P029_00005 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs P029_00005 SM00475 5'-3' exonuclease P029_00005 SM00482 DNA polymerase A domain P029_00020 SM00382 ATPases associated with a variety of cellular activities P029_00070 SM00271 DnaJ molecular chaperone homology domain P029_00080 SM01207 P029_00080 P029_00100 SM01091 Transporter associated domain P029_00180 SM00382 ATPases associated with a variety of cellular activities P029_00185 SM00919 Malic enzyme, NAD binding domain P029_00185 SM01274 P029_00185 P029_00285 SM00357 Cold shock protein domain P029_00285 SM00382 ATPases associated with a variety of cellular activities P029_00285 SM00959 Rho termination factor, N-terminal domain P029_00300 SM00271 DnaJ molecular chaperone homology domain P029_00305 SM00932 Scaffold protein Nfu/NifU N terminal P029_00405 SM01240 P029_00405 P029_00415 SM00116 Domain in cystathionine beta-synthase and other proteins. P029_00415 SM01240 P029_00415 P029_00435 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. P029_00450 SM00978 P029_00450 P029_00490 SM00487 DEAD-like helicases superfamily P029_00490 SM00490 helicase superfamily c-terminal domain P029_00490 SM00982 P029_00490 P029_00490 SM01058 CarD-like/TRCF domain P029_00565 SM00382 ATPases associated with a variety of cellular activities P029_00585 SM00357 Cold shock protein domain P029_00590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain P029_00590 SM00387 Histidine kinase-like ATPases P029_00590 SM00388 His Kinase A (phosphoacceptor) domain P029_00595 SM00474 3'-5' exonuclease P029_00600 SM00292 breast cancer carboxy-terminal domain P029_00600 SM00532 Ligase N family P029_00665 SM01219 P029_00665 P029_00670 SM00382 ATPases associated with a variety of cellular activities P029_00720 SM00382 ATPases associated with a variety of cellular activities P029_00735 SM00072 Guanylate kinase homologues. P029_00820 SM00749 bacterial OsmY and nodulation domain P029_00835 SM00382 ATPases associated with a variety of cellular activities P029_00835 SM00448 cheY-homologous receiver domain P029_00915 SM00710 Parallel beta-helix repeats P029_00930 SM00729 Elongator protein 3, MiaB family, Radical SAM P029_00930 SM00876 Biotin and Thiamin Synthesis associated domain P029_00955 SM01228 P029_00955 P029_00960 SM01211 P029_00960 P029_01010 SM00382 ATPases associated with a variety of cellular activities P029_01010 SM01086 C-terminal, D2-small domain, of ClpB protein P029_01030 SM00883 Chaperonin 10 Kd subunit P029_01065 SM00851 MGS-like domain P029_01065 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain P029_01080 SM00382 ATPases associated with a variety of cellular activities P029_01085 SM00829 Enoylreductase P029_01095 SM00248 ankyrin repeats P029_01100 SM00244 prohibitin homologues P029_01160 SM00316 Ribosomal protein S1-like RNA-binding domain P029_01170 SM00967 RNA 2'-O ribose methyltransferase substrate binding P029_01190 SM01403 P029_01190 P029_01210 SM01382 P029_01210 P029_01210 SM01383 P029_01210 P029_01225 SM00322 K homology RNA-binding domain P029_01245 SM01374 P029_01245 P029_01250 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. P029_01310 SM00662 RNA polymerases D P029_01320 SM00873 B3/4 domain P029_01320 SM00874 tRNA synthetase B5 domain P029_01320 SM00896 Ferredoxin-fold anticodon binding domain P029_01345 SM00903 Flavin reductase like domain P029_01350 SM00382 ATPases associated with a variety of cellular activities P029_01435 SM00732 Likely ribonuclease with RNase H fold. P029_01440 SM00788 Adenylosuccinate synthetase P029_01460 SM00861 Transketolase, pyrimidine binding domain P029_01515 SM00382 ATPases associated with a variety of cellular activities P029_01515 SM00962 SRP54-type protein, GTPase domain P029_01515 SM00963 SRP54-type protein, helical bundle domain P029_01550 SM00487 DEAD-like helicases superfamily P029_01550 SM00490 helicase superfamily c-terminal domain P029_01565 SM00878 Biotin carboxylase C-terminal domain P029_01585 SM00729 Elongator protein 3, MiaB family, Radical SAM P029_01610 SM00382 ATPases associated with a variety of cellular activities P029_01655 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain P029_01705 SM00564 beta-propeller repeat P029_01795 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain P029_01795 SM01232 P029_01795 P029_01820 SM00937 P029_01820 P029_01880 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region P029_01935 SM00316 Ribosomal protein S1-like RNA-binding domain P029_01935 SM00322 K homology RNA-binding domain P029_01960 SM00382 ATPases associated with a variety of cellular activities P029_01960 SM01086 C-terminal, D2-small domain, of ClpB protein P029_01965 SM00838 Elongation factor G C-terminus P029_02030 SM00937 P029_02030 P029_02040 SM00845 GatB domain P029_02065 SM00382 ATPases associated with a variety of cellular activities P029_02065 SM00760 Bacterial dnaA protein helix-turn-helix domain P029_02070 SM00937 P029_02070 P029_02130 SM00382 ATPases associated with a variety of cellular activities P029_02140 SM00116 Domain in cystathionine beta-synthase and other proteins. P029_02140 SM00924 MgtE intracellular N domain P029_02210 SM01409 P029_02210 P029_02250 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family P029_02340 SM00841 Elongation factor P, C-terminal P029_02340 SM01185 P029_02340 P029_02350 SM00363 S4 RNA-binding domain P029_02355 SM00267 diguanylate cyclase P029_02355 SM00448 cheY-homologous receiver domain P029_02375 SM00840 P029_02375 P029_02425 SM00400 zinc finger P029_02425 SM00493 P029_02425 P029_02430 SM00534 ATPase domain of DNA mismatch repair MUTS family P029_02460 SM00387 Histidine kinase-like ATPases P029_02460 SM00388 His Kinase A (phosphoacceptor) domain P029_02460 SM00448 cheY-homologous receiver domain P029_02490 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain P029_02490 SM00437 Bacterial DNA topoisomerase I DNA-binding domain P029_02490 SM00493 P029_02490 P029_02590 SM00650 Ribosomal RNA adenine dimethylases P029_02620 SM00905 Dihydroneopterin aldolase P029_02770 SM00822 P029_02770 P029_02870 SM01192 P029_02870 P029_02870 SM01193 P029_02870 P029_02890 SM00836 DALR anticodon binding domain P029_02890 SM01016 Arginyl tRNA synthetase N terminal dom P029_02935 SM00248 ankyrin repeats P029_02945 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region P029_02955 SM00387 Histidine kinase-like ATPases P029_02955 SM00433 TopoisomeraseII P029_03000 SM00479 P029_03000 P029_03045 SM00248 ankyrin repeats P029_03095 SM00382 ATPases associated with a variety of cellular activities P029_03130 SM00838 Elongation factor G C-terminus P029_03140 SM00316 Ribosomal protein S1-like RNA-binding domain P029_03140 SM00322 K homology RNA-binding domain P029_03145 SM01387 P029_03145 P029_03205 SM00382 ATPases associated with a variety of cellular activities P029_03210 SM00411 bacterial (prokaryotic) histone like domain P029_03460 SM01004 Delta-aminolevulinic acid dehydratase P029_03475 SM00533 DNA-binding domain of DNA mismatch repair MUTS family P029_03475 SM00534 ATPase domain of DNA mismatch repair MUTS family P029_03495 SM00861 Transketolase, pyrimidine binding domain P029_03505 SM00998 Adenylosuccinate lyase C-terminus P029_03540 SM00729 Elongator protein 3, MiaB family, Radical SAM P029_03555 SM00278 Helix-hairpin-helix DNA-binding motif class 1 P029_03555 SM00465 GIY-YIG type nucleases (URI domain) P029_03570 SM00387 Histidine kinase-like ATPases P029_03590 SM00478 endonuclease III P029_03590 SM00525 P029_03590 P029_03595 SM00434 DNA Topoisomerase IV P029_03725 SM00248 ankyrin repeats P029_03735 SM00825 Beta-ketoacyl synthase P029_03745 SM00853 MutL C terminal dimerisation domain P029_03745 SM01340 P029_03745 P029_03770 SM00387 Histidine kinase-like ATPases P029_03770 SM00388 His Kinase A (phosphoacceptor) domain P029_03795 SM00843 P029_03795 P029_03805 SM01091 Transporter associated domain P029_03820 SM00450 Rhodanese Homology Domain P029_03845 SM00382 ATPases associated with a variety of cellular activities P029_03845 SM00464 Found in ATP-dependent protease La (LON) P029_03850 SM00382 ATPases associated with a variety of cellular activities P029_03850 SM00994 ClpX C4-type zinc finger P029_03850 SM01086 C-terminal, D2-small domain, of ClpB protein P029_03925 SM00382 ATPases associated with a variety of cellular activities P029_03940 SM00382 ATPases associated with a variety of cellular activities P029_03950 SM00493 P029_03950 P029_03955 SM00363 S4 RNA-binding domain P029_03955 SM01390 P029_03955 P029_04025 SM00481 DNA polymerase alpha chain like domain P029_04115 SM00663 RNA polymerase I subunit A N-terminus P029_04140 SM00649 Ribosomal protein L11/L12 P029_04145 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. P029_04165 SM00838 Elongation factor G C-terminus P029_04165 SM00889 Elongation factor G, domain IV P029_04180 SM00849 Metallo-beta-lactamase superfamily P029_04240 SM00881 CoA binding domain P029_04250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain P029_04260 SM01230 P029_04260 P029_04265 SM00849 Metallo-beta-lactamase superfamily P029_04300 SM00357 Cold shock protein domain P029_04300 SM00382 ATPases associated with a variety of cellular activities P029_04300 SM00959 Rho termination factor, N-terminal domain P029_04310 SM00382 ATPases associated with a variety of cellular activities P029_04310 SM01086 C-terminal, D2-small domain, of ClpB protein P029_04360 SM01209 P029_04360 P029_04360 SM01210 P029_04360 P029_04365 SM01323 P029_04365 P029_04395 SM00480 DNA polymerase III beta subunit P029_04400 SM00474 3'-5' exonuclease P029_04405 SM00448 cheY-homologous receiver domain P029_04405 SM00862 Transcriptional regulatory protein, C terminal P029_04410 SM00530 Helix-turn-helix XRE-family like proteins P029_04460 SM01400 P029_04460 P029_04635 SM00244 prohibitin homologues P029_04640 SM00244 prohibitin homologues P029_04645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P029_04650 SM00358 Double-stranded RNA binding motif P029_04650 SM00535 Ribonuclease III family P029_04725 SM00842 Cell division protein FtsA P029_04735 SM01329 P029_04735 P029_04770 SM00904 Riboflavin kinase P029_04790 SM00957 SecA DEAD-like domain P029_04790 SM00958 SecA preprotein cross-linking domain P029_04795 SM00382 ATPases associated with a variety of cellular activities P029_04810 SM00842 Cell division protein FtsA P029_04915 SM00798 AICARFT/IMPCHase bienzyme P029_04915 SM00851 MGS-like domain P029_04925 SM00935 Outer membrane protein (OmpH-like) P029_04935 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. P029_04950 SM00936 Penicillin-binding protein 5, C-terminal domain P029_04970 SM00562 P029_04970 P029_04975 SM00530 Helix-turn-helix XRE-family like proteins P029_05020 SM01133 P029_05020 P029_05055 SM01230 P029_05055 P029_05100 SM00864 Tubulin/FtsZ family, GTPase domain P029_05100 SM00865 Tubulin/FtsZ family, C-terminal domain P029_05120 SM00487 DEAD-like helicases superfamily P029_05120 SM00490 helicase superfamily c-terminal domain P029_05170 SM00861 Transketolase, pyrimidine binding domain P029_05285 SM01001 AIR carboxylase P029_05295 SM00411 bacterial (prokaryotic) histone like domain P029_05300 SM00422 helix_turn_helix, mercury resistance P029_05325 SM00382 ATPases associated with a variety of cellular activities P029_05325 SM00962 SRP54-type protein, GTPase domain P029_05325 SM00963 SRP54-type protein, helical bundle domain P029_05375 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain P029_05405 SM00028 Tetratricopeptide repeats P029_05520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain P029_05530 SM00382 ATPases associated with a variety of cellular activities P029_05540 SM00859 Semialdehyde dehydrogenase, NAD binding domain P029_05565 SM00382 ATPases associated with a variety of cellular activities P029_05620 SM00487 DEAD-like helicases superfamily P029_05620 SM00490 helicase superfamily c-terminal domain P029_05640 SM00986 Uracil DNA glycosylase superfamily P029_05640 SM00987 UreE urease accessory protein, C-terminal domain P029_05650 SM00563 Phosphate acyltransferases