILY SSF55729 157 251 4.63E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase AM303 b43c75e9d5725c4a01cc9f4b3ff3f830 257 Pfam PF00583 Acetyltransferase (GNAT) family 162 243 1.2E-7 T 11-10-2018 IPR000182 GNAT domain AM746 120ef61c04b40e2375dc57d992c4bc20 633 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 122 2.2E-22 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 324 336 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 425 444 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 83 108 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 255 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 256 282 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 111 131 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 158 179 6.9E-61 T 11-10-2018 AM746 120ef61c04b40e2375dc57d992c4bc20 633 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 12 625 3.6E-209 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM746 120ef61c04b40e2375dc57d992c4bc20 633 Pfam PF00361 Proton-conducting membrane transporter 134 428 3.5E-81 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM517 c4a08d0040cbd07a5b5e0c30aea33efd 197 Gene3D G3DSA:3.30.420.40 1 120 1.0E-21 T 11-10-2018 AM517 c4a08d0040cbd07a5b5e0c30aea33efd 197 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 140 9.7E-29 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 AM517 c4a08d0040cbd07a5b5e0c30aea33efd 197 Pfam PF00814 Glycoprotease family 33 102 1.3E-10 T 11-10-2018 IPR000905 Gcp-like domain AM517 c4a08d0040cbd07a5b5e0c30aea33efd 197 SUPERFAMILY SSF53067 3 104 3.72E-17 T 11-10-2018 AM1139 8fd05dcba3aa481620042298501f6d80 330 Pfam PF01617 Surface antigen 114 284 1.2E-26 T 11-10-2018 IPR002566 Surface antigen msp4 AM1139 8fd05dcba3aa481620042298501f6d80 330 SUPERFAMILY SSF56925 37 265 6.8E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM260 a667a60c31c96b63b825051cc00dda42 163 Pfam PF00466 Ribosomal protein L10 3 98 1.4E-15 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AM260 a667a60c31c96b63b825051cc00dda42 163 SUPERFAMILY SSF160369 3 161 8.11E-30 T 11-10-2018 AM260 a667a60c31c96b63b825051cc00dda42 163 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 142 0.002 T 11-10-2018 AM260 a667a60c31c96b63b825051cc00dda42 163 Gene3D G3DSA:3.30.70.1730 1 133 2.1E-23 T 11-10-2018 AM206 2bbee196ee672706821de319ba3e505f 257 Pfam PF08478 POTRA domain, FtsQ-type 65 133 1.7E-14 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type AM206 2bbee196ee672706821de319ba3e505f 257 Pfam PF03799 Cell division protein FtsQ 137 248 5.2E-12 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB AM222 aed98292c81f84ad2d782911873efe8c 275 Gene3D G3DSA:3.30.590.10 3 273 9.8E-50 T 11-10-2018 AM222 aed98292c81f84ad2d782911873efe8c 275 Pfam PF00120 Glutamine synthetase, catalytic domain 58 268 1.0E-39 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM222 aed98292c81f84ad2d782911873efe8c 275 SUPERFAMILY SSF55931 7 268 1.67E-56 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 AM222 aed98292c81f84ad2d782911873efe8c 275 SMART SM01230 1 229 3.6E-28 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AM018 a10bc14cadaf2f65d8232baa46d5af66 560 Hamap MF_01227 CTP synthase [pyrG]. 9 537 45.906 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM018 a10bc14cadaf2f65d8232baa46d5af66 560 SUPERFAMILY SSF52317 296 538 7.31E-72 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM018 a10bc14cadaf2f65d8232baa46d5af66 560 Pfam PF00117 Glutamine amidotransferase class-I 307 531 4.6E-50 T 11-10-2018 IPR017926 Glutamine amidotransferase AM018 a10bc14cadaf2f65d8232baa46d5af66 560 Pfam PF06418 CTP synthase N-terminus 10 271 1.3E-115 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM018 a10bc14cadaf2f65d8232baa46d5af66 560 TIGRFAM TIGR00337 PyrG: CTP synthase 9 531 2.3E-214 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 AM018 a10bc14cadaf2f65d8232baa46d5af66 560 Gene3D G3DSA:3.40.50.300 7 290 1.0E-120 T 11-10-2018 AM018 a10bc14cadaf2f65d8232baa46d5af66 560 SUPERFAMILY SSF52540 9 276 4.64E-114 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM018 a10bc14cadaf2f65d8232baa46d5af66 560 Gene3D G3DSA:3.40.50.880 291 549 6.7E-91 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM1254 bd2198a7f450d56387b6b04123abb4b7 494 SUPERFAMILY SSF143968 328 492 3.01E-62 T 11-10-2018 AM1254 bd2198a7f450d56387b6b04123abb4b7 494 Gene3D G3DSA:3.40.1670.10 342 459 3.3E-46 T 11-10-2018 AM1254 bd2198a7f450d56387b6b04123abb4b7 494 SUPERFAMILY SSF50475 4 327 9.81E-107 T 11-10-2018 AM1254 bd2198a7f450d56387b6b04123abb4b7 494 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 8 460 5.1E-141 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM1254 bd2198a7f450d56387b6b04123abb4b7 494 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 434 2.9E-152 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 AM1300 6aba674645604a20de741d229ceac323 272 Gene3D G3DSA:1.10.287.70 1 68 8.9E-20 T 11-10-2018 AM1300 6aba674645604a20de741d229ceac323 272 Gene3D G3DSA:1.20.120.80 71 271 8.4E-66 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1300 6aba674645604a20de741d229ceac323 272 SUPERFAMILY SSF81452 2 270 1.57E-79 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1300 6aba674645604a20de741d229ceac323 272 Pfam PF00510 Cytochrome c oxidase subunit III 4 271 1.6E-76 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM833 0806f05b38c44d28944f19a95880e26a 175 Gene3D G3DSA:2.40.70.10 52 173 3.5E-33 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AM833 0806f05b38c44d28944f19a95880e26a 175 Pfam PF13975 gag-polyprotein putative aspartyl protease 72 160 7.9E-24 T 11-10-2018 AM833 0806f05b38c44d28944f19a95880e26a 175 SUPERFAMILY SSF50630 60 164 2.36E-20 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily AM833 0806f05b38c44d28944f19a95880e26a 175 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 57 173 1.0E-38 T 11-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal AM833 0806f05b38c44d28944f19a95880e26a 175 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 80 91 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 AM521 f4a1943543b3117f3eab3af43f9d60c5 288 Gene3D G3DSA:2.40.10.340 137 212 1.9E-10 T 11-10-2018 AM521 f4a1943543b3117f3eab3af43f9d60c5 288 Pfam PF04085 rod shape-determining protein MreC 151 261 8.1E-23 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 AM389 4e897ece149b3afb99112ce343e64d82 242 Gene3D G3DSA:3.30.930.10 3 194 1.9E-43 T 11-10-2018 AM389 4e897ece149b3afb99112ce343e64d82 242 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 6 232 4.9E-47 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 AM389 4e897ece149b3afb99112ce343e64d82 242 Gene3D G3DSA:2.30.30.100 196 240 1.1E-5 T 11-10-2018 AM389 4e897ece149b3afb99112ce343e64d82 242 SUPERFAMILY SSF55681 2 193 1.7E-45 T 11-10-2018 AM389 4e897ece149b3afb99112ce343e64d82 242 Pfam PF03099 Biotin/lipoate A/B protein ligase family 17 138 2.5E-18 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 247 3.5E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 263 283 3.5E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 147 3.5E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 228 3.5E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 65 82 3.5E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 199 3.5E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 64 245 7.0E-5 T 11-10-2018 AM584 bc28d549e0dbbe3107809980037b2aad 302 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 196 224 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AM584 bc28d549e0dbbe3107809980037b2aad 302 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 70 299 3.3E-65 T 11-10-2018 AM584 bc28d549e0dbbe3107809980037b2aad 302 SUPERFAMILY SSF51735 63 301 1.43E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM584 bc28d549e0dbbe3107809980037b2aad 302 Gene3D G3DSA:3.40.50.720 55 301 6.1E-84 T 11-10-2018 AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 189 197 4.9E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 147 4.9E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 209 228 4.9E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR AM584 bc28d549e0dbbe3107809980037b2aad 302 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 67 299 3.1E-90 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 AM019 642162823c326f3d3aafe82a047d587b 109 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 8 77 1.5E-17 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM019 642162823c326f3d3aafe82a047d587b 109 PRINTS PR01651 Protein-export SecG membrane protein signature 60 82 1.8E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM019 642162823c326f3d3aafe82a047d587b 109 PRINTS PR01651 Protein-export SecG membrane protein signature 8 28 1.8E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM019 642162823c326f3d3aafe82a047d587b 109 PRINTS PR01651 Protein-export SecG membrane protein signature 44 60 1.8E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM019 642162823c326f3d3aafe82a047d587b 109 Pfam PF03840 Preprotein translocase SecG subunit 9 77 3.2E-15 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AM030 b59ffa6be611f1a6619d5875e16200c2 128 Pfam PF04956 TrbC/VIRB2 family 8 100 2.1E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM159 00ad939590b3365d9d08a94f42aa95ac 880 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 22 739 1.5E-179 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ AM159 00ad939590b3365d9d08a94f42aa95ac 880 Pfam PF11874 Domain of unknown function (DUF3394) 694 875 1.1E-33 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 AM159 00ad939590b3365d9d08a94f42aa95ac 880 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 130 682 8.2E-64 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit AM147 e8a56f36a3a2751da09d3c37c1db2cbe 185 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 25.66 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AM147 e8a56f36a3a2751da09d3c37c1db2cbe 185 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 13 182 5.9E-43 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 AM147 e8a56f36a3a2751da09d3c37c1db2cbe 185 SUPERFAMILY SSF51283 4 182 2.36E-43 T 11-10-2018 IPR036157 dUTPase-like superfamily AM147 e8a56f36a3a2751da09d3c37c1db2cbe 185 Gene3D G3DSA:2.70.40.10 1 156 1.9E-50 T 11-10-2018 IPR036157 dUTPase-like superfamily AM685 3f9431a17ac0c80b9f1027ac260fa3f5 160 Pfam PF00578 AhpC/TSA family 6 134 6.5E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM685 3f9431a17ac0c80b9f1027ac260fa3f5 160 Gene3D G3DSA:3.40.30.10 2 155 7.1E-46 T 11-10-2018 AM685 3f9431a17ac0c80b9f1027ac260fa3f5 160 SUPERFAMILY SSF52833 5 155 1.04E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM685 3f9431a17ac0c80b9f1027ac260fa3f5 160 PIRSF PIRSF000239 1 159 4.1E-27 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM781 bb197faa2cd3545438983edcea9d20cc 253 Pfam PF02167 Cytochrome C1 family 36 250 1.6E-92 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 Gene3D G3DSA:1.10.760.10 26 217 7.9E-79 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 SUPERFAMILY SSF46626 29 216 2.47E-64 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 132 156 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 198 217 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 34 53 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 178 197 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 54 73 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 99 119 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM781 bb197faa2cd3545438983edcea9d20cc 253 PRINTS PR00603 Cytochrome C1 signature 217 232 2.5E-61 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 AM1223 3af56eff1e956bcb8b93d02e527557e5 420 Pfam PF01617 Surface antigen 54 418 5.0E-23 T 11-10-2018 IPR002566 Surface antigen msp4 AM1005 a1806fef9709977c1cfb912e3bcea729 412 SUPERFAMILY SSF55021 251 326 4.04E-12 T 11-10-2018 AM1005 a1806fef9709977c1cfb912e3bcea729 412 Gene3D G3DSA:3.30.70.260 259 404 1.7E-41 T 11-10-2018 AM1005 a1806fef9709977c1cfb912e3bcea729 412 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM1005 a1806fef9709977c1cfb912e3bcea729 412 SUPERFAMILY SSF55021 330 406 6.11E-19 T 11-10-2018 AM1005 a1806fef9709977c1cfb912e3bcea729 412 PIRSF PIRSF000726 2 69 4.3E-14 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM1005 a1806fef9709977c1cfb912e3bcea729 412 PIRSF PIRSF000726 59 410 1.4E-98 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM1005 a1806fef9709977c1cfb912e3bcea729 412 SUPERFAMILY SSF53633 5 244 1.44E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM1005 a1806fef9709977c1cfb912e3bcea729 412 Pfam PF13840 ACT domain 338 400 2.0E-9 T 11-10-2018 IPR027795 CASTOR, ACT domain AM1005 a1806fef9709977c1cfb912e3bcea729 412 Gene3D G3DSA:3.30.70.260 264 339 1.7E-41 T 11-10-2018 AM1005 a1806fef9709977c1cfb912e3bcea729 412 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 403 1.1E-104 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 AM1005 a1806fef9709977c1cfb912e3bcea729 412 PRINTS PR00474 Glutamate 5-kinase family signature 112 133 5.3E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM1005 a1806fef9709977c1cfb912e3bcea729 412 PRINTS PR00474 Glutamate 5-kinase family signature 207 227 5.3E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM1005 a1806fef9709977c1cfb912e3bcea729 412 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 5.3E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM1005 a1806fef9709977c1cfb912e3bcea729 412 PRINTS PR00474 Glutamate 5-kinase family signature 34 48 5.3E-5 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 AM1005 a1806fef9709977c1cfb912e3bcea729 412 Gene3D G3DSA:3.40.1160.10 3 258 1.3E-73 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily AM1005 a1806fef9709977c1cfb912e3bcea729 412 Pfam PF00696 Amino acid kinase family 4 232 1.1E-39 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 AM623 590f5dda1e444be441daccdfa649ca9e 398 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 14 398 8.0E-182 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM623 590f5dda1e444be441daccdfa649ca9e 398 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 51 62 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM623 590f5dda1e444be441daccdfa649ca9e 398 Gene3D G3DSA:1.10.645.20 12 398 6.6E-181 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM623 590f5dda1e444be441daccdfa649ca9e 398 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 4 398 49.134 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM623 590f5dda1e444be441daccdfa649ca9e 398 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 128 398 2.2E-126 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM623 590f5dda1e444be441daccdfa649ca9e 398 SUPERFAMILY SSF56762 24 398 4.97E-142 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM826 86fb0377b9ae0e12485350c53f7b1e21 134 TIGRFAM TIGR00009 L28: ribosomal protein bL28 33 89 5.8E-18 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM826 86fb0377b9ae0e12485350c53f7b1e21 134 Gene3D G3DSA:2.30.170.40 39 130 6.5E-25 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM826 86fb0377b9ae0e12485350c53f7b1e21 134 Pfam PF00830 Ribosomal L28 family 34 91 4.6E-21 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM826 86fb0377b9ae0e12485350c53f7b1e21 134 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 32 99 17.36 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM826 86fb0377b9ae0e12485350c53f7b1e21 134 SUPERFAMILY SSF143800 32 114 2.75E-22 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 11 424 3.5E-187 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 11 262 8.5E-52 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 Gene3D G3DSA:3.40.47.10 272 416 4.1E-56 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 SUPERFAMILY SSF53901 230 425 4.37E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 PIRSF PIRSF000447 7 427 2.4E-174 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 SMART SM00825 Beta-ketoacyl synthase 12 427 2.2E-15 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 SUPERFAMILY SSF53901 10 267 1.55E-71 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 Gene3D G3DSA:3.40.47.10 3 270 7.2E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 AM338 873a5929b4bf8482b6dc21c6b4e38f59 427 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 270 384 1.3E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal AM245 23b5a34b4c95f85554c8346c82a2bc65 542 Gene3D G3DSA:3.10.20.580 444 536 3.5E-5 T 11-10-2018 AM245 23b5a34b4c95f85554c8346c82a2bc65 542 Gene3D G3DSA:3.40.50.10710 205 354 1.0E-150 T 11-10-2018 AM245 23b5a34b4c95f85554c8346c82a2bc65 542 SUPERFAMILY SSF56281 9 419 2.16E-75 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM245 23b5a34b4c95f85554c8346c82a2bc65 542 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 350 405 4.6E-8 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AM245 23b5a34b4c95f85554c8346c82a2bc65 542 Gene3D G3DSA:3.60.15.10 10 422 1.0E-150 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM245 23b5a34b4c95f85554c8346c82a2bc65 542 Pfam PF00753 Metallo-beta-lactamase superfamily 21 161 2.7E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase AM245 23b5a34b4c95f85554c8346c82a2bc65 542 SMART SM00849 19 213 9.6E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase AM686 ba31eb29001298080166e832d51d1519 260 Gene3D G3DSA:3.40.1280.10 98 259 5.4E-38 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM686 ba31eb29001298080166e832d51d1519 260 Pfam PF04452 RNA methyltransferase 43 254 3.4E-49 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AM686 ba31eb29001298080166e832d51d1519 260 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 29 256 1.1E-37 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AM686 ba31eb29001298080166e832d51d1519 260 PIRSF PIRSF015601 28 259 5.5E-54 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 AM686 ba31eb29001298080166e832d51d1519 260 SUPERFAMILY SSF88697 28 94 2.73E-14 T 11-10-2018 IPR015947 PUA-like superfamily AM686 ba31eb29001298080166e832d51d1519 260 SUPERFAMILY SSF75217 102 255 4.45E-39 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AM686 ba31eb29001298080166e832d51d1519 260 Gene3D G3DSA:2.40.240.20 28 95 5.9E-16 T 11-10-2018 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 Gene3D G3DSA:2.60.410.10 273 362 1.3E-18 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 SMART SM00936 273 363 4.5E-24 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 SUPERFAMILY SSF56601 3 273 1.77E-68 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like AM1091 14d505ca5ab87d58507b2069f3e96d71 380 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 361 3.4E-15 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 9.4E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 9.4E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 9.4E-14 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 SUPERFAMILY SSF69189 273 364 8.63E-22 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 250 2.7E-60 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AM1091 14d505ca5ab87d58507b2069f3e96d71 380 Gene3D G3DSA:3.40.710.10 21 272 4.7E-73 T 11-10-2018 AM918 eee41347b4c5dfe402856b484098ff39 293 Pfam PF01343 Peptidase family S49 112 259 6.6E-41 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AM918 eee41347b4c5dfe402856b484098ff39 293 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 54 255 8.5E-60 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AM918 eee41347b4c5dfe402856b484098ff39 293 Gene3D G3DSA:3.40.1750.20 149 215 2.7E-60 T 11-10-2018 AM918 eee41347b4c5dfe402856b484098ff39 293 SUPERFAMILY SSF52096 41 245 2.44E-39 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily AM918 eee41347b4c5dfe402856b484098ff39 293 Gene3D G3DSA:3.90.226.10 57 253 2.7E-60 T 11-10-2018 AM463 2f6611ac8e1d23b056e6c09e506742d3 234 Pfam PF02666 Phosphatidylserine decarboxylase 46 215 1.2E-28 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 AM463 2f6611ac8e1d23b056e6c09e506742d3 234 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 13 219 2.8E-49 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM463 2f6611ac8e1d23b056e6c09e506742d3 234 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 12 219 32.797 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 111 132 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 Gene3D G3DSA:3.30.460.80 1 130 5.1E-37 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 1 158 28.956 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 79 137 1.0E-29 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 SUPERFAMILY SSF143243 5 183 6.15E-53 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 151 5.5E-41 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM452 d8227507e3eb2f5d9b932f00e0ee56a7 187 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 150 2.3E-42 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SUPERFAMILY SSF48403 1546 1952 9.66E-11 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 1303 1332 0.0025 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 863 895 3400.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 1901 1940 3.4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 1868 1897 350.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 778 809 310.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 154 183 1100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 1114 1143 1.3 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 537 566 380.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SMART SM00248 1546 1578 44.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM638 ba28d482a8c6bf299224171f17ea3850 3194 SUPERFAMILY SSF48403 1112 1572 1.08E-11 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM638 ba28d482a8c6bf299224171f17ea3850 3194 SUPERFAMILY SSF48403 12 259 4.62E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM638 ba28d482a8c6bf299224171f17ea3850 3194 Gene3D G3DSA:1.25.40.20 4 288 5.5E-11 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM037 da6044d46f916326d3af85da73a994cb 264 Hamap MF_00443 Thiazole synthase [thiG]. 7 261 38.584 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM037 da6044d46f916326d3af85da73a994cb 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 10 255 3.9E-97 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 AM037 da6044d46f916326d3af85da73a994cb 264 Gene3D G3DSA:3.20.20.70 1 259 4.9E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM037 da6044d46f916326d3af85da73a994cb 264 SUPERFAMILY SSF110399 7 247 2.62E-80 T 11-10-2018 AM515 d0d600810574509fc9070f3040c7e4c4 206 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 44 57 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 AM515 d0d600810574509fc9070f3040c7e4c4 206 Gene3D G3DSA:3.40.640.10 3 94 1.8E-56 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM515 d0d600810574509fc9070f3040c7e4c4 206 Pfam PF00155 Aminotransferase class I and II 7 198 4.6E-30 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM515 d0d600810574509fc9070f3040c7e4c4 206 SUPERFAMILY SSF53383 7 202 2.09E-46 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM515 d0d600810574509fc9070f3040c7e4c4 206 Gene3D G3DSA:3.90.1150.10 95 198 1.8E-56 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM1270 9b9b8154631af4abadfb8b579c6c656e 235 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 24 218 1.0E-50 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM1270 9b9b8154631af4abadfb8b579c6c656e 235 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 235 92.364 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM1270 9b9b8154631af4abadfb8b579c6c656e 235 PIRSF PIRSF000386 1 234 1.9E-87 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM1270 9b9b8154631af4abadfb8b579c6c656e 235 SUPERFAMILY SSF75217 1 227 1.18E-88 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases AM1270 9b9b8154631af4abadfb8b579c6c656e 235 Gene3D G3DSA:3.40.1280.10 1 173 1.2E-68 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AM1270 9b9b8154631af4abadfb8b579c6c656e 235 Gene3D G3DSA:1.10.1270.20 174 230 4.4E-22 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM1270 9b9b8154631af4abadfb8b579c6c656e 235 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 225 2.4E-77 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 Gene3D G3DSA:1.10.520.20 14 105 2.5E-6 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 Pfam PF00213 ATP synthase delta (OSCP) subunit 14 181 3.2E-35 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 Hamap MF_01416 ATP synthase subunit delta [atpD]. 10 185 15.131 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 PRINTS PR00125 ATP synthase delta subunit signature 143 158 1.2E-9 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 PRINTS PR00125 ATP synthase delta subunit signature 14 33 1.2E-9 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 PRINTS PR00125 ATP synthase delta subunit signature 158 176 1.2E-9 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 PRINTS PR00125 ATP synthase delta subunit signature 93 107 1.2E-9 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 SUPERFAMILY SSF47928 14 113 3.01E-15 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM1175 0fc2781b5defc4c6864038e79c64ef1e 190 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 14 181 4.3E-20 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM087 db293ccb0f9ed3eb0c37c5e4310f1adf 200 Gene3D G3DSA:3.40.50.2020 10 199 8.0E-48 T 11-10-2018 AM087 db293ccb0f9ed3eb0c37c5e4310f1adf 200 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 12 197 4.7E-54 T 11-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 AM087 db293ccb0f9ed3eb0c37c5e4310f1adf 200 Pfam PF00156 Phosphoribosyl transferase domain 54 161 2.2E-13 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM087 db293ccb0f9ed3eb0c37c5e4310f1adf 200 SUPERFAMILY SSF53271 6 157 3.02E-34 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AM087 db293ccb0f9ed3eb0c37c5e4310f1adf 200 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 200 21.869 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 AM454 80e67f484aa785694b9d0df4151467af 135 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 17 135 16.996 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 AM454 80e67f484aa785694b9d0df4151467af 135 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 38 134 9.0E-31 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM454 80e67f484aa785694b9d0df4151467af 135 Gene3D G3DSA:1.20.58.1610 16 135 1.9E-35 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM1179 262e323b740216723fc537b09e54c881 83 Pfam PF07330 Protein of unknown function (DUF1467) 3 72 4.8E-14 T 11-10-2018 IPR009935 Protein of unknown function DUF1467 AM692 7ae7f193d9413daa966cc1cce550e346 338 Gene3D G3DSA:1.20.58.410 1 80 1.6E-11 T 11-10-2018 AM692 7ae7f193d9413daa966cc1cce550e346 338 Pfam PF00472 RF-1 domain 195 305 3.6E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM692 7ae7f193d9413daa966cc1cce550e346 338 Pfam PF03462 PCRF domain 2 187 2.2E-51 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AM692 7ae7f193d9413daa966cc1cce550e346 338 SMART SM00937 49 162 9.4E-44 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 AM692 7ae7f193d9413daa966cc1cce550e346 338 Gene3D G3DSA:3.30.70.1660 96 325 3.1E-95 T 11-10-2018 AM692 7ae7f193d9413daa966cc1cce550e346 338 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 212 228 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AM692 7ae7f193d9413daa966cc1cce550e346 338 SUPERFAMILY SSF75620 2 333 1.44E-122 T 11-10-2018 AM692 7ae7f193d9413daa966cc1cce550e346 338 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 333 35.559 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AM692 7ae7f193d9413daa966cc1cce550e346 338 Gene3D G3DSA:3.30.160.20 193 288 3.1E-95 T 11-10-2018 AM692 7ae7f193d9413daa966cc1cce550e346 338 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 332 1.3E-140 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AM925 fd45d6315945dcb27fab0ae2204c04c9 307 SUPERFAMILY SSF117892 119 247 5.62E-15 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily AM925 fd45d6315945dcb27fab0ae2204c04c9 307 SMART SM00244 81 243 6.3E-17 T 11-10-2018 IPR001107 Band 7 domain AM925 fd45d6315945dcb27fab0ae2204c04c9 307 Pfam PF01145 SPFH domain / Band 7 family 87 255 1.0E-21 T 11-10-2018 IPR001107 Band 7 domain AM925 fd45d6315945dcb27fab0ae2204c04c9 307 Gene3D G3DSA:3.30.479.30 115 245 5.4E-14 T 11-10-2018 AM1133 a6a3b847d938f707ab14ef1b61fad974 586 Pfam PF01368 DHH family 97 186 9.6E-7 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 AM1133 a6a3b847d938f707ab14ef1b61fad974 586 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 43 582 4.5E-157 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AM1133 a6a3b847d938f707ab14ef1b61fad974 586 Gene3D G3DSA:3.10.310.30 345 467 5.1E-26 T 11-10-2018 AM1133 a6a3b847d938f707ab14ef1b61fad974 586 Pfam PF02272 DHHA1 domain 341 462 5.7E-19 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 AM1133 a6a3b847d938f707ab14ef1b61fad974 586 Gene3D G3DSA:3.90.1640.30 72 344 9.7E-81 T 11-10-2018 AM1133 a6a3b847d938f707ab14ef1b61fad974 586 SUPERFAMILY SSF64182 71 465 1.83E-107 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily AM815 085ade6ddc96b73693bb98be9cc4eedf 98 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 8 90 6.9E-24 T 11-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB AM1311 8a2371879622793cad57d6c0e9fff52c 85 SUPERFAMILY SSF55200 14 74 7.72E-17 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AM1311 8a2371879622793cad57d6c0e9fff52c 85 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 14 74 1.1E-18 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 AM1311 8a2371879622793cad57d6c0e9fff52c 85 Gene3D G3DSA:3.30.110.10 12 81 2.4E-18 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 AM844 a4837d9a1c00c000e3e0cb278bd83626 619 SUPERFAMILY SSF50249 45 189 5.7E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold AM844 a4837d9a1c00c000e3e0cb278bd83626 619 Pfam PF10150 Ribonuclease E/G family 188 458 2.9E-88 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 AM844 a4837d9a1c00c000e3e0cb278bd83626 619 Gene3D G3DSA:3.40.1260.20 467 566 1.3E-14 T 11-10-2018 AM844 a4837d9a1c00c000e3e0cb278bd83626 619 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 19 490 1.4E-141 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 Pfam PF01782 RimM N-terminal domain 28 105 1.8E-16 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 Pfam PF05239 PRC-barrel domain 112 183 2.1E-6 T 11-10-2018 IPR027275 PRC-barrel domain AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 Gene3D G3DSA:2.40.30.60 24 109 3.7E-16 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 Gene3D G3DSA:2.30.30.240 110 186 5.0E-8 T 11-10-2018 AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 25 183 3.9E-35 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 SUPERFAMILY SSF50346 115 183 1.33E-10 T 11-10-2018 IPR011033 PRC-barrel-like superfamily AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 SUPERFAMILY SSF50447 24 108 2.83E-15 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily AM1269 70f5b5fa7249b148e98d0c8a467a68f6 190 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 25 185 21.369 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AM856 229df4a632b5c409d6439262d7aa4e96 445 Pfam PF00709 Adenylosuccinate synthetase 23 441 4.7E-154 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM856 229df4a632b5c409d6439262d7aa4e96 445 Gene3D G3DSA:3.40.440.10 24 274 1.9E-84 T 11-10-2018 AM856 229df4a632b5c409d6439262d7aa4e96 445 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 152 163 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM856 229df4a632b5c409d6439262d7aa4e96 445 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 29 36 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM856 229df4a632b5c409d6439262d7aa4e96 445 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 445 171.715 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM856 229df4a632b5c409d6439262d7aa4e96 445 SMART SM00788 22 442 3.2E-244 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM856 229df4a632b5c409d6439262d7aa4e96 445 Gene3D G3DSA:3.90.170.10 285 444 8.2E-59 T 11-10-2018 AM856 229df4a632b5c409d6439262d7aa4e96 445 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 24 441 5.0E-140 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 AM856 229df4a632b5c409d6439262d7aa4e96 445 Gene3D G3DSA:1.10.300.10 127 225 1.9E-84 T 11-10-2018 AM856 229df4a632b5c409d6439262d7aa4e96 445 SUPERFAMILY SSF52540 19 441 2.02E-154 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM070 88da6e98b6ed5f1b79e7c2b4a51dd795 59 Pfam PF03966 Trm112p-like protein 3 42 2.4E-7 T 11-10-2018 IPR005651 Trm112-like AM070 88da6e98b6ed5f1b79e7c2b4a51dd795 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 25.72 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 AM070 88da6e98b6ed5f1b79e7c2b4a51dd795 59 SUPERFAMILY SSF158997 2 56 7.19E-19 T 11-10-2018 AM070 88da6e98b6ed5f1b79e7c2b4a51dd795 59 Gene3D G3DSA:2.20.25.10 9 59 1.3E-20 T 11-10-2018 AM1140 716f0031816cd956a3bd160c60d64486 312 Pfam PF01617 Surface antigen 116 308 6.0E-16 T 11-10-2018 IPR002566 Surface antigen msp4 AM1140 716f0031816cd956a3bd160c60d64486 312 SUPERFAMILY SSF56925 121 273 8.89E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM923 832dfad79646552cc41950dc9d663705 354 Pfam PF03969 AFG1-like ATPase 9 353 2.6E-80 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 AM923 832dfad79646552cc41950dc9d663705 354 SUPERFAMILY SSF52540 52 200 2.76E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM923 832dfad79646552cc41950dc9d663705 354 Gene3D G3DSA:3.40.50.300 12 176 6.4E-17 T 11-10-2018 AM1349 acbb5fded312cf5e50213516656f93b2 187 SUPERFAMILY SSF52833 5 186 3.75E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM1349 acbb5fded312cf5e50213516656f93b2 187 Pfam PF00578 AhpC/TSA family 14 132 2.0E-13 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 AM1349 acbb5fded312cf5e50213516656f93b2 187 Gene3D G3DSA:3.40.30.10 6 187 5.9E-39 T 11-10-2018 AM220 1ca5807d29944555f667668ccacb3eb3 287 Gene3D G3DSA:3.60.15.10 21 287 3.6E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM220 1ca5807d29944555f667668ccacb3eb3 287 SUPERFAMILY SSF56281 24 287 2.16E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like AM220 1ca5807d29944555f667668ccacb3eb3 287 Pfam PF12706 Beta-lactamase superfamily domain 69 254 7.8E-28 T 11-10-2018 IPR001279 Metallo-beta-lactamase AM220 1ca5807d29944555f667668ccacb3eb3 287 SMART SM00849 57 233 7.7E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase AM145 e604fcc9f94925daff181ebb93ad7b18 428 Gene3D G3DSA:3.65.10.10 24 239 3.5E-153 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM145 e604fcc9f94925daff181ebb93ad7b18 428 Gene3D G3DSA:3.65.10.10 13 424 3.5E-153 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM145 e604fcc9f94925daff181ebb93ad7b18 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 3 427 39.572 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM145 e604fcc9f94925daff181ebb93ad7b18 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 417 3.7E-86 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM145 e604fcc9f94925daff181ebb93ad7b18 428 SUPERFAMILY SSF55205 11 427 1.24E-117 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM145 e604fcc9f94925daff181ebb93ad7b18 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 6 425 4.3E-148 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 AM077 26d3a898f1d24b6a073d9256d9d07bfa 133 Pfam PF04956 TrbC/VIRB2 family 11 103 1.3E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM150 bb0de13950b712c1bfb72695806f9159 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 619 633 5.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM150 bb0de13950b712c1bfb72695806f9159 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 637 647 5.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM150 bb0de13950b712c1bfb72695806f9159 695 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 666 5.8E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 AM150 bb0de13950b712c1bfb72695806f9159 695 PIRSF PIRSF037532 8 690 9.1E-188 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator AM150 bb0de13950b712c1bfb72695806f9159 695 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 686 1.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM150 bb0de13950b712c1bfb72695806f9159 695 Pfam PF00512 His Kinase A (phospho-acceptor) domain 468 535 7.2E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM150 bb0de13950b712c1bfb72695806f9159 695 SMART SM00304 293 348 2.9E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 AM150 bb0de13950b712c1bfb72695806f9159 695 SUPERFAMILY SSF47384 462 535 5.69E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 AM150 bb0de13950b712c1bfb72695806f9159 695 Gene3D G3DSA:3.30.565.10 540 687 1.2E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM150 bb0de13950b712c1bfb72695806f9159 695 SUPERFAMILY SSF55874 535 680 4.45E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily AM150 bb0de13950b712c1bfb72695806f9159 695 SMART SM00388 466 537 6.5E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AM150 bb0de13950b712c1bfb72695806f9159 695 Gene3D G3DSA:1.10.287.130 456 534 1.2E-12 T 11-10-2018 AM150 bb0de13950b712c1bfb72695806f9159 695 SMART SM00387 577 689 1.4E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase AM836 368db4afa76c0df79220533c1bd886d4 286 SUPERFAMILY SSF53098 10 237 3.99E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily AM836 368db4afa76c0df79220533c1bd886d4 286 Gene3D G3DSA:3.30.420.10 40 228 7.2E-20 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 AM836 368db4afa76c0df79220533c1bd886d4 286 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 56 270 1.3E-78 T 11-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like AM052 8b6614f740f42e12f3206b1b7dabf7bf 205 Pfam PF06242 Protein of unknown function (DUF1013) 45 184 1.1E-59 T 11-10-2018 IPR010421 Protein of unknown function DUF1013 AM570 b92d737b12874a2d5ee928fd8bdf2961 146 PIRSF PIRSF005384 5 145 4.4E-48 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM570 b92d737b12874a2d5ee928fd8bdf2961 146 Pfam PF02502 Ribose/Galactose Isomerase 7 143 1.6E-44 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM570 b92d737b12874a2d5ee928fd8bdf2961 146 SUPERFAMILY SSF89623 6 144 1.06E-46 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM570 b92d737b12874a2d5ee928fd8bdf2961 146 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 7 143 9.1E-47 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM570 b92d737b12874a2d5ee928fd8bdf2961 146 Gene3D G3DSA:3.40.1400.10 2 144 2.8E-51 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 AM023 9e8bce445d67b3745c0a3e27a60ebe42 224 Pfam PF00005 ABC transporter 23 171 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM023 9e8bce445d67b3745c0a3e27a60ebe42 224 Gene3D G3DSA:3.40.50.300 2 224 5.8E-56 T 11-10-2018 AM023 9e8bce445d67b3745c0a3e27a60ebe42 224 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AM023 9e8bce445d67b3745c0a3e27a60ebe42 224 SMART SM00382 32 218 1.7E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain AM023 9e8bce445d67b3745c0a3e27a60ebe42 224 SUPERFAMILY SSF52540 4 223 8.57E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM025 760585816f8149acbde0dc893c4f3d58 906 Pfam PF13502 AsmA-like C-terminal region 677 848 8.3E-10 T 11-10-2018 IPR032712 AsmA-like, C-terminal AM425 4bce3cf3bf6134ad98226b444e62b633 460 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 94 181 4.5E-21 T 11-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AM425 4bce3cf3bf6134ad98226b444e62b633 460 Gene3D G3DSA:1.20.140.90 47 182 2.1E-21 T 11-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AM425 4bce3cf3bf6134ad98226b444e62b633 460 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 184 430 2.0E-102 T 11-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 AM425 4bce3cf3bf6134ad98226b444e62b633 460 Gene3D G3DSA:3.40.630.150 183 460 6.0E-106 T 11-10-2018 AM108 66c2075fd81a840629e4b62dc97b75d9 99 SUPERFAMILY SSF143800 27 98 2.12E-12 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM108 66c2075fd81a840629e4b62dc97b75d9 99 Pfam PF01197 Ribosomal protein L31 27 97 6.8E-15 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM108 66c2075fd81a840629e4b62dc97b75d9 99 Gene3D G3DSA:2.30.170.50 27 98 3.1E-9 T 11-10-2018 AM108 66c2075fd81a840629e4b62dc97b75d9 99 TIGRFAM TIGR00105 L31: ribosomal protein bL31 27 98 5.3E-12 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM555 b4da8c1258ff6563123b4a2921e20630 295 PIRSF PIRSF035875 23 295 4.2E-52 T 11-10-2018 IPR017039 Virulence factor BrkB AM555 b4da8c1258ff6563123b4a2921e20630 295 Pfam PF03631 Virulence factor BrkB 42 294 2.5E-51 T 11-10-2018 IPR017039 Virulence factor BrkB AM555 b4da8c1258ff6563123b4a2921e20630 295 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 39 292 1.8E-28 T 11-10-2018 IPR017039 Virulence factor BrkB AM665 ddb48184eddaea289a2f8f7077b61a09 128 Gene3D G3DSA:2.60.15.10 2 124 4.6E-14 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM665 ddb48184eddaea289a2f8f7077b61a09 128 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 81 2.3E-14 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM665 ddb48184eddaea289a2f8f7077b61a09 128 SUPERFAMILY SSF51344 3 84 3.01E-14 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 AM530 9c6d7de7005766668b01756fa27a3610 626 Pfam PF11670 Major surface protein 1a (MSP1a) 14 152 3.7E-81 T 11-10-2018 IPR021685 Major surface protein 1a (MSP1a) AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 301 7.9E-125 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 Gene3D G3DSA:3.40.50.20 12 106 1.6E-83 T 11-10-2018 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 Gene3D G3DSA:3.30.470.20 107 285 1.6E-83 T 11-10-2018 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 116 287 1.4E-57 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 SUPERFAMILY SSF56059 116 300 1.61E-45 T 11-10-2018 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 SUPERFAMILY SSF52440 2 114 6.91E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 Gene3D G3DSA:3.30.1490.20 129 192 1.6E-83 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 Hamap MF_00162 Glutathione synthetase [gshB]. 1 306 103.839 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM203 e27b2811d7bc1c5fa2b8f516294f59be 308 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 112 1.3E-26 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 AM330 ef81d870980bbac73e1e675c8d5664b9 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 94 216 3.2E-33 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel AM1257 5c9d261017c4fb3a930140b734b95ace 285 Pfam PF01617 Surface antigen 45 285 1.2E-34 T 11-10-2018 IPR002566 Surface antigen msp4 AM1257 5c9d261017c4fb3a930140b734b95ace 285 Gene3D G3DSA:2.40.160.20 101 253 1.7E-7 T 11-10-2018 AM1257 5c9d261017c4fb3a930140b734b95ace 285 SUPERFAMILY SSF56925 106 285 2.01E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1313 0a50098ef20bd45e6f2c9310b4b05c08 337 SUPERFAMILY SSF52540 14 316 9.93E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1313 0a50098ef20bd45e6f2c9310b4b05c08 337 Gene3D G3DSA:3.40.50.300 120 335 3.8E-68 T 11-10-2018 AM1313 0a50098ef20bd45e6f2c9310b4b05c08 337 Pfam PF00437 Type II/IV secretion system protein 18 317 2.9E-85 T 11-10-2018 IPR001482 Type II/IV secretion system protein AM1313 0a50098ef20bd45e6f2c9310b4b05c08 337 Gene3D G3DSA:3.30.450.90 12 118 6.5E-32 T 11-10-2018 AM1313 0a50098ef20bd45e6f2c9310b4b05c08 337 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 24 329 4.0E-131 T 11-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 AM130 2188742a2f30c30441645388269bd188 183 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 182 3.9E-51 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 AM130 2188742a2f30c30441645388269bd188 183 Pfam PF01765 Ribosome recycling factor 22 182 4.4E-47 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 AM130 2188742a2f30c30441645388269bd188 183 SUPERFAMILY SSF55194 1 182 1.44E-56 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 AM130 2188742a2f30c30441645388269bd188 183 Gene3D G3DSA:1.10.132.20 12 181 2.5E-53 T 11-10-2018 AM130 2188742a2f30c30441645388269bd188 183 Gene3D G3DSA:3.30.1360.40 31 104 2.5E-53 T 11-10-2018 AM1055 5c608ac3469d2ffa5535f2b2f13deb53 125 Pfam PF04956 TrbC/VIRB2 family 14 110 1.6E-18 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM299 9f730cc3cbc83e598333f39275060f1b 117 Pfam PF04384 Iron-sulphur cluster assembly 53 115 5.7E-28 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM299 9f730cc3cbc83e598333f39275060f1b 117 Gene3D G3DSA:1.10.10.600 48 116 1.8E-26 T 11-10-2018 IPR036762 IscX-like superfamily AM299 9f730cc3cbc83e598333f39275060f1b 117 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 54 116 5.5E-31 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 AM299 9f730cc3cbc83e598333f39275060f1b 117 SUPERFAMILY SSF140319 52 114 6.28E-24 T 11-10-2018 IPR036762 IscX-like superfamily AM102 5ef469bc1259f522577606a9c1e8eafd 313 Gene3D G3DSA:3.40.50.1820 18 312 1.1E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM102 5ef469bc1259f522577606a9c1e8eafd 313 Pfam PF00561 alpha/beta hydrolase fold 57 184 1.3E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 AM102 5ef469bc1259f522577606a9c1e8eafd 313 SUPERFAMILY SSF53474 38 295 5.31E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM893 8f3876c3982ec15d7a4c48c8734b5f98 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 2.3E-40 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM893 8f3876c3982ec15d7a4c48c8734b5f98 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 141 1.3E-28 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P AM893 8f3876c3982ec15d7a4c48c8734b5f98 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 15.535 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AM893 8f3876c3982ec15d7a4c48c8734b5f98 146 Gene3D G3DSA:3.100.10.10 66 143 2.4E-12 T 11-10-2018 AM893 8f3876c3982ec15d7a4c48c8734b5f98 146 SUPERFAMILY SSF52080 4 141 5.1E-33 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily AM289 6c2db1f6dfa12b8a0a270f7302bcd265 462 SUPERFAMILY SSF55205 19 401 7.36E-55 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AM289 6c2db1f6dfa12b8a0a270f7302bcd265 462 Gene3D G3DSA:3.65.10.10 255 423 3.4E-19 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM289 6c2db1f6dfa12b8a0a270f7302bcd265 462 Gene3D G3DSA:3.65.10.10 37 254 7.5E-32 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 AM289 6c2db1f6dfa12b8a0a270f7302bcd265 462 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 28 394 2.0E-31 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 AM1312 2c8789c06f0889776701d5cd6cd44fd2 806 Gene3D G3DSA:3.40.50.300 326 560 1.4E-43 T 11-10-2018 AM1312 2c8789c06f0889776701d5cd6cd44fd2 806 SUPERFAMILY SSF52540 117 556 9.96E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM1312 2c8789c06f0889776701d5cd6cd44fd2 806 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 124 568 4.1E-150 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 AM457 353e0310bb7457d4267316fcbdc90956 177 Gene3D G3DSA:1.10.940.10 18 156 2.2E-25 T 11-10-2018 IPR035926 NusB-like superfamily AM457 353e0310bb7457d4267316fcbdc90956 177 Pfam PF01029 NusB family 22 151 2.1E-24 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AM457 353e0310bb7457d4267316fcbdc90956 177 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 152 5.5E-30 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 AM457 353e0310bb7457d4267316fcbdc90956 177 SUPERFAMILY SSF48013 18 151 7.85E-27 T 11-10-2018 IPR035926 NusB-like superfamily AM657 803a0fda3842137ecb2a6eb2ce2d3ff3 234 Gene3D G3DSA:3.40.50.1820 2 228 1.2E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM657 803a0fda3842137ecb2a6eb2ce2d3ff3 234 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 46 154 1.9E-9 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 AM657 803a0fda3842137ecb2a6eb2ce2d3ff3 234 SUPERFAMILY SSF53474 3 211 1.58E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM189 8c1ce60e89e2ab63e25109f1c0ade016 210 Gene3D G3DSA:3.40.50.1820 1 210 5.5E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM189 8c1ce60e89e2ab63e25109f1c0ade016 210 SUPERFAMILY SSF53474 9 198 1.18E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM189 8c1ce60e89e2ab63e25109f1c0ade016 210 Pfam PF12146 Serine aminopeptidase, S33 8 121 2.5E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AM189 8c1ce60e89e2ab63e25109f1c0ade016 210 Pfam PF12146 Serine aminopeptidase, S33 144 196 1.0E-6 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 AM238 1a7b974b0c8974e400cc279266d9524f 180 Pfam PF01292 Prokaryotic cytochrome b561 10 180 8.8E-28 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 AM238 1a7b974b0c8974e400cc279266d9524f 180 SUPERFAMILY SSF81342 10 167 1.26E-31 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 AM238 1a7b974b0c8974e400cc279266d9524f 180 Gene3D G3DSA:1.20.950.20 6 80 4.1E-8 T 11-10-2018 AM302 0f4d5cca9fbda4391a02d374752d11ba 382 SUPERFAMILY SSF55785 251 320 7.42E-6 T 11-10-2018 IPR035965 PAS domain superfamily AM188 2faafed9f9496c092b4a82998c11effa 149 Pfam PF03429 Major surface protein 1B 87 125 2.5E-17 T 11-10-2018 IPR005091 Major surface protein 1B AM188 2faafed9f9496c092b4a82998c11effa 149 Pfam PF03429 Major surface protein 1B 1 88 1.8E-52 T 11-10-2018 IPR005091 Major surface protein 1B AM397 46dc0505f8de3a448d221d544f5be058 245 SUPERFAMILY SSF52540 23 237 2.01E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM397 46dc0505f8de3a448d221d544f5be058 245 SMART SM00382 51 223 2.8E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain AM397 46dc0505f8de3a448d221d544f5be058 245 Gene3D G3DSA:3.40.50.300 18 242 1.4E-50 T 11-10-2018 AM397 46dc0505f8de3a448d221d544f5be058 245 Pfam PF00005 ABC transporter 43 172 2.1E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AM1212 86b4d24e193fb16c87cd94157aa3d8bc 259 Pfam PF02405 Permease MlaE 48 256 7.9E-73 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 AM830 10694f0c681eff3419817fd9a65535ad 267 Gene3D G3DSA:3.40.50.10090 34 143 3.7E-13 T 11-10-2018 AM830 10694f0c681eff3419817fd9a65535ad 267 SUPERFAMILY SSF69618 35 262 1.7E-37 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM830 10694f0c681eff3419817fd9a65535ad 267 Gene3D G3DSA:3.40.50.10090 144 262 3.6E-9 T 11-10-2018 AM830 10694f0c681eff3419817fd9a65535ad 267 Pfam PF02602 Uroporphyrinogen-III synthase HemD 50 258 3.3E-37 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 AM809 549265e4f4a235c3fd285eed06234d25 205 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 9 204 3.4E-60 T 11-10-2018 IPR011740 Protein of unknown function DUF2460 AM809 549265e4f4a235c3fd285eed06234d25 205 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 9 203 7.4E-71 T 11-10-2018 IPR011740 Protein of unknown function DUF2460 AM119 443c1adac02c32f0fdc50c5a46715f6f 467 Gene3D G3DSA:3.20.20.70 15 467 2.9E-21 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM119 443c1adac02c32f0fdc50c5a46715f6f 467 Pfam PF03060 Nitronate monooxygenase 143 349 2.1E-8 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AM119 443c1adac02c32f0fdc50c5a46715f6f 467 SUPERFAMILY SSF51412 17 311 4.4E-7 T 11-10-2018 AM888 c0976746cc9ef9c553bb5fd14e26a8d4 113 Pfam PF00411 Ribosomal protein S11 2 112 3.4E-37 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM888 c0976746cc9ef9c553bb5fd14e26a8d4 113 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 1 113 27.274 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM888 c0976746cc9ef9c553bb5fd14e26a8d4 113 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 2 110 3.8E-47 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM888 c0976746cc9ef9c553bb5fd14e26a8d4 113 PIRSF PIRSF002131 1 113 2.6E-42 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AM888 c0976746cc9ef9c553bb5fd14e26a8d4 113 SUPERFAMILY SSF53137 2 113 1.24E-37 T 11-10-2018 AM888 c0976746cc9ef9c553bb5fd14e26a8d4 113 Gene3D G3DSA:3.30.420.80 1 113 1.2E-41 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 AM432 e1ac098853c0b5f0c65b25aa51baa164 234 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 57 115 2.2E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM432 e1ac098853c0b5f0c65b25aa51baa164 234 SUPERFAMILY SSF52374 57 231 8.13E-37 T 11-10-2018 AM432 e1ac098853c0b5f0c65b25aa51baa164 234 Pfam PF01467 Cytidylyltransferase-like 59 230 2.5E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AM432 e1ac098853c0b5f0c65b25aa51baa164 234 Gene3D G3DSA:3.40.50.620 56 233 8.2E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AM504 9ca437aa1bf145067826af9982d7fea7 158 SUPERFAMILY SSF101738 3 116 3.14E-38 T 11-10-2018 IPR036760 SspB-like superfamily AM504 9ca437aa1bf145067826af9982d7fea7 158 Pfam PF04386 Stringent starvation protein B 12 117 7.9E-25 T 11-10-2018 IPR007481 Stringent starvation protein B AM504 9ca437aa1bf145067826af9982d7fea7 158 Gene3D G3DSA:2.30.30.220 1 117 7.7E-39 T 11-10-2018 IPR036760 SspB-like superfamily AM967 56302e56e173acec5a878d606bd7fd14 151 Pfam PF07310 PAS domain 12 145 3.6E-12 T 11-10-2018 IPR009922 Protein of unknown function DUF1457 AM074 9bb155226eebb21425e4be11cbd63bf3 151 Pfam PF02470 MlaD protein 42 116 6.7E-19 T 11-10-2018 IPR003399 Mce/MlaD AM074 9bb155226eebb21425e4be11cbd63bf3 151 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 146 4.1E-42 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 AM606 68925c4c58d5b51da806afb9c64d8bf0 178 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 166 3.6E-23 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM606 68925c4c58d5b51da806afb9c64d8bf0 178 PIRSF PIRSF006806 1 169 3.1E-29 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM606 68925c4c58d5b51da806afb9c64d8bf0 178 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 166 5.8E-31 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase AM606 68925c4c58d5b51da806afb9c64d8bf0 178 SUPERFAMILY SSF100950 3 172 6.84E-40 T 11-10-2018 IPR037171 NagB/RpiA transferase-like AM606 68925c4c58d5b51da806afb9c64d8bf0 178 Gene3D G3DSA:3.40.50.10420 3 177 1.8E-33 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily AM514 4c7e194f995eba6ad9fbb18e80fd0689 226 Pfam PF00155 Aminotransferase class I and II 49 226 5.5E-42 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AM514 4c7e194f995eba6ad9fbb18e80fd0689 226 Gene3D G3DSA:3.40.640.10 20 226 2.4E-62 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM514 4c7e194f995eba6ad9fbb18e80fd0689 226 SUPERFAMILY SSF53383 18 226 1.88E-62 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM907 60d13397b7fd982ed38af833dc6c384c 112 SUPERFAMILY SSF54843 3 109 1.26E-34 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AM907 60d13397b7fd982ed38af833dc6c384c 112 Pfam PF00237 Ribosomal protein L22p/L17e 7 108 1.0E-28 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AM907 60d13397b7fd982ed38af833dc6c384c 112 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 11 107 1.8E-30 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM907 60d13397b7fd982ed38af833dc6c384c 112 Gene3D G3DSA:3.90.470.10 2 112 2.7E-35 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 AM907 60d13397b7fd982ed38af833dc6c384c 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 23.567 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM953 c1f721c3eb5c834a16b35ab4197c0954 246 Gene3D G3DSA:2.60.130.10 39 233 4.3E-27 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM953 c1f721c3eb5c834a16b35ab4197c0954 246 SUPERFAMILY SSF49482 39 229 6.41E-33 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 AM953 c1f721c3eb5c834a16b35ab4197c0954 246 Pfam PF00775 Dioxygenase 63 194 6.4E-9 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 AM586 f590546e45e17caaf4dde89f2aeaeb91 110 Gene3D G3DSA:1.10.2060.10 57 110 2.7E-20 T 11-10-2018 AM586 f590546e45e17caaf4dde89f2aeaeb91 110 SUPERFAMILY SSF81935 9 108 7.45E-35 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM586 f590546e45e17caaf4dde89f2aeaeb91 110 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 65 108 5.0E-19 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 AM497 766ecec7e7dba9d8ea4feab4d8a1591c 118 SUPERFAMILY SSF54913 3 102 4.08E-30 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta AM497 766ecec7e7dba9d8ea4feab4d8a1591c 118 Gene3D G3DSA:3.30.70.120 1 110 4.9E-30 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal AM497 766ecec7e7dba9d8ea4feab4d8a1591c 118 Pfam PF03091 CutA1 divalent ion tolerance protein 7 102 6.5E-27 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 AM1314 5490b9ade1dac0e07e4454ae7509a911 445 Gene3D G3DSA:2.40.128.260 242 436 4.9E-38 T 11-10-2018 AM1314 5490b9ade1dac0e07e4454ae7509a911 445 Gene3D G3DSA:1.10.1200.160 381 417 4.9E-38 T 11-10-2018 AM1314 5490b9ade1dac0e07e4454ae7509a911 445 Pfam PF03743 Bacterial conjugation TrbI-like protein 239 438 6.9E-46 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI AM114 8e6fce386bb3a80351b9c0144c40dc9d 175 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 157 1.7E-34 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM114 8e6fce386bb3a80351b9c0144c40dc9d 175 Gene3D G3DSA:3.10.420.10 7 173 6.5E-50 T 11-10-2018 IPR035958 SecB-like superfamily AM114 8e6fce386bb3a80351b9c0144c40dc9d 175 Hamap MF_00821 Protein-export protein SecB [secB]. 8 162 27.39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM114 8e6fce386bb3a80351b9c0144c40dc9d 175 Pfam PF02556 Preprotein translocase subunit SecB 12 158 1.1E-45 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 AM114 8e6fce386bb3a80351b9c0144c40dc9d 175 SUPERFAMILY SSF54611 13 158 3.71E-40 T 11-10-2018 IPR035958 SecB-like superfamily AM476 a149525dc41b1fcd1cdb7eb4dba289b0 128 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 30 49 1.1E-6 T 11-10-2018 AM476 a149525dc41b1fcd1cdb7eb4dba289b0 128 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 10 30 1.1E-6 T 11-10-2018 AM884 9795805c3e2a01edec573181121b16dd 748 Pfam PF13567 Domain of unknown function (DUF4131) 61 210 4.6E-8 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 AM884 9795805c3e2a01edec573181121b16dd 748 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 276 459 1.9E-26 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AM884 9795805c3e2a01edec573181121b16dd 748 Pfam PF03772 Competence protein 254 526 2.5E-53 T 11-10-2018 IPR004477 ComEC/Rec2-related protein AM849 40087dc56404dddc110774438affb694 99 Pfam PF03334 Na+/H+ antiporter subunit 10 87 6.0E-18 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 AM088 6d80a6ab7265dd3787895d834eee6eee 268 Pfam PF00899 ThiF family 12 247 1.0E-63 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AM088 6d80a6ab7265dd3787895d834eee6eee 268 SUPERFAMILY SSF69572 10 250 2.35E-78 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 AM088 6d80a6ab7265dd3787895d834eee6eee 268 Gene3D G3DSA:3.40.50.720 7 253 1.4E-79 T 11-10-2018 AM391 a3542d0a5e91f1b1601fb355e390f411 180 Pfam PF11412 Disulphide bond corrector protein DsbC 49 156 1.9E-10 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain AM097 5e824e36a19aab7035b23d3e3aed753f 270 Pfam PF03524 Conjugal transfer protein 32 256 2.9E-62 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AM097 5e824e36a19aab7035b23d3e3aed753f 270 Gene3D G3DSA:2.60.40.2500 156 269 7.7E-30 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily AM097 5e824e36a19aab7035b23d3e3aed753f 270 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 5 257 4.7E-68 T 11-10-2018 IPR014148 P-type conjugative transfer protein VirB9 AM316 41dbb615242338c898cfbdcf042f02f6 291 Pfam PF03618 Kinase/pyrophosphorylase 21 276 1.4E-84 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 AM316 41dbb615242338c898cfbdcf042f02f6 291 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 19 281 54.231 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein AM1063 5be85e3dea45b84368bc01931f8f65e1 943 Pfam PF01617 Surface antigen 787 943 1.5E-64 T 11-10-2018 IPR002566 Surface antigen msp4 AM1063 5be85e3dea45b84368bc01931f8f65e1 943 Pfam PF01617 Surface antigen 53 156 1.7E-16 T 11-10-2018 IPR002566 Surface antigen msp4 AM1063 5be85e3dea45b84368bc01931f8f65e1 943 Gene3D G3DSA:2.40.160.20 775 911 2.6E-11 T 11-10-2018 AM1063 5be85e3dea45b84368bc01931f8f65e1 943 SUPERFAMILY SSF56925 824 943 8.11E-16 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1194 79a55b438f2d2ab176b48818fe968963 272 Pfam PF01791 DeoC/LacD family aldolase 14 255 2.0E-31 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM1194 79a55b438f2d2ab176b48818fe968963 272 Gene3D G3DSA:3.20.20.70 3 272 2.7E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 AM1194 79a55b438f2d2ab176b48818fe968963 272 SMART SM01133 13 255 7.4E-46 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM1194 79a55b438f2d2ab176b48818fe968963 272 SUPERFAMILY SSF51569 6 271 3.17E-63 T 11-10-2018 AM1194 79a55b438f2d2ab176b48818fe968963 272 PIRSF PIRSF038992 2 271 7.1E-60 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 AM757 a6d8190af47ee535325b4e8d32efc19b 251 Gene3D G3DSA:3.10.450.230 113 250 1.7E-20 T 11-10-2018 AM757 a6d8190af47ee535325b4e8d32efc19b 251 SUPERFAMILY SSF54427 113 249 1.23E-7 T 11-10-2018 IPR032710 NTF2-like domain superfamily AM927 c6c095a9fca0a943f8b9ed4e5e33e76a 867 Pfam PF13361 UvrD-like helicase C-terminal domain 437 818 3.5E-14 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AM927 c6c095a9fca0a943f8b9ed4e5e33e76a 867 SUPERFAMILY SSF52540 5 823 6.39E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase AM927 c6c095a9fca0a943f8b9ed4e5e33e76a 867 Gene3D G3DSA:3.40.50.300 520 621 1.4E-10 T 11-10-2018 AM927 c6c095a9fca0a943f8b9ed4e5e33e76a 867 Gene3D G3DSA:3.40.50.300 309 459 2.7E-29 T 11-10-2018 AM927 c6c095a9fca0a943f8b9ed4e5e33e76a 867 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 425 1.5E-47 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 AM927 c6c095a9fca0a943f8b9ed4e5e33e76a 867 Gene3D G3DSA:3.40.50.300 703 852 2.4E-18 T 11-10-2018 AM640 8e37f9fd334ffb13e435621ca836aece 352 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 16 347 24.524 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM640 8e37f9fd334ffb13e435621ca836aece 352 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 228 241 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM640 8e37f9fd334ffb13e435621ca836aece 352 Pfam PF00146 NADH dehydrogenase 22 340 6.8E-123 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM640 8e37f9fd334ffb13e435621ca836aece 352 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 59 74 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM717 e13cec1cf0102acc0b146a37fdb9061b 123 Pfam PF04956 TrbC/VIRB2 family 7 95 6.5E-16 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM175 51d7492720f98d827585d04714dafe68 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 5.4E-45 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 50 67 5.4E-45 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 5.4E-45 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 5.4E-45 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 67 87 5.4E-45 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 5.4E-45 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 50 231 1.9E-64 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 AM175 51d7492720f98d827585d04714dafe68 250 Pfam PF01578 Cytochrome C assembly protein 26 188 8.3E-26 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 AM148 c0dd244fc598b42f896314d349d3708c 281 SUPERFAMILY SSF51735 13 274 5.04E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily AM148 c0dd244fc598b42f896314d349d3708c 281 Gene3D G3DSA:3.40.50.720 3 274 8.8E-73 T 11-10-2018 AM284 92ec75cc0dcd07830cc05d383432aaa2 408 Gene3D G3DSA:3.40.640.10 28 274 2.7E-52 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 AM284 92ec75cc0dcd07830cc05d383432aaa2 408 SUPERFAMILY SSF53383 73 405 2.19E-66 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase AM284 92ec75cc0dcd07830cc05d383432aaa2 408 Gene3D G3DSA:3.90.1150.10 275 407 3.6E-26 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 AM284 92ec75cc0dcd07830cc05d383432aaa2 408 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 216 230 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM284 92ec75cc0dcd07830cc05d383432aaa2 408 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 38 404 3.5E-72 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM284 92ec75cc0dcd07830cc05d383432aaa2 408 PIRSF PIRSF001434 2 408 4.1E-102 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 AM926 8f2e06ca5f6ab7f082ed5e432f3d98a5 282 Pfam PF12796 Ankyrin repeats (3 copies) 209 268 1.8E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain AM926 8f2e06ca5f6ab7f082ed5e432f3d98a5 282 Gene3D G3DSA:1.25.40.20 157 275 7.5E-16 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM926 8f2e06ca5f6ab7f082ed5e432f3d98a5 282 SUPERFAMILY SSF48403 180 270 2.49E-14 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily AM926 8f2e06ca5f6ab7f082ed5e432f3d98a5 282 SMART SM00248 215 244 8.6E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM926 8f2e06ca5f6ab7f082ed5e432f3d98a5 282 SMART SM00248 248 277 180.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 SUPERFAMILY SSF103025 3 206 2.2E-51 T 11-10-2018 AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 Gene3D G3DSA:3.30.1360.120 143 267 1.6E-14 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 Gene3D G3DSA:3.30.1360.120 1 132 8.3E-24 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 151 214 6.9E-21 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 PIRSF PIRSF006487 1 138 1.1E-7 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 PIRSF PIRSF006487 146 237 8.5 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 AM1168 8b50036a977e23f4f29fa328ea8d95d1 271 Pfam PF01571 Aminomethyltransferase folate-binding domain 11 100 5.3E-10 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain AM1030 46a1f6c81130e2d8ca91a2aae360ef64 106 SUPERFAMILY SSF141000 12 104 2.62E-16 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 AM1030 46a1f6c81130e2d8ca91a2aae360ef64 106 Gene3D G3DSA:1.10.20.60 9 104 1.9E-12 T 11-10-2018 AM1030 46a1f6c81130e2d8ca91a2aae360ef64 106 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 29 100 1.0E-10 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AM276 d76661281f1fc1cec54d11b0adbc43c1 250 Pfam PF02230 Phospholipase/Carboxylesterase 46 242 2.8E-29 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 AM276 d76661281f1fc1cec54d11b0adbc43c1 250 SUPERFAMILY SSF53474 42 243 8.31E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM276 d76661281f1fc1cec54d11b0adbc43c1 250 Gene3D G3DSA:3.40.50.1820 44 245 1.7E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold AM748 b0ffbb2495fbca2d4ec15cff571840d6 200 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 161 2.5E-30 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM748 b0ffbb2495fbca2d4ec15cff571840d6 200 Gene3D G3DSA:1.20.120.1200 2 162 1.1E-36 T 11-10-2018 AM594 819f4ebb289107908ee2b43668716c48 119 Pfam PF04977 Septum formation initiator 40 117 4.6E-7 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC AM747 288879811a403f6da8fb9bdce21abcc1 108 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 9 108 17.982 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 AM747 288879811a403f6da8fb9bdce21abcc1 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 14 102 1.4E-20 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like AM591 9c0211107d46815918f8b2df7c2db756 276 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 271 5.0E-69 T 11-10-2018 AM591 9c0211107d46815918f8b2df7c2db756 276 SUPERFAMILY SSF56219 2 273 8.11E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM591 9c0211107d46815918f8b2df7c2db756 276 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 265 1.3E-18 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase AM591 9c0211107d46815918f8b2df7c2db756 276 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 272 5.2E-66 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 AM591 9c0211107d46815918f8b2df7c2db756 276 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 229 240 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 AM591 9c0211107d46815918f8b2df7c2db756 276 Gene3D G3DSA:3.60.10.10 2 272 2.3E-70 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily AM082 bd75726c04f3717399e57ae93cdaf104 135 Pfam PF04956 TrbC/VIRB2 family 27 107 6.6E-14 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM1088 d75a1adc3dcb0ac4a3b4125a64124c92 129 Gene3D G3DSA:2.160.10.10 3 129 2.2E-35 T 11-10-2018 AM1088 d75a1adc3dcb0ac4a3b4125a64124c92 129 SUPERFAMILY SSF51161 6 126 1.01E-29 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily AM026 ebd7ee89f40d026eebb4d3385a5ef679 504 Pfam PF00361 Proton-conducting membrane transporter 134 429 1.5E-55 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM026 ebd7ee89f40d026eebb4d3385a5ef679 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 1.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM026 ebd7ee89f40d026eebb4d3385a5ef679 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 1.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM026 ebd7ee89f40d026eebb4d3385a5ef679 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 334 353 1.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM026 ebd7ee89f40d026eebb4d3385a5ef679 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 387 413 1.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM026 ebd7ee89f40d026eebb4d3385a5ef679 504 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 1.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM557 aaf85d1b337dac0decfe35dd934532c5 111 Pfam PF05258 Protein of unknown function (DUF721) 17 109 2.9E-15 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 AM862 fc2cffde625bee0e891d710085bb478b 298 Gene3D G3DSA:3.10.50.40 190 285 3.8E-6 T 11-10-2018 AM862 fc2cffde625bee0e891d710085bb478b 298 SUPERFAMILY SSF54534 202 266 3.73E-8 T 11-10-2018 AM1258 60662b9d488033b5c1e3013fb0e16f59 352 Pfam PF01617 Surface antigen 66 352 3.4E-22 T 11-10-2018 IPR002566 Surface antigen msp4 AM1144 a9cbdb2d4518d894cbcf480fff59d13c 407 Pfam PF01617 Surface antigen 48 407 1.4E-110 T 11-10-2018 IPR002566 Surface antigen msp4 AM1144 a9cbdb2d4518d894cbcf480fff59d13c 407 SUPERFAMILY SSF56925 48 407 2.35E-18 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM562 a68c0d461d8ac32c140b0e1acbf919af 216 Pfam PF06271 RDD family 40 189 3.2E-19 T 11-10-2018 IPR010432 RDD AM270 ba1d045625a1ee96f0c886a3733dce24 175 Pfam PF01899 Na+/H+ ion antiporter subunit 16 153 1.8E-17 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 AM160 4f6b0bd30a8ea4bf661e33d9469fb046 195 Pfam PF02674 Colicin V production protein 3 156 2.4E-30 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AM1183 b6c10e54eca6be97804db47bc07e8fe1 408 Pfam PF12704 MacB-like periplasmic core domain 30 236 4.1E-18 T 11-10-2018 IPR025857 MacB-like periplasmic core domain AM1183 b6c10e54eca6be97804db47bc07e8fe1 408 Pfam PF02687 FtsX-like permease family 295 401 1.7E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 AM1183 b6c10e54eca6be97804db47bc07e8fe1 408 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 9 408 6.6E-117 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 SUPERFAMILY SSF143034 2 64 4.97E-18 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.341 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 3.6E-18 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 Gene3D G3DSA:2.40.50.530 1 65 9.1E-20 T 11-10-2018 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.4E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.4E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.4E-9 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AM053 fbcc4ff5d28714a4ef0de26838faf4f7 66 Pfam PF01632 Ribosomal protein L35 2 60 4.0E-16 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 AM989 308447cd991e4ac3162f605ea2decd08 124 Pfam PF04956 TrbC/VIRB2 family 7 97 5.0E-16 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM1145 37109f90128550fae3aa4f4a992d381f 164 SUPERFAMILY SSF46565 96 151 1.7E-9 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AM1145 37109f90128550fae3aa4f4a992d381f 164 Gene3D G3DSA:1.10.287.110 108 159 6.2E-10 T 11-10-2018 IPR036869 Chaperone J-domain superfamily AM139 715826e3db2946014d7a82bc131bc07b 251 Pfam PF13462 Thioredoxin 83 240 3.0E-18 T 11-10-2018 IPR012336 Thioredoxin-like fold AM139 715826e3db2946014d7a82bc131bc07b 251 SUPERFAMILY SSF52833 70 239 7.58E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily AM139 715826e3db2946014d7a82bc131bc07b 251 Gene3D G3DSA:3.40.30.10 73 248 3.6E-34 T 11-10-2018 AM811 b6dea681a193d86f7ca48ae666e459ed 1371 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 674 868 2.2E-17 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM1298 f6830c3197bcc58adeac8ac78351b18e 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 12 198 19.037 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM1298 f6830c3197bcc58adeac8ac78351b18e 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 17 189 1.9E-44 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM1298 f6830c3197bcc58adeac8ac78351b18e 198 SMART SM01207 15 190 7.4E-69 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM1298 f6830c3197bcc58adeac8ac78351b18e 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 13 197 4.1E-50 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 AM1149 84dbbb6499710b507eb0b8adf6615121 129 Pfam PF04956 TrbC/VIRB2 family 12 101 1.6E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM266 a03c6d621c40d39c3eedb6e36e1ed00e 167 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 27 153 1.0E-59 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 AM790 70c490715f6445d1fa546ae5dc9d160a 117 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 8 114 3.3E-16 T 11-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein AM790 70c490715f6445d1fa546ae5dc9d160a 117 Gene3D G3DSA:3.40.1230.10 2 117 1.1E-16 T 11-10-2018 IPR036748 MTH938-like superfamily AM790 70c490715f6445d1fa546ae5dc9d160a 117 SUPERFAMILY SSF64076 3 115 4.19E-23 T 11-10-2018 IPR036748 MTH938-like superfamily AM065 6ae3461cdcf27640a343225f8535a666 131 Pfam PF04956 TrbC/VIRB2 family 8 104 1.5E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM789 b9e843944420a59a49dab1eea6c51f25 267 SUPERFAMILY SSF81345 4 257 2.88E-23 T 11-10-2018 IPR037294 ABC transporter, BtuC-like AM789 b9e843944420a59a49dab1eea6c51f25 267 Pfam PF00950 ABC 3 transport family 8 260 8.4E-50 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 AM1315 92b3f5652bff383e27cfa05eac87a30e 279 Gene3D G3DSA:2.60.40.2500 177 279 7.3E-14 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily AM1315 92b3f5652bff383e27cfa05eac87a30e 279 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 7 278 2.6E-84 T 11-10-2018 IPR014148 P-type conjugative transfer protein VirB9 AM1315 92b3f5652bff383e27cfa05eac87a30e 279 Pfam PF03524 Conjugal transfer protein 37 277 5.9E-54 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX AM1059 3dec0d850c0c8ba1454038d232b6d505 89 Pfam PF04956 TrbC/VIRB2 family 5 72 2.3E-7 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM619 23ce3fbeb57aeaafeb2ddd38c518f418 198 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 72 88 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM619 23ce3fbeb57aeaafeb2ddd38c518f418 198 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 120 130 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM619 23ce3fbeb57aeaafeb2ddd38c518f418 198 Pfam PF01227 GTP cyclohydrolase I 15 193 1.5E-59 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 AM619 23ce3fbeb57aeaafeb2ddd38c518f418 198 SUPERFAMILY SSF55620 3 194 4.08E-56 T 11-10-2018 AM619 23ce3fbeb57aeaafeb2ddd38c518f418 198 Gene3D G3DSA:3.30.1130.10 62 195 6.3E-42 T 11-10-2018 AM619 23ce3fbeb57aeaafeb2ddd38c518f418 198 Gene3D G3DSA:1.10.286.10 2 58 6.7E-9 T 11-10-2018 AM415 2d21122dd09c6fdeada4777fc608a375 440 SUPERFAMILY SSF103473 14 414 5.62E-37 T 11-10-2018 IPR036259 MFS transporter superfamily AM415 2d21122dd09c6fdeada4777fc608a375 440 Gene3D G3DSA:1.20.1250.20 12 417 2.6E-39 T 11-10-2018 AM415 2d21122dd09c6fdeada4777fc608a375 440 Pfam PF00083 Sugar (and other) transporter 15 226 2.3E-17 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 AM092 742311b7f56b3f190b39519670008e40 312 Gene3D G3DSA:1.20.1530.20 154 312 3.6E-6 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily AM987 6f28ab5c453ebc82097e48964133e9e7 151 Pfam PF01617 Surface antigen 88 151 2.1E-7 T 11-10-2018 IPR002566 Surface antigen msp4 AM1219 4dfb9335c74dd0cb880cf1e84dc669f4 153 Pfam PF01617 Surface antigen 32 127 4.5E-10 T 11-10-2018 IPR002566 Surface antigen msp4 AM647 b907afd6af693b6f32264b1d932b54a6 141 Gene3D G3DSA:1.10.8.640 30 105 1.6E-16 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily AM647 b907afd6af693b6f32264b1d932b54a6 141 Pfam PF03918 Cytochrome C biogenesis protein 37 133 1.7E-19 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family AM133 a001277d434aa628b6e906487407198b 637 Pfam PF03429 Major surface protein 1B 1 637 0.0 T 11-10-2018 IPR005091 Major surface protein 1B AM1103 308bca5a1550bf24a74839595ce87bca 434 SUPERFAMILY SSF81442 7 429 3.14E-42 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1103 308bca5a1550bf24a74839595ce87bca 434 Gene3D G3DSA:1.20.210.10 3 433 5.4E-32 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1103 308bca5a1550bf24a74839595ce87bca 434 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 391 1.1E-9 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 AM1116 09a2f725ae09baec89346d09bfc4b8e1 523 Pfam PF02386 Cation transport protein 89 295 5.4E-25 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM1116 09a2f725ae09baec89346d09bfc4b8e1 523 Pfam PF02386 Cation transport protein 329 498 2.0E-14 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AM480 34bde996cc7275049bb588569ca0e660 241 Pfam PF06055 Exopolysaccharide synthesis, ExoD 42 221 4.1E-55 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AM480 34bde996cc7275049bb588569ca0e660 241 PIRSF PIRSF033239 29 236 1.4E-62 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD AM1278 2a6d47a801a39455437f74a90aa7b0ad 102 Gene3D G3DSA:3.30.1310.10 4 100 6.0E-12 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AM1278 2a6d47a801a39455437f74a90aa7b0ad 102 Pfam PF02575 YbaB/EbfC DNA-binding family 13 99 1.4E-13 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family AM1278 2a6d47a801a39455437f74a90aa7b0ad 102 SUPERFAMILY SSF82607 6 99 1.57E-15 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily AM848 f0514c312fefb5f574c4459290d6c22e 189 Pfam PF13244 Domain of unknown function (DUF4040) 16 79 9.7E-14 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 AM486 2b4fa424a64f709451bb334f4bfc056f 94 Pfam PF11020 Domain of unknown function (DUF2610) 4 83 3.5E-41 T 11-10-2018 IPR021277 Protein of unknown function DUF2610 AM1286 db21186c3f6e9acf1d017b4ad19db730 218 SUPERFAMILY SSF52317 1 213 2.2E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM1286 db21186c3f6e9acf1d017b4ad19db730 218 Gene3D G3DSA:3.40.50.880 1 216 1.4E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like AM1287 51a3e5a7e7033269fde31f6d8d963c7c 385 Pfam PF01098 Cell cycle protein 37 374 1.5E-64 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 AM592 0f70ea34a7ab0c388b99bf9ce6fcda02 244 SUPERFAMILY SSF56925 118 234 3.88E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel AM1346 fd7a03e499ad9ec570dc29578032531d 249 Gene3D G3DSA:3.40.50.2020 114 247 5.7E-18 T 11-10-2018 AM1346 fd7a03e499ad9ec570dc29578032531d 249 Pfam PF00156 Phosphoribosyl transferase domain 160 246 7.0E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 AM1346 fd7a03e499ad9ec570dc29578032531d 249 SUPERFAMILY SSF53271 61 247 3.15E-28 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like AM1061 1b01f283e40b9d8bb035e84a66802985 131 Pfam PF04956 TrbC/VIRB2 family 10 102 1.8E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM1053 a0905329e35a21f5fc1133d008462734 809 Gene3D G3DSA:3.40.50.300 603 778 6.2E-7 T 11-10-2018 AM1053 a0905329e35a21f5fc1133d008462734 809 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 219 406 1.4E-19 T 11-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 AM758 740bf5346637893db02a1119cf58c581 449 Pfam PF02646 RmuC family 141 440 2.6E-92 T 11-10-2018 IPR003798 DNA recombination RmuC AM1253 d9a04091bed156e2416585f883444d69 129 Pfam PF04956 TrbC/VIRB2 family 8 104 1.4E-15 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 AM840 fb6156020a4cd6c8d0ad6243c4fe7e99 516 Pfam PF00361 Proton-conducting membrane transporter 91 329 1.6E-10 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 AM733 0c54536012039c90d848f34021397d51 237 Pfam PF03741 Integral membrane protein TerC family 13 199 6.9E-38 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 AM1113 3a6a7b352d07c3f467a9123ff32b4b93 166 Pfam PF02326 Plant ATP synthase F0 5 58 1.2E-4 T 11-10-2018 IPR003319 ATP synthase YMF19-like, N-terminal AM1143 7e2af4291df37d407a53e32cca85a3d0 130 Pfam PF07306 Protein of unknown function (DUF1455) 1 130 1.5E-85 T 11-10-2018 IPR009919 Protein of unknown function DUF1455 AM132 353c1ee54b504cb93e47afddcfc48258 294 Pfam PF01148 Cytidylyltransferase family 137 285 3.3E-51 T 11-10-2018 AM1025 6c7082023f19c4fe61ec66a4f7bdf897 197 Pfam PF10691 Protein of unknown function (DUF2497) 115 194 2.9E-20 T 11-10-2018 IPR019632 Protein of unknown function DUF2497 AM810 b091dbe2d2481209be5ec9e8f8a5fc5a 1687 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 339 536 4.4E-16 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 AM123 c3ee07386b37698c2c4eb5321467a2d9 756 Pfam PF03429 Major surface protein 1B 655 756 1.7E-51 T 11-10-2018 IPR005091 Major surface protein 1B AM123 c3ee07386b37698c2c4eb5321467a2d9 756 Pfam PF03429 Major surface protein 1B 1 658 0.0 T 11-10-2018 IPR005091 Major surface protein 1B