APH_1060 4cb39340cfecafa15b2af6371732e471 307 Gene3D G3DSA:1.10.3720.10 73 303 5.1E-36 T 11-10-2018 IPR035906 MetI-like superfamily APH_1060 4cb39340cfecafa15b2af6371732e471 307 SUPERFAMILY SSF161098 27 297 9.81E-34 T 11-10-2018 IPR035906 MetI-like superfamily APH_1060 4cb39340cfecafa15b2af6371732e471 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 299 9.9E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 SUPERFAMILY SSF50475 11 206 6.79E-62 T 11-10-2018 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 111 9.6E-20 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 165 206 8.9E-15 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 175 188 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 PIRSF PIRSF000190 2 206 2.2E-69 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 2 206 35.805 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 APH_1008 8de5cd7b1ee583c31af5be309eedf3cc 206 Gene3D G3DSA:2.30.110.10 11 206 1.8E-68 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 APH_1268 5d6d406830928d102088bd6437eaead2 171 SUPERFAMILY SSF50346 97 165 5.81E-11 T 11-10-2018 IPR011033 PRC-barrel-like superfamily APH_1268 5d6d406830928d102088bd6437eaead2 171 Pfam PF01782 RimM N-terminal domain 10 86 2.5E-17 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 APH_1268 5d6d406830928d102088bd6437eaead2 171 Gene3D G3DSA:2.30.30.240 92 168 4.5E-8 T 11-10-2018 APH_1268 5d6d406830928d102088bd6437eaead2 171 Gene3D G3DSA:2.40.30.60 6 91 7.2E-17 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 APH_1268 5d6d406830928d102088bd6437eaead2 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 167 20.266 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APH_1268 5d6d406830928d102088bd6437eaead2 171 SUPERFAMILY SSF50447 7 91 3.53E-16 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 222 236 4.2E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 256 283 4.2E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 158 178 4.2E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 418 437 4.2E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 190 204 4.2E-47 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 SUPERFAMILY SSF48295 355 458 6.54E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 ProSitePatterns PS01008 DnaA protein signature. 418 437 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:1.10.8.60 291 362 2.2E-23 T 11-10-2018 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:1.10.1750.10 367 459 1.8E-31 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 SMART SM00382 157 285 4.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 10 459 31.268 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:3.30.300.180 8 85 7.3E-8 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF00308 Bacterial dnaA protein 123 341 4.0E-86 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 437 4.3E-28 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 SUPERFAMILY SSF52540 122 337 2.54E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 SMART SM00760 368 437 1.6E-38 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:3.40.50.300 107 288 3.4E-49 T 11-10-2018 APH_0474 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF11638 DnaA N-terminal domain 13 72 5.3E-17 T 11-10-2018 IPR024633 DnaA N-terminal domain APH_1227 236f056ac8342cb5235200652ac72675 305 SUPERFAMILY SSF52540 100 303 8.94E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1227 236f056ac8342cb5235200652ac72675 305 Gene3D G3DSA:3.40.50.300 103 292 4.0E-99 T 11-10-2018 APH_1227 236f056ac8342cb5235200652ac72675 305 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 7.8E-73 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_1227 236f056ac8342cb5235200652ac72675 305 SMART SM00962 103 304 1.2E-105 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_1227 236f056ac8342cb5235200652ac72675 305 SMART SM00382 102 239 3.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1227 236f056ac8342cb5235200652ac72675 305 SMART SM00963 11 90 3.7E-8 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_1227 236f056ac8342cb5235200652ac72675 305 SUPERFAMILY SSF47364 6 74 7.33E-11 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 APH_1227 236f056ac8342cb5235200652ac72675 305 Gene3D G3DSA:1.20.120.140 9 302 4.0E-99 T 11-10-2018 APH_0555 1718f04de1ae42629c1833df116999e9 462 SMART SM00840 348 410 3.9E-8 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 318 2.1E-111 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 1.7E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 1.7E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 1.7E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 1.7E-28 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 SUPERFAMILY SSF52374 2 317 5.63E-85 T 11-10-2018 APH_0555 1718f04de1ae42629c1833df116999e9 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 461 36.708 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 APH_0555 1718f04de1ae42629c1833df116999e9 462 Gene3D G3DSA:1.20.120.640 311 461 1.1E-26 T 11-10-2018 APH_0555 1718f04de1ae42629c1833df116999e9 462 SUPERFAMILY SSF47323 344 459 6.02E-25 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0555 1718f04de1ae42629c1833df116999e9 462 Gene3D G3DSA:3.40.50.620 1 310 1.1E-117 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0555 1718f04de1ae42629c1833df116999e9 462 Pfam PF09190 DALR domain 351 399 1.3E-9 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 Gene3D G3DSA:3.50.50.60 17 426 3.9E-168 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 604 7.8E-44 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 SUPERFAMILY SSF46977 461 604 1.7E-48 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 51 60 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 Gene3D G3DSA:1.20.58.100 443 554 3.1E-37 T 11-10-2018 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 Pfam PF00890 FAD binding domain 17 415 1.2E-121 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 Gene3D G3DSA:3.90.700.10 256 359 3.9E-168 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 Gene3D G3DSA:4.10.80.40 555 604 6.5E-11 T 11-10-2018 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 SUPERFAMILY SSF56425 246 364 5.83E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 PIRSF PIRSF000171 7 594 1.8E-39 T 11-10-2018 APH_0158 7a76f8f1598122c1f9675b5444a5e4a7 604 SUPERFAMILY SSF51905 7 438 5.41E-76 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0794 4fdbe4b97720dd8d8ca05fb6ce693eed 239 SUPERFAMILY SSF75217 83 235 5.23E-40 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases APH_0794 4fdbe4b97720dd8d8ca05fb6ce693eed 239 Pfam PF04452 RNA methyltransferase 27 234 3.0E-53 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 APH_0794 4fdbe4b97720dd8d8ca05fb6ce693eed 239 Gene3D G3DSA:3.40.1280.10 81 237 7.9E-42 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APH_0794 4fdbe4b97720dd8d8ca05fb6ce693eed 239 SUPERFAMILY SSF88697 10 75 2.14E-14 T 11-10-2018 IPR015947 PUA-like superfamily APH_0794 4fdbe4b97720dd8d8ca05fb6ce693eed 239 PIRSF PIRSF015601 9 239 2.8E-58 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 APH_0794 4fdbe4b97720dd8d8ca05fb6ce693eed 239 Gene3D G3DSA:2.40.240.20 9 76 1.3E-16 T 11-10-2018 APH_1026 4636e849f2221db015af98b33f6b18d7 160 Pfam PF00466 Ribosomal protein L10 3 98 9.9E-19 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APH_1026 4636e849f2221db015af98b33f6b18d7 160 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 35 157 7.0E-4 T 11-10-2018 APH_1026 4636e849f2221db015af98b33f6b18d7 160 Gene3D G3DSA:3.30.70.1730 1 132 3.8E-28 T 11-10-2018 APH_1026 4636e849f2221db015af98b33f6b18d7 160 SUPERFAMILY SSF160369 3 158 7.32E-34 T 11-10-2018 APH_0129 00b119cf01740395cbb57e9603490f61 225 SUPERFAMILY SSF55307 32 147 3.43E-43 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 APH_0129 00b119cf01740395cbb57e9603490f61 225 SMART SM00865 35 153 2.4E-57 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 APH_0129 00b119cf01740395cbb57e9603490f61 225 PRINTS PR00423 Cell division protein FtsZ signature 17 39 2.5E-20 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_0129 00b119cf01740395cbb57e9603490f61 225 PRINTS PR00423 Cell division protein FtsZ signature 40 61 2.5E-20 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_0129 00b119cf01740395cbb57e9603490f61 225 Pfam PF12327 FtsZ family, C-terminal domain 50 145 2.1E-39 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal APH_0129 00b119cf01740395cbb57e9603490f61 225 Gene3D G3DSA:3.30.1330.20 34 151 1.9E-42 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 SUPERFAMILY SSF52518 342 517 1.03E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 Gene3D G3DSA:3.40.50.920 530 654 9.0E-37 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 Pfam PF02779 Transketolase, pyrimidine binding domain 347 516 5.1E-44 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 SMART SM00861 346 518 2.1E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 SUPERFAMILY SSF52518 5 306 1.23E-106 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 Pfam PF02780 Transketolase, C-terminal domain 543 646 1.6E-7 T 11-10-2018 IPR033248 Transketolase, C-terminal domain APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 Gene3D G3DSA:3.40.50.970 3 323 1.8E-110 T 11-10-2018 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 313 2.8E-117 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 SUPERFAMILY SSF52922 528 656 4.43E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 ProSitePatterns PS00802 Transketolase signature 2. 459 475 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APH_0340 c01b89587678ac8b98cb8c6b89ffee30 659 Gene3D G3DSA:3.40.50.970 326 523 5.7E-72 T 11-10-2018 APH_0111 3313581f85a3e8cc3c1e6b6d4746c39d 244 Gene3D G3DSA:3.40.1160.10 7 244 8.7E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily APH_0111 3313581f85a3e8cc3c1e6b6d4746c39d 244 PIRSF PIRSF005650 8 244 4.3E-86 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 APH_0111 3313581f85a3e8cc3c1e6b6d4746c39d 244 SUPERFAMILY SSF53633 12 243 6.81E-62 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily APH_0111 3313581f85a3e8cc3c1e6b6d4746c39d 244 Pfam PF00696 Amino acid kinase family 15 222 1.1E-25 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 APH_0111 3313581f85a3e8cc3c1e6b6d4746c39d 244 Hamap MF_01220_B Uridylate kinase [pyrH]. 11 243 41.375 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 Pfam PF08264 Anticodon-binding domain of tRNA 621 763 7.1E-26 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF47323 594 801 9.53E-37 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 Hamap MF_02005 Valine--tRNA ligase [valS]. 8 794 26.112 T 11-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:3.90.740.10 177 353 6.7E-215 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF52374 5 587 4.98E-114 T 11-10-2018 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 SUPERFAMILY SSF50677 194 352 7.59E-38 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 3.4E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 3.4E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 464 485 3.4E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 3.4E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 3.4E-17 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:1.10.730.10 11 750 6.7E-215 T 11-10-2018 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 Gene3D G3DSA:3.40.50.620 28 543 6.7E-215 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1224 df064baa7a91493db8d5fc693ef9810d 806 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1224 df064baa7a91493db8d5fc693ef9810d 806 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 579 2.6E-113 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 SUPERFAMILY SSF51735 1 122 4.99E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_1053 45002473ff7e6de1c1ccec94675af12a 295 Pfam PF02629 CoA binding domain 6 99 6.2E-33 T 11-10-2018 IPR003781 CoA-binding GO:0048037 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 Gene3D G3DSA:3.40.50.261 124 290 1.5E-67 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 41.472 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site APH_1053 45002473ff7e6de1c1ccec94675af12a 295 Pfam PF00549 CoA-ligase 151 272 2.1E-18 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 PIRSF PIRSF001553 1 292 1.3E-126 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 SUPERFAMILY SSF52210 123 289 1.7E-50 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.8E-34 T 11-10-2018 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.8E-34 T 11-10-2018 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 2.8E-34 T 11-10-2018 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.8E-34 T 11-10-2018 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APH_1053 45002473ff7e6de1c1ccec94675af12a 295 Gene3D G3DSA:3.40.50.720 1 123 9.7E-53 T 11-10-2018 APH_1053 45002473ff7e6de1c1ccec94675af12a 295 SMART SM00881 4 100 2.9E-37 T 11-10-2018 IPR003781 CoA-binding GO:0048037 APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 Gene3D G3DSA:1.20.1640.10 121 298 6.9E-12 T 11-10-2018 APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 Pfam PF02355 Protein export membrane protein 119 287 3.8E-55 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 PRINTS PR01755 Bacterial translocase SecF protein signature 39 54 3.3E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 PRINTS PR01755 Bacterial translocase SecF protein signature 202 220 3.3E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 PRINTS PR01755 Bacterial translocase SecF protein signature 154 168 3.3E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 PRINTS PR01755 Bacterial translocase SecF protein signature 234 249 3.3E-26 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 12 297 26.112 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 SUPERFAMILY SSF82866 143 286 9.55E-37 T 11-10-2018 APH_1326 e793d2e3081809ec18e8365d9ea6bc5f 305 Pfam PF07549 SecD/SecF GG Motif 35 58 5.3E-6 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 328 341 2.7E-8 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 300 314 2.7E-8 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 221 236 2.7E-8 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 352 364 2.7E-8 T 11-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 1.0E-37 T 11-10-2018 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 414 508 3.6E-22 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 SMART SM00382 222 403 4.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 Gene3D G3DSA:3.40.50.300 200 515 9.2E-60 T 11-10-2018 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 Pfam PF01078 Magnesium chelatase, subunit ChlI 202 402 3.5E-88 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 SUPERFAMILY SSF54211 8 167 6.45E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 SUPERFAMILY SSF52540 201 514 7.78E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 300 315 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APH_0754 e88c07ecd4a2e619da6ea56625d03bad 517 Gene3D G3DSA:3.30.230.10 5 169 8.5E-10 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0225 f78e076e337e9450ffdebe9d0e67212d 260 Gene3D G3DSA:3.40.50.880 1 260 5.9E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0225 f78e076e337e9450ffdebe9d0e67212d 260 SMART SM01211 1 259 9.8E-101 T 11-10-2018 APH_0225 f78e076e337e9450ffdebe9d0e67212d 260 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 259 4.8E-68 T 11-10-2018 APH_0225 f78e076e337e9450ffdebe9d0e67212d 260 PIRSF PIRSF001586 1 260 4.7E-74 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 APH_0225 f78e076e337e9450ffdebe9d0e67212d 260 SUPERFAMILY SSF52317 1 259 5.33E-65 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:1.10.1790.20 1124 1305 1.2E-61 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:1.10.132.30 641 781 8.2E-62 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 14 343 4.9E-74 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 757 1306 5.8E-69 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 SMART SM00663 235 515 2.4E-160 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 SUPERFAMILY SSF64484 15 1354 0.0 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:1.10.274.100 561 640 3.6E-15 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.50.100 939 1013 2.2E-20 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:1.10.274.100 491 560 3.0E-17 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:1.10.150.390 1307 1367 4.4E-27 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 644 1.6E-24 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:1.10.40.90 375 417 1.5E-18 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 410 486 4.8E-26 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 395 3.8E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.50.100 1014 1115 1.6E-28 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Gene3D G3DSA:2.40.50.100 1140 1206 1.2E-61 T 11-10-2018 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 9 1368 17.71 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1023 f8c0f0748e8b10e468f46d0c90b0e1b1 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 754 9.0E-17 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 Gene3D G3DSA:2.60.410.10 273 362 4.7E-14 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 SUPERFAMILY SSF69189 273 362 3.14E-15 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 Gene3D G3DSA:3.40.710.10 22 271 7.9E-70 T 11-10-2018 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 SUPERFAMILY SSF56601 7 272 1.13E-65 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 249 1.0E-58 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 361 2.8E-13 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 3.2E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 3.2E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 3.2E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APH_1214 434cd55a0b6036ecf2f638257ddd3612 386 SMART SM00936 273 363 2.8E-19 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 5.0E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 5.0E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 5.0E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 5.0E-28 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 329 37.501 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 Gene3D G3DSA:1.10.240.10 185 296 2.1E-125 T 11-10-2018 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 SUPERFAMILY SSF52374 1 328 8.44E-89 T 11-10-2018 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 Pfam PF00579 tRNA synthetases class I (W and Y) 2 282 1.1E-72 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0035 94fb703b3a9aa70aec020d373a8092e5 331 Gene3D G3DSA:3.40.50.620 2 327 2.1E-125 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0469 9d5fa08f63f806fe7ff5afa19a471020 461 Gene3D G3DSA:3.40.630.150 183 461 1.3E-108 T 11-10-2018 APH_0469 9d5fa08f63f806fe7ff5afa19a471020 461 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 184 431 1.8E-103 T 11-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 APH_0469 9d5fa08f63f806fe7ff5afa19a471020 461 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 94 181 2.2E-20 T 11-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 APH_0469 9d5fa08f63f806fe7ff5afa19a471020 461 Gene3D G3DSA:1.20.140.90 46 182 1.1E-19 T 11-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 APH_1233 afb088b299571b71654a86fde6f1921e 529 SUPERFAMILY SSF52402 195 441 2.65E-48 T 11-10-2018 APH_1233 afb088b299571b71654a86fde6f1921e 529 SUPERFAMILY SSF52317 3 198 1.24E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_1233 afb088b299571b71654a86fde6f1921e 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.2E-7 T 11-10-2018 APH_1233 afb088b299571b71654a86fde6f1921e 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.2E-7 T 11-10-2018 APH_1233 afb088b299571b71654a86fde6f1921e 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.2E-7 T 11-10-2018 APH_1233 afb088b299571b71654a86fde6f1921e 529 Gene3D G3DSA:3.40.50.620 207 400 8.3E-71 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1233 afb088b299571b71654a86fde6f1921e 529 Pfam PF00117 Glutamine amidotransferase class-I 6 197 7.8E-36 T 11-10-2018 IPR017926 Glutamine amidotransferase APH_1233 afb088b299571b71654a86fde6f1921e 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 529 46.662 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 APH_1233 afb088b299571b71654a86fde6f1921e 529 Gene3D G3DSA:3.30.300.10 401 529 6.1E-46 T 11-10-2018 APH_1233 afb088b299571b71654a86fde6f1921e 529 SUPERFAMILY SSF54810 400 529 5.23E-44 T 11-10-2018 APH_1233 afb088b299571b71654a86fde6f1921e 529 Pfam PF00958 GMP synthase C terminal domain 430 528 2.0E-35 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 APH_1233 afb088b299571b71654a86fde6f1921e 529 Gene3D G3DSA:3.40.50.880 2 206 4.1E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_1361 106e506ff3cca9f268dd72bcfce7e7a8 365 SUPERFAMILY SSF56925 28 365 3.66E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1361 106e506ff3cca9f268dd72bcfce7e7a8 365 Pfam PF01617 Surface antigen 29 365 3.4E-36 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0801 a28fe052825965594204121074fc9f44 164 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 12 146 27.749 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0801 a28fe052825965594204121074fc9f44 164 Pfam PF12838 4Fe-4S dicluster domain 64 118 5.2E-13 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APH_0801 a28fe052825965594204121074fc9f44 164 SUPERFAMILY SSF54862 38 146 1.26E-27 T 11-10-2018 APH_0801 a28fe052825965594204121074fc9f44 164 Gene3D G3DSA:3.30.70.3270 38 163 1.7E-42 T 11-10-2018 APH_0801 a28fe052825965594204121074fc9f44 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_1217 391734014dc70ce17507ccc229f22a16 140 Pfam PF00334 Nucleoside diphosphate kinase 3 137 1.7E-54 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 SUPERFAMILY SSF54919 2 139 3.8E-56 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 Gene3D G3DSA:3.30.70.141 1 140 3.3E-56 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 2.8E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 2.8E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 2.8E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 2.8E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 2.8E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 SMART SM00562 2 139 1.4E-78 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_1217 391734014dc70ce17507ccc229f22a16 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 137 34.355 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:3.50.7.10 171 380 1.4E-189 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:3.30.260.10 137 411 1.4E-189 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 26 52 2.2E-65 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 351 376 2.2E-65 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 82 109 2.2E-65 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 267 290 2.2E-65 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 399 420 2.2E-65 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 527 1.0E-92 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:1.10.560.10 13 524 1.4E-189 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF48592 13 524 4.25E-50 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 Hamap MF_00600 60 kDa chaperonin [groL]. 1 547 35.07 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 406 417 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF52029 185 377 7.33E-75 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily APH_0240 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF54849 139 203 6.87E-20 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 99 109 4.3E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 32 50 4.3E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 11 27 4.3E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 11-10-2018 IPR019808 Histidine triad, conserved site APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 SUPERFAMILY SSF54197 6 113 3.97E-30 T 11-10-2018 IPR036265 HIT-like superfamily APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 Gene3D G3DSA:3.30.428.10 4 123 1.7E-31 T 11-10-2018 IPR036265 HIT-like superfamily APH_0860 22c9eb3d5aa9c11034293f3aa3b3652c 124 Pfam PF01230 HIT domain 17 111 7.7E-25 T 11-10-2018 IPR001310 Histidine triad (HIT) protein APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 SUPERFAMILY SSF50715 6 193 6.45E-52 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 99 2.0E-38 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Pfam PF01386 Ribosomal L25p family 11 96 9.4E-23 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 188 7.8E-25 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 7 189 28.155 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Gene3D G3DSA:2.40.240.10 4 99 1.9E-26 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APH_1302 0f4ac0d2fdb7bf8fdbceb8d93d19ae84 211 Gene3D G3DSA:2.170.120.20 101 196 1.6E-22 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal APH_0711 66aba3fbf8d1c31c58db272f4a847586 340 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 44 59 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0711 66aba3fbf8d1c31c58db272f4a847586 340 Pfam PF00146 NADH dehydrogenase 6 325 2.3E-122 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0711 66aba3fbf8d1c31c58db272f4a847586 340 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 2 332 23.947 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0711 66aba3fbf8d1c31c58db272f4a847586 340 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 213 226 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 337 392 1.4E-26 T 11-10-2018 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 178 3.4E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50447 204 298 1.89E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50465 302 393 2.88E-34 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF52540 5 225 3.16E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 1.1E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 205 333 4.9E-50 T 11-10-2018 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 1.7E-30 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:3.40.50.300 1 202 1.6E-63 T 11-10-2018 APH_0278 8fddb4e43ae9227187b8ce2db6835ade 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.386 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 337 392 1.4E-26 T 11-10-2018 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 178 3.4E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50447 204 298 1.89E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF50465 302 393 2.88E-34 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 SUPERFAMILY SSF52540 5 225 3.16E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 1.1E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.1E-23 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:2.40.30.10 205 333 4.9E-50 T 11-10-2018 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 1.7E-30 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Gene3D G3DSA:3.40.50.300 1 202 1.6E-63 T 11-10-2018 APH_1032 8fddb4e43ae9227187b8ce2db6835ade 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.386 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APH_0968 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:1.10.8.60 495 588 5.3E-27 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APH_0968 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:3.30.230.10 589 776 1.9E-77 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0968 04d866ad0792e22548222c6dad96883b 802 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 202 4.8E-33 T 11-10-2018 IPR003111 Lon, substrate-binding domain APH_0968 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:3.40.50.300 318 494 3.8E-62 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:2.30.130.40 1 117 1.7E-28 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 Hamap MF_01973 Lon protease [lon]. 9 776 64.403 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APH_0968 04d866ad0792e22548222c6dad96883b 802 SMART SM00382 352 498 7.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0968 04d866ad0792e22548222c6dad96883b 802 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 2.4E-20 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_0968 04d866ad0792e22548222c6dad96883b 802 PIRSF PIRSF001174 1 778 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APH_0968 04d866ad0792e22548222c6dad96883b 802 SUPERFAMILY SSF88697 9 201 2.73E-39 T 11-10-2018 IPR015947 PUA-like superfamily APH_0968 04d866ad0792e22548222c6dad96883b 802 SUPERFAMILY SSF54211 599 774 5.69E-56 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0968 04d866ad0792e22548222c6dad96883b 802 SUPERFAMILY SSF52540 317 580 2.0E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0968 04d866ad0792e22548222c6dad96883b 802 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 9.1E-91 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 APH_0968 04d866ad0792e22548222c6dad96883b 802 Gene3D G3DSA:1.20.58.1480 123 246 2.9E-31 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 2.4E-51 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 2.4E-51 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 2.4E-51 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 2.4E-51 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 2.4E-51 T 11-10-2018 APH_0968 04d866ad0792e22548222c6dad96883b 802 SMART SM00464 8 203 6.4E-52 T 11-10-2018 IPR003111 Lon, substrate-binding domain APH_0415 e918510e24e1e2158b99b63fc5301e88 509 SUPERFAMILY SSF52096 6 251 7.96E-76 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily APH_0415 e918510e24e1e2158b99b63fc5301e88 509 Pfam PF01039 Carboxyl transferase domain 27 507 1.2E-191 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 APH_0415 e918510e24e1e2158b99b63fc5301e88 509 Gene3D G3DSA:3.90.226.10 257 509 5.7E-92 T 11-10-2018 APH_0415 e918510e24e1e2158b99b63fc5301e88 509 SUPERFAMILY SSF52096 223 509 1.23E-89 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily APH_0415 e918510e24e1e2158b99b63fc5301e88 509 Gene3D G3DSA:3.90.226.10 4 255 1.1E-90 T 11-10-2018 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF02151 UvrB/uvrC motif 619 649 6.2E-7 T 11-10-2018 IPR001943 UVR domain GO:0005515 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:4.10.860.10 604 652 2.9E-8 T 11-10-2018 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 1 228 1.2E-74 T 11-10-2018 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 SMART SM00490 458 544 1.4E-20 T 11-10-2018 IPR001650 Helicase, C-terminal APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 413 594 1.6E-50 T 11-10-2018 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF00271 Helicase conserved C-terminal domain 442 543 1.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Gene3D G3DSA:3.40.50.300 267 412 1.4E-47 T 11-10-2018 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF52540 3 413 3.09E-120 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF46600 616 650 8.63E-8 T 11-10-2018 IPR036876 UVR domain superfamily APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF12344 Ultra-violet resistance protein B 550 591 6.2E-23 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Pfam PF04851 Type III restriction enzyme, res subunit 15 110 2.8E-8 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 SUPERFAMILY SSF52540 34 566 1.02E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 SMART SM00487 8 423 2.4E-19 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_1367 1f3410634c7813e5ab08d5959d98d5b0 653 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 651 40.273 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 APH_0736 b03ae79c956a445c31d5807ba4d01562 245 Gene3D G3DSA:2.40.50.140 1 73 3.1E-5 T 11-10-2018 APH_0736 b03ae79c956a445c31d5807ba4d01562 245 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 127 233 9.0E-32 T 11-10-2018 APH_0736 b03ae79c956a445c31d5807ba4d01562 245 SUPERFAMILY SSF57863 81 181 3.4E-8 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger APH_0736 b03ae79c956a445c31d5807ba4d01562 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 232 13.772 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APH_0736 b03ae79c956a445c31d5807ba4d01562 245 Pfam PF11967 Recombination protein O N terminal 1 74 6.5E-13 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal APH_0736 b03ae79c956a445c31d5807ba4d01562 245 Pfam PF02565 Recombination protein O C terminal 81 222 3.2E-13 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APH_1179 680c795a6b71ecbf1ddf042628511376 611 SUPERFAMILY SSF140990 408 593 4.32E-67 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 APH_1179 680c795a6b71ecbf1ddf042628511376 611 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 195 325 6.7E-44 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_1179 680c795a6b71ecbf1ddf042628511376 611 Pfam PF01434 Peptidase family M41 387 587 6.1E-72 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 APH_1179 680c795a6b71ecbf1ddf042628511376 611 Gene3D G3DSA:1.20.58.760 403 598 3.2E-70 T 11-10-2018 APH_1179 680c795a6b71ecbf1ddf042628511376 611 Gene3D G3DSA:1.10.8.60 328 402 5.0E-30 T 11-10-2018 APH_1179 680c795a6b71ecbf1ddf042628511376 611 SMART SM00382 190 329 4.4E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1179 680c795a6b71ecbf1ddf042628511376 611 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 2 602 36.013 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 APH_1179 680c795a6b71ecbf1ddf042628511376 611 ProSitePatterns PS00674 AAA-protein family signature. 297 315 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APH_1179 680c795a6b71ecbf1ddf042628511376 611 Gene3D G3DSA:3.40.50.300 145 326 3.3E-68 T 11-10-2018 APH_1179 680c795a6b71ecbf1ddf042628511376 611 SUPERFAMILY SSF52540 151 397 1.65E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 308 621 1.9E-52 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 Pfam PF01578 Cytochrome C assembly protein 83 290 7.4E-33 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 237 257 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 303 322 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 287 303 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 152 174 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 267 287 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 74 100 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 203 229 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 125 142 2.4E-65 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 387 406 1.2E-5 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 106 129 1.2E-5 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 306 321 1.2E-5 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 182 197 1.2E-5 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1271 cda01e79fc73a06ed3efb92ffa5847ba 637 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 344 361 1.2E-5 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 380 38.953 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 SUPERFAMILY SSF51735 2 148 1.38E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 SUPERFAMILY SSF55347 124 260 1.5E-51 T 11-10-2018 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 SUPERFAMILY SSF69055 288 382 3.66E-26 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 225 1.3E-35 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 371 5.5E-33 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 PIRSF PIRSF006205 1 385 3.6E-125 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 Gene3D G3DSA:3.40.50.720 1 148 2.1E-37 T 11-10-2018 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 Gene3D G3DSA:1.10.1740.10 298 385 4.5E-23 T 11-10-2018 APH_0440 7ac879babd7c1e9e1f78278d03e7a7e2 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 1.7E-25 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:1.10.300.10 108 206 4.8E-88 T 11-10-2018 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 SMART SM00788 3 423 6.9E-238 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 434 177.235 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:3.90.170.10 266 429 2.1E-57 T 11-10-2018 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 SUPERFAMILY SSF52540 1 423 4.04E-154 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Gene3D G3DSA:3.40.440.10 5 255 4.8E-88 T 11-10-2018 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 Pfam PF00709 Adenylosuccinate synthetase 4 422 1.8E-155 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APH_0336 86a13e90ebc01e2ecfcda61a0c94ff9d 434 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 APH_1240 22bcdede5fd9e7190c3e2089267eaef9 282 SUPERFAMILY SSF56925 45 281 5.76E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1240 22bcdede5fd9e7190c3e2089267eaef9 282 Gene3D G3DSA:2.40.160.20 71 281 2.9E-16 T 11-10-2018 APH_1240 22bcdede5fd9e7190c3e2089267eaef9 282 Pfam PF01617 Surface antigen 43 281 7.1E-80 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1198 a07321a7575dda84ee5e3375100b3147 406 Gene3D G3DSA:3.30.559.10 175 406 1.3E-93 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 APH_1198 a07321a7575dda84ee5e3375100b3147 406 SUPERFAMILY SSF52777 176 404 2.09E-87 T 11-10-2018 APH_1198 a07321a7575dda84ee5e3375100b3147 406 Pfam PF00364 Biotin-requiring enzyme 14 78 4.1E-15 T 11-10-2018 IPR000089 Biotin/lipoyl attachment APH_1198 a07321a7575dda84ee5e3375100b3147 406 Gene3D G3DSA:2.40.50.100 5 84 2.0E-17 T 11-10-2018 APH_1198 a07321a7575dda84ee5e3375100b3147 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 403 1.4E-81 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 APH_1198 a07321a7575dda84ee5e3375100b3147 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 APH_1198 a07321a7575dda84ee5e3375100b3147 406 SUPERFAMILY SSF51230 15 95 2.36E-17 T 11-10-2018 IPR011053 Single hybrid motif APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Pfam PF08529 NusA N-terminal domain 11 144 8.0E-19 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Pfam PF14520 Helix-hairpin-helix domain 451 509 2.9E-6 T 11-10-2018 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF69705 9 145 8.37E-23 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:2.40.50.140 155 217 6.5E-18 T 11-10-2018 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:3.30.1480.10 8 145 7.4E-17 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SMART SM00316 153 219 3.0E-9 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF47794 448 511 2.94E-6 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF47794 375 433 1.55E-10 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 448 25.568 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:3.30.300.20 297 366 3.1E-22 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:1.10.150.20 373 438 3.1E-15 T 11-10-2018 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Gene3D G3DSA:3.30.300.20 218 296 1.1E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 Pfam PF13184 NusA-like KH domain 249 317 3.0E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SMART SM00322 323 384 0.28 T 11-10-2018 IPR004087 K Homology domain GO:0003676 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SMART SM00322 249 322 0.004 T 11-10-2018 IPR004087 K Homology domain GO:0003676 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF54814 221 296 9.16E-27 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF50249 151 218 5.24E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0445 35f81952572cbac7b2c2a4baf098cf2f 514 SUPERFAMILY SSF54814 298 360 1.18E-14 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:3.90.199.10 30 509 3.3E-205 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 889 22.747 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 482 1.3E-149 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 SUPERFAMILY SSF101904 521 897 6.02E-93 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:3.30.1360.40 233 329 3.3E-205 T 11-10-2018 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:2.120.10.90 518 747 3.5E-67 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:1.10.268.10 366 481 3.3E-205 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 SMART SM00434 8 487 1.1E-244 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Gene3D G3DSA:2.120.10.90 751 888 2.9E-32 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 SUPERFAMILY SSF56719 27 509 1.26E-166 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 791 836 2.2E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 577 625 3.1E-4 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 527 572 6.2E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 841 887 1.3E-13 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 638 681 0.01 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_0899 4fc79da38ecc7d150d39a431ad172f03 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 685 732 1.1E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APH_0125 037bdcd564180213984027702139006e 206 Pfam PF00005 ABC transporter 18 155 4.7E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0125 037bdcd564180213984027702139006e 206 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0125 037bdcd564180213984027702139006e 206 Gene3D G3DSA:3.40.50.300 1 204 1.5E-37 T 11-10-2018 APH_0125 037bdcd564180213984027702139006e 206 SUPERFAMILY SSF52540 2 193 2.77E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 SMART SM00863 658 700 4.2E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF55186 556 711 2.22E-45 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Gene3D G3DSA:3.30.54.20 628 681 1.9E-44 T 11-10-2018 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF50447 455 556 2.47E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 5.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 272 288 5.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 5.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 5.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 296 309 5.7E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Gene3D G3DSA:2.40.30.130 450 556 6.4E-10 T 11-10-2018 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF55681 6 246 8.2E-102 T 11-10-2018 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Pfam PF01411 tRNA synthetases class II (A) 9 560 2.9E-202 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Gene3D G3DSA:3.30.980.10 560 699 1.9E-44 T 11-10-2018 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 700 7.5E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Gene3D G3DSA:3.10.310.40 765 867 1.8E-8 T 11-10-2018 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Gene3D G3DSA:3.30.930.10 3 243 3.0E-104 T 11-10-2018 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 156.536 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APH_1059 ad9b5902f216362822ee6e0993d22bbc 876 SUPERFAMILY SSF101353 247 443 6.67E-55 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 Hamap MF_00318 Enolase [eno]. 8 415 42.65 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 SUPERFAMILY SSF51604 146 423 3.82E-116 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 SMART SM01193 10 140 2.5E-82 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 Gene3D G3DSA:3.30.390.10 7 132 1.8E-50 T 11-10-2018 IPR029017 Enolase-like, N-terminal APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 148 421 1.4E-112 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 Pfam PF03952 Enolase, N-terminal domain 10 140 1.1E-54 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PIRSF PIRSF001400 6 428 4.8E-180 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 SMART SM01192 145 429 6.0E-187 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 Gene3D G3DSA:3.20.20.120 135 427 7.0E-125 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 367 384 3.9E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 338 352 3.9E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 43 57 3.9E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 315 326 3.9E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 167 180 3.9E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 PRINTS PR00148 Enolase signature 113 129 3.9E-42 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0695 d618def85a108c2a0abd7e696e0c02d8 429 SUPERFAMILY SSF54826 9 143 1.15E-51 T 11-10-2018 APH_0389 371ed813552f6961bae98c93df1f721c 496 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 280 7.8E-61 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0389 371ed813552f6961bae98c93df1f721c 496 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 493 44.603 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0389 371ed813552f6961bae98c93df1f721c 496 Pfam PF01676 Metalloenzyme superfamily 5 481 1.0E-68 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APH_0389 371ed813552f6961bae98c93df1f721c 496 SUPERFAMILY SSF53649 5 492 1.44E-66 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 APH_0389 371ed813552f6961bae98c93df1f721c 496 Gene3D G3DSA:3.40.720.10 6 490 4.3E-187 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 APH_0389 371ed813552f6961bae98c93df1f721c 496 PIRSF PIRSF001492 1 495 1.3E-189 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0389 371ed813552f6961bae98c93df1f721c 496 Gene3D G3DSA:3.40.1450.10 77 293 4.3E-187 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0389 371ed813552f6961bae98c93df1f721c 496 SUPERFAMILY SSF64158 77 291 9.42E-68 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.930.10 486 684 2.6E-46 T 11-10-2018 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF03484 tRNA synthetase B5 domain 403 468 1.8E-16 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF01588 Putative tRNA binding domain 44 129 8.5E-18 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SMART SM00873 210 383 1.3E-61 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 782 35.061 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.56.10 398 471 8.1E-19 T 11-10-2018 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF46955 401 472 1.28E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF54991 696 788 1.31E-19 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.56.10 5 181 1.1E-48 T 11-10-2018 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 788 4.1E-19 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.50.40.10 211 391 3.9E-54 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF56037 216 396 2.04E-53 T 11-10-2018 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:3.30.70.380 698 788 4.2E-20 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Pfam PF03483 B3/4 domain 215 383 8.2E-52 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SMART SM00874 399 468 7.6E-23 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF55681 464 681 6.46E-41 T 11-10-2018 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 Gene3D G3DSA:2.40.50.140 38 154 1.1E-48 T 11-10-2018 APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SUPERFAMILY SSF50249 43 193 3.43E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0305 ddba1cc6882ebc48a5ea2893cb7b6cfe 792 SMART SM00896 697 788 9.3E-29 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 SUPERFAMILY SSF81935 10 178 5.49E-59 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 825 836 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 Pfam PF01619 Proline dehydrogenase 192 478 7.1E-80 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 65 176 1.9E-40 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 SUPERFAMILY SSF51730 180 521 1.06E-100 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 SUPERFAMILY SSF53720 529 1029 1.96E-131 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 Gene3D G3DSA:3.20.20.220 132 514 9.7E-119 T 11-10-2018 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 Gene3D G3DSA:3.40.309.10 800 993 8.4E-150 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 Gene3D G3DSA:3.40.605.10 537 1026 8.4E-150 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 Pfam PF00171 Aldehyde dehydrogenase family 567 1026 2.0E-118 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 APH_0669 be83b0ef968e66430a49a4f5dd0c408e 1045 PIRSF PIRSF000197 2 1040 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 APH_0537 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.20.1580.10 701 838 1.4E-130 T 11-10-2018 APH_0537 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.40.50.300 622 945 1.4E-130 T 11-10-2018 APH_0537 80a7878167423ae774ce237c7bf0f593 954 ProSitePatterns PS00211 ABC transporters family signature. 838 852 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0537 80a7878167423ae774ce237c7bf0f593 954 SUPERFAMILY SSF52540 6 580 4.1E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0537 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.40.50.300 8 606 2.4E-210 T 11-10-2018 APH_0537 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.20.1580.10 92 503 2.4E-210 T 11-10-2018 APH_0537 80a7878167423ae774ce237c7bf0f593 954 SUPERFAMILY SSF52540 622 921 1.12E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0537 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:1.10.8.280 298 412 2.4E-210 T 11-10-2018 APH_0537 80a7878167423ae774ce237c7bf0f593 954 Gene3D G3DSA:3.30.190.20 132 248 2.4E-210 T 11-10-2018 APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 Gene3D G3DSA:3.30.1490.20 115 183 2.8E-22 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 Gene3D G3DSA:3.40.50.20 2 114 1.2E-31 T 11-10-2018 APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 SUPERFAMILY SSF52440 11 107 2.73E-20 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 Pfam PF02222 ATP-grasp domain 119 288 1.0E-52 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 SUPERFAMILY SSF51246 312 356 8.63E-10 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 Gene3D G3DSA:3.30.470.20 184 358 1.7E-59 T 11-10-2018 APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 SUPERFAMILY SSF56059 110 305 7.42E-57 T 11-10-2018 APH_1119 cbef2192fe87f14f40f1bb222ebb7505 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 358 36.183 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APH_0553 9c0e86419d84676bc31772971e6c4447 1628 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 116 1618 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 APH_0553 9c0e86419d84676bc31772971e6c4447 1628 PIRSF PIRSF036761 37 1624 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 APH_0553 9c0e86419d84676bc31772971e6c4447 1628 SUPERFAMILY SSF51735 946 1285 3.68E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0553 9c0e86419d84676bc31772971e6c4447 1628 SUPERFAMILY SSF53223 760 957 2.11E-25 T 11-10-2018 APH_1316 1366c6536f55a0d801922aadd123099b 342 Pfam PF08242 Methyltransferase domain 180 276 5.8E-14 T 11-10-2018 IPR013217 Methyltransferase type 12 APH_1316 1366c6536f55a0d801922aadd123099b 342 SUPERFAMILY SSF53335 132 318 3.32E-26 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_1316 1366c6536f55a0d801922aadd123099b 342 Gene3D G3DSA:1.25.40.10 29 123 1.1E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_1316 1366c6536f55a0d801922aadd123099b 342 SUPERFAMILY SSF48452 46 121 8.35E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_1316 1366c6536f55a0d801922aadd123099b 342 Gene3D G3DSA:3.40.50.150 134 332 1.4E-23 T 11-10-2018 APH_1316 1366c6536f55a0d801922aadd123099b 342 Pfam PF00515 Tetratricopeptide repeat 78 111 1.4E-7 T 11-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 APH_1316 1366c6536f55a0d801922aadd123099b 342 SMART SM00028 78 111 3.3E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 APH_0109 039e1f723ddd6c2bd02c95c04ed8df7c 150 Gene3D G3DSA:3.30.420.10 1 149 4.8E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_0109 039e1f723ddd6c2bd02c95c04ed8df7c 150 Pfam PF00075 RNase H 5 143 1.0E-49 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APH_0109 039e1f723ddd6c2bd02c95c04ed8df7c 150 SUPERFAMILY SSF53098 4 145 7.46E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0109 039e1f723ddd6c2bd02c95c04ed8df7c 150 Hamap MF_00042 Ribonuclease H [rnhA]. 3 150 30.117 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 SMART SM00853 447 591 4.4E-36 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Gene3D G3DSA:2.30.42.20 449 633 9.4E-48 T 11-10-2018 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 SUPERFAMILY SSF118116 443 633 1.16E-44 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 327 1.8E-35 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 SUPERFAMILY SSF55874 3 211 3.41E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Gene3D G3DSA:3.30.1370.100 489 588 9.4E-48 T 11-10-2018 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.5E-11 T 11-10-2018 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Gene3D G3DSA:3.30.230.10 215 327 1.1E-30 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 SUPERFAMILY SSF54211 215 327 7.21E-30 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 631 24.173 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Gene3D G3DSA:3.30.565.10 1 214 5.2E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 Pfam PF08676 MutL C terminal dimerisation domain 443 589 1.1E-35 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APH_0939 afc12fbb9c74101c204785a06bd13c8c 634 SMART SM01340 208 328 6.8E-47 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 APH_0515 520cf81dad01c0275ba9581c86f48bbe 111 SUPERFAMILY SSF47413 11 81 5.63E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 APH_0515 520cf81dad01c0275ba9581c86f48bbe 111 Pfam PF13744 Helix-turn-helix domain 11 77 4.1E-16 T 11-10-2018 IPR039554 HigA2-like, helix-turn-helix domain APH_0515 520cf81dad01c0275ba9581c86f48bbe 111 Gene3D G3DSA:1.10.260.40 8 68 2.2E-17 T 11-10-2018 APH_1132 76f9220d8d769e03d631ed63d2a0f079 124 Pfam PF04956 TrbC/VIRB2 family 4 99 2.3E-16 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_0373 c16cd34616649933ac13400f140ddb6b 801 SUPERFAMILY SSF52540 411 753 1.28E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0373 c16cd34616649933ac13400f140ddb6b 801 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 193 395 1.3E-54 T 11-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 APH_0373 c16cd34616649933ac13400f140ddb6b 801 SMART SM00382 446 704 2.5E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 SUPERFAMILY SSF54752 271 327 8.11E-16 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 Gene3D G3DSA:3.40.50.300 29 270 1.2E-81 T 11-10-2018 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 ProSitePatterns PS00321 recA signature. 216 224 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 Hamap MF_00268 Protein RecA [recA]. 8 332 48.521 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 SUPERFAMILY SSF52540 7 270 4.95E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 Gene3D G3DSA:3.30.250.10 271 342 2.4E-19 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 Pfam PF00154 recA bacterial DNA recombination protein 10 271 3.7E-135 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 SMART SM00382 60 231 1.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 168 197 4.4E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 246 275 4.4E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 300 317 4.4E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 130 159 4.4E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 96 125 4.4E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1354 b3edf733febf6e97cf1be8da7b1dcdc3 354 PRINTS PR00142 RecA protein signature 213 241 4.4E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 SUPERFAMILY SSF48557 4 429 3.3E-118 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 ProSitePatterns PS00163 Fumarate lyases signature. 263 272 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Gene3D G3DSA:1.10.275.10 1 94 2.1E-26 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Gene3D G3DSA:1.20.200.10 95 350 2.8E-84 T 11-10-2018 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Gene3D G3DSA:1.10.40.30 351 428 2.2E-21 T 11-10-2018 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 SMART SM00998 351 429 6.7E-27 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 130 150 1.6E-6 T 11-10-2018 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 89 111 1.6E-6 T 11-10-2018 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 263 279 1.6E-6 T 11-10-2018 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00145 Argininosuccinate lyase family signature 218 242 1.6E-6 T 11-10-2018 APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 9.9E-25 T 11-10-2018 IPR000362 Fumarate lyase family APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 218 245 9.9E-25 T 11-10-2018 IPR000362 Fumarate lyase family APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 90 108 9.9E-25 T 11-10-2018 IPR000362 Fumarate lyase family APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 PRINTS PR00149 Fumarate lyase superfamily signature 263 279 9.9E-25 T 11-10-2018 IPR000362 Fumarate lyase family APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Pfam PF00206 Lyase 9 285 2.6E-46 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal APH_0867 0adc16c7ce433b22cc0ae5f02ebe32f7 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 428 6.6E-20 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 Pfam PF02096 60Kd inner membrane protein 361 556 3.7E-51 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 Pfam PF14849 YidC periplasmic domain 66 349 1.4E-64 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 559 18.867 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR01900 YidC translocation/secretion protein signature 512 536 7.5E-16 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR01900 YidC translocation/secretion protein signature 492 507 7.5E-16 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR01900 YidC translocation/secretion protein signature 346 362 7.5E-16 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 422 445 2.2E-18 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.2E-18 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 331 351 2.2E-18 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.2E-18 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 PRINTS PR00701 60kDa inner membrane protein signature 248 263 2.2E-18 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0540 9efc1f0722d1f9edfb0e08242645ddb0 568 Gene3D G3DSA:2.70.98.90 63 339 1.9E-26 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 SMART SM00481 6 73 2.8E-20 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 Pfam PF14579 Helix-hairpin-helix motif 789 876 7.4E-18 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 286 716 6.9E-168 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 Gene3D G3DSA:3.20.20.140 2 263 1.6E-75 T 11-10-2018 APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 Gene3D G3DSA:1.10.10.1600 425 500 1.3E-25 T 11-10-2018 APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 Pfam PF02811 PHP domain 7 168 1.6E-28 T 11-10-2018 IPR004013 PHP domain GO:0003824 APH_1003 12ed39469e1ebf894a526af6ff315fd3 1127 SUPERFAMILY SSF89550 4 257 8.44E-15 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 Gene3D G3DSA:3.40.1280.10 92 253 1.1E-48 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 Pfam PF00588 SpoU rRNA Methylase family 110 249 6.0E-38 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 SUPERFAMILY SSF55315 6 83 4.36E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 SUPERFAMILY SSF75217 92 252 4.13E-44 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 82 1.3E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 Gene3D G3DSA:3.30.1330.30 3 83 5.0E-7 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like APH_0275 715f55d3ce2a18f378971eb2cde3f22e 258 SMART SM00967 11 87 1.8E-12 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Gene3D G3DSA:1.10.730.10 30 768 1.1E-291 T 11-10-2018 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Gene3D G3DSA:3.90.740.10 231 412 1.1E-291 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Pfam PF09334 tRNA synthetases class I (M) 40 175 4.9E-20 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 SUPERFAMILY SSF52374 13 650 8.67E-136 T 11-10-2018 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Gene3D G3DSA:3.40.50.620 37 563 1.1E-291 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 13 835 20.338 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Gene3D G3DSA:3.10.20.590 777 837 2.4E-10 T 11-10-2018 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 SUPERFAMILY SSF47323 644 836 1.5E-22 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 SUPERFAMILY SSF50677 231 413 4.29E-41 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 226 401 6.8E-52 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 219 238 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 554 564 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 521 543 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 3.0E-44 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Pfam PF08264 Anticodon-binding domain of tRNA 678 787 2.3E-14 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 415 569 4.4E-12 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 597 640 1.6E-9 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0534 d356e77873c7a34a93ba7af816f2354d 837 Gene3D G3DSA:3.10.330.110 564 610 1.1E-291 T 11-10-2018 APH_0314 47d260cde499aaff4826003d74c3fed1 394 Pfam PF01702 Queuine tRNA-ribosyltransferase 151 392 1.8E-75 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APH_0314 47d260cde499aaff4826003d74c3fed1 394 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 7 394 44.757 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APH_0314 47d260cde499aaff4826003d74c3fed1 394 SUPERFAMILY SSF51713 7 391 2.49E-126 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APH_0314 47d260cde499aaff4826003d74c3fed1 394 Gene3D G3DSA:3.20.20.105 2 394 1.2E-148 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 APH_0716 ca51fa5c526372296e36addc1025c22e 793 SMART SM00387 30 175 2.1E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0716 ca51fa5c526372296e36addc1025c22e 793 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0716 ca51fa5c526372296e36addc1025c22e 793 SMART SM00433 34 786 3.1E-229 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0716 ca51fa5c526372296e36addc1025c22e 793 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 793 87.421 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF56719 405 784 2.88E-77 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 367 381 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 226 248 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 762 778 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 477 486 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 195 208 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 4 14 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 319 335 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 180 195 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 381 401 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 249 267 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR01159 DNA gyrase subunit B signature 746 758 2.1E-58 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.30.230.10 225 404 1.6E-63 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0716 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.40.50.670 708 792 1.8E-22 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0716 ca51fa5c526372296e36addc1025c22e 793 Pfam PF01751 Toprim domain 426 537 7.4E-17 T 11-10-2018 IPR006171 TOPRIM domain APH_0716 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.40.50.670 405 614 6.4E-69 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0716 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF55874 4 210 3.97E-68 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0716 ca51fa5c526372296e36addc1025c22e 793 Gene3D G3DSA:3.30.565.10 1 217 1.2E-85 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 275 288 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 494 510 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 512 529 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 725 741 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 427 441 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 69 82 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 112 126 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 34 49 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 PRINTS PR00418 DNA topoisomerase II family signature 532 544 7.1E-69 T 11-10-2018 APH_0716 ca51fa5c526372296e36addc1025c22e 793 SUPERFAMILY SSF54211 227 398 5.88E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0716 ca51fa5c526372296e36addc1025c22e 793 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 721 782 2.2E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APH_0716 ca51fa5c526372296e36addc1025c22e 793 Pfam PF00204 DNA gyrase B 227 397 9.4E-53 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 APH_0716 ca51fa5c526372296e36addc1025c22e 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 170 1.8E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:1.10.3060.10 616 828 2.8E-47 T 11-10-2018 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 102 116 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 328 350 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 64 88 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 402 415 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 118 128 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 171 191 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 PRINTS PR00906 SecA protein signature 365 382 7.3E-66 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 827 19.319 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF02810 SEC-C motif 852 869 2.2E-9 T 11-10-2018 IPR004027 SEC-C motif APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.40.50.300 406 614 1.1E-85 T 11-10-2018 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 SMART SM00957 5 391 1.8E-279 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF07517 SecA DEAD-like domain 17 390 4.8E-126 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF52540 405 613 5.32E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 SMART SM00958 229 347 7.6E-70 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 ProSitePatterns PS01312 SecA family signature. 489 504 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF52540 20 404 3.86E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF81886 615 860 2.09E-58 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.40.50.300 22 404 3.3E-171 T 11-10-2018 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF07516 SecA Wing and Scaffold domain 612 824 9.8E-51 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Gene3D G3DSA:3.90.1440.10 230 357 3.3E-171 T 11-10-2018 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 SUPERFAMILY SSF81767 228 357 1.44E-41 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 APH_1178 b0dbbd0fd34da336585dd4e94e4b72b8 873 Pfam PF01043 SecA preprotein cross-linking domain 234 347 5.4E-36 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 APH_0283 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:4.10.950.10 196 275 1.2E-35 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0283 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:2.40.50.140 1 114 7.6E-43 T 11-10-2018 APH_0283 a32969606a53d23d2559cd5a13250d54 276 SMART SM01382 124 252 7.8E-84 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_0283 a32969606a53d23d2559cd5a13250d54 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 1.8E-54 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_0283 a32969606a53d23d2559cd5a13250d54 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0283 a32969606a53d23d2559cd5a13250d54 276 SUPERFAMILY SSF50104 126 270 4.33E-59 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily APH_0283 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:2.30.30.30 115 195 1.4E-28 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 APH_0283 a32969606a53d23d2559cd5a13250d54 276 SUPERFAMILY SSF50249 3 123 1.58E-43 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0283 a32969606a53d23d2559cd5a13250d54 276 PIRSF PIRSF002158 7 275 2.2E-102 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0283 a32969606a53d23d2559cd5a13250d54 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.3E-30 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0283 a32969606a53d23d2559cd5a13250d54 276 SMART SM01383 42 118 5.8E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0283 a32969606a53d23d2559cd5a13250d54 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 276 44.644 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APH_1022 4f3a78bcef15231d2432265fe953a431 210 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 31.723 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 APH_1022 4f3a78bcef15231d2432265fe953a431 210 Gene3D G3DSA:3.30.420.10 3 210 1.9E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_1022 4f3a78bcef15231d2432265fe953a431 210 Pfam PF01351 Ribonuclease HII 19 197 2.7E-37 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain APH_1022 4f3a78bcef15231d2432265fe953a431 210 SUPERFAMILY SSF53098 9 202 4.25E-61 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 11 107 1.4E-30 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 Gene3D G3DSA:3.30.300.10 18 275 3.6E-142 T 11-10-2018 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 Gene3D G3DSA:3.30.300.10 109 380 3.6E-142 T 11-10-2018 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 PIRSF PIRSF000497 5 389 2.8E-144 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 Gene3D G3DSA:3.30.300.10 13 238 3.6E-142 T 11-10-2018 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 378 8.2E-60 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 SUPERFAMILY SSF55973 238 384 9.81E-60 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 Pfam PF02772 S-adenosylmethionine synthetase, central domain 121 236 1.5E-31 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 SUPERFAMILY SSF55973 117 237 1.61E-37 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0007 ed429050b1cd268da1bb0972e44d6a4f 392 SUPERFAMILY SSF55973 10 117 7.85E-32 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0354 582aa77da39eebb5b4ae87c367725659 230 Pfam PF02602 Uroporphyrinogen-III synthase HemD 16 225 7.9E-32 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0354 582aa77da39eebb5b4ae87c367725659 230 Gene3D G3DSA:3.40.50.10090 1 110 2.8E-7 T 11-10-2018 APH_0354 582aa77da39eebb5b4ae87c367725659 230 Gene3D G3DSA:3.40.50.10090 111 228 4.4E-11 T 11-10-2018 APH_0354 582aa77da39eebb5b4ae87c367725659 230 SUPERFAMILY SSF69618 2 229 1.44E-35 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_1183 ca005e849f472f08777202dcb8496b8e 406 Pfam PF02491 SHS2 domain inserted in FTSA 86 159 8.0E-11 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 APH_1183 ca005e849f472f08777202dcb8496b8e 406 SUPERFAMILY SSF53067 195 371 1.68E-33 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.90.640.10 232 296 1.7E-81 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 SMART SM00842 8 193 1.5E-59 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 APH_1183 ca005e849f472f08777202dcb8496b8e 406 SUPERFAMILY SSF53067 7 194 9.23E-36 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 404 21.281 T 11-10-2018 IPR020823 Cell division protein FtsA APH_1183 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.30.1490.110 85 166 1.7E-81 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.30.420.40 11 364 1.7E-81 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 Pfam PF14450 Cell division protein FtsA 205 368 9.6E-18 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 Gene3D G3DSA:3.30.420.40 194 345 1.7E-81 T 11-10-2018 APH_1183 ca005e849f472f08777202dcb8496b8e 406 PIRSF PIRSF003101 1 403 4.6E-96 T 11-10-2018 IPR020823 Cell division protein FtsA APH_0480 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:1.10.10.200 1 81 9.6E-30 T 11-10-2018 IPR017856 Integrase-like, N-terminal APH_0480 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.70.980 133 210 2.1E-40 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0480 6f33547ea1b027a3da68af7b685d8f19 245 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 245 29.554 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0480 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.70.980 84 239 2.1E-40 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0480 6f33547ea1b027a3da68af7b685d8f19 245 SUPERFAMILY SSF75625 3 244 4.71E-74 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0480 6f33547ea1b027a3da68af7b685d8f19 245 Pfam PF01709 Transcriptional regulator 5 239 5.9E-78 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0079 2390288cfb55fdd8e0ed55a1785fc849 75 SUPERFAMILY SSF116842 8 67 5.75E-17 T 11-10-2018 APH_0079 2390288cfb55fdd8e0ed55a1785fc849 75 Pfam PF02609 Exonuclease VII small subunit 9 59 3.4E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_0079 2390288cfb55fdd8e0ed55a1785fc849 75 Gene3D G3DSA:1.10.287.1040 4 75 1.1E-18 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 APH_0079 2390288cfb55fdd8e0ed55a1785fc849 75 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 47 1.0E-10 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_0079 2390288cfb55fdd8e0ed55a1785fc849 75 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 13.632 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_0079 2390288cfb55fdd8e0ed55a1785fc849 75 PIRSF PIRSF006488 1 75 1.4E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APH_0284 c1f27f096717d857ae3899141efd06a8 94 PIRSF PIRSF002144 1 93 1.3E-27 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 90 20.768 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 Gene3D G3DSA:3.30.860.10 1 93 1.8E-30 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 SUPERFAMILY SSF54570 2 85 2.62E-26 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 ProSitePatterns PS00323 Ribosomal protein S19 signature. 54 78 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 66 81 1.4E-15 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 34 53 1.4E-15 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 54 66 1.4E-15 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0284 c1f27f096717d857ae3899141efd06a8 94 Pfam PF00203 Ribosomal protein S19 3 84 6.5E-27 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0290 3ec739cae251f553c41c720362e64c15 119 ProSitePatterns PS00049 Ribosomal protein L14 signature. 58 84 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0290 3ec739cae251f553c41c720362e64c15 119 Pfam PF00238 Ribosomal protein L14p/L23e 1 119 1.7E-41 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_0290 3ec739cae251f553c41c720362e64c15 119 SUPERFAMILY SSF50193 1 118 1.11E-40 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0290 3ec739cae251f553c41c720362e64c15 119 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 119 24.042 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_0290 3ec739cae251f553c41c720362e64c15 119 SMART SM01374 1 119 1.6E-58 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APH_0290 3ec739cae251f553c41c720362e64c15 119 Gene3D G3DSA:2.40.150.20 1 119 2.7E-41 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 Pfam PF00849 RNA pseudouridylate synthase 84 228 4.2E-32 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 Gene3D G3DSA:3.30.2350.10 75 287 1.8E-53 T 11-10-2018 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 SUPERFAMILY SSF55174 1 99 2.41E-5 T 11-10-2018 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 SMART SM00363 1 64 0.0011 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 122 136 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 SUPERFAMILY SSF55120 72 283 2.88E-50 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0549 0a489d45f0a763c8a75a310341ecd0db 297 Gene3D G3DSA:3.10.290.10 1 54 3.7E-8 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.7E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.7E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.7E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.7E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-44 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 Gene3D G3DSA:3.40.50.720 1 244 6.4E-79 T 11-10-2018 APH_0668 03a79af4f0787409809f80fef15f4f6c 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 6.7E-63 T 11-10-2018 APH_0668 03a79af4f0787409809f80fef15f4f6c 245 SUPERFAMILY SSF51735 5 244 3.36E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0668 03a79af4f0787409809f80fef15f4f6c 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 5.6E-5 T 11-10-2018 APH_0668 03a79af4f0787409809f80fef15f4f6c 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APH_1150 a14709fe64eb3f767e9f5fbe1afd368b 183 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 173 1.8E-53 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1150 a14709fe64eb3f767e9f5fbe1afd368b 183 PIRSF PIRSF005413 1 183 2.0E-67 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1150 a14709fe64eb3f767e9f5fbe1afd368b 183 Gene3D G3DSA:2.60.370.10 52 183 1.7E-49 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1150 a14709fe64eb3f767e9f5fbe1afd368b 183 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 179 34.828 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1150 a14709fe64eb3f767e9f5fbe1afd368b 183 SUPERFAMILY SSF110111 58 176 8.63E-45 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 SUPERFAMILY SSF56808 2 212 1.12E-69 T 11-10-2018 IPR023674 Ribosomal protein L1-like APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 Pfam PF00687 Ribosomal protein L1p/L10e family 17 207 6.1E-44 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 Gene3D G3DSA:3.40.50.790 55 147 4.7E-74 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 PIRSF PIRSF002155 3 214 9.7E-65 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 Gene3D G3DSA:3.30.190.20 8 212 4.7E-74 T 11-10-2018 APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 215 33.406 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APH_1027 311dfe7a669664be48bbe1d4a940e86b 216 ProSitePatterns PS01199 Ribosomal protein L1 signature. 109 127 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 Gene3D G3DSA:3.30.300.10 7 224 1.4E-118 T 11-10-2018 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 213 221 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 71 81 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 SUPERFAMILY SSF55973 187 333 5.3E-60 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 Pfam PF02772 S-adenosylmethionine synthetase, central domain 70 185 1.1E-31 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 Gene3D G3DSA:3.30.300.10 92 187 1.4E-118 T 11-10-2018 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 Gene3D G3DSA:3.30.300.10 58 329 1.4E-118 T 11-10-2018 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 187 327 6.1E-60 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 SUPERFAMILY SSF55973 66 186 1.22E-37 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 SUPERFAMILY SSF55973 7 66 3.37E-8 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0058 21c7af065822f5d7c21a3fe57cd38f08 341 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 56 1.6E-6 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 APH_0074 fe23be79c4838fc3b4d83eac4c83032c 393 Gene3D G3DSA:1.10.4030.30 25 263 2.0E-16 T 11-10-2018 APH_0074 fe23be79c4838fc3b4d83eac4c83032c 393 SUPERFAMILY SSF109998 26 179 2.9E-18 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily APH_0074 fe23be79c4838fc3b4d83eac4c83032c 393 Gene3D G3DSA:3.10.50.40 165 255 2.0E-16 T 11-10-2018 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 SUPERFAMILY SSF51735 2 179 3.82E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PIRSF PIRSF000114 1 323 2.5E-85 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 SUPERFAMILY SSF48179 178 322 2.04E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 159 2.1E-40 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 6.4E-32 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 6.4E-32 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 6.4E-32 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 6.4E-32 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 6.4E-32 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 6.4E-32 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 318 4.5E-35 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 Gene3D G3DSA:3.40.50.720 1 186 1.3E-51 T 11-10-2018 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 320 29.495 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 APH_0198 eb0cb68afa6a8e310db145b60af472dc 324 Gene3D G3DSA:1.10.1040.10 188 324 6.3E-34 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:3.40.50.300 454 667 5.3E-73 T 11-10-2018 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.8.60 365 451 1.3E-27 T 11-10-2018 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF52540 455 742 9.92E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 505 523 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 623 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 547 565 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 576 594 2.5E-33 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.1780.10 1 140 4.2E-25 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF52540 183 427 3.25E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM00382 501 637 1.6E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM00382 220 366 1.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 339 2.2E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 532 550 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF81923 2 140 1.07E-39 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 669 749 4.1E-14 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.8.60 669 771 1.0E-17 T 11-10-2018 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:3.40.50.300 170 364 4.1E-58 T 11-10-2018 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF07724 AAA domain (Cdc48 subfamily) 501 663 6.0E-42 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_0450 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM01086 669 760 2.2E-17 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Gene3D G3DSA:1.10.287.40 1 103 4.7E-19 T 11-10-2018 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 6.1E-34 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PIRSF PIRSF001529 1 423 8.7E-153 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Gene3D G3DSA:3.30.930.10 104 425 1.2E-107 T 11-10-2018 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 36.874 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 SUPERFAMILY SSF46589 1 111 3.14E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 9.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 9.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 9.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 9.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 9.3E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 2.7E-19 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 APH_0427 2ba3e4d52b3d3e6c0cba9fa205e3a0a2 428 SUPERFAMILY SSF55681 115 423 9.67E-86 T 11-10-2018 APH_1287 604e656f207d06d9c4247fc262e3b6f7 422 Pfam PF01617 Surface antigen 27 422 5.9E-83 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1287 604e656f207d06d9c4247fc262e3b6f7 422 SUPERFAMILY SSF56925 27 422 1.46E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1287 604e656f207d06d9c4247fc262e3b6f7 422 Gene3D G3DSA:2.40.160.20 198 384 1.7E-9 T 11-10-2018 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 315 1.1E-26 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 PIRSF PIRSF000102 3 321 1.2E-101 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 SUPERFAMILY SSF56327 148 316 1.73E-50 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 SUPERFAMILY SSF51735 7 148 1.65E-45 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 318 41.471 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 Gene3D G3DSA:3.90.110.10 151 320 1.3E-54 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 8.5E-38 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 Gene3D G3DSA:3.40.50.720 2 149 1.5E-48 T 11-10-2018 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 5.2E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 5.2E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 5.2E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 5.2E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_0629 d6f2cfca2c2c4ddbef8650129993fd9b 321 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 5.2E-28 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 Gene3D G3DSA:1.10.1900.20 56 118 2.5E-24 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 Gene3D G3DSA:1.10.720.90 2 55 3.5E-22 T 11-10-2018 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 SUPERFAMILY SSF74731 3 115 9.16E-45 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 69 3.0E-8 T 11-10-2018 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.238 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.1E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.1E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.1E-34 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 Pfam PF00453 Ribosomal protein L20 3 109 8.8E-45 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0060 975c6b7042e5cdc17899b2216bf3239c 128 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0196 240716b4f3190e10d8e1691962e35a88 462 Pfam PF02954 Bacterial regulatory protein, Fis family 417 455 3.3E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APH_0196 240716b4f3190e10d8e1691962e35a88 462 Gene3D G3DSA:3.40.50.2300 11 130 1.3E-33 T 11-10-2018 APH_0196 240716b4f3190e10d8e1691962e35a88 462 SMART SM00448 10 123 1.4E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0196 240716b4f3190e10d8e1691962e35a88 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 362 371 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site APH_0196 240716b4f3190e10d8e1691962e35a88 462 SMART SM00382 168 313 1.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0196 240716b4f3190e10d8e1691962e35a88 462 Gene3D G3DSA:3.40.50.300 134 320 2.6E-39 T 11-10-2018 APH_0196 240716b4f3190e10d8e1691962e35a88 462 SUPERFAMILY SSF52540 147 393 5.61E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0196 240716b4f3190e10d8e1691962e35a88 462 Gene3D G3DSA:1.10.10.60 406 460 1.0E-14 T 11-10-2018 APH_0196 240716b4f3190e10d8e1691962e35a88 462 Gene3D G3DSA:1.10.8.60 322 400 2.5E-16 T 11-10-2018 APH_0196 240716b4f3190e10d8e1691962e35a88 462 SUPERFAMILY SSF46689 362 459 3.45E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 APH_0196 240716b4f3190e10d8e1691962e35a88 462 SUPERFAMILY SSF52172 11 191 1.85E-40 T 11-10-2018 IPR011006 CheY-like superfamily APH_0196 240716b4f3190e10d8e1691962e35a88 462 Pfam PF00072 Response regulator receiver domain 12 123 5.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0196 240716b4f3190e10d8e1691962e35a88 462 Pfam PF00158 Sigma-54 interaction domain 148 315 1.0E-34 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 SUPERFAMILY SSF53623 12 284 2.52E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 SUPERFAMILY SSF53244 303 427 8.47E-20 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 Gene3D G3DSA:3.40.1190.10 6 285 1.2E-87 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 PIRSF PIRSF001563 5 428 9.0E-116 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 41 64 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 133 148 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 Pfam PF08245 Mur ligase middle domain 43 259 2.5E-10 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 APH_0747 20782d8f1e6dd0f93f039d494d9b8339 429 Gene3D G3DSA:3.90.190.20 297 428 3.6E-21 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 APH_0235 3f2551831983d9fe150b66ed70145319 859 SUPERFAMILY SSF52540 162 524 8.65E-96 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0235 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:1.10.8.60 766 859 6.9E-23 T 11-10-2018 APH_0235 3f2551831983d9fe150b66ed70145319 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 207 339 1.4E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 SUPERFAMILY SSF81923 4 158 9.42E-34 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 APH_0235 3f2551831983d9fe150b66ed70145319 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.1E-50 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 SMART SM01086 766 855 8.1E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_0235 3f2551831983d9fe150b66ed70145319 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 147 3.0E-7 T 11-10-2018 IPR004176 Clp, N-terminal APH_0235 3f2551831983d9fe150b66ed70145319 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 2.0E-6 T 11-10-2018 IPR004176 Clp, N-terminal APH_0235 3f2551831983d9fe150b66ed70145319 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:3.40.50.300 150 345 1.3E-68 T 11-10-2018 APH_0235 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:3.40.50.300 549 765 2.5E-81 T 11-10-2018 APH_0235 3f2551831983d9fe150b66ed70145319 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 2.2E-20 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_0235 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:3.40.50.300 346 544 7.9E-68 T 11-10-2018 APH_0235 3f2551831983d9fe150b66ed70145319 859 Gene3D G3DSA:1.10.1780.10 2 149 4.6E-28 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 APH_0235 3f2551831983d9fe150b66ed70145319 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 APH_0235 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.5E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.5E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.5E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.5E-39 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 APH_0235 3f2551831983d9fe150b66ed70145319 859 SMART SM00382 597 748 6.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0235 3f2551831983d9fe150b66ed70145319 859 SMART SM00382 201 347 7.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0235 3f2551831983d9fe150b66ed70145319 859 SUPERFAMILY SSF52540 547 851 5.48E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0332 5d6c573c60c43b3540ae59f96ebe21bd 166 Gene3D G3DSA:3.30.420.140 16 159 5.3E-38 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 APH_0332 5d6c573c60c43b3540ae59f96ebe21bd 166 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 20.252 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APH_0332 5d6c573c60c43b3540ae59f96ebe21bd 166 Pfam PF03652 Holliday junction resolvase 18 149 7.5E-36 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APH_0332 5d6c573c60c43b3540ae59f96ebe21bd 166 SUPERFAMILY SSF53098 17 149 4.7E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0332 5d6c573c60c43b3540ae59f96ebe21bd 166 SMART SM00732 17 117 1.9E-23 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 APH_1096 0500a001fcda6b99629f8734e647a1d5 94 Gene3D G3DSA:3.10.310.40 9 87 1.4E-8 T 11-10-2018 APH_0554 6257de4e8a43238d46c6d12b548db5b6 242 PIRSF PIRSF033239 27 233 3.9E-69 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD APH_0554 6257de4e8a43238d46c6d12b548db5b6 242 Pfam PF06055 Exopolysaccharide synthesis, ExoD 41 218 2.3E-55 T 11-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD APH_0780 0f1ce5a76cad5a74985931abe4692d29 224 SUPERFAMILY SSF52540 1 192 1.05E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0780 0f1ce5a76cad5a74985931abe4692d29 224 Pfam PF01121 Dephospho-CoA kinase 3 179 7.8E-25 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 APH_0780 0f1ce5a76cad5a74985931abe4692d29 224 Gene3D G3DSA:3.40.50.300 1 202 1.3E-38 T 11-10-2018 APH_0780 0f1ce5a76cad5a74985931abe4692d29 224 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 17.825 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 APH_0511 6e9e638e3ed7c62085ff76e616564298 91 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 15 36 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0511 6e9e638e3ed7c62085ff76e616564298 91 SUPERFAMILY SSF143243 1 87 4.58E-35 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0511 6e9e638e3ed7c62085ff76e616564298 91 Gene3D G3DSA:3.30.460.80 1 34 5.7E-16 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0511 6e9e638e3ed7c62085ff76e616564298 91 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 1 55 3.6E-25 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0511 6e9e638e3ed7c62085ff76e616564298 91 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 1 41 2.0E-15 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1197 e7aaf2966c963b049e328b54ec2ecd2d 170 SUPERFAMILY SSF51161 7 167 1.01E-45 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily APH_1197 e7aaf2966c963b049e328b54ec2ecd2d 170 Gene3D G3DSA:2.160.10.10 4 170 3.3E-57 T 11-10-2018 APH_1197 e7aaf2966c963b049e328b54ec2ecd2d 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 125 0.0027 T 11-10-2018 IPR001451 Hexapeptide repeat APH_1197 e7aaf2966c963b049e328b54ec2ecd2d 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 47 1.9E-4 T 11-10-2018 IPR001451 Hexapeptide repeat APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF55326 4 167 1.11E-44 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 344 41.598 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF56042 174 342 1.79E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 341 1.2E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 162 1.7E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.90.650.10 169 344 5.7E-67 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0202 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.30.1330.10 1 168 2.9E-61 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF55326 4 167 1.11E-44 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 344 41.598 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 SUPERFAMILY SSF56042 174 342 1.79E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 341 1.2E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 162 1.7E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.90.650.10 169 344 5.7E-67 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0210 e17b56fcdbeb9f9a25e3006b30a60662 344 Gene3D G3DSA:3.30.1330.10 1 168 2.9E-61 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0294 cdb7dfe43d3f9d78e21145f87ffcc46a 133 SUPERFAMILY SSF56047 3 133 1.44E-39 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0294 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Gene3D G3DSA:3.30.1490.10 80 133 6.7E-21 T 11-10-2018 APH_0294 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Pfam PF00410 Ribosomal protein S8 5 133 4.6E-42 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0294 cdb7dfe43d3f9d78e21145f87ffcc46a 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0294 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 133 28.51 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0294 cdb7dfe43d3f9d78e21145f87ffcc46a 133 Gene3D G3DSA:3.30.1370.30 4 79 1.4E-20 T 11-10-2018 APH_0179 229403fb9c8aae0e91af3f2b2958ae14 227 Gene3D G3DSA:3.40.50.1820 1 220 6.1E-49 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0179 229403fb9c8aae0e91af3f2b2958ae14 227 Pfam PF00561 alpha/beta hydrolase fold 2 116 6.6E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0179 229403fb9c8aae0e91af3f2b2958ae14 227 SUPERFAMILY SSF53474 3 207 1.67E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0179 229403fb9c8aae0e91af3f2b2958ae14 227 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 2.6E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0179 229403fb9c8aae0e91af3f2b2958ae14 227 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 86 2.6E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0179 229403fb9c8aae0e91af3f2b2958ae14 227 PRINTS PR00111 Alpha/beta hydrolase fold signature 29 44 2.6E-5 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 Gene3D G3DSA:1.10.287.80 102 178 9.3E-28 T 11-10-2018 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 SUPERFAMILY SSF52943 30 182 2.09E-30 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 Gene3D G3DSA:3.40.1380.10 43 101 9.3E-28 T 11-10-2018 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 PRINTS PR00126 ATP synthase gamma subunit signature 129 148 7.1E-15 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 PRINTS PR00126 ATP synthase gamma subunit signature 56 73 7.1E-15 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 PRINTS PR00126 ATP synthase gamma subunit signature 160 181 7.1E-15 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0813 a8a0843ee0a5cf387615118303002fb4 183 Pfam PF00231 ATP synthase 33 182 1.9E-28 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0075 985442dac53d18139d05951a071ac9c5 182 Gene3D G3DSA:3.40.50.150 1 182 2.0E-44 T 11-10-2018 APH_0075 985442dac53d18139d05951a071ac9c5 182 Pfam PF03602 Conserved hypothetical protein 95 2 180 1.3E-38 T 11-10-2018 APH_0075 985442dac53d18139d05951a071ac9c5 182 SUPERFAMILY SSF53335 2 180 8.93E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0075 985442dac53d18139d05951a071ac9c5 182 PIRSF PIRSF004553 1 182 4.8E-49 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 5 326 9.1E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF55424 350 466 2.41E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.30.390.30 352 471 4.6E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 1.2E-60 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 148 269 9.1E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF51905 1 336 3.79E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-37 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 7.3E-37 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 7.3E-37 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.3E-37 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.3E-37 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 2.2E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PIRSF PIRSF000350 1 466 1.2E-74 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 5.5E-67 T 11-10-2018 APH_1070 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 5 326 9.1E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF55424 350 466 2.41E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.30.390.30 352 471 4.6E-37 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 1.2E-60 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 Gene3D G3DSA:3.50.50.60 148 269 9.1E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 SUPERFAMILY SSF51905 1 336 3.79E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-37 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 7.3E-37 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 7.3E-37 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.3E-37 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.3E-37 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 2.2E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PIRSF PIRSF000350 1 466 1.2E-74 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 5.5E-67 T 11-10-2018 APH_0065 b463bf3f6c1a15a4365e2d02ce03832e 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 5.5E-67 T 11-10-2018 APH_0547 97545f35ab08ac10f565657add754315 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 1.5E-16 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 APH_0547 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50104 6 63 8.42E-16 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily APH_0547 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.30.30.30 5 63 7.0E-19 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 APH_0547 97545f35ab08ac10f565657add754315 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.3E-20 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 APH_0547 97545f35ab08ac10f565657add754315 188 PIRSF PIRSF005901 1 187 3.4E-61 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP APH_0547 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50249 129 186 6.17E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0547 97545f35ab08ac10f565657add754315 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 39.834 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 APH_0547 97545f35ab08ac10f565657add754315 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site APH_0547 97545f35ab08ac10f565657add754315 188 SMART SM00841 130 185 1.3E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 APH_0547 97545f35ab08ac10f565657add754315 188 SMART SM01185 68 122 1.1E-18 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 APH_0547 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.40.50.140 65 128 4.7E-17 T 11-10-2018 APH_0547 97545f35ab08ac10f565657add754315 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 58 1.2E-20 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like APH_0547 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.40.50.140 129 187 1.0E-19 T 11-10-2018 APH_0547 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50249 66 127 9.42E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0514 d5bf2d18add87a0d04d831673dac4e82 135 Gene3D G3DSA:3.90.940.10 10 78 1.3E-13 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 APH_0514 d5bf2d18add87a0d04d831673dac4e82 135 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 12.927 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0514 d5bf2d18add87a0d04d831673dac4e82 135 Pfam PF01192 RNA polymerase Rpb6 14 59 4.8E-9 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 APH_0514 d5bf2d18add87a0d04d831673dac4e82 135 SUPERFAMILY SSF63562 14 73 1.71E-13 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 APH_0514 d5bf2d18add87a0d04d831673dac4e82 135 SMART SM01409 7 60 7.3E-10 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 APH_0323 e67259c6c674a88eeb7ea0f0303bdcc0 485 SUPERFAMILY SSF48024 19 129 4.18E-24 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 APH_0323 e67259c6c674a88eeb7ea0f0303bdcc0 485 Pfam PF03796 DnaB-like helicase C terminal domain 198 474 1.5E-96 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 APH_0323 e67259c6c674a88eeb7ea0f0303bdcc0 485 Pfam PF00772 DnaB-like helicase N terminal domain 20 119 1.9E-20 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APH_0323 e67259c6c674a88eeb7ea0f0303bdcc0 485 Gene3D G3DSA:3.40.50.300 177 475 9.6E-96 T 11-10-2018 APH_0323 e67259c6c674a88eeb7ea0f0303bdcc0 485 SUPERFAMILY SSF52540 197 468 6.58E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0323 e67259c6c674a88eeb7ea0f0303bdcc0 485 Gene3D G3DSA:1.10.860.10 15 176 2.8E-28 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APH_0698 6435104682b134b10ab2753e65a55a26 91 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0698 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0698 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0698 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-34 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0698 6435104682b134b10ab2753e65a55a26 91 SUPERFAMILY SSF110324 2 82 6.88E-32 T 11-10-2018 APH_0698 6435104682b134b10ab2753e65a55a26 91 Pfam PF01016 Ribosomal L27 protein 2 81 1.1E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0698 6435104682b134b10ab2753e65a55a26 91 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 25.622 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0698 6435104682b134b10ab2753e65a55a26 91 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 83 2.0E-16 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0698 6435104682b134b10ab2753e65a55a26 91 Gene3D G3DSA:2.40.50.100 21 90 4.2E-29 T 11-10-2018 APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 Pfam PF00677 Lumazine binding domain 102 186 1.2E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 Pfam PF00677 Lumazine binding domain 4 87 2.4E-15 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 SUPERFAMILY SSF63380 1 91 3.57E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 Gene3D G3DSA:2.40.30.20 1 90 4.4E-22 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 PIRSF PIRSF000498 1 202 5.3E-64 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 SUPERFAMILY SSF63380 96 198 3.57E-31 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel APH_0106 c0015e7c5bf36796c914c12c0bcbfa1c 203 Gene3D G3DSA:2.40.30.20 104 202 1.7E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:3.30.420.40 20 366 5.5E-91 T 11-10-2018 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 460 476 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 17 30 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 380 399 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 354 374 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 45 57 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 323 339 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 141 161 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 PRINTS PR00301 70kDa heat shock protein signature 200 210 9.0E-41 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 SUPERFAMILY SSF100920 378 528 9.68E-40 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 SUPERFAMILY SSF53067 18 186 2.16E-42 T 11-10-2018 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 Pfam PF00012 Hsp70 protein 19 541 6.7E-131 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:3.90.640.10 226 298 5.5E-91 T 11-10-2018 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:2.60.34.10 376 544 2.4E-47 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 Gene3D G3DSA:3.30.420.40 187 356 5.5E-91 T 11-10-2018 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 SUPERFAMILY SSF53067 189 371 4.1E-41 T 11-10-2018 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 194 207 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APH_0678 95f656d25ce7859bf390d1ef04c1c46f 592 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 21 28 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APH_0135 0c8caedbd4aef29308a54cbce4417a15 89 Pfam PF00313 'Cold-shock' DNA-binding domain 12 32 7.0E-6 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APH_0135 0c8caedbd4aef29308a54cbce4417a15 89 Pfam PF00313 'Cold-shock' DNA-binding domain 42 85 2.7E-10 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APH_0135 0c8caedbd4aef29308a54cbce4417a15 89 PIRSF PIRSF002599 7 89 5.5E-17 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 APH_0135 0c8caedbd4aef29308a54cbce4417a15 89 SMART SM00357 12 87 5.9E-16 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 APH_0135 0c8caedbd4aef29308a54cbce4417a15 89 Gene3D G3DSA:2.40.50.140 9 86 4.7E-22 T 11-10-2018 APH_0135 0c8caedbd4aef29308a54cbce4417a15 89 SUPERFAMILY SSF50249 10 86 6.37E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0286 8abec3e6627409e32079c37b0c9530c3 211 Pfam PF07650 KH domain 38 109 3.0E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 Gene3D G3DSA:3.30.1140.32 107 206 3.0E-43 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.9E-38 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 SUPERFAMILY SSF54814 2 105 2.25E-32 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 36.915 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 SUPERFAMILY SSF54821 106 205 9.29E-39 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 Gene3D G3DSA:3.30.300.20 17 106 1.4E-25 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta APH_0286 8abec3e6627409e32079c37b0c9530c3 211 SMART SM00322 59 124 2.1E-4 T 11-10-2018 IPR004087 K Homology domain GO:0003676 APH_0286 8abec3e6627409e32079c37b0c9530c3 211 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0659 d09bb7cafc5f91e0a29663bc92968ea1 203 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 162 196 1.0E-9 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0659 d09bb7cafc5f91e0a29663bc92968ea1 203 PIRSF PIRSF000239 2 202 7.1E-56 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0659 d09bb7cafc5f91e0a29663bc92968ea1 203 Pfam PF00578 AhpC/TSA family 9 141 1.2E-28 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0659 d09bb7cafc5f91e0a29663bc92968ea1 203 SUPERFAMILY SSF52833 5 196 9.44E-57 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0659 d09bb7cafc5f91e0a29663bc92968ea1 203 Gene3D G3DSA:3.40.30.10 5 199 5.7E-67 T 11-10-2018 APH_0697 f36ff734a735ac61e782c08b9db5541f 99 ProSitePatterns PS01169 Ribosomal protein L21 signature. 69 91 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0697 f36ff734a735ac61e782c08b9db5541f 99 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 5.1E-32 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0697 f36ff734a735ac61e782c08b9db5541f 99 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 20.561 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0697 f36ff734a735ac61e782c08b9db5541f 99 SUPERFAMILY SSF141091 1 98 6.02E-30 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0236 e2f040906fde35cab0cf70e147d35226 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APH_0236 e2f040906fde35cab0cf70e147d35226 248 Gene3D G3DSA:3.40.50.720 2 245 1.1E-58 T 11-10-2018 APH_0236 e2f040906fde35cab0cf70e147d35226 248 SUPERFAMILY SSF51735 5 236 4.17E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0236 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0236 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0236 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0236 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0236 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.3E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0236 e2f040906fde35cab0cf70e147d35226 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0236 e2f040906fde35cab0cf70e147d35226 248 Pfam PF00106 short chain dehydrogenase 9 202 8.6E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0398 562bc7333831750a4258afe49e391c09 287 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 52.833 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APH_0398 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:1.10.286.20 202 246 6.3E-34 T 11-10-2018 APH_0398 562bc7333831750a4258afe49e391c09 287 SUPERFAMILY SSF54713 57 285 5.23E-39 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 APH_0398 562bc7333831750a4258afe49e391c09 287 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APH_0398 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:3.30.479.20 149 285 6.3E-34 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 APH_0398 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:3.30.479.20 56 144 8.1E-13 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 APH_0398 562bc7333831750a4258afe49e391c09 287 Gene3D G3DSA:1.10.8.10 3 55 3.6E-22 T 11-10-2018 APH_0398 562bc7333831750a4258afe49e391c09 287 Pfam PF00889 Elongation factor TS 70 285 1.2E-50 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 APH_0398 562bc7333831750a4258afe49e391c09 287 SUPERFAMILY SSF46934 1 54 1.63E-16 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 APH_0496 2e983d03492df28a56f1c19fe027ff70 448 SUPERFAMILY SSF54631 136 266 9.85E-24 T 11-10-2018 APH_0496 2e983d03492df28a56f1c19fe027ff70 448 SMART SM00116 143 196 54.0 T 11-10-2018 IPR000644 CBS domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 SMART SM00116 207 255 7.2E-7 T 11-10-2018 IPR000644 CBS domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF00571 CBS domain 136 192 0.005 T 11-10-2018 IPR000644 CBS domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF00571 CBS domain 200 255 1.1E-6 T 11-10-2018 IPR000644 CBS domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF03448 MgtE intracellular N domain 37 134 3.3E-16 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Pfam PF01769 Divalent cation transporter 319 440 5.6E-21 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Gene3D G3DSA:1.10.357.20 272 448 3.4E-45 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 SMART SM00924 33 136 5.2E-22 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Gene3D G3DSA:1.25.60.10 5 131 4.8E-11 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily APH_0496 2e983d03492df28a56f1c19fe027ff70 448 Gene3D G3DSA:3.10.580.10 132 259 4.0E-32 T 11-10-2018 APH_0496 2e983d03492df28a56f1c19fe027ff70 448 SUPERFAMILY SSF161093 276 447 2.35E-41 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 APH_0496 2e983d03492df28a56f1c19fe027ff70 448 SUPERFAMILY SSF158791 8 133 4.84E-20 T 11-10-2018 APH_1395 51b5aaf7627fbb0bc7d3077454aece21 301 Gene3D G3DSA:1.20.1510.10 16 211 1.4E-38 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily APH_1395 51b5aaf7627fbb0bc7d3077454aece21 301 Pfam PF01545 Cation efflux family 22 211 4.3E-42 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APH_1395 51b5aaf7627fbb0bc7d3077454aece21 301 SUPERFAMILY SSF160240 225 295 1.7E-7 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 APH_1395 51b5aaf7627fbb0bc7d3077454aece21 301 SUPERFAMILY SSF161111 16 212 1.14E-48 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily APH_1276 38c21b2ee78ec1a816a27d761ebc5cac 157 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 27.832 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APH_1276 38c21b2ee78ec1a816a27d761ebc5cac 157 Pfam PF02542 YgbB family 1 153 1.9E-54 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APH_1276 38c21b2ee78ec1a816a27d761ebc5cac 157 SUPERFAMILY SSF69765 1 156 2.88E-55 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APH_1276 38c21b2ee78ec1a816a27d761ebc5cac 157 Gene3D G3DSA:3.30.1330.50 1 157 1.4E-58 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APH_1276 38c21b2ee78ec1a816a27d761ebc5cac 157 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 APH_1244 a027bfdacd376460640c58470f27768d 412 Gene3D G3DSA:3.40.50.620 1 222 5.2E-82 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1244 a027bfdacd376460640c58470f27768d 412 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 5 410 39.646 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APH_1244 a027bfdacd376460640c58470f27768d 412 SUPERFAMILY SSF55174 339 410 1.81E-10 T 11-10-2018 APH_1244 a027bfdacd376460640c58470f27768d 412 Pfam PF00579 tRNA synthetases class I (W and Y) 33 321 8.3E-70 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1244 a027bfdacd376460640c58470f27768d 412 SUPERFAMILY SSF52374 6 321 1.69E-94 T 11-10-2018 APH_1244 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 4.3E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APH_1244 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 4.3E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APH_1244 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 4.3E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APH_1244 a027bfdacd376460640c58470f27768d 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 4.3E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 APH_1244 a027bfdacd376460640c58470f27768d 412 Gene3D G3DSA:3.10.290.10 328 388 1.0E-7 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 APH_1244 a027bfdacd376460640c58470f27768d 412 Gene3D G3DSA:1.10.240.10 223 327 8.4E-31 T 11-10-2018 APH_1279 20b94787af9dacd31a728ac4dcab7bb1 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 11 164 30.939 T 11-10-2018 IPR033747 Class I PurE APH_1279 20b94787af9dacd31a728ac4dcab7bb1 165 Gene3D G3DSA:3.40.50.7700 3 164 2.1E-66 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 APH_1279 20b94787af9dacd31a728ac4dcab7bb1 165 PIRSF PIRSF001338 7 163 1.1E-64 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 APH_1279 20b94787af9dacd31a728ac4dcab7bb1 165 SMART SM01001 9 160 6.6E-92 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APH_1279 20b94787af9dacd31a728ac4dcab7bb1 165 SUPERFAMILY SSF52255 8 160 1.06E-61 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 APH_1279 20b94787af9dacd31a728ac4dcab7bb1 165 Pfam PF00731 AIR carboxylase 11 157 1.2E-60 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 Pfam PF01259 SAICAR synthetase 8 236 4.1E-59 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 ProSitePatterns PS01057 SAICAR synthetase signature 1. 88 102 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 Gene3D G3DSA:3.30.200.20 8 236 1.2E-90 T 11-10-2018 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 239 30.58 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 Gene3D G3DSA:3.30.470.20 87 225 1.2E-90 T 11-10-2018 APH_0119 4c722e999cecfa3e65d8ddd99c615dfe 244 SUPERFAMILY SSF56104 5 237 2.55E-74 T 11-10-2018 APH_1211 8a0ac113b8263d4544a57ec5d5928ec2 362 Pfam PF02163 Peptidase family M50 21 348 2.8E-68 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 APH_1211 8a0ac113b8263d4544a57ec5d5928ec2 362 Gene3D G3DSA:2.30.42.10 140 223 8.7E-15 T 11-10-2018 APH_1211 8a0ac113b8263d4544a57ec5d5928ec2 362 SMART SM00228 127 197 0.0079 T 11-10-2018 IPR001478 PDZ domain GO:0005515 APH_1211 8a0ac113b8263d4544a57ec5d5928ec2 362 SUPERFAMILY SSF50156 101 206 4.99E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 APH_1108 95721dacc69213f13de8fff03f541124 158 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 24.031 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_1108 95721dacc69213f13de8fff03f541124 158 Pfam PF00572 Ribosomal protein L13 14 138 2.9E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_1108 95721dacc69213f13de8fff03f541124 158 Gene3D G3DSA:3.90.1180.10 1 143 2.1E-54 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 APH_1108 95721dacc69213f13de8fff03f541124 158 PIRSF PIRSF002181 2 155 6.8E-45 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APH_1108 95721dacc69213f13de8fff03f541124 158 SUPERFAMILY SSF52161 1 140 3.53E-51 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 Pfam PF00035 Double-stranded RNA binding motif 165 229 1.3E-11 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain APH_1149 9137385fd8f89ad141dda79ed019fd40 236 Pfam PF14622 Ribonuclease-III-like 26 150 4.2E-30 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 Gene3D G3DSA:1.10.1520.10 12 154 1.2E-40 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 SMART SM00358 165 231 3.9E-18 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain APH_1149 9137385fd8f89ad141dda79ed019fd40 236 SUPERFAMILY SSF54768 120 231 8.01E-26 T 11-10-2018 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 Hamap MF_00104 Ribonuclease 3 [rnc]. 16 227 27.0 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 Gene3D G3DSA:3.30.160.20 163 232 1.1E-19 T 11-10-2018 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 SUPERFAMILY SSF69065 10 167 2.44E-45 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 ProSitePatterns PS00517 Ribonuclease III family signature. 48 56 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 APH_1149 9137385fd8f89ad141dda79ed019fd40 236 SMART SM00535 28 159 8.8E-43 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 APH_1049 0b829bd6d9c33dcd6713f608b3f99106 209 SUPERFAMILY SSF52833 55 191 2.28E-39 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1049 0b829bd6d9c33dcd6713f608b3f99106 209 Pfam PF02630 SCO1/SenC 54 185 3.9E-36 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1049 0b829bd6d9c33dcd6713f608b3f99106 209 Gene3D G3DSA:3.40.30.10 35 208 5.4E-44 T 11-10-2018 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 1.4E-91 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 SUPERFAMILY SSF52374 3 295 1.21E-97 T 11-10-2018 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:3.40.50.620 2 314 5.8E-117 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.0E-26 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 Gene3D G3DSA:1.10.10.350 367 468 1.6E-15 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 SUPERFAMILY SSF48163 300 462 3.01E-29 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0408 149032eef6f27f8ade70e0a7b10fcef8 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 466 27.845 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0543 a38f006282ea087c64590660a05d97d9 264 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 193 229 1.2E-9 T 11-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal APH_0543 a38f006282ea087c64590660a05d97d9 264 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 45 67 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_0543 a38f006282ea087c64590660a05d97d9 264 Gene3D G3DSA:1.20.120.1760 1 155 2.1E-15 T 11-10-2018 APH_0543 a38f006282ea087c64590660a05d97d9 264 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 67 9.9E-14 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_0139 e138be3945b774e7999534fd0ee895d9 109 SUPERFAMILY SSF52833 4 106 1.07E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0139 e138be3945b774e7999534fd0ee895d9 109 Gene3D G3DSA:3.40.30.10 8 104 2.2E-34 T 11-10-2018 APH_0139 e138be3945b774e7999534fd0ee895d9 109 PIRSF PIRSF005894 1 109 4.0E-49 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 APH_0139 e138be3945b774e7999534fd0ee895d9 109 Pfam PF00462 Glutaredoxin 18 82 6.2E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 SUPERFAMILY SSF55874 292 460 6.16E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 SMART SM00388 234 303 1.1E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 SUPERFAMILY SSF47384 220 304 1.63E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 302 4.1E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 7.7E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 Gene3D G3DSA:3.30.565.10 303 458 1.7E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 6.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 6.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 6.9E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 SMART SM00387 349 461 9.3E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0944 cc36764b79f7a93097681ddc0ceb5389 470 Gene3D G3DSA:1.10.287.130 202 301 8.5E-27 T 11-10-2018 APH_0281 c15bc64d0f275b324a05c8a928e7d569 208 SUPERFAMILY SSF52166 1 205 2.62E-69 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 APH_0281 c15bc64d0f275b324a05c8a928e7d569 208 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.8E-61 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APH_0281 c15bc64d0f275b324a05c8a928e7d569 208 Gene3D G3DSA:3.40.1370.10 1 208 3.5E-69 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 APH_0281 c15bc64d0f275b324a05c8a928e7d569 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.736 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0420 32b17c031167c44e6791cdabb5159557 359 SMART SM00937 64 179 1.1E-55 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 APH_0420 32b17c031167c44e6791cdabb5159557 359 Pfam PF03462 PCRF domain 12 204 4.1E-64 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 APH_0420 32b17c031167c44e6791cdabb5159557 359 Pfam PF00472 RF-1 domain 212 321 2.2E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_0420 32b17c031167c44e6791cdabb5159557 359 SUPERFAMILY SSF75620 11 354 1.01E-125 T 11-10-2018 APH_0420 32b17c031167c44e6791cdabb5159557 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_0420 32b17c031167c44e6791cdabb5159557 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 37.958 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APH_0420 32b17c031167c44e6791cdabb5159557 359 Gene3D G3DSA:3.30.70.1660 113 343 1.0E-94 T 11-10-2018 APH_0420 32b17c031167c44e6791cdabb5159557 359 Gene3D G3DSA:3.30.160.20 211 297 1.0E-94 T 11-10-2018 APH_0367 36469563930e2e10bcd85605de09add9 295 Gene3D G3DSA:3.20.20.70 47 258 6.9E-17 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0367 36469563930e2e10bcd85605de09add9 295 PIRSF PIRSF005963 1 294 1.7E-136 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APH_0367 36469563930e2e10bcd85605de09add9 295 SMART SM00729 50 258 1.1E-10 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 APH_0367 36469563930e2e10bcd85605de09add9 295 Hamap MF_00206 Lipoyl synthase [lipA]. 1 288 151.296 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APH_0367 36469563930e2e10bcd85605de09add9 295 SUPERFAMILY SSF102114 14 282 1.16E-64 T 11-10-2018 APH_0367 36469563930e2e10bcd85605de09add9 295 Pfam PF04055 Radical SAM superfamily 55 216 6.3E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APH_0610 b2ae8b418bb7fd0403d97a746b7d28b9 195 SUPERFAMILY SSF53067 3 105 1.49E-19 T 11-10-2018 APH_0610 b2ae8b418bb7fd0403d97a746b7d28b9 195 Gene3D G3DSA:3.30.420.40 1 132 2.5E-26 T 11-10-2018 APH_0610 b2ae8b418bb7fd0403d97a746b7d28b9 195 Pfam PF00814 Glycoprotease family 33 129 1.1E-15 T 11-10-2018 IPR000905 Gcp-like domain APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 SUPERFAMILY SSF52172 1 176 5.45E-31 T 11-10-2018 IPR011006 CheY-like superfamily APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 SMART SM00448 1 115 3.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 Gene3D G3DSA:3.40.50.2300 1 121 8.0E-32 T 11-10-2018 APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 SMART SM00862 148 225 6.3E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 Gene3D G3DSA:1.10.10.10 122 232 1.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.1E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APH_1099 135a447a8f4fbde6119a4be09bcd4803 276 Pfam PF00072 Response regulator receiver domain 3 116 4.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 Pfam PF01479 S4 domain 94 140 9.7E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 27.756 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 SMART SM01390 6 92 2.8E-25 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 SUPERFAMILY SSF55174 8 203 1.14E-52 T 11-10-2018 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 Gene3D G3DSA:1.10.1050.10 8 203 3.5E-61 T 11-10-2018 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 SMART SM00363 93 157 9.0E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 92 4.4E-19 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 Gene3D G3DSA:3.10.290.10 92 187 3.5E-61 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 APH_0989 2d53349af3acf07ece88dd3aa4d98a77 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 402 429 1.6E-9 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Hamap MF_01588 DNA ligase [ligA]. 4 670 43.355 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 PIRSF PIRSF001604 1 675 1.9E-217 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:1.10.287.610 1 72 4.9E-14 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF52113 597 671 7.29E-18 T 11-10-2018 IPR036420 BRCT domain superfamily APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:2.40.50.140 311 383 2.9E-31 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 310 2.1E-93 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 SMART SM00292 596 673 1.4E-11 T 11-10-2018 IPR001357 BRCT domain APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 120 149 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:3.40.50.10190 593 676 3.8E-24 T 11-10-2018 IPR036420 BRCT domain superfamily APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 315 390 1.2E-33 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 SMART SM00532 5 443 1.3E-187 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF50249 312 392 5.14E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF12826 Helix-hairpin-helix motif 510 576 3.0E-8 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:3.30.470.90 73 310 4.7E-78 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 670 1.6E-12 T 11-10-2018 IPR001357 BRCT domain APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:1.10.150.20 505 587 3.0E-12 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:1.10.150.20 427 503 6.8E-20 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF47781 398 582 2.27E-42 T 11-10-2018 IPR010994 RuvA domain 2-like APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 Gene3D G3DSA:2.20.70.80 388 425 7.0E-9 T 11-10-2018 APH_0138 a37094c98a3e61eca930ca5104d23a0c 677 SUPERFAMILY SSF56091 4 309 8.8E-95 T 11-10-2018 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.30.470.20 247 344 1.1E-41 T 11-10-2018 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 58 299 1.6E-32 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 307 359 9.0E-10 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 SUPERFAMILY SSF51621 514 869 1.22E-107 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:1.10.189.10 348 531 1.5E-66 T 11-10-2018 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:1.20.80.30 114 199 8.0E-86 T 11-10-2018 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.50.30.10 386 511 1.5E-66 T 11-10-2018 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 SUPERFAMILY SSF56059 5 382 6.0E-124 T 11-10-2018 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 PIRSF PIRSF000853 2 874 0.0 T 11-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.30.1490.20 18 246 8.0E-86 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 523 867 7.9E-80 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 759 777 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 505 5.2E-25 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 SUPERFAMILY SSF52009 392 514 3.53E-33 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 APH_0185 f76d1063a2a1aaa1bfb8cef10e9f6ad6 874 Gene3D G3DSA:3.20.20.60 534 872 9.7E-129 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1067 12.252 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 881 1.1E-29 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 2.5E-62 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF56059 128 401 6.01E-98 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.40.50.20 1 116 1.0E-45 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF52440 1 127 5.04E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.30.470.20 673 940 4.1E-103 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.40.50.1380 941 1079 3.6E-34 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF56059 680 938 9.9E-94 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 1.4E-62 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SMART SM01096 422 544 3.9E-59 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.40.50.20 557 669 1.6E-40 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02142 MGS-like domain 963 1045 4.2E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SMART SM00851 960 1046 4.9E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF48108 396 547 2.48E-44 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 544 5.8E-37 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:3.30.470.20 120 403 3.9E-109 T 11-10-2018 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 298 305 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 Gene3D G3DSA:1.10.1030.10 404 548 1.8E-39 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF52440 561 681 5.32E-40 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily APH_0249 b76ed0237d77df8abd9c6a68d20bb527 1086 SUPERFAMILY SSF52335 940 1077 3.01E-34 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 6.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.7E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 7.7E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.7E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 Gene3D G3DSA:3.40.50.720 7 225 1.4E-36 T 11-10-2018 APH_0056 1050d42927636e7f99c87d4c86177601 236 Pfam PF00106 short chain dehydrogenase 9 190 7.8E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0056 1050d42927636e7f99c87d4c86177601 236 SUPERFAMILY SSF51735 8 200 1.04E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 Gene3D G3DSA:3.10.50.30 80 166 1.9E-24 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 Pfam PF03449 Transcription elongation factor, N-terminal 10 78 2.6E-28 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 SUPERFAMILY SSF46557 8 80 1.83E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 22 52 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 164 1.2E-26 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 SUPERFAMILY SSF54534 85 165 1.44E-17 T 11-10-2018 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 Hamap MF_00105 Transcription elongation factor GreA [greA]. 7 164 27.804 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 PIRSF PIRSF006092 5 165 1.8E-42 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APH_1333 ce40c80e97e7533c6fefe1477c79d405 166 Gene3D G3DSA:1.10.287.180 7 79 2.1E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 APH_1166 c0d132a57b51e7b85cfc4ca1fd681b0c 477 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 APH_1166 c0d132a57b51e7b85cfc4ca1fd681b0c 477 SMART SM01329 4 335 2.6E-142 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 APH_1166 c0d132a57b51e7b85cfc4ca1fd681b0c 477 Gene3D G3DSA:3.30.70.1570 369 476 7.7E-11 T 11-10-2018 APH_1166 c0d132a57b51e7b85cfc4ca1fd681b0c 477 SUPERFAMILY SSF53659 2 339 9.0E-111 T 11-10-2018 APH_1166 c0d132a57b51e7b85cfc4ca1fd681b0c 477 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 335 1.4E-88 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 APH_1166 c0d132a57b51e7b85cfc4ca1fd681b0c 477 Gene3D G3DSA:3.40.718.10 2 368 2.7E-120 T 11-10-2018 APH_0045 2801e32d737e382e8e8495f09b55151a 150 Pfam PF02470 MlaD protein 42 116 4.6E-18 T 11-10-2018 IPR003399 Mce/MlaD APH_0308 854d22a2dd362bbb4f7317a84cf1e7bb 120 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 APH_0308 854d22a2dd362bbb4f7317a84cf1e7bb 120 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 3 119 13.58 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_0308 854d22a2dd362bbb4f7317a84cf1e7bb 120 Pfam PF00825 Ribonuclease P 7 116 7.9E-21 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_0308 854d22a2dd362bbb4f7317a84cf1e7bb 120 Gene3D G3DSA:3.30.230.10 2 119 1.3E-20 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0308 854d22a2dd362bbb4f7317a84cf1e7bb 120 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 74 4.0E-7 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APH_0308 854d22a2dd362bbb4f7317a84cf1e7bb 120 SUPERFAMILY SSF54211 3 118 9.61E-21 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0575 6c68de8367761d08be769a1add684e99 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_0575 6c68de8367761d08be769a1add684e99 315 PIRSF PIRSF006621 1 315 5.6E-103 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_0575 6c68de8367761d08be769a1add684e99 315 Gene3D G3DSA:3.20.20.70 5 242 7.7E-76 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0575 6c68de8367761d08be769a1add684e99 315 Pfam PF01207 Dihydrouridine synthase (Dus) 11 311 9.4E-104 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APH_0575 6c68de8367761d08be769a1add684e99 315 SUPERFAMILY SSF51395 8 313 8.06E-90 T 11-10-2018 APH_0575 6c68de8367761d08be769a1add684e99 315 Gene3D G3DSA:1.10.1200.80 246 315 3.5E-10 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF57938 139 216 1.83E-17 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF49493 263 351 2.75E-22 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Pfam PF00684 DnaJ central domain 152 212 2.0E-9 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 39.05 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 SMART SM00271 4 62 4.8E-31 T 11-10-2018 IPR001623 DnaJ domain APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 7 25 3.0E-30 T 11-10-2018 IPR001623 DnaJ domain APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 42 62 3.0E-30 T 11-10-2018 IPR001623 DnaJ domain APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 25 40 3.0E-30 T 11-10-2018 IPR001623 DnaJ domain APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 PRINTS PR00625 DnaJ domain signature 62 81 3.0E-30 T 11-10-2018 IPR001623 DnaJ domain APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF46565 2 109 1.57E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.60.260.20 259 367 7.1E-31 T 11-10-2018 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.60.260.20 122 254 1.0E-30 T 11-10-2018 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:1.10.287.110 2 117 1.6E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Gene3D G3DSA:2.10.230.10 152 212 1.0E-30 T 11-10-2018 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 SUPERFAMILY SSF49493 120 272 4.19E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Pfam PF00226 DnaJ domain 5 67 1.0E-27 T 11-10-2018 IPR001623 DnaJ domain APH_0015 d98c1af6e0258fc4cee437c5385e80b2 382 Pfam PF01556 DnaJ C terminal domain 126 340 2.1E-39 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal APH_0263 6da0e8050611ec7084dde6662c72efa0 320 Gene3D G3DSA:3.40.50.1400 164 301 1.4E-91 T 11-10-2018 APH_0263 6da0e8050611ec7084dde6662c72efa0 320 SUPERFAMILY SSF53800 3 318 1.54E-82 T 11-10-2018 APH_0263 6da0e8050611ec7084dde6662c72efa0 320 ProSitePatterns PS00534 Ferrochelatase signature. 193 211 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APH_0263 6da0e8050611ec7084dde6662c72efa0 320 Hamap MF_00323 Ferrochelatase [hemH]. 3 320 29.493 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APH_0263 6da0e8050611ec7084dde6662c72efa0 320 Pfam PF00762 Ferrochelatase 4 318 2.7E-90 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 APH_0263 6da0e8050611ec7084dde6662c72efa0 320 Gene3D G3DSA:3.40.50.1400 4 317 1.4E-91 T 11-10-2018 APH_1004 ea648052605305ea6ab1c98650cc2e67 90 Pfam PF01722 BolA-like protein 13 87 1.4E-17 T 11-10-2018 IPR002634 BolA protein APH_1004 ea648052605305ea6ab1c98650cc2e67 90 SUPERFAMILY SSF82657 4 88 8.11E-17 T 11-10-2018 IPR036065 BolA-like superfamily APH_1004 ea648052605305ea6ab1c98650cc2e67 90 PIRSF PIRSF003113 1 90 6.2E-18 T 11-10-2018 IPR002634 BolA protein APH_1004 ea648052605305ea6ab1c98650cc2e67 90 Gene3D G3DSA:3.30.300.90 1 87 5.8E-18 T 11-10-2018 APH_0162 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF46548 131 258 1.69E-38 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 APH_0162 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:3.10.20.30 19 129 2.5E-42 T 11-10-2018 IPR012675 Beta-grasp domain superfamily APH_0162 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 3.7E-32 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0162 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APH_0162 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:1.10.1060.10 130 261 2.0E-59 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 APH_0162 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF54292 28 129 2.49E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 APH_0162 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 7.0E-9 T 11-10-2018 APH_0162 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_0159 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF46548 131 258 1.69E-38 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 APH_0159 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:3.10.20.30 19 129 2.5E-42 T 11-10-2018 IPR012675 Beta-grasp domain superfamily APH_0159 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 3.7E-32 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0159 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APH_0159 c233cf57b779166d08734cbcf69faf97 262 Gene3D G3DSA:1.10.1060.10 130 261 2.0E-59 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 APH_0159 c233cf57b779166d08734cbcf69faf97 262 SUPERFAMILY SSF54292 28 129 2.49E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 APH_0159 c233cf57b779166d08734cbcf69faf97 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 7.0E-9 T 11-10-2018 APH_0159 c233cf57b779166d08734cbcf69faf97 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 Pfam PF09397 Ftsk gamma domain 775 833 2.0E-22 T 11-10-2018 IPR018541 FtsK gamma domain APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 SUPERFAMILY SSF46785 774 834 7.25E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 Pfam PF01580 FtsK/SpoIIIE family 452 671 7.2E-62 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 Gene3D G3DSA:3.30.980.40 344 448 3.3E-27 T 11-10-2018 APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 Gene3D G3DSA:1.10.10.10 770 834 2.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 SUPERFAMILY SSF52540 467 742 5.65E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 SMART SM00843 773 835 1.5E-26 T 11-10-2018 IPR018541 FtsK gamma domain APH_0955 e0762873c9d6d76ee04716a1aa2f733f 835 Gene3D G3DSA:3.40.50.300 449 756 4.6E-110 T 11-10-2018 APH_1195 e6f49439a3205377a8bcba61aeca60f0 413 SUPERFAMILY SSF56925 49 403 1.05E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1195 e6f49439a3205377a8bcba61aeca60f0 413 Gene3D G3DSA:2.40.160.20 271 406 3.4E-9 T 11-10-2018 APH_1195 e6f49439a3205377a8bcba61aeca60f0 413 Pfam PF01617 Surface antigen 49 409 7.7E-72 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0945 6648ee983414e13e92463833ec2c9f87 391 Gene3D G3DSA:3.40.640.10 49 294 8.4E-124 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0945 6648ee983414e13e92463833ec2c9f87 391 Gene3D G3DSA:3.90.1150.10 15 380 8.4E-124 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0945 6648ee983414e13e92463833ec2c9f87 391 Pfam PF00202 Aminotransferase class-III 14 384 5.4E-104 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_0945 6648ee983414e13e92463833ec2c9f87 391 PIRSF PIRSF000521 158 390 2.5E-43 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_0945 6648ee983414e13e92463833ec2c9f87 391 PIRSF PIRSF000521 11 175 1.7E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_0945 6648ee983414e13e92463833ec2c9f87 391 SUPERFAMILY SSF53383 5 388 5.56E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 6.3E-35 T 11-10-2018 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.3E-35 T 11-10-2018 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 6.3E-35 T 11-10-2018 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.3E-35 T 11-10-2018 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 6.3E-35 T 11-10-2018 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 SUPERFAMILY SSF51905 9 317 1.0E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0658 a5e3768bd53914576beaefe417c39d2f 321 Gene3D G3DSA:3.50.50.60 125 250 1.1E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 278 296 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 9.3E-75 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 304 4.9E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_0658 a5e3768bd53914576beaefe417c39d2f 321 Gene3D G3DSA:3.50.50.60 11 314 1.1E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0658 a5e3768bd53914576beaefe417c39d2f 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APH_0353 4b8ff222107a43da87b8103a85b59272 569 Pfam PF00557 Metallopeptidase family M24 291 503 3.7E-44 T 11-10-2018 IPR000994 Peptidase M24 APH_0353 4b8ff222107a43da87b8103a85b59272 569 Pfam PF16189 Creatinase/Prolidase N-terminal domain 139 288 1.2E-26 T 11-10-2018 APH_0353 4b8ff222107a43da87b8103a85b59272 569 Gene3D G3DSA:3.90.230.10 282 569 3.4E-95 T 11-10-2018 APH_0353 4b8ff222107a43da87b8103a85b59272 569 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 122 2.4E-10 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 APH_0353 4b8ff222107a43da87b8103a85b59272 569 SUPERFAMILY SSF53092 1 122 1.6E-7 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APH_0353 4b8ff222107a43da87b8103a85b59272 569 Gene3D G3DSA:3.40.350.10 139 272 1.7E-15 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APH_0353 4b8ff222107a43da87b8103a85b59272 569 SUPERFAMILY SSF55920 285 535 5.23E-59 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like APH_0353 4b8ff222107a43da87b8103a85b59272 569 Pfam PF16188 C-terminal region of peptidase_M24 510 569 1.0E-20 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain APH_0353 4b8ff222107a43da87b8103a85b59272 569 Gene3D G3DSA:3.40.350.10 1 138 3.0E-27 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APH_1349 c450362e332ba450e2c9461aa57f91ee 335 Gene3D G3DSA:3.30.360.10 153 316 8.6E-120 T 11-10-2018 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 SMART SM00846 2 154 1.4E-65 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 175 191 4.9E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.9E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 148 166 4.9E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 4.9E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 4.9E-26 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 SUPERFAMILY SSF55347 154 315 2.43E-55 T 11-10-2018 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 PIRSF PIRSF000149 1 334 7.0E-122 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 314 8.4E-49 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 Gene3D G3DSA:3.40.50.720 3 326 8.6E-120 T 11-10-2018 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 105 3.0E-30 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1349 c450362e332ba450e2c9461aa57f91ee 335 SUPERFAMILY SSF51735 2 179 1.84E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 Gene3D G3DSA:1.10.8.100 201 260 1.4E-16 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 261 1.6E-53 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 38 66 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 6 262 48.377 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 SMART SM00650 22 194 1.3E-53 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 Gene3D G3DSA:3.40.50.150 1 198 6.0E-61 T 11-10-2018 APH_0622 99b252d4789c25e9e393ec62a82fcc8f 269 SUPERFAMILY SSF53335 6 262 1.1E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 489 2.2E-38 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 SUPERFAMILY SSF50615 11 94 3.4E-21 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 503 46.678 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Gene3D G3DSA:1.20.150.20 383 506 7.9E-40 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 5.1E-10 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 SUPERFAMILY SSF52540 96 381 3.44E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 375 2.9E-71 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 SUPERFAMILY SSF47917 384 506 5.23E-38 T 11-10-2018 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 PIRSF PIRSF039088 2 506 3.4E-234 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Gene3D G3DSA:2.40.30.20 3 94 3.1E-24 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_1334 23bee617ca17d4ac0327def38f8a7755 506 Gene3D G3DSA:3.40.50.300 95 382 5.0E-124 T 11-10-2018 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 98 1.0E-5 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 Pfam PF00361 Proton-conducting membrane transporter 130 424 2.2E-45 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 330 349 2.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 136 155 2.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 382 408 2.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 2.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0044 044b7309d0c8dd004a7afaffc85d1d67 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 166 190 2.4E-11 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 Pfam PF00162 Phosphoglycerate kinase 11 382 5.8E-124 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 SUPERFAMILY SSF53748 9 382 3.06E-116 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 310 335 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PRINTS PR00477 Phosphoglycerate kinase family signature 371 384 5.5E-56 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 19 29 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 Gene3D G3DSA:3.40.50.1260 13 171 1.1E-125 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 383 30.403 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 Gene3D G3DSA:3.40.50.1260 172 383 1.1E-125 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1321 ec07f9c5d628793e3e5cc2ba2537bb29 384 PIRSF PIRSF000724 3 384 7.8E-122 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_1329 f80d487a0a4fa704b3dc2aca12620dcf 251 Pfam PF01617 Surface antigen 138 246 1.2E-31 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1329 f80d487a0a4fa704b3dc2aca12620dcf 251 SUPERFAMILY SSF56925 175 245 1.57E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1329 f80d487a0a4fa704b3dc2aca12620dcf 251 Gene3D G3DSA:2.40.160.20 61 250 5.7E-7 T 11-10-2018 APH_0164 cd4c78f594c6d5a6fe1699dd6900506d 389 Pfam PF07690 Major Facilitator Superfamily 5 341 2.3E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APH_0164 cd4c78f594c6d5a6fe1699dd6900506d 389 Gene3D G3DSA:1.20.1720.10 1 376 4.6E-78 T 11-10-2018 APH_0164 cd4c78f594c6d5a6fe1699dd6900506d 389 SUPERFAMILY SSF103473 4 379 1.96E-56 T 11-10-2018 IPR036259 MFS transporter superfamily APH_1062 f152bbd8e39eb4fa56f98f06af6fa147 263 Pfam PF12706 Beta-lactamase superfamily domain 45 230 1.5E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase APH_1062 f152bbd8e39eb4fa56f98f06af6fa147 263 Gene3D G3DSA:3.60.15.10 1 263 1.2E-64 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APH_1062 f152bbd8e39eb4fa56f98f06af6fa147 263 SUPERFAMILY SSF56281 1 263 2.36E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APH_1062 f152bbd8e39eb4fa56f98f06af6fa147 263 SMART SM00849 34 209 1.2E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 SUPERFAMILY SSF46785 2 107 1.18E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 Gene3D G3DSA:1.10.260.50 130 384 6.8E-100 T 11-10-2018 APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 Gene3D G3DSA:1.10.10.10 1 112 3.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 SUPERFAMILY SSF53383 117 479 1.25E-75 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 Gene3D G3DSA:3.40.640.10 177 341 6.8E-100 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 Pfam PF02082 Transcriptional regulator 2 52 3.7E-11 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 Gene3D G3DSA:3.90.1150.10 119 473 6.8E-100 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0673 d58a926e8e90725161cfe4ac457c4f69 486 Pfam PF00266 Aminotransferase class-V 119 470 2.5E-51 T 11-10-2018 IPR000192 Aminotransferase class V domain APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 302 1.3E-21 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 40.034 T 11-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.5E-19 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 1.5E-19 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 1.5E-19 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 222 1.5E-19 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 1.5E-19 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.5E-19 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 Gene3D G3DSA:3.50.50.60 127 250 1.1E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 5.4E-13 T 11-10-2018 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.4E-13 T 11-10-2018 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.4E-13 T 11-10-2018 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 5.4E-13 T 11-10-2018 APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 Gene3D G3DSA:3.50.50.60 8 312 1.1E-87 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0734 3866febe22c8eca0872b8b28e37b04fe 338 SUPERFAMILY SSF51905 7 315 1.18E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0421 ddc40b7ed76c235d141d466c29b9260c 193 Pfam PF01926 50S ribosome-binding GTPase 23 141 3.5E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0421 ddc40b7ed76c235d141d466c29b9260c 193 SUPERFAMILY SSF52540 4 192 7.66E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0421 ddc40b7ed76c235d141d466c29b9260c 193 Gene3D G3DSA:3.40.50.300 2 193 1.2E-46 T 11-10-2018 APH_0421 ddc40b7ed76c235d141d466c29b9260c 193 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 8 193 24.761 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.3E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 PIRSF PIRSF000094 3 262 7.9E-109 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 8.0E-86 T 11-10-2018 APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 Gene3D G3DSA:3.40.50.720 1 275 8.5E-65 T 11-10-2018 APH_0473 dbcdc43153fd5c7e6a2307f2b1806d59 275 SUPERFAMILY SSF51735 8 257 1.07E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0004 cc3dbe2961977f97f6711f17222f7271 241 SMART SM00382 28 212 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0004 cc3dbe2961977f97f6711f17222f7271 241 SUPERFAMILY SSF52540 4 227 3.19E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0004 cc3dbe2961977f97f6711f17222f7271 241 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 32 45 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APH_0004 cc3dbe2961977f97f6711f17222f7271 241 Gene3D G3DSA:3.40.50.300 3 238 2.9E-65 T 11-10-2018 APH_0004 cc3dbe2961977f97f6711f17222f7271 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0004 cc3dbe2961977f97f6711f17222f7271 241 Pfam PF00005 ABC transporter 19 164 7.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0288 45fe9ec7943c7ae797a4c430f3afca60 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 11.358 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0288 45fe9ec7943c7ae797a4c430f3afca60 68 Pfam PF00831 Ribosomal L29 protein 6 59 1.6E-11 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0288 45fe9ec7943c7ae797a4c430f3afca60 68 SUPERFAMILY SSF46561 4 63 1.24E-12 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0288 45fe9ec7943c7ae797a4c430f3afca60 68 Gene3D G3DSA:1.20.58.1890 1 64 3.6E-11 T 11-10-2018 APH_1012 004cfd74cd39a25d2467468acccf4c67 197 Gene3D G3DSA:3.90.45.10 1 185 3.9E-41 T 11-10-2018 IPR036821 Peptide deformylase superfamily APH_1012 004cfd74cd39a25d2467468acccf4c67 197 Pfam PF01327 Polypeptide deformylase 13 171 1.9E-35 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 121 139 4.8E-21 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 34 63 4.8E-21 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 108 119 4.8E-21 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 PRINTS PR01576 Peptide deformylase signature 140 169 4.8E-21 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 Hamap MF_00163 Peptide deformylase [def]. 2 186 20.878 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 PIRSF PIRSF004749 3 185 8.8E-33 T 11-10-2018 IPR023635 Peptide deformylase APH_1012 004cfd74cd39a25d2467468acccf4c67 197 SUPERFAMILY SSF56420 13 173 3.14E-39 T 11-10-2018 IPR036821 Peptide deformylase superfamily APH_1405 146d607a7fd020ab853a2b0a47cf64cb 281 Pfam PF03524 Conjugal transfer protein 39 278 1.8E-53 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APH_1405 146d607a7fd020ab853a2b0a47cf64cb 281 Gene3D G3DSA:2.60.40.2500 178 281 1.9E-15 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily APH_1169 25ce26223dde4f3b88cdc992d6ce1711 316 Gene3D G3DSA:2.40.160.20 96 278 6.7E-10 T 11-10-2018 APH_1169 25ce26223dde4f3b88cdc992d6ce1711 316 SUPERFAMILY SSF56925 6 316 1.07E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1169 25ce26223dde4f3b88cdc992d6ce1711 316 Pfam PF01617 Surface antigen 1 316 1.6E-62 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 Pfam PF00902 Sec-independent protein translocase protein (TatC) 6 223 1.0E-64 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 ProSitePatterns PS01218 TatC family signature. 156 175 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 1 240 16.265 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 99 125 1.8E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 81 99 1.8E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 2 29 1.8E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_0443 5c5e9c99819cc740e6988500a6cd16b8 241 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 156 184 1.8E-38 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APH_1355 b7ecee4ccba21d266ec3b6de4d2ca85d 461 Pfam PF01617 Surface antigen 45 461 6.0E-60 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1355 b7ecee4ccba21d266ec3b6de4d2ca85d 461 SUPERFAMILY SSF56925 339 461 6.02E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1355 b7ecee4ccba21d266ec3b6de4d2ca85d 461 Gene3D G3DSA:2.40.160.20 293 427 4.6E-5 T 11-10-2018 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 PIRSF PIRSF001438 2 303 2.0E-101 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 214 3.3E-68 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 Gene3D G3DSA:3.30.160.40 223 301 1.3E-10 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 296 2.0E-10 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 Gene3D G3DSA:3.40.190.10 104 203 1.4E-72 T 11-10-2018 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 SUPERFAMILY SSF53850 5 219 1.41E-71 T 11-10-2018 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 Gene3D G3DSA:3.40.190.10 7 211 1.4E-72 T 11-10-2018 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 32.411 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.3E-36 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.3E-36 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.3E-36 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.3E-36 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.3E-36 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 SUPERFAMILY SSF54782 221 300 3.66E-15 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_0746 e76b43f7f6ed36517cf7b301e2bae348 304 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 APH_1270 c292029b72bb8bc66e4c2c6c9595e438 275 PIRSF PIRSF006487 145 248 11.0 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 APH_1270 c292029b72bb8bc66e4c2c6c9595e438 275 PIRSF PIRSF006487 3 99 2.4E-8 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 APH_1270 c292029b72bb8bc66e4c2c6c9595e438 275 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 91 5.5E-11 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain APH_1270 c292029b72bb8bc66e4c2c6c9595e438 275 Gene3D G3DSA:2.40.30.160 164 257 1.1E-15 T 11-10-2018 APH_1270 c292029b72bb8bc66e4c2c6c9595e438 275 SUPERFAMILY SSF103025 4 208 5.49E-46 T 11-10-2018 APH_1270 c292029b72bb8bc66e4c2c6c9595e438 275 Gene3D G3DSA:3.30.70.1400 8 92 7.5E-23 T 11-10-2018 APH_0200 b588fe3366592ec9cd36ab3e1c72a964 319 Pfam PF00589 Phage integrase family 134 297 2.9E-36 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APH_0200 b588fe3366592ec9cd36ab3e1c72a964 319 Gene3D G3DSA:1.10.150.130 15 117 2.1E-14 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal APH_0200 b588fe3366592ec9cd36ab3e1c72a964 319 SUPERFAMILY SSF56349 14 302 5.0E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APH_0200 b588fe3366592ec9cd36ab3e1c72a964 319 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 19 107 1.1E-11 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APH_0200 b588fe3366592ec9cd36ab3e1c72a964 319 Gene3D G3DSA:1.10.443.10 129 303 5.9E-48 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 APH_1033 96ca4bf04698934163b1e38a502342d7 690 SUPERFAMILY SSF50447 264 404 2.52E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_1033 96ca4bf04698934163b1e38a502342d7 690 Hamap MF_00054_B Elongation factor G [fusA]. 6 688 106.512 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 APH_1033 96ca4bf04698934163b1e38a502342d7 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site APH_1033 96ca4bf04698934163b1e38a502342d7 690 Gene3D G3DSA:3.30.70.870 406 483 1.9E-29 T 11-10-2018 APH_1033 96ca4bf04698934163b1e38a502342d7 690 Pfam PF03144 Elongation factor Tu domain 2 324 391 6.8E-12 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 SUPERFAMILY SSF54211 479 599 8.85E-40 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_1033 96ca4bf04698934163b1e38a502342d7 690 Gene3D G3DSA:3.30.70.240 604 674 3.9E-84 T 11-10-2018 APH_1033 96ca4bf04698934163b1e38a502342d7 690 Pfam PF14492 Elongation Factor G, domain II 404 477 1.0E-30 T 11-10-2018 APH_1033 96ca4bf04698934163b1e38a502342d7 690 Gene3D G3DSA:2.40.30.10 292 405 5.9E-41 T 11-10-2018 APH_1033 96ca4bf04698934163b1e38a502342d7 690 Gene3D G3DSA:3.30.230.10 484 683 3.9E-84 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_1033 96ca4bf04698934163b1e38a502342d7 690 SUPERFAMILY SSF54980 402 480 2.77E-22 T 11-10-2018 IPR035647 EF-G domain III/V-like APH_1033 96ca4bf04698934163b1e38a502342d7 690 SMART SM00838 600 688 6.8E-48 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like APH_1033 96ca4bf04698934163b1e38a502342d7 690 Pfam PF03764 Elongation factor G, domain IV 479 597 1.2E-40 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.8E-16 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 Pfam PF00679 Elongation factor G C-terminus 600 683 1.1E-28 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like APH_1033 96ca4bf04698934163b1e38a502342d7 690 Gene3D G3DSA:3.40.50.300 3 291 3.9E-112 T 11-10-2018 APH_1033 96ca4bf04698934163b1e38a502342d7 690 SUPERFAMILY SSF54980 600 684 2.16E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like APH_1033 96ca4bf04698934163b1e38a502342d7 690 SMART SM00889 480 598 1.3E-60 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APH_1033 96ca4bf04698934163b1e38a502342d7 690 SUPERFAMILY SSF52540 6 281 1.16E-107 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1033 96ca4bf04698934163b1e38a502342d7 690 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 6.1E-69 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0745 af3a48f4822029e3488208ce888c043c 302 SUPERFAMILY SSF56176 23 203 1.03E-35 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 APH_0745 af3a48f4822029e3488208ce888c043c 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 295 8.5E-21 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 APH_0745 af3a48f4822029e3488208ce888c043c 302 Gene3D G3DSA:3.30.465.10 87 212 8.8E-31 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 APH_0745 af3a48f4822029e3488208ce888c043c 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 68.164 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 APH_0745 af3a48f4822029e3488208ce888c043c 302 SUPERFAMILY SSF56194 194 297 2.75E-25 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 APH_0745 af3a48f4822029e3488208ce888c043c 302 Gene3D G3DSA:3.30.43.10 8 84 2.8E-13 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 APH_0745 af3a48f4822029e3488208ce888c043c 302 Pfam PF01565 FAD binding domain 39 162 4.6E-15 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APH_0745 af3a48f4822029e3488208ce888c043c 302 Gene3D G3DSA:3.90.78.10 215 301 8.1E-24 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Gene3D G3DSA:2.30.22.10 151 207 1.8E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 SUPERFAMILY SSF51064 152 207 2.35E-15 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Hamap MF_01151 Protein GrpE [grpE]. 2 207 16.246 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Gene3D G3DSA:3.90.20.20 48 150 4.6E-14 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 SUPERFAMILY SSF58014 63 151 2.88E-18 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Pfam PF01025 GrpE 54 206 8.6E-44 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 80 96 1.2E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 186 205 1.2E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 108 123 1.2E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APH_0036 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 159 174 1.2E-16 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 APH_1016 0a24cfa92fb63bb14239acb226c46498 378 Pfam PF00155 Aminotransferase class I and II 44 363 1.3E-42 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_1016 0a24cfa92fb63bb14239acb226c46498 378 Gene3D G3DSA:3.40.640.10 60 279 5.0E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_1016 0a24cfa92fb63bb14239acb226c46498 378 Gene3D G3DSA:3.90.1150.10 44 360 5.0E-97 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_1016 0a24cfa92fb63bb14239acb226c46498 378 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 228 237 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 APH_1016 0a24cfa92fb63bb14239acb226c46498 378 SUPERFAMILY SSF53383 26 366 1.1E-86 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 SUPERFAMILY SSF47005 138 181 2.62E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 SUPERFAMILY SSF52777 194 419 2.89E-79 T 11-10-2018 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Gene3D G3DSA:2.40.50.100 2 104 5.9E-27 T 11-10-2018 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 419 2.0E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Pfam PF02817 e3 binding domain 144 179 1.1E-14 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Gene3D G3DSA:3.30.559.10 181 418 4.2E-91 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Gene3D G3DSA:4.10.320.10 141 180 1.4E-14 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 Pfam PF00364 Biotin-requiring enzyme 4 78 2.3E-14 T 11-10-2018 IPR000089 Biotin/lipoyl attachment APH_1257 c2a4b8fa8ce1ba81c0dd127f489a62b9 420 SUPERFAMILY SSF51230 1 94 1.24E-22 T 11-10-2018 IPR011053 Single hybrid motif APH_0434 3d96acea23385a18bdde29718a7ca175 426 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 333 415 4.9E-27 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 SUPERFAMILY SSF142019 7 240 1.14E-81 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 344 355 - T 11-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 Pfam PF10531 SLBB domain 242 293 1.6E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 SUPERFAMILY SSF140490 327 420 9.81E-33 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 46 218 4.4E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 Gene3D G3DSA:3.10.20.600 232 328 6.6E-42 T 11-10-2018 APH_0434 3d96acea23385a18bdde29718a7ca175 426 Gene3D G3DSA:1.20.1440.230 329 426 3.0E-33 T 11-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 SUPERFAMILY SSF142984 241 326 2.48E-25 T 11-10-2018 APH_0434 3d96acea23385a18bdde29718a7ca175 426 Gene3D G3DSA:3.40.50.11540 51 231 4.0E-77 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0434 3d96acea23385a18bdde29718a7ca175 426 SMART SM00928 331 376 9.2E-23 T 11-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 SUPERFAMILY SSF53732 5 604 1.2E-205 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 ProSitePatterns PS01244 Aconitase family signature 2. 472 485 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 Pfam PF00694 Aconitase C-terminal domain 675 802 1.1E-44 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 275 288 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 213 228 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 367 381 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 472 485 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 289 302 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 170 178 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 199 212 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 146 159 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 PRINTS PR00415 Aconitase family signature 410 421 3.0E-39 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 SUPERFAMILY SSF52016 610 868 2.35E-75 T 11-10-2018 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 ProSitePatterns PS00450 Aconitase family signature 1. 406 422 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 Pfam PF00330 Aconitase family (aconitate hydratase) 79 541 7.3E-167 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.30.499.10 368 569 4.8E-85 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.20.19.10 639 870 5.2E-94 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:3.30.499.20 6 367 9.9E-150 T 11-10-2018 APH_1117 15468b5c5dc81cec6ae1846fb12cee98 873 Gene3D G3DSA:1.10.1440.20 570 630 1.4E-15 T 11-10-2018 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 SMART SM00116 153 201 1.1E-5 T 11-10-2018 IPR000644 CBS domain APH_0088 4a39cf3f5ea873a28215619819f49f68 486 SMART SM00116 92 140 1.2E-12 T 11-10-2018 IPR000644 CBS domain APH_0088 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF51412 3 471 4.97E-118 T 11-10-2018 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF54631 59 199 9.24E-33 T 11-10-2018 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 4 467 1.0E-154 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 4 480 79.129 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00571 CBS domain 145 196 8.5E-7 T 11-10-2018 IPR000644 CBS domain APH_0088 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00571 CBS domain 91 136 3.0E-13 T 11-10-2018 IPR000644 CBS domain APH_0088 4a39cf3f5ea873a28215619819f49f68 486 PIRSF PIRSF000130 1 482 3.8E-199 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 Gene3D G3DSA:3.20.20.70 1 480 7.0E-204 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 SMART SM01240 3 467 3.9E-300 T 11-10-2018 APH_0088 4a39cf3f5ea873a28215619819f49f68 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 291 303 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 APH_0688 118225b8d1177d670fcbcdcb8f7f099c 278 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 1 162 4.3E-39 T 11-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal APH_0688 118225b8d1177d670fcbcdcb8f7f099c 278 Pfam PF09356 Phage conserved hypothetical protein BR0599 193 269 2.1E-25 T 11-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal APH_0246 a74eb426f02bb83cef2f0f8dff529b6c 239 Gene3D G3DSA:3.40.50.10300 23 237 4.1E-52 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 APH_0246 a74eb426f02bb83cef2f0f8dff529b6c 239 SUPERFAMILY SSF102645 26 234 3.4E-56 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 APH_0246 a74eb426f02bb83cef2f0f8dff529b6c 239 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 26 204 1.5E-49 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 APH_0377 3417ed04c0d7b6d22c39b74de0f26d99 2360 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 319 517 5.9E-14 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Gene3D G3DSA:3.30.70.270 293 455 2.7E-53 T 11-10-2018 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SMART SM00267 284 454 1.3E-55 T 11-10-2018 IPR000160 GGDEF domain APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SMART SM00448 3 117 2.5E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SMART SM00448 157 271 6.0E-4 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SUPERFAMILY SSF52172 148 289 9.25E-15 T 11-10-2018 IPR011006 CheY-like superfamily APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 448 5.4E-45 T 11-10-2018 IPR000160 GGDEF domain APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SUPERFAMILY SSF52172 4 133 3.13E-37 T 11-10-2018 IPR011006 CheY-like superfamily APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Gene3D G3DSA:3.40.50.12740 1 292 6.2E-78 T 11-10-2018 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Pfam PF00072 Response regulator receiver domain 5 117 6.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 Pfam PF00072 Response regulator receiver domain 159 272 1.8E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0551 d0b43ef4c8c6f6fd5a784a0a32c61544 456 SUPERFAMILY SSF55073 300 451 1.18E-46 T 11-10-2018 IPR029787 Nucleotide cyclase APH_0749 1554ac48fc6e2cee047549307ee3d86d 189 Gene3D G3DSA:3.40.50.1950 1 189 1.6E-72 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 APH_0749 1554ac48fc6e2cee047549307ee3d86d 189 SUPERFAMILY SSF52507 2 179 3.14E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 APH_0749 1554ac48fc6e2cee047549307ee3d86d 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 186 34.766 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like APH_0749 1554ac48fc6e2cee047549307ee3d86d 189 Pfam PF02441 Flavoprotein 2 166 1.5E-26 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 APH_0020 264fad3509cd99f86b63a39acffb34e9 343 Gene3D G3DSA:3.20.20.210 12 343 7.0E-98 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 APH_0020 264fad3509cd99f86b63a39acffb34e9 343 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 21 342 8.8E-93 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APH_0020 264fad3509cd99f86b63a39acffb34e9 343 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 28 37 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 APH_0020 264fad3509cd99f86b63a39acffb34e9 343 SUPERFAMILY SSF51726 21 342 2.62E-81 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 APH_1314 c90bcdd1228c92b373bf6479f61d8bd3 363 Gene3D G3DSA:3.40.50.10990 172 342 3.4E-53 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 APH_1314 c90bcdd1228c92b373bf6479f61d8bd3 363 SUPERFAMILY SSF142695 187 342 1.29E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 APH_1314 c90bcdd1228c92b373bf6479f61d8bd3 363 Pfam PF00925 GTP cyclohydrolase II 187 339 1.1E-49 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 APH_0178 f9def4dbfa60b5de4908fdcb9de57dbf 286 Pfam PF12146 Serine aminopeptidase, S33 26 272 3.8E-16 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 APH_0178 f9def4dbfa60b5de4908fdcb9de57dbf 286 SUPERFAMILY SSF53474 5 285 3.44E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0178 f9def4dbfa60b5de4908fdcb9de57dbf 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 228 242 8.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0178 f9def4dbfa60b5de4908fdcb9de57dbf 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 8.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0178 f9def4dbfa60b5de4908fdcb9de57dbf 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 8.0E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0998 c3c74d239adc349929c52d4c0642278d 109 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 94 1.1E-9 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0998 c3c74d239adc349929c52d4c0642278d 109 SUPERFAMILY SSF81343 3 102 1.72E-17 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0998 c3c74d239adc349929c52d4c0642278d 109 Gene3D G3DSA:1.20.1300.10 1 105 1.5E-16 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_1247 a5e2742723c47b610f3ca24b57e11df5 316 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 198 210 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site APH_1247 a5e2742723c47b610f3ca24b57e11df5 316 SUPERFAMILY SSF48576 4 315 5.4E-83 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily APH_1247 a5e2742723c47b610f3ca24b57e11df5 316 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 76 90 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site APH_1247 a5e2742723c47b610f3ca24b57e11df5 316 Pfam PF00348 Polyprenyl synthetase 25 256 3.2E-64 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 APH_1247 a5e2742723c47b610f3ca24b57e11df5 316 Gene3D G3DSA:1.10.600.10 1 316 3.1E-91 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 ProSitePatterns PS00359 Ribosomal protein L11 signature. 132 147 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 SMART SM00649 10 146 3.4E-51 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 147 25.709 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 SUPERFAMILY SSF46906 74 146 2.22E-22 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 Pfam PF00298 Ribosomal protein L11, RNA binding domain 80 145 1.3E-21 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 SUPERFAMILY SSF54747 7 77 2.88E-17 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 Gene3D G3DSA:3.30.1550.10 4 79 1.9E-21 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 72 2.0E-16 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal APH_1028 da33d701ed80c6ee99d5af0590b15c64 148 Gene3D G3DSA:1.10.10.2720 80 148 9.1E-26 T 11-10-2018 APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 79 3.0E-25 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 Gene3D G3DSA:3.30.160.20 7 78 1.3E-27 T 11-10-2018 APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 169 30.936 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 1.2E-23 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 SUPERFAMILY SSF54768 14 81 5.02E-21 T 11-10-2018 APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 SUPERFAMILY SSF54211 85 165 3.54E-22 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0297 22ebada9f1dd5389ea46561fab69bfb7 173 Gene3D G3DSA:3.30.230.10 79 173 2.6E-31 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0097 9213cf4b87d5277e78c69914ec1b7bfa 158 Pfam PF02556 Preprotein translocase subunit SecB 2 152 3.9E-49 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_0097 9213cf4b87d5277e78c69914ec1b7bfa 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 27.962 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APH_0097 9213cf4b87d5277e78c69914ec1b7bfa 158 Gene3D G3DSA:3.10.420.10 1 158 1.1E-51 T 11-10-2018 IPR035958 SecB-like superfamily APH_0097 9213cf4b87d5277e78c69914ec1b7bfa 158 SUPERFAMILY SSF54611 3 156 9.16E-42 T 11-10-2018 IPR035958 SecB-like superfamily APH_0784 4361d629ba091ea12b95feed5106f36e 91 SMART SM00411 1 90 9.6E-5 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_0784 4361d629ba091ea12b95feed5106f36e 91 Gene3D G3DSA:4.10.520.10 1 91 1.3E-15 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 APH_0784 4361d629ba091ea12b95feed5106f36e 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_0784 4361d629ba091ea12b95feed5106f36e 91 SUPERFAMILY SSF47729 1 90 2.06E-18 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 SUPERFAMILY SSF81442 9 517 1.83E-206 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 Gene3D G3DSA:1.20.210.10 9 518 2.4E-224 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 21 466 9.2E-144 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 346 364 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 424 445 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 111 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 241 262 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 332 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 59 82 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 190 209 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 287 302 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 161 179 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 374 393 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 12 37 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 129 141 3.7E-137 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1085 d975f4cf1d6375ce57654f0c6febc7b6 518 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 243 297 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0131 5adae88187b5dbe2e8281dabdeef3f42 145 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 1 125 5.8E-31 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APH_1305 fc50790a31c924e1e2f32654dc236acc 571 Gene3D G3DSA:3.40.50.720 404 565 4.3E-29 T 11-10-2018 APH_1305 fc50790a31c924e1e2f32654dc236acc 571 Pfam PF02254 TrkA-N domain 408 521 8.0E-20 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APH_1305 fc50790a31c924e1e2f32654dc236acc 571 Gene3D G3DSA:1.20.1530.20 3 382 7.1E-81 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily APH_1305 fc50790a31c924e1e2f32654dc236acc 571 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 9.2E-58 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APH_1305 fc50790a31c924e1e2f32654dc236acc 571 SUPERFAMILY SSF51735 406 536 1.32E-28 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_1255 6095eea3ea8d401607074377fc3cdff6 268 Gene3D G3DSA:2.40.160.20 90 230 1.2E-9 T 11-10-2018 APH_1255 6095eea3ea8d401607074377fc3cdff6 268 Pfam PF01617 Surface antigen 109 268 7.8E-52 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1255 6095eea3ea8d401607074377fc3cdff6 268 SUPERFAMILY SSF56925 146 268 7.32E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Pfam PF02938 GAD domain 316 407 6.3E-14 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:3.30.1360.30 280 424 2.6E-164 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF55681 124 560 8.11E-94 T 11-10-2018 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 587 29.715 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF55261 297 424 3.76E-31 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 1.1E-21 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.1E-21 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 1.1E-21 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.1E-21 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 561 7.5E-94 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:2.40.50.140 1 107 2.1E-30 T 11-10-2018 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 SUPERFAMILY SSF50249 4 109 1.03E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Gene3D G3DSA:3.30.930.10 123 584 2.6E-164 T 11-10-2018 APH_0190 404a834130b0d162c64ad3bd61f7dceb 598 Pfam PF01336 OB-fold nucleic acid binding domain 21 85 9.8E-12 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:2.170.220.10 117 227 1.2E-140 T 11-10-2018 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 SUPERFAMILY SSF47323 354 507 1.5E-32 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 SUPERFAMILY SSF52374 3 351 2.68E-104 T 11-10-2018 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:3.40.50.620 6 338 1.2E-140 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1079 3f1a5792afd7e822498ba16d067493d8 513 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 508 42.358 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 133 1.3E-11 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 1.3E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.3E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.3E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 1.3E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.3E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 1.3E-30 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 Pfam PF09334 tRNA synthetases class I (M) 145 365 1.8E-64 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1079 3f1a5792afd7e822498ba16d067493d8 513 Gene3D G3DSA:1.10.730.10 342 512 2.6E-38 T 11-10-2018 APH_1001 29a8a1fde49b59413ee05767cb2830d5 440 Gene3D G3DSA:3.65.10.10 23 237 4.1E-49 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 APH_1001 29a8a1fde49b59413ee05767cb2830d5 440 SUPERFAMILY SSF55205 5 429 7.52E-37 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APH_1001 29a8a1fde49b59413ee05767cb2830d5 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 21 413 2.7E-21 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 APH_1001 29a8a1fde49b59413ee05767cb2830d5 440 Gene3D G3DSA:3.65.10.10 238 413 4.1E-49 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 APH_0962 5ff1e657bfdaa6a39b33b1e13c861ffa 279 SUPERFAMILY SSF52821 96 242 9.88E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily APH_0962 5ff1e657bfdaa6a39b33b1e13c861ffa 279 Hamap MF_00469 UPF0176 protein YceA [yceA]. 5 258 39.107 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 APH_0962 5ff1e657bfdaa6a39b33b1e13c861ffa 279 Gene3D G3DSA:3.30.70.100 2 99 3.3E-33 T 11-10-2018 APH_0962 5ff1e657bfdaa6a39b33b1e13c861ffa 279 Pfam PF00581 Rhodanese-like domain 122 212 1.4E-9 T 11-10-2018 IPR001763 Rhodanese-like domain APH_0962 5ff1e657bfdaa6a39b33b1e13c861ffa 279 SMART SM00450 116 218 3.3E-17 T 11-10-2018 IPR001763 Rhodanese-like domain APH_0962 5ff1e657bfdaa6a39b33b1e13c861ffa 279 Gene3D G3DSA:3.40.250.10 100 251 6.3E-45 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily APH_0017 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 183 4.5E-48 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 APH_0017 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 192 19.365 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 APH_0017 623b2f5b63b61bc2aa31a5f5fd3e34ab 192 SMART SM01207 7 184 4.8E-75 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 Hamap MF_00220_B Dihydroorotase [pyrC]. 21 446 41.935 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 Gene3D G3DSA:2.30.40.10 27 443 2.5E-132 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 Gene3D G3DSA:3.20.20.140 80 390 2.5E-132 T 11-10-2018 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 SUPERFAMILY SSF51556 79 390 2.34E-102 T 11-10-2018 IPR032466 Metal-dependent hydrolase APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 SUPERFAMILY SSF51338 22 445 1.33E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 ProSitePatterns PS00482 Dihydroorotase signature 1. 82 90 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 Pfam PF01979 Amidohydrolase family 75 443 2.6E-31 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 APH_0245 04a3b62e48fbc55f4a9ea04b010b7853 447 ProSitePatterns PS00483 Dihydroorotase signature 2. 326 337 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Pfam PF00072 Response regulator receiver domain 693 804 4.6E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 SUPERFAMILY SSF47384 414 485 1.86E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 SMART SM00448 691 804 6.3E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 SMART SM00388 422 488 1.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 532 655 3.8E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Pfam PF00512 His Kinase A (phospho-acceptor) domain 424 486 6.1E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Gene3D G3DSA:3.30.450.20 305 413 4.4E-5 T 11-10-2018 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Gene3D G3DSA:3.40.50.2300 688 814 3.8E-26 T 11-10-2018 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 SUPERFAMILY SSF52172 691 809 4.98E-26 T 11-10-2018 IPR011006 CheY-like superfamily APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 SUPERFAMILY SSF55874 478 658 7.2E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 SMART SM00387 529 658 1.1E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Gene3D G3DSA:3.30.565.10 490 663 1.3E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 615 5.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 636 5.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 642 655 5.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 601 5.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0582 d4e24c47e6680b385d75a172fcfefee1 814 Gene3D G3DSA:1.10.287.130 414 487 1.5E-20 T 11-10-2018 APH_0187 e5ab9489aa54360ed70feffae4f4fd2b 207 SUPERFAMILY SSF56784 4 182 9.41E-32 T 11-10-2018 IPR036412 HAD-like superfamily APH_0187 e5ab9489aa54360ed70feffae4f4fd2b 207 Gene3D G3DSA:3.40.50.1000 7 179 1.5E-47 T 11-10-2018 IPR023214 HAD superfamily APH_0187 e5ab9489aa54360ed70feffae4f4fd2b 207 Gene3D G3DSA:1.10.150.730 19 79 1.5E-47 T 11-10-2018 APH_0187 e5ab9489aa54360ed70feffae4f4fd2b 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 176 5.2E-28 T 11-10-2018 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 SUPERFAMILY SSF51735 5 158 1.82E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 317 3.4E-31 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 PIRSF PIRSF000148 2 337 3.0E-94 T 11-10-2018 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 Gene3D G3DSA:3.30.360.10 131 315 1.1E-96 T 11-10-2018 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 115 1.4E-17 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 SUPERFAMILY SSF55347 132 317 6.83E-53 T 11-10-2018 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 SMART SM00859 4 120 3.1E-8 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APH_1346 cb8ee6693e8cd25c6f00b588dd642e8c 337 Gene3D G3DSA:3.40.50.720 5 330 1.1E-96 T 11-10-2018 APH_0130 2013574317c68a5e9dae4761ac2a81e1 185 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 26.557 T 11-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 APH_0130 2013574317c68a5e9dae4761ac2a81e1 185 Gene3D G3DSA:2.70.40.10 1 157 4.8E-54 T 11-10-2018 IPR036157 dUTPase-like superfamily APH_0130 2013574317c68a5e9dae4761ac2a81e1 185 SUPERFAMILY SSF51283 3 183 3.01E-48 T 11-10-2018 IPR036157 dUTPase-like superfamily APH_0352 74b8d4c0e6b919a72d1d52a1a9684095 165 Gene3D G3DSA:2.40.70.10 44 164 3.4E-32 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily APH_0352 74b8d4c0e6b919a72d1d52a1a9684095 165 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 70 81 - T 11-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 APH_0352 74b8d4c0e6b919a72d1d52a1a9684095 165 SUPERFAMILY SSF50630 50 154 6.16E-20 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily APH_0352 74b8d4c0e6b919a72d1d52a1a9684095 165 Pfam PF13975 gag-polyprotein putative aspartyl protease 61 150 1.7E-23 T 11-10-2018 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 Gene3D G3DSA:1.10.8.50 1 72 3.6E-25 T 11-10-2018 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 Gene3D G3DSA:4.10.910.10 73 123 1.4E-25 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 25.63 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 SUPERFAMILY SSF46946 2 113 6.22E-43 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 PIRSF PIRSF002134 1 123 5.5E-41 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0301 4cbe6406f1e4836c004dff7daf354614 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.8E-29 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_1207 af70a489003bd4e7dee739e02b7564df 510 SUPERFAMILY SSF52335 4 192 1.28E-56 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily APH_1207 af70a489003bd4e7dee739e02b7564df 510 SUPERFAMILY SSF53927 210 510 1.2E-111 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 APH_1207 af70a489003bd4e7dee739e02b7564df 510 Pfam PF02142 MGS-like domain 17 128 4.4E-19 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain APH_1207 af70a489003bd4e7dee739e02b7564df 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 4 510 38.453 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_1207 af70a489003bd4e7dee739e02b7564df 510 SMART SM00798 134 446 1.0E-150 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_1207 af70a489003bd4e7dee739e02b7564df 510 PIRSF PIRSF000414 1 510 4.2E-193 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_1207 af70a489003bd4e7dee739e02b7564df 510 SMART SM00851 16 129 5.2E-42 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain APH_1207 af70a489003bd4e7dee739e02b7564df 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 445 7.7E-103 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_1207 af70a489003bd4e7dee739e02b7564df 510 Gene3D G3DSA:3.40.140.20 205 360 6.2E-52 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_1207 af70a489003bd4e7dee739e02b7564df 510 Gene3D G3DSA:3.40.50.1380 1 193 3.5E-71 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily APH_1207 af70a489003bd4e7dee739e02b7564df 510 Gene3D G3DSA:3.40.140.20 378 510 4.2E-51 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 APH_0260 61c94bbcb92dcd8f689352136fb4c613 284 Pfam PF01145 SPFH domain / Band 7 family 68 229 5.5E-18 T 11-10-2018 IPR001107 Band 7 domain APH_0260 61c94bbcb92dcd8f689352136fb4c613 284 SUPERFAMILY SSF117892 96 223 4.58E-12 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily APH_0260 61c94bbcb92dcd8f689352136fb4c613 284 SMART SM00244 58 220 6.2E-11 T 11-10-2018 IPR001107 Band 7 domain APH_0260 61c94bbcb92dcd8f689352136fb4c613 284 Gene3D G3DSA:3.30.479.30 92 222 1.9E-10 T 11-10-2018 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF143517 982 1103 3.01E-29 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.40.50.11180 20 295 2.2E-62 T 11-10-2018 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF52540 637 904 1.48E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.30.2060.10 122 209 2.2E-62 T 11-10-2018 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM00490 805 892 2.2E-16 T 11-10-2018 IPR001650 Helicase, C-terminal APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF03461 TRCF domain 990 1073 6.4E-24 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF141259 456 523 6.15E-18 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF02559 CarD-like/TRCF domain 464 554 7.0E-20 T 11-10-2018 IPR003711 CarD-like/TRCF domain APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF52540 9 326 1.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF00270 DEAD/DEAH box helicase 589 746 2.4E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM01058 463 558 7.2E-32 T 11-10-2018 IPR003711 CarD-like/TRCF domain APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Pfam PF00271 Helicase conserved C-terminal domain 786 891 7.5E-16 T 11-10-2018 IPR001650 Helicase, C-terminal APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 6 1087 24.86 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM00982 988 1088 5.9E-33 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SUPERFAMILY SSF52540 354 458 2.0E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.90.1150.50 984 1126 3.2E-27 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.40.50.300 462 971 4.7E-197 T 11-10-2018 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:3.40.50.300 524 763 4.7E-197 T 11-10-2018 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 Gene3D G3DSA:2.30.30.840 467 523 4.7E-197 T 11-10-2018 APH_0107 6d6cba9e26fc5c254e2cfe973f7f2c64 1139 SMART SM00487 581 778 1.9E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 Gene3D G3DSA:1.25.40.20 332 490 7.6E-25 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SUPERFAMILY SSF48403 102 192 7.46E-5 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 Pfam PF12796 Ankyrin repeats (3 copies) 340 409 1.7E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 Gene3D G3DSA:1.25.40.20 498 649 1.2E-14 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 Gene3D G3DSA:1.25.40.20 136 280 3.8E-7 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 603 633 740.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 181 220 1500.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 526 556 6.1E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 142 171 5.2 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 345 375 5.5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 446 479 2.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 379 408 0.0011 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 570 600 67.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SMART SM00248 412 442 2600.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 SUPERFAMILY SSF48403 347 624 2.94E-34 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0928 ae47c2c5bbbc30db8cda423bdd7f1a3a 886 Pfam PF13606 Ankyrin repeat 527 556 0.0025 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_1120 40848422c51ac5f1b28283bbd758b038 135 Gene3D G3DSA:2.60.40.1470 9 134 1.4E-42 T 11-10-2018 IPR036767 ApaG domain superfamily APH_1120 40848422c51ac5f1b28283bbd758b038 135 SUPERFAMILY SSF110069 13 130 5.1E-43 T 11-10-2018 IPR036767 ApaG domain superfamily APH_1120 40848422c51ac5f1b28283bbd758b038 135 Pfam PF04379 ApaG domain 24 108 3.2E-31 T 11-10-2018 IPR007474 ApaG domain APH_0231 303cdacb04be3d1f5caa580828895c54 510 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 141 3.0E-8 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 SUPERFAMILY SSF52949 24 165 3.12E-15 T 11-10-2018 APH_0231 303cdacb04be3d1f5caa580828895c54 510 Gene3D G3DSA:3.40.220.10 11 166 2.1E-16 T 11-10-2018 APH_0231 303cdacb04be3d1f5caa580828895c54 510 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 344 351 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 SUPERFAMILY SSF53187 179 498 3.14E-115 T 11-10-2018 APH_0231 303cdacb04be3d1f5caa580828895c54 510 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 491 4.1E-119 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 Gene3D G3DSA:3.40.630.10 167 501 4.9E-126 T 11-10-2018 APH_0231 303cdacb04be3d1f5caa580828895c54 510 PRINTS PR00481 Cytosol aminopeptidase signature 340 360 2.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 PRINTS PR00481 Cytosol aminopeptidase signature 318 339 2.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 PRINTS PR00481 Cytosol aminopeptidase signature 259 276 2.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 2.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 PRINTS PR00481 Cytosol aminopeptidase signature 281 302 2.7E-51 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APH_0231 303cdacb04be3d1f5caa580828895c54 510 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 500 32.505 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 APH_0212 1e7994921cff9194fcddc0381449cd1e 176 SUPERFAMILY SSF55083 13 161 1.96E-41 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APH_0212 1e7994921cff9194fcddc0381449cd1e 176 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 15 144 4.8E-32 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APH_0212 1e7994921cff9194fcddc0381449cd1e 176 Gene3D G3DSA:3.30.70.560 12 171 1.9E-45 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 APH_1325 c92bf80f32963c4bea1afa06b48d05b4 416 Gene3D G3DSA:2.40.160.20 223 383 4.5E-6 T 11-10-2018 APH_1325 c92bf80f32963c4bea1afa06b48d05b4 416 SUPERFAMILY SSF56925 241 374 6.28E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1325 c92bf80f32963c4bea1afa06b48d05b4 416 Pfam PF01617 Surface antigen 39 414 1.5E-50 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 217 2.2E-21 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 6.4E-33 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 SUPERFAMILY SSF46946 131 220 4.32E-24 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 Pfam PF06827 Zinc finger found in FPG and IleRS 240 268 1.2E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 SMART SM01232 130 220 4.2E-38 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 Gene3D G3DSA:3.20.190.10 1 130 7.7E-36 T 11-10-2018 IPR035937 MutM-like, N-terminal APH_0411 d049a31926a0faf336d8c61aa07caf09 268 SUPERFAMILY SSF57716 216 268 5.99E-15 T 11-10-2018 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 SMART SM00898 2 116 1.7E-41 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 SUPERFAMILY SSF81624 2 139 1.96E-35 T 11-10-2018 IPR035937 MutM-like, N-terminal APH_0411 d049a31926a0faf336d8c61aa07caf09 268 Gene3D G3DSA:1.10.8.50 132 268 3.2E-43 T 11-10-2018 APH_0411 d049a31926a0faf336d8c61aa07caf09 268 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APH_0530 df433d752aae8ec56b116f26faff4c77 79 Gene3D G3DSA:3.20.20.140 2 69 2.9E-15 T 11-10-2018 APH_0530 df433d752aae8ec56b116f26faff4c77 79 Pfam PF01026 TatD related DNase 9 61 4.6E-12 T 11-10-2018 IPR001130 TatD family GO:0016788 APH_0530 df433d752aae8ec56b116f26faff4c77 79 SUPERFAMILY SSF51556 9 62 6.8E-14 T 11-10-2018 IPR032466 Metal-dependent hydrolase APH_0122 c83189cdcf88b6c2ce4890eaae2d5154 248 Gene3D G3DSA:3.40.30.10 72 247 1.8E-33 T 11-10-2018 APH_0122 c83189cdcf88b6c2ce4890eaae2d5154 248 Pfam PF13462 Thioredoxin 83 240 1.7E-18 T 11-10-2018 IPR012336 Thioredoxin-like fold APH_0122 c83189cdcf88b6c2ce4890eaae2d5154 248 SUPERFAMILY SSF52833 76 240 1.72E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1263 bc253a4cc50754483537fbaf0eea7a26 172 SUPERFAMILY SSF54364 5 73 8.63E-21 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APH_1263 bc253a4cc50754483537fbaf0eea7a26 172 Gene3D G3DSA:3.30.110.10 77 169 7.0E-29 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 APH_1263 bc253a4cc50754483537fbaf0eea7a26 172 SUPERFAMILY SSF55200 84 165 1.26E-26 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 APH_1263 bc253a4cc50754483537fbaf0eea7a26 172 Gene3D G3DSA:3.10.20.80 3 76 3.8E-22 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APH_1263 bc253a4cc50754483537fbaf0eea7a26 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 8 73 1.3E-20 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 APH_1263 bc253a4cc50754483537fbaf0eea7a26 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 83 165 2.7E-29 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 SUPERFAMILY SSF118215 18 389 7.59E-77 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 Gene3D G3DSA:1.10.3860.10 2 395 4.3E-75 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 216 235 1.5E-20 T 11-10-2018 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 344 364 1.5E-20 T 11-10-2018 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 317 336 1.5E-20 T 11-10-2018 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 69 94 1.5E-20 T 11-10-2018 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 282 308 1.5E-20 T 11-10-2018 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.5E-20 T 11-10-2018 APH_0424 8e24085ddfad7abb65d13c20c00d239f 396 Pfam PF00375 Sodium:dicarboxylate symporter family 7 388 2.2E-75 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 Gene3D G3DSA:3.30.565.10 563 700 1.2E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 SMART SM00387 592 700 1.1E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 SMART SM00304 309 364 1.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 SUPERFAMILY SSF55874 572 694 2.51E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 SMART SM00388 481 552 8.8E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 Gene3D G3DSA:1.20.1480.50 269 371 6.6E-6 T 11-10-2018 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 681 1.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 662 1.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 648 1.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 SUPERFAMILY SSF47384 477 552 5.49E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 Gene3D G3DSA:1.10.287.130 471 549 6.3E-11 T 11-10-2018 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 696 9.7E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 550 1.2E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APH_0136 be0b358cd0f0a41304571a7e8fe02c93 700 PIRSF PIRSF037532 7 700 1.0E-173 T 11-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 Gene3D G3DSA:3.50.30.20 5 151 7.5E-47 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 Gene3D G3DSA:3.40.50.880 166 365 5.8E-36 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 SUPERFAMILY SSF52317 170 361 5.33E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 335 348 2.5E-12 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 261 2.5E-12 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 221 230 2.5E-12 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 250 266 8.6E-32 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 292 303 8.6E-32 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 218 232 8.6E-32 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 178 192 8.6E-32 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 284 8.6E-32 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 SMART SM01097 6 135 1.2E-67 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00097 Anthranilate synthase component II signature 335 348 4.7E-8 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00097 Anthranilate synthase component II signature 221 230 4.7E-8 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 PRINTS PR00097 Anthranilate synthase component II signature 250 261 4.7E-8 T 11-10-2018 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 Pfam PF00117 Glutamine amidotransferase class-I 180 357 8.6E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 134 1.1E-42 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 SUPERFAMILY SSF52021 6 146 2.35E-48 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0381 b4feadad2eb8812555974d68cf23c3c8 365 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 364 40.974 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 APH_0151 8fb3e44ebe3ff54ae84ca704824a72cf 109 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 16.61 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_0151 8fb3e44ebe3ff54ae84ca704824a72cf 109 Pfam PF01250 Ribosomal protein S6 4 92 7.2E-21 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0151 8fb3e44ebe3ff54ae84ca704824a72cf 109 Gene3D G3DSA:3.30.70.60 1 100 1.6E-21 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APH_0151 8fb3e44ebe3ff54ae84ca704824a72cf 109 SUPERFAMILY SSF54995 2 104 2.49E-27 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0979 37ec956472eabe3ddc0adc5414d6b1bc 273 Gene3D G3DSA:3.90.1150.10 174 264 8.3E-16 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0979 37ec956472eabe3ddc0adc5414d6b1bc 273 Gene3D G3DSA:3.40.640.10 1 173 2.8E-57 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0979 37ec956472eabe3ddc0adc5414d6b1bc 273 SUPERFAMILY SSF53383 1 261 1.26E-63 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0979 37ec956472eabe3ddc0adc5414d6b1bc 273 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 123 132 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 APH_0979 37ec956472eabe3ddc0adc5414d6b1bc 273 Pfam PF00155 Aminotransferase class I and II 1 258 4.6E-34 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_0527 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0527 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 SUPERFAMILY SSF51366 2 226 1.14E-62 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 APH_0527 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 Gene3D G3DSA:3.20.20.70 1 228 2.9E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0527 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 SMART SM00934 6 224 1.3E-74 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0527 8a7a26b5fb8f6ed6c4788fec5c0636c0 228 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 223 1.2E-37 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0707 4122605e60a1391beac7508644031d77 285 SUPERFAMILY SSF52943 2 284 1.57E-60 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0707 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 66 85 9.7E-24 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0707 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 231 250 9.7E-24 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0707 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 158 175 9.7E-24 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0707 4122605e60a1391beac7508644031d77 285 PRINTS PR00126 ATP synthase gamma subunit signature 262 283 9.7E-24 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0707 4122605e60a1391beac7508644031d77 285 Pfam PF00231 ATP synthase 5 284 2.0E-58 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0707 4122605e60a1391beac7508644031d77 285 Gene3D G3DSA:3.40.1380.10 27 243 7.9E-58 T 11-10-2018 APH_0707 4122605e60a1391beac7508644031d77 285 Gene3D G3DSA:1.10.287.80 5 283 7.9E-58 T 11-10-2018 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 SUPERFAMILY SSF56553 54 182 2.49E-30 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 265 334 4.0E-35 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 260 316 4.8E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 30 232 1.2E-21 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Gene3D G3DSA:3.30.1360.10 24 232 1.4E-68 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 SUPERFAMILY SSF55257 19 235 5.1E-26 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 155 5.6E-14 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 325 32.766 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 SUPERFAMILY SSF47789 259 334 6.28E-27 T 11-10-2018 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Gene3D G3DSA:1.10.150.20 256 337 5.5E-36 T 11-10-2018 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 Gene3D G3DSA:2.170.120.12 54 181 1.4E-68 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0303 a6e3638b1a65859f98f8e483be8cd50b 344 SMART SM00662 24 238 1.4E-56 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1281 1ccf1689bb93e75460e8c9edaeef1e49 106 SMART SM00411 13 102 1.5E-13 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_1281 1ccf1689bb93e75460e8c9edaeef1e49 106 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 58 77 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APH_1281 1ccf1689bb93e75460e8c9edaeef1e49 106 Gene3D G3DSA:4.10.520.10 11 105 1.8E-20 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 APH_1281 1ccf1689bb93e75460e8c9edaeef1e49 106 Pfam PF00216 Bacterial DNA-binding protein 13 102 1.2E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_1281 1ccf1689bb93e75460e8c9edaeef1e49 106 SUPERFAMILY SSF47729 13 103 4.12E-21 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 APH_0572 2bea21042bbf9165786344385b6a7564 134 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 80 96 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_0572 2bea21042bbf9165786344385b6a7564 134 SMART SM00534 1 134 6.1E-53 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_0572 2bea21042bbf9165786344385b6a7564 134 Pfam PF00488 MutS domain V 3 130 7.4E-63 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_0572 2bea21042bbf9165786344385b6a7564 134 SUPERFAMILY SSF52540 2 133 3.66E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0572 2bea21042bbf9165786344385b6a7564 134 Gene3D G3DSA:3.40.50.300 1 133 9.2E-63 T 11-10-2018 APH_0070 c0729d0cfa2284c1ddb28b8c91a6b701 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 4.3E-94 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 APH_0070 c0729d0cfa2284c1ddb28b8c91a6b701 261 SUPERFAMILY SSF110399 2 241 1.44E-76 T 11-10-2018 APH_0070 c0729d0cfa2284c1ddb28b8c91a6b701 261 Gene3D G3DSA:3.20.20.70 1 261 2.7E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 2 186 21.682 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Pfam PF01256 Carbohydrate kinase 229 439 2.2E-44 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 196 457 15.038 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Pfam PF03853 YjeF-related protein N-terminus 97 165 1.9E-21 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Pfam PF03853 YjeF-related protein N-terminus 22 79 8.6E-11 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Gene3D G3DSA:3.40.50.10260 5 190 1.2E-48 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 SUPERFAMILY SSF64153 4 217 3.01E-48 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 PIRSF PIRSF017184 90 459 3.6E-79 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 PIRSF PIRSF017184 10 84 6.9E-12 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 Gene3D G3DSA:3.40.1190.20 199 458 2.1E-56 T 11-10-2018 IPR029056 Ribokinase-like APH_0588 ad1a47f8ee2aacfb9cb0ad0d199ff6a9 459 SUPERFAMILY SSF53613 195 456 5.77E-50 T 11-10-2018 IPR029056 Ribokinase-like APH_0302 b00addddd44dc2a40ef17b5189d3adba 124 PIRSF PIRSF002131 1 124 3.9E-43 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_0302 b00addddd44dc2a40ef17b5189d3adba 124 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 124 28.633 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_0302 b00addddd44dc2a40ef17b5189d3adba 124 SUPERFAMILY SSF53137 7 124 2.03E-39 T 11-10-2018 APH_0302 b00addddd44dc2a40ef17b5189d3adba 124 Gene3D G3DSA:3.30.420.80 1 124 1.4E-42 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0302 b00addddd44dc2a40ef17b5189d3adba 124 Pfam PF00411 Ribosomal protein S11 13 123 2.5E-38 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APH_1017 e0bbb7d7ce1560a2e35982c628bfcf06 423 SUPERFAMILY SSF56925 113 423 2.04E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1017 e0bbb7d7ce1560a2e35982c628bfcf06 423 Pfam PF01617 Surface antigen 53 423 3.9E-61 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1017 e0bbb7d7ce1560a2e35982c628bfcf06 423 Gene3D G3DSA:2.40.160.20 252 385 9.8E-8 T 11-10-2018 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Gene3D G3DSA:3.30.565.10 2 223 3.9E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Pfam PF00183 Hsp90 protein 215 632 1.9E-103 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 93 110 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 26 48 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 120 142 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 5 25 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PRINTS PR00775 90kDa heat shock protein signature 75 92 1.9E-54 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Gene3D G3DSA:1.20.120.790 495 631 4.1E-30 T 11-10-2018 IPR037196 HSP90, C-terminal domain APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 631 28.717 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Gene3D G3DSA:3.40.50.11260 396 487 2.2E-25 T 11-10-2018 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 182 9.1E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SUPERFAMILY SSF54211 224 476 1.29E-83 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 PIRSF PIRSF002583 2 637 5.1E-199 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 Gene3D G3DSA:3.30.230.80 224 395 2.3E-58 T 11-10-2018 APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SUPERFAMILY SSF110942 515 631 2.35E-28 T 11-10-2018 IPR037196 HSP90, C-terminal domain APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SMART SM00387 27 183 0.0013 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase APH_0893 f7081d16ba52e6fff9bfc89ccb43e6b5 637 SUPERFAMILY SSF55874 5 213 1.38E-62 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0447 6d0d338c77d30c01a9f547803cc42029 118 Pfam PF02033 Ribosome-binding factor A 11 112 1.7E-19 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 APH_0447 6d0d338c77d30c01a9f547803cc42029 118 Gene3D G3DSA:3.30.300.20 8 118 5.3E-21 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta APH_0447 6d0d338c77d30c01a9f547803cc42029 118 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 100 6.0E-30 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 APH_0447 6d0d338c77d30c01a9f547803cc42029 118 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 113 22.215 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 APH_0447 6d0d338c77d30c01a9f547803cc42029 118 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APH_0447 6d0d338c77d30c01a9f547803cc42029 118 SUPERFAMILY SSF89919 10 115 1.83E-23 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 Gene3D G3DSA:3.30.70.20 2 121 1.7E-25 T 11-10-2018 APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 SUPERFAMILY SSF54862 3 97 1.77E-23 T 11-10-2018 APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.2E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.2E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.2E-17 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 Pfam PF00037 4Fe-4S binding domain 34 55 6.4E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APH_0027 1e9aa8181a34470a8a324fd3673d786b 126 Pfam PF11953 Domain of unknown function (DUF3470) 81 119 1.2E-11 T 11-10-2018 IPR022569 Ferredoxin, C-terminal APH_0370 1ae2b8b65b9d921fd509beacbd1d2fef 448 Pfam PF11812 Domain of unknown function (DUF3333) 54 165 6.7E-14 T 11-10-2018 IPR024573 Domain of unknown function DUF3333 APH_0370 1ae2b8b65b9d921fd509beacbd1d2fef 448 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 245 444 8.1E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 APH_0370 1ae2b8b65b9d921fd509beacbd1d2fef 448 Gene3D G3DSA:1.10.3720.10 220 445 1.7E-31 T 11-10-2018 IPR035906 MetI-like superfamily APH_0370 1ae2b8b65b9d921fd509beacbd1d2fef 448 SUPERFAMILY SSF161098 207 432 6.54E-33 T 11-10-2018 IPR035906 MetI-like superfamily APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 8.7E-32 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 Gene3D G3DSA:3.50.50.60 7 333 1.0E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 SUPERFAMILY SSF51905 2 342 1.81E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.5E-70 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PIRSF PIRSF000350 1 449 2.5E-69 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 Gene3D G3DSA:3.30.390.30 351 468 8.3E-36 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 5.6E-58 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.0E-39 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.0E-39 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.0E-39 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 2.0E-39 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.0E-39 T 11-10-2018 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 SUPERFAMILY SSF55424 348 463 4.98E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 Gene3D G3DSA:3.50.50.60 155 277 1.0E-99 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0393 8782b8bacad3259a7ff16ed833002aaf 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APH_0528 4f426e7061bb0b975a9be3ea3f4ee3e6 270 PIRSF PIRSF005902 1 256 1.7E-70 T 11-10-2018 IPR001130 TatD family GO:0016788 APH_0528 4f426e7061bb0b975a9be3ea3f4ee3e6 270 Pfam PF01026 TatD related DNase 3 252 4.0E-68 T 11-10-2018 IPR001130 TatD family GO:0016788 APH_0528 4f426e7061bb0b975a9be3ea3f4ee3e6 270 SUPERFAMILY SSF51556 2 253 1.59E-76 T 11-10-2018 IPR032466 Metal-dependent hydrolase APH_0528 4f426e7061bb0b975a9be3ea3f4ee3e6 270 Gene3D G3DSA:3.20.20.140 1 259 2.3E-77 T 11-10-2018 APH_0528 4f426e7061bb0b975a9be3ea3f4ee3e6 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 13 82 4.2E-18 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 140 360 3.4E-60 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 SMART SM00382 152 399 5.0E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 SUPERFAMILY SSF52540 86 364 1.24E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 Gene3D G3DSA:2.40.10.170 7 84 3.2E-27 T 11-10-2018 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 Gene3D G3DSA:3.40.50.300 85 362 4.1E-112 T 11-10-2018 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 SUPERFAMILY SSF50615 10 84 1.28E-22 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 SUPERFAMILY SSF47917 364 478 3.92E-50 T 11-10-2018 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 Hamap MF_01347 ATP synthase subunit beta [atpB]. 8 478 55.499 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 APH_0494 0c866db6d5c31685a7bf120bee1e251d 479 Gene3D G3DSA:1.10.1140.10 363 479 3.3E-54 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 36 54 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 123 139 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 233 254 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 351 369 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 99 118 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 54 68 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 141 158 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 PRINTS PR00681 Ribosomal protein S1 signature 311 330 5.9E-56 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 Pfam PF00575 S1 RNA binding domain 123 186 9.5E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 APH_0273 797350ae5bb1440957494183158f819e 542 Pfam PF00575 S1 RNA binding domain 204 281 9.7E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 APH_0273 797350ae5bb1440957494183158f819e 542 Pfam PF00575 S1 RNA binding domain 296 368 8.7E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 APH_0273 797350ae5bb1440957494183158f819e 542 Pfam PF00575 S1 RNA binding domain 33 101 7.0E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 APH_0273 797350ae5bb1440957494183158f819e 542 Pfam PF00575 S1 RNA binding domain 381 460 8.8E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 APH_0273 797350ae5bb1440957494183158f819e 542 Gene3D G3DSA:2.40.50.140 27 112 1.2E-12 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 Gene3D G3DSA:2.40.50.140 202 289 2.5E-27 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 SUPERFAMILY SSF50249 32 127 1.07E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0273 797350ae5bb1440957494183158f819e 542 SUPERFAMILY SSF50249 204 298 1.5E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0273 797350ae5bb1440957494183158f819e 542 SUPERFAMILY SSF50249 276 389 3.5E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0273 797350ae5bb1440957494183158f819e 542 SMART SM00316 475 542 2.7 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0273 797350ae5bb1440957494183158f819e 542 SMART SM00316 383 460 4.6E-8 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0273 797350ae5bb1440957494183158f819e 542 SMART SM00316 118 186 1.4E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0273 797350ae5bb1440957494183158f819e 542 SMART SM00316 205 281 1.9E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0273 797350ae5bb1440957494183158f819e 542 SMART SM00316 296 368 1.3E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0273 797350ae5bb1440957494183158f819e 542 SMART SM00316 34 102 4.4E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0273 797350ae5bb1440957494183158f819e 542 Gene3D G3DSA:2.40.50.140 290 378 4.9E-27 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 Gene3D G3DSA:2.40.50.140 379 472 4.1E-16 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 Gene3D G3DSA:2.40.50.140 113 200 4.9E-6 T 11-10-2018 APH_0273 797350ae5bb1440957494183158f819e 542 SUPERFAMILY SSF50249 123 198 2.98E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0273 797350ae5bb1440957494183158f819e 542 SUPERFAMILY SSF50249 368 465 5.3E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 PIRSF PIRSF002401 1 349 4.9E-126 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 Pfam PF01926 50S ribosome-binding GTPase 161 280 2.2E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 Gene3D G3DSA:2.70.210.12 1 158 1.1E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 SUPERFAMILY SSF82051 3 158 3.27E-52 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 SUPERFAMILY SSF52540 154 308 1.06E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 Hamap MF_01454 GTPase Obg [obg]. 2 325 43.907 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 Pfam PF01018 GTP1/OBG 4 158 1.9E-55 T 11-10-2018 IPR006169 GTP1/OBG domain APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 Gene3D G3DSA:3.40.50.300 160 347 1.5E-45 T 11-10-2018 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 8.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0694 ef4e4efd390fa1cf94d59c7be6d19456 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 8.8E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 588 614 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.10.10 544 627 7.2E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 SUPERFAMILY SSF88659 525 624 2.62E-24 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04545 Sigma-70, region 4 562 616 1.3E-18 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 418 431 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04546 Sigma-70, non-essential region 139 361 2.8E-24 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04539 Sigma-70 region 3 473 549 2.1E-23 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 SUPERFAMILY SSF88946 114 461 3.14E-80 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 SUPERFAMILY SSF88659 467 540 6.54E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF00140 Sigma-70 factor, region 1.2 97 125 4.4E-9 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 625 35.591 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF04542 Sigma-70 region 2 394 463 7.6E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.10.10 467 542 1.6E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.601.10 112 463 3.0E-92 T 11-10-2018 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Pfam PF03979 Sigma-70 factor, region 1.1 8 84 1.9E-15 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 Gene3D G3DSA:1.10.220.120 6 67 5.6E-13 T 11-10-2018 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 442 450 4.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 418 431 4.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 566 578 4.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 603 614 4.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0576 f5aa4d230b5d3cc0de13e10da5feccd0 627 PRINTS PR00046 Major sigma-70 factor signature 588 603 4.4E-30 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_1216 4880cba1a5da68e0c7cf4a3416f4df0d 409 Gene3D G3DSA:3.30.460.10 2 144 1.8E-41 T 11-10-2018 APH_1216 4880cba1a5da68e0c7cf4a3416f4df0d 409 SUPERFAMILY SSF81891 146 402 2.88E-41 T 11-10-2018 APH_1216 4880cba1a5da68e0c7cf4a3416f4df0d 409 SUPERFAMILY SSF81301 10 144 2.4E-38 T 11-10-2018 APH_1216 4880cba1a5da68e0c7cf4a3416f4df0d 409 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 179 234 6.8E-8 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 APH_1216 4880cba1a5da68e0c7cf4a3416f4df0d 409 Pfam PF01743 Poly A polymerase head domain 26 146 2.2E-28 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 APH_1216 4880cba1a5da68e0c7cf4a3416f4df0d 409 Gene3D G3DSA:1.10.3090.10 145 336 1.2E-30 T 11-10-2018 APH_1146 55b0483239466a5f528a24ead8a8d6dc 368 Gene3D G3DSA:3.30.479.30 134 240 9.1E-18 T 11-10-2018 APH_1146 55b0483239466a5f528a24ead8a8d6dc 368 SMART SM00244 72 249 1.8E-23 T 11-10-2018 IPR001107 Band 7 domain APH_1146 55b0483239466a5f528a24ead8a8d6dc 368 Pfam PF01145 SPFH domain / Band 7 family 76 262 1.4E-22 T 11-10-2018 IPR001107 Band 7 domain APH_1146 55b0483239466a5f528a24ead8a8d6dc 368 SUPERFAMILY SSF117892 140 255 2.35E-18 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily APH_0259 5cb0cff667479aada27711b5bf57f3fb 239 Pfam PF13637 Ankyrin repeats (many copies) 162 208 1.1E-9 T 11-10-2018 APH_0259 5cb0cff667479aada27711b5bf57f3fb 239 SUPERFAMILY SSF48403 125 227 2.76E-15 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0259 5cb0cff667479aada27711b5bf57f3fb 239 SMART SM00248 158 187 79.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0259 5cb0cff667479aada27711b5bf57f3fb 239 SMART SM00248 191 220 0.0017 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0259 5cb0cff667479aada27711b5bf57f3fb 239 Gene3D G3DSA:1.25.40.20 114 229 1.4E-14 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0520 8ae8d0e989dd442ed6ec19900f3deb3d 174 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 6 165 40.525 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0520 8ae8d0e989dd442ed6ec19900f3deb3d 174 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 51 159 8.8E-25 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0520 8ae8d0e989dd442ed6ec19900f3deb3d 174 Gene3D G3DSA:3.40.50.12280 5 173 3.0E-77 T 11-10-2018 APH_0520 8ae8d0e989dd442ed6ec19900f3deb3d 174 SUPERFAMILY SSF56770 28 167 1.44E-65 T 11-10-2018 APH_0520 8ae8d0e989dd442ed6ec19900f3deb3d 174 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 132 148 - T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1173 b3e8e2a25a8c39231ea54cb7f0f98b2d 204 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 204 21.858 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_1173 b3e8e2a25a8c39231ea54cb7f0f98b2d 204 Pfam PF00156 Phosphoribosyl transferase domain 59 167 1.7E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APH_1173 b3e8e2a25a8c39231ea54cb7f0f98b2d 204 SUPERFAMILY SSF53271 12 160 9.05E-33 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like APH_1173 b3e8e2a25a8c39231ea54cb7f0f98b2d 204 Gene3D G3DSA:3.40.50.2020 12 201 3.5E-47 T 11-10-2018 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 PIRSF PIRSF036684 2 750 0.0 T 11-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Pfam PF03949 Malic enzyme, NAD binding domain 167 358 6.6E-20 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Pfam PF00390 Malic enzyme, N-terminal domain 22 152 1.1E-23 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.10750 572 722 3.9E-80 T 11-10-2018 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.10380 2 162 1.9E-63 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SUPERFAMILY SSF51735 165 444 2.77E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Pfam PF01515 Phosphate acetyl/butaryl transferase 432 744 1.1E-73 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SUPERFAMILY SSF53659 432 747 2.88E-75 T 11-10-2018 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SMART SM01274 20 153 1.3E-74 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.10950 445 745 3.9E-80 T 11-10-2018 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SMART SM00919 165 402 1.2E-130 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 SUPERFAMILY SSF53223 12 163 3.67E-51 T 11-10-2018 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 Gene3D G3DSA:3.40.50.720 163 442 1.1E-77 T 11-10-2018 APH_0042 0e4fc5514c96bfd80ec72e0b0a20e78b 751 ProSitePatterns PS00331 Malic enzymes signature. 161 177 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APH_0444 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 2.1E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.1E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 2.1E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.1E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 2.1E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 2.1E-30 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82866 288 488 5.23E-40 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.70.1320 135 324 2.1E-214 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Pfam PF00873 AcrB/AcrD/AcrF family 5 1018 1.6E-152 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_0444 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82693 136 322 1.92E-11 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82693 41 134 8.11E-18 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:1.20.1640.10 506 1018 2.1E-214 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.70.1430 41 802 2.1E-214 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82866 794 1024 1.31E-33 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.2090.10 177 267 2.1E-214 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.70.1430 562 655 2.1E-214 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.2090.10 706 794 2.1E-214 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:1.20.1640.10 11 505 2.1E-214 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 Gene3D G3DSA:3.30.70.1440 656 849 2.1E-214 T 11-10-2018 APH_0444 f7101b332a365fe663984b4bac883f71 1032 SUPERFAMILY SSF82714 182 262 1.96E-7 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APH_1111 ad8cb815c88340caf90c210fe879fc46 342 SUPERFAMILY SSF52540 87 308 1.66E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1111 ad8cb815c88340caf90c210fe879fc46 342 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 336 1.1E-82 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 APH_1111 ad8cb815c88340caf90c210fe879fc46 342 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 337 31.841 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein APH_1111 ad8cb815c88340caf90c210fe879fc46 342 Gene3D G3DSA:3.40.50.300 82 324 1.5E-65 T 11-10-2018 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 SUPERFAMILY SSF57783 9 99 2.21E-28 T 11-10-2018 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 SUPERFAMILY SSF56731 112 415 1.96E-79 T 11-10-2018 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF13662 Toprim domain 249 313 6.7E-14 T 11-10-2018 IPR006171 TOPRIM domain APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 240 4.1E-30 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal APH_0571 da52fbafe26adb4900ea11cd0436c075 607 PIRSF PIRSF002811 3 602 1.8E-169 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Hamap MF_00974 DNA primase [dnaG]. 5 602 22.663 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 SMART SM00400 38 92 7.2E-26 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF01807 CHC2 zinc finger 10 101 8.1E-31 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.90.580.10 4 103 4.9E-32 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.90.980.10 107 229 3.6E-27 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily APH_0571 da52fbafe26adb4900ea11cd0436c075 607 SMART SM00493 248 319 5.8E-13 T 11-10-2018 IPR006171 TOPRIM domain APH_0571 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.40.1360.10 230 355 3.1E-31 T 11-10-2018 APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 SUPERFAMILY SSF50998 82 397 7.06E-46 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 Gene3D G3DSA:2.130.10.10 69 406 4.4E-46 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 Pfam PF13360 PQQ-like domain 95 329 4.1E-42 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 SMART SM00564 262 293 22.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 SMART SM00564 126 157 2.6 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 SMART SM00564 299 331 110.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 SMART SM00564 166 199 49.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_0392 1276283ef24f11f1e01ccb79f0e4de50 407 SMART SM00564 82 114 70.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APH_1404 7cc3ae38876196bd55056f10d72ff63c 434 Gene3D G3DSA:1.10.1200.160 376 407 6.3E-39 T 11-10-2018 APH_1404 7cc3ae38876196bd55056f10d72ff63c 434 Gene3D G3DSA:2.40.128.260 232 426 6.3E-39 T 11-10-2018 APH_1404 7cc3ae38876196bd55056f10d72ff63c 434 Pfam PF03743 Bacterial conjugation TrbI-like protein 230 428 7.0E-47 T 11-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI APH_0770 a3f2557343c0b9d6f460287297b952b0 344 Gene3D G3DSA:3.30.420.40 153 318 3.3E-122 T 11-10-2018 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 Gene3D G3DSA:3.90.640.10 185 260 3.3E-122 T 11-10-2018 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 Pfam PF06723 MreB/Mbl protein 9 336 1.3E-132 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 Gene3D G3DSA:3.30.420.40 11 329 3.3E-122 T 11-10-2018 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 48 66 1.0E-50 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 301 327 1.0E-50 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 186 206 1.0E-50 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 68 91 1.0E-50 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 131 150 1.0E-50 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 SUPERFAMILY SSF53067 148 334 2.21E-44 T 11-10-2018 APH_0770 a3f2557343c0b9d6f460287297b952b0 344 SUPERFAMILY SSF53067 9 145 6.38E-37 T 11-10-2018 APH_1366 22884285e1172045d41bd24889923a88 508 Gene3D G3DSA:3.30.1360.200 188 319 7.6E-49 T 11-10-2018 APH_1366 22884285e1172045d41bd24889923a88 508 Pfam PF07549 SecD/SecF GG Motif 31 54 2.6E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APH_1366 22884285e1172045d41bd24889923a88 508 Pfam PF02355 Protein export membrane protein 322 487 1.2E-18 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APH_1366 22884285e1172045d41bd24889923a88 508 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_1366 22884285e1172045d41bd24889923a88 508 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 5.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_1366 22884285e1172045d41bd24889923a88 508 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 APH_1366 22884285e1172045d41bd24889923a88 508 SUPERFAMILY SSF82866 298 489 2.75E-39 T 11-10-2018 APH_1366 22884285e1172045d41bd24889923a88 508 Gene3D G3DSA:3.30.70.3400 137 320 7.6E-49 T 11-10-2018 APH_1366 22884285e1172045d41bd24889923a88 508 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 7 503 38.553 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APH_1366 22884285e1172045d41bd24889923a88 508 Gene3D G3DSA:1.20.1640.10 321 494 3.7E-9 T 11-10-2018 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 5.9E-14 T 11-10-2018 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 5.9E-14 T 11-10-2018 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 5.9E-14 T 11-10-2018 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 5.9E-14 T 11-10-2018 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 Gene3D G3DSA:3.30.9.50 79 265 1.8E-72 T 11-10-2018 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 SUPERFAMILY SSF51905 9 388 8.46E-42 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 290 303 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 Pfam PF01494 FAD binding domain 149 308 3.4E-12 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 APH_0009 6a26ed1edcc2ab0bc77bbf8abd1b5804 392 Gene3D G3DSA:3.50.50.60 10 334 1.8E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0166 6e496375c54b9a95686af845e8c272d8 329 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 323 3.0E-26 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APH_0166 6e496375c54b9a95686af845e8c272d8 329 SMART SM00382 51 182 7.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0166 6e496375c54b9a95686af845e8c272d8 329 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 235 3.9E-107 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APH_0166 6e496375c54b9a95686af845e8c272d8 329 SUPERFAMILY SSF46785 257 323 7.07E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily APH_0166 6e496375c54b9a95686af845e8c272d8 329 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 323 9.4E-28 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APH_0166 6e496375c54b9a95686af845e8c272d8 329 Gene3D G3DSA:1.10.8.60 182 255 2.8E-25 T 11-10-2018 APH_0166 6e496375c54b9a95686af845e8c272d8 329 Gene3D G3DSA:1.10.10.10 257 328 1.7E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0166 6e496375c54b9a95686af845e8c272d8 329 SUPERFAMILY SSF52540 20 247 1.7E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0166 6e496375c54b9a95686af845e8c272d8 329 Gene3D G3DSA:3.40.50.300 20 181 7.1E-38 T 11-10-2018 APH_0166 6e496375c54b9a95686af845e8c272d8 329 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 329 141.349 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APH_0433 e103e2fd14f6375383492379be3d3ba6 328 SUPERFAMILY SSF48179 138 233 1.11E-8 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 APH_0433 e103e2fd14f6375383492379be3d3ba6 328 Gene3D G3DSA:1.10.1040.10 133 248 3.6E-7 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APH_1090 0610ee8ae66c8ff0ae654100e8d1c359 124 SMART SM01323 24 109 8.3E-42 T 11-10-2018 IPR003849 Preprotein translocase YajC APH_1090 0610ee8ae66c8ff0ae654100e8d1c359 124 Pfam PF02699 Preprotein translocase subunit 29 106 3.2E-29 T 11-10-2018 IPR003849 Preprotein translocase YajC APH_1090 0610ee8ae66c8ff0ae654100e8d1c359 124 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 1.1E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC APH_1090 0610ee8ae66c8ff0ae654100e8d1c359 124 PRINTS PR01853 Bacterial YajC preprotein translocase signature 46 64 1.1E-14 T 11-10-2018 IPR003849 Preprotein translocase YajC APH_1162 533836051d2b530eabf2600bd41cfdef 80 Pfam PF00462 Glutaredoxin 4 63 5.7E-22 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APH_1162 533836051d2b530eabf2600bd41cfdef 80 SUPERFAMILY SSF52833 1 79 5.99E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1162 533836051d2b530eabf2600bd41cfdef 80 ProSitePatterns PS00195 Glutaredoxin active site. 6 21 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 APH_1162 533836051d2b530eabf2600bd41cfdef 80 Gene3D G3DSA:3.40.30.10 1 80 1.1E-29 T 11-10-2018 APH_1162 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 4 22 2.7E-17 T 11-10-2018 IPR014025 Glutaredoxin subgroup APH_1162 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 60 73 2.7E-17 T 11-10-2018 IPR014025 Glutaredoxin subgroup APH_1162 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 46 59 2.7E-17 T 11-10-2018 IPR014025 Glutaredoxin subgroup APH_1034 07562a5d7e27b0ebc23db161aed3848b 160 SUPERFAMILY SSF47973 2 153 1.1E-46 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily APH_1034 07562a5d7e27b0ebc23db161aed3848b 160 Gene3D G3DSA:1.10.455.10 2 160 6.4E-48 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily APH_1034 07562a5d7e27b0ebc23db161aed3848b 160 PIRSF PIRSF002122 9 160 5.9E-49 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 APH_1034 07562a5d7e27b0ebc23db161aed3848b 160 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 160 29.933 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APH_1034 07562a5d7e27b0ebc23db161aed3848b 160 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_1034 07562a5d7e27b0ebc23db161aed3848b 160 Pfam PF00177 Ribosomal protein S7p/S5e 1 153 1.2E-50 T 11-10-2018 IPR023798 Ribosomal protein S7 domain APH_0814 5184290e6f37660fcae442310f985daf 166 Gene3D G3DSA:3.30.1130.10 64 108 3.8E-12 T 11-10-2018 APH_0814 5184290e6f37660fcae442310f985daf 166 Gene3D G3DSA:3.30.1130.10 109 166 2.4E-8 T 11-10-2018 APH_0814 5184290e6f37660fcae442310f985daf 166 Gene3D G3DSA:1.10.286.10 12 59 1.9E-15 T 11-10-2018 APH_0814 5184290e6f37660fcae442310f985daf 166 SUPERFAMILY SSF55620 12 164 7.34E-40 T 11-10-2018 APH_0814 5184290e6f37660fcae442310f985daf 166 Pfam PF01227 GTP cyclohydrolase I 18 109 7.4E-27 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APH_0814 5184290e6f37660fcae442310f985daf 166 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APH_0104 370b23dbe60e9982b2d4ab3722182afb 97 Gene3D G3DSA:3.40.1160.10 29 97 2.1E-10 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily APH_0104 370b23dbe60e9982b2d4ab3722182afb 97 SUPERFAMILY SSF53633 35 93 5.37E-11 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily APH_0405 b018ec8532d29858637575260efd6317 536 SUPERFAMILY SSF56935 69 484 2.88E-7 T 11-10-2018 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 Gene3D G3DSA:1.10.760.10 28 214 4.6E-80 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 SUPERFAMILY SSF46626 32 213 8.85E-64 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 31 50 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 51 70 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 195 214 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 96 116 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 214 229 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 129 153 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 PRINTS PR00603 Cytochrome C1 signature 175 194 1.2E-60 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0403 d5d264e1ef3b99fa4175cde213db40f2 250 Pfam PF02167 Cytochrome C1 family 33 247 3.7E-95 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 APH_0897 d919aeee619438bd9f2949823fbcc991 209 SUPERFAMILY SSF48150 5 203 1.73E-65 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 APH_0897 d919aeee619438bd9f2949823fbcc991 209 Gene3D G3DSA:1.10.340.30 19 130 9.8E-71 T 11-10-2018 APH_0897 d919aeee619438bd9f2949823fbcc991 209 SMART SM00525 184 204 2.7E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 APH_0897 d919aeee619438bd9f2949823fbcc991 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 166 9.1E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APH_0897 d919aeee619438bd9f2949823fbcc991 209 PIRSF PIRSF001435 1 206 2.1E-45 T 11-10-2018 APH_0897 d919aeee619438bd9f2949823fbcc991 209 Hamap MF_00942 Endonuclease III [nth]. 1 207 34.779 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 APH_0897 d919aeee619438bd9f2949823fbcc991 209 Gene3D G3DSA:1.10.1670.10 12 201 9.8E-71 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 APH_0897 d919aeee619438bd9f2949823fbcc991 209 Pfam PF00633 Helix-hairpin-helix motif 97 125 3.5E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 APH_0897 d919aeee619438bd9f2949823fbcc991 209 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 185 201 3.3E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 APH_0897 d919aeee619438bd9f2949823fbcc991 209 SMART SM00478 36 183 6.5E-53 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 APH_0161 bed56d2574ab876da8e1aec231dba837 604 SUPERFAMILY SSF51905 7 438 1.19E-75 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0161 bed56d2574ab876da8e1aec231dba837 604 SUPERFAMILY SSF46977 461 604 1.7E-48 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0161 bed56d2574ab876da8e1aec231dba837 604 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 51 60 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0161 bed56d2574ab876da8e1aec231dba837 604 Gene3D G3DSA:1.20.58.100 443 554 3.1E-37 T 11-10-2018 APH_0161 bed56d2574ab876da8e1aec231dba837 604 PIRSF PIRSF000171 7 594 5.2E-39 T 11-10-2018 APH_0161 bed56d2574ab876da8e1aec231dba837 604 Pfam PF00890 FAD binding domain 17 415 2.2E-120 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0161 bed56d2574ab876da8e1aec231dba837 604 Gene3D G3DSA:4.10.80.40 555 604 6.5E-11 T 11-10-2018 APH_0161 bed56d2574ab876da8e1aec231dba837 604 Pfam PF02910 Fumarate reductase flavoprotein C-term 470 604 7.8E-44 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0161 bed56d2574ab876da8e1aec231dba837 604 SUPERFAMILY SSF56425 246 364 5.83E-43 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0161 bed56d2574ab876da8e1aec231dba837 604 Gene3D G3DSA:3.90.700.10 256 359 1.7E-168 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0161 bed56d2574ab876da8e1aec231dba837 604 Gene3D G3DSA:3.50.50.60 17 426 1.7E-168 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 Pfam PF00549 CoA-ligase 262 379 1.3E-18 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 40.659 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 PIRSF PIRSF001554 1 387 5.3E-137 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 Gene3D G3DSA:3.30.1490.20 21 104 4.4E-81 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 Gene3D G3DSA:3.40.50.261 240 386 2.3E-53 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 SUPERFAMILY SSF52210 240 384 5.1E-50 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 Gene3D G3DSA:3.30.470.20 2 234 4.4E-81 T 11-10-2018 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 SUPERFAMILY SSF56059 2 236 1.06E-69 T 11-10-2018 APH_1052 7892beeee86dc11b653bc1bd1fd64079 388 Pfam PF08442 ATP-grasp domain 2 203 6.3E-68 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 Hamap MF_00235 Adenylate kinase [adk]. 6 212 33.366 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 85 101 1.1E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 9 22 1.1E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 161 176 1.1E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 PRINTS PR00094 Adenylate kinase signature 38 52 1.1E-24 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 SUPERFAMILY SSF52540 7 213 5.47E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0300 c3c2b68febbf5d53454d497d602fc301 216 Gene3D G3DSA:3.40.50.300 3 216 1.5E-55 T 11-10-2018 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 Pfam PF00406 Adenylate kinase 10 190 1.1E-36 T 11-10-2018 APH_0300 c3c2b68febbf5d53454d497d602fc301 216 ProSitePatterns PS00113 Adenylate kinase signature. 85 96 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 APH_0645 d7734cce8ba82ad992841296ca3fef08 30 Pfam PF06723 MreB/Mbl protein 7 30 6.3E-5 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 3 636 35.966 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Pfam PF00012 Hsp70 protein 6 599 5.9E-259 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 SUPERFAMILY SSF53067 6 181 8.55E-61 T 11-10-2018 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 SUPERFAMILY SSF100934 501 597 1.31E-16 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 SUPERFAMILY SSF100920 378 533 8.76E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 5 18 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 135 155 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 359 379 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 195 205 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 382 401 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 463 479 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 328 344 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 55 63 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 PRINTS PR00301 70kDa heat shock protein signature 33 45 6.9E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Gene3D G3DSA:1.20.1270.10 518 599 7.8E-21 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Gene3D G3DSA:3.30.420.40 177 360 3.3E-152 T 11-10-2018 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 SUPERFAMILY SSF53067 184 376 5.25E-64 T 11-10-2018 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Gene3D G3DSA:3.30.420.40 7 373 3.3E-152 T 11-10-2018 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Gene3D G3DSA:3.90.640.10 222 309 3.3E-152 T 11-10-2018 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 Gene3D G3DSA:2.60.34.10 377 517 8.5E-67 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 9 16 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APH_0346 c391ef1ff2bfb0debd217a170a16b4e6 645 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 189 202 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 APH_0769 3b5e3f41079ffe785d762dc4c7771d05 300 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 173 227 3.1E-13 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 APH_0769 3b5e3f41079ffe785d762dc4c7771d05 300 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 298 17.032 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0769 3b5e3f41079ffe785d762dc4c7771d05 300 SUPERFAMILY SSF55120 2 215 1.27E-68 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0769 3b5e3f41079ffe785d762dc4c7771d05 300 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 26 172 3.4E-48 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APH_0769 3b5e3f41079ffe785d762dc4c7771d05 300 Gene3D G3DSA:3.30.2350.10 1 234 1.5E-76 T 11-10-2018 APH_1061 08752c7ace4946a70ba50f5f26e70631 270 Pfam PF00120 Glutamine synthetase, catalytic domain 53 260 1.6E-39 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_1061 08752c7ace4946a70ba50f5f26e70631 270 SUPERFAMILY SSF55931 1 262 1.03E-51 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 APH_1061 08752c7ace4946a70ba50f5f26e70631 270 SMART SM01230 1 225 9.1E-15 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_1061 08752c7ace4946a70ba50f5f26e70631 270 Gene3D G3DSA:3.30.590.10 1 265 9.0E-48 T 11-10-2018 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:1.10.460.10 139 556 5.0E-162 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF01131 DNA topoisomerase 132 553 2.1E-129 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 SMART SM00436 108 196 1.4E-45 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 598 631 6.2E-11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 SMART SM00493 1 102 4.6E-27 T 11-10-2018 IPR006171 TOPRIM domain APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 727 51.858 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:3.40.50.140 1 138 1.3E-47 T 11-10-2018 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 479 493 7.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 7.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 7.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 7.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 7.4E-34 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 SMART SM00437 250 516 5.5E-118 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:2.70.20.10 188 463 5.0E-162 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 287 309 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Gene3D G3DSA:1.10.290.10 258 393 5.0E-162 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 SUPERFAMILY SSF56712 2 607 6.8E-187 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF01751 Toprim domain 3 116 1.3E-25 T 11-10-2018 IPR006171 TOPRIM domain APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF13368 Topoisomerase C-terminal repeat 707 758 2.3E-10 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 Pfam PF13368 Topoisomerase C-terminal repeat 766 811 5.3E-9 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat APH_0597 fd3b384879aaf5d4de87b827a7d0dda2 811 SUPERFAMILY SSF57783 598 633 8.67E-7 T 11-10-2018 APH_1374 b3cdbb03623dda5244e0f596178f918c 96 Pfam PF01649 Ribosomal protein S20 2 85 1.0E-23 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1374 b3cdbb03623dda5244e0f596178f918c 96 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 89 2.0E-12 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1374 b3cdbb03623dda5244e0f596178f918c 96 Gene3D G3DSA:1.20.58.110 1 87 7.2E-23 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1374 b3cdbb03623dda5244e0f596178f918c 96 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 86 14.845 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1374 b3cdbb03623dda5244e0f596178f918c 96 SUPERFAMILY SSF46992 3 87 2.62E-23 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0230 848cd311f9a8ec32d372122322b33d78 211 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 186 29.994 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 APH_0230 848cd311f9a8ec32d372122322b33d78 211 SUPERFAMILY SSF53328 5 197 5.1E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0230 848cd311f9a8ec32d372122322b33d78 211 Pfam PF00551 Formyl transferase 6 178 1.9E-52 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0230 848cd311f9a8ec32d372122322b33d78 211 Gene3D G3DSA:3.40.50.170 1 211 7.0E-90 T 11-10-2018 APH_1303 49e00ea5ae6c06e67ffeb6fdef97e740 217 Gene3D G3DSA:3.40.50.2020 54 217 1.2E-17 T 11-10-2018 APH_1303 49e00ea5ae6c06e67ffeb6fdef97e740 217 Pfam PF00156 Phosphoribosyl transferase domain 121 213 6.9E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APH_1303 49e00ea5ae6c06e67ffeb6fdef97e740 217 SUPERFAMILY SSF53271 40 214 3.41E-31 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Gene3D G3DSA:3.90.650.10 432 615 2.5E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 213 1001 179.457 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF55326 232 431 4.88E-38 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF56042 826 985 2.09E-22 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Gene3D G3DSA:3.90.650.10 822 991 3.3E-24 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF02769 AIR synthase related protein, C-terminal domain 869 966 3.2E-5 T 11-10-2018 IPR010918 PurM-like, C-terminal domain APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF02769 AIR synthase related protein, C-terminal domain 445 593 4.7E-21 T 11-10-2018 IPR010918 PurM-like, C-terminal domain APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF00586 AIR synthase related protein, N-terminal domain 311 429 1.1E-11 T 11-10-2018 IPR016188 PurM-like, N-terminal domain APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Pfam PF00586 AIR synthase related protein, N-terminal domain 707 793 0.0042 T 11-10-2018 IPR016188 PurM-like, N-terminal domain APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF55326 632 819 7.72E-49 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Gene3D G3DSA:3.30.1330.10 621 814 8.5E-46 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 Gene3D G3DSA:3.30.1330.10 255 431 2.4E-43 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0213 415b192504b4de3dbf2bacbf4a2e9836 1001 SUPERFAMILY SSF56042 443 660 1.12E-46 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_1200 5a00e6ee967d597ca75f9638867fa44a 282 Gene3D G3DSA:3.40.50.150 89 281 4.2E-47 T 11-10-2018 APH_1200 5a00e6ee967d597ca75f9638867fa44a 282 Pfam PF05175 Methyltransferase small domain 115 193 3.9E-10 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 APH_1200 5a00e6ee967d597ca75f9638867fa44a 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APH_1200 5a00e6ee967d597ca75f9638867fa44a 282 Gene3D G3DSA:1.10.8.10 5 88 5.6E-19 T 11-10-2018 APH_1200 5a00e6ee967d597ca75f9638867fa44a 282 SUPERFAMILY SSF53335 10 277 2.98E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 SUPERFAMILY SSF53671 4 300 1.2E-82 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 297 1.2E-22 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 294 7.2E-28 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 257 262 7.2E-28 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 37 59 7.2E-28 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 216 225 7.2E-28 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 84 7.2E-28 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 7.2E-28 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 Gene3D G3DSA:3.40.50.1370 132 278 5.6E-84 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 Gene3D G3DSA:3.40.50.1370 9 295 5.6E-84 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 300 33.968 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 144 2.9E-35 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.5E-14 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.5E-14 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 1.5E-14 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_0503 41578aa2c8661e409d3b3f39d89a4712 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.5E-14 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APH_0508 72c9277c61b4112fc6af482ec57fb90f 55 Pfam PF00444 Ribosomal protein L36 15 54 3.7E-16 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0508 72c9277c61b4112fc6af482ec57fb90f 55 ProSitePatterns PS00828 Ribosomal protein L36 signature. 27 53 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0508 72c9277c61b4112fc6af482ec57fb90f 55 SUPERFAMILY SSF57840 19 54 1.44E-12 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0508 72c9277c61b4112fc6af482ec57fb90f 55 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 29 54 0.006 T 11-10-2018 APH_0508 72c9277c61b4112fc6af482ec57fb90f 55 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 14 54 16.367 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0021 de47b76ad25ffac18bdb17a97d640413 289 Gene3D G3DSA:3.30.465.10 192 287 9.4E-18 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 APH_0021 de47b76ad25ffac18bdb17a97d640413 289 SUPERFAMILY SSF54631 56 186 1.11E-25 T 11-10-2018 APH_0021 de47b76ad25ffac18bdb17a97d640413 289 Gene3D G3DSA:3.10.580.10 54 191 3.1E-45 T 11-10-2018 APH_0021 de47b76ad25ffac18bdb17a97d640413 289 SMART SM01091 199 282 1.3E-19 T 11-10-2018 IPR005170 Transporter-associated domain APH_0021 de47b76ad25ffac18bdb17a97d640413 289 SUPERFAMILY SSF56176 196 279 6.27E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 APH_0021 de47b76ad25ffac18bdb17a97d640413 289 Pfam PF03471 Transporter associated domain 201 280 1.1E-13 T 11-10-2018 IPR005170 Transporter-associated domain APH_0021 de47b76ad25ffac18bdb17a97d640413 289 Pfam PF00571 CBS domain 129 180 1.5E-4 T 11-10-2018 IPR000644 CBS domain APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 SUPERFAMILY SSF55979 259 375 2.83E-26 T 11-10-2018 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 PIRSF PIRSF000804 9 375 3.4E-95 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 SUPERFAMILY SSF55979 10 125 7.59E-23 T 11-10-2018 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 Gene3D G3DSA:3.10.150.10 10 254 8.8E-102 T 11-10-2018 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 Gene3D G3DSA:3.70.10.10 145 373 8.8E-102 T 11-10-2018 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 10 126 5.1E-28 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 SUPERFAMILY SSF55979 134 256 1.46E-25 T 11-10-2018 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 SMART SM00480 25 371 8.3E-92 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 255 3.3E-28 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 APH_1097 fbe63a7103d3b759e0d11f493848fc2b 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 259 374 1.1E-23 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 APH_0274 811a308d84748b70042e4427c3817142 228 SUPERFAMILY SSF52540 14 227 4.17E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0274 811a308d84748b70042e4427c3817142 228 Pfam PF02224 Cytidylate kinase 16 224 1.5E-43 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 APH_0274 811a308d84748b70042e4427c3817142 228 Gene3D G3DSA:3.40.50.300 8 227 2.6E-49 T 11-10-2018 APH_0274 811a308d84748b70042e4427c3817142 228 Hamap MF_00238 Cytidylate kinase [cmk]. 14 228 24.587 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 SUPERFAMILY SSF52954 325 424 4.25E-23 T 11-10-2018 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 Gene3D G3DSA:3.40.50.800 324 426 4.0E-22 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 SUPERFAMILY SSF55681 21 340 8.81E-88 T 11-10-2018 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 Gene3D G3DSA:3.30.930.10 1 323 1.5E-105 T 11-10-2018 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 426 58.897 T 11-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 320 9.1E-39 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0647 b8efbd077b11eec0fb8c73a7a76c772f 426 Pfam PF03129 Anticodon binding domain 337 424 1.8E-13 T 11-10-2018 IPR004154 Anticodon-binding APH_1174 beb013823618fb35a62cf146aefdf8fb 262 SUPERFAMILY SSF69572 3 242 6.15E-80 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 APH_1174 beb013823618fb35a62cf146aefdf8fb 262 Pfam PF00899 ThiF family 5 240 4.3E-65 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APH_1174 beb013823618fb35a62cf146aefdf8fb 262 Gene3D G3DSA:3.40.50.720 1 247 5.7E-82 T 11-10-2018 APH_0002 f807bb40844b81bd75d84bc2a2d82e85 236 PIRSF PIRSF001461 20 236 9.9E-83 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APH_0002 f807bb40844b81bd75d84bc2a2d82e85 236 Pfam PF00834 Ribulose-phosphate 3 epimerase family 25 221 5.5E-72 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APH_0002 f807bb40844b81bd75d84bc2a2d82e85 236 SUPERFAMILY SSF51366 24 235 1.82E-65 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 APH_0002 f807bb40844b81bd75d84bc2a2d82e85 236 Gene3D G3DSA:3.20.20.70 20 235 3.8E-79 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0002 f807bb40844b81bd75d84bc2a2d82e85 236 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 154 176 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 APH_1021 790c692803c08aac672144f37a538f50 147 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 7 128 1.0E-28 T 11-10-2018 IPR020143 Uncharacterised protein family, RP436 APH_0026 2e87ded111972b414858359df4ac5e9d 321 Gene3D G3DSA:3.40.50.10800 90 310 2.3E-108 T 11-10-2018 APH_0026 2e87ded111972b414858359df4ac5e9d 321 Gene3D G3DSA:3.40.50.10800 174 268 2.3E-108 T 11-10-2018 APH_0026 2e87ded111972b414858359df4ac5e9d 321 Gene3D G3DSA:3.40.50.10800 10 293 2.3E-108 T 11-10-2018 APH_0026 2e87ded111972b414858359df4ac5e9d 321 SUPERFAMILY SSF142754 7 312 3.01E-111 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 APH_0026 2e87ded111972b414858359df4ac5e9d 321 Hamap MF_00568 Quinolinate synthase A [nadA]. 6 312 42.558 T 11-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 APH_0026 2e87ded111972b414858359df4ac5e9d 321 Pfam PF02445 Quinolinate synthetase A protein 11 310 3.5E-112 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 APH_0351 1badde3af56066f2c142ae574db56d4f 278 Gene3D G3DSA:3.30.420.10 5 224 4.1E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_0351 1badde3af56066f2c142ae574db56d4f 278 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 52 266 3.5E-77 T 11-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like APH_0351 1badde3af56066f2c142ae574db56d4f 278 SUPERFAMILY SSF53098 45 233 1.75E-32 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0362 9e9de3e68f96b17e0a1109819870856d 324 SUPERFAMILY SSF55174 16 67 1.09E-5 T 11-10-2018 APH_0362 9e9de3e68f96b17e0a1109819870856d 324 Pfam PF00849 RNA pseudouridylate synthase 91 248 2.8E-27 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0362 9e9de3e68f96b17e0a1109819870856d 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0362 9e9de3e68f96b17e0a1109819870856d 324 SUPERFAMILY SSF55120 79 316 5.14E-67 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0362 9e9de3e68f96b17e0a1109819870856d 324 Gene3D G3DSA:3.30.2350.10 84 319 1.6E-66 T 11-10-2018 APH_0362 9e9de3e68f96b17e0a1109819870856d 324 Gene3D G3DSA:3.10.290.10 4 70 7.9E-8 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 SMART SM01230 104 382 9.6E-125 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 SUPERFAMILY SSF54368 6 100 2.35E-30 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 Gene3D G3DSA:3.10.20.70 5 106 5.1E-34 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 Gene3D G3DSA:3.30.590.10 107 460 1.6E-126 T 11-10-2018 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 SUPERFAMILY SSF55931 105 470 1.67E-118 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 Pfam PF00120 Glutamine synthetase, catalytic domain 105 469 1.6E-118 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APH_1246 4167e49c22c6a5747c5ab5351534c6b7 472 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 96 6.8E-26 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Pfam PF00347 Ribosomal protein L6 93 164 5.3E-12 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Pfam PF00347 Ribosomal protein L6 11 80 2.6E-5 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Gene3D G3DSA:3.90.930.12 2 84 8.0E-17 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 SUPERFAMILY SSF56053 85 177 1.18E-28 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 Gene3D G3DSA:3.90.930.12 85 180 2.8E-28 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 SUPERFAMILY SSF56053 2 84 1.25E-13 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PIRSF PIRSF002162 1 180 2.9E-34 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PRINTS PR00059 Ribosomal protein L6 signature 101 117 4.7E-20 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PRINTS PR00059 Ribosomal protein L6 signature 73 98 4.7E-20 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_0295 5a01db48d8de8f5e6f911ccdc160f2ff 180 PRINTS PR00059 Ribosomal protein L6 signature 143 164 4.7E-20 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APH_1290 f93a080d88f97625164ea1c143b111cc 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 4.1E-30 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APH_1290 f93a080d88f97625164ea1c143b111cc 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 148 19.036 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APH_1290 f93a080d88f97625164ea1c143b111cc 154 SUPERFAMILY SSF55486 11 151 3.17E-36 T 11-10-2018 APH_1290 f93a080d88f97625164ea1c143b111cc 154 Gene3D G3DSA:3.40.390.30 4 154 4.7E-35 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 APH_1290 f93a080d88f97625164ea1c143b111cc 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site APH_1288 0180a94f6beee84df545b9000da88ebe 445 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 445 30.548 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 APH_1288 0180a94f6beee84df545b9000da88ebe 445 SUPERFAMILY SSF52540 75 366 5.84E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1288 0180a94f6beee84df545b9000da88ebe 445 SUPERFAMILY SSF116878 122 445 4.18E-46 T 11-10-2018 APH_1288 0180a94f6beee84df545b9000da88ebe 445 Pfam PF01926 50S ribosome-binding GTPase 219 329 8.1E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_1288 0180a94f6beee84df545b9000da88ebe 445 Pfam PF12631 MnmE helical domain 124 442 5.6E-51 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 APH_1288 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:3.40.50.300 218 377 2.4E-101 T 11-10-2018 APH_1288 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:1.20.120.430 123 445 2.4E-101 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 APH_1288 0180a94f6beee84df545b9000da88ebe 445 Gene3D G3DSA:3.30.1360.120 1 122 1.0E-39 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APH_1288 0180a94f6beee84df545b9000da88ebe 445 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 121 3.5E-35 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 APH_0791 34a7c3b1c6dc91c5222c1146d56808a9 178 Gene3D G3DSA:3.40.50.620 2 178 3.3E-33 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0791 34a7c3b1c6dc91c5222c1146d56808a9 178 SUPERFAMILY SSF52374 3 177 1.28E-31 T 11-10-2018 APH_0791 34a7c3b1c6dc91c5222c1146d56808a9 178 Pfam PF01467 Cytidylyltransferase-like 5 176 3.9E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APH_1112 a33a042070a7c8e3b32599f1ea892912 322 SUPERFAMILY SSF53271 68 291 1.07E-38 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like APH_1112 a33a042070a7c8e3b32599f1ea892912 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 127 3.3E-33 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 APH_1112 a33a042070a7c8e3b32599f1ea892912 322 Gene3D G3DSA:3.40.50.2020 6 311 2.4E-90 T 11-10-2018 APH_1112 a33a042070a7c8e3b32599f1ea892912 322 SMART SM01400 1 127 9.7E-38 T 11-10-2018 APH_1112 a33a042070a7c8e3b32599f1ea892912 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 218 311 9.1E-16 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 APH_1112 a33a042070a7c8e3b32599f1ea892912 322 Gene3D G3DSA:3.40.50.2020 154 303 2.4E-90 T 11-10-2018 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 111 123 1.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 95 111 1.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 59 78 1.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 78 95 1.7E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 124 37.765 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 PIRSF PIRSF002133 1 124 2.8E-52 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 SUPERFAMILY SSF50249 2 122 1.71E-48 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 Pfam PF00164 Ribosomal protein S12/S23 13 122 6.6E-39 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1035 1a9a8e5e3fc91432e5a1569a566732af 124 Gene3D G3DSA:2.40.50.140 1 124 3.6E-59 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.270.10 1066 1274 4.3E-81 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.50.100 739 816 1.2E-28 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1100.10 467 646 4.7E-68 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 742 1295 8.4E-148 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1110.10 181 260 6.0E-27 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 SUPERFAMILY SSF64484 29 1375 0.0 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1110.10 343 466 8.2E-28 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1094 1106 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1100.10 32 180 1.9E-50 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1100.10 669 738 3.5E-20 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.270.10 817 856 1.4E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:2.40.50.150 857 977 3.9E-33 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Gene3D G3DSA:3.90.1800.10 1284 1357 8.1E-11 T 11-10-2018 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 538 606 9.3E-32 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 616 681 1.5E-21 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 22 1374 11.762 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 382 479 2.1E-20 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 175 247 3.3E-9 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1372 1.8E-24 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_1024 03dae8b91af1bf17f97079e60190a3c3 1383 Pfam PF04563 RNA polymerase beta subunit 37 519 9.3E-22 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APH_0803 eabb0a82808cc77dc608eb83d952540f 148 SUPERFAMILY SSF89360 9 137 3.14E-18 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 APH_0803 eabb0a82808cc77dc608eb83d952540f 148 Gene3D G3DSA:2.60.300.12 8 148 1.9E-23 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 APH_0803 eabb0a82808cc77dc608eb83d952540f 148 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 144 1.8E-7 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APH_1409 2db69b587c74534f7568584cbf204d4c 371 Gene3D G3DSA:3.40.50.300 13 346 6.5E-67 T 11-10-2018 APH_1409 2db69b587c74534f7568584cbf204d4c 371 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APH_1409 2db69b587c74534f7568584cbf204d4c 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 9 365 3.6E-16 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal APH_1409 2db69b587c74534f7568584cbf204d4c 371 Gene3D G3DSA:1.20.1050.90 125 311 6.5E-67 T 11-10-2018 APH_1409 2db69b587c74534f7568584cbf204d4c 371 SUPERFAMILY SSF52540 12 354 2.04E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1409 2db69b587c74534f7568584cbf204d4c 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 61.563 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SUPERFAMILY SSF47807 170 283 2.69E-27 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 ProSitePatterns PS00447 DNA polymerase family A signature. 679 698 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SUPERFAMILY SSF88723 4 168 9.32E-50 T 11-10-2018 IPR029060 PIN-like domain superfamily APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 168 3.0E-46 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Gene3D G3DSA:3.30.420.10 305 467 1.6E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SMART SM00475 4 260 1.5E-105 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Gene3D G3DSA:3.40.50.1010 8 276 5.5E-86 T 11-10-2018 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SMART SM00482 612 813 1.5E-93 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SUPERFAMILY SSF56672 450 848 1.03E-136 T 11-10-2018 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 738 749 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 604 619 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 581 603 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 656 669 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 649 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 770 786 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 716 727 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 704 2.7E-63 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Pfam PF00476 DNA polymerase family A 475 847 2.6E-136 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Gene3D G3DSA:1.10.150.20 635 777 1.9E-100 T 11-10-2018 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SMART SM00279 171 206 8.3E-12 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Gene3D G3DSA:3.30.70.370 588 845 1.9E-100 T 11-10-2018 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 SUPERFAMILY SSF53098 309 421 2.58E-9 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 169 262 3.0E-26 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Gene3D G3DSA:1.10.150.20 172 245 5.5E-86 T 11-10-2018 APH_0001 ec63665f9d1a22974a13308c4b301f5f 853 Gene3D G3DSA:1.20.1060.10 468 584 5.3E-34 T 11-10-2018 APH_0964 18efa7dc620704939ca95f9afb7494fd 165 Pfam PF01391 Collagen triple helix repeat (20 copies) 7 60 1.8E-9 T 11-10-2018 IPR008160 Collagen triple helix repeat APH_0964 18efa7dc620704939ca95f9afb7494fd 165 Pfam PF01391 Collagen triple helix repeat (20 copies) 66 104 5.0E-9 T 11-10-2018 IPR008160 Collagen triple helix repeat APH_0964 18efa7dc620704939ca95f9afb7494fd 165 Pfam PF01391 Collagen triple helix repeat (20 copies) 104 158 2.8E-9 T 11-10-2018 IPR008160 Collagen triple helix repeat APH_0406 b9a69400cb0fe466258ae75d7ab21d2e 559 Pfam PF13609 Gram-negative porin 66 513 3.8E-11 T 11-10-2018 APH_0406 b9a69400cb0fe466258ae75d7ab21d2e 559 SUPERFAMILY SSF56935 247 559 5.49E-12 T 11-10-2018 APH_0911 b18343bf907dd0f9e9fa5f8bfabf8d27 164 SUPERFAMILY SSF47240 2 131 5.13E-12 T 11-10-2018 IPR009078 Ferritin-like superfamily APH_0911 b18343bf907dd0f9e9fa5f8bfabf8d27 164 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 1 162 4.5E-57 T 11-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 APH_0974 60045d22c772f32fc9b5d8d7ef479e5f 166 Pfam PF04608 Phosphatidylglycerophosphatase A 6 160 4.4E-40 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 APH_0974 60045d22c772f32fc9b5d8d7ef479e5f 166 PIRSF PIRSF006162 1 166 2.7E-45 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 APH_0974 60045d22c772f32fc9b5d8d7ef479e5f 166 SUPERFAMILY SSF101307 5 159 1.19E-29 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Hamap MF_00195 GTPase Der [der]. 1 433 32.834 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Gene3D G3DSA:3.40.50.300 171 349 9.6E-42 T 11-10-2018 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Pfam PF01926 50S ribosome-binding GTPase 3 118 8.4E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Pfam PF01926 50S ribosome-binding GTPase 177 294 3.5E-21 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 PIRSF PIRSF006485 1 438 2.7E-154 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Gene3D G3DSA:3.40.50.300 1 170 1.2E-37 T 11-10-2018 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 SUPERFAMILY SSF52540 3 164 1.14E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Gene3D G3DSA:3.30.300.20 351 432 3.1E-21 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 SUPERFAMILY SSF52540 138 436 2.59E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 9.7E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 9.7E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0390 d5f078e4e042e4ee2a7508f6560a35e9 440 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 430 1.2E-23 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like APH_0306 d501b4c9b7ca079230484755ad79055b 705 Pfam PF13567 Domain of unknown function (DUF4131) 48 199 8.4E-15 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 APH_0306 d501b4c9b7ca079230484755ad79055b 705 Pfam PF03772 Competence protein 241 510 8.9E-55 T 11-10-2018 IPR004477 ComEC/Rec2-related protein APH_0712 930e357ba6bc828b37f99fe493a24b60 692 Gene3D G3DSA:3.10.20.740 1 124 2.8E-40 T 11-10-2018 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 SUPERFAMILY SSF53706 213 630 5.92E-90 T 11-10-2018 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 658 683 8.1E-13 T 11-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 118 4.4E-16 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 SUPERFAMILY SSF54292 2 73 4.71E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 SUPERFAMILY SSF54862 75 211 1.93E-37 T 11-10-2018 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.1E-15 T 11-10-2018 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 SMART SM00929 83 123 7.1E-20 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 11-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 Gene3D G3DSA:3.30.70.20 125 204 1.7E-6 T 11-10-2018 APH_0712 930e357ba6bc828b37f99fe493a24b60 692 Pfam PF00384 Molybdopterin oxidoreductase 271 604 3.7E-63 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 Pfam PF01245 Ribosomal protein L19 13 120 1.0E-38 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 11 40 4.2E-31 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 95 120 4.2E-31 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 41 70 4.2E-31 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 Gene3D G3DSA:2.30.30.790 3 122 1.3E-12 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 PIRSF PIRSF002191 1 128 6.0E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1266 9398c86b18002c746bf982c240ea8c4a 128 SUPERFAMILY SSF50104 13 122 2.61E-38 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily APH_0279 967673b771cbe79c17dac2c1caa24f13 105 Pfam PF00338 Ribosomal protein S10p/S20e 8 101 3.5E-29 T 11-10-2018 IPR027486 Ribosomal protein S10 domain APH_0279 967673b771cbe79c17dac2c1caa24f13 105 SUPERFAMILY SSF54999 5 102 1.96E-31 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily APH_0279 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.1E-10 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0279 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.1E-10 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0279 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.1E-10 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0279 967673b771cbe79c17dac2c1caa24f13 105 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.218 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0279 967673b771cbe79c17dac2c1caa24f13 105 Gene3D G3DSA:3.30.70.600 1 103 1.2E-31 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily APH_0279 967673b771cbe79c17dac2c1caa24f13 105 SMART SM01403 7 101 1.7E-42 T 11-10-2018 IPR027486 Ribosomal protein S10 domain APH_0679 e569bff8cd3fd8c3affade80d7fa3bcc 116 SUPERFAMILY SSF54292 1 104 4.07E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 APH_0679 e569bff8cd3fd8c3affade80d7fa3bcc 116 PRINTS PR00355 Adrenodoxin signature 84 92 8.2E-5 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 APH_0679 e569bff8cd3fd8c3affade80d7fa3bcc 116 PRINTS PR00355 Adrenodoxin signature 39 49 8.2E-5 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 APH_0679 e569bff8cd3fd8c3affade80d7fa3bcc 116 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 APH_0679 e569bff8cd3fd8c3affade80d7fa3bcc 116 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 93 2.8E-12 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APH_0679 e569bff8cd3fd8c3affade80d7fa3bcc 116 Gene3D G3DSA:3.10.20.30 1 115 4.8E-43 T 11-10-2018 IPR012675 Beta-grasp domain superfamily APH_1243 624e161d970ddcece4ce72006774cbfb 414 Pfam PF00155 Aminotransferase class I and II 46 385 1.1E-64 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_1243 624e161d970ddcece4ce72006774cbfb 414 Gene3D G3DSA:3.40.640.10 61 293 7.3E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_1243 624e161d970ddcece4ce72006774cbfb 414 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 APH_1243 624e161d970ddcece4ce72006774cbfb 414 Gene3D G3DSA:3.90.1150.10 16 383 7.3E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_1243 624e161d970ddcece4ce72006774cbfb 414 SUPERFAMILY SSF53383 3 393 1.84E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0730 902b4fd83ce03fa3bc0a31d5c6e45f68 244 Pfam PF00929 Exonuclease 6 165 2.5E-38 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APH_0730 902b4fd83ce03fa3bc0a31d5c6e45f68 244 SMART SM00479 4 174 1.6E-52 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III APH_0730 902b4fd83ce03fa3bc0a31d5c6e45f68 244 SUPERFAMILY SSF53098 2 175 1.66E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0730 902b4fd83ce03fa3bc0a31d5c6e45f68 244 Gene3D G3DSA:3.30.420.10 2 175 5.2E-52 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_1267 648b70fd3417067ace75ea62531aee26 232 Gene3D G3DSA:3.40.1280.10 1 173 2.7E-69 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APH_1267 648b70fd3417067ace75ea62531aee26 232 SUPERFAMILY SSF75217 1 226 1.7E-89 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases APH_1267 648b70fd3417067ace75ea62531aee26 232 PIRSF PIRSF000386 1 232 9.8E-89 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_1267 648b70fd3417067ace75ea62531aee26 232 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 219 5.6E-54 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_1267 648b70fd3417067ace75ea62531aee26 232 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 232 95.857 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_1267 648b70fd3417067ace75ea62531aee26 232 Gene3D G3DSA:1.10.1270.20 174 232 4.3E-29 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APH_1392 9bd1b1921e87c6a24b02694057525900 379 Pfam PF01617 Surface antigen 27 377 4.3E-71 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1392 9bd1b1921e87c6a24b02694057525900 379 SUPERFAMILY SSF56925 27 377 3.4E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1392 9bd1b1921e87c6a24b02694057525900 379 Gene3D G3DSA:2.40.160.20 61 377 2.7E-9 T 11-10-2018 APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 SUPERFAMILY SSF56235 10 250 4.63E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 9 459 43.69 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 SUPERFAMILY SSF53271 246 464 8.98E-66 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 Gene3D G3DSA:3.60.20.10 10 461 7.3E-143 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 Pfam PF13537 Glutamine amidotransferase domain 89 208 1.3E-22 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 Pfam PF00156 Phosphoribosyl transferase domain 287 383 1.1E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 PIRSF PIRSF000485 6 467 1.2E-155 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 APH_1300 ec401f5ed528e11dbb2f7d622cc7a41a 468 Gene3D G3DSA:3.40.50.2020 271 437 7.3E-143 T 11-10-2018 APH_0545 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.40.50.80 899 1027 5.0E-12 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APH_0545 0a22e620241fa397d34357f291e58a12 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 486 504 3.3E-8 T 11-10-2018 APH_0545 0a22e620241fa397d34357f291e58a12 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 540 558 3.3E-8 T 11-10-2018 APH_0545 0a22e620241fa397d34357f291e58a12 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 381 3.3E-8 T 11-10-2018 APH_0545 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.50.50.60 363 498 1.2E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0545 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF51971 360 705 7.65E-20 T 11-10-2018 APH_0545 0a22e620241fa397d34357f291e58a12 1123 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 360 755 2.0E-13 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APH_0545 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF52343 894 1076 1.44E-15 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain APH_0545 0a22e620241fa397d34357f291e58a12 1123 SUPERFAMILY SSF63380 799 898 2.65E-14 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel APH_0545 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:2.40.30.10 799 897 6.3E-15 T 11-10-2018 APH_0545 0a22e620241fa397d34357f291e58a12 1123 Gene3D G3DSA:3.50.50.60 499 560 1.2E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0705 2cb86b6241cdcde8d4463b158fd37942 443 Gene3D G3DSA:3.30.2290.10 2 221 3.8E-56 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal APH_0705 2cb86b6241cdcde8d4463b158fd37942 443 Pfam PF01523 Putative modulator of DNA gyrase 21 312 5.2E-52 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APH_0705 2cb86b6241cdcde8d4463b158fd37942 443 SUPERFAMILY SSF111283 4 442 6.41E-109 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 APH_0402 f33bea1ecd92d41f2161139d60ba1847 408 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 276 377 2.2E-41 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 APH_0402 f33bea1ecd92d41f2161139d60ba1847 408 PIRSF PIRSF038885 8 407 3.6E-194 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 APH_0402 f33bea1ecd92d41f2161139d60ba1847 408 Gene3D G3DSA:1.20.810.10 4 407 2.5E-167 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 APH_0402 f33bea1ecd92d41f2161139d60ba1847 408 Pfam PF00033 Cytochrome b/b6/petB 34 220 3.6E-79 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 APH_0402 f33bea1ecd92d41f2161139d60ba1847 408 SUPERFAMILY SSF81648 279 396 1.68E-43 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 APH_0402 f33bea1ecd92d41f2161139d60ba1847 408 SUPERFAMILY SSF81342 18 278 2.98E-108 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 Gene3D G3DSA:3.40.47.10 268 412 2.9E-54 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 165 181 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 SUPERFAMILY SSF53901 5 263 1.07E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 SMART SM00825 Beta-ketoacyl synthase 7 423 6.9E-16 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 Gene3D G3DSA:3.40.47.10 1 266 1.1E-79 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 256 1.3E-53 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 SUPERFAMILY SSF53901 226 422 4.32E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 PIRSF PIRSF000447 2 423 1.7E-170 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 APH_0930 9221f2eeb19cff4eb0a8d2f471e04033 423 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 266 380 2.8E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal APH_1161 1577de0d073c634b963f59e23a14d5dc 318 Pfam PF06574 FAD synthetase 24 176 1.8E-45 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 APH_1161 1577de0d073c634b963f59e23a14d5dc 318 SUPERFAMILY SSF82114 185 315 1.05E-43 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 APH_1161 1577de0d073c634b963f59e23a14d5dc 318 SMART SM00904 194 318 7.9E-57 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 APH_1161 1577de0d073c634b963f59e23a14d5dc 318 Gene3D G3DSA:2.40.30.30 199 318 5.7E-40 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 APH_1161 1577de0d073c634b963f59e23a14d5dc 318 PIRSF PIRSF004491 13 318 1.3E-100 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 APH_1161 1577de0d073c634b963f59e23a14d5dc 318 Gene3D G3DSA:3.40.50.620 15 198 2.4E-54 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1161 1577de0d073c634b963f59e23a14d5dc 318 Pfam PF01687 Riboflavin kinase 195 315 1.1E-36 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 APH_1161 1577de0d073c634b963f59e23a14d5dc 318 SUPERFAMILY SSF52374 28 186 2.31E-31 T 11-10-2018 APH_0101 740cdd20843f2bf1291736c9ef137d65 423 Gene3D G3DSA:3.30.830.10 6 217 4.0E-66 T 11-10-2018 APH_0101 740cdd20843f2bf1291736c9ef137d65 423 Gene3D G3DSA:3.30.830.10 219 420 2.0E-53 T 11-10-2018 APH_0101 740cdd20843f2bf1291736c9ef137d65 423 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APH_0101 740cdd20843f2bf1291736c9ef137d65 423 SUPERFAMILY SSF63411 7 206 1.26E-56 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_0101 740cdd20843f2bf1291736c9ef137d65 423 SUPERFAMILY SSF63411 222 410 1.75E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_0101 740cdd20843f2bf1291736c9ef137d65 423 Pfam PF05193 Peptidase M16 inactive domain 168 341 1.2E-36 T 11-10-2018 IPR007863 Peptidase M16, C-terminal APH_0101 740cdd20843f2bf1291736c9ef137d65 423 Pfam PF00675 Insulinase (Peptidase family M16) 16 161 7.1E-39 T 11-10-2018 IPR011765 Peptidase M16, N-terminal APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 SUPERFAMILY SSF53098 1 158 5.69E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 Gene3D G3DSA:3.30.420.10 1 159 5.0E-39 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 156 33.469 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 153 3.8E-35 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 141 153 2.6E-19 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 2.6E-19 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 2.6E-19 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 2.6E-19 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0018 7eca4b6c95d973dcd7e6b69f3e168f63 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.6E-19 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APH_0254 0f651b94a77f4cc3088198f53dc89a1c 270 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 44 57 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APH_0254 0f651b94a77f4cc3088198f53dc89a1c 270 SUPERFAMILY SSF51717 7 268 4.71E-75 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APH_0254 0f651b94a77f4cc3088198f53dc89a1c 270 Pfam PF00809 Pterin binding enzyme 12 254 3.9E-64 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APH_0254 0f651b94a77f4cc3088198f53dc89a1c 270 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 10 25 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APH_0254 0f651b94a77f4cc3088198f53dc89a1c 270 Gene3D G3DSA:3.20.20.20 2 270 2.4E-82 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APH_0552 4d0a0a03c8b2ebdfe15ed220f609c8e0 146 Pfam PF02416 mttA/Hcf106 family 4 41 6.5E-5 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APH_0552 4d0a0a03c8b2ebdfe15ed220f609c8e0 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.0E-6 T 11-10-2018 APH_0552 4d0a0a03c8b2ebdfe15ed220f609c8e0 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.0E-6 T 11-10-2018 APH_0041 d04231cbdc2a54d507548f1c127171a7 225 SMART SM00382 31 220 6.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0041 d04231cbdc2a54d507548f1c127171a7 225 Pfam PF00005 ABC transporter 23 170 1.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0041 d04231cbdc2a54d507548f1c127171a7 225 Gene3D G3DSA:3.40.50.300 2 224 5.5E-58 T 11-10-2018 APH_0041 d04231cbdc2a54d507548f1c127171a7 225 SUPERFAMILY SSF52540 5 221 7.04E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0041 d04231cbdc2a54d507548f1c127171a7 225 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_1148 026e3977af52cb6fc26367144880f3a5 490 SMART SM00228 285 367 2.0E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 APH_1148 026e3977af52cb6fc26367144880f3a5 490 SMART SM00228 398 478 9.4E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 APH_1148 026e3977af52cb6fc26367144880f3a5 490 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 394 474 2.1E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 APH_1148 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50156 393 483 1.97E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 APH_1148 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 5.4E-51 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_1148 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 5.4E-51 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_1148 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 5.4E-51 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_1148 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 5.4E-51 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_1148 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 5.4E-51 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_1148 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 5.4E-51 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APH_1148 026e3977af52cb6fc26367144880f3a5 490 Pfam PF13180 PDZ domain 286 375 1.7E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 APH_1148 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50156 256 379 3.15E-25 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 APH_1148 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.30.42.10 280 384 4.1E-28 T 11-10-2018 APH_1148 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.40.10.120 40 278 7.5E-75 T 11-10-2018 APH_1148 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.30.42.10 401 489 6.0E-16 T 11-10-2018 APH_1148 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50494 42 281 9.9E-60 T 11-10-2018 IPR009003 Peptidase S1, PA clan APH_1148 026e3977af52cb6fc26367144880f3a5 490 Pfam PF13365 Trypsin-like peptidase domain 111 245 4.6E-35 T 11-10-2018 APH_1159 0f77eadde54f8a2ca0a8bcd61656147b 513 Gene3D G3DSA:3.30.830.10 42 261 2.2E-64 T 11-10-2018 APH_1159 0f77eadde54f8a2ca0a8bcd61656147b 513 Gene3D G3DSA:3.30.830.10 266 459 3.2E-26 T 11-10-2018 APH_1159 0f77eadde54f8a2ca0a8bcd61656147b 513 SUPERFAMILY SSF63411 43 253 1.8E-53 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_1159 0f77eadde54f8a2ca0a8bcd61656147b 513 Pfam PF05193 Peptidase M16 inactive domain 210 392 1.2E-17 T 11-10-2018 IPR007863 Peptidase M16, C-terminal APH_1159 0f77eadde54f8a2ca0a8bcd61656147b 513 SUPERFAMILY SSF63411 272 462 1.4E-20 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_1159 0f77eadde54f8a2ca0a8bcd61656147b 513 Pfam PF00675 Insulinase (Peptidase family M16) 62 198 1.1E-22 T 11-10-2018 IPR011765 Peptidase M16, N-terminal APH_0137 72659a1ba7e0217a56fa938bf7b823e5 381 SUPERFAMILY SSF47819 297 360 5.01E-7 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 APH_0137 72659a1ba7e0217a56fa938bf7b823e5 381 SMART SM00474 1 174 3.6E-31 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_0137 72659a1ba7e0217a56fa938bf7b823e5 381 SUPERFAMILY SSF53098 2 194 3.42E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_0137 72659a1ba7e0217a56fa938bf7b823e5 381 Pfam PF01612 3'-5' exonuclease 7 173 2.0E-35 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_0137 72659a1ba7e0217a56fa938bf7b823e5 381 Gene3D G3DSA:3.30.420.10 1 196 6.6E-54 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_0960 57aa41a6d598a4fd0c4d00624f43a37b 200 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 197 20.15 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APH_0960 57aa41a6d598a4fd0c4d00624f43a37b 200 SUPERFAMILY SSF51391 2 195 5.89E-64 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APH_0960 57aa41a6d598a4fd0c4d00624f43a37b 200 Gene3D G3DSA:3.20.20.70 1 198 1.6E-60 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0960 57aa41a6d598a4fd0c4d00624f43a37b 200 Pfam PF02581 Thiamine monophosphate synthase 12 179 1.3E-53 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APH_0481 c94f9223d502038bc01f6639df2dfa80 277 PIRSF PIRSF035875 1 276 7.8E-52 T 11-10-2018 IPR017039 Virulence factor BrkB APH_0481 c94f9223d502038bc01f6639df2dfa80 277 Pfam PF03631 Virulence factor BrkB 22 271 9.5E-50 T 11-10-2018 IPR017039 Virulence factor BrkB APH_0608 6f535b8ce73f754d30194e10728925de 601 SUPERFAMILY SSF109998 11 225 1.49E-17 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily APH_0608 6f535b8ce73f754d30194e10728925de 601 Pfam PF13145 PPIC-type PPIASE domain 248 339 1.8E-8 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 APH_0608 6f535b8ce73f754d30194e10728925de 601 SUPERFAMILY SSF54534 203 325 6.48E-13 T 11-10-2018 APH_0608 6f535b8ce73f754d30194e10728925de 601 Pfam PF13624 SurA N-terminal domain 5 129 1.1E-25 T 11-10-2018 APH_0608 6f535b8ce73f754d30194e10728925de 601 Gene3D G3DSA:3.10.50.40 233 352 7.6E-10 T 11-10-2018 APH_0608 6f535b8ce73f754d30194e10728925de 601 Gene3D G3DSA:1.10.4030.10 25 136 1.8E-6 T 11-10-2018 APH_1389 04ddcfa4cda7853d468fc75c520cfb53 85 Pfam PF01617 Surface antigen 9 85 5.0E-23 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1389 04ddcfa4cda7853d468fc75c520cfb53 85 SUPERFAMILY SSF56925 11 85 7.06E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1130 47d61543220ed16f4c821c76eeb0a15d 123 Pfam PF04956 TrbC/VIRB2 family 15 101 1.4E-16 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_0880 119e6ac6c6ef8d6877548afffa094356 444 Gene3D G3DSA:3.80.30.20 144 378 2.0E-83 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe APH_0880 119e6ac6c6ef8d6877548afffa094356 444 SUPERFAMILY SSF102114 134 371 4.71E-60 T 11-10-2018 APH_0880 119e6ac6c6ef8d6877548afffa094356 444 Gene3D G3DSA:3.40.50.12160 4 134 2.3E-30 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily APH_0880 119e6ac6c6ef8d6877548afffa094356 444 Pfam PF00919 Uncharacterized protein family UPF0004 6 101 4.6E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 APH_0880 119e6ac6c6ef8d6877548afffa094356 444 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 70.102 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APH_0880 119e6ac6c6ef8d6877548afffa094356 444 Pfam PF04055 Radical SAM superfamily 149 322 1.3E-33 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APH_0880 119e6ac6c6ef8d6877548afffa094356 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 APH_0880 119e6ac6c6ef8d6877548afffa094356 444 SMART SM00729 145 361 4.0E-56 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 APH_1258 b41263404a489027ca6d8f511deca296 306 SMART SM01133 46 289 5.2E-43 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 APH_1258 b41263404a489027ca6d8f511deca296 306 Gene3D G3DSA:3.20.20.70 25 306 4.5E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_1258 b41263404a489027ca6d8f511deca296 306 Pfam PF01791 DeoC/LacD family aldolase 47 289 5.9E-29 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 APH_1258 b41263404a489027ca6d8f511deca296 306 SUPERFAMILY SSF51569 40 305 3.48E-62 T 11-10-2018 APH_1258 b41263404a489027ca6d8f511deca296 306 PIRSF PIRSF038992 26 304 1.6E-57 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:3.10.20.30 49 360 2.3E-138 T 11-10-2018 IPR012675 Beta-grasp domain superfamily APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:3.40.50.300 3 278 2.3E-138 T 11-10-2018 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 40.002 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 SUPERFAMILY SSF52540 3 301 1.14E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 Gene3D G3DSA:1.10.150.300 114 198 2.3E-138 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 PIRSF PIRSF006641 1 363 5.6E-149 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 SUPERFAMILY SSF81271 279 360 6.1E-34 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 Pfam PF01926 50S ribosome-binding GTPase 5 123 8.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.9E-38 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.6E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.6E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.6E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_1285 cedde69bc95f13a78758e2724d5e91fa 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.6E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0493 87450a0a6234b82cddb4cf3f25141601 128 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 4.1E-15 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0493 87450a0a6234b82cddb4cf3f25141601 128 SUPERFAMILY SSF51344 3 85 1.12E-12 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0493 87450a0a6234b82cddb4cf3f25141601 128 Gene3D G3DSA:2.60.15.10 1 120 3.0E-14 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0895 0535866b80fdf97f9919490653b56346 141 SUPERFAMILY SSF103473 2 129 1.01E-19 T 11-10-2018 IPR036259 MFS transporter superfamily APH_0895 0535866b80fdf97f9919490653b56346 141 Pfam PF00083 Sugar (and other) transporter 7 124 9.9E-6 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APH_0895 0535866b80fdf97f9919490653b56346 141 Gene3D G3DSA:1.20.1250.20 1 135 3.5E-17 T 11-10-2018 APH_0748 baf47c2856379b6db7c4be33a295e0b6 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 13 482 82.243 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_0748 baf47c2856379b6db7c4be33a295e0b6 491 Gene3D G3DSA:3.90.1300.10 5 484 2.6E-168 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_0748 baf47c2856379b6db7c4be33a295e0b6 491 ProSitePatterns PS00571 Amidases signature. 156 187 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 APH_0748 baf47c2856379b6db7c4be33a295e0b6 491 Pfam PF01425 Amidase 26 470 4.1E-132 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_0748 baf47c2856379b6db7c4be33a295e0b6 491 SUPERFAMILY SSF75304 4 482 6.15E-141 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APH_0282 333c592d4602e2aa022ab74e490c2d86 96 SUPERFAMILY SSF54189 2 93 1.26E-20 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0282 333c592d4602e2aa022ab74e490c2d86 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 15.568 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APH_0282 333c592d4602e2aa022ab74e490c2d86 96 Pfam PF00276 Ribosomal protein L23 7 91 1.8E-18 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APH_0282 333c592d4602e2aa022ab74e490c2d86 96 Gene3D G3DSA:3.30.70.330 1 96 1.9E-18 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 PIRSF PIRSF010376 2 291 5.0E-68 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 SUPERFAMILY SSF54211 4 157 2.05E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 285 28.216 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 SUPERFAMILY SSF55060 165 280 1.63E-20 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 Gene3D G3DSA:3.30.230.10 1 158 3.5E-41 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 Pfam PF00288 GHMP kinases N terminal domain 89 140 2.5E-6 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 Pfam PF08544 GHMP kinases C terminal 207 273 3.1E-8 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain APH_0574 8426e8e46bbfbd41d8285c6e68fe3770 296 Gene3D G3DSA:3.30.70.890 164 287 7.1E-20 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 SUPERFAMILY SSF55486 1 489 4.03E-51 T 11-10-2018 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 PIRSF PIRSF006615 32 491 6.7E-68 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 148 488 5.8E-31 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 Gene3D G3DSA:1.10.1370.30 1 490 2.4E-95 T 11-10-2018 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 395 416 2.9E-12 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 326 345 2.9E-12 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 440 458 2.9E-12 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 APH_0339 b124914de59dd06e5b45b1a262e0b7b3 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 372 389 2.9E-12 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 113 3.2E-27 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 SUPERFAMILY SSF56059 117 302 5.48E-47 T 11-10-2018 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 Gene3D G3DSA:3.30.1490.20 130 193 7.5E-85 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 117 288 3.5E-55 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 SUPERFAMILY SSF52440 2 115 2.53E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 Hamap MF_00162 Glutathione synthetase [gshB]. 1 305 107.339 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 Gene3D G3DSA:3.40.50.20 12 107 7.5E-85 T 11-10-2018 APH_0193 baaa2f430dea6fb57f8fdd6fad1f42d1 305 Gene3D G3DSA:3.30.470.20 108 286 7.5E-85 T 11-10-2018 APH_0977 743a73b4d558f1d542f44fe4490b6c4e 65 PIRSF PIRSF039003 1 63 8.2E-30 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_0977 743a73b4d558f1d542f44fe4490b6c4e 65 SUPERFAMILY SSF140319 1 61 1.07E-20 T 11-10-2018 IPR036762 IscX-like superfamily APH_0977 743a73b4d558f1d542f44fe4490b6c4e 65 Pfam PF04384 Iron-sulphur cluster assembly 2 63 5.2E-25 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APH_0977 743a73b4d558f1d542f44fe4490b6c4e 65 Gene3D G3DSA:1.10.10.600 1 63 1.0E-20 T 11-10-2018 IPR036762 IscX-like superfamily APH_0167 fdc66e44c395e418f5267b771e228086 191 Pfam PF07499 RuvA, C-terminal domain 149 190 1.2E-6 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APH_0167 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF46929 149 190 7.32E-6 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily APH_0167 fdc66e44c395e418f5267b771e228086 191 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 190 21.999 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APH_0167 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:1.10.150.20 66 135 1.5E-14 T 11-10-2018 APH_0167 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF47781 66 134 1.0E-13 T 11-10-2018 IPR010994 RuvA domain 2-like APH_0167 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:2.40.50.140 1 65 8.1E-16 T 11-10-2018 APH_0167 fdc66e44c395e418f5267b771e228086 191 Pfam PF01330 RuvA N terminal domain 1 62 1.7E-15 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APH_0167 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF50249 1 63 1.41E-12 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0167 fdc66e44c395e418f5267b771e228086 191 Pfam PF14520 Helix-hairpin-helix domain 73 127 6.1E-8 T 11-10-2018 APH_0397 60691cb63e596672c8f4a3303df5d770 296 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 5 246 39.232 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0397 60691cb63e596672c8f4a3303df5d770 296 SUPERFAMILY SSF52313 9 231 2.09E-87 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily APH_0397 60691cb63e596672c8f4a3303df5d770 296 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 162 186 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 9 27 2.2E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 162 179 2.2E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 179 190 2.2E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 92 109 2.2E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 PRINTS PR00395 Ribosomal protein S2 signature 200 214 2.2E-34 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 Gene3D G3DSA:1.10.287.610 108 154 8.6E-84 T 11-10-2018 APH_0397 60691cb63e596672c8f4a3303df5d770 296 Pfam PF00318 Ribosomal protein S2 12 228 3.0E-89 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0397 60691cb63e596672c8f4a3303df5d770 296 Gene3D G3DSA:3.40.50.10490 12 222 8.6E-84 T 11-10-2018 APH_0397 60691cb63e596672c8f4a3303df5d770 296 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 9 20 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APH_0059 9ec9493df066036387449e0c14b50aae 342 SUPERFAMILY SSF55681 94 335 1.47E-73 T 11-10-2018 APH_0059 9ec9493df066036387449e0c14b50aae 342 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 89 9.6E-17 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APH_0059 9ec9493df066036387449e0c14b50aae 342 Gene3D G3DSA:3.30.930.10 9 335 5.4E-109 T 11-10-2018 APH_0059 9ec9493df066036387449e0c14b50aae 342 Pfam PF01409 tRNA synthetases class II core domain (F) 94 333 2.9E-97 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APH_0059 9ec9493df066036387449e0c14b50aae 342 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 334 42.515 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APH_0059 9ec9493df066036387449e0c14b50aae 342 SUPERFAMILY SSF46589 15 101 1.57E-15 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 APH_1114 715e573c4c165a76c6fc31fa4e13f575 355 Pfam PF01617 Surface antigen 27 338 5.2E-51 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1114 715e573c4c165a76c6fc31fa4e13f575 355 SUPERFAMILY SSF56925 27 336 3.45E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 Pfam PF02911 Formyl transferase, C-terminal domain 204 292 2.7E-16 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 Pfam PF00551 Formyl transferase 1 181 9.0E-39 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 Gene3D G3DSA:3.10.25.10 204 297 1.3E-10 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 SUPERFAMILY SSF53328 1 204 2.88E-57 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 SUPERFAMILY SSF50486 204 293 3.53E-14 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 Gene3D G3DSA:3.40.50.170 1 203 9.4E-68 T 11-10-2018 APH_0965 e1f29c0d74cd6b8d28d58350a46695a9 301 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 295 29.205 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 Gene3D G3DSA:2.10.109.10 27 222 2.2E-54 T 11-10-2018 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 Gene3D G3DSA:2.170.230.10 117 178 2.2E-54 T 11-10-2018 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 ProSitePatterns PS00761 Signal peptidases I signature 3. 184 197 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 ProSitePatterns PS00760 Signal peptidases I lysine active site. 108 120 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 4.8E-23 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 106 118 4.8E-23 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 179 198 4.8E-23 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 SUPERFAMILY SSF51306 27 240 4.39E-58 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily APH_0802 ab3b2695e74a39e4c3a83cc5999cc5f8 243 Pfam PF00717 Peptidase S24-like 35 130 1.2E-19 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C APH_0581 00e2f52e7e6e1dae9e9e37afbd50dfbc 111 SUPERFAMILY SSF54913 2 105 1.74E-34 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta APH_0581 00e2f52e7e6e1dae9e9e37afbd50dfbc 111 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 2.6E-32 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APH_0581 00e2f52e7e6e1dae9e9e37afbd50dfbc 111 Gene3D G3DSA:3.30.70.120 1 106 1.1E-34 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APH_0142 ea8168f43d15b6ec312ce3c5a9543070 261 Pfam PF01617 Surface antigen 113 261 6.4E-39 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0142 ea8168f43d15b6ec312ce3c5a9543070 261 Gene3D G3DSA:2.40.160.20 32 222 1.3E-9 T 11-10-2018 APH_0142 ea8168f43d15b6ec312ce3c5a9543070 261 SUPERFAMILY SSF56925 140 222 7.85E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 Gene3D G3DSA:3.40.50.1440 7 223 2.0E-78 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 SUPERFAMILY SSF52490 15 211 3.14E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 SMART SM00864 16 208 2.0E-107 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 Pfam PF12327 FtsZ family, C-terminal domain 225 320 6.7E-39 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 SMART SM00865 210 328 1.5E-57 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 Gene3D G3DSA:3.30.1330.20 224 333 4.1E-38 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 SUPERFAMILY SSF55307 207 322 1.26E-42 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 129 150 9.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 101 121 9.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 215 236 9.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 192 214 9.3E-51 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 5.1E-42 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APH_1292 b588c1902af56d5e4b5a6df3e392459a 400 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 345 36.525 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 APH_0016 a690886a4f25a98f718135766ee93e41 275 Gene3D G3DSA:3.20.20.70 109 261 5.3E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0016 a690886a4f25a98f718135766ee93e41 275 SUPERFAMILY SSF51690 106 270 2.75E-52 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 APH_0016 a690886a4f25a98f718135766ee93e41 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 104 3.6E-21 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 APH_0016 a690886a4f25a98f718135766ee93e41 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 270 7.4E-50 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 APH_0016 a690886a4f25a98f718135766ee93e41 275 SUPERFAMILY SSF54675 3 105 1.12E-21 T 11-10-2018 APH_0016 a690886a4f25a98f718135766ee93e41 275 Gene3D G3DSA:3.90.1170.20 8 270 5.3E-90 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 APH_0016 a690886a4f25a98f718135766ee93e41 275 PIRSF PIRSF006250 1 274 2.2E-74 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 APH_1274 5e90bb1ace06028eb1b469e6a6d12f88 305 Gene3D G3DSA:2.40.160.20 131 267 1.6E-9 T 11-10-2018 APH_1274 5e90bb1ace06028eb1b469e6a6d12f88 305 SUPERFAMILY SSF56925 183 305 1.1E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1274 5e90bb1ace06028eb1b469e6a6d12f88 305 Pfam PF01617 Surface antigen 146 305 4.8E-51 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0999 2cf98a275f6af230f53d9a9969f46674 127 PIRSF PIRSF000178 1 125 1.5E-37 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0999 2cf98a275f6af230f53d9a9969f46674 127 Gene3D G3DSA:1.20.1300.10 1 123 4.1E-31 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0999 2cf98a275f6af230f53d9a9969f46674 127 SUPERFAMILY SSF81343 2 122 8.07E-29 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0999 2cf98a275f6af230f53d9a9969f46674 127 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 81 94 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0999 2cf98a275f6af230f53d9a9969f46674 127 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 5.1E-28 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0999 2cf98a275f6af230f53d9a9969f46674 127 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 5 29 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 APH_0646 44a0b384ef19cf021c2ba0518655cd7c 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 22.314 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 APH_0646 44a0b384ef19cf021c2ba0518655cd7c 122 Gene3D G3DSA:3.90.470.20 1 122 3.5E-35 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 APH_0646 44a0b384ef19cf021c2ba0518655cd7c 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 120 4.0E-25 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 APH_0646 44a0b384ef19cf021c2ba0518655cd7c 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 118 6.9E-22 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 APH_0646 44a0b384ef19cf021c2ba0518655cd7c 122 SUPERFAMILY SSF56214 1 120 1.83E-30 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 APH_1360 21e3ac3278a715e864bd56b1ba9ac857 497 SUPERFAMILY SSF50475 3 327 7.06E-112 T 11-10-2018 APH_1360 21e3ac3278a715e864bd56b1ba9ac857 497 Gene3D G3DSA:3.40.1670.10 342 459 1.6E-45 T 11-10-2018 APH_1360 21e3ac3278a715e864bd56b1ba9ac857 497 SUPERFAMILY SSF143968 328 492 3.66E-63 T 11-10-2018 APH_1360 21e3ac3278a715e864bd56b1ba9ac857 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 435 1.8E-157 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:2.40.50.140 630 701 1.1E-23 T 11-10-2018 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:3.30.1370.10 558 629 2.3E-18 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 247 327 3.9E-10 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF01138 3' exoribonuclease family, domain 1 331 464 4.4E-22 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 1.7E-19 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF50249 628 703 5.89E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF00013 KH domain 564 621 6.7E-11 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF54791 563 647 2.57E-20 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SMART SM00316 628 697 4.8E-17 T 11-10-2018 IPR022967 RNA-binding domain, S1 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF46915 242 334 3.4E-11 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:3.30.230.70 1 230 5.6E-74 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 2.5E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Gene3D G3DSA:3.30.230.70 235 557 1.1E-108 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF55666 458 553 5.37E-25 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF54211 2 143 7.59E-45 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SMART SM00322 560 625 1.3E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Pfam PF00575 S1 RNA binding domain 626 697 7.8E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF54211 305 495 1.27E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_0767 35deb6fd3746ceb0a01d77768797c236 838 SUPERFAMILY SSF55666 137 229 4.45E-23 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 APH_0767 35deb6fd3746ceb0a01d77768797c236 838 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 700 28.615 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APH_0047 9be9c61cae4efa9a1839bc5fc76e23b0 153 Pfam PF03477 ATP cone domain 49 136 7.1E-14 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 APH_0047 9be9c61cae4efa9a1839bc5fc76e23b0 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 66.538 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APH_1264 806529fadff23937ec5880024fe1920d 615 SUPERFAMILY SSF55681 219 503 2.3E-97 T 11-10-2018 APH_1264 806529fadff23937ec5880024fe1920d 615 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 294 506 2.9E-46 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_1264 806529fadff23937ec5880024fe1920d 615 Gene3D G3DSA:3.30.980.10 47 197 5.4E-42 T 11-10-2018 APH_1264 806529fadff23937ec5880024fe1920d 615 SUPERFAMILY SSF55186 43 217 1.14E-43 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 APH_1264 806529fadff23937ec5880024fe1920d 615 SMART SM00863 146 195 1.3E-10 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 APH_1264 806529fadff23937ec5880024fe1920d 615 Gene3D G3DSA:3.40.50.800 509 614 1.1E-21 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily APH_1264 806529fadff23937ec5880024fe1920d 615 Pfam PF03129 Anticodon binding domain 521 605 2.1E-11 T 11-10-2018 IPR004154 Anticodon-binding APH_1264 806529fadff23937ec5880024fe1920d 615 Gene3D G3DSA:3.30.54.20 108 163 5.4E-42 T 11-10-2018 APH_1264 806529fadff23937ec5880024fe1920d 615 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 44 611 30.919 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_1264 806529fadff23937ec5880024fe1920d 615 Gene3D G3DSA:3.30.930.10 198 508 6.4E-125 T 11-10-2018 APH_1264 806529fadff23937ec5880024fe1920d 615 PRINTS PR01047 Threonyl-tRNA synthetase signature 306 334 4.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_1264 806529fadff23937ec5880024fe1920d 615 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 523 4.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_1264 806529fadff23937ec5880024fe1920d 615 PRINTS PR01047 Threonyl-tRNA synthetase signature 441 469 4.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_1264 806529fadff23937ec5880024fe1920d 615 PRINTS PR01047 Threonyl-tRNA synthetase signature 484 497 4.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_1264 806529fadff23937ec5880024fe1920d 615 PRINTS PR01047 Threonyl-tRNA synthetase signature 339 362 4.0E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APH_1264 806529fadff23937ec5880024fe1920d 615 SUPERFAMILY SSF52954 506 609 1.96E-21 T 11-10-2018 APH_1264 806529fadff23937ec5880024fe1920d 615 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 161 194 5.5E-5 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 APH_0355 423351b64e4c4b8ff3de3ed9956c99d2 327 Pfam PF07722 Peptidase C26 145 294 1.9E-7 T 11-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 APH_0355 423351b64e4c4b8ff3de3ed9956c99d2 327 SUPERFAMILY SSF52317 98 296 4.58E-12 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0355 423351b64e4c4b8ff3de3ed9956c99d2 327 Gene3D G3DSA:3.40.50.880 88 306 1.3E-14 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_1030 c3d577dabd58f63a220379e950764637 66 Gene3D G3DSA:1.20.5.1030 1 59 5.2E-11 T 11-10-2018 IPR038379 SecE superfamily APH_1030 c3d577dabd58f63a220379e950764637 66 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 57 3.1E-11 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_1030 c3d577dabd58f63a220379e950764637 66 Hamap MF_00422 Protein translocase subunit SecE [secE]. 3 58 10.89 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_0221 a87a3da13b77b74e2eda87f55f61e74c 222 Pfam PF01551 Peptidase family M23 110 209 2.5E-16 T 11-10-2018 IPR016047 Peptidase M23 APH_0221 a87a3da13b77b74e2eda87f55f61e74c 222 SUPERFAMILY SSF51261 50 211 5.75E-22 T 11-10-2018 IPR011055 Duplicated hybrid motif APH_0221 a87a3da13b77b74e2eda87f55f61e74c 222 Gene3D G3DSA:2.70.70.10 71 215 2.9E-19 T 11-10-2018 IPR011055 Duplicated hybrid motif APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 Pfam PF07724 AAA domain (Cdc48 subfamily) 206 323 1.4E-34 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 SMART SM00382 49 326 1.8E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 329 399 4.2E-6 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 121 1.5E-5 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 SMART SM01086 329 423 5.0E-23 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 SUPERFAMILY SSF52540 6 434 1.14E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1074 b777ef523a4b2eb9d9e61c1df39d140e 437 Gene3D G3DSA:1.10.8.60 329 434 1.3E-39 T 11-10-2018 APH_0504 6892d509160a0cc785fdc845b5bee898 247 SUPERFAMILY SSF53335 66 247 6.06E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0504 6892d509160a0cc785fdc845b5bee898 247 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 51 246 29.346 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 APH_0504 6892d509160a0cc785fdc845b5bee898 247 Gene3D G3DSA:3.40.50.150 63 247 1.9E-56 T 11-10-2018 APH_0504 6892d509160a0cc785fdc845b5bee898 247 PIRSF PIRSF005461 33 247 3.4E-69 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 APH_0504 6892d509160a0cc785fdc845b5bee898 247 Pfam PF01728 FtsJ-like methyltransferase 67 245 3.3E-54 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF52540 570 798 1.33E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:3.40.1170.10 1 122 5.0E-45 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF53150 115 270 3.4E-37 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF48334 271 569 1.15E-76 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily APH_0857 20b6a806b60e27083e6e12b861ec776b 820 SMART SM00534 608 795 3.0E-102 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:3.30.420.110 128 264 2.0E-28 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 SUPERFAMILY SSF55271 3 116 4.71E-39 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF00488 MutS domain V 612 796 2.4E-76 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 820 21.801 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:1.10.1420.10 270 562 1.7E-78 T 11-10-2018 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF05190 MutS family domain IV 432 522 6.1E-19 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF01624 MutS domain I 8 120 5.9E-39 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 SMART SM00533 287 594 4.6E-83 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF05192 MutS domain III 274 562 3.4E-36 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Pfam PF05188 MutS domain II 129 256 5.1E-22 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 PIRSF PIRSF037677 2 816 4.7E-168 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:1.10.1420.10 391 506 1.7E-78 T 11-10-2018 APH_0857 20b6a806b60e27083e6e12b861ec776b 820 Gene3D G3DSA:3.40.50.300 571 817 6.5E-90 T 11-10-2018 APH_1194 a1e8c9e11177d7fbea1116f7098fff84 252 Pfam PF01617 Surface antigen 168 237 1.5E-18 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0671 1f3325e80d221bb164c0d3ecab8400d9 236 Gene3D G3DSA:3.40.50.1820 4 229 1.9E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0671 1f3325e80d221bb164c0d3ecab8400d9 236 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 52 202 3.0E-10 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 APH_0671 1f3325e80d221bb164c0d3ecab8400d9 236 SUPERFAMILY SSF53474 5 218 9.04E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 120 138 1.2E-33 T 11-10-2018 IPR023635 Peptide deformylase APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 108 119 1.2E-33 T 11-10-2018 IPR023635 Peptide deformylase APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 139 168 1.2E-33 T 11-10-2018 IPR023635 Peptide deformylase APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 PRINTS PR01576 Peptide deformylase signature 35 64 1.2E-33 T 11-10-2018 IPR023635 Peptide deformylase APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 Gene3D G3DSA:3.90.45.10 1 185 7.2E-59 T 11-10-2018 IPR036821 Peptide deformylase superfamily APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 SUPERFAMILY SSF56420 3 183 1.96E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 Pfam PF01327 Polypeptide deformylase 4 171 2.4E-51 T 11-10-2018 IPR023635 Peptide deformylase APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 Hamap MF_00163 Peptide deformylase [def]. 2 181 29.359 T 11-10-2018 IPR023635 Peptide deformylase APH_1372 cf8ed4ec1ed99bf5926521f989fafd44 187 PIRSF PIRSF004749 1 187 6.1E-51 T 11-10-2018 IPR023635 Peptide deformylase APH_0083 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.2E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0083 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.2E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0083 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 230 244 1.2E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0083 6da37ee417fa181292482f435ad81069 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.2E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0083 6da37ee417fa181292482f435ad81069 292 Gene3D G3DSA:3.40.50.1820 2 287 3.6E-56 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0083 6da37ee417fa181292482f435ad81069 292 Pfam PF00561 alpha/beta hydrolase fold 34 132 1.1E-11 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 APH_0083 6da37ee417fa181292482f435ad81069 292 SUPERFAMILY SSF53474 15 278 6.34E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0438 3822104288eff1ab97d00532d51afed5 491 Pfam PF00361 Proton-conducting membrane transporter 128 415 3.0E-61 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0438 3822104288eff1ab97d00532d51afed5 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 130 149 5.2E-42 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0438 3822104288eff1ab97d00532d51afed5 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 160 184 5.2E-42 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0438 3822104288eff1ab97d00532d51afed5 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.2E-42 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0438 3822104288eff1ab97d00532d51afed5 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.2E-42 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0438 3822104288eff1ab97d00532d51afed5 491 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.2E-42 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0299 6fade2e9f109978f316e838f442f61c7 434 Pfam PF00344 SecY translocase 69 407 2.9E-100 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_0299 6fade2e9f109978f316e838f442f61c7 434 ProSitePatterns PS00756 Protein secY signature 2. 167 184 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_0299 6fade2e9f109978f316e838f442f61c7 434 SUPERFAMILY SSF103491 9 415 1.57E-111 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 306 328 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 16 34 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 393 411 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 361 379 9.7E-85 T 11-10-2018 APH_0299 6fade2e9f109978f316e838f442f61c7 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 3 424 26.651 T 11-10-2018 IPR026593 Protein translocase subunit SecY APH_0299 6fade2e9f109978f316e838f442f61c7 434 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_0299 6fade2e9f109978f316e838f442f61c7 434 PIRSF PIRSF004557 4 431 2.4E-114 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_0299 6fade2e9f109978f316e838f442f61c7 434 Gene3D G3DSA:1.10.3370.10 7 420 2.3E-137 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 APH_1110 93dd01063a0a550dec3f4ff7ec9b1eb4 424 Gene3D G3DSA:1.20.1600.10 40 424 2.0E-63 T 11-10-2018 APH_1110 93dd01063a0a550dec3f4ff7ec9b1eb4 424 Pfam PF02321 Outer membrane efflux protein 238 419 2.6E-17 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 APH_1110 93dd01063a0a550dec3f4ff7ec9b1eb4 424 Pfam PF02321 Outer membrane efflux protein 42 212 1.7E-18 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 APH_1110 93dd01063a0a550dec3f4ff7ec9b1eb4 424 SUPERFAMILY SSF56954 13 421 4.45E-60 T 11-10-2018 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 SUPERFAMILY SSF50129 1 92 7.77E-26 T 11-10-2018 IPR011032 GroES-like superfamily APH_0241 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 24 45 1.5E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.5E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.5E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 3 18 1.5E-22 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 SMART SM00883 2 93 2.3E-37 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 Gene3D G3DSA:2.30.33.40 1 94 3.1E-28 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 Pfam PF00166 Chaperonin 10 Kd subunit 3 92 4.6E-28 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_0241 ea7c669fb157884745d4d66b209cae3a 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 19.862 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APH_1403 e6100ad35c0b59bb3690ae72d9c68b90 332 SUPERFAMILY SSF52540 11 311 4.15E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1403 e6100ad35c0b59bb3690ae72d9c68b90 332 Gene3D G3DSA:3.30.450.90 7 113 1.8E-31 T 11-10-2018 APH_1403 e6100ad35c0b59bb3690ae72d9c68b90 332 Pfam PF00437 Type II/IV secretion system protein 13 312 1.8E-84 T 11-10-2018 IPR001482 Type II/IV secretion system protein APH_1403 e6100ad35c0b59bb3690ae72d9c68b90 332 Gene3D G3DSA:3.40.50.300 115 330 7.9E-68 T 11-10-2018 APH_0614 6ad4d1b5f0089c29d1b7b594f3159a52 249 Pfam PF04085 rod shape-determining protein MreC 110 242 6.4E-21 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 APH_0614 6ad4d1b5f0089c29d1b7b594f3159a52 249 Gene3D G3DSA:2.40.10.340 99 177 1.2E-12 T 11-10-2018 APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 Pfam PF00270 DEAD/DEAH box helicase 134 299 2.2E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 SMART SM00490 428 523 4.7E-9 T 11-10-2018 IPR001650 Helicase, C-terminal APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 657 21.856 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 SMART SM00487 126 326 5.5E-23 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 Pfam PF00271 Helicase conserved C-terminal domain 440 522 1.1E-8 T 11-10-2018 IPR001650 Helicase, C-terminal APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 Gene3D G3DSA:3.40.50.300 117 313 1.6E-58 T 11-10-2018 APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 Gene3D G3DSA:1.10.8.630 1 104 1.1E-21 T 11-10-2018 APH_0356 0b3c8bcf2bfabe9bd93b285cc994e908 658 SUPERFAMILY SSF52540 147 533 2.35E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1037 076806918f7e133fc18906d247410efb 435 Pfam PF04052 TolB amino-terminal domain 25 129 2.7E-18 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APH_1037 076806918f7e133fc18906d247410efb 435 SUPERFAMILY SSF82171 101 429 2.51E-41 T 11-10-2018 APH_1037 076806918f7e133fc18906d247410efb 435 Gene3D G3DSA:2.120.10.30 165 433 9.3E-54 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like APH_1037 076806918f7e133fc18906d247410efb 435 Gene3D G3DSA:3.40.50.10070 21 164 3.7E-24 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 APH_1037 076806918f7e133fc18906d247410efb 435 Pfam PF07676 WD40-like Beta Propeller Repeat 197 219 0.022 T 11-10-2018 IPR011659 WD40-like Beta Propeller APH_1037 076806918f7e133fc18906d247410efb 435 Pfam PF07676 WD40-like Beta Propeller Repeat 280 316 2.3E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller APH_1037 076806918f7e133fc18906d247410efb 435 Pfam PF07676 WD40-like Beta Propeller Repeat 325 350 1.9E-6 T 11-10-2018 IPR011659 WD40-like Beta Propeller APH_1310 6ac2dcf751b3c86dbf13e60dd964c19a 473 Pfam PF01523 Putative modulator of DNA gyrase 34 323 7.6E-52 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 APH_1310 6ac2dcf751b3c86dbf13e60dd964c19a 473 SUPERFAMILY SSF111283 30 471 2.22E-111 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 APH_1310 6ac2dcf751b3c86dbf13e60dd964c19a 473 PIRSF PIRSF004919 13 472 2.7E-124 T 11-10-2018 IPR025502 TldD APH_1229 5aed72840da6e6dfbc1113816fb6136a 425 Pfam PF01617 Surface antigen 27 425 1.3E-80 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1229 5aed72840da6e6dfbc1113816fb6136a 425 SUPERFAMILY SSF56925 27 425 4.19E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1229 5aed72840da6e6dfbc1113816fb6136a 425 Gene3D G3DSA:2.40.160.20 245 387 1.1E-8 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 143 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 90 102 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 102 122 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 3.7E-46 T 11-10-2018 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 129 246 8.7E-53 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 SUPERFAMILY SSF49503 124 259 4.65E-56 T 11-10-2018 IPR008972 Cupredoxin APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 Gene3D G3DSA:1.10.287.90 26 124 1.5E-28 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 SUPERFAMILY SSF81464 23 117 4.74E-25 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 Gene3D G3DSA:2.60.40.420 125 259 4.9E-57 T 11-10-2018 IPR008972 Cupredoxin APH_1084 c5db7234c2c2599d319eee9b53d87bc9 262 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 27 113 2.8E-17 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0925 efc0f5d37a3545ce806c3377201678b8 56 Pfam PF00471 Ribosomal protein L33 10 54 4.0E-12 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0925 efc0f5d37a3545ce806c3377201678b8 56 Gene3D G3DSA:2.20.28.120 1 56 1.3E-23 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0925 efc0f5d37a3545ce806c3377201678b8 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 12.35 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0925 efc0f5d37a3545ce806c3377201678b8 56 SUPERFAMILY SSF57829 3 54 2.2E-15 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 Gene3D G3DSA:3.50.50.60 296 460 4.8E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 Gene3D G3DSA:3.50.50.60 1 221 4.4E-86 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 SMART SM01228 544 615 1.3E-34 T 11-10-2018 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 SUPERFAMILY SSF51905 2 260 5.46E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 Gene3D G3DSA:1.10.150.570 567 619 3.2E-20 T 11-10-2018 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 Pfam PF01134 Glucose inhibited division protein A 5 396 7.3E-157 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 Pfam PF13932 GidA associated domain 403 613 1.0E-70 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 622 39.046 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 APH_0224 e079d53344d46cddc9cb96cea7508bf3 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Pfam PF01541 GIY-YIG catalytic domain 28 102 3.8E-10 T 11-10-2018 IPR000305 GIY-YIG endonuclease APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 SMART SM00465 26 107 8.4E-18 T 11-10-2018 IPR000305 GIY-YIG endonuclease APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 392 538 5.7E-41 T 11-10-2018 IPR001162 UvrC family homology region APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Gene3D G3DSA:3.40.1440.10 14 111 2.6E-26 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 SUPERFAMILY SSF82771 26 109 1.83E-20 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Gene3D G3DSA:3.30.420.340 383 547 8.5E-45 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Hamap MF_00203 UvrABC system protein C [uvrC]. 13 604 23.718 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 SUPERFAMILY SSF47781 517 608 2.45E-17 T 11-10-2018 IPR010994 RuvA domain 2-like APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Gene3D G3DSA:1.10.150.20 552 607 2.6E-18 T 11-10-2018 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 Pfam PF14520 Helix-hairpin-helix domain 554 606 6.1E-9 T 11-10-2018 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 SMART SM00278 553 572 75.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 SMART SM00278 585 604 5.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APH_0884 2ef2b99ecb88e99897472a94b39a0688 614 SUPERFAMILY SSF46600 202 250 3.92E-6 T 11-10-2018 IPR036876 UVR domain superfamily APH_0851 3ad58217a36f8e66476a758bc907177e 330 SMART SM01004 3 324 3.7E-190 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 3.2E-45 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 3.2E-45 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 298 317 3.2E-45 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 243 259 3.2E-45 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 3.2E-45 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 283 3.2E-45 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 243 255 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 SUPERFAMILY SSF51569 2 325 2.2E-121 T 11-10-2018 APH_0851 3ad58217a36f8e66476a758bc907177e 330 PIRSF PIRSF001415 1 327 1.2E-126 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_0851 3ad58217a36f8e66476a758bc907177e 330 Gene3D G3DSA:3.20.20.70 2 328 1.5E-124 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0851 3ad58217a36f8e66476a758bc907177e 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 322 6.7E-123 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 APH_1050 edd3a4b4cc65564417a2a762fcbbf3f3 339 SUPERFAMILY SSF53850 19 336 4.52E-58 T 11-10-2018 APH_1050 edd3a4b4cc65564417a2a762fcbbf3f3 339 Gene3D G3DSA:3.40.190.10 108 278 1.0E-46 T 11-10-2018 APH_1050 edd3a4b4cc65564417a2a762fcbbf3f3 339 Gene3D G3DSA:3.40.190.10 24 305 1.0E-46 T 11-10-2018 APH_1050 edd3a4b4cc65564417a2a762fcbbf3f3 339 Pfam PF12849 PBP superfamily domain 22 303 1.3E-32 T 11-10-2018 IPR024370 PBP domain APH_0030 d70b1522fdee83d77b9f6cc77b9e7299 209 Pfam PF01617 Surface antigen 132 206 2.6E-18 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0436 e83fde6a6e3a490a3f59fd97ac9f1305 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 14 100 2.3E-21 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like APH_0436 e83fde6a6e3a490a3f59fd97ac9f1305 108 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 9 108 17.954 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 111 121 1.1E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 144 154 1.1E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 82 89 1.1E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 160 168 1.1E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 95 110 1.1E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 PRINTS PR00604 Class IA and IB cytochrome C signature 125 141 1.1E-17 T 11-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 Gene3D G3DSA:1.10.760.10 38 168 4.8E-37 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 Pfam PF00034 Cytochrome c 73 169 3.3E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0180 09b701f3184545b6b2bd1fff4eb9c14e 174 SUPERFAMILY SSF46626 70 170 3.11E-31 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 APH_0051 4dafadf3cdac8c66ce36d87499a41955 336 Gene3D G3DSA:3.40.190.10 24 299 1.8E-118 T 11-10-2018 APH_0051 4dafadf3cdac8c66ce36d87499a41955 336 Pfam PF13343 Bacterial extracellular solute-binding protein 72 298 4.0E-22 T 11-10-2018 APH_0051 4dafadf3cdac8c66ce36d87499a41955 336 SUPERFAMILY SSF53850 19 323 5.65E-74 T 11-10-2018 APH_0051 4dafadf3cdac8c66ce36d87499a41955 336 Gene3D G3DSA:3.40.190.10 122 334 1.8E-118 T 11-10-2018 APH_0051 4dafadf3cdac8c66ce36d87499a41955 336 PIRSF PIRSF002825 3 336 4.8E-83 T 11-10-2018 IPR026045 Ferric binding protein APH_0700 9219e1385ab37639e29c669ea1be662f 580 SUPERFAMILY SSF55190 8 120 2.22E-15 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 17 99 2.6E-15 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APH_0700 9219e1385ab37639e29c669ea1be662f 580 SMART SM00836 456 579 1.4E-47 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APH_0700 9219e1385ab37639e29c669ea1be662f 580 Gene3D G3DSA:3.30.1360.70 12 125 6.3E-16 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 SMART SM01016 12 100 7.2E-23 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APH_0700 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 160 3.4E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 325 346 3.4E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 168 181 3.4E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 144 3.4E-23 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 Hamap MF_00123 Arginine--tRNA ligase [argS]. 12 579 22.631 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 139 148 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0700 9219e1385ab37639e29c669ea1be662f 580 SUPERFAMILY SSF52374 124 466 7.24E-79 T 11-10-2018 APH_0700 9219e1385ab37639e29c669ea1be662f 580 Gene3D G3DSA:1.10.730.10 451 579 1.1E-132 T 11-10-2018 APH_0700 9219e1385ab37639e29c669ea1be662f 580 Pfam PF00750 tRNA synthetases class I (R) 119 441 1.4E-19 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 APH_0700 9219e1385ab37639e29c669ea1be662f 580 SUPERFAMILY SSF47323 451 579 3.99E-30 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0700 9219e1385ab37639e29c669ea1be662f 580 Gene3D G3DSA:3.40.50.620 129 450 1.1E-132 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0700 9219e1385ab37639e29c669ea1be662f 580 Pfam PF05746 DALR anticodon binding domain 456 579 1.4E-23 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APH_0037 5584f19d86c8fa5b11895048ef158504 364 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 1.7E-18 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain APH_0037 5584f19d86c8fa5b11895048ef158504 364 Gene3D G3DSA:3.40.430.10 141 363 6.4E-52 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 APH_0037 5584f19d86c8fa5b11895048ef158504 364 PIRSF PIRSF006769 1 357 2.7E-116 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 APH_0037 5584f19d86c8fa5b11895048ef158504 364 SUPERFAMILY SSF53597 148 350 1.07E-46 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 APH_0037 5584f19d86c8fa5b11895048ef158504 364 SUPERFAMILY SSF53927 4 141 6.55E-44 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 APH_0037 5584f19d86c8fa5b11895048ef158504 364 Gene3D G3DSA:3.40.140.10 2 140 3.2E-43 T 11-10-2018 APH_0037 5584f19d86c8fa5b11895048ef158504 364 Pfam PF01872 RibD C-terminal domain 148 322 1.7E-33 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APH_0037 5584f19d86c8fa5b11895048ef158504 364 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APH_0412 22442e9118da219e5541d332c312397b 249 SUPERFAMILY SSF51905 124 198 1.24E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0412 22442e9118da219e5541d332c312397b 249 Gene3D G3DSA:3.50.50.60 74 238 2.0E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0412 22442e9118da219e5541d332c312397b 249 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 52 66 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 APH_0412 22442e9118da219e5541d332c312397b 249 Pfam PF13932 GidA associated domain 181 243 2.6E-31 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 APH_0412 22442e9118da219e5541d332c312397b 249 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 147 170 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 APH_0412 22442e9118da219e5541d332c312397b 249 Pfam PF01134 Glucose inhibited division protein A 47 174 1.4E-57 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 APH_0677 08a2b49953dbc0fdbbb5264c10c6e918 146 Gene3D G3DSA:1.10.287.110 4 80 4.5E-16 T 11-10-2018 IPR036869 Chaperone J-domain superfamily APH_0677 08a2b49953dbc0fdbbb5264c10c6e918 146 SUPERFAMILY SSF46565 4 73 4.19E-11 T 11-10-2018 IPR036869 Chaperone J-domain superfamily APH_0852 3627e850a1dbfe1bb6865d60c1bbd39c 600 Gene3D G3DSA:3.60.110.10 2 243 7.3E-12 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily APH_0852 3627e850a1dbfe1bb6865d60c1bbd39c 600 Pfam PF02540 NAD synthase 333 589 2.2E-66 T 11-10-2018 IPR022310 NAD/GMP synthase APH_0852 3627e850a1dbfe1bb6865d60c1bbd39c 600 SUPERFAMILY SSF52402 332 597 2.79E-69 T 11-10-2018 APH_0852 3627e850a1dbfe1bb6865d60c1bbd39c 600 SUPERFAMILY SSF56317 3 217 4.53E-7 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily APH_0852 3627e850a1dbfe1bb6865d60c1bbd39c 600 Gene3D G3DSA:3.40.50.620 331 600 5.4E-92 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0852 3627e850a1dbfe1bb6865d60c1bbd39c 600 PIRSF PIRSF006630 1 600 1.5E-103 T 11-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 APH_0376 439d1d60e82fd8717aa8f3acbb5489a8 1477 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 827 1022 1.5E-18 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_0628 f87e32e45d75bb81bbb6640a589564c2 116 Gene3D G3DSA:3.30.1130.10 2 111 1.1E-16 T 11-10-2018 APH_0628 f87e32e45d75bb81bbb6640a589564c2 116 SUPERFAMILY SSF55620 5 113 1.61E-19 T 11-10-2018 APH_0628 f87e32e45d75bb81bbb6640a589564c2 116 Pfam PF02152 Dihydroneopterin aldolase 6 108 1.1E-16 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 APH_0628 f87e32e45d75bb81bbb6640a589564c2 116 SMART SM00905 5 110 5.1E-19 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 APH_0431 9016309d71d04f461e3d34a08b0ab425 312 SUPERFAMILY SSF52540 5 148 1.29E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0431 9016309d71d04f461e3d34a08b0ab425 312 Pfam PF01715 IPP transferase 38 277 2.5E-53 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 APH_0431 9016309d71d04f461e3d34a08b0ab425 312 Gene3D G3DSA:3.40.50.300 9 277 3.1E-68 T 11-10-2018 APH_0431 9016309d71d04f461e3d34a08b0ab425 312 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 293 22.272 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 APH_0431 9016309d71d04f461e3d34a08b0ab425 312 Gene3D G3DSA:1.10.20.140 109 179 3.1E-68 T 11-10-2018 APH_0066 51b4221629af22e985fb3205c78f2d9c 118 Gene3D G3DSA:1.10.287.110 53 117 1.7E-20 T 11-10-2018 IPR036869 Chaperone J-domain superfamily APH_0066 51b4221629af22e985fb3205c78f2d9c 118 SMART SM00271 65 118 7.9E-6 T 11-10-2018 IPR001623 DnaJ domain APH_0066 51b4221629af22e985fb3205c78f2d9c 118 SUPERFAMILY SSF46565 62 116 1.31E-14 T 11-10-2018 IPR036869 Chaperone J-domain superfamily APH_0066 51b4221629af22e985fb3205c78f2d9c 118 Pfam PF00226 DnaJ domain 69 98 3.3E-7 T 11-10-2018 IPR001623 DnaJ domain APH_0112 ff2e47c0c0f50e9160c1a3f333880277 184 Gene3D G3DSA:1.10.132.20 13 182 6.7E-55 T 11-10-2018 APH_0112 ff2e47c0c0f50e9160c1a3f333880277 184 Pfam PF01765 Ribosome recycling factor 23 183 3.7E-49 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 APH_0112 ff2e47c0c0f50e9160c1a3f333880277 184 Gene3D G3DSA:3.30.1360.40 32 105 6.7E-55 T 11-10-2018 APH_0112 ff2e47c0c0f50e9160c1a3f333880277 184 SUPERFAMILY SSF55194 6 183 4.06E-56 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 APH_0350 fa037c36a365f1e545213059be33ad8e 305 SUPERFAMILY SSF54814 192 297 3.73E-31 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 APH_0350 fa037c36a365f1e545213059be33ad8e 305 Hamap MF_00367 GTPase Era [era]. 17 304 28.227 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0350 fa037c36a365f1e545213059be33ad8e 305 Pfam PF07650 KH domain 219 295 9.5E-15 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0350 fa037c36a365f1e545213059be33ad8e 305 SUPERFAMILY SSF52540 21 225 8.82E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0350 fa037c36a365f1e545213059be33ad8e 305 Gene3D G3DSA:3.40.50.300 17 196 4.4E-42 T 11-10-2018 APH_0350 fa037c36a365f1e545213059be33ad8e 305 Pfam PF01926 50S ribosome-binding GTPase 22 136 3.7E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 APH_0350 fa037c36a365f1e545213059be33ad8e 305 Gene3D G3DSA:3.30.300.20 197 305 3.4E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 Gene3D G3DSA:3.90.230.10 3 263 5.5E-106 T 11-10-2018 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 39.119 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 7.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 7.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 7.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 7.3E-21 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 Pfam PF00557 Metallopeptidase family M24 15 245 1.9E-49 T 11-10-2018 IPR000994 Peptidase M24 APH_1199 6ab87bdea01a6f1cf5e24fb0e367f002 264 SUPERFAMILY SSF55920 6 259 3.4E-82 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like APH_1252 b62a252d9cc5b7d5c51bfc965926f3f6 338 Pfam PF06144 DNA polymerase III, delta subunit 22 184 8.4E-10 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APH_1252 b62a252d9cc5b7d5c51bfc965926f3f6 338 Gene3D G3DSA:1.20.272.10 212 335 1.1E-5 T 11-10-2018 APH_1252 b62a252d9cc5b7d5c51bfc965926f3f6 338 SUPERFAMILY SSF52540 18 202 1.27E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1252 b62a252d9cc5b7d5c51bfc965926f3f6 338 Gene3D G3DSA:3.40.50.300 17 131 1.3E-8 T 11-10-2018 APH_1252 b62a252d9cc5b7d5c51bfc965926f3f6 338 SUPERFAMILY SSF48019 216 326 7.14E-7 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 APH_1152 df3edad4ec6badcf549c960ff7cde4a2 291 Pfam PF01617 Surface antigen 170 286 9.3E-41 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1152 df3edad4ec6badcf549c960ff7cde4a2 291 SUPERFAMILY SSF56925 197 277 2.04E-12 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1152 df3edad4ec6badcf549c960ff7cde4a2 291 Gene3D G3DSA:2.40.160.20 159 285 1.6E-9 T 11-10-2018 APH_0271 42667476d9449671598fb66002924058 97 SUPERFAMILY SSF47729 3 86 5.59E-12 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 APH_0271 42667476d9449671598fb66002924058 97 Gene3D G3DSA:4.10.520.10 1 88 2.3E-10 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 APH_0271 42667476d9449671598fb66002924058 97 Pfam PF00216 Bacterial DNA-binding protein 3 86 1.1E-9 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 APH_0046 ef7e9163e1114470fd23b2bd8460ba9c 101 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 21 97 6.4E-14 T 11-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 33.66 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 Pfam PF00252 Ribosomal protein L16p/L10e 5 133 1.0E-44 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 59 88 3.5E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 25 37 3.5E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 89 118 3.5E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 43 54 3.5E-34 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 Gene3D G3DSA:3.90.1170.10 2 136 2.7E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 SUPERFAMILY SSF54686 3 135 1.02E-50 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0287 ecf6a48c2ef9cb65eb36b86a415b6942 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0683 65a932f55f0b5bc85c855757bbd2cbc8 879 Pfam PF13550 Putative phage tail protein 700 846 3.0E-17 T 11-10-2018 IPR032876 Tip attachment protein J APH_0683 65a932f55f0b5bc85c855757bbd2cbc8 879 SUPERFAMILY SSF51445 446 633 6.19E-6 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily APH_0683 65a932f55f0b5bc85c855757bbd2cbc8 879 Pfam PF13547 GTA TIM-barrel-like domain 391 637 1.3E-31 T 11-10-2018 IPR025195 GTA TIM-barrel-like domain APH_0171 2857ec50a78ca4656bb00daaf1a5da9e 367 SUPERFAMILY SSF56925 39 356 1.79E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0171 2857ec50a78ca4656bb00daaf1a5da9e 367 Pfam PF01617 Surface antigen 39 360 8.5E-51 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0470 4b96084e50889548147c56a0aea68460 483 Pfam PF02934 GatB/GatE catalytic domain 14 294 7.5E-107 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 APH_0470 4b96084e50889548147c56a0aea68460 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 150 164 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 APH_0470 4b96084e50889548147c56a0aea68460 483 Gene3D G3DSA:1.10.150.380 303 420 3.8E-33 T 11-10-2018 APH_0470 4b96084e50889548147c56a0aea68460 483 SUPERFAMILY SSF55931 13 302 3.4E-114 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 APH_0470 4b96084e50889548147c56a0aea68460 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 482 35.828 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APH_0470 4b96084e50889548147c56a0aea68460 483 SUPERFAMILY SSF89095 303 408 1.06E-29 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 APH_0470 4b96084e50889548147c56a0aea68460 483 SMART SM00845 334 481 2.8E-72 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 APH_0470 4b96084e50889548147c56a0aea68460 483 Pfam PF02637 GatB domain 335 481 3.0E-48 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 APH_0470 4b96084e50889548147c56a0aea68460 483 Gene3D G3DSA:1.10.10.410 421 483 4.7E-25 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APH_1275 d35b596291474e2ca7316d26a2eea063 428 SUPERFAMILY SSF56925 39 389 2.01E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1275 d35b596291474e2ca7316d26a2eea063 428 Gene3D G3DSA:2.40.160.20 226 393 1.5E-9 T 11-10-2018 APH_1275 d35b596291474e2ca7316d26a2eea063 428 Pfam PF01617 Surface antigen 39 428 5.8E-81 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1042 d2815f91cbadf689c85b228b452f108f 234 Gene3D G3DSA:1.10.357.10 25 208 9.5E-10 T 11-10-2018 APH_1042 d2815f91cbadf689c85b228b452f108f 234 Pfam PF08511 COQ9 137 212 1.6E-25 T 11-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 APH_0976 861beec0636cb1d5a623b29f0a4116a1 390 SUPERFAMILY SSF55785 254 305 7.67E-5 T 11-10-2018 IPR035965 PAS domain superfamily APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 SUPERFAMILY SSF50129 3 145 1.56E-28 T 11-10-2018 IPR011032 GroES-like superfamily APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 SUPERFAMILY SSF51735 114 262 4.38E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 Gene3D G3DSA:3.40.50.720 124 269 9.8E-85 T 11-10-2018 APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 SMART SM00829 11 323 4.6E-11 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 Pfam PF00107 Zinc-binding dehydrogenase 152 252 6.7E-15 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 2.9E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APH_0257 f881730f28bd7e45cbc9e84c96656cbc 326 Gene3D G3DSA:3.90.180.10 12 319 9.8E-85 T 11-10-2018 APH_0258 f19612b7b43053cbfa86a4fb7f11ac49 788 Gene3D G3DSA:3.40.50.300 446 547 2.9E-10 T 11-10-2018 APH_0258 f19612b7b43053cbfa86a4fb7f11ac49 788 Pfam PF13361 UvrD-like helicase C-terminal domain 363 744 3.8E-21 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APH_0258 f19612b7b43053cbfa86a4fb7f11ac49 788 Pfam PF00580 UvrD/REP helicase N-terminal domain 39 351 1.6E-23 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APH_0258 f19612b7b43053cbfa86a4fb7f11ac49 788 Gene3D G3DSA:3.40.50.300 649 776 2.7E-20 T 11-10-2018 APH_0258 f19612b7b43053cbfa86a4fb7f11ac49 788 SUPERFAMILY SSF52540 22 749 4.78E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0258 f19612b7b43053cbfa86a4fb7f11ac49 788 Gene3D G3DSA:3.40.50.300 235 385 2.7E-28 T 11-10-2018 APH_0399 82ffae870536d632b4da964aa23034cf 264 SUPERFAMILY SSF81345 5 256 2.09E-22 T 11-10-2018 IPR037294 ABC transporter, BtuC-like APH_0399 82ffae870536d632b4da964aa23034cf 264 Pfam PF00950 ABC 3 transport family 8 259 6.9E-51 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 APH_0983 cf149825a3c0a3a358f48af7f066c76f 220 SUPERFAMILY SSF52540 2 212 2.24E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0983 cf149825a3c0a3a358f48af7f066c76f 220 Gene3D G3DSA:3.40.50.300 1 218 3.7E-49 T 11-10-2018 APH_0983 cf149825a3c0a3a358f48af7f066c76f 220 SMART SM00382 26 198 5.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0983 cf149825a3c0a3a358f48af7f066c76f 220 ProSitePatterns PS00211 ABC transporters family signature. 120 134 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0983 cf149825a3c0a3a358f48af7f066c76f 220 Pfam PF00005 ABC transporter 18 147 3.8E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0089 88e0200cf92b76f6a1dcb0308d0260e9 270 Pfam PF01513 ATP-NAD kinase 42 217 4.5E-17 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 APH_0089 88e0200cf92b76f6a1dcb0308d0260e9 270 Hamap MF_00361 NAD kinase [nadK]. 13 270 19.347 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 APH_0089 88e0200cf92b76f6a1dcb0308d0260e9 270 Gene3D G3DSA:3.40.50.10330 22 120 1.1E-9 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 APH_0089 88e0200cf92b76f6a1dcb0308d0260e9 270 Gene3D G3DSA:2.60.200.30 121 245 6.5E-25 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 APH_0089 88e0200cf92b76f6a1dcb0308d0260e9 270 SUPERFAMILY SSF111331 40 256 5.63E-50 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily APH_1175 d5ec1a00493e52b009eec77dcc73a150 37 SUPERFAMILY SSF52833 1 36 3.64E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1175 d5ec1a00493e52b009eec77dcc73a150 37 PRINTS PR00160 Glutaredoxin signature 17 30 6.6E-9 T 11-10-2018 IPR014025 Glutaredoxin subgroup APH_1175 d5ec1a00493e52b009eec77dcc73a150 37 PRINTS PR00160 Glutaredoxin signature 3 16 6.6E-9 T 11-10-2018 IPR014025 Glutaredoxin subgroup APH_1175 d5ec1a00493e52b009eec77dcc73a150 37 Gene3D G3DSA:3.40.30.10 1 37 2.0E-13 T 11-10-2018 APH_1175 d5ec1a00493e52b009eec77dcc73a150 37 Pfam PF00462 Glutaredoxin 2 20 4.2E-5 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 Gene3D G3DSA:3.40.50.300 323 574 4.7E-83 T 11-10-2018 APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 Pfam PF00005 ABC transporter 348 497 3.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 Gene3D G3DSA:1.20.1560.10 1 311 4.8E-55 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 SMART SM00382 357 543 7.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 Pfam PF00664 ABC transporter transmembrane region 15 279 2.5E-32 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 SUPERFAMILY SSF52540 323 568 1.85E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0157 437d0d4d506f80fc48fabab2ca16a9ae 578 SUPERFAMILY SSF90123 4 311 1.83E-55 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 APH_1347 9b00b24ffe99a874c42af40c59ddc34f 102 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 9.1E-14 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family APH_1347 9b00b24ffe99a874c42af40c59ddc34f 102 Gene3D G3DSA:3.30.1310.10 4 100 6.1E-11 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily APH_1347 9b00b24ffe99a874c42af40c59ddc34f 102 SUPERFAMILY SSF82607 7 99 5.49E-13 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily APH_0560 c311a009122f4517e1cb426094fca634 323 Gene3D G3DSA:1.10.620.20 4 310 1.8E-90 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 APH_0560 c311a009122f4517e1cb426094fca634 323 Pfam PF00268 Ribonucleotide reductase, small chain 9 284 8.4E-74 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0560 c311a009122f4517e1cb426094fca634 323 PIRSF PIRSF000355 3 320 2.0E-101 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0560 c311a009122f4517e1cb426094fca634 323 SUPERFAMILY SSF47240 10 321 3.98E-88 T 11-10-2018 IPR009078 Ferritin-like superfamily APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 9 404 53.19 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 Gene3D G3DSA:3.40.640.10 24 270 2.6E-152 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 SUPERFAMILY SSF53383 13 400 2.82E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 PIRSF PIRSF005572 10 393 5.0E-127 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 Pfam PF00266 Aminotransferase class-V 13 377 1.0E-80 T 11-10-2018 IPR000192 Aminotransferase class V domain APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 204 223 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APH_0674 57f9ed9c40b736d66e69f21a4fe99809 412 Gene3D G3DSA:3.90.1150.10 13 383 2.6E-152 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0316 0edf00cda7a46841ceab26fc976fb1b0 345 SUPERFAMILY SSF53659 10 343 2.3E-93 T 11-10-2018 APH_0316 0edf00cda7a46841ceab26fc976fb1b0 345 Pfam PF02504 Fatty acid synthesis protein 10 330 5.0E-96 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 APH_0316 0edf00cda7a46841ceab26fc976fb1b0 345 Gene3D G3DSA:3.40.718.10 7 345 3.3E-113 T 11-10-2018 APH_0316 0edf00cda7a46841ceab26fc976fb1b0 345 PIRSF PIRSF002465 7 345 8.7E-110 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 APH_0316 0edf00cda7a46841ceab26fc976fb1b0 345 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 121.907 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PIRSF PIRSF000349 1 205 5.8E-72 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 88 2.3E-22 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 SUPERFAMILY SSF54719 90 202 2.75E-41 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Gene3D G3DSA:2.40.500.20 92 205 2.3E-39 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 196 1.2E-33 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 SUPERFAMILY SSF46609 1 89 1.09E-24 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 1.1E-14 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 24 37 1.1E-14 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.1E-14 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 1.1E-14 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_0371 b8cedc7a28bc9a3cfe9d1c2f99539fb8 206 Gene3D G3DSA:1.10.287.990 19 87 1.4E-17 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 APH_1086 f39c8aa597612ee9ffe58dedd7f9cb1c 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 69 91 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site APH_1086 f39c8aa597612ee9ffe58dedd7f9cb1c 296 Pfam PF01040 UbiA prenyltransferase family 32 277 5.9E-52 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 APH_1086 f39c8aa597612ee9ffe58dedd7f9cb1c 296 Gene3D G3DSA:1.10.357.140 24 179 7.8E-19 T 11-10-2018 APH_1086 f39c8aa597612ee9ffe58dedd7f9cb1c 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 18.11 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 APH_1100 69bdc90145b58abbf1fdae054d24c3a0 212 Gene3D G3DSA:2.10.109.10 97 211 6.9E-8 T 11-10-2018 APH_1100 69bdc90145b58abbf1fdae054d24c3a0 212 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 14 76 2.2E-9 T 11-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 APH_1100 69bdc90145b58abbf1fdae054d24c3a0 212 SUPERFAMILY SSF47413 10 75 1.6E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 APH_1100 69bdc90145b58abbf1fdae054d24c3a0 212 SUPERFAMILY SSF51306 118 210 2.88E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily APH_1100 69bdc90145b58abbf1fdae054d24c3a0 212 Gene3D G3DSA:1.10.260.40 7 75 1.0E-10 T 11-10-2018 APH_1100 69bdc90145b58abbf1fdae054d24c3a0 212 SMART SM00530 14 70 1.5E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APH_0519 19e6d1f2180a7bf248fd182fa11f8ebf 120 Gene3D G3DSA:1.20.58.1610 1 120 5.7E-35 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0519 19e6d1f2180a7bf248fd182fa11f8ebf 120 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 3 120 16.785 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 APH_0519 19e6d1f2180a7bf248fd182fa11f8ebf 120 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 24 119 3.2E-31 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0642 62f252ae4e266c24062422b1187f8356 143 PIRSF PIRSF005384 3 143 9.3E-50 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APH_0642 62f252ae4e266c24062422b1187f8356 143 Pfam PF02502 Ribose/Galactose Isomerase 5 141 1.5E-47 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APH_0642 62f252ae4e266c24062422b1187f8356 143 SUPERFAMILY SSF89623 3 142 4.71E-48 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APH_0642 62f252ae4e266c24062422b1187f8356 143 Gene3D G3DSA:3.40.1400.10 1 143 5.4E-56 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 APH_0298 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Gene3D G3DSA:3.100.10.10 66 144 7.1E-14 T 11-10-2018 APH_0298 cd835e5ea89a5ddb2ade1b83ec85c17d 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 114 144 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0298 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 143 3.5E-28 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P APH_0298 cd835e5ea89a5ddb2ade1b83ec85c17d 145 SUPERFAMILY SSF52080 4 144 1.13E-31 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily APH_0298 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 16.257 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 Pfam PF00464 Serine hydroxymethyltransferase 10 386 5.7E-161 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 Gene3D G3DSA:3.40.640.10 39 290 2.3E-173 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 224 240 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 Gene3D G3DSA:3.90.1150.10 12 395 2.3E-173 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 SUPERFAMILY SSF53383 10 416 9.71E-165 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 9 422 49.337 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APH_0154 b6d7144abfe439b1da3f9ba1b74223cb 425 PIRSF PIRSF000412 5 418 8.1E-162 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 APH_1394 6e832296e0a74dfc6ebbbbcb2a50625a 202 Gene3D G3DSA:3.10.450.710 37 202 7.9E-18 T 11-10-2018 APH_1394 6e832296e0a74dfc6ebbbbcb2a50625a 202 Pfam PF05494 MlaC protein 57 200 6.8E-24 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APH_0321 7a1f6296dc71cdf7abd2dff060e0d9f6 147 Pfam PF14437 MafB19-like deaminase 6 144 1.3E-25 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 APH_0321 7a1f6296dc71cdf7abd2dff060e0d9f6 147 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 7 144 38.212 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 APH_0321 7a1f6296dc71cdf7abd2dff060e0d9f6 147 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 87 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APH_0321 7a1f6296dc71cdf7abd2dff060e0d9f6 147 Gene3D G3DSA:3.40.140.10 1 147 1.9E-48 T 11-10-2018 APH_0321 7a1f6296dc71cdf7abd2dff060e0d9f6 147 SUPERFAMILY SSF53927 4 144 2.84E-45 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 APH_0985 54d2011d7661346e8bf996fb1d6393dd 178 Pfam PF11412 Disulphide bond corrector protein DsbC 44 154 5.0E-13 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 2.8E-32 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 Gene3D G3DSA:2.40.50.100 590 656 5.9E-18 T 11-10-2018 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.3E-77 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF51246 332 446 1.26E-34 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF51230 589 655 8.64E-17 T 11-10-2018 IPR011053 Single hybrid motif APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 SMART SM00878 336 443 2.3E-49 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.3E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF52440 1 113 1.37E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 SUPERFAMILY SSF56059 83 349 1.77E-69 T 11-10-2018 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 613 630 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 Gene3D G3DSA:3.30.470.130 1 447 2.4E-190 T 11-10-2018 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APH_0364 c0a60aa98af3ff2221011ae72a43f81c 659 Pfam PF00364 Biotin-requiring enzyme 593 655 9.1E-13 T 11-10-2018 IPR000089 Biotin/lipoyl attachment APH_0830 3019efee75ba89b245895c895213462a 58 Gene3D G3DSA:3.40.50.150 1 58 4.8E-8 T 11-10-2018 APH_0830 3019efee75ba89b245895c895213462a 58 Pfam PF01728 FtsJ-like methyltransferase 6 56 6.6E-6 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APH_0396 cf8beb00730c2a9161b6773f7bdcd91d 193 PIRSF PIRSF006305 1 190 1.0E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 APH_0396 cf8beb00730c2a9161b6773f7bdcd91d 193 Pfam PF02545 Maf-like protein 4 184 2.5E-46 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 APH_0396 cf8beb00730c2a9161b6773f7bdcd91d 193 Gene3D G3DSA:3.90.950.10 3 189 7.8E-54 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APH_0396 cf8beb00730c2a9161b6773f7bdcd91d 193 Hamap MF_00528 Septum formation protein Maf [maf]. 3 190 26.54 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 APH_0396 cf8beb00730c2a9161b6773f7bdcd91d 193 SUPERFAMILY SSF52972 3 184 9.81E-53 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like APH_0626 65505f3de958c15372ce2eeb27d08875 342 Gene3D G3DSA:3.30.420.40 6 321 3.2E-118 T 11-10-2018 APH_0626 65505f3de958c15372ce2eeb27d08875 342 Gene3D G3DSA:3.30.420.40 129 299 3.2E-118 T 11-10-2018 APH_0626 65505f3de958c15372ce2eeb27d08875 342 Pfam PF00814 Glycoprotease family 25 313 2.3E-90 T 11-10-2018 IPR000905 Gcp-like domain APH_0626 65505f3de958c15372ce2eeb27d08875 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 338 58.458 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 APH_0626 65505f3de958c15372ce2eeb27d08875 342 SUPERFAMILY SSF53067 5 316 8.64E-41 T 11-10-2018 APH_0626 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.3E-46 T 11-10-2018 IPR017861 Kae1/TsaD family APH_0626 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 7.3E-46 T 11-10-2018 IPR017861 Kae1/TsaD family APH_0626 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 7.3E-46 T 11-10-2018 IPR017861 Kae1/TsaD family APH_0626 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.3E-46 T 11-10-2018 IPR017861 Kae1/TsaD family APH_0626 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 7.3E-46 T 11-10-2018 IPR017861 Kae1/TsaD family APH_0626 65505f3de958c15372ce2eeb27d08875 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 7.3E-46 T 11-10-2018 IPR017861 Kae1/TsaD family APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Hamap MF_01884 Transcription termination factor Rho [rho]. 32 452 205.668 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00959 36 78 2.4E-11 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:1.10.720.10 32 77 1.4E-9 T 11-10-2018 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF52540 122 405 7.09E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00357 83 149 2.4E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF07497 Rho termination factor, RNA-binding domain 84 154 2.8E-25 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:2.40.50.140 78 154 2.2E-27 T 11-10-2018 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00382 204 384 8.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF50249 82 153 2.74E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:3.40.50.300 161 451 6.5E-124 T 11-10-2018 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 193 397 1.7E-27 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF68912 32 77 3.81E-8 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily APH_0064 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF07498 Rho termination factor, N-terminal domain 36 74 1.3E-8 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_1298 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF52540 204 460 8.04E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1298 d40686d6eb771780ced2095205c91795 702 SMART SM00487 282 470 7.7E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain APH_1298 d40686d6eb771780ced2095205c91795 702 Pfam PF00270 DEAD/DEAH box helicase 288 447 1.1E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APH_1298 d40686d6eb771780ced2095205c91795 702 Gene3D G3DSA:3.40.50.300 227 460 2.2E-73 T 11-10-2018 APH_1298 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF50249 30 200 2.4E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_1298 d40686d6eb771780ced2095205c91795 702 SMART SM00490 515 599 1.4E-17 T 11-10-2018 IPR001650 Helicase, C-terminal APH_1298 d40686d6eb771780ced2095205c91795 702 Pfam PF00271 Helicase conserved C-terminal domain 483 598 1.1E-15 T 11-10-2018 IPR001650 Helicase, C-terminal APH_1298 d40686d6eb771780ced2095205c91795 702 Pfam PF17191 RecG wedge domain 34 198 6.4E-10 T 11-10-2018 IPR033454 RecG, wedge domain APH_1298 d40686d6eb771780ced2095205c91795 702 Gene3D G3DSA:2.40.50.140 71 168 4.4E-10 T 11-10-2018 APH_1298 d40686d6eb771780ced2095205c91795 702 Gene3D G3DSA:3.40.50.300 468 639 2.8E-46 T 11-10-2018 APH_1298 d40686d6eb771780ced2095205c91795 702 SUPERFAMILY SSF52540 310 659 4.11E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 Gene3D G3DSA:3.40.50.300 6 192 7.1E-62 T 11-10-2018 APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 SUPERFAMILY SSF52540 6 192 5.02E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 Hamap MF_00328 Guanylate kinase [gmk]. 4 189 32.517 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 Gene3D G3DSA:3.30.63.10 38 97 7.1E-62 T 11-10-2018 APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 SMART SM00072 5 189 4.2E-50 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_0170 f12c559d549cde73e463ecaa545ca4f2 210 Pfam PF00625 Guanylate kinase 9 187 7.9E-44 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_1291 76c021fa8b2bd0afb300bea833fae16c 135 Gene3D G3DSA:3.10.590.10 4 135 2.4E-40 T 11-10-2018 APH_1291 76c021fa8b2bd0afb300bea833fae16c 135 Pfam PF01878 EVE domain 5 132 1.7E-34 T 11-10-2018 IPR002740 EVE domain APH_1291 76c021fa8b2bd0afb300bea833fae16c 135 SUPERFAMILY SSF88697 2 134 9.94E-43 T 11-10-2018 IPR015947 PUA-like superfamily APH_0731 5affaf954099bc7f6dc59fc0afc464a4 171 PIRSF PIRSF000216 1 171 1.6E-66 T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0731 5affaf954099bc7f6dc59fc0afc464a4 171 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 11-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0731 5affaf954099bc7f6dc59fc0afc464a4 171 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 165 1.1E-57 T 11-10-2018 APH_0731 5affaf954099bc7f6dc59fc0afc464a4 171 Gene3D G3DSA:3.40.30.10 84 171 4.3E-30 T 11-10-2018 APH_0731 5affaf954099bc7f6dc59fc0afc464a4 171 Gene3D G3DSA:1.10.10.1590 9 83 2.0E-23 T 11-10-2018 APH_0731 5affaf954099bc7f6dc59fc0afc464a4 171 SUPERFAMILY SSF52833 11 168 4.14E-52 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 1.1E-123 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 SUPERFAMILY SSF55681 1 280 3.23E-112 T 11-10-2018 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.351 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:1.20.58.180 206 282 1.8E-25 T 11-10-2018 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0013 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:3.30.930.10 1 205 1.8E-92 T 11-10-2018 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 1.1E-123 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 SUPERFAMILY SSF55681 1 280 3.23E-112 T 11-10-2018 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.351 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:1.20.58.180 206 282 1.8E-25 T 11-10-2018 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.3E-49 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0165 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:3.30.930.10 1 205 1.8E-92 T 11-10-2018 APH_0796 292901165a5665e14135cc1e403d65ed 1114 SUPERFAMILY SSF47323 703 956 7.66E-42 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0796 292901165a5665e14135cc1e403d65ed 1114 SUPERFAMILY SSF52374 27 680 1.13E-127 T 11-10-2018 APH_0796 292901165a5665e14135cc1e403d65ed 1114 Gene3D G3DSA:3.40.50.620 35 673 2.1E-226 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0796 292901165a5665e14135cc1e403d65ed 1114 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 68 79 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0796 292901165a5665e14135cc1e403d65ed 1114 Gene3D G3DSA:3.90.740.10 219 437 2.1E-226 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APH_0796 292901165a5665e14135cc1e403d65ed 1114 Pfam PF08264 Anticodon-binding domain of tRNA 737 891 1.1E-23 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 APH_0796 292901165a5665e14135cc1e403d65ed 1114 SUPERFAMILY SSF50677 222 433 1.78E-46 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 APH_0796 292901165a5665e14135cc1e403d65ed 1114 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 579 9.2E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APH_0796 292901165a5665e14135cc1e403d65ed 1114 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 61 72 9.2E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APH_0796 292901165a5665e14135cc1e403d65ed 1114 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 431 446 9.2E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APH_0796 292901165a5665e14135cc1e403d65ed 1114 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 251 274 9.2E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APH_0796 292901165a5665e14135cc1e403d65ed 1114 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 606 615 9.2E-30 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 APH_0796 292901165a5665e14135cc1e403d65ed 1114 Gene3D G3DSA:1.10.730.10 691 885 4.0E-44 T 11-10-2018 APH_0796 292901165a5665e14135cc1e403d65ed 1114 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 23 1103 13.626 T 11-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 APH_0796 292901165a5665e14135cc1e403d65ed 1114 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 38 680 1.6E-188 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0296 265102eb1de382fc4cded2587db2b53e 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 121 1.0E-28 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0296 265102eb1de382fc4cded2587db2b53e 121 SUPERFAMILY SSF53137 8 118 1.07E-34 T 11-10-2018 APH_0296 265102eb1de382fc4cded2587db2b53e 121 Gene3D G3DSA:3.30.420.100 5 121 1.1E-30 T 11-10-2018 APH_0296 265102eb1de382fc4cded2587db2b53e 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 22.356 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.746 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.2E-11 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.2E-11 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.2E-11 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 Pfam PF01632 Ribosomal protein L35 2 58 4.5E-18 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 Gene3D G3DSA:2.40.50.530 1 64 1.5E-20 T 11-10-2018 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 SUPERFAMILY SSF143034 2 64 5.76E-19 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0061 3fd4aca7dea9181d812224aef559f3a5 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1107 373447e9ac7999c0223cc6100dadd916 149 ProSitePatterns PS00360 Ribosomal protein S9 signature. 88 106 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APH_1107 373447e9ac7999c0223cc6100dadd916 149 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 20 149 28.969 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid APH_1107 373447e9ac7999c0223cc6100dadd916 149 SUPERFAMILY SSF54211 24 149 1.48E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold APH_1107 373447e9ac7999c0223cc6100dadd916 149 Pfam PF00380 Ribosomal protein S9/S16 29 149 8.8E-42 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APH_1107 373447e9ac7999c0223cc6100dadd916 149 Gene3D G3DSA:3.30.230.10 21 149 2.6E-46 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APH_1056 8b4e9341cde3dbac3f9e75296670ff8b 269 Gene3D G3DSA:3.40.50.620 1 93 8.4E-19 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1056 8b4e9341cde3dbac3f9e75296670ff8b 269 SUPERFAMILY SSF52402 3 67 4.57E-17 T 11-10-2018 APH_1056 8b4e9341cde3dbac3f9e75296670ff8b 269 Pfam PF01171 PP-loop family 3 64 4.5E-16 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 APH_1093 8b4e9341cde3dbac3f9e75296670ff8b 269 Gene3D G3DSA:3.40.50.620 1 93 8.4E-19 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1093 8b4e9341cde3dbac3f9e75296670ff8b 269 SUPERFAMILY SSF52402 3 67 4.57E-17 T 11-10-2018 APH_1093 8b4e9341cde3dbac3f9e75296670ff8b 269 Pfam PF01171 PP-loop family 3 64 4.5E-16 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 APH_0627 eeed3f60b0d94c65aa96ccadc8a449cd 201 Pfam PF06271 RDD family 37 184 1.4E-19 T 11-10-2018 IPR010432 RDD APH_0054 3db7bafa3c5c9b8544d5324fcba0073e 96 SUPERFAMILY SSF54565 3 80 2.49E-30 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0054 3db7bafa3c5c9b8544d5324fcba0073e 96 Pfam PF00886 Ribosomal protein S16 9 70 2.9E-25 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0054 3db7bafa3c5c9b8544d5324fcba0073e 96 Gene3D G3DSA:3.30.1320.10 1 96 1.2E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0054 3db7bafa3c5c9b8544d5324fcba0073e 96 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.903 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1398 f243666169f8416d39339275686e5451 144 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 94 129 4.4E-11 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APH_1398 f243666169f8416d39339275686e5451 144 SUPERFAMILY SSF57716 96 134 7.84E-9 T 11-10-2018 APH_1398 f243666169f8416d39339275686e5451 144 SUPERFAMILY SSF109635 12 94 3.4E-22 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily APH_1398 f243666169f8416d39339275686e5451 144 Gene3D G3DSA:1.20.120.910 5 136 1.6E-34 T 11-10-2018 APH_0929 0dec09af6fd9de12109bf328738b9b64 84 Pfam PF00550 Phosphopantetheine attachment site 17 77 1.2E-10 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain APH_0929 0dec09af6fd9de12109bf328738b9b64 84 Gene3D G3DSA:1.10.1200.10 1 84 7.3E-28 T 11-10-2018 IPR036736 ACP-like superfamily APH_0929 0dec09af6fd9de12109bf328738b9b64 84 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 77 8.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 APH_0929 0dec09af6fd9de12109bf328738b9b64 84 ProSitePatterns PS00012 Phosphopantetheine attachment site. 36 51 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site APH_0929 0dec09af6fd9de12109bf328738b9b64 84 Hamap MF_01217 Acyl carrier protein [acpP]. 4 81 14.432 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 APH_0929 0dec09af6fd9de12109bf328738b9b64 84 SUPERFAMILY SSF47336 3 81 3.27E-15 T 11-10-2018 IPR036736 ACP-like superfamily APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 3.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF00679 Elongation factor G C-terminus 401 483 2.3E-19 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.30.70.870 288 369 1.0E-32 T 11-10-2018 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 SMART SM00838 403 488 0.0014 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF52540 2 207 2.17E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:2.40.30.10 188 287 4.3E-31 T 11-10-2018 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.40.50.300 2 187 4.1E-70 T 11-10-2018 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF00009 Elongation factor Tu GTP binding domain 5 183 1.2E-50 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 8.9E-47 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.30.70.3380 370 479 1.7E-38 T 11-10-2018 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Gene3D G3DSA:3.30.70.2570 481 555 1.8E-31 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 9.4E-8 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF54980 295 372 1.29E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 275.071 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF50447 167 290 8.73E-28 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_0765 ebb23412a901dfb0602f19e8c549aeb0 598 SUPERFAMILY SSF54980 401 495 3.6E-23 T 11-10-2018 IPR035647 EF-G domain III/V-like APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 Gene3D G3DSA:3.30.540.10 4 142 2.0E-23 T 11-10-2018 APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 Pfam PF00459 Inositol monophosphatase family 43 211 1.6E-13 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 SUPERFAMILY SSF56655 6 249 4.32E-32 T 11-10-2018 APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 5.5E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 5.5E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 5.5E-7 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 APH_0548 0315a028e86386607c6f2ef28fc2ada5 256 Gene3D G3DSA:3.40.190.80 149 252 2.9E-5 T 11-10-2018 APH_0795 934c63d4cd8d660ff93f2bd96e168652 154 SUPERFAMILY SSF52833 4 154 1.43E-46 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0795 934c63d4cd8d660ff93f2bd96e168652 154 Gene3D G3DSA:3.40.30.10 5 153 1.6E-42 T 11-10-2018 APH_0795 934c63d4cd8d660ff93f2bd96e168652 154 PIRSF PIRSF000239 1 154 6.2E-25 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0795 934c63d4cd8d660ff93f2bd96e168652 154 Pfam PF00578 AhpC/TSA family 6 132 5.4E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0345 cf2ee74d94d6b73c018714129a86c309 636 Pfam PF10150 Ribonuclease E/G family 199 469 5.4E-85 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APH_0345 cf2ee74d94d6b73c018714129a86c309 636 Gene3D G3DSA:3.40.1260.20 478 586 3.5E-16 T 11-10-2018 APH_0345 cf2ee74d94d6b73c018714129a86c309 636 SUPERFAMILY SSF50249 49 202 5.01E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_1312 f82ab9a05d6d47e0b42a1a1c3f38ae7a 291 Pfam PF01617 Surface antigen 132 291 8.7E-52 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1312 f82ab9a05d6d47e0b42a1a1c3f38ae7a 291 Gene3D G3DSA:2.40.160.20 63 253 9.9E-10 T 11-10-2018 APH_1312 f82ab9a05d6d47e0b42a1a1c3f38ae7a 291 SUPERFAMILY SSF56925 169 291 8.63E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0082 1cc9d9d7fc0a35f98746c075594c53d4 345 SUPERFAMILY SSF52518 26 345 1.08E-103 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_0082 1cc9d9d7fc0a35f98746c075594c53d4 345 Pfam PF00676 Dehydrogenase E1 component 39 336 3.5E-101 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 APH_0082 1cc9d9d7fc0a35f98746c075594c53d4 345 Gene3D G3DSA:3.40.50.970 1 345 8.1E-131 T 11-10-2018 APH_0664 0d6807f13407cf7fbf65d1a083414020 435 SUPERFAMILY SSF56925 45 435 6.91E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0664 0d6807f13407cf7fbf65d1a083414020 435 Pfam PF01617 Surface antigen 44 435 5.2E-60 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0664 0d6807f13407cf7fbf65d1a083414020 435 Gene3D G3DSA:2.40.160.20 230 401 3.4E-7 T 11-10-2018 APH_0040 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Gene3D G3DSA:1.10.443.10 110 300 5.3E-48 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 APH_0040 2bc58b0d79d002e7c47d6cd2be47a1c0 311 SUPERFAMILY SSF56349 8 299 3.53E-47 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APH_0040 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Pfam PF00589 Phage integrase family 111 292 2.5E-36 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APH_0040 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 87 5.4E-13 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APH_0040 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Gene3D G3DSA:1.10.150.130 4 97 4.5E-19 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal APH_0607 16cedd64b575f3e9bebaea353873106d 514 Pfam PF01921 tRNA synthetases class I (K) 7 353 1.5E-128 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APH_0607 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:1.10.10.350 419 509 2.3E-17 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0607 16cedd64b575f3e9bebaea353873106d 514 SUPERFAMILY SSF48163 321 508 1.31E-29 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0607 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:3.40.50.620 13 272 2.4E-75 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0607 16cedd64b575f3e9bebaea353873106d 514 SUPERFAMILY SSF52374 8 314 6.7E-56 T 11-10-2018 APH_0607 16cedd64b575f3e9bebaea353873106d 514 Gene3D G3DSA:2.30.30.300 174 219 2.4E-75 T 11-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 APH_0607 16cedd64b575f3e9bebaea353873106d 514 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 6 510 28.444 T 11-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APH_0607 16cedd64b575f3e9bebaea353873106d 514 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 43 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 SUPERFAMILY SSF50447 496 578 6.03E-23 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Gene3D G3DSA:2.40.30.10 494 607 8.1E-36 T 11-10-2018 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 ProSitePatterns PS01176 Initiation factor 2 signature. 773 795 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 16 820 15.017 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 SUPERFAMILY SSF50447 724 818 7.07E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 SUPERFAMILY SSF52540 318 492 1.33E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Gene3D G3DSA:3.40.50.300 320 493 3.1E-68 T 11-10-2018 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 SUPERFAMILY SSF52156 614 729 2.62E-31 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Gene3D G3DSA:3.40.50.10050 616 723 1.0E-33 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Pfam PF00009 Elongation factor Tu GTP binding domain 327 483 2.5E-31 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 247 296 1.3E-8 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Pfam PF11987 Translation-initiation factor 2 611 711 1.1E-31 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 APH_0446 273411a2b7cb315d05c138b5fc1cb2e9 823 Gene3D G3DSA:2.40.30.10 724 820 3.1E-23 T 11-10-2018 APH_0311 4bb5e2b8689625fcd60fff8cd279e1b3 164 SMART SM00903 16 159 4.4E-52 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 APH_0311 4bb5e2b8689625fcd60fff8cd279e1b3 164 Gene3D G3DSA:2.30.110.10 1 163 1.4E-46 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 APH_0311 4bb5e2b8689625fcd60fff8cd279e1b3 164 SUPERFAMILY SSF50475 6 161 8.83E-45 T 11-10-2018 APH_0311 4bb5e2b8689625fcd60fff8cd279e1b3 164 Pfam PF01613 Flavin reductase like domain 16 160 3.5E-36 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 APH_0380 3d46bf5f150c65bb11304c944dafac4e 324 Gene3D G3DSA:3.40.1010.20 13 286 3.8E-106 T 11-10-2018 APH_0380 3d46bf5f150c65bb11304c944dafac4e 324 Gene3D G3DSA:3.40.50.11270 19 105 3.8E-106 T 11-10-2018 APH_0380 3d46bf5f150c65bb11304c944dafac4e 324 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 8 292 36.014 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 APH_0380 3d46bf5f150c65bb11304c944dafac4e 324 Pfam PF02401 LytB protein 10 287 3.9E-89 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 APH_0380 3d46bf5f150c65bb11304c944dafac4e 324 Gene3D G3DSA:3.40.1010.20 106 202 3.8E-106 T 11-10-2018 APH_1319 9d25f7e39ada4f46659d7dee39ab61df 314 Pfam PF00925 GTP cyclohydrolase II 138 290 7.5E-50 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 APH_1319 9d25f7e39ada4f46659d7dee39ab61df 314 SUPERFAMILY SSF142695 138 293 9.02E-47 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 APH_1319 9d25f7e39ada4f46659d7dee39ab61df 314 Gene3D G3DSA:3.40.50.10990 123 293 2.4E-53 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 APH_0093 cf5e726667835bec6c0fb1d5434a31a6 219 Pfam PF02223 Thymidylate kinase 5 177 1.8E-43 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APH_0093 cf5e726667835bec6c0fb1d5434a31a6 219 SUPERFAMILY SSF52540 1 190 3.96E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0093 cf5e726667835bec6c0fb1d5434a31a6 219 Hamap MF_00165 Thymidylate kinase [tmk]. 1 206 25.5 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 APH_0093 cf5e726667835bec6c0fb1d5434a31a6 219 Gene3D G3DSA:3.40.50.300 1 204 1.0E-56 T 11-10-2018 APH_0093 cf5e726667835bec6c0fb1d5434a31a6 219 ProSitePatterns PS01331 Thymidylate kinase signature. 92 104 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 APH_0482 649db6fb2d306120c1638637445ebb6f 423 Gene3D G3DSA:3.90.1150.10 11 407 2.2E-130 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0482 649db6fb2d306120c1638637445ebb6f 423 PIRSF PIRSF000521 27 421 1.4E-29 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_0482 649db6fb2d306120c1638637445ebb6f 423 Gene3D G3DSA:3.40.640.10 61 324 2.2E-130 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0482 649db6fb2d306120c1638637445ebb6f 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_0482 649db6fb2d306120c1638637445ebb6f 423 Pfam PF00202 Aminotransferase class-III 26 416 2.0E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APH_0482 649db6fb2d306120c1638637445ebb6f 423 SUPERFAMILY SSF53383 14 417 1.19E-109 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Gene3D G3DSA:3.10.50.40 161 260 8.8E-55 T 11-10-2018 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 SUPERFAMILY SSF102735 8 140 4.19E-24 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 SUPERFAMILY SSF109998 265 434 1.96E-26 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Gene3D G3DSA:1.10.3120.10 127 421 8.8E-55 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Gene3D G3DSA:3.30.70.1050 4 126 1.7E-20 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Pfam PF05697 Bacterial trigger factor protein (TF) 12 154 1.1E-27 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Hamap MF_00303 Trigger factor [tig]. 5 423 15.587 T 11-10-2018 IPR005215 Trigger factor GO:0015031 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 295 417 2.2E-13 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 SUPERFAMILY SSF54534 143 253 5.5E-21 T 11-10-2018 APH_0971 8d1ea24a1264a5a5e945552839591c54 439 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 173 244 6.9E-11 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain APH_0971 8d1ea24a1264a5a5e945552839591c54 439 PIRSF PIRSF003095 5 437 1.2E-73 T 11-10-2018 IPR005215 Trigger factor GO:0015031 APH_1306 c6a6b4c0eba15745a44198d560e6eeed 190 Pfam PF00578 AhpC/TSA family 15 132 1.1E-14 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_1306 c6a6b4c0eba15745a44198d560e6eeed 190 Gene3D G3DSA:3.40.30.10 7 188 1.5E-39 T 11-10-2018 APH_1306 c6a6b4c0eba15745a44198d560e6eeed 190 SUPERFAMILY SSF52833 6 183 1.01E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0096 fcbf0e1628ec34e7e57d4d17067ec9c0 241 PIRSF PIRSF031890 25 241 4.2E-60 T 11-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related APH_0096 fcbf0e1628ec34e7e57d4d17067ec9c0 241 SMART SM00978 96 240 1.9E-34 T 11-10-2018 IPR007379 Tim44-like domain APH_0096 fcbf0e1628ec34e7e57d4d17067ec9c0 241 SUPERFAMILY SSF54427 94 240 5.52E-39 T 11-10-2018 IPR032710 NTF2-like domain superfamily APH_0096 fcbf0e1628ec34e7e57d4d17067ec9c0 241 Gene3D G3DSA:3.10.450.240 80 240 5.6E-29 T 11-10-2018 APH_0096 fcbf0e1628ec34e7e57d4d17067ec9c0 241 Pfam PF04280 Tim44-like domain 99 240 4.5E-33 T 11-10-2018 IPR007379 Tim44-like domain APH_0096 fcbf0e1628ec34e7e57d4d17067ec9c0 241 ProDom PD111165 RP434 80 238 0.005 T 11-10-2018 APH_0043 1c58fe5dcdfed9b986c119b5f6028295 908 Pfam PF13502 AsmA-like C-terminal region 677 849 6.0E-8 T 11-10-2018 IPR032712 AsmA-like, C-terminal APH_0693 19070d6ebdaf45f4e8165e9efecd57bf 174 Gene3D G3DSA:3.40.50.10420 1 174 6.1E-35 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily APH_0693 19070d6ebdaf45f4e8165e9efecd57bf 174 PIRSF PIRSF006806 2 172 3.6E-30 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase APH_0693 19070d6ebdaf45f4e8165e9efecd57bf 174 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 169 2.4E-22 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase APH_0693 19070d6ebdaf45f4e8165e9efecd57bf 174 SUPERFAMILY SSF100950 6 173 3.77E-38 T 11-10-2018 IPR037171 NagB/RpiA transferase-like APH_0038 0e528342019e403a6b438890ce42cb09 541 Gene3D G3DSA:3.40.50.880 290 541 2.4E-89 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0038 0e528342019e403a6b438890ce42cb09 541 Pfam PF00117 Glutamine amidotransferase class-I 307 528 8.3E-51 T 11-10-2018 IPR017926 Glutamine amidotransferase APH_0038 0e528342019e403a6b438890ce42cb09 541 SUPERFAMILY SSF52540 8 275 6.76E-113 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0038 0e528342019e403a6b438890ce42cb09 541 Hamap MF_01227 CTP synthase [pyrG]. 8 535 46.163 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 APH_0038 0e528342019e403a6b438890ce42cb09 541 SUPERFAMILY SSF52317 294 535 5.35E-72 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0038 0e528342019e403a6b438890ce42cb09 541 Pfam PF06418 CTP synthase N-terminus 9 270 1.0E-114 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 APH_0038 0e528342019e403a6b438890ce42cb09 541 Gene3D G3DSA:3.40.50.300 6 289 3.1E-119 T 11-10-2018 APH_1045 18e7b777619cf56ca17c4060a62e4812 544 SUPERFAMILY SSF161098 284 530 2.24E-34 T 11-10-2018 IPR035906 MetI-like superfamily APH_1045 18e7b777619cf56ca17c4060a62e4812 544 Gene3D G3DSA:1.10.3720.10 6 263 7.7E-36 T 11-10-2018 IPR035906 MetI-like superfamily APH_1045 18e7b777619cf56ca17c4060a62e4812 544 Gene3D G3DSA:1.10.3720.10 283 538 4.3E-32 T 11-10-2018 IPR035906 MetI-like superfamily APH_1045 18e7b777619cf56ca17c4060a62e4812 544 SUPERFAMILY SSF161098 8 259 3.38E-30 T 11-10-2018 IPR035906 MetI-like superfamily APH_1045 18e7b777619cf56ca17c4060a62e4812 544 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 526 4.3E-8 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 APH_1045 18e7b777619cf56ca17c4060a62e4812 544 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 253 2.5E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.30.420.40 182 333 3.9E-80 T 11-10-2018 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 SUPERFAMILY SSF53067 183 359 1.6E-33 T 11-10-2018 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Pfam PF14450 Cell division protein FtsA 193 356 8.9E-18 T 11-10-2018 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Pfam PF02491 SHS2 domain inserted in FTSA 74 147 7.7E-11 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.30.420.40 2 352 3.9E-80 T 11-10-2018 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 392 19.419 T 11-10-2018 IPR020823 Cell division protein FtsA APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.30.1490.110 73 154 3.9E-80 T 11-10-2018 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 PIRSF PIRSF003101 1 391 1.3E-92 T 11-10-2018 IPR020823 Cell division protein FtsA APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 SMART SM00842 1 181 4.8E-52 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 SUPERFAMILY SSF53067 2 182 1.77E-32 T 11-10-2018 APH_1164 754fc6b3fc19da6e5138f57cdfb81acd 394 Gene3D G3DSA:3.90.640.10 220 284 3.9E-80 T 11-10-2018 APH_0775 33dae0b8a0ee4d70c8dd7b8688d6c95f 157 SUPERFAMILY SSF101738 3 116 2.94E-37 T 11-10-2018 IPR036760 SspB-like superfamily APH_0775 33dae0b8a0ee4d70c8dd7b8688d6c95f 157 Gene3D G3DSA:2.30.30.220 1 117 7.0E-37 T 11-10-2018 IPR036760 SspB-like superfamily APH_0775 33dae0b8a0ee4d70c8dd7b8688d6c95f 157 Pfam PF04386 Stringent starvation protein B 11 128 1.5E-24 T 11-10-2018 IPR007481 Stringent starvation protein B APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 99 107 9.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 75 88 9.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 231 243 9.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 250 265 9.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 265 276 9.9E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 Gene3D G3DSA:1.10.10.10 211 284 1.5E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 SUPERFAMILY SSF88946 9 119 1.02E-34 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 Pfam PF04542 Sigma-70 region 2 51 119 2.3E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 Pfam PF04545 Sigma-70, region 4 227 277 2.0E-12 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 SUPERFAMILY SSF88659 191 285 3.27E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like APH_0759 337e9fa2aa6db91dc79f38d8c7028133 289 Gene3D G3DSA:1.20.120.1810 15 118 5.9E-29 T 11-10-2018 APH_1228 844e4d61e82eee2042808fd9b0d46e7c 225 SUPERFAMILY SSF52540 3 211 9.18E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1228 844e4d61e82eee2042808fd9b0d46e7c 225 Gene3D G3DSA:3.40.50.300 2 211 6.8E-51 T 11-10-2018 APH_1228 844e4d61e82eee2042808fd9b0d46e7c 225 Pfam PF13500 AAA domain 3 198 7.1E-31 T 11-10-2018 APH_1228 844e4d61e82eee2042808fd9b0d46e7c 225 PIRSF PIRSF006755 1 213 1.2E-35 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 APH_1228 844e4d61e82eee2042808fd9b0d46e7c 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 214 20.221 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 APH_1205 6c28dab966ca95a7752f8f9f0af82f7a 420 SUPERFAMILY SSF81442 2 411 2.49E-36 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1205 6c28dab966ca95a7752f8f9f0af82f7a 420 Gene3D G3DSA:1.20.210.10 1 419 1.5E-29 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1205 6c28dab966ca95a7752f8f9f0af82f7a 420 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 2 374 6.2E-11 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 365 545 2.59E-25 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF00805 Pentapeptide repeats (8 copies) 253 290 8.6E-7 T 11-10-2018 IPR001646 Pentapeptide repeat APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF00805 Pentapeptide repeats (8 copies) 213 252 1.7E-4 T 11-10-2018 IPR001646 Pentapeptide repeat APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 34 96 1.2E-10 T 11-10-2018 IPR001646 Pentapeptide repeat APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 138 198 3.3E-7 T 11-10-2018 IPR001646 Pentapeptide repeat APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 331 413 4.1E-9 T 11-10-2018 IPR001646 Pentapeptide repeat APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Pfam PF13599 Pentapeptide repeats (9 copies) 482 544 4.0E-10 T 11-10-2018 IPR001646 Pentapeptide repeat APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Gene3D G3DSA:2.160.20.100 365 449 1.6E-9 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Gene3D G3DSA:2.160.20.100 467 554 2.1E-17 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Gene3D G3DSA:2.160.20.80 113 287 4.3E-31 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Gene3D G3DSA:2.160.20.80 16 112 2.7E-17 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 32 163 1.31E-27 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 Gene3D G3DSA:2.160.20.100 288 364 6.0E-11 T 11-10-2018 APH_1170 55160f92ca8e541a28af1d5d810659a2 564 SUPERFAMILY SSF141571 136 285 7.85E-30 T 11-10-2018 APH_1213 bfca3ccc1a0a7f264277b107bba6417a 402 SUPERFAMILY SSF52833 290 398 1.39E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1213 bfca3ccc1a0a7f264277b107bba6417a 402 Pfam PF13899 Thioredoxin-like 296 373 2.8E-6 T 11-10-2018 APH_1213 bfca3ccc1a0a7f264277b107bba6417a 402 Gene3D G3DSA:3.40.30.10 291 398 2.0E-6 T 11-10-2018 APH_0268 0c6fa27418038f173c2f5aa236a1ca75 149 SUPERFAMILY SSF52518 5 144 1.06E-54 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_0268 0c6fa27418038f173c2f5aa236a1ca75 149 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 144 4.7E-61 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 APH_0268 0c6fa27418038f173c2f5aa236a1ca75 149 Gene3D G3DSA:3.40.50.970 3 145 5.4E-55 T 11-10-2018 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 443 206.353 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 184 388 1.6E-27 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF52540 113 396 6.48E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1071 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF50249 73 144 2.68E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_1071 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00959 27 69 2.4E-11 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF07497 Rho termination factor, RNA-binding domain 75 145 2.7E-25 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00382 195 375 8.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:3.40.50.300 152 442 6.1E-124 T 11-10-2018 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00357 74 140 2.4E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:2.40.50.140 69 145 2.1E-27 T 11-10-2018 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:1.10.720.10 23 68 1.4E-9 T 11-10-2018 APH_1071 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF68912 23 68 3.69E-8 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily APH_1071 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF07498 Rho termination factor, N-terminal domain 27 65 1.3E-8 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 Pfam PF13361 UvrD-like helicase C-terminal domain 295 623 1.0E-65 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 SUPERFAMILY SSF52540 20 650 3.55E-160 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 Gene3D G3DSA:3.40.50.300 28 291 9.6E-92 T 11-10-2018 APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 Pfam PF00580 UvrD/REP helicase N-terminal domain 28 289 1.9E-70 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 Gene3D G3DSA:3.40.50.300 298 641 3.9E-110 T 11-10-2018 APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 Gene3D G3DSA:1.10.486.10 398 554 3.9E-110 T 11-10-2018 APH_0903 9e8b3c25d2b0424ebbb0e34c7a2707bd 659 Gene3D G3DSA:1.10.10.160 127 207 9.6E-92 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily APH_0910 469339e54f84978faf9c44a1c355e345 378 Gene3D G3DSA:2.40.30.10 289 374 3.5E-14 T 11-10-2018 APH_0910 469339e54f84978faf9c44a1c355e345 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 19 369 36.935 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 APH_0910 469339e54f84978faf9c44a1c355e345 378 Pfam PF03054 tRNA methyl transferase 20 368 3.5E-110 T 11-10-2018 APH_0910 469339e54f84978faf9c44a1c355e345 378 Gene3D G3DSA:3.40.50.620 12 224 2.0E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0910 469339e54f84978faf9c44a1c355e345 378 Gene3D G3DSA:2.30.30.280 230 288 9.8E-17 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 APH_0910 469339e54f84978faf9c44a1c355e345 378 SUPERFAMILY SSF52402 19 259 1.26E-49 T 11-10-2018 APH_0242 814d9e4cf89b6a2d99b94a897515136a 232 Gene3D G3DSA:3.40.140.10 108 232 2.3E-40 T 11-10-2018 APH_0242 814d9e4cf89b6a2d99b94a897515136a 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site APH_0242 814d9e4cf89b6a2d99b94a897515136a 232 SUPERFAMILY SSF47781 37 91 8.01E-6 T 11-10-2018 IPR010994 RuvA domain 2-like APH_0242 814d9e4cf89b6a2d99b94a897515136a 232 SUPERFAMILY SSF102712 157 198 6.15E-5 T 11-10-2018 APH_0242 814d9e4cf89b6a2d99b94a897515136a 232 Pfam PF04002 RadC-like JAB domain 112 230 3.9E-38 T 11-10-2018 IPR025657 RadC-like JAB domain APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 121 154 550.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 784 815 77.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 1361 1396 4100.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 1585 1615 8.6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 1328 1357 6.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 1169 1203 3500.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 159 188 0.46 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 545 574 59.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 1942 1983 0.022 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 200 234 3900.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 1909 1938 350.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SMART SM00248 47 83 4600.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 Gene3D G3DSA:1.25.40.20 714 1027 4.6E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SUPERFAMILY SSF48403 1131 2000 6.76E-25 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SUPERFAMILY SSF48403 520 886 3.26E-8 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 SUPERFAMILY SSF48403 13 259 2.73E-12 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 Gene3D G3DSA:1.25.40.20 1871 2003 1.0E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0709 180c2e26ff38ddbc0bbe13f9fb1ee058 3373 Gene3D G3DSA:1.25.40.20 2 280 3.7E-15 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0584 2b3767f689fa82d3bb4b4c6ced565983 218 Gene3D G3DSA:3.40.50.150 1 218 2.9E-65 T 11-10-2018 APH_0584 2b3767f689fa82d3bb4b4c6ced565983 218 Pfam PF01596 O-methyltransferase 34 216 7.2E-37 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 APH_0584 2b3767f689fa82d3bb4b4c6ced565983 218 SUPERFAMILY SSF53335 30 216 1.33E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0524 1bf3bb067365d31956e62b9cd7152301 235 SUPERFAMILY SSF64167 3 232 1.44E-48 T 11-10-2018 APH_0524 1bf3bb067365d31956e62b9cd7152301 235 Pfam PF01975 Survival protein SurE 10 167 6.5E-38 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APH_0524 1bf3bb067365d31956e62b9cd7152301 235 Gene3D G3DSA:3.40.1210.10 1 235 1.4E-52 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 APH_1014 5c990ea1ac6dc581b032e9755d7b7615 263 Gene3D G3DSA:3.30.420.40 92 262 4.5E-34 T 11-10-2018 APH_1014 5c990ea1ac6dc581b032e9755d7b7615 263 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 257 26.938 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 APH_1014 5c990ea1ac6dc581b032e9755d7b7615 263 Pfam PF03309 Type III pantothenate kinase 4 209 1.2E-48 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 APH_1014 5c990ea1ac6dc581b032e9755d7b7615 263 Gene3D G3DSA:3.30.420.40 1 88 5.0E-20 T 11-10-2018 APH_1014 5c990ea1ac6dc581b032e9755d7b7615 263 SUPERFAMILY SSF53067 1 123 7.95E-23 T 11-10-2018 APH_1014 5c990ea1ac6dc581b032e9755d7b7615 263 SUPERFAMILY SSF53067 126 254 9.28E-25 T 11-10-2018 APH_1301 d864ef29403f3689dd6b3c3b73f9d52c 183 Pfam PF01195 Peptidyl-tRNA hydrolase 3 170 1.3E-47 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_1301 d864ef29403f3689dd6b3c3b73f9d52c 183 SUPERFAMILY SSF53178 2 179 3.53E-53 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 APH_1301 d864ef29403f3689dd6b3c3b73f9d52c 183 Gene3D G3DSA:3.40.50.1470 1 181 7.9E-54 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 APH_1301 d864ef29403f3689dd6b3c3b73f9d52c 183 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APH_1301 d864ef29403f3689dd6b3c3b73f9d52c 183 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 174 30.588 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APH_1301 d864ef29403f3689dd6b3c3b73f9d52c 183 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 SMART SM00382 104 257 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Gene3D G3DSA:3.40.50.300 53 305 1.8E-105 T 11-10-2018 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Gene3D G3DSA:3.30.50.30 2 47 9.2E-18 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 SMART SM00994 8 47 2.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 405 49.414 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 SMART SM01086 307 398 1.5E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Gene3D G3DSA:1.10.8.60 306 408 3.1E-32 T 11-10-2018 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Pfam PF07724 AAA domain (Cdc48 subfamily) 105 301 1.4E-47 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Pfam PF06689 ClpX C4-type zinc finger 10 46 3.8E-17 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 307 376 8.1E-13 T 11-10-2018 IPR019489 Clp ATPase, C-terminal APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 SUPERFAMILY SSF52540 58 384 6.41E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0969 91f6cf2cd2ed5becc733f7a35fcb0292 415 SUPERFAMILY SSF57716 9 44 2.0E-10 T 11-10-2018 APH_0349 f552dace81ea37152b34024afdbdd41a 449 Pfam PF02881 SRP54-type protein, helical bundle domain 5 80 2.7E-15 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 SUPERFAMILY SSF52540 98 297 7.53E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0349 f552dace81ea37152b34024afdbdd41a 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 SMART SM00963 1 86 2.9E-23 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 SUPERFAMILY SSF47364 1 93 7.59E-21 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 Gene3D G3DSA:1.20.120.140 5 305 7.9E-107 T 11-10-2018 APH_0349 f552dace81ea37152b34024afdbdd41a 449 Gene3D G3DSA:1.10.260.30 311 441 1.5E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 Pfam PF00448 SRP54-type protein, GTPase domain 100 294 5.0E-65 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 Pfam PF02978 Signal peptide binding domain 326 426 4.1E-28 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 SUPERFAMILY SSF47446 297 429 1.07E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 SMART SM00382 99 246 0.0023 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0349 f552dace81ea37152b34024afdbdd41a 449 SMART SM00962 100 295 3.9E-97 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 APH_0349 f552dace81ea37152b34024afdbdd41a 449 Gene3D G3DSA:3.40.50.300 90 284 7.9E-107 T 11-10-2018 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PIRSF PIRSF001369 36 411 5.9E-137 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type APH_1232 7767f3a5b0385983daf884037079b4a3 411 SUPERFAMILY SSF48256 6 410 4.58E-137 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 Pfam PF00285 Citrate synthase, C-terminal domain 45 405 7.8E-119 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 Gene3D G3DSA:1.10.580.10 55 393 1.8E-126 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 APH_1232 7767f3a5b0385983daf884037079b4a3 411 ProSitePatterns PS00480 Citrate synthase signature. 296 308 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 289 309 9.3E-48 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 160 173 9.3E-48 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 212 227 9.3E-48 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 234 262 9.3E-48 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 352 368 9.3E-48 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 PRINTS PR00143 Citrate synthase signature 372 386 9.3E-48 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 APH_1232 7767f3a5b0385983daf884037079b4a3 411 Gene3D G3DSA:2.20.28.60 1 49 2.0E-16 T 11-10-2018 APH_1232 7767f3a5b0385983daf884037079b4a3 411 Gene3D G3DSA:1.10.230.10 261 369 1.8E-126 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain APH_1323 f6217a0353df45c0a1debf9d273de772 205 Pfam PF13717 zinc-ribbon domain 3 36 2.7E-11 T 11-10-2018 IPR011723 Zinc finger/thioredoxin putative APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Gene3D G3DSA:3.40.50.11610 702 902 4.2E-162 T 11-10-2018 APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Gene3D G3DSA:3.40.50.970 140 501 1.3E-140 T 11-10-2018 APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Gene3D G3DSA:1.10.287.1150 67 139 3.9E-6 T 11-10-2018 APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 PIRSF PIRSF000157 2 905 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Gene3D G3DSA:3.40.50.12470 525 780 4.2E-162 T 11-10-2018 APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 SUPERFAMILY SSF52518 116 510 3.91E-80 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 SMART SM00861 566 759 4.1E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Pfam PF02779 Transketolase, pyrimidine binding domain 565 759 2.8E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 SUPERFAMILY SSF52518 562 765 1.25E-50 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Pfam PF00676 Dehydrogenase E1 component 186 496 3.3E-55 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 APH_0863 54abc0b7d7b1740b8f97713e28eeb482 905 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 769 904 2.3E-43 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APH_0471 8f8bb7d2644a3ae659497da2c7fb63bd 185 SUPERFAMILY SSF56219 7 184 1.19E-48 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APH_0471 8f8bb7d2644a3ae659497da2c7fb63bd 185 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 56 176 5.0E-6 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase APH_0471 8f8bb7d2644a3ae659497da2c7fb63bd 185 Gene3D G3DSA:3.60.10.10 2 185 4.4E-44 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APH_1373 8946f2e496b9453967279b058b818cda 241 Pfam PF01553 Acyltransferase 61 186 1.8E-19 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 APH_1373 8946f2e496b9453967279b058b818cda 241 SUPERFAMILY SSF69593 13 238 2.09E-33 T 11-10-2018 APH_1373 8946f2e496b9453967279b058b818cda 241 SMART SM00563 73 189 1.4E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 APH_1025 0be1a67466a8d520da9ce6b34db261a0 134 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 84 134 7.0E-7 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1025 0be1a67466a8d520da9ce6b34db261a0 134 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 64 134 6.4E-21 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1025 0be1a67466a8d520da9ce6b34db261a0 134 SUPERFAMILY SSF54736 64 134 1.53E-16 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APH_1025 0be1a67466a8d520da9ce6b34db261a0 134 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 134 17.828 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1025 0be1a67466a8d520da9ce6b34db261a0 134 SUPERFAMILY SSF48300 5 65 9.68E-8 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1025 0be1a67466a8d520da9ce6b34db261a0 134 Gene3D G3DSA:3.30.1390.10 63 134 1.7E-20 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APH_0732 2b351a04629bad722476e0b19e7468f1 395 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 125 395 3.5E-124 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0732 2b351a04629bad722476e0b19e7468f1 395 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 395 48.716 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0732 2b351a04629bad722476e0b19e7468f1 395 Gene3D G3DSA:1.10.645.20 9 395 9.4E-179 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0732 2b351a04629bad722476e0b19e7468f1 395 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 48 59 - T 11-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0732 2b351a04629bad722476e0b19e7468f1 395 SUPERFAMILY SSF56762 21 395 1.27E-140 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0923 69c8b6180de001e71e502ebd3edf6773 157 Pfam PF02600 Disulfide bond formation protein DsbB 6 146 7.4E-25 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APH_0923 69c8b6180de001e71e502ebd3edf6773 157 PIRSF PIRSF033913 1 155 5.7E-28 T 11-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like APH_0923 69c8b6180de001e71e502ebd3edf6773 157 SUPERFAMILY SSF158442 7 147 6.41E-28 T 11-10-2018 IPR023380 DsbB-like superfamily APH_0923 69c8b6180de001e71e502ebd3edf6773 157 Gene3D G3DSA:1.20.1550.10 2 156 3.7E-14 T 11-10-2018 IPR023380 DsbB-like superfamily APH_0292 7511f68ff27bf1236f0a226ba813554c 177 PIRSF PIRSF002161 1 177 2.8E-58 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0292 7511f68ff27bf1236f0a226ba813554c 177 Pfam PF00673 ribosomal L5P family C-terminus 82 175 5.3E-37 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0292 7511f68ff27bf1236f0a226ba813554c 177 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 177 36.888 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0292 7511f68ff27bf1236f0a226ba813554c 177 Pfam PF00281 Ribosomal protein L5 22 78 1.3E-23 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0292 7511f68ff27bf1236f0a226ba813554c 177 Gene3D G3DSA:3.30.1440.10 2 177 4.5E-68 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0292 7511f68ff27bf1236f0a226ba813554c 177 SUPERFAMILY SSF55282 7 176 1.77E-66 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_1371 bfb85188a1a50c826155b3381add3860 290 Gene3D G3DSA:3.40.470.10 82 284 9.3E-60 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APH_1371 bfb85188a1a50c826155b3381add3860 290 SUPERFAMILY SSF52141 95 282 2.71E-56 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APH_1371 bfb85188a1a50c826155b3381add3860 290 SMART SM00986 122 275 1.2E-35 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APH_1371 bfb85188a1a50c826155b3381add3860 290 SMART SM00987 122 275 1.2E-35 T 11-10-2018 APH_1371 bfb85188a1a50c826155b3381add3860 290 Pfam PF03167 Uracil DNA glycosylase superfamily 123 275 2.2E-41 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 APH_0243 6d2fc8742353e1e8dade35f8620cac73 208 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 76 128 9.0E-16 T 11-10-2018 APH_0243 6d2fc8742353e1e8dade35f8620cac73 208 Gene3D G3DSA:3.30.930.10 3 207 1.2E-62 T 11-10-2018 APH_0243 6d2fc8742353e1e8dade35f8620cac73 208 SUPERFAMILY SSF55681 7 207 5.47E-60 T 11-10-2018 APH_0243 6d2fc8742353e1e8dade35f8620cac73 208 PIRSF PIRSF016262 2 208 2.3E-56 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APH_0243 6d2fc8742353e1e8dade35f8620cac73 208 Pfam PF03099 Biotin/lipoate A/B protein ligase family 64 163 6.9E-9 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 APH_0243 6d2fc8742353e1e8dade35f8620cac73 208 Hamap MF_00013 Octanoyltransferase [lipB]. 3 208 33.001 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 APH_1391 2c57474f4bda777ec67ca746fc330c3d 266 Pfam PF01617 Surface antigen 152 264 8.1E-38 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1391 2c57474f4bda777ec67ca746fc330c3d 266 SUPERFAMILY SSF56925 137 264 4.71E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1391 2c57474f4bda777ec67ca746fc330c3d 266 Gene3D G3DSA:2.40.160.20 112 264 2.8E-8 T 11-10-2018 APH_0435 a2de0a9d26f6e6f89b2a1a4e7024fbca 201 Gene3D G3DSA:1.20.120.1200 3 165 7.8E-35 T 11-10-2018 APH_0435 a2de0a9d26f6e6f89b2a1a4e7024fbca 201 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 162 5.5E-30 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0982 c4c45641562edca960de6823df2fe07a 286 Gene3D G3DSA:3.40.50.1980 181 286 2.7E-22 T 11-10-2018 APH_0982 c4c45641562edca960de6823df2fe07a 286 SUPERFAMILY SSF53807 23 285 3.14E-55 T 11-10-2018 APH_0982 c4c45641562edca960de6823df2fe07a 286 Gene3D G3DSA:3.40.50.1980 19 180 1.1E-33 T 11-10-2018 APH_0982 c4c45641562edca960de6823df2fe07a 286 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 284 7.9E-46 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APH_0980 1bd3d491adcec46f29ca3aa3b3bf50b2 220 SUPERFAMILY SSF56925 102 217 2.56E-11 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0980 1bd3d491adcec46f29ca3aa3b3bf50b2 220 Pfam PF01617 Surface antigen 63 220 8.9E-38 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0980 1bd3d491adcec46f29ca3aa3b3bf50b2 220 Gene3D G3DSA:2.40.160.20 49 181 2.8E-8 T 11-10-2018 APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 308 3.2E-39 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 Pfam PF00698 Acyl transferase domain 4 293 4.5E-33 T 11-10-2018 IPR014043 Acyl transferase APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 SUPERFAMILY SSF55048 132 200 7.32E-13 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 SUPERFAMILY SSF52151 3 310 3.14E-71 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 Gene3D G3DSA:3.30.70.250 130 202 1.2E-92 T 11-10-2018 APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 Gene3D G3DSA:3.40.366.10 5 289 1.2E-92 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 APH_0092 98fb40a74ddad94da3c34a3126cdf006 319 PIRSF PIRSF000446 1 313 5.5E-81 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APH_0120 f9c22399430ce29a491e565b09946998 420 Gene3D G3DSA:3.40.50.800 322 416 5.1E-18 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily APH_0120 f9c22399430ce29a491e565b09946998 420 PIRSF PIRSF001549 4 416 7.4E-109 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 APH_0120 f9c22399430ce29a491e565b09946998 420 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 414 30.014 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 APH_0120 f9c22399430ce29a491e565b09946998 420 Pfam PF13393 Histidyl-tRNA synthetase 11 311 1.4E-43 T 11-10-2018 APH_0120 f9c22399430ce29a491e565b09946998 420 SUPERFAMILY SSF52954 325 415 6.38E-18 T 11-10-2018 APH_0120 f9c22399430ce29a491e565b09946998 420 Pfam PF03129 Anticodon binding domain 325 414 4.7E-9 T 11-10-2018 IPR004154 Anticodon-binding APH_0120 f9c22399430ce29a491e565b09946998 420 Gene3D G3DSA:3.30.930.10 5 321 1.9E-104 T 11-10-2018 APH_0120 f9c22399430ce29a491e565b09946998 420 SUPERFAMILY SSF55681 6 315 1.49E-88 T 11-10-2018 APH_0662 6f18f8a6b7941c456f6954edbffbd237 442 SUPERFAMILY SSF56925 61 442 6.8E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0662 6f18f8a6b7941c456f6954edbffbd237 442 Pfam PF01617 Surface antigen 61 442 7.7E-75 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0662 6f18f8a6b7941c456f6954edbffbd237 442 Gene3D G3DSA:2.40.160.20 267 406 2.3E-9 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 Pfam PF00361 Proton-conducting membrane transporter 128 420 1.3E-80 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 2.3E-62 T 11-10-2018 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 418 440 4.5E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 4.5E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 4.5E-8 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APH_0437 e8fbbe71092e3b99af50f14b30c8b60a 625 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 116 1.2E-22 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1134 947aa0c7a2dd2d1797d382fafb0b3713 120 Pfam PF04956 TrbC/VIRB2 family 3 100 1.7E-17 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 SUPERFAMILY SSF56059 102 319 3.37E-55 T 11-10-2018 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 SMART SM01209 101 293 9.1E-112 T 11-10-2018 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 SUPERFAMILY SSF51246 326 417 6.28E-25 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.4E-69 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.30.470.20 189 326 8.1E-53 T 11-10-2018 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 SMART SM01210 327 417 1.8E-38 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 SUPERFAMILY SSF52440 1 100 6.62E-30 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.40.50.20 2 93 3.2E-32 T 11-10-2018 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.90.600.10 327 418 6.6E-31 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.4E-30 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 36.438 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 417 1.5E-25 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 Gene3D G3DSA:3.30.1490.20 119 188 7.3E-25 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 APH_1088 c8c647006e8a0b505a0a333042e1ff4f 418 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 APH_0206 5aa4b0d59708d6b28a9fffe8e10078a2 295 Pfam PF00990 Diguanylate cyclase, GGDEF domain 199 288 1.2E-5 T 11-10-2018 IPR000160 GGDEF domain APH_0206 5aa4b0d59708d6b28a9fffe8e10078a2 295 SUPERFAMILY SSF55073 199 289 6.75E-8 T 11-10-2018 IPR029787 Nucleotide cyclase APH_0206 5aa4b0d59708d6b28a9fffe8e10078a2 295 Gene3D G3DSA:3.30.70.270 186 294 2.9E-9 T 11-10-2018 APH_0448 eeea4865200d36866eebda2d8d8c4dad 75 Gene3D G3DSA:2.40.30.10 5 60 2.6E-12 T 11-10-2018 APH_0448 eeea4865200d36866eebda2d8d8c4dad 75 SUPERFAMILY SSF50447 8 53 2.83E-8 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_1013 2a0052b706ba570585038b74590d1fbf 350 Pfam PF01180 Dihydroorotate dehydrogenase 47 333 5.5E-83 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APH_1013 2a0052b706ba570585038b74590d1fbf 350 Gene3D G3DSA:3.20.20.70 3 350 1.7E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_1013 2a0052b706ba570585038b74590d1fbf 350 PIRSF PIRSF000164 16 350 3.2E-89 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 APH_1013 2a0052b706ba570585038b74590d1fbf 350 SUPERFAMILY SSF51395 5 349 3.05E-86 T 11-10-2018 APH_1013 2a0052b706ba570585038b74590d1fbf 350 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 285 305 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 APH_1013 2a0052b706ba570585038b74590d1fbf 350 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 77 96 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 SUPERFAMILY SSF48557 4 460 4.12E-153 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 Pfam PF10415 Fumarase C C-terminus 407 459 1.8E-21 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 Gene3D G3DSA:1.10.40.30 406 462 9.7E-24 T 11-10-2018 APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 Gene3D G3DSA:1.10.275.10 4 137 3.9E-57 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 Gene3D G3DSA:1.20.200.10 138 405 5.3E-117 T 11-10-2018 APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 Pfam PF00206 Lyase 12 341 2.6E-109 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 2.6E-33 T 11-10-2018 IPR000362 Fumarate lyase family APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 2.6E-33 T 11-10-2018 IPR000362 Fumarate lyase family APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 2.6E-33 T 11-10-2018 IPR000362 Fumarate lyase family APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.6E-33 T 11-10-2018 IPR000362 Fumarate lyase family APH_0247 3b4ac91727f9e053e0680c5d429da35c 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 87.77 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 APH_1223 83adbf0d747325ad878702af3ad81a31 84 Pfam PF00154 recA bacterial DNA recombination protein 10 84 2.6E-31 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APH_1223 83adbf0d747325ad878702af3ad81a31 84 Gene3D G3DSA:3.40.50.300 29 84 1.5E-16 T 11-10-2018 APH_1223 83adbf0d747325ad878702af3ad81a31 84 SUPERFAMILY SSF52540 8 83 2.83E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0022 baf48dbe04fd234467e56c3ddd6b4b54 156 Pfam PF04586 Caudovirus prohead serine protease 9 145 1.2E-35 T 11-10-2018 IPR006433 Prohead protease APH_0022 baf48dbe04fd234467e56c3ddd6b4b54 156 SUPERFAMILY SSF50789 15 132 8.83E-8 T 11-10-2018 APH_1165 fd15b90cfdb2332d75ae0d5b6315e846 585 Pfam PF01368 DHH family 95 199 1.9E-8 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 APH_1165 fd15b90cfdb2332d75ae0d5b6315e846 585 Gene3D G3DSA:3.90.1640.30 70 342 2.1E-84 T 11-10-2018 APH_1165 fd15b90cfdb2332d75ae0d5b6315e846 585 SUPERFAMILY SSF64182 69 465 9.81E-109 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily APH_1165 fd15b90cfdb2332d75ae0d5b6315e846 585 Gene3D G3DSA:3.10.310.30 343 466 7.4E-26 T 11-10-2018 APH_1165 fd15b90cfdb2332d75ae0d5b6315e846 585 Pfam PF02272 DHHA1 domain 340 460 6.4E-16 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 APH_0313 e4eb75af583ed0fe17b11f27e760e914 252 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0313 e4eb75af583ed0fe17b11f27e760e914 252 SMART SM00382 30 225 2.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0313 e4eb75af583ed0fe17b11f27e760e914 252 SUPERFAMILY SSF52540 8 240 3.15E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0313 e4eb75af583ed0fe17b11f27e760e914 252 Gene3D G3DSA:3.40.50.300 6 252 3.1E-64 T 11-10-2018 APH_0313 e4eb75af583ed0fe17b11f27e760e914 252 Pfam PF00005 ABC transporter 23 177 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_1375 db84e528557487d1e088a6e7215e9f78 91 Pfam PF01327 Polypeptide deformylase 6 75 3.4E-26 T 11-10-2018 IPR023635 Peptide deformylase APH_1375 db84e528557487d1e088a6e7215e9f78 91 PRINTS PR01576 Peptide deformylase signature 24 42 2.0E-18 T 11-10-2018 IPR023635 Peptide deformylase APH_1375 db84e528557487d1e088a6e7215e9f78 91 PRINTS PR01576 Peptide deformylase signature 12 23 2.0E-18 T 11-10-2018 IPR023635 Peptide deformylase APH_1375 db84e528557487d1e088a6e7215e9f78 91 PRINTS PR01576 Peptide deformylase signature 43 72 2.0E-18 T 11-10-2018 IPR023635 Peptide deformylase APH_1375 db84e528557487d1e088a6e7215e9f78 91 Gene3D G3DSA:3.90.45.10 1 89 1.6E-29 T 11-10-2018 IPR036821 Peptide deformylase superfamily APH_1375 db84e528557487d1e088a6e7215e9f78 91 SUPERFAMILY SSF56420 4 87 1.96E-29 T 11-10-2018 IPR036821 Peptide deformylase superfamily APH_1218 6340bb13dd681fff6876088b2d520bcd 183 Gene3D G3DSA:1.10.260.40 22 96 2.3E-18 T 11-10-2018 APH_1218 6340bb13dd681fff6876088b2d520bcd 183 SMART SM00530 33 88 5.5E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APH_1218 6340bb13dd681fff6876088b2d520bcd 183 Pfam PF01381 Helix-turn-helix 34 88 4.9E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APH_1218 6340bb13dd681fff6876088b2d520bcd 183 SUPERFAMILY SSF47413 21 105 4.61E-26 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 APH_0768 340e8e673c77579d44c13193b984b185 93 SMART SM01387 8 89 1.6E-35 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0768 340e8e673c77579d44c13193b984b185 93 Pfam PF00312 Ribosomal protein S15 8 89 2.9E-28 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0768 340e8e673c77579d44c13193b984b185 93 SUPERFAMILY SSF47060 3 90 4.71E-28 T 11-10-2018 IPR009068 S15/NS1, RNA-binding APH_0768 340e8e673c77579d44c13193b984b185 93 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 89 8.0E-36 T 11-10-2018 APH_0768 340e8e673c77579d44c13193b984b185 93 Gene3D G3DSA:1.10.287.10 1 90 1.1E-27 T 11-10-2018 APH_0768 340e8e673c77579d44c13193b984b185 93 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 90 19.402 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0019 ffd68549b3cbb842b8d6a874891a7541 285 Gene3D G3DSA:1.10.287.70 13 81 5.6E-20 T 11-10-2018 APH_0019 ffd68549b3cbb842b8d6a874891a7541 285 Gene3D G3DSA:1.20.120.80 84 284 2.5E-62 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0019 ffd68549b3cbb842b8d6a874891a7541 285 Pfam PF00510 Cytochrome c oxidase subunit III 17 284 1.9E-77 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0019 ffd68549b3cbb842b8d6a874891a7541 285 SUPERFAMILY SSF81452 13 283 8.27E-81 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0123 5bc02e2dc4485e730d2cd9ddec800650 328 Hamap MF_01665 Heme A synthase [ctaA]. 3 328 23.865 T 11-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 APH_0123 5bc02e2dc4485e730d2cd9ddec800650 328 Pfam PF02628 Cytochrome oxidase assembly protein 7 317 2.0E-98 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 SUPERFAMILY SSF81336 83 236 3.01E-42 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 PRINTS PR00123 ATP synthase A subunit signature 168 190 3.6E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 PRINTS PR00123 ATP synthase A subunit signature 222 237 3.6E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 PRINTS PR00123 ATP synthase A subunit signature 87 103 3.6E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 PRINTS PR00123 ATP synthase A subunit signature 148 163 3.6E-29 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 Hamap MF_01393 ATP synthase subunit a [atpB]. 5 242 14.478 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 Pfam PF00119 ATP synthase A chain 30 236 9.8E-51 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 ProSitePatterns PS00449 ATP synthase a subunit signature. 171 180 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1192 9ef5e6e044642e3be53ee0eb7ecc69fb 242 Gene3D G3DSA:1.20.120.220 81 242 4.7E-34 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 239 254 1.6E-16 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 307 323 1.6E-16 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 384 403 1.6E-16 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-16 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 SUPERFAMILY SSF109604 331 475 4.27E-12 T 11-10-2018 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 Pfam PF05746 DALR anticodon binding domain 581 682 6.6E-5 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 552 2.2E-143 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0014 e87140e2dc9a44ab30c9736274efdd5f 701 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 697 18.247 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APH_0986 c6b4db48bee264fed20c1784e64b4c51 342 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0986 c6b4db48bee264fed20c1784e64b4c51 342 SMART SM00382 29 215 1.5E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0986 c6b4db48bee264fed20c1784e64b4c51 342 SUPERFAMILY SSF50331 242 340 3.74E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal APH_0986 c6b4db48bee264fed20c1784e64b4c51 342 Gene3D G3DSA:3.40.50.300 3 253 5.2E-67 T 11-10-2018 APH_0986 c6b4db48bee264fed20c1784e64b4c51 342 Pfam PF00005 ABC transporter 25 166 1.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0986 c6b4db48bee264fed20c1784e64b4c51 342 SUPERFAMILY SSF52540 4 246 2.34E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0428 59ce327d401079b73ede79c02ccb699c 411 Pfam PF02646 RmuC family 103 402 1.7E-92 T 11-10-2018 IPR003798 DNA recombination RmuC APH_0478 e692068639b00428ce0081734d065c31 54 Pfam PF02637 GatB domain 1 52 6.9E-19 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 APH_0478 e692068639b00428ce0081734d065c31 54 Gene3D G3DSA:1.10.10.410 1 54 3.8E-23 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APH_0478 e692068639b00428ce0081734d065c31 54 SUPERFAMILY SSF89095 12 53 1.1E-10 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 APH_0462 e692068639b00428ce0081734d065c31 54 Pfam PF02637 GatB domain 1 52 6.9E-19 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 APH_0462 e692068639b00428ce0081734d065c31 54 Gene3D G3DSA:1.10.10.410 1 54 3.8E-23 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APH_0462 e692068639b00428ce0081734d065c31 54 SUPERFAMILY SSF89095 12 53 1.1E-10 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 APH_0098 530299b0ae8e7bb7992cd3dcbe45a45d 227 Gene3D G3DSA:1.10.40.80 109 171 3.9E-44 T 11-10-2018 APH_0098 530299b0ae8e7bb7992cd3dcbe45a45d 227 Pfam PF13462 Thioredoxin 52 218 9.3E-46 T 11-10-2018 IPR012336 Thioredoxin-like fold APH_0098 530299b0ae8e7bb7992cd3dcbe45a45d 227 Gene3D G3DSA:3.40.30.10 54 205 3.9E-44 T 11-10-2018 APH_0098 530299b0ae8e7bb7992cd3dcbe45a45d 227 SUPERFAMILY SSF52833 47 218 5.47E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1029 374ae2c166b746595183b54509b0350e 186 SUPERFAMILY SSF50104 130 184 1.35E-12 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily APH_1029 374ae2c166b746595183b54509b0350e 186 SUPERFAMILY SSF82679 8 117 7.72E-28 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APH_1029 374ae2c166b746595183b54509b0350e 186 Gene3D G3DSA:3.30.70.940 4 121 9.8E-28 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APH_1029 374ae2c166b746595183b54509b0350e 186 Gene3D G3DSA:2.30.30.30 129 184 7.4E-16 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 APH_1029 374ae2c166b746595183b54509b0350e 186 SMART SM00738 7 116 4.8E-24 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APH_1029 374ae2c166b746595183b54509b0350e 186 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 4.0E-8 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_1029 374ae2c166b746595183b54509b0350e 186 PRINTS PR00338 Transcription termination factor NUSG signature 142 157 4.0E-8 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_1029 374ae2c166b746595183b54509b0350e 186 PRINTS PR00338 Transcription termination factor NUSG signature 160 176 4.0E-8 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_1029 374ae2c166b746595183b54509b0350e 186 Pfam PF02357 Transcription termination factor nusG 9 112 8.8E-17 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 APH_1029 374ae2c166b746595183b54509b0350e 186 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 184 20.285 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 APH_1036 637d7247a58ddca15ff9eefab1a5f177 543 Gene3D G3DSA:3.40.50.10710 206 355 2.4E-154 T 11-10-2018 APH_1036 637d7247a58ddca15ff9eefab1a5f177 543 SMART SM00849 20 194 1.4E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase APH_1036 637d7247a58ddca15ff9eefab1a5f177 543 SUPERFAMILY SSF56281 10 420 2.1E-80 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APH_1036 637d7247a58ddca15ff9eefab1a5f177 543 Gene3D G3DSA:3.60.15.10 11 425 2.4E-154 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like APH_1036 637d7247a58ddca15ff9eefab1a5f177 543 Pfam PF00753 Metallo-beta-lactamase superfamily 22 162 2.0E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase APH_1036 637d7247a58ddca15ff9eefab1a5f177 543 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 351 407 1.9E-8 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain APH_1087 727809e2c607029af50df7c96ac2ba55 233 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 2 232 24.919 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD APH_1087 727809e2c607029af50df7c96ac2ba55 233 SUPERFAMILY SSF48452 33 221 1.21E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_1087 727809e2c607029af50df7c96ac2ba55 233 Pfam PF13525 Outer membrane lipoprotein 34 221 3.6E-41 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like APH_1087 727809e2c607029af50df7c96ac2ba55 233 Gene3D G3DSA:1.25.40.10 33 231 1.6E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_1297 5568708c6f1b697bc9c92d3102410812 177 Pfam PF02441 Flavoprotein 1 172 1.3E-47 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 APH_1297 5568708c6f1b697bc9c92d3102410812 177 SUPERFAMILY SSF52507 1 174 4.58E-56 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 APH_1297 5568708c6f1b697bc9c92d3102410812 177 Gene3D G3DSA:3.40.50.1950 1 177 3.1E-57 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 APH_1238 d2910700f932abdbbb52595ddfc11fd9 372 Gene3D G3DSA:2.40.160.20 129 333 1.5E-9 T 11-10-2018 APH_1238 d2910700f932abdbbb52595ddfc11fd9 372 SUPERFAMILY SSF56925 45 372 1.23E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1238 d2910700f932abdbbb52595ddfc11fd9 372 Pfam PF01617 Surface antigen 5 372 2.5E-74 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0538 0a9d481fd4b24f9abdf43973e25efde3 282 Gene3D G3DSA:1.10.940.10 16 157 1.0E-23 T 11-10-2018 IPR035926 NusB-like superfamily APH_0538 0a9d481fd4b24f9abdf43973e25efde3 282 Pfam PF01029 NusB family 21 150 1.9E-26 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APH_0538 0a9d481fd4b24f9abdf43973e25efde3 282 SUPERFAMILY SSF48013 18 150 2.49E-24 T 11-10-2018 IPR035926 NusB-like superfamily APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 SUPERFAMILY SSF50104 3 102 1.02E-24 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 Gene3D G3DSA:2.30.30.30 1 104 3.3E-28 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 15.695 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 102 9.1E-18 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 SMART SM00739 3 30 0.0021 T 11-10-2018 IPR005824 KOW APH_0291 ac0a94f4c7a1698eb411f4b20baf5dac 104 Pfam PF00467 KOW motif 7 36 2.2E-6 T 11-10-2018 IPR005824 KOW APH_0586 8126a200feb99f8770c743883b1c5bd6 168 Pfam PF13667 ThiC-associated domain 9 77 3.5E-19 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APH_1219 0803c04b280dd72be3957794219a4be4 306 Pfam PF01617 Surface antigen 39 305 5.3E-33 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1219 0803c04b280dd72be3957794219a4be4 306 SUPERFAMILY SSF56925 105 263 1.23E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1351 1507e6a8e47c5bac7baf0423e6fdfc11 277 SUPERFAMILY SSF56925 188 267 2.01E-12 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1351 1507e6a8e47c5bac7baf0423e6fdfc11 277 Pfam PF01617 Surface antigen 161 274 1.0E-40 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1351 1507e6a8e47c5bac7baf0423e6fdfc11 277 Gene3D G3DSA:2.40.160.20 126 271 1.2E-9 T 11-10-2018 APH_0663 6fcf1749e87bc60c957733827ea04d37 429 SUPERFAMILY SSF56925 43 426 3.77E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0663 6fcf1749e87bc60c957733827ea04d37 429 Gene3D G3DSA:2.40.160.20 207 391 1.6E-9 T 11-10-2018 APH_0663 6fcf1749e87bc60c957733827ea04d37 429 Pfam PF01617 Surface antigen 43 429 2.6E-64 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0072 471bad029d3742b325fd8b44f774e962 450 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 444 25.137 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0072 471bad029d3742b325fd8b44f774e962 450 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0072 471bad029d3742b325fd8b44f774e962 450 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 272 4.9E-74 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 APH_0072 471bad029d3742b325fd8b44f774e962 450 SUPERFAMILY SSF52374 2 296 7.24E-86 T 11-10-2018 APH_0072 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 1.5E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0072 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 1.5E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0072 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.5E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0072 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 1.5E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0072 471bad029d3742b325fd8b44f774e962 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.5E-22 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 APH_0072 471bad029d3742b325fd8b44f774e962 450 SUPERFAMILY SSF48163 281 441 6.8E-24 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0072 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:1.10.10.350 356 444 4.6E-12 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 APH_0072 471bad029d3742b325fd8b44f774e962 450 Gene3D G3DSA:3.40.50.620 1 314 5.0E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0933 aae25752b1db6ee9cb3645c12c5cbb29 344 Gene3D G3DSA:1.10.10.10 266 339 1.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily APH_0933 aae25752b1db6ee9cb3645c12c5cbb29 344 Pfam PF02481 DNA recombination-mediator protein A 43 250 8.2E-71 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 APH_0933 aae25752b1db6ee9cb3645c12c5cbb29 344 SUPERFAMILY SSF102405 54 259 1.51E-35 T 11-10-2018 APH_0933 aae25752b1db6ee9cb3645c12c5cbb29 344 Gene3D G3DSA:3.40.50.450 1 260 3.2E-91 T 11-10-2018 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 Gene3D G3DSA:3.40.30.10 1 106 2.2E-31 T 11-10-2018 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PIRSF PIRSF000077 1 105 3.2E-34 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 Pfam PF00085 Thioredoxin 4 102 5.2E-27 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 SUPERFAMILY SSF52833 3 107 1.25E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PRINTS PR00421 Thioredoxin family signature 71 82 1.1E-8 T 11-10-2018 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PRINTS PR00421 Thioredoxin family signature 31 40 1.1E-8 T 11-10-2018 APH_0080 2646ab8a1bbd18e0b90dcd57cda9f72a 110 PRINTS PR00421 Thioredoxin family signature 23 31 1.1E-8 T 11-10-2018 APH_1330 31d57d787836f9e087e9e61639748704 220 Pfam PF01617 Surface antigen 139 211 6.6E-18 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0347 29a4fc6e5a6fe43e31114d8efe0e724e 152 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 15 143 3.6E-16 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 APH_0347 29a4fc6e5a6fe43e31114d8efe0e724e 152 SUPERFAMILY SSF55961 8 150 7.41E-24 T 11-10-2018 APH_0347 29a4fc6e5a6fe43e31114d8efe0e724e 152 Gene3D G3DSA:3.30.530.20 6 151 1.4E-31 T 11-10-2018 IPR023393 START-like domain superfamily APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.1E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF00679 Elongation factor G C-terminus 400 483 2.3E-21 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF54980 402 516 1.1E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:2.40.50.250 486 602 2.0E-126 T 11-10-2018 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.40.50.300 5 200 1.8E-64 T 11-10-2018 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF50447 154 302 2.21E-26 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF03144 Elongation factor Tu domain 2 222 292 1.2E-7 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF52540 5 209 8.43E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.30.70.240 393 485 2.0E-126 T 11-10-2018 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 SMART SM00838 399 487 0.0018 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:2.40.30.10 202 302 3.6E-26 T 11-10-2018 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.30.70.870 310 593 2.0E-126 T 11-10-2018 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF00009 Elongation factor Tu GTP binding domain 7 197 1.9E-55 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APH_0451 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF54980 307 391 2.73E-10 T 11-10-2018 IPR035647 EF-G domain III/V-like APH_0636 f47bc432a0982a1675dc2cbeb60f5e95 129 Pfam PF06199 Phage tail tube protein 34 124 3.0E-6 T 11-10-2018 IPR011855 Phage major tail protein TP901-1 APH_0256 402120104684e808e3f4443b66da7a09 995 Pfam PF00005 ABC transporter 347 494 4.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APH_0256 402120104684e808e3f4443b66da7a09 995 Pfam PF00664 ABC transporter transmembrane region 22 279 2.5E-10 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 APH_0256 402120104684e808e3f4443b66da7a09 995 SUPERFAMILY SSF90123 5 314 1.28E-40 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 APH_0256 402120104684e808e3f4443b66da7a09 995 Gene3D G3DSA:3.40.50.300 324 563 8.0E-66 T 11-10-2018 APH_0256 402120104684e808e3f4443b66da7a09 995 SUPERFAMILY SSF52540 318 555 1.52E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0256 402120104684e808e3f4443b66da7a09 995 SMART SM00382 355 543 1.0E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0256 402120104684e808e3f4443b66da7a09 995 Gene3D G3DSA:1.20.1560.10 7 316 1.0E-36 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 APH_0256 402120104684e808e3f4443b66da7a09 995 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APH_0052 5033e1dfaf0644bd7eb1f29f19f072b0 71 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 26.138 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 APH_0052 5033e1dfaf0644bd7eb1f29f19f072b0 71 Pfam PF03966 Trm112p-like protein 3 42 1.8E-7 T 11-10-2018 IPR005651 Trm112-like APH_0052 5033e1dfaf0644bd7eb1f29f19f072b0 71 Gene3D G3DSA:2.20.25.10 9 67 6.9E-24 T 11-10-2018 APH_0052 5033e1dfaf0644bd7eb1f29f19f072b0 71 SUPERFAMILY SSF158997 2 56 1.05E-19 T 11-10-2018 APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 Gene3D G3DSA:1.10.8.60 6 236 2.6E-87 T 11-10-2018 APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 229 362 1.3E-21 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 SUPERFAMILY SSF48019 241 358 4.76E-9 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 Pfam PF13177 DNA polymerase III, delta subunit 18 174 3.3E-33 T 11-10-2018 APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 SUPERFAMILY SSF52540 32 224 7.98E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 SMART SM00382 34 176 2.6E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_1348 a423b96eb7f2da35e5a1b4afa62fc347 456 Gene3D G3DSA:3.40.50.300 10 174 2.6E-87 T 11-10-2018 APH_1177 9ff4d5b1bac4207ab27e1f585d3b682e 230 Pfam PF01617 Surface antigen 139 222 1.3E-19 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1344 31ff47e92ed2a45d8964bdeaa125df56 144 SUPERFAMILY SSF52540 18 116 8.23E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1344 31ff47e92ed2a45d8964bdeaa125df56 144 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 14 127 3.0E-28 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APH_1344 31ff47e92ed2a45d8964bdeaa125df56 144 Gene3D G3DSA:3.40.50.300 9 143 1.2E-30 T 11-10-2018 APH_0878 9b300c68642c47e2e21de7af9f10dd7f 419 SUPERFAMILY SSF103473 19 417 2.09E-20 T 11-10-2018 IPR036259 MFS transporter superfamily APH_0878 9b300c68642c47e2e21de7af9f10dd7f 419 Gene3D G3DSA:1.20.1250.20 32 219 1.5E-5 T 11-10-2018 APH_0878 9b300c68642c47e2e21de7af9f10dd7f 419 Gene3D G3DSA:1.20.1250.20 220 417 9.7E-6 T 11-10-2018 APH_0463 168f822d0727fa1e53ae326404a55e50 72 SUPERFAMILY SSF75620 25 60 4.19E-11 T 11-10-2018 APH_0463 168f822d0727fa1e53ae326404a55e50 72 Gene3D G3DSA:3.30.70.1660 8 63 5.7E-8 T 11-10-2018 APH_0961 724bc9947545c170ff81dfe6e3b896a4 280 Pfam PF03618 Kinase/pyrophosphorylase 9 264 5.5E-85 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APH_0961 724bc9947545c170ff81dfe6e3b896a4 280 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 7 269 52.15 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein APH_0430 a048ad7b9b1b619f14c0b86ca4daddfb 207 SUPERFAMILY SSF54427 69 204 2.41E-6 T 11-10-2018 IPR032710 NTF2-like domain superfamily APH_0430 a048ad7b9b1b619f14c0b86ca4daddfb 207 Gene3D G3DSA:3.10.450.230 67 206 1.1E-18 T 11-10-2018 APH_1277 19cc5eefc94f20662b373d3ca82130c8 235 SUPERFAMILY SSF53448 5 231 2.93E-43 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases APH_1277 19cc5eefc94f20662b373d3ca82130c8 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 231 4.3E-42 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 APH_1277 19cc5eefc94f20662b373d3ca82130c8 235 Gene3D G3DSA:3.90.550.10 3 233 1.7E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases APH_0207 77b848bb9dedcf7711e8ec31f51f5a08 127 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 3.8E-26 T 11-10-2018 APH_0207 77b848bb9dedcf7711e8ec31f51f5a08 127 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 5 105 22.035 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APH_0207 77b848bb9dedcf7711e8ec31f51f5a08 127 SUPERFAMILY SSF81301 5 106 6.05E-32 T 11-10-2018 APH_0207 77b848bb9dedcf7711e8ec31f51f5a08 127 Gene3D G3DSA:3.30.460.10 3 116 5.3E-34 T 11-10-2018 APH_0660 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 Pfam PF00155 Aminotransferase class I and II 30 386 2.1E-70 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APH_0660 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 SUPERFAMILY SSF53383 2 390 1.6E-107 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase APH_0660 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 Gene3D G3DSA:3.90.1150.10 23 385 6.1E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 APH_0660 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 Gene3D G3DSA:3.40.640.10 61 281 6.1E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 APH_0660 fb8c7fb3e2988d9c4cb51a0fbb9f0835 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 APH_0174 113eeb324553c7c4277f9cdb8897b3a8 326 SUPERFAMILY SSF56925 6 315 2.82E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0174 113eeb324553c7c4277f9cdb8897b3a8 326 Pfam PF01617 Surface antigen 6 320 1.2E-51 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 Pfam PF00366 Ribosomal protein S17 8 74 5.4E-22 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 6.0E-26 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 SUPERFAMILY SSF50249 5 75 1.03E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 7.3E-7 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 7.3E-7 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 7.3E-7 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 76 18.695 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0289 e8fcb63432d5aa301d8b40421cdf1eeb 76 Gene3D G3DSA:2.40.50.140 1 76 5.9E-23 T 11-10-2018 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Pfam PF00472 RF-1 domain 185 218 4.0E-13 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Gene3D G3DSA:3.30.70.1660 85 181 9.6E-54 T 11-10-2018 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 SMART SM00937 37 151 5.3E-43 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 201 217 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 SUPERFAMILY SSF75620 3 218 5.49E-70 T 11-10-2018 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Gene3D G3DSA:3.30.160.20 182 218 9.6E-54 T 11-10-2018 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Pfam PF03462 PCRF domain 3 176 2.7E-48 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 APH_0468 2fd3cfa6f230a9ad2de9c811771d8bc2 226 Gene3D G3DSA:1.20.58.410 3 69 1.3E-8 T 11-10-2018 APH_1265 d51950d74b9c627b9720c0f3fb1788f1 171 Gene3D G3DSA:3.90.950.20 2 170 2.0E-50 T 11-10-2018 IPR036653 CinA-like, C-terminal APH_1265 d51950d74b9c627b9720c0f3fb1788f1 171 Pfam PF02464 Competence-damaged protein 11 165 5.9E-45 T 11-10-2018 IPR008136 CinA, C-terminal APH_1265 d51950d74b9c627b9720c0f3fb1788f1 171 SUPERFAMILY SSF142433 4 165 2.88E-43 T 11-10-2018 IPR036653 CinA-like, C-terminal APH_0675 cf28c4219d95b6114156b63351af45db 130 Pfam PF01592 NifU-like N terminal domain 3 126 7.6E-47 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 APH_0675 cf28c4219d95b6114156b63351af45db 130 Gene3D G3DSA:3.90.1010.10 1 128 2.3E-50 T 11-10-2018 APH_0675 cf28c4219d95b6114156b63351af45db 130 SUPERFAMILY SSF82649 2 125 2.88E-43 T 11-10-2018 APH_0087 3ea3b8ed33dcd49d7880472a415d5e26 156 Pfam PF00551 Formyl transferase 14 123 2.6E-39 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_0087 3ea3b8ed33dcd49d7880472a415d5e26 156 Gene3D G3DSA:3.40.50.170 1 156 1.5E-64 T 11-10-2018 APH_0087 3ea3b8ed33dcd49d7880472a415d5e26 156 SUPERFAMILY SSF53328 14 142 1.83E-43 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APH_1101 074c286b4906f14ca1bedff24ff26812 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APH_1101 074c286b4906f14ca1bedff24ff26812 178 Gene3D G3DSA:3.90.80.10 5 178 2.3E-72 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APH_1101 074c286b4906f14ca1bedff24ff26812 178 SUPERFAMILY SSF50324 3 172 4.32E-60 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APH_1101 074c286b4906f14ca1bedff24ff26812 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 33.806 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APH_1101 074c286b4906f14ca1bedff24ff26812 178 Pfam PF00719 Inorganic pyrophosphatase 18 170 4.2E-49 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 APH_0379 466b3c3f322fcacb3876e6d7cbc8aabe 146 Pfam PF00692 dUTPase 15 145 5.6E-32 T 11-10-2018 IPR029054 dUTPase-like APH_0379 466b3c3f322fcacb3876e6d7cbc8aabe 146 SUPERFAMILY SSF51283 4 146 3.01E-51 T 11-10-2018 IPR036157 dUTPase-like superfamily APH_0379 466b3c3f322fcacb3876e6d7cbc8aabe 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 146 33.367 T 11-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 APH_0379 466b3c3f322fcacb3876e6d7cbc8aabe 146 Gene3D G3DSA:2.70.40.10 2 145 1.8E-53 T 11-10-2018 IPR036157 dUTPase-like superfamily APH_0706 cf5889b7eebadbc0674c512190b4c994 202 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 13 199 29.556 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APH_0706 cf5889b7eebadbc0674c512190b4c994 202 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APH_0706 cf5889b7eebadbc0674c512190b4c994 202 Pfam PF01227 GTP cyclohydrolase I 18 197 1.2E-56 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APH_0706 cf5889b7eebadbc0674c512190b4c994 202 Gene3D G3DSA:1.10.286.10 12 59 2.7E-15 T 11-10-2018 APH_0706 cf5889b7eebadbc0674c512190b4c994 202 Gene3D G3DSA:3.30.1130.10 67 201 2.4E-43 T 11-10-2018 APH_0706 cf5889b7eebadbc0674c512190b4c994 202 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 APH_0706 cf5889b7eebadbc0674c512190b4c994 202 SUPERFAMILY SSF55620 12 199 4.6E-59 T 11-10-2018 APH_0465 9e5c97ace3528b369c253563f6c306b0 159 Hamap MF_00984 Single-stranded DNA-binding protein. 6 119 30.595 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 APH_0465 9e5c97ace3528b369c253563f6c306b0 159 Pfam PF00436 Single-strand binding protein family 6 106 4.6E-33 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 APH_0465 9e5c97ace3528b369c253563f6c306b0 159 Gene3D G3DSA:2.40.50.140 2 121 2.5E-41 T 11-10-2018 APH_0465 9e5c97ace3528b369c253563f6c306b0 159 SUPERFAMILY SSF50249 5 159 6.17E-43 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_1332 d94a18b02fa560e695184d13dd289097 209 Gene3D G3DSA:3.90.870.10 3 209 3.0E-74 T 11-10-2018 APH_1332 d94a18b02fa560e695184d13dd289097 209 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 14 205 1.6E-69 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_1332 d94a18b02fa560e695184d13dd289097 209 SUPERFAMILY SSF55821 8 206 9.39E-74 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APH_0909 7c3f62f2801296a63a989d2729326a68 337 Gene3D G3DSA:3.40.50.300 100 330 2.8E-10 T 11-10-2018 APH_0909 7c3f62f2801296a63a989d2729326a68 337 Gene3D G3DSA:3.30.450.90 3 98 1.3E-7 T 11-10-2018 APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 SUPERFAMILY SSF53335 4 293 1.18E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 Gene3D G3DSA:3.40.50.150 4 290 1.9E-99 T 11-10-2018 APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 SUPERFAMILY SSF81799 111 214 2.09E-29 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 Gene3D G3DSA:1.10.150.170 109 215 1.9E-99 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 PIRSF PIRSF004486 1 295 3.8E-103 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 294 35.004 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 APH_0690 6d3c63d9897d665a5a99fc039a91ac68 295 Pfam PF01795 MraW methylase family 3 292 1.1E-90 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 128 188 9.0E-27 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 SMART SM00932 3 90 7.6E-43 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 SUPERFAMILY SSF110836 1 87 3.66E-27 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 SUPERFAMILY SSF117916 105 187 1.05E-24 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 Gene3D G3DSA:3.30.300.130 109 188 8.5E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 87 4.6E-28 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 PIRSF PIRSF036773 1 188 9.6E-65 T 11-10-2018 IPR035433 NFU1-like APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 Pfam PF01106 NifU-like domain 120 186 5.9E-25 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APH_0067 b36c4c5c800be360cc60d8f0be17fef4 188 Gene3D G3DSA:3.30.1370.70 1 93 6.9E-28 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily APH_1397 a7a56f5314e039ee017f42df61abd2ed 214 Pfam PF03379 CcmB protein 2 201 4.5E-15 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_1397 a7a56f5314e039ee017f42df61abd2ed 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 44 61 1.3E-11 T 11-10-2018 APH_1397 a7a56f5314e039ee017f42df61abd2ed 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 67 90 1.3E-11 T 11-10-2018 APH_1397 a7a56f5314e039ee017f42df61abd2ed 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 185 208 1.3E-11 T 11-10-2018 APH_1397 a7a56f5314e039ee017f42df61abd2ed 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 148 167 1.3E-11 T 11-10-2018 APH_1397 a7a56f5314e039ee017f42df61abd2ed 214 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 92 110 1.3E-11 T 11-10-2018 APH_0090 d125b78fecb374c314c4a4f05d154d09 73 Gene3D G3DSA:2.30.170.50 1 73 3.4E-8 T 11-10-2018 APH_0090 d125b78fecb374c314c4a4f05d154d09 73 SUPERFAMILY SSF143800 1 72 1.92E-11 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0090 d125b78fecb374c314c4a4f05d154d09 73 Pfam PF01197 Ribosomal protein L31 1 71 1.2E-13 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_1073 6af490a73fe877fcb7a00a16828836bf 189 PIRSF PIRSF039093 5 189 2.5E-82 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APH_1073 6af490a73fe877fcb7a00a16828836bf 189 Pfam PF00227 Proteasome subunit 11 186 6.3E-19 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 APH_1073 6af490a73fe877fcb7a00a16828836bf 189 Gene3D G3DSA:3.60.20.10 7 188 1.7E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APH_1073 6af490a73fe877fcb7a00a16828836bf 189 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 187 38.435 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APH_1073 6af490a73fe877fcb7a00a16828836bf 189 SUPERFAMILY SSF56235 9 187 2.65E-53 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal APH_0783 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 Gene3D G3DSA:3.40.50.300 8 141 4.2E-33 T 11-10-2018 APH_0783 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 SMART SM00382 19 145 4.1E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain APH_0783 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 SUPERFAMILY SSF52540 14 169 2.87E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0783 e19c967eb4eeb5e5e6624ac28f3e4cc1 292 Pfam PF13177 DNA polymerase III, delta subunit 15 145 1.4E-24 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:3.10.20.310 22 90 1.4E-10 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:3.10.20.310 348 422 8.7E-22 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 350 422 1.1E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 173 264 3.1E-7 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 91 169 1.8E-12 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF07244 Surface antigen variable number repeat 286 344 1.6E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:3.10.20.310 91 170 2.0E-17 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:2.40.160.50 424 770 5.4E-73 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:3.10.20.310 266 347 5.5E-7 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Pfam PF01103 Surface antigen 449 758 1.3E-51 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 772 20.528 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 Gene3D G3DSA:3.10.20.310 172 265 1.6E-15 T 11-10-2018 APH_1210 55bca574e738a6d016df3bc9e0572b35 772 PIRSF PIRSF006076 1 768 2.8E-192 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APH_0940 26a202e0772173d336310a674b94f43c 234 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 207 5.2E-28 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel APH_0565 cde7007cbc93164405368a99dd9c4a9d 93 Pfam PF11020 Domain of unknown function (DUF2610) 4 83 1.2E-41 T 11-10-2018 IPR021277 Protein of unknown function DUF2610 APH_1239 9a3431639d2f13257981a2671561b5f6 364 Pfam PF01617 Surface antigen 39 357 5.0E-50 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1239 9a3431639d2f13257981a2671561b5f6 364 SUPERFAMILY SSF56925 39 353 4.37E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1215 18d09b34e696e3953022a6dd5a4a1f46 433 Pfam PF01617 Surface antigen 27 416 5.4E-78 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1215 18d09b34e696e3953022a6dd5a4a1f46 433 SUPERFAMILY SSF56925 27 417 3.92E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1215 18d09b34e696e3953022a6dd5a4a1f46 433 Gene3D G3DSA:2.40.160.20 233 386 1.5E-9 T 11-10-2018 APH_1231 711288f1b0a527a475e734feec0aca59 408 Gene3D G3DSA:3.40.50.11280 56 191 6.8E-30 T 11-10-2018 APH_1231 711288f1b0a527a475e734feec0aca59 408 Pfam PF08886 Glutamate-cysteine ligase 12 393 5.2E-140 T 11-10-2018 IPR011718 Glutamate--cysteine ligase GshA APH_0081 9fb993e0907aa04cc2cc047166bd7f7f 271 Gene3D G3DSA:2.60.40.2500 157 268 7.0E-30 T 11-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily APH_0081 9fb993e0907aa04cc2cc047166bd7f7f 271 Pfam PF03524 Conjugal transfer protein 32 256 9.7E-61 T 11-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 SUPERFAMILY SSF51998 87 568 2.96E-136 T 11-10-2018 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 Pfam PF02867 Ribonucleotide reductase, barrel domain 418 563 2.3E-33 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 Gene3D G3DSA:3.20.70.20 5 574 7.2E-172 T 11-10-2018 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 PRINTS PR01183 Ribonucleotide reductase large chain signature 162 181 2.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 PRINTS PR01183 Ribonucleotide reductase large chain signature 353 375 2.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 PRINTS PR01183 Ribonucleotide reductase large chain signature 381 404 2.1E-14 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 SUPERFAMILY SSF48168 12 84 1.24E-16 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 Pfam PF02867 Ribonucleotide reductase, barrel domain 89 409 4.9E-76 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_0331 105198ad0989f1ae95f26f4784d6abf4 603 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 20 85 1.7E-14 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 APH_1185 4dd695a0756cd927c156d9a5eff40957 56 Pfam PF01617 Surface antigen 10 53 1.5E-15 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0544 c94897e4740ff40525b199dab072628a 227 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 5 212 33.96 T 11-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 APH_0544 c94897e4740ff40525b199dab072628a 227 Pfam PF02666 Phosphatidylserine decarboxylase 42 208 1.0E-27 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 APH_0348 e15325689933570558bc549db5653f08 506 Pfam PF00361 Proton-conducting membrane transporter 137 323 1.9E-15 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0502 00543840dd0ec4eff7d55911a739e373 246 PIRSF PIRSF001430 1 246 2.5E-71 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0502 00543840dd0ec4eff7d55911a739e373 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 246 33.377 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0502 00543840dd0ec4eff7d55911a739e373 246 Gene3D G3DSA:3.30.70.580 1 107 2.4E-32 T 11-10-2018 APH_0502 00543840dd0ec4eff7d55911a739e373 246 Pfam PF01416 tRNA pseudouridine synthase 145 246 1.8E-27 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0502 00543840dd0ec4eff7d55911a739e373 246 Pfam PF01416 tRNA pseudouridine synthase 5 105 2.5E-10 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0502 00543840dd0ec4eff7d55911a739e373 246 Gene3D G3DSA:3.30.70.660 108 245 2.7E-45 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 APH_0502 00543840dd0ec4eff7d55911a739e373 246 SUPERFAMILY SSF55120 1 246 5.9E-77 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 APH_0163 fe5eadd88659382b0c165e51001eb27e 288 Gene3D G3DSA:3.30.1360.170 17 253 9.0E-72 T 11-10-2018 APH_0163 fe5eadd88659382b0c165e51001eb27e 288 SUPERFAMILY SSF69796 23 245 7.85E-67 T 11-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 APH_0163 fe5eadd88659382b0c165e51001eb27e 288 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 28 246 28.28 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 APH_0163 fe5eadd88659382b0c165e51001eb27e 288 Pfam PF02511 Thymidylate synthase complementing protein 34 232 2.7E-55 T 11-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 Gene3D G3DSA:4.10.640.10 22 96 1.6E-23 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 46 95 5.0E-19 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 85 95 5.5E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 53 63 5.5E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 71 85 5.5E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 63 70 5.5E-16 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 Pfam PF01084 Ribosomal protein S18 44 93 4.4E-22 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 SUPERFAMILY SSF46911 25 96 1.23E-23 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0152 e5d83f6bddce50ac80bef72ef669f75a 96 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 27 96 17.158 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0317 48de5e6087e2477de62ae9081d607e54 319 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 186 1.4E-29 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APH_0317 48de5e6087e2477de62ae9081d607e54 319 SUPERFAMILY SSF53901 7 318 6.48E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 APH_0317 48de5e6087e2477de62ae9081d607e54 319 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 319 65.481 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APH_0317 48de5e6087e2477de62ae9081d607e54 319 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 230 318 8.0E-33 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 APH_0317 48de5e6087e2477de62ae9081d607e54 319 Gene3D G3DSA:3.40.47.10 1 319 3.2E-118 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 APH_0594 48d6cfb243c3415d35cc85e06b04d474 210 SUPERFAMILY SSF118215 27 199 2.09E-13 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_1075 bb1ae43e932b7d03eb88abb162b60efe 231 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 2 230 35.464 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 APH_1075 bb1ae43e932b7d03eb88abb162b60efe 231 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 APH_1075 bb1ae43e932b7d03eb88abb162b60efe 231 Pfam PF01209 ubiE/COQ5 methyltransferase family 4 230 1.6E-80 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 APH_1075 bb1ae43e932b7d03eb88abb162b60efe 231 Gene3D G3DSA:3.40.50.150 13 231 4.9E-69 T 11-10-2018 APH_1075 bb1ae43e932b7d03eb88abb162b60efe 231 SUPERFAMILY SSF53335 6 229 2.3E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_1077 05cdb6c382ad187c23ef1d3e3cceeb9b 277 Pfam PF01617 Surface antigen 182 265 1.3E-19 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1365 4167d5e3e657466e7b8a2f6ccb658c07 52 Gene3D G3DSA:2.60.260.40 5 52 3.3E-12 T 11-10-2018 APH_1365 4167d5e3e657466e7b8a2f6ccb658c07 52 Pfam PF10276 Zinc-finger domain 13 49 4.0E-10 T 11-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 Pfam PF00574 Clp protease 13 192 3.2E-85 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 SUPERFAMILY SSF52096 10 192 1.8E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.578 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 Gene3D G3DSA:3.90.226.10 1 195 2.7E-82 T 11-10-2018 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-10-2018 IPR018215 ClpP, Ser active site APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.1E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.1E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.1E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.1E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_0970 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.1E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APH_0505 7480d6e64789422047cc938a43187a5f 273 SUPERFAMILY SSF56219 2 272 1.31E-76 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APH_0505 7480d6e64789422047cc938a43187a5f 273 Gene3D G3DSA:3.60.10.10 2 273 5.8E-69 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily APH_0505 7480d6e64789422047cc938a43187a5f 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 264 3.3E-13 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase APH_1206 93e0d359e890ff34e68ccf9ab449d204 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 72 4.2E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_1206 93e0d359e890ff34e68ccf9ab449d204 181 PIRSF PIRSF000847 1 181 3.9E-44 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 APH_1206 93e0d359e890ff34e68ccf9ab449d204 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APH_1206 93e0d359e890ff34e68ccf9ab449d204 181 Gene3D G3DSA:1.20.120.1760 1 176 1.7E-13 T 11-10-2018 APH_0222 d40765509010e881c6aa8c444f76ca49 311 Gene3D G3DSA:3.30.540.10 8 295 2.7E-97 T 11-10-2018 APH_0222 d40765509010e881c6aa8c444f76ca49 311 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 5 307 4.6E-107 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APH_0222 d40765509010e881c6aa8c444f76ca49 311 SUPERFAMILY SSF56655 4 295 2.08E-76 T 11-10-2018 APH_0222 d40765509010e881c6aa8c444f76ca49 311 Gene3D G3DSA:3.40.190.90 122 282 2.7E-97 T 11-10-2018 APH_0222 d40765509010e881c6aa8c444f76ca49 311 PIRSF PIRSF004532 2 310 1.6E-97 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APH_0941 ab9ead11523b5956dc5c54bac36bc3f3 275 SUPERFAMILY SSF74653 175 272 2.16E-9 T 11-10-2018 APH_0941 ab9ead11523b5956dc5c54bac36bc3f3 275 Gene3D G3DSA:3.30.1150.10 166 274 9.4E-17 T 11-10-2018 APH_0372 c85590b7e89bb841db5ec60dd00d4a23 97 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 7 89 9.0E-23 T 11-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB APH_0611 f08ba4ee894b0df63e7424012dd989f9 394 SUPERFAMILY SSF118215 13 382 3.53E-45 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_0611 f08ba4ee894b0df63e7424012dd989f9 394 Gene3D G3DSA:1.10.3860.10 128 389 6.2E-26 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_0611 f08ba4ee894b0df63e7424012dd989f9 394 Pfam PF00375 Sodium:dicarboxylate symporter family 14 383 8.0E-36 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APH_0394 d2e8eeef3f2d45e2e7dd4e86b9769ca5 342 Gene3D G3DSA:2.40.50.100 57 185 6.8E-40 T 11-10-2018 APH_0394 d2e8eeef3f2d45e2e7dd4e86b9769ca5 342 Gene3D G3DSA:2.40.30.170 46 267 6.8E-40 T 11-10-2018 APH_0394 d2e8eeef3f2d45e2e7dd4e86b9769ca5 342 Gene3D G3DSA:1.10.287.470 92 151 6.8E-40 T 11-10-2018 APH_0394 d2e8eeef3f2d45e2e7dd4e86b9769ca5 342 Gene3D G3DSA:2.40.420.20 268 336 6.8E-40 T 11-10-2018 APH_0394 d2e8eeef3f2d45e2e7dd4e86b9769ca5 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 56 245 2.5E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APH_0394 d2e8eeef3f2d45e2e7dd4e86b9769ca5 342 SUPERFAMILY SSF111369 49 261 2.62E-21 T 11-10-2018 APH_0250 a5f831ff1bbd375ac9280e8757ac90ca 92 Gene3D G3DSA:1.10.730.10 1 81 1.6E-7 T 11-10-2018 APH_0250 a5f831ff1bbd375ac9280e8757ac90ca 92 SUPERFAMILY SSF47323 2 91 9.68E-11 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 APH_0250 a5f831ff1bbd375ac9280e8757ac90ca 92 Pfam PF08264 Anticodon-binding domain of tRNA 10 88 4.7E-9 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 APH_0422 7bfb3735576adcb47857a8cdcd15f243 327 PIRSF PIRSF000728 34 321 1.8E-79 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 APH_0422 7bfb3735576adcb47857a8cdcd15f243 327 Pfam PF00696 Amino acid kinase family 50 243 4.9E-22 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 APH_0422 7bfb3735576adcb47857a8cdcd15f243 327 SUPERFAMILY SSF53633 28 322 1.54E-64 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily APH_0422 7bfb3735576adcb47857a8cdcd15f243 327 Gene3D G3DSA:3.40.1160.10 28 326 1.5E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily APH_1359 dafb81e9e88747ab420b3049458fc70e 290 Gene3D G3DSA:2.40.160.20 65 246 1.9E-6 T 11-10-2018 APH_1359 dafb81e9e88747ab420b3049458fc70e 290 Pfam PF01617 Surface antigen 29 281 4.0E-20 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1359 dafb81e9e88747ab420b3049458fc70e 290 SUPERFAMILY SSF56925 92 238 2.62E-8 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1328 b7a7ac7caf1439e754f880d99cda02a7 206 Pfam PF01617 Surface antigen 144 206 1.9E-10 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0192 1724483144beed7ac05f65944c560c58 198 Pfam PF04972 BON domain 126 191 5.2E-12 T 11-10-2018 IPR007055 BON domain APH_0192 1724483144beed7ac05f65944c560c58 198 Pfam PF04972 BON domain 49 113 2.2E-10 T 11-10-2018 IPR007055 BON domain APH_0192 1724483144beed7ac05f65944c560c58 198 SMART SM00749 130 193 2.5E-8 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria APH_0192 1724483144beed7ac05f65944c560c58 198 SMART SM00749 54 117 11.0 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria APH_0987 850eeacb80acfb2f7928f086470811de 56 Pfam PF02416 mttA/Hcf106 family 3 44 5.6E-12 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APH_0987 850eeacb80acfb2f7928f086470811de 56 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 51 17.144 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APH_1076 06eabf7bc277c8d02a448097206777fd 76 Pfam PF01617 Surface antigen 1 59 1.3E-12 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 Gene3D G3DSA:3.10.580.10 179 327 5.2E-46 T 11-10-2018 APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF03471 Transporter associated domain 336 410 8.1E-16 T 11-10-2018 IPR005170 Transporter-associated domain APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 SUPERFAMILY SSF56176 333 416 2.7E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 SUPERFAMILY SSF54631 192 331 3.65E-28 T 11-10-2018 APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF01595 Domain of unknown function DUF21 3 178 2.7E-39 T 11-10-2018 IPR002550 CNNM, transmembrane domain APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 SMART SM01091 335 412 2.3E-18 T 11-10-2018 IPR005170 Transporter-associated domain APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 Gene3D G3DSA:3.30.465.10 334 410 4.0E-20 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF00571 CBS domain 274 319 1.6E-4 T 11-10-2018 IPR000644 CBS domain APH_0957 c0e8770ce372b95872dba6dd7f6061e2 422 Pfam PF00571 CBS domain 197 252 5.3E-4 T 11-10-2018 IPR000644 CBS domain APH_0975 73a0785d6d6889bd2b5cfc9a10b109eb 257 Gene3D G3DSA:3.40.630.30 150 252 7.2E-14 T 11-10-2018 APH_0975 73a0785d6d6889bd2b5cfc9a10b109eb 257 SUPERFAMILY SSF55729 160 253 1.31E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase APH_0975 73a0785d6d6889bd2b5cfc9a10b109eb 257 Pfam PF00583 Acetyltransferase (GNAT) family 161 243 5.8E-10 T 11-10-2018 IPR000182 GNAT domain APH_0625 e1f6cc8e582a418af7509bebb8fd7556 322 Gene3D G3DSA:3.40.190.10 111 249 1.1E-86 T 11-10-2018 APH_0625 e1f6cc8e582a418af7509bebb8fd7556 322 Pfam PF16868 NMT1-like family 20 318 1.4E-76 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family APH_0625 e1f6cc8e582a418af7509bebb8fd7556 322 Gene3D G3DSA:3.40.190.10 20 318 1.1E-86 T 11-10-2018 APH_0625 e1f6cc8e582a418af7509bebb8fd7556 322 SUPERFAMILY SSF53850 16 320 8.45E-66 T 11-10-2018 APH_1248 7ac1c9b5528342ffb17aea03ddf87487 253 Pfam PF01617 Surface antigen 157 238 6.1E-20 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1048 c3ae023e0a0fbea427f98c1ae3427f26 338 Gene3D G3DSA:3.20.20.70 10 338 3.4E-84 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_1048 c3ae023e0a0fbea427f98c1ae3427f26 338 Pfam PF03060 Nitronate monooxygenase 10 327 1.1E-46 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APH_1048 c3ae023e0a0fbea427f98c1ae3427f26 338 SUPERFAMILY SSF51412 13 330 8.7E-50 T 11-10-2018 APH_0526 60e0c95dfc3f4624df1f65cc2f2bc422 141 Gene3D G3DSA:2.40.50.140 29 133 1.9E-30 T 11-10-2018 APH_0526 60e0c95dfc3f4624df1f65cc2f2bc422 141 SUPERFAMILY SSF82093 29 131 4.97E-31 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 APH_0526 60e0c95dfc3f4624df1f65cc2f2bc422 141 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 28.208 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 APH_0526 60e0c95dfc3f4624df1f65cc2f2bc422 141 Pfam PF03100 CcmE 3 128 1.7E-36 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 APH_1282 58c83bf4aacacd25540dec1cb2a95f46 125 SUPERFAMILY SSF46955 23 122 5.04E-15 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily APH_1282 58c83bf4aacacd25540dec1cb2a95f46 125 SMART SM00422 21 90 6.4E-4 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APH_1282 58c83bf4aacacd25540dec1cb2a95f46 125 Pfam PF13411 MerR HTH family regulatory protein 22 88 2.1E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APH_1282 58c83bf4aacacd25540dec1cb2a95f46 125 Gene3D G3DSA:1.10.1660.10 17 94 2.2E-18 T 11-10-2018 APH_0153 2908d5f661d395c0c62bd32a355b3730 205 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 2 147 20.885 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0153 2908d5f661d395c0c62bd32a355b3730 205 Pfam PF01281 Ribosomal protein L9, N-terminal domain 4 45 1.5E-13 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0153 2908d5f661d395c0c62bd32a355b3730 205 Gene3D G3DSA:3.10.430.100 61 147 6.2E-19 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily APH_0153 2908d5f661d395c0c62bd32a355b3730 205 SUPERFAMILY SSF55653 58 147 1.57E-21 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily APH_0153 2908d5f661d395c0c62bd32a355b3730 205 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 9.3E-19 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal APH_0153 2908d5f661d395c0c62bd32a355b3730 205 Gene3D G3DSA:3.40.5.10 2 50 1.0E-12 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0153 2908d5f661d395c0c62bd32a355b3730 205 SUPERFAMILY SSF55658 3 56 1.29E-10 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 460 16.12 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PIRSF PIRSF002869 1 500 4.5E-124 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 402 419 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 129 153 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 31 50 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 252 278 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 153 174 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 350 369 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 PRINTS PR01806 Virulence factor MviN signature 50 66 5.3E-53 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_1377 38815fcbdcdf5ff0cae89150b9585e7b 502 Pfam PF03023 MviN-like protein 26 466 1.4E-87 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ APH_0304 327d21e1c1f3e30dccc68b3031d2c3ff 132 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 121 23.366 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0304 327d21e1c1f3e30dccc68b3031d2c3ff 132 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0304 327d21e1c1f3e30dccc68b3031d2c3ff 132 Pfam PF01196 Ribosomal protein L17 20 121 2.5E-28 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0304 327d21e1c1f3e30dccc68b3031d2c3ff 132 SUPERFAMILY SSF64263 1 124 1.96E-40 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0304 327d21e1c1f3e30dccc68b3031d2c3ff 132 Gene3D G3DSA:3.90.1030.10 3 128 1.6E-40 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1124 68ed70587a166251c5124a2a2853c8f6 56 Pfam PF01617 Surface antigen 5 49 2.5E-17 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1124 68ed70587a166251c5124a2a2853c8f6 56 SUPERFAMILY SSF56925 10 45 4.32E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 PRINTS PR01415 Ankyrin repeat signature 500 515 6.1E-6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 PRINTS PR01415 Ankyrin repeat signature 619 633 6.1E-6 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 468 868 2.49E-25 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Pfam PF12796 Ankyrin repeats (3 copies) 691 760 3.3E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Pfam PF12796 Ankyrin repeats (3 copies) 124 213 2.7E-6 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 203 358 1.4E-10 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 564 685 4.0E-5 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SUPERFAMILY SSF48403 15 868 1.81E-43 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 686 874 1.1E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 671 708 570.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 44 73 9.8 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 465 495 1200.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 827 856 0.0095 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 602 632 67.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 712 741 6.7 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 144 174 160.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 216 245 0.053 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 178 212 75.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 780 811 990.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 745 774 8.3 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 388 419 2300.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 562 595 720.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 SMART SM00248 499 528 0.32 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Pfam PF00023 Ankyrin repeat 827 858 0.028 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 359 526 1.2E-14 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_0740 f6e8418cbedbf6a5717ee64e43ae8045 1232 Gene3D G3DSA:1.25.40.20 3 202 8.6E-20 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily APH_1155 e26303805c513aaa1d4b439f46c18659 419 SUPERFAMILY SSF56925 51 407 4.71E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1155 e26303805c513aaa1d4b439f46c18659 419 Pfam PF01617 Surface antigen 51 415 8.5E-73 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1155 e26303805c513aaa1d4b439f46c18659 419 Gene3D G3DSA:2.40.160.20 223 411 2.1E-9 T 11-10-2018 APH_0995 9f3c0a1815002b7239af1a33ec52bb81 363 Pfam PF01594 AI-2E family transporter 7 349 2.3E-43 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like APH_0423 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 231 258 5.3E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 160 189 5.3E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 259 274 5.3E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 35 51 5.3E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 PRINTS PR00073 Coprogen oxidase signature 123 145 5.3E-43 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 Gene3D G3DSA:3.40.1500.10 1 274 3.0E-103 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 Pfam PF01218 Coproporphyrinogen III oxidase 9 273 2.3E-96 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 PIRSF PIRSF000166 1 274 1.7E-108 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0423 6750cc9d6f618ed9e484832a477496eb 274 SUPERFAMILY SSF102886 3 273 4.19E-107 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 APH_0156 39b38f9c4a3ef5b8163df29640c9a32b 125 SUPERFAMILY SSF55387 13 124 6.45E-23 T 11-10-2018 APH_0156 39b38f9c4a3ef5b8163df29640c9a32b 125 SMART SM01219 22 125 1.3E-23 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 APH_0156 39b38f9c4a3ef5b8163df29640c9a32b 125 Pfam PF01491 Frataxin-like domain 26 123 3.5E-15 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 APH_0156 39b38f9c4a3ef5b8163df29640c9a32b 125 Gene3D G3DSA:3.30.920.10 25 124 1.8E-14 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 APH_0359 8b98203948e03bf6e301c4e036ab1f32 103 Gene3D G3DSA:2.30.170.40 8 102 6.0E-26 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0359 8b98203948e03bf6e301c4e036ab1f32 103 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 17.961 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0359 8b98203948e03bf6e301c4e036ab1f32 103 SUPERFAMILY SSF143800 2 76 7.85E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0359 8b98203948e03bf6e301c4e036ab1f32 103 Pfam PF00830 Ribosomal L28 family 3 60 3.3E-22 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0766 d0bb165fe383f972eeb5b3e700cf4027 261 Pfam PF08241 Methyltransferase domain 88 135 1.4E-6 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 APH_0766 d0bb165fe383f972eeb5b3e700cf4027 261 Gene3D G3DSA:3.40.50.150 35 240 2.3E-12 T 11-10-2018 APH_0766 d0bb165fe383f972eeb5b3e700cf4027 261 SUPERFAMILY SSF53335 64 210 3.22E-14 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0566 cbd87d07e0bc20e90eb7071f140311a9 326 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 45 270 3.2E-53 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 APH_0566 cbd87d07e0bc20e90eb7071f140311a9 326 Gene3D G3DSA:3.40.50.12710 1 325 1.9E-87 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 APH_0566 cbd87d07e0bc20e90eb7071f140311a9 326 SUPERFAMILY SSF53335 2 323 2.71E-99 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_1209 5436dd9d8b33b8f6901829d8b71b5459 185 SMART SM00935 15 175 1.2E-32 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 APH_1209 5436dd9d8b33b8f6901829d8b71b5459 185 Pfam PF03938 Outer membrane protein (OmpH-like) 16 174 8.1E-21 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 APH_1209 5436dd9d8b33b8f6901829d8b71b5459 185 Gene3D G3DSA:3.30.910.20 23 185 1.4E-24 T 11-10-2018 IPR024930 Skp domain superfamily APH_1209 5436dd9d8b33b8f6901829d8b71b5459 185 SUPERFAMILY SSF111384 34 175 1.31E-19 T 11-10-2018 APH_0293 96f50a92ba7c05328cb384f60ae80ff9 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.46 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid APH_0293 96f50a92ba7c05328cb384f60ae80ff9 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.3E-25 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0293 96f50a92ba7c05328cb384f60ae80ff9 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 APH_0293 96f50a92ba7c05328cb384f60ae80ff9 101 SUPERFAMILY SSF57716 3 101 1.43E-35 T 11-10-2018 APH_0293 96f50a92ba7c05328cb384f60ae80ff9 101 Gene3D G3DSA:4.10.830.10 40 101 6.8E-23 T 11-10-2018 APH_1186 0fe0218e4abe2a956bc977185afa5854 260 Pfam PF01617 Surface antigen 144 227 7.5E-20 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0328 6ebbba338e88aa5aadd3d1422171525d 315 SUPERFAMILY SSF54534 223 286 2.16E-6 T 11-10-2018 APH_0328 6ebbba338e88aa5aadd3d1422171525d 315 Gene3D G3DSA:3.10.50.40 207 301 3.6E-5 T 11-10-2018 APH_0208 ff18dff85f3fdd3d660457650a4160e3 424 SUPERFAMILY SSF48452 262 389 5.48E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_0208 ff18dff85f3fdd3d660457650a4160e3 424 Gene3D G3DSA:1.25.40.10 265 404 8.8E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_0208 ff18dff85f3fdd3d660457650a4160e3 424 Gene3D G3DSA:3.30.2010.10 26 108 1.4E-6 T 11-10-2018 APH_0208 ff18dff85f3fdd3d660457650a4160e3 424 Pfam PF01435 Peptidase family M48 34 216 3.4E-28 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APH_1168 f116a72811f9436bda9d298123c10454 366 Pfam PF01617 Surface antigen 39 359 1.2E-49 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1168 f116a72811f9436bda9d298123c10454 366 SUPERFAMILY SSF56925 39 355 2.02E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1098 380b7f93c69904c44b121706c89930af 204 SMART SM00474 1 168 2.6E-34 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_1098 380b7f93c69904c44b121706c89930af 204 Gene3D G3DSA:3.30.420.10 8 188 3.0E-41 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 APH_1098 380b7f93c69904c44b121706c89930af 204 Pfam PF01612 3'-5' exonuclease 19 168 7.2E-36 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APH_1098 380b7f93c69904c44b121706c89930af 204 SUPERFAMILY SSF53098 18 190 3.36E-48 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily APH_1160 ad873bec23347c0542af8cc4c9c7c67b 156 Pfam PF01252 Signal peptidase (SPase) II 12 146 1.7E-31 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 APH_1160 ad873bec23347c0542af8cc4c9c7c67b 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 154 14.091 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 APH_1160 ad873bec23347c0542af8cc4c9c7c67b 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 1.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 APH_1160 ad873bec23347c0542af8cc4c9c7c67b 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 1.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 APH_1160 ad873bec23347c0542af8cc4c9c7c67b 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 1.3E-14 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 APH_0280 70c063cf9468d745b6e24d6dfce23c6a 220 Gene3D G3DSA:2.40.30.10 115 207 1.6E-16 T 11-10-2018 APH_0280 70c063cf9468d745b6e24d6dfce23c6a 220 ProSitePatterns PS00474 Ribosomal protein L3 signature. 97 120 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site APH_0280 70c063cf9468d745b6e24d6dfce23c6a 220 Pfam PF00297 Ribosomal protein L3 95 178 9.0E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0280 70c063cf9468d745b6e24d6dfce23c6a 220 SUPERFAMILY SSF50447 3 209 2.56E-62 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily APH_1136 98978646ad606e0aa187163bf5f05e60 144 Pfam PF04956 TrbC/VIRB2 family 26 129 5.9E-16 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_0145 ee9919d93e92efbc74342b2ae1697fb9 335 Pfam PF01617 Surface antigen 16 328 4.4E-50 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0145 ee9919d93e92efbc74342b2ae1697fb9 335 SUPERFAMILY SSF56925 16 324 6.83E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0676 0d024f2a56bca4ea5b615c1e718519ab 121 SUPERFAMILY SSF89360 10 110 8.63E-21 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 APH_0676 0d024f2a56bca4ea5b615c1e718519ab 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 12 117 4.0E-13 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 APH_0676 0d024f2a56bca4ea5b615c1e718519ab 121 Gene3D G3DSA:2.60.300.12 10 121 2.1E-28 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 APH_0676 0d024f2a56bca4ea5b615c1e718519ab 121 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 APH_1376 244169f6994c8dab6ea8edbe1ce15865 277 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 19 265 5.7E-67 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 APH_1376 244169f6994c8dab6ea8edbe1ce15865 277 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 16 271 17.468 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 APH_0272 75fd68fef70482eca41e4587cf50ba26 298 Pfam PF01343 Peptidase family S49 110 259 2.6E-44 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APH_0272 75fd68fef70482eca41e4587cf50ba26 298 Gene3D G3DSA:3.90.226.10 57 253 2.6E-65 T 11-10-2018 APH_0272 75fd68fef70482eca41e4587cf50ba26 298 SUPERFAMILY SSF52096 48 245 1.08E-39 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily APH_0272 75fd68fef70482eca41e4587cf50ba26 298 Gene3D G3DSA:3.40.1750.20 149 215 2.6E-65 T 11-10-2018 APH_0006 5d8c2b93b8cd653b79e51691ea5da1fc 221 Gene3D G3DSA:3.40.50.880 1 221 3.0E-75 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0006 5d8c2b93b8cd653b79e51691ea5da1fc 221 Pfam PF01965 DJ-1/PfpI family 14 153 2.2E-7 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 APH_0006 5d8c2b93b8cd653b79e51691ea5da1fc 221 SUPERFAMILY SSF52317 1 214 5.35E-47 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_1402 28d234aab531fb0dae73f05934419b1b 740 SUPERFAMILY SSF52540 117 556 1.75E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1402 28d234aab531fb0dae73f05934419b1b 740 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 123 566 1.2E-150 T 11-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 APH_1402 28d234aab531fb0dae73f05934419b1b 740 Gene3D G3DSA:3.40.50.300 324 559 5.0E-43 T 11-10-2018 APH_0318 99ce2d213899974bda04effbd8512830 107 Pfam PF01617 Surface antigen 71 101 3.3E-6 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1352 ca70a4bc8107d68d247e2bcac4673736 298 SUPERFAMILY SSF56925 176 298 9.94E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1352 ca70a4bc8107d68d247e2bcac4673736 298 Pfam PF01617 Surface antigen 140 298 6.6E-52 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0938 be8552c68fb9ab668c8ab96639bebfb4 115 SUPERFAMILY SSF56925 9 63 3.66E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0938 be8552c68fb9ab668c8ab96639bebfb4 115 Pfam PF01617 Surface antigen 2 58 1.2E-17 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1010 1029b30ebc03b52a5752188639d8dbd6 220 Pfam PF02230 Phospholipase/Carboxylesterase 11 212 1.8E-34 T 11-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 APH_1010 1029b30ebc03b52a5752188639d8dbd6 220 SUPERFAMILY SSF53474 13 214 7.16E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_1010 1029b30ebc03b52a5752188639d8dbd6 220 Gene3D G3DSA:3.40.50.1820 10 213 3.0E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold APH_0307 86f1501e54e1133ddbb5e61e415b76da 443 Pfam PF01235 Sodium:alanine symporter family 47 432 1.3E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_0307 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 190 208 1.7E-11 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_0307 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 305 323 1.7E-11 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_0307 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 79 101 1.7E-11 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_0307 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 343 365 1.7E-11 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_0307 86f1501e54e1133ddbb5e61e415b76da 443 PRINTS PR00175 Sodium/alanine symporter signature 404 424 1.7E-11 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APH_0790 f11ded897750ed0b81a5d0a05dc2230b 233 SUPERFAMILY SSF63892 2 232 1.83E-81 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APH_0790 f11ded897750ed0b81a5d0a05dc2230b 233 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 2 231 3.6E-82 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APH_0790 f11ded897750ed0b81a5d0a05dc2230b 233 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 233 92.69 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 APH_0790 f11ded897750ed0b81a5d0a05dc2230b 233 Gene3D G3DSA:3.20.20.70 1 233 1.5E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0761 10c54619a3d2fb5f7e8c47b5b14bae47 445 Gene3D G3DSA:3.30.420.240 266 426 8.7E-6 T 11-10-2018 APH_0761 10c54619a3d2fb5f7e8c47b5b14bae47 445 Pfam PF17289 Terminase RNaseH-like domain 283 423 4.9E-11 T 11-10-2018 IPR035421 Terminase, large subunit gp17-like APH_0541 8520eb3f9e4ecd2020ab4973f135f74f 122 Pfam PF14849 YidC periplasmic domain 1 39 4.6E-7 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain APH_0541 8520eb3f9e4ecd2020ab4973f135f74f 122 Pfam PF02096 60Kd inner membrane protein 51 117 1.8E-17 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 SUPERFAMILY SSF51735 126 288 2.28E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 290 37.461 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 SUPERFAMILY SSF53223 7 125 6.91E-40 T 11-10-2018 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 79 104 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 289 6.9E-64 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 Gene3D G3DSA:3.40.50.10860 11 283 7.0E-104 T 11-10-2018 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 Gene3D G3DSA:3.40.50.720 9 266 7.0E-104 T 11-10-2018 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 208 237 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 37 59 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 113 134 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 78 105 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 159 179 1.6E-80 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0175 d960f951f9f6076c9c1e4fc9d33fa155 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 124 7.2E-39 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 APH_0994 d8a078dfc69f6224df5596be7f76e798 220 Pfam PF00308 Bacterial dnaA protein 83 190 4.2E-6 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA APH_0994 d8a078dfc69f6224df5596be7f76e798 220 SUPERFAMILY SSF52540 11 194 6.02E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0994 d8a078dfc69f6224df5596be7f76e798 220 Gene3D G3DSA:1.10.8.60 150 215 3.5E-5 T 11-10-2018 APH_0994 d8a078dfc69f6224df5596be7f76e798 220 Gene3D G3DSA:3.40.50.300 28 146 6.2E-14 T 11-10-2018 APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 Gene3D G3DSA:1.10.8.420 1 48 1.0E-9 T 11-10-2018 APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 Pfam PF02132 RecR protein 37 74 2.3E-12 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 Pfam PF13662 Toprim domain 77 167 8.8E-22 T 11-10-2018 IPR006171 TOPRIM domain APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 SMART SM00493 76 161 0.0087 T 11-10-2018 IPR006171 TOPRIM domain APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 SUPERFAMILY SSF111304 3 193 9.55E-67 T 11-10-2018 IPR023627 Recombination protein RecR APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 ProSitePatterns PS01300 RecR protein signature. 53 74 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 Gene3D G3DSA:3.40.1360.10 73 193 2.4E-39 T 11-10-2018 APH_0988 a2d9c5d5166e791efb9b28c1f67fa011 194 Hamap MF_00017 Recombination protein RecR [recR]. 1 194 85.147 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APH_0329 896d9908a799cc2829b87673869838a8 280 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 86 102 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site APH_0329 896d9908a799cc2829b87673869838a8 280 SUPERFAMILY SSF48576 8 235 1.15E-60 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily APH_0329 896d9908a799cc2829b87673869838a8 280 Pfam PF00348 Polyprenyl synthetase 39 232 4.6E-43 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 APH_0329 896d9908a799cc2829b87673869838a8 280 Gene3D G3DSA:1.10.600.10 3 280 5.5E-69 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily APH_0141 a97b7f38dfa8cc730414a8d27457b655 166 SUPERFAMILY SSF52833 43 165 1.75E-25 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_0141 a97b7f38dfa8cc730414a8d27457b655 166 Gene3D G3DSA:3.40.30.10 30 166 6.2E-26 T 11-10-2018 APH_0141 a97b7f38dfa8cc730414a8d27457b655 166 Pfam PF08534 Redoxin 34 151 2.8E-9 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 APH_0439 fc2b9a77ff4ee0a59caf4bcb68d941bb 464 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 460 15.343 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APH_0439 fc2b9a77ff4ee0a59caf4bcb68d941bb 464 Pfam PF00361 Proton-conducting membrane transporter 120 402 7.9E-58 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0069 871265203f0dbfb8217e04bd3e17afa2 69 SUPERFAMILY SSF54285 5 69 5.52E-13 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APH_0069 871265203f0dbfb8217e04bd3e17afa2 69 Gene3D G3DSA:3.10.20.30 5 69 8.9E-17 T 11-10-2018 IPR012675 Beta-grasp domain superfamily APH_0069 871265203f0dbfb8217e04bd3e17afa2 69 Pfam PF02597 ThiS family 8 69 9.1E-10 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 APH_0149 0bad3eedfcbe218a9be2e415867f8144 859 Pfam PF11874 Domain of unknown function (DUF3394) 679 854 9.2E-35 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 APH_0149 0bad3eedfcbe218a9be2e415867f8144 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 372 2.5E-44 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APH_0149 0bad3eedfcbe218a9be2e415867f8144 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 398 672 1.9E-21 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APH_1158 e171845b05b1fe5c90da33a34ae79a2c 463 Pfam PF05193 Peptidase M16 inactive domain 195 368 3.9E-18 T 11-10-2018 IPR007863 Peptidase M16, C-terminal APH_1158 e171845b05b1fe5c90da33a34ae79a2c 463 SUPERFAMILY SSF63411 259 442 6.17E-31 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_1158 e171845b05b1fe5c90da33a34ae79a2c 463 Pfam PF00675 Insulinase (Peptidase family M16) 61 179 6.9E-5 T 11-10-2018 IPR011765 Peptidase M16, N-terminal APH_1158 e171845b05b1fe5c90da33a34ae79a2c 463 Gene3D G3DSA:3.30.830.10 34 242 4.3E-32 T 11-10-2018 APH_1158 e171845b05b1fe5c90da33a34ae79a2c 463 Gene3D G3DSA:3.30.830.10 255 441 7.0E-33 T 11-10-2018 APH_1158 e171845b05b1fe5c90da33a34ae79a2c 463 SUPERFAMILY SSF63411 30 233 5.33E-35 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APH_1358 b0d486be30bb3042b9ac5877089e5351 286 Pfam PF01617 Surface antigen 42 286 1.3E-39 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1358 b0d486be30bb3042b9ac5877089e5351 286 SUPERFAMILY SSF56925 104 286 8.63E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1358 b0d486be30bb3042b9ac5877089e5351 286 Gene3D G3DSA:2.40.160.20 79 252 1.2E-6 T 11-10-2018 APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 SMART SM00861 4 179 9.9E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 Pfam PF02780 Transketolase, C-terminal domain 197 319 6.7E-42 T 11-10-2018 IPR033248 Transketolase, C-terminal domain APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 Gene3D G3DSA:3.40.50.920 195 329 2.7E-49 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 Gene3D G3DSA:3.40.50.970 3 194 5.0E-85 T 11-10-2018 APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 SUPERFAMILY SSF52922 193 329 1.31E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 SUPERFAMILY SSF52518 2 207 4.17E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold APH_1308 12042c62ff1063a8e369d729b37a2ad8 332 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 1.3E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain APH_1221 acfdfb2e77054556f75cb2bdd80965fb 431 Pfam PF01617 Surface antigen 38 431 4.0E-82 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1221 acfdfb2e77054556f75cb2bdd80965fb 431 SUPERFAMILY SSF56925 38 431 2.25E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1221 acfdfb2e77054556f75cb2bdd80965fb 431 Gene3D G3DSA:2.40.160.20 72 393 3.3E-9 T 11-10-2018 APH_1311 720d92299749b11ea230697ca823416c 397 SUPERFAMILY SSF56925 39 381 3.4E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1311 720d92299749b11ea230697ca823416c 397 Gene3D G3DSA:2.40.160.20 246 386 2.6E-9 T 11-10-2018 APH_1311 720d92299749b11ea230697ca823416c 397 Pfam PF01617 Surface antigen 39 393 6.2E-74 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0395 b76a5e6dd5bbe5836ac02a6cad65d51d 81 Pfam PF01176 Translation initiation factor 1A / IF-1 10 76 7.0E-16 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APH_0395 b76a5e6dd5bbe5836ac02a6cad65d51d 81 Gene3D G3DSA:2.40.50.140 3 78 2.1E-22 T 11-10-2018 APH_0395 b76a5e6dd5bbe5836ac02a6cad65d51d 81 SUPERFAMILY SSF50249 3 80 3.0E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold APH_0262 a40ed15931f25cfbac7f8630c0e69e0d 331 SUPERFAMILY SSF52540 26 146 1.21E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0262 a40ed15931f25cfbac7f8630c0e69e0d 331 Gene3D G3DSA:3.40.50.300 11 177 1.4E-18 T 11-10-2018 APH_0262 a40ed15931f25cfbac7f8630c0e69e0d 331 Pfam PF03969 AFG1-like ATPase 15 331 6.5E-74 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 APH_1406 70de07fe48f831df956e763ce3419e25 238 Pfam PF04335 VirB8 protein 30 236 3.9E-56 T 11-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 APH_1406 70de07fe48f831df956e763ce3419e25 238 Gene3D G3DSA:3.10.450.230 97 238 1.3E-36 T 11-10-2018 APH_1406 70de07fe48f831df956e763ce3419e25 238 SUPERFAMILY SSF54427 99 237 1.23E-34 T 11-10-2018 IPR032710 NTF2-like domain superfamily APH_1406 70de07fe48f831df956e763ce3419e25 238 PIRSF PIRSF003299 14 238 3.2E-89 T 11-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 APH_0338 715a8c43e4bc2923d980c1786d6db497 205 Gene3D G3DSA:3.30.1330.60 34 159 2.4E-23 T 11-10-2018 IPR036737 OmpA-like domain superfamily APH_0338 715a8c43e4bc2923d980c1786d6db497 205 SUPERFAMILY SSF103088 48 159 4.32E-22 T 11-10-2018 IPR036737 OmpA-like domain superfamily APH_0338 715a8c43e4bc2923d980c1786d6db497 205 PRINTS PR01021 OMPA domain signature 82 97 7.2E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APH_0338 715a8c43e4bc2923d980c1786d6db497 205 PRINTS PR01021 OMPA domain signature 52 74 7.2E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APH_0338 715a8c43e4bc2923d980c1786d6db497 205 PRINTS PR01021 OMPA domain signature 97 113 7.2E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APH_0338 715a8c43e4bc2923d980c1786d6db497 205 Pfam PF00691 OmpA family 51 144 1.1E-13 T 11-10-2018 IPR006665 OmpA-like domain APH_0442 d930c063ea6aff82478da660c5b0561f 400 Pfam PF04551 GcpE protein 5 392 7.9E-94 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 APH_0442 d930c063ea6aff82478da660c5b0561f 400 PIRSF PIRSF004640 1 400 3.1E-121 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 APH_0442 d930c063ea6aff82478da660c5b0561f 400 Gene3D G3DSA:3.20.20.20 1 285 7.6E-76 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 APH_0442 d930c063ea6aff82478da660c5b0561f 400 Gene3D G3DSA:3.30.413.10 286 400 2.8E-35 T 11-10-2018 APH_0310 75fb8811c398f633a48e81e921ad1136 292 Pfam PF01040 UbiA prenyltransferase family 31 272 1.6E-50 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 APH_0310 75fb8811c398f633a48e81e921ad1136 292 Gene3D G3DSA:1.10.357.140 22 173 4.2E-36 T 11-10-2018 APH_0310 75fb8811c398f633a48e81e921ad1136 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site APH_0310 75fb8811c398f633a48e81e921ad1136 292 Gene3D G3DSA:1.20.120.1780 174 292 5.3E-17 T 11-10-2018 APH_1272 01804fd9620d804b8817d7539ff1a4b3 310 Pfam PF01617 Surface antigen 1 303 2.0E-46 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1272 01804fd9620d804b8817d7539ff1a4b3 310 SUPERFAMILY SSF56925 55 299 7.06E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0876 e6be08f988c95350506dbea3b922b6a8 241 SUPERFAMILY SSF55681 4 193 3.73E-44 T 11-10-2018 APH_0876 e6be08f988c95350506dbea3b922b6a8 241 Pfam PF03099 Biotin/lipoate A/B protein ligase family 14 138 7.7E-15 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 APH_0876 e6be08f988c95350506dbea3b922b6a8 241 Gene3D G3DSA:3.30.930.10 5 195 4.7E-43 T 11-10-2018 APH_1191 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 45 70 1.7E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1191 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 28 43 1.7E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1191 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 7 26 1.7E-16 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1191 658774fadc02ee9dbe5d963f46dab684 74 SUPERFAMILY SSF81333 3 71 8.24E-16 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily APH_1191 658774fadc02ee9dbe5d963f46dab684 74 Gene3D G3DSA:1.20.20.10 2 73 6.2E-20 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1191 658774fadc02ee9dbe5d963f46dab684 74 Pfam PF00137 ATP synthase subunit C 7 69 1.3E-11 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APH_1208 2baaea4982b7eded7c64e9582d9ead25 145 SUPERFAMILY SSF54637 2 143 7.31E-43 T 11-10-2018 IPR029069 HotDog domain superfamily APH_1208 2baaea4982b7eded7c64e9582d9ead25 145 Pfam PF07977 FabA-like domain 12 137 1.2E-31 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APH_1208 2baaea4982b7eded7c64e9582d9ead25 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 145 31.601 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 APH_1208 2baaea4982b7eded7c64e9582d9ead25 145 Gene3D G3DSA:3.10.129.10 1 145 5.7E-57 T 11-10-2018 APH_1147 d774824b5af4c21d4efe9e032748cbca 291 SMART SM00244 23 185 6.2E-31 T 11-10-2018 IPR001107 Band 7 domain APH_1147 d774824b5af4c21d4efe9e032748cbca 291 PIRSF PIRSF005651 2 290 5.1E-81 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 APH_1147 d774824b5af4c21d4efe9e032748cbca 291 SUPERFAMILY SSF117892 56 192 2.09E-24 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily APH_1147 d774824b5af4c21d4efe9e032748cbca 291 Pfam PF01145 SPFH domain / Band 7 family 27 202 1.3E-29 T 11-10-2018 IPR001107 Band 7 domain APH_1147 d774824b5af4c21d4efe9e032748cbca 291 Gene3D G3DSA:3.30.479.30 52 187 6.7E-20 T 11-10-2018 APH_1147 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 78 99 1.5E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 APH_1147 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 180 201 1.5E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 APH_1147 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 161 179 1.5E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 APH_1147 d774824b5af4c21d4efe9e032748cbca 291 PRINTS PR00721 Stomatin signature 30 52 1.5E-8 T 11-10-2018 IPR001972 Stomatin family GO:0016020 APH_0053 33ac532af12c71a454b2b05f5b969081 427 Gene3D G3DSA:1.20.1250.20 7 423 6.0E-52 T 11-10-2018 APH_0053 33ac532af12c71a454b2b05f5b969081 427 SUPERFAMILY SSF103473 7 414 7.59E-54 T 11-10-2018 IPR036259 MFS transporter superfamily APH_0053 33ac532af12c71a454b2b05f5b969081 427 Pfam PF00083 Sugar (and other) transporter 11 215 1.2E-19 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APH_0521 ec36fed4e3ef38dd6f2612f049ca912e 188 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 80 138 5.0E-23 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0521 ec36fed4e3ef38dd6f2612f049ca912e 188 SUPERFAMILY SSF143243 23 184 1.31E-51 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0521 ec36fed4e3ef38dd6f2612f049ca912e 188 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 152 7.8E-40 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0521 ec36fed4e3ef38dd6f2612f049ca912e 188 Gene3D G3DSA:3.30.460.80 5 131 9.0E-34 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0521 ec36fed4e3ef38dd6f2612f049ca912e 188 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 112 133 - T 11-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0521 ec36fed4e3ef38dd6f2612f049ca912e 188 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 159 27.741 T 11-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1241 5af69c7563f68ac0219d58bac2752701 226 Pfam PF01617 Surface antigen 139 219 1.1E-19 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0401 4ab4691516fe6f613ab844fe455e0bfd 189 Pfam PF00355 Rieske [2Fe-2S] domain 66 169 4.1E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APH_0401 4ab4691516fe6f613ab844fe455e0bfd 189 Gene3D G3DSA:2.102.10.10 51 183 5.1E-52 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 APH_0401 4ab4691516fe6f613ab844fe455e0bfd 189 SUPERFAMILY SSF50022 39 183 1.7E-40 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 APH_0401 4ab4691516fe6f613ab844fe455e0bfd 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 3.9E-16 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APH_0401 4ab4691516fe6f613ab844fe455e0bfd 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 3.9E-16 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APH_0401 4ab4691516fe6f613ab844fe455e0bfd 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 143 155 3.9E-16 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 APH_0513 b245e9451e01cda332f8dc3939b61b98 227 SUPERFAMILY SSF160443 127 213 3.01E-15 T 11-10-2018 IPR036063 Smr domain superfamily APH_0513 b245e9451e01cda332f8dc3939b61b98 227 Pfam PF01713 Smr domain 130 213 2.8E-17 T 11-10-2018 IPR002625 Smr domain APH_0513 b245e9451e01cda332f8dc3939b61b98 227 Gene3D G3DSA:3.30.1370.110 85 218 8.8E-29 T 11-10-2018 APH_0211 3a76946f1d0dc6398b650d9f1c49697f 104 SUPERFAMILY SSF109736 18 61 2.88E-14 T 11-10-2018 APH_0606 c5ee9c70e720ae854e53f3398a5adc21 236 SUPERFAMILY SSF53335 12 234 1.98E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0606 c5ee9c70e720ae854e53f3398a5adc21 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 235 36.44 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 APH_0606 c5ee9c70e720ae854e53f3398a5adc21 236 Pfam PF13489 Methyltransferase domain 38 181 1.4E-22 T 11-10-2018 APH_0606 c5ee9c70e720ae854e53f3398a5adc21 236 Gene3D G3DSA:3.40.50.150 8 235 8.4E-67 T 11-10-2018 APH_0140 2c42d245c0739f4143b820f76147618f 78 SUPERFAMILY SSF82657 6 72 4.19E-18 T 11-10-2018 IPR036065 BolA-like superfamily APH_0140 2c42d245c0739f4143b820f76147618f 78 Pfam PF01722 BolA-like protein 29 71 4.0E-13 T 11-10-2018 IPR002634 BolA protein APH_0140 2c42d245c0739f4143b820f76147618f 78 PIRSF PIRSF003113 3 78 2.0E-17 T 11-10-2018 IPR002634 BolA protein APH_0140 2c42d245c0739f4143b820f76147618f 78 Gene3D G3DSA:3.30.300.90 5 73 2.4E-25 T 11-10-2018 APH_0195 d602d20d9231bb166395450ffa925a98 258 Pfam PF03799 Cell division protein FtsQ 139 250 3.6E-8 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB APH_0195 d602d20d9231bb166395450ffa925a98 258 Pfam PF08478 POTRA domain, FtsQ-type 68 135 5.3E-8 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type APH_0309 223b2f450697cbd49fd1f37d7f08a261 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.695 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0309 223b2f450697cbd49fd1f37d7f08a261 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 3.0E-13 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0309 223b2f450697cbd49fd1f37d7f08a261 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APH_0309 223b2f450697cbd49fd1f37d7f08a261 44 Pfam PF00468 Ribosomal protein L34 1 43 1.2E-21 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1051 cea5918c120c293b7610cc2dae061860 91 Pfam PF01165 Ribosomal protein S21 3 54 1.2E-9 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1051 cea5918c120c293b7610cc2dae061860 91 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 12.33 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_1180 663947a8e5b55935cfb46434dd7e095b 447 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 301 20.342 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APH_1180 663947a8e5b55935cfb46434dd7e095b 447 Pfam PF01171 PP-loop family 10 189 1.2E-53 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 APH_1180 663947a8e5b55935cfb46434dd7e095b 447 Gene3D G3DSA:3.40.50.620 2 218 2.0E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_1180 663947a8e5b55935cfb46434dd7e095b 447 SUPERFAMILY SSF52402 3 192 8.16E-50 T 11-10-2018 APH_0539 a0e3616c794acc4ee8228ab4b11e1af1 152 Gene3D G3DSA:3.40.50.960 2 152 6.2E-39 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_0539 a0e3616c794acc4ee8228ab4b11e1af1 152 SUPERFAMILY SSF52121 5 150 4.84E-37 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_0539 a0e3616c794acc4ee8228ab4b11e1af1 152 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 4 150 21.156 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_0539 a0e3616c794acc4ee8228ab4b11e1af1 152 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 9 147 1.5E-35 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 APH_1115 ff5a5f124e482ba9eca117f505b8fb08 98 Pfam PF01617 Surface antigen 38 93 1.2E-14 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0077 4d467208825ff8750a914c17bf9dd327 307 Pfam PF03547 Membrane transport protein 6 124 2.1E-6 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 APH_1058 a886ad81a0552d9f35303d664b8cf903 75 Gene3D G3DSA:3.30.420.40 16 53 2.7E-8 T 11-10-2018 APH_1095 a886ad81a0552d9f35303d664b8cf903 75 Gene3D G3DSA:3.30.420.40 16 53 2.7E-8 T 11-10-2018 APH_0039 0a73f2ad3e98f24eaf01d54c8187b84c 107 Pfam PF03840 Preprotein translocase SecG subunit 7 75 2.4E-15 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_0039 0a73f2ad3e98f24eaf01d54c8187b84c 107 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 7.9E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_0039 0a73f2ad3e98f24eaf01d54c8187b84c 107 PRINTS PR01651 Protein-export SecG membrane protein signature 58 80 7.9E-10 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APH_0419 2b6aa6364d3e1cba7f940fb7598be2a1 277 Gene3D G3DSA:3.40.50.300 51 239 3.3E-21 T 11-10-2018 APH_0419 2b6aa6364d3e1cba7f940fb7598be2a1 277 SUPERFAMILY SSF52540 11 230 2.27E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0993 dd9373a4423122843b0bbc1af930b906 265 Gene3D G3DSA:3.40.1190.20 3 262 9.2E-82 T 11-10-2018 IPR029056 Ribokinase-like APH_0993 dd9373a4423122843b0bbc1af930b906 265 Pfam PF08543 Phosphomethylpyrimidine kinase 13 254 6.9E-76 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 APH_0993 dd9373a4423122843b0bbc1af930b906 265 SUPERFAMILY SSF53613 4 260 3.44E-64 T 11-10-2018 IPR029056 Ribokinase-like APH_0218 7c76682e401ecf6efd745b480611c4df 322 SMART SM00729 42 254 5.7E-38 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 APH_0218 7c76682e401ecf6efd745b480611c4df 322 SUPERFAMILY SSF102114 4 309 1.31E-86 T 11-10-2018 APH_0218 7c76682e401ecf6efd745b480611c4df 322 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 219 309 3.4E-18 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APH_0218 7c76682e401ecf6efd745b480611c4df 322 Gene3D G3DSA:3.20.20.70 3 313 2.9E-122 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0218 7c76682e401ecf6efd745b480611c4df 322 PIRSF PIRSF001619 1 317 3.0E-127 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APH_0218 7c76682e401ecf6efd745b480611c4df 322 Hamap MF_01694 Biotin synthase [bioB]. 4 312 41.848 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APH_0218 7c76682e401ecf6efd745b480611c4df 322 SMART SM00876 219 311 2.5E-39 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 APH_0218 7c76682e401ecf6efd745b480611c4df 322 Pfam PF04055 Radical SAM superfamily 50 206 8.8E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 APH_1331 0d3768702f1cd5945dee77587ff7668f 149 Pfam PF01668 SmpB protein 4 147 8.8E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 APH_1331 0d3768702f1cd5945dee77587ff7668f 149 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 62.577 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 APH_1331 0d3768702f1cd5945dee77587ff7668f 149 Gene3D G3DSA:2.40.280.10 1 125 9.7E-44 T 11-10-2018 IPR023620 Small protein B APH_1331 0d3768702f1cd5945dee77587ff7668f 149 SUPERFAMILY SSF74982 2 128 2.09E-44 T 11-10-2018 IPR023620 Small protein B APH_1331 0d3768702f1cd5945dee77587ff7668f 149 ProSitePatterns PS01317 SsrA-binding protein. 22 34 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site APH_1331 0d3768702f1cd5945dee77587ff7668f 149 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 128 1.0E-44 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 APH_0094 4290328aa84c57ab87b1b07255e66579 391 Pfam PF07690 Major Facilitator Superfamily 5 329 2.0E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APH_0094 4290328aa84c57ab87b1b07255e66579 391 Gene3D G3DSA:1.20.1250.20 181 391 4.3E-12 T 11-10-2018 APH_0094 4290328aa84c57ab87b1b07255e66579 391 Gene3D G3DSA:1.20.1250.20 1 177 6.4E-20 T 11-10-2018 APH_0094 4290328aa84c57ab87b1b07255e66579 391 SUPERFAMILY SSF103473 2 387 3.4E-39 T 11-10-2018 IPR036259 MFS transporter superfamily APH_1256 ccac39e52bd4bdf2ac345df8a6ce7c17 395 Gene3D G3DSA:2.40.160.20 209 393 1.1E-9 T 11-10-2018 APH_1256 ccac39e52bd4bdf2ac345df8a6ce7c17 395 Pfam PF01617 Surface antigen 39 388 1.5E-70 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1256 ccac39e52bd4bdf2ac345df8a6ce7c17 395 SUPERFAMILY SSF56925 39 386 3.14E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1081 57354c40411e21c2554cc06a58f6bbd1 274 SUPERFAMILY SSF56925 183 262 1.57E-12 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1081 57354c40411e21c2554cc06a58f6bbd1 274 Gene3D G3DSA:2.40.160.20 73 266 8.7E-10 T 11-10-2018 APH_1081 57354c40411e21c2554cc06a58f6bbd1 274 Pfam PF01617 Surface antigen 154 271 2.6E-41 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0561 ac164924a9f291a3b2c8184063b98fb3 210 Gene3D G3DSA:3.40.30.10 33 210 6.3E-23 T 11-10-2018 APH_0561 ac164924a9f291a3b2c8184063b98fb3 210 Pfam PF00578 AhpC/TSA family 70 184 9.5E-7 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0561 ac164924a9f291a3b2c8184063b98fb3 210 SUPERFAMILY SSF52833 20 200 2.27E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1343 29d517ae90b3ffe59b9561c8a6681598 222 Pfam PF01617 Surface antigen 156 213 4.6E-10 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0325 7977b769c07f3e8d48bc4f21e7631a1d 352 Gene3D G3DSA:3.30.9.10 89 300 1.2E-39 T 11-10-2018 APH_0325 7977b769c07f3e8d48bc4f21e7631a1d 352 Gene3D G3DSA:3.50.50.60 7 332 1.2E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0325 7977b769c07f3e8d48bc4f21e7631a1d 352 SUPERFAMILY SSF51905 7 296 3.04E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily APH_0325 7977b769c07f3e8d48bc4f21e7631a1d 352 Pfam PF01266 FAD dependent oxidoreductase 7 330 7.3E-26 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APH_0232 d16e2a3bd540ab2adfc3a82cc236e89b 211 Gene3D G3DSA:2.60.130.10 30 211 2.2E-26 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APH_0232 d16e2a3bd540ab2adfc3a82cc236e89b 211 Pfam PF00775 Dioxygenase 64 134 7.5E-11 T 11-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 APH_0232 d16e2a3bd540ab2adfc3a82cc236e89b 211 SUPERFAMILY SSF49482 14 210 7.33E-36 T 11-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APH_0600 f403b73aed32482d5abf07bcd421f3e0 557 Gene3D G3DSA:3.20.20.540 176 489 4.4E-149 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APH_0600 f403b73aed32482d5abf07bcd421f3e0 557 Pfam PF01964 Radical SAM ThiC family 113 553 9.0E-194 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APH_0600 f403b73aed32482d5abf07bcd421f3e0 557 Pfam PF13667 ThiC-associated domain 9 77 2.7E-18 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APH_0600 f403b73aed32482d5abf07bcd421f3e0 557 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 112 557 94.757 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 APH_0177 6c30e18ebbc31e71e37377906df69bab 322 Gene3D G3DSA:1.10.287.700 152 260 5.1E-8 T 11-10-2018 APH_1163 6ebb7c55a2f93dbc6d17f4cde2fffc26 339 Pfam PF01617 Surface antigen 51 165 1.2E-30 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0848 16024609b5b9158a15095a3b1af01440 425 SUPERFAMILY SSF103473 15 416 8.24E-34 T 11-10-2018 IPR036259 MFS transporter superfamily APH_0848 16024609b5b9158a15095a3b1af01440 425 Gene3D G3DSA:1.20.1250.20 14 416 1.2E-35 T 11-10-2018 APH_0848 16024609b5b9158a15095a3b1af01440 425 Pfam PF00083 Sugar (and other) transporter 17 223 2.7E-14 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APH_0029 d4ca068d7ed1514e916c1ed851877194 223 Pfam PF01617 Surface antigen 156 205 8.3E-7 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1299 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 201 1.2E-15 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 APH_1299 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 SUPERFAMILY SSF51735 1 254 2.98E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily APH_1299 b9c5c9a1be73d3df2416bcb99e9b1ac5 313 Gene3D G3DSA:3.40.50.720 2 256 5.2E-43 T 11-10-2018 APH_1322 92cc2c43869cdc518735304ba30e6517 398 Pfam PF02601 Exonuclease VII, large subunit 128 326 2.3E-70 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APH_1322 92cc2c43869cdc518735304ba30e6517 398 Pfam PF02601 Exonuclease VII, large subunit 323 393 6.6E-10 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APH_1322 92cc2c43869cdc518735304ba30e6517 398 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 398 23.373 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APH_1322 92cc2c43869cdc518735304ba30e6517 398 Pfam PF13742 OB-fold nucleic acid binding domain 16 104 5.9E-22 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APH_0103 8b8bb4a3f53119fd28f360b485a3cafb 458 Gene3D G3DSA:3.20.20.70 6 458 2.8E-24 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_0103 8b8bb4a3f53119fd28f360b485a3cafb 458 SUPERFAMILY SSF51412 91 315 8.7E-7 T 11-10-2018 APH_0103 8b8bb4a3f53119fd28f360b485a3cafb 458 Pfam PF03060 Nitronate monooxygenase 122 337 5.2E-8 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APH_1280 0e8d14b1e5015869c546513dc995196e 182 SUPERFAMILY SSF52833 10 158 1.1E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily APH_1280 0e8d14b1e5015869c546513dc995196e 182 Gene3D G3DSA:3.40.30.10 37 174 3.1E-10 T 11-10-2018 APH_1280 0e8d14b1e5015869c546513dc995196e 182 Pfam PF00578 AhpC/TSA family 53 134 8.1E-6 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 PIRSF PIRSF005303 1 316 5.1E-82 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 299 1.1E-7 T 11-10-2018 IPR010918 PurM-like, C-terminal domain APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 316 25.953 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 SUPERFAMILY SSF56042 140 302 2.69E-34 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 Gene3D G3DSA:3.30.1330.10 1 136 2.3E-31 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 Gene3D G3DSA:3.90.650.10 142 316 2.9E-48 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 SUPERFAMILY SSF55326 2 135 1.33E-26 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily APH_0735 2b15c5100818197c9f85de0b8d94ec8d 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 24 135 7.8E-19 T 11-10-2018 IPR016188 PurM-like, N-terminal domain APH_1220 c4fcf661fd9327a741c2110a37beee1d 274 SUPERFAMILY SSF56925 26 274 2.43E-10 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1220 c4fcf661fd9327a741c2110a37beee1d 274 Gene3D G3DSA:2.40.160.20 69 251 2.8E-7 T 11-10-2018 APH_1220 c4fcf661fd9327a741c2110a37beee1d 274 Pfam PF01617 Surface antigen 27 274 7.0E-11 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0285 ebba153262e21c6c7457993230947046 112 Pfam PF00237 Ribosomal protein L22p/L17e 8 108 2.8E-29 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APH_0285 ebba153262e21c6c7457993230947046 112 SUPERFAMILY SSF54843 4 111 2.75E-34 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0285 ebba153262e21c6c7457993230947046 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 23.112 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0285 ebba153262e21c6c7457993230947046 112 Gene3D G3DSA:3.90.470.10 2 112 1.6E-35 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 APH_0342 675c3d3fe10e9d5a9f149630ab96947a 103 Pfam PF03334 Na+/H+ antiporter subunit 11 88 2.5E-19 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 APH_0564 c359897503406a9f9dd88608ad1dc006 57 Gene3D G3DSA:3.40.50.620 2 50 1.5E-8 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0337 0af30f31862a9e4b88153fbbee624f11 191 Gene3D G3DSA:3.40.50.300 1 47 1.0E-8 T 11-10-2018 APH_1390 7b50f30c27981a3a65fc81c3c268c44f 259 Pfam PF01617 Surface antigen 170 257 3.2E-20 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1307 76c2e70b555411424761b0d72a53ad5a 147 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 146 4.4E-47 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 APH_1307 76c2e70b555411424761b0d72a53ad5a 147 PIRSF PIRSF004638 1 147 8.7E-43 T 11-10-2018 IPR005265 Uncharacterised protein family UPF0093 APH_1182 e00211c561aa6df914f9fa6ad4cd5a81 486 Pfam PF02386 Cation transport protein 69 468 3.4E-36 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APH_0861 0cdae82fde5b11f6c5e188d4daaf7d22 443 Pfam PF05065 Phage capsid family 115 388 2.0E-71 T 11-10-2018 IPR024455 Phage capsid APH_0861 0cdae82fde5b11f6c5e188d4daaf7d22 443 SUPERFAMILY SSF56563 109 390 9.68E-61 T 11-10-2018 APH_0782 16f1d5be7d14d0c33e22850edf56236a 200 SUPERFAMILY SSF55821 2 184 9.46E-47 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily APH_0782 16f1d5be7d14d0c33e22850edf56236a 200 Pfam PF01300 Telomere recombination 8 180 4.7E-44 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 APH_0782 16f1d5be7d14d0c33e22850edf56236a 200 Gene3D G3DSA:3.90.870.10 1 193 5.9E-48 T 11-10-2018 APH_0203 a930f3704174351b05aa14c2754ee45e 206 Pfam PF10090 Histidine phosphotransferase C-terminal domain 74 197 1.0E-24 T 11-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal APH_0203 a930f3704174351b05aa14c2754ee45e 206 Gene3D G3DSA:3.30.565.10 75 204 1.0E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily APH_0624 ee47e984f3227b07990a42bcd54d7c80 268 SUPERFAMILY SSF51351 30 266 4.84E-63 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_0624 ee47e984f3227b07990a42bcd54d7c80 268 Pfam PF00121 Triosephosphate isomerase 32 260 5.4E-53 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 APH_0624 ee47e984f3227b07990a42bcd54d7c80 268 Gene3D G3DSA:3.20.20.70 22 268 4.6E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_1226 975e0f0cefac761db4e80742baff0a75 263 Pfam PF01617 Surface antigen 167 261 2.5E-28 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1226 975e0f0cefac761db4e80742baff0a75 263 Gene3D G3DSA:2.40.160.20 91 261 5.9E-6 T 11-10-2018 APH_1226 975e0f0cefac761db4e80742baff0a75 263 SUPERFAMILY SSF56925 194 256 4.71E-7 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0266 ea5508d59cca4bdb7d6bc11684eda3c2 122 SUPERFAMILY SSF102829 5 85 3.79E-9 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily APH_0266 ea5508d59cca4bdb7d6bc11684eda3c2 122 Pfam PF05164 Cell division protein ZapA 5 92 6.1E-10 T 11-10-2018 IPR007838 Cell division protein ZapA-like APH_1345 0f9283adecdbe662f47c960443e082c5 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 229 3.3E-50 T 11-10-2018 IPR006214 Bax inhibitor 1-related APH_0144 a59a682fc8fa264c14122da848bb38a1 67 Pfam PF01617 Surface antigen 1 67 1.5E-19 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1113 27f0219266d5c908e232d12298c209c0 106 Gene3D G3DSA:1.10.20.60 9 104 2.3E-20 T 11-10-2018 APH_1113 27f0219266d5c908e232d12298c209c0 106 SUPERFAMILY SSF141000 12 104 6.67E-23 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 APH_1113 27f0219266d5c908e232d12298c209c0 106 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 12 106 19.977 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APH_1113 27f0219266d5c908e232d12298c209c0 106 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 30 101 1.2E-17 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 APH_1125 476bd90c8850c225ad18c1ff0c875103 95 Pfam PF01617 Surface antigen 7 87 2.7E-26 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1125 476bd90c8850c225ad18c1ff0c875103 95 SUPERFAMILY SSF56925 10 87 1.96E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1350 0e6f1a95e3e6c463c95744ac952ff879 322 Pfam PF01617 Surface antigen 5 307 1.5E-40 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1350 0e6f1a95e3e6c463c95744ac952ff879 322 SUPERFAMILY SSF56925 45 304 5.76E-6 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0078 54b33df0aab5cc44244b55828e95fcd2 102 Pfam PF04800 ETC complex I subunit conserved region 8 100 2.3E-27 T 11-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 APH_0078 54b33df0aab5cc44244b55828e95fcd2 102 Gene3D G3DSA:3.30.160.190 6 80 6.6E-25 T 11-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_1018 2430dbc0790dc7a3f83f1c7e43ccad70 250 Pfam PF01617 Surface antigen 165 238 1.2E-18 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 Gene3D G3DSA:3.40.50.620 1 167 9.3E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 SUPERFAMILY SSF52374 4 160 1.05E-38 T 11-10-2018 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 Pfam PF01467 Cytidylyltransferase-like 7 138 6.9E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.2E-34 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.2E-34 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.2E-34 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.2E-34 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APH_0650 585d3c933ca9b31e4cc74dfa7165cb85 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 163 32.208 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 APH_0315 9287fff4c81bdd976b24e1ece5c720df 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 19.352 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0315 9287fff4c81bdd976b24e1ece5c720df 58 SUPERFAMILY SSF57829 2 54 1.22E-20 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 APH_0315 9287fff4c81bdd976b24e1ece5c720df 58 Pfam PF01783 Ribosomal L32p protein family 2 55 4.4E-24 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 APH_0147 ff5fb305132e2b51e543046e70f41836 95 SUPERFAMILY SSF52540 4 80 1.74E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_0147 ff5fb305132e2b51e543046e70f41836 95 Pfam PF00625 Guanylate kinase 4 72 2.6E-12 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APH_0147 ff5fb305132e2b51e543046e70f41836 95 Gene3D G3DSA:3.40.50.300 1 95 2.9E-29 T 11-10-2018 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 35 52 9.8E-43 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 194 218 9.8E-43 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 146 172 9.8E-43 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 111 131 9.8E-43 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 52 72 9.8E-43 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 90 110 9.8E-43 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 APH_0168 bc9f51e62f8980b9339da514a9ffdd7e 235 Pfam PF01578 Cytochrome C assembly protein 16 174 5.9E-27 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APH_0612 c6b0c43bc7a02d5efd17ef69e4327f6b 399 Pfam PF00375 Sodium:dicarboxylate symporter family 12 378 6.0E-27 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 APH_0612 c6b0c43bc7a02d5efd17ef69e4327f6b 399 SUPERFAMILY SSF118215 17 378 8.24E-37 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_0612 c6b0c43bc7a02d5efd17ef69e4327f6b 399 Gene3D G3DSA:1.10.3860.10 4 387 1.1E-19 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 APH_1295 c2ee68434226d5a759be3430afa825fb 99 Pfam PF00510 Cytochrome c oxidase subunit III 12 87 1.0E-13 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1295 c2ee68434226d5a759be3430afa825fb 99 Gene3D G3DSA:1.20.120.80 1 95 2.3E-11 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1295 c2ee68434226d5a759be3430afa825fb 99 SUPERFAMILY SSF81452 4 85 6.8E-13 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_0984 5ef363f77d4ae9a16f05554aacdd39cf 483 Gene3D G3DSA:1.10.510.10 239 369 1.6E-7 T 11-10-2018 APH_0984 5ef363f77d4ae9a16f05554aacdd39cf 483 SUPERFAMILY SSF56112 81 409 1.33E-31 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily APH_0984 5ef363f77d4ae9a16f05554aacdd39cf 483 Pfam PF03109 ABC1 family 98 215 4.6E-31 T 11-10-2018 IPR004147 UbiB domain APH_1401 653b208a391dc448e815bbef5564c55f 256 Pfam PF01617 Surface antigen 7 255 4.3E-21 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1249 4f3a967aa893d167a3565342c4b95398 391 SUPERFAMILY SSF56925 27 381 4.19E-13 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_1249 4f3a967aa893d167a3565342c4b95398 391 Pfam PF01617 Surface antigen 27 389 7.3E-71 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1249 4f3a967aa893d167a3565342c4b95398 391 Gene3D G3DSA:2.40.160.20 203 385 1.0E-8 T 11-10-2018 APH_0226 2fe36e5b3247e924125c0b336ea5b58c 56 Pfam PF01617 Surface antigen 21 48 3.3E-6 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1337 b92095c3ec9799fe5c2f336199bda791 86 Pfam PF07330 Protein of unknown function (DUF1467) 3 74 1.1E-14 T 11-10-2018 IPR009935 Protein of unknown function DUF1467 APH_1193 0c601692c77d382cf8b6f60390a5475f 417 Pfam PF13685 Iron-containing alcohol dehydrogenase 31 281 6.6E-52 T 11-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 APH_1193 0c601692c77d382cf8b6f60390a5475f 417 SUPERFAMILY SSF56796 23 335 8.64E-51 T 11-10-2018 APH_1193 0c601692c77d382cf8b6f60390a5475f 417 Gene3D G3DSA:3.40.50.1970 20 167 1.2E-30 T 11-10-2018 APH_0404 99bd39412793e92567eb59cb8c173a79 574 Pfam PF13609 Gram-negative porin 107 481 2.7E-6 T 11-10-2018 APH_0267 b71639167db524b6f8a042c0c0543e11 96 Pfam PF13747 Domain of unknown function (DUF4164) 3 92 1.0E-11 T 11-10-2018 IPR025310 Protein of unknown function DUF4164 APH_1212 acd002cfeae127cfb0c9f3dc00c902f2 88 Pfam PF03937 Flavinator of succinate dehydrogenase 10 81 1.9E-21 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase APH_1212 acd002cfeae127cfb0c9f3dc00c902f2 88 Gene3D G3DSA:1.10.150.250 5 88 8.3E-21 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily APH_1212 acd002cfeae127cfb0c9f3dc00c902f2 88 SUPERFAMILY SSF109910 6 82 8.76E-22 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily APH_1202 6e009b4b671b8a8dc32462a503e9d04e 232 Pfam PF01617 Surface antigen 151 229 5.6E-21 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0062 b6d67ed2d6ebe4a969aa088968c8d87e 188 Pfam PF06242 Protein of unknown function (DUF1013) 29 167 1.7E-58 T 11-10-2018 IPR010421 Protein of unknown function DUF1013 APH_0375 6ecf959be3026459cba60a7a074ce92c 928 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 562 756 1.6E-16 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_0113 8cc5400ea4ee22e7a0d2ef9c9144cbd6 235 Pfam PF01148 Cytidylyltransferase family 62 229 4.4E-46 T 11-10-2018 APH_0003 4f25cd6cf7aa984013fd9b1b4f3ab06e 244 Pfam PF02405 Permease MlaE 32 241 5.8E-68 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 APH_1269 fe94461bc76f8741bf427afbc70d39b7 429 Gene3D G3DSA:2.40.160.20 217 381 2.4E-9 T 11-10-2018 APH_1269 fe94461bc76f8741bf427afbc70d39b7 429 Pfam PF01617 Surface antigen 27 403 1.3E-75 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1269 fe94461bc76f8741bf427afbc70d39b7 429 SUPERFAMILY SSF56925 27 377 9.16E-15 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel APH_0025 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 Gene3D G3DSA:3.40.50.150 2 200 5.5E-25 T 11-10-2018 APH_0025 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 Pfam PF08241 Methyltransferase domain 48 137 1.9E-15 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 APH_0025 8b3e9fc28c5d5ca122b201f6f6d81eb8 252 SUPERFAMILY SSF53335 14 187 1.46E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APH_0327 8d3a8941973dbddc4b222ea407c748cc 115 Gene3D G3DSA:1.10.1370.30 1 52 7.1E-7 T 11-10-2018 APH_0172 2d7ee04d234a905b67882f1b10fbc482 67 Pfam PF01617 Surface antigen 1 67 1.2E-19 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1118 2782d927128c4a776c4faede9929dc60 316 Pfam PF01617 Surface antigen 27 315 1.0E-38 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1015 acc83b228542ca052d4fc3a1f44ca024 166 Pfam PF01899 Na+/H+ ion antiporter subunit 9 146 9.7E-19 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 APH_1339 73e175b6d244da756b99208e37f3a8ae 412 SUPERFAMILY SSF48452 115 343 4.56E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_1339 73e175b6d244da756b99208e37f3a8ae 412 Gene3D G3DSA:1.25.40.10 99 377 5.3E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 APH_0648 22c829d1eeb7279d15ef76aeb327ce8b 336 SUPERFAMILY SSF52317 83 295 2.04E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_0648 22c829d1eeb7279d15ef76aeb327ce8b 336 Gene3D G3DSA:3.40.50.880 89 307 1.3E-16 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like APH_1129 969e62e6aa4308b32290dbd897a95152 777 SUPERFAMILY SSF52540 408 728 3.72E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase APH_1129 969e62e6aa4308b32290dbd897a95152 777 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 189 376 3.1E-14 T 11-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 APH_0687 9c670e64f12069a97c94373d2f5d924b 135 Pfam PF03918 Cytochrome C biogenesis protein 17 131 4.8E-26 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family APH_0687 9c670e64f12069a97c94373d2f5d924b 135 Gene3D G3DSA:1.10.8.640 20 102 1.5E-19 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily APH_1144 e719eadd4f019df8a42be31ca544cc82 123 Pfam PF04956 TrbC/VIRB2 family 5 95 6.9E-17 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_0181 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 433 452 2.1E-16 T 11-10-2018 APH_0181 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 2.1E-16 T 11-10-2018 APH_0181 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 224 245 2.1E-16 T 11-10-2018 APH_0181 06ac45f71eafdf24a00339909b3a079b 500 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 246 272 2.1E-16 T 11-10-2018 APH_0181 06ac45f71eafdf24a00339909b3a079b 500 Pfam PF00361 Proton-conducting membrane transporter 136 437 1.5E-52 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0492 d9a2b37ee1731ec3303971d4870fa7e4 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 APH_0492 d9a2b37ee1731ec3303971d4870fa7e4 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 201 4.9E-54 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 APH_0492 d9a2b37ee1731ec3303971d4870fa7e4 218 SUPERFAMILY SSF51569 1 211 3.35E-72 T 11-10-2018 APH_0492 d9a2b37ee1731ec3303971d4870fa7e4 218 Gene3D G3DSA:3.20.20.70 1 216 6.5E-82 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 APH_1313 dbe3b652c64e80107bfba9e93c9bd51e 273 Pfam PF01617 Surface antigen 3 264 3.3E-25 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0374 867552284eed534246dda6d4f5580866 846 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 556 663 3.9E-10 T 11-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 APH_0634 a713b82f068cd424a5350067881bfe0d 185 Pfam PF05135 Phage gp6-like head-tail connector protein 20 126 3.5E-16 T 11-10-2018 IPR021146 Phage gp6-like head-tail connector protein APH_0542 af035869cb364c3dccb42221283eefc0 103 Pfam PF00384 Molybdopterin oxidoreductase 1 70 7.4E-8 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 APH_0542 af035869cb364c3dccb42221283eefc0 103 SUPERFAMILY SSF53706 1 83 1.52E-6 T 11-10-2018 APH_0696 8e593cc5318d003ecfb68d59e3f0844d 104 Gene3D G3DSA:3.20.20.80 1 68 8.0E-7 T 11-10-2018 APH_0023 0437d807966def39fcee253b4474dba6 375 Pfam PF04860 Phage portal protein 28 361 2.7E-85 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein APH_1176 0cd37f58aaf1455f7afbebcf625125dc 359 Pfam PF01617 Surface antigen 27 141 1.3E-30 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1230 0075c3f8bb243400955ff13abd5c3bf3 83 Pfam PF01617 Surface antigen 11 83 1.2E-22 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0956 88cb7a0acc0123ea7a75621fe299ac92 92 Pfam PF02325 YGGT family 10 85 2.2E-12 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 APH_1242 0e19b6d332d775982bf7b1ce33d41b71 331 Pfam PF01617 Surface antigen 41 328 7.4E-33 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1131 42f845eb06c945f5adf8491180c7e43e 119 Pfam PF04956 TrbC/VIRB2 family 3 99 1.3E-16 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_1133 4c9a1bf320521fd7b1fb9ed54122ee36 119 Pfam PF04956 TrbC/VIRB2 family 3 100 3.6E-17 T 11-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 APH_1399 26565e6582fada3a8b6bcc1af291f7b6 38 Pfam PF01617 Surface antigen 2 32 2.8E-12 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0110 6dca26a6a14df811afa480df3035ebd4 999 Pfam PF13116 Protein of unknown function 337 495 8.7E-7 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 APH_0110 6dca26a6a14df811afa480df3035ebd4 999 Pfam PF13502 AsmA-like C-terminal region 824 955 7.5E-11 T 11-10-2018 IPR032712 AsmA-like, C-terminal APH_1408 8f068868bc184891734b34aeb90d2ec5 286 Pfam PF01617 Surface antigen 5 98 1.7E-21 T 11-10-2018 IPR002566 Surface antigen msp4 APH_1190 836f5429b846dded2a7eafb63b8b6a45 167 Pfam PF02326 Plant ATP synthase F0 5 45 7.9E-7 T 11-10-2018 IPR003319 ATP synthase YMF19-like, N-terminal APH_1335 e0fe3e962d7daab40c6808c7d7ac63be 180 Pfam PF00213 ATP synthase delta (OSCP) subunit 8 171 7.5E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1335 e0fe3e962d7daab40c6808c7d7ac63be 180 SUPERFAMILY SSF47928 8 100 3.27E-10 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1335 e0fe3e962d7daab40c6808c7d7ac63be 180 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 175 13.127 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 APH_1253 c64fafc3d4e59fd068559f44ae91c897 267 Pfam PF01617 Surface antigen 153 234 3.9E-19 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0341 b7fb98aa7d8cabeff326c00ac2a2271a 85 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 79 2.4E-12 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 APH_0220 f977f149a90e0866ccb1cf46dc9477f0 151 Pfam PF07310 PAS domain 10 145 1.7E-16 T 11-10-2018 IPR009922 Protein of unknown function DUF1457 APH_0150 4dd72c1b0b2b18d28dd342da3be3921d 199 Pfam PF02674 Colicin V production protein 3 153 3.1E-27 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APH_0378 e4c07ff485c3e03a4a62a2dc5f368cc6 202 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 5 200 1.1E-67 T 11-10-2018 IPR011740 Protein of unknown function DUF2460 APH_1341 224e6dca7e276a41a615a25fb7e86fff 399 Pfam PF02687 FtsX-like permease family 285 392 1.7E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 APH_1341 224e6dca7e276a41a615a25fb7e86fff 399 Pfam PF12704 MacB-like periplasmic core domain 25 228 4.2E-16 T 11-10-2018 IPR025857 MacB-like periplasmic core domain APH_1043 965976faceb24837d357326b5a07dc17 509 Pfam PF13437 HlyD family secretion protein 345 420 3.3E-7 T 11-10-2018 APH_1043 965976faceb24837d357326b5a07dc17 509 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 125 145 6.1E-32 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_1043 965976faceb24837d357326b5a07dc17 509 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 358 379 6.1E-32 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_1043 965976faceb24837d357326b5a07dc17 509 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 83 106 6.1E-32 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_1043 965976faceb24837d357326b5a07dc17 509 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 473 488 6.1E-32 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_1043 965976faceb24837d357326b5a07dc17 509 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 488 508 6.1E-32 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APH_0617 158a5ee2e49301deabeb27aab1b0bb38 108 Pfam PF05258 Protein of unknown function (DUF721) 13 106 2.0E-16 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 APH_0091 12d1d775f1d4781158b82c1f2a17997a 204 Pfam PF04860 Phage portal protein 52 203 5.4E-29 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein APH_1171 309d5f0cae094abb6cb6d77d47e1cfe6 225 Pfam PF02104 SURF1 family 15 200 3.1E-28 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 APH_1273 5b43f213da5f79aad05129360243d2f3 34 Pfam PF01617 Surface antigen 1 32 8.1E-10 T 11-10-2018 IPR002566 Surface antigen msp4 APH_0449 7640a9f1df20ecef7875f5d317121c5c 236 Pfam PF03741 Integral membrane protein TerC family 12 199 4.0E-40 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 APH_0344 858a2aef57af521ea0f073497dc34e01 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 99 1.8E-17 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like