locus-tag	class	description
AOV_00020	PF03477	ATP cone domain
AOV_00035	PF01617	Surface antigen
AOV_00070	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AOV_00070	PF07498	Rho termination factor, N-terminal domain
AOV_00070	PF07497	Rho termination factor, RNA-binding domain
AOV_00080	PF01632	Ribosomal protein L35
AOV_00085	PF00453	Ribosomal protein L20
AOV_00090	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
AOV_00090	PF01409	tRNA synthetases class II core domain (F)
AOV_00100	PF00132	Bacterial transferase hexapeptide (six repeats)
AOV_00100	PF14602	Hexapeptide repeat of succinyl-transferase
AOV_00100	PF12804	MobA-like NTP transferase domain
AOV_00105	PF00886	Ribosomal protein S16
AOV_00110	PF00083	Sugar (and other) transporter
AOV_00110	PF08946	Osmosensory transporter coiled coil
AOV_00120	PF00154	recA bacterial DNA recombination protein
AOV_00125	PF00156	Phosphoribosyl transferase domain
AOV_00130	PF00899	ThiF family
AOV_00135	PF01617	Surface antigen
AOV_00175	PF00085	Thioredoxin
AOV_00185	PF00676	Dehydrogenase E1 component
AOV_00210	PF00571	CBS domain
AOV_00210	PF00478	IMP dehydrogenase / GMP reductase domain
AOV_00215	PF01513	ATP-NAD kinase
AOV_00230	PF00698	Acyl transferase domain
AOV_00235	PF02223	Thymidylate kinase
AOV_00250	PF02556	Preprotein translocase subunit SecB
AOV_00255	PF13462	Thioredoxin
AOV_00260	PF00675	Insulinase (Peptidase family M16)
AOV_00260	PF05193	Peptidase M16 inactive domain
AOV_00265	PF04225	Opacity-associated protein A LysM-like domain
AOV_00265	PF01551	Peptidase family M23
AOV_00275	PF00677	Lumazine binding domain
AOV_00280	PF00271	Helicase conserved C-terminal domain
AOV_00280	PF00270	DEAD/DEAH box helicase
AOV_00280	PF02559	CarD-like/TRCF domain
AOV_00280	PF03461	TRCF domain
AOV_00280	PF17757	UvrB interaction domain
AOV_00285	PF00075	RNase H
AOV_00295	PF00696	Amino acid kinase family
AOV_00300	PF01765	Ribosome recycling factor
AOV_00305	PF01255	Putative undecaprenyl diphosphate synthase
AOV_00320	PF01259	SAICAR synthetase
AOV_00325	PF13393	Histidyl-tRNA synthetase
AOV_00325	PF03129	Anticodon binding domain
AOV_00335	PF02628	Cytochrome oxidase assembly protein
AOV_00340	PF02548	Ketopantoate hydroxymethyltransferase
AOV_00345	PF00005	ABC transporter
AOV_00350	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AOV_00365	PF00313	'Cold-shock' DNA-binding domain
AOV_00370	PF00512	His Kinase A (phospho-acceptor) domain
AOV_00370	PF00672	HAMP domain
AOV_00370	PF00989	PAS fold
AOV_00370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AOV_00380	PF12826	Helix-hairpin-helix motif
AOV_00380	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
AOV_00380	PF03120	NAD-dependent DNA ligase OB-fold domain
AOV_00380	PF00533	BRCA1 C Terminus (BRCT) domain
AOV_00380	PF01653	NAD-dependent DNA ligase adenylation domain
AOV_00385	PF00462	Glutaredoxin
AOV_00400	PF18073	Rubredoxin metal binding domain
AOV_00415	PF01250	Ribosomal protein S6
AOV_00420	PF01084	Ribosomal protein S18
AOV_00425	PF01281	Ribosomal protein L9, N-terminal domain
AOV_00425	PF03948	Ribosomal protein L9, C-terminal domain
AOV_00430	PF00464	Serine hydroxymethyltransferase
AOV_00445	PF02910	Fumarate reductase flavoprotein C-term
AOV_00445	PF00890	FAD binding domain
AOV_00450	PF13085	2Fe-2S iron-sulfur cluster binding domain
AOV_00455	PF02511	Thymidylate synthase complementing protein
AOV_00460	PF07690	Major Facilitator Superfamily
AOV_00465	PF05496	Holliday junction DNA helicase RuvB P-loop domain
AOV_00465	PF05491	RuvB C-terminal winged helix domain
AOV_00465	PF17864	RuvB AAA lid domain
AOV_00470	PF01330	RuvA N terminal domain
AOV_00470	PF07499	RuvA, C-terminal domain
AOV_00475	PF01578	Cytochrome C assembly protein
AOV_00480	PF00625	Guanylate kinase
AOV_00490	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
AOV_00490	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
AOV_00525	PF00034	Cytochrome c
AOV_00535	PF00391	PEP-utilising enzyme, mobile domain
AOV_00535	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
AOV_00535	PF02896	PEP-utilising enzyme, TIM barrel domain
AOV_00545	PF13419	Haloacid dehalogenase-like hydrolase
AOV_00550	PF01336	OB-fold nucleic acid binding domain
AOV_00550	PF02938	GAD domain
AOV_00550	PF00152	tRNA synthetases class II (D, K and N) 
AOV_00560	PF04972	BON domain
AOV_00565	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
AOV_00565	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
AOV_00570	PF07478	D-ala D-ala ligase C-terminus
AOV_00570	PF01820	D-ala D-ala ligase N-terminus
AOV_00580	PF00072	Response regulator receiver domain
AOV_00580	PF00158	Sigma-54 interaction domain
AOV_00580	PF02954	Bacterial regulatory protein, Fis family
AOV_00610	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AOV_00610	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AOV_00635	PF00753	Metallo-beta-lactamase superfamily
AOV_00645	PF00528	Binding-protein-dependent transport system inner membrane component
AOV_00650	PF01411	tRNA synthetases class II (A)
AOV_00650	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AOV_00660	PF02629	CoA binding domain
AOV_00660	PF00549	CoA-ligase
AOV_00665	PF00549	CoA-ligase
AOV_00665	PF08442	ATP-grasp domain
AOV_00670	PF01165	Ribosomal protein S21
AOV_00685	PF03060	Nitronate monooxygenase
AOV_00695	PF00528	Binding-protein-dependent transport system inner membrane component
AOV_00700	PF00529	HlyD membrane-fusion protein of T1SS
AOV_00700	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
AOV_00710	PF08245	Mur ligase middle domain
AOV_00715	PF07676	WD40-like Beta Propeller Repeat
AOV_00715	PF04052	TolB amino-terminal domain
AOV_00720	PF12706	Beta-lactamase superfamily domain
AOV_00720	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
AOV_00720	PF17770	Ribonuclease J C-terminal domain
AOV_00735	PF00164	Ribosomal protein S12/S23
AOV_00740	PF00177	Ribosomal protein S7p/S5e
AOV_00745	PF14492	Elongation Factor G, domain II
AOV_00745	PF03764	Elongation factor G, domain IV
AOV_00745	PF00679	Elongation factor G C-terminus
AOV_00745	PF03144	Elongation factor Tu domain 2
AOV_00745	PF00009	Elongation factor Tu GTP binding domain
AOV_00750	PF00009	Elongation factor Tu GTP binding domain
AOV_00750	PF03143	Elongation factor Tu C-terminal domain
AOV_00750	PF03144	Elongation factor Tu domain 2
AOV_00765	PF00467	KOW motif
AOV_00765	PF02357	Transcription termination factor nusG
AOV_00770	PF00298	Ribosomal protein L11, RNA binding domain
AOV_00770	PF03946	Ribosomal protein L11, N-terminal domain
AOV_00775	PF00687	Ribosomal protein L1p/L10e family
AOV_00780	PF00466	Ribosomal protein L10
AOV_00785	PF00542	Ribosomal protein L7/L12 C-terminal domain
AOV_00790	PF04561	RNA polymerase Rpb2, domain 2
AOV_00790	PF00562	RNA polymerase Rpb2, domain 6
AOV_00790	PF10385	RNA polymerase beta subunit external 1 domain
AOV_00790	PF04565	RNA polymerase Rpb2, domain 3
AOV_00790	PF04563	RNA polymerase beta subunit
AOV_00790	PF04560	RNA polymerase Rpb2, domain 7
AOV_00795	PF04998	RNA polymerase Rpb1, domain 5
AOV_00795	PF05000	RNA polymerase Rpb1, domain 4
AOV_00795	PF04983	RNA polymerase Rpb1, domain 3
AOV_00795	PF04997	RNA polymerase Rpb1, domain 1
AOV_00795	PF00623	RNA polymerase Rpb1, domain 2
AOV_00800	PF01351	Ribonuclease HII
AOV_00820	PF00155	Aminotransferase class I and II
AOV_00830	PF03309	Type III pantothenate kinase
AOV_00835	PF01180	Dihydroorotate dehydrogenase
AOV_00840	PF01327	Polypeptide deformylase
AOV_00845	PF02230	Phospholipase/Carboxylesterase
AOV_00855	PF01243	Pyridoxamine 5'-phosphate oxidase
AOV_00855	PF10590	Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
AOV_00860	PF08245	Mur ligase middle domain
AOV_00860	PF02875	Mur ligase family, glutamate ligase domain
AOV_00865	PF01053	Cys/Met metabolism PLP-dependent enzyme
AOV_00880	PF02811	PHP domain
AOV_00880	PF14579	Helix-hairpin-helix motif
AOV_00880	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
AOV_00880	PF07733	Bacterial DNA polymerase III alpha NTPase domain
AOV_00890	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
AOV_00900	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AOV_00905	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
AOV_00915	PF08543	Phosphomethylpyrimidine kinase
AOV_00915	PF02581	Thiamine monophosphate synthase
AOV_00925	PF01594	AI-2E family transporter
AOV_00935	PF01479	S4 domain
AOV_00935	PF00163	Ribosomal protein S4/S9 N-terminal domain
AOV_00975	PF05698	Bacterial trigger factor protein (TF) C-terminus
AOV_00975	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
AOV_00975	PF05697	Bacterial trigger factor protein (TF)
AOV_00980	PF00574	Clp protease
AOV_00985	PF10431	C-terminal, D2-small domain, of ClpB protein 
AOV_00985	PF07724	AAA domain (Cdc48 subfamily)
AOV_00985	PF06689	ClpX C4-type zinc finger
AOV_00990	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
AOV_00990	PF05362	Lon protease (S16) C-terminal proteolytic domain
AOV_00990	PF00004	ATPase family associated with various cellular activities (AAA)
AOV_01000	PF02911	Formyl transferase, C-terminal domain
AOV_01000	PF00551	Formyl transferase
AOV_01010	PF03618	Kinase/pyrophosphorylase
AOV_01015	PF02581	Thiamine monophosphate synthase
AOV_01030	PF03471	Transporter associated domain
AOV_01030	PF00571	CBS domain
AOV_01030	PF01595	Cyclin M transmembrane N-terminal domain
AOV_01040	PF01580	FtsK/SpoIIIE family
AOV_01040	PF09397	Ftsk gamma domain
AOV_01040	PF17854	FtsK alpha domain
AOV_01040	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
AOV_01060	PF00202	Aminotransferase class-III
AOV_01065	PF00512	His Kinase A (phospho-acceptor) domain
AOV_01065	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AOV_01065	PF00989	PAS fold
AOV_01075	PF02472	Biopolymer transport protein ExbD/TolR
AOV_01080	PF01618	MotA/TolQ/ExbB proton channel family
AOV_01090	PF17782	DprA winged helix domain
AOV_01090	PF02481	DNA recombination-mediator protein A
AOV_01105	PF02801	Beta-ketoacyl synthase, C-terminal domain
AOV_01105	PF00109	Beta-ketoacyl synthase, N-terminal domain
AOV_01110	PF00550	Phosphopantetheine attachment site
AOV_01115	PF00471	Ribosomal protein L33
AOV_01125	PF02600	Disulfide bond formation protein DsbB
AOV_01190	PF13361	UvrD-like helicase C-terminal domain
AOV_01190	PF00580	UvrD/REP helicase N-terminal domain
AOV_01205	PF03989	DNA gyrase C-terminal domain, beta-propeller
AOV_01205	PF00521	DNA gyrase/topoisomerase IV, subunit A
AOV_01210	PF00633	Helix-hairpin-helix motif
AOV_01210	PF10576	Iron-sulfur binding domain of endonuclease III
AOV_01210	PF00730	HhH-GPD superfamily base excision DNA repair protein
AOV_01220	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AOV_01220	PF00183	Hsp90 protein
AOV_01230	PF10397	Adenylosuccinate lyase C-terminus
AOV_01230	PF00206	Lyase
AOV_01245	PF02151	UvrB/uvrC motif
AOV_01245	PF08459	UvrC Helix-hairpin-helix N-terminal
AOV_01245	PF01541	GIY-YIG catalytic domain
AOV_01265	PF03099	Biotin/lipoate A/B protein ligase family
AOV_01265	PF02237	Biotin protein ligase C terminal domain
AOV_01280	PF08402	TOBE domain
AOV_01280	PF00005	ABC transporter
AOV_01285	PF02416	mttA/Hcf106 family
AOV_01290	PF02132	RecR protein
AOV_01290	PF13662	Toprim domain
AOV_01295	PF01297	Zinc-uptake complex component A periplasmic
AOV_01300	PF00005	ABC transporter
AOV_01305	PF03109	ABC1 family
AOV_01315	PF04055	Radical SAM superfamily
AOV_01315	PF00919	Uncharacterized protein family UPF0004
AOV_01330	PF02779	Transketolase, pyrimidine binding domain
AOV_01330	PF16078	2-oxoglutarate dehydrogenase N-terminus
AOV_01330	PF00676	Dehydrogenase E1 component
AOV_01330	PF16870	2-oxoglutarate dehydrogenase C-terminal
AOV_01345	PF00701	Dihydrodipicolinate synthetase family
AOV_01355	PF01230	HIT domain
AOV_01365	PF00488	MutS domain V
AOV_01365	PF01624	MutS domain I
AOV_01365	PF05192	MutS domain III
AOV_01365	PF05188	MutS domain II
AOV_01365	PF05190	MutS family domain IV
AOV_01370	PF00795	Carbon-nitrogen hydrolase
AOV_01370	PF02540	NAD synthase
AOV_01375	PF00490	Delta-aminolevulinic acid dehydratase
AOV_01380	PF03717	Penicillin-binding Protein dimerisation domain
AOV_01380	PF00905	Penicillin binding protein transpeptidase domain
AOV_01390	PF00083	Sugar (and other) transporter
AOV_01395	PF07690	Major Facilitator Superfamily
AOV_01400	PF07690	Major Facilitator Superfamily
AOV_01405	PF07690	Major Facilitator Superfamily
AOV_01415	PF00436	Single-strand binding protein family
AOV_01425	PF02934	GatB/GatE catalytic domain
AOV_01425	PF02637	GatB domain
AOV_01440	PF00308	Bacterial dnaA  protein
AOV_01440	PF08299	Bacterial dnaA protein helix-turn-helix
AOV_01440	PF11638	DnaA N-terminal domain
AOV_01450	PF01467	Cytidylyltransferase-like
AOV_01455	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
AOV_01465	PF09115	DNA polymerase III, delta subunit, C terminal
AOV_01470	PF01300	Telomere recombination
AOV_01470	PF03481	Putative GTP-binding controlling metal-binding
AOV_01475	PF01121	Dephospho-CoA kinase
AOV_01480	PF13667	ThiC-associated domain 
AOV_01480	PF01964	Radical SAM ThiC family
AOV_01490	PF01192	RNA polymerase Rpb6 
AOV_01500	PF13603	Leucyl-tRNA synthetase, Domain 2
AOV_01500	PF09334	tRNA synthetases class I (M)
AOV_01500	PF00133	tRNA synthetases class I (I, L, M and V)
AOV_01500	PF08264	Anticodon-binding domain of tRNA
AOV_01505	PF08264	Anticodon-binding domain of tRNA
AOV_01505	PF13603	Leucyl-tRNA synthetase, Domain 2
AOV_01505	PF09334	tRNA synthetases class I (M)
AOV_01505	PF00133	tRNA synthetases class I (I, L, M and V)
AOV_01510	PF01026	TatD related DNase
AOV_01515	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
AOV_01520	PF03100	CcmE
AOV_01525	PF01975	Survival protein SurE
AOV_01530	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
AOV_01535	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
AOV_01540	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
AOV_01545	PF17755	UvrA DNA-binding domain
AOV_01545	PF17760	UvrA interaction domain
AOV_01555	PF00885	6,7-dimethyl-8-ribityllumazine synthase
AOV_01560	PF02096	60Kd inner membrane protein
AOV_01560	PF14849	YidC periplasmic domain
AOV_01565	PF01066	CDP-alcohol phosphatidyltransferase
AOV_01570	PF02666	Phosphatidylserine decarboxylase
AOV_01575	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AOV_01585	PF03033	Glycosyltransferase family 28 N-terminal domain
AOV_01585	PF04101	Glycosyltransferase family 28 C-terminal domain
AOV_01590	PF09285	Elongation factor P, C-terminal
AOV_01590	PF08207	Elongation factor P (EF-P) KOW-like domain
AOV_01590	PF01132	Elongation factor P (EF-P) OB domain
AOV_01600	PF01479	S4 domain
AOV_01600	PF00849	RNA pseudouridylate synthase
AOV_01605	PF00990	Diguanylate cyclase, GGDEF domain
AOV_01605	PF00072	Response regulator receiver domain
AOV_01615	PF05088	Bacterial NAD-glutamate dehydrogenase
AOV_01620	PF06055	Exopolysaccharide synthesis, ExoD
AOV_01625	PF01406	tRNA synthetases class I (C) catalytic domain
AOV_01625	PF09190	DALR domain
AOV_01630	PF00268	Ribonucleotide reductase, small chain
AOV_01650	PF08275	DNA primase catalytic core, N-terminal domain
AOV_01650	PF01807	CHC2 zinc finger
AOV_01650	PF13662	Toprim domain
AOV_01655	PF04545	Sigma-70, region 4
AOV_01655	PF00140	Sigma-70 factor, region 1.2
AOV_01655	PF04546	Sigma-70, non-essential region
AOV_01655	PF03979	Sigma-70 factor, region 1.1
AOV_01655	PF04539	Sigma-70 region 3
AOV_01655	PF04542	Sigma-70 region 2 
AOV_01660	PF01207	Dihydrouridine synthase (Dus)
AOV_01665	PF00288	GHMP kinases N terminal domain
AOV_01665	PF08544	GHMP kinases C terminal 
AOV_01680	PF00512	His Kinase A (phospho-acceptor) domain
AOV_01680	PF13188	PAS domain
AOV_01680	PF08448	PAS fold
AOV_01680	PF00072	Response regulator receiver domain
AOV_01680	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AOV_01700	PF01256	Carbohydrate kinase
AOV_01700	PF03853	YjeF-related protein N-terminus
AOV_01705	PF01396	Topoisomerase DNA binding C4 zinc finger
AOV_01705	PF13368	Topoisomerase C-terminal repeat
AOV_01705	PF01751	Toprim domain
AOV_01705	PF01131	DNA topoisomerase
AOV_01725	PF01648	4'-phosphopantetheinyl transferase superfamily
AOV_01730	PF03129	Anticodon binding domain
AOV_01730	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AOV_01745	PF01467	Cytidylyltransferase-like
AOV_01750	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AOV_01755	PF00578	AhpC/TSA family
AOV_01755	PF10417	C-terminal domain of 1-Cys peroxiredoxin
AOV_01765	PF13145	PPIC-type PPIASE domain
AOV_01800	PF01509	TruB family pseudouridylate synthase (N terminal domain)
AOV_01800	PF16198	tRNA pseudouridylate synthase B C-terminal domain
AOV_01805	PF00312	Ribosomal protein S15
AOV_01810	PF00013	KH domain
AOV_01810	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
AOV_01810	PF01138	3' exoribonuclease family, domain 1
AOV_01810	PF03725	3' exoribonuclease family, domain 2
AOV_01810	PF00575	S1 RNA binding domain
AOV_01825	PF00009	Elongation factor Tu GTP binding domain
AOV_01825	PF03144	Elongation factor Tu domain 2
AOV_01825	PF06421	GTP-binding protein LepA C-terminus
AOV_01825	PF00679	Elongation factor G C-terminus
AOV_01905	PF00586	AIR synthase related protein, N-terminal domain
AOV_01905	PF02769	AIR synthase related protein, C-terminal domain
AOV_01915	PF00202	Aminotransferase class-III
AOV_01930	PF00398	Ribosomal RNA adenine dimethylase
AOV_01940	PF00121	Triosephosphate isomerase
AOV_01945	PF16868	NMT1-like family
AOV_01950	PF00814	Glycoprotease family
AOV_01955	PF06271	RDD family
AOV_01965	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
AOV_01965	PF00056	lactate/malate dehydrogenase, NAD binding domain
AOV_01985	PF02502	Ribose/Galactose Isomerase
AOV_01990	PF08241	Methyltransferase domain
AOV_01995	PF00814	Glycoprotease family
AOV_02000	PF16868	NMT1-like family
AOV_02040	PF14850	DNA-binding domain of Proline dehydrogenase
AOV_02040	PF00171	Aldehyde dehydrogenase family
AOV_02040	PF01619	Proline dehydrogenase
AOV_02040	PF18327	Proline utilization A proline dehydrogenase N-terminal domain 
AOV_02060	PF03330	Lytic transglycolase
AOV_02065	PF03372	Endonuclease/Exonuclease/phosphatase family
AOV_02075	PF00444	Ribosomal protein L36
AOV_02095	PF01016	Ribosomal L27 protein
AOV_02100	PF00829	Ribosomal prokaryotic L21 protein
AOV_02110	PF03952	Enolase, N-terminal domain
AOV_02110	PF00113	Enolase, C-terminal TIM barrel domain
AOV_02115	PF01926	50S ribosome-binding GTPase
AOV_02115	PF01018	GTP1/OBG
AOV_02125	PF01795	MraW methylase family
AOV_02135	PF01795	MraW methylase family
AOV_02140	PF01812	5-formyltetrahydrofolate cyclo-ligase family
AOV_02205	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AOV_02210	PF01523	Putative modulator of DNA gyrase
AOV_02215	PF01227	GTP cyclohydrolase I
AOV_02220	PF00231	ATP synthase
AOV_02225	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
AOV_02235	PF00929	Exonuclease
AOV_02240	PF01078	Magnesium chelatase, subunit ChlI
AOV_02240	PF13335	Magnesium chelatase, subunit ChlI C-terminal
AOV_02260	PF00140	Sigma-70 factor, region 1.2
AOV_02260	PF04542	Sigma-70 region 2 
AOV_02260	PF04545	Sigma-70, region 4
AOV_02275	PF00146	NADH dehydrogenase
AOV_02280	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
AOV_02280	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
AOV_02280	PF00384	Molybdopterin oxidoreductase
AOV_02290	PF00204	DNA gyrase B
AOV_02290	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
AOV_02290	PF00986	DNA gyrase B subunit, carboxyl terminus
AOV_02290	PF01751	Toprim domain
AOV_02295	PF02441	Flavoprotein
AOV_02300	PF03918	Cytochrome C biogenesis protein
AOV_02310	PF00111	2Fe-2S iron-sulfur cluster binding domain
AOV_02315	PF00012	Hsp70 protein
AOV_02320	PF07743	HSCB C-terminal oligomerisation domain
AOV_02320	PF00226	DnaJ domain
AOV_02325	PF01521	Iron-sulphur cluster biosynthesis
AOV_02330	PF01592	NifU-like N terminal domain
AOV_02335	PF00266	Aminotransferase class-V
AOV_02340	PF00266	Aminotransferase class-V
AOV_02345	PF02129	X-Pro dipeptidyl-peptidase (S15 family)
AOV_02350	PF01921	tRNA synthetases class I (K)
AOV_02360	PF01416	tRNA pseudouridine synthase
AOV_02365	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AOV_02365	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AOV_02370	PF00923	Transaldolase/Fructose-6-phosphate aldolase
AOV_02375	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
AOV_02380	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AOV_02380	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AOV_02405	PF01728	FtsJ-like methyltransferase
AOV_02435	PF00551	Formyl transferase
AOV_02455	PF03485	Arginyl tRNA synthetase N terminal domain
AOV_02455	PF05746	DALR anticodon binding domain
AOV_02455	PF00750	tRNA synthetases class I (R)
AOV_02460	PF11967	Recombination protein O N terminal
AOV_02460	PF02565	Recombination protein O C terminal
AOV_02475	PF00133	tRNA synthetases class I (I, L, M and V)
AOV_02475	PF08264	Anticodon-binding domain of tRNA
AOV_02480	PF00578	AhpC/TSA family
AOV_02485	PF04452	RNA methyltransferase
AOV_02495	PF00472	RF-1 domain
AOV_02495	PF03462	PCRF domain
AOV_02500	PF01709	Transcriptional regulator
AOV_02505	PF01425	Amidase
AOV_02510	PF08245	Mur ligase middle domain
AOV_02510	PF02875	Mur ligase family, glutamate ligase domain
AOV_02515	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
AOV_02515	PF03900	Porphobilinogen deaminase, C-terminal domain
AOV_02520	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
AOV_02520	PF01565	FAD binding domain 
AOV_02545	PF12838	4Fe-4S dicluster domain
AOV_02550	PF10502	Signal peptidase, peptidase S26 
AOV_02555	PF01521	Iron-sulphur cluster biosynthesis
AOV_02575	PF02861	Clp amino terminal domain, pathogenicity island component
AOV_02575	PF10431	C-terminal, D2-small domain, of ClpB protein 
AOV_02575	PF07724	AAA domain (Cdc48 subfamily)
AOV_02575	PF00004	ATPase family associated with various cellular activities (AAA)
AOV_02575	PF17871	AAA lid domain
AOV_02580	PF03741	Integral membrane protein TerC family
AOV_02585	PF02033	Ribosome-binding factor A
AOV_02590	PF11987	Translation-initiation factor 2
AOV_02590	PF00009	Elongation factor Tu GTP binding domain
AOV_02595	PF00575	S1 RNA binding domain
AOV_02595	PF13184	NusA-like KH domain
AOV_02595	PF08529	NusA N-terminal domain
AOV_02600	PF00873	AcrB/AcrD/AcrF family
AOV_02605	PF00902	Sec-independent protein translocase protein (TatC)
AOV_02610	PF04551	GcpE protein
AOV_02620	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
AOV_02620	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
AOV_02620	PF13288	DXP reductoisomerase C-terminal domain
AOV_02625	PF00361	Proton-conducting membrane transporter
AOV_02630	PF00361	Proton-conducting membrane transporter
AOV_02635	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
AOV_02635	PF00361	Proton-conducting membrane transporter
AOV_02640	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
AOV_02645	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
AOV_02650	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
AOV_02650	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
AOV_02650	PF10531	SLBB domain
AOV_02680	PF02646	RmuC family
AOV_02685	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AOV_02685	PF02403	Seryl-tRNA synthetase N-terminal domain
AOV_02695	PF01218	Coproporphyrinogen III oxidase
AOV_02700	PF00696	Amino acid kinase family
AOV_02705	PF01926	50S ribosome-binding GTPase
AOV_02710	PF00472	RF-1 domain
AOV_02710	PF03462	PCRF domain
AOV_02715	PF01039	Carboxyl transferase domain
AOV_02720	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
AOV_02720	PF06827	Zinc finger found in FPG and IleRS
AOV_02720	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
AOV_02765	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AOV_02785	PF02167	Cytochrome C1 family
AOV_02790	PF00033	Cytochrome b/b6/petB
AOV_02790	PF00032	Cytochrome b(C-terminal)/b6/petD
AOV_02795	PF00355	Rieske [2Fe-2S] domain
AOV_02795	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
AOV_02805	PF00950	ABC 3 transport family
AOV_02815	PF00889	Elongation factor TS
AOV_02820	PF00318	Ribosomal protein S2
AOV_02825	PF02545	Maf-like protein
AOV_02830	PF01176	Translation initiation factor 1A / IF-1
AOV_02845	PF07992	Pyridine nucleotide-disulphide oxidoreductase
AOV_02845	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
AOV_02850	PF13360	PQQ-like domain
AOV_02855	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
AOV_02855	PF01926	50S ribosome-binding GTPase
AOV_02860	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
AOV_02860	PF01676	Metalloenzyme superfamily
AOV_02870	PF00117	Glutamine amidotransferase class-I
AOV_02870	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
AOV_02880	PF00692	dUTPase
AOV_02885	PF01225	Mur ligase family, catalytic domain
AOV_02885	PF02875	Mur ligase family, glutamate ligase domain
AOV_02885	PF08245	Mur ligase middle domain
AOV_02900	PF04610	TrbL/VirB6 plasmid conjugal transfer protein
AOV_02905	PF04610	TrbL/VirB6 plasmid conjugal transfer protein
AOV_02915	PF03135	CagE, TrbE, VirB family, component of type IV transporter system
AOV_02925	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
AOV_02925	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
AOV_02930	PF00528	Binding-protein-dependent transport system inner membrane component
AOV_02940	PF04055	Radical SAM superfamily
AOV_02960	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AOV_02960	PF00289	Biotin carboxylase, N-terminal domain
AOV_02960	PF02785	Biotin carboxylase C-terminal domain
AOV_02965	PF00849	RNA pseudouridylate synthase
AOV_02970	PF00830	Ribosomal L28 family
AOV_02975	PF00270	DEAD/DEAH box helicase
AOV_02975	PF17764	3′ DNA-binding domain (3′BD)
AOV_02975	PF18074	Primosomal protein N C-terminal domain
AOV_02975	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
AOV_02975	PF00271	Helicase conserved C-terminal domain
AOV_03005	PF01926	50S ribosome-binding GTPase
AOV_03005	PF07650	KH domain
AOV_03010	PF02881	SRP54-type protein, helical bundle domain
AOV_03010	PF02978	Signal peptide binding domain
AOV_03010	PF00448	SRP54-type protein, GTPase domain
AOV_03030	PF00012	Hsp70 protein
AOV_03035	PF12111	Polyribonucleotide phosphorylase C terminal
AOV_03035	PF10150	Ribonuclease E/G family
AOV_03035	PF00575	S1 RNA binding domain
AOV_03045	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
AOV_03065	PF02780	Transketolase, C-terminal domain
AOV_03065	PF00456	Transketolase, thiamine diphosphate binding domain
AOV_03065	PF02779	Transketolase, pyrimidine binding domain
AOV_03075	PF00691	OmpA family
AOV_03080	PF00709	Adenylosuccinate synthetase
AOV_03090	PF03652	Holliday junction resolvase
AOV_03095	PF00317	Ribonucleotide reductase, all-alpha domain
AOV_03095	PF02867	Ribonucleotide reductase, barrel domain
AOV_03095	PF03477	ATP cone domain
AOV_03105	PF00348	Polyprenyl synthetase
AOV_03115	PF01266	FAD dependent oxidoreductase
AOV_03120	PF00772	DnaB-like helicase N terminal domain
AOV_03120	PF03796	DnaB-like helicase C terminal domain
AOV_03130	PF14437	MafB19-like deaminase
AOV_03135	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
AOV_03135	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
AOV_03140	PF02504	Fatty acid synthesis protein
AOV_03145	PF01783	Ribosomal L32p protein family
AOV_03150	PF01702	Queuine tRNA-ribosyltransferase
AOV_03155	PF00005	ABC transporter
AOV_03160	PF01113	Dihydrodipicolinate reductase, N-terminus
AOV_03160	PF05173	Dihydrodipicolinate reductase, C-terminus
AOV_03165	PF01613	Flavin reductase like domain
AOV_03170	PF01040	UbiA prenyltransferase family
AOV_03185	PF00468	Ribosomal protein L34
AOV_03190	PF00825	Ribonuclease P
AOV_03205	PF03483	B3/4 domain
AOV_03205	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
AOV_03205	PF01588	Putative tRNA binding domain
AOV_03205	PF03147	Ferredoxin-fold anticodon binding domain
AOV_03205	PF03484	tRNA synthetase B5 domain
AOV_03210	PF01196	Ribosomal protein L17
AOV_03215	PF01000	RNA polymerase Rpb3/RpoA insert domain
AOV_03215	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
AOV_03215	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
AOV_03220	PF00411	Ribosomal protein S11
AOV_03225	PF00416	Ribosomal protein S13/S18
AOV_03230	PF05191	Adenylate kinase, active site lid
AOV_03235	PF00344	SecY translocase
AOV_03240	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
AOV_03245	PF00333	Ribosomal protein S5, N-terminal domain
AOV_03245	PF03719	Ribosomal protein S5, C-terminal domain
AOV_03250	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
AOV_03255	PF00347	Ribosomal protein L6
AOV_03260	PF00410	Ribosomal protein S8
AOV_03265	PF00253	Ribosomal protein S14p/S29e
AOV_03270	PF00281	Ribosomal protein L5
AOV_03270	PF00673	ribosomal L5P family C-terminus
AOV_03275	PF00467	KOW motif
AOV_03275	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
AOV_03280	PF00238	Ribosomal protein L14p/L23e
AOV_03285	PF00366	Ribosomal protein S17
AOV_03290	PF00831	Ribosomal L29 protein
AOV_03295	PF00252	Ribosomal protein L16p/L10e
AOV_03300	PF07650	KH domain
AOV_03300	PF00189	Ribosomal protein S3, C-terminal domain
AOV_03305	PF00237	Ribosomal protein L22p/L17e
AOV_03310	PF00203	Ribosomal protein S19
AOV_03315	PF00181	Ribosomal Proteins L2, RNA binding domain
AOV_03315	PF03947	Ribosomal Proteins L2, C-terminal domain
AOV_03320	PF00276	Ribosomal protein L23
AOV_03325	PF00573	Ribosomal protein L4/L1 family
AOV_03330	PF00297	Ribosomal protein L3
AOV_03335	PF00338	Ribosomal protein S10p/S20e
AOV_03340	PF03143	Elongation factor Tu C-terminal domain
AOV_03340	PF03144	Elongation factor Tu domain 2
AOV_03340	PF00009	Elongation factor Tu GTP binding domain
AOV_03355	PF08032	RNA 2'-O ribose methyltransferase substrate binding
AOV_03355	PF00588	SpoU rRNA Methylase family
AOV_03360	PF02224	Cytidylate kinase
AOV_03365	PF00575	S1 RNA binding domain
AOV_03370	PF01343	Peptidase family S49
AOV_03375	PF00216	Bacterial DNA-binding protein
AOV_03395	PF00762	Ferrochelatase
AOV_03400	PF03969	AFG1-like ATPase
AOV_03430	PF00580	UvrD/REP helicase N-terminal domain
AOV_03430	PF13361	UvrD-like helicase C-terminal domain
AOV_03430	PF12705	PD-(D/E)XK nuclease superfamily
AOV_03440	PF00664	ABC transporter transmembrane region
AOV_03440	PF00005	ABC transporter
AOV_03445	PF00809	Pterin binding enzyme
AOV_03450	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AOV_03450	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
AOV_03450	PF02142	MGS-like domain
AOV_03460	PF00206	Lyase
AOV_03460	PF10415	Fumarase C C-terminus
AOV_03465	PF02441	Flavoprotein
AOV_03465	PF04127	DNA / pantothenate metabolism flavoprotein
AOV_03470	PF01979	Amidohydrolase family
AOV_03475	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
AOV_03475	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
AOV_03475	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
AOV_03475	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
AOV_03480	PF03099	Biotin/lipoate A/B protein ligase family
AOV_03485	PF04002	RadC-like JAB domain
AOV_03490	PF00166	Chaperonin 10 Kd subunit
AOV_03495	PF00118	TCP-1/cpn60 chaperonin family
AOV_03505	PF00004	ATPase family associated with various cellular activities (AAA)
AOV_03505	PF07724	AAA domain (Cdc48 subfamily)
AOV_03505	PF17871	AAA lid domain
AOV_03505	PF02861	Clp amino terminal domain, pathogenicity island component
AOV_03505	PF10431	C-terminal, D2-small domain, of ClpB protein 
AOV_03520	PF00775	Dioxygenase
AOV_03525	PF02789	Cytosol aminopeptidase family, N-terminal domain
AOV_03525	PF00883	Cytosol aminopeptidase family, catalytic domain
AOV_03530	PF00551	Formyl transferase
AOV_03560	PF13932	GidA associated domain
AOV_03560	PF01134	Glucose inhibited division protein A
AOV_03565	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
AOV_03570	PF01476	LysM domain
AOV_03570	PF01551	Peptidase family M23
AOV_03585	PF04055	Radical SAM superfamily
AOV_03585	PF06968	Biotin and Thiamin Synthesis associated domain
AOV_03595	PF00586	AIR synthase related protein, N-terminal domain
AOV_03595	PF02769	AIR synthase related protein, C-terminal domain
AOV_03595	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
AOV_03600	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AOV_03600	PF00809	Pterin binding enzyme
AOV_03630	PF00586	AIR synthase related protein, N-terminal domain
AOV_03630	PF02769	AIR synthase related protein, C-terminal domain
AOV_03635	PF02899	Phage integrase, N-terminal SAM-like domain
AOV_03635	PF00589	Phage integrase family
AOV_03640	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AOV_03640	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
AOV_03665	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AOV_03665	PF07498	Rho termination factor, N-terminal domain
AOV_03665	PF07497	Rho termination factor, RNA-binding domain
AOV_03675	PF00227	Proteasome subunit
AOV_03680	PF00004	ATPase family associated with various cellular activities (AAA)
AOV_03680	PF07724	AAA domain (Cdc48 subfamily)
AOV_03680	PF10431	C-terminal, D2-small domain, of ClpB protein 
AOV_03685	PF01209	ubiE/COQ5 methyltransferase family
AOV_03690	PF08264	Anticodon-binding domain of tRNA
AOV_03690	PF09334	tRNA synthetases class I (M)
AOV_03695	PF13840	ACT domain 
AOV_03695	PF01842	ACT domain
AOV_03695	PF00696	Amino acid kinase family
AOV_03700	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
AOV_03700	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
AOV_03705	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AOV_03710	PF01040	UbiA prenyltransferase family
AOV_03715	PF13525	Outer membrane lipoprotein
AOV_03720	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
AOV_03720	PF02844	Phosphoribosylglycinamide synthetase, N domain
AOV_03720	PF02843	Phosphoribosylglycinamide synthetase, C domain
AOV_03725	PF02699	Preprotein translocase subunit
AOV_03730	PF01380	SIS domain
AOV_03735	PF02768	DNA polymerase III beta subunit, C-terminal domain
AOV_03735	PF02767	DNA polymerase III beta subunit, central domain
AOV_03735	PF00712	DNA polymerase III beta subunit, N-terminal domain
AOV_03745	PF00072	Response regulator receiver domain
AOV_03745	PF00486	Transcriptional regulatory protein, C terminal
AOV_03765	PF00719	Inorganic pyrophosphatase
AOV_03775	PF00380	Ribosomal protein S9/S16
AOV_03780	PF00572	Ribosomal protein L13
AOV_03785	PF02321	Outer membrane efflux protein
AOV_03795	PF10609	NUBPL iron-transfer P-loop NTPase
AOV_03800	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
AOV_03800	PF14572	Phosphoribosyl synthetase-associated domain
AOV_03805	PF02686	Glu-tRNAGln amidotransferase C subunit
AOV_03810	PF00694	Aconitase C-terminal domain
AOV_03810	PF00330	Aconitase family (aconitate hydratase)
AOV_03815	PF04379	ApaG domain 
AOV_03820	PF02222	ATP-grasp domain
AOV_03820	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
AOV_03955	PF05690	Thiazole biosynthesis protein ThiG
AOV_03965	PF00749	tRNA synthetases class I (E and Q), catalytic domain
AOV_03975	PF13145	PPIC-type PPIASE domain
AOV_03990	PF01145	SPFH domain / Band 7 family
AOV_03990	PF12221	Bacterial membrane protein N terminal
AOV_03995	PF01145	SPFH domain / Band 7 family
AOV_04000	PF13180	PDZ domain
AOV_04010	PF14622	Ribonuclease-III-like
AOV_04010	PF00035	Double-stranded RNA binding motif
AOV_04015	PF04442	Cytochrome c oxidase assembly protein CtaG/Cox11
AOV_04040	PF00675	Insulinase (Peptidase family M16)
AOV_04040	PF05193	Peptidase M16 inactive domain
AOV_04045	PF01252	Signal peptidase (SPase) II
AOV_04050	PF06574	FAD synthetase
AOV_04050	PF01687	Riboflavin kinase
AOV_04055	PF00462	Glutaredoxin
AOV_04060	PF05175	Methyltransferase small domain
AOV_04060	PF17827	PrmC N-terminal domain
AOV_04065	PF00557	Metallopeptidase family M24
AOV_04070	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AOV_04070	PF00364	Biotin-requiring enzyme
AOV_04070	PF02817	e3 binding domain
AOV_04080	PF02569	Pantoate-beta-alanine ligase
AOV_04085	PF00768	D-alanyl-D-alanine carboxypeptidase
AOV_04085	PF07943	Penicillin-binding protein 5, C-terminal domain
AOV_04100	PF02163	Peptidase family M50
AOV_04100	PF17820	PDZ domain
AOV_04105	PF01103	Surface antigen
AOV_04105	PF07244	Surface antigen variable number repeat
AOV_04115	PF07977	FabA-like domain
AOV_04120	PF02142	MGS-like domain
AOV_04120	PF01808	AICARFT/IMPCHase bienzyme
AOV_04125	PF01066	CDP-alcohol phosphatidyltransferase
AOV_04135	PF00115	Cytochrome C and Quinol oxidase polypeptide I
AOV_04140	PF01464	Transglycosylase SLT domain
AOV_04155	PF13685	Iron-containing alcohol dehydrogenase
AOV_04160	PF00119	ATP synthase A chain
AOV_04175	PF00137	ATP synthase subunit C
AOV_04190	PF02491	SHS2 domain inserted in FTSA
AOV_04195	PF02386	Cation transport protein
AOV_04205	PF01171	PP-loop family
AOV_04210	PF17862	AAA+ lid domain
AOV_04210	PF01434	Peptidase family M41
AOV_04210	PF06480	FtsH Extracellular
AOV_04210	PF00004	ATPase family associated with various cellular activities (AAA)
AOV_04215	PF02810	SEC-C motif
AOV_04215	PF07517	SecA DEAD-like domain
AOV_04215	PF07516	SecA Wing and Scaffold domain
AOV_04215	PF01043	SecA preprotein cross-linking domain
AOV_04225	PF01545	Cation efflux family
AOV_04240	PF01258	Prokaryotic dksA/traR C4-type zinc finger
AOV_04250	PF02881	SRP54-type protein, helical bundle domain
AOV_04250	PF00448	SRP54-type protein, GTPase domain
AOV_04255	PF00180	Isocitrate/isopropylmalate dehydrogenase
AOV_04255	PF18324	Hypothetical protein TT1725
AOV_04260	PF01368	DHH family
AOV_04260	PF17768	RecJ OB domain
AOV_04260	PF02272	DHHA1 domain
AOV_04265	PF01743	Poly A polymerase head domain
AOV_04265	PF13735	tRNA nucleotidyltransferase domain 2 putative
AOV_04265	PF12627	Probable RNA and SrmB- binding site of polymerase A
AOV_04270	PF00334	Nucleoside diphosphate kinase
AOV_04275	PF01381	Helix-turn-helix
AOV_04300	PF01617	Surface antigen
AOV_04315	PF00361	Proton-conducting membrane transporter
AOV_04325	PF01515	Phosphate acetyl/butaryl transferase
AOV_04325	PF03949	Malic enzyme, NAD binding domain
AOV_04325	PF00390	Malic enzyme, N-terminal domain
AOV_04330	PF00005	ABC transporter
AOV_04335	PF00589	Phage integrase family
AOV_04335	PF02899	Phage integrase, N-terminal SAM-like domain
AOV_04340	PF03840	Preprotein translocase SecG subunit
AOV_04345	PF00117	Glutamine amidotransferase class-I
AOV_04345	PF06418	CTP synthase N-terminus
AOV_04350	PF01872	RibD C-terminal domain
AOV_04350	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
AOV_04355	PF01025	GrpE
AOV_04360	PF00579	tRNA synthetases class I (W and Y)
AOV_04365	PF01225	Mur ligase family, catalytic domain
AOV_04365	PF02875	Mur ligase family, glutamate ligase domain
AOV_04365	PF08245	Mur ligase middle domain
AOV_04390	PF13411	MerR HTH family regulatory protein
AOV_04395	PF00216	Bacterial DNA-binding protein
AOV_04400	PF01098	Cell cycle protein
AOV_04410	PF00731	AIR carboxylase
AOV_04420	PF02542	YgbB family
AOV_04420	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
AOV_04425	PF02542	YgbB family
AOV_04430	PF01926	50S ribosome-binding GTPase
AOV_04430	PF06071	Protein of unknown function (DUF933)
AOV_04435	PF01523	Putative modulator of DNA gyrase
AOV_04450	PF02779	Transketolase, pyrimidine binding domain
AOV_04450	PF02780	Transketolase, C-terminal domain
AOV_04465	PF00999	Sodium/hydrogen exchanger family
AOV_04465	PF02254	TrkA-N domain
AOV_04470	PF01546	Peptidase family M20/M25/M40
AOV_04470	PF07687	Peptidase dimerisation domain
AOV_04510	PF00226	DnaJ domain
AOV_04510	PF01556	DnaJ C terminal domain
AOV_04510	PF00684	DnaJ central domain
AOV_04520	PF01386	Ribosomal L25p family
AOV_04520	PF14693	Ribosomal protein TL5, C-terminal domain
AOV_04525	PF01195	Peptidyl-tRNA hydrolase
AOV_04530	PF13537	Glutamine amidotransferase domain
AOV_04530	PF00156	Phosphoribosyl transferase domain
AOV_04535	PF08338	Domain of unknown function (DUF1731)
AOV_04535	PF01370	NAD dependent epimerase/dehydratase family
AOV_04540	PF00271	Helicase conserved C-terminal domain
AOV_04540	PF17191	RecG wedge domain
AOV_04540	PF00270	DEAD/DEAH box helicase
AOV_04545	PF04127	DNA / pantothenate metabolism flavoprotein
AOV_04545	PF02441	Flavoprotein
AOV_04550	PF01926	50S ribosome-binding GTPase
AOV_04550	PF12631	MnmE helical domain
AOV_04550	PF10396	GTP-binding protein TrmE N-terminus
AOV_04555	PF00132	Bacterial transferase hexapeptide (six repeats)
AOV_04555	PF14602	Hexapeptide repeat of succinyl-transferase
AOV_04555	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
AOV_04565	PF13742	OB-fold nucleic acid binding domain
AOV_04565	PF02601	Exonuclease VII, large subunit
AOV_04570	PF00162	Phosphoglycerate kinase
AOV_04585	PF01678	Diaminopimelate epimerase
AOV_04595	PF01209	ubiE/COQ5 methyltransferase family
AOV_04605	PF00925	GTP cyclohydrolase II
AOV_04620	PF03743	Bacterial conjugation TrbI-like protein 
AOV_04625	PF00437	Type II/IV secretion system protein
AOV_04630	PF02534	Type IV secretory system Conjugative DNA transfer
AOV_04635	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
AOV_04635	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
AOV_04640	PF11953	Domain of unknown function (DUF3470)
AOV_04640	PF00037	4Fe-4S binding domain
AOV_04645	PF02445	Quinolinate synthetase A protein
AOV_04655	PF04860	Phage portal protein
AOV_04665	PF03471	Transporter associated domain
AOV_04665	PF00571	CBS domain
AOV_04670	PF01208	Uroporphyrinogen decarboxylase (URO-D)
AOV_04675	PF00510	Cytochrome c oxidase subunit III
AOV_04680	PF02075	Crossover junction endodeoxyribonuclease RuvC
AOV_04685	PF02660	Glycerol-3-phosphate acyltransferase
AOV_04690	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
AOV_04690	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
AOV_04695	PF00684	DnaJ central domain
AOV_04695	PF01556	DnaJ C terminal domain
AOV_04695	PF00226	DnaJ domain
AOV_04700	PF02092	Glycyl-tRNA synthetase beta subunit
AOV_04700	PF05746	DALR anticodon binding domain
AOV_04705	PF02091	Glycyl-tRNA synthetase alpha subunit
AOV_04720	PF01494	FAD binding domain
AOV_04730	PF02772	S-adenosylmethionine synthetase, central domain
AOV_04730	PF00438	S-adenosylmethionine synthetase, N-terminal domain
AOV_04730	PF02773	S-adenosylmethionine synthetase, C-terminal domain
AOV_04735	PF01098	Cell cycle protein
AOV_04750	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
AOV_04750	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AOV_04760	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
AOV_04760	PF12170	DNA polymerase III tau subunit V interacting with alpha
AOV_04760	PF12169	DNA polymerase III subunits gamma and tau domain III
AOV_04765	PF02575	YbaB/EbfC DNA-binding family
AOV_04770	PF02774	Semialdehyde dehydrogenase, dimerisation domain
AOV_04770	PF01118	Semialdehyde dehydrogenase, NAD binding domain
AOV_04775	PF01027	Inhibitor of apoptosis-promoting Bax1
AOV_04780	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
AOV_04785	PF05198	Translation initiation factor IF-3, N-terminal domain
AOV_04785	PF00707	Translation initiation factor IF-3, C-terminal domain
AOV_04790	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
AOV_04790	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
AOV_04790	PF03129	Anticodon binding domain
AOV_04795	PF00994	Probable molybdopterin binding domain
AOV_04795	PF18146	Damage-inducible protein CinA KH domain
AOV_04795	PF02464	Competence-damaged protein
AOV_04800	PF01245	Ribosomal protein L19
AOV_04805	PF01746	tRNA (Guanine-1)-methyltransferase
AOV_04810	PF05239	PRC-barrel domain
AOV_04810	PF01782	RimM N-terminal domain
AOV_04815	PF17762	HTH domain found in ParB protein
AOV_04815	PF02195	ParB-like nuclease domain
AOV_04820	PF13614	AAA domain
AOV_04825	PF02130	Uncharacterized protein family UPF0054
AOV_04830	PF12327	FtsZ family, C-terminal domain
AOV_04830	PF00091	Tubulin/FtsZ family, GTPase domain
AOV_04850	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
AOV_04885	PF02355	Protein export membrane protein
AOV_04890	PF17757	UvrB interaction domain
AOV_04890	PF12344	Ultra-violet resistance protein B
AOV_04890	PF02151	UvrB/uvrC motif
AOV_04890	PF04851	Type III restriction enzyme, res subunit
AOV_04890	PF00271	Helicase conserved C-terminal domain
AOV_04925	PF03167	Uracil DNA glycosylase superfamily
AOV_04930	PF01327	Polypeptide deformylase
AOV_04940	PF01649	Ribosomal protein S20
AOV_04950	PF01790	Prolipoprotein diacylglyceryl transferase
AOV_04955	PF03023	Lipid II flippase MurJ
AOV_05000	PF02463	RecF/RecN/SMC N terminal domain
AOV_05005	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
AOV_05005	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
AOV_05020	PF01367	5'-3' exonuclease, C-terminal SAM fold
AOV_05020	PF00476	DNA polymerase family A
AOV_05020	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
AOV_05025	PF00834	Ribulose-phosphate 3 epimerase family
AOV_05030	PF02405	Permease MlaE
AOV_05035	PF00005	ABC transporter
AOV_05045	PF00348	Polyprenyl synthetase
AOV_05050	PF00953	Glycosyl transferase family 4
AOV_05050	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
AOV_05055	PF03951	Glutamine synthetase, beta-Grasp domain
AOV_05055	PF00120	Glutamine synthetase, catalytic domain
AOV_05065	PF00579	tRNA synthetases class I (W and Y)
AOV_05070	PF00155	Aminotransferase class I and II
AOV_05075	PF02021	Uncharacterised protein family UPF0102
AOV_05080	PF02355	Protein export membrane protein
AOV_05080	PF07549	SecD/SecF GG Motif
AOV_05085	PF00905	Penicillin binding protein transpeptidase domain
AOV_05085	PF03717	Penicillin-binding Protein dimerisation domain
AOV_05095	PF01791	DeoC/LacD family aldolase
AOV_05105	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
AOV_05105	PF00364	Biotin-requiring enzyme
AOV_05105	PF02817	e3 binding domain
AOV_05115	PF00117	Glutamine amidotransferase class-I
AOV_05115	PF00958	GMP synthase C terminal domain
AOV_05120	PF00285	Citrate synthase, C-terminal domain
AOV_05135	PF12704	MacB-like periplasmic core domain
AOV_05135	PF02687	FtsX-like permease family
AOV_05160	PF00213	ATP synthase delta (OSCP) subunit
AOV_05165	PF02874	ATP synthase alpha/beta family, beta-barrel domain
AOV_05165	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
AOV_05165	PF00306	ATP synthase alpha/beta chain, C terminal domain
AOV_05170	PF01272	Transcription elongation factor, GreA/GreB, C-term
AOV_05170	PF03449	Transcription elongation factor, N-terminal
AOV_05175	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
AOV_05175	PF00925	GTP cyclohydrolase II
AOV_05180	PF01668	SmpB protein
AOV_05185	PF08264	Anticodon-binding domain of tRNA
AOV_05185	PF00133	tRNA synthetases class I (I, L, M and V)
AOV_05190	PF01578	Cytochrome C assembly protein
AOV_05190	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
AOV_05235	PF03966	Trm112p-like protein
