P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PIRSF PIRSF002583 2 637 2.4E-199 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 93 110 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 26 48 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 120 142 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 5 25 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 PRINTS PR00775 90kDa heat shock protein signature 75 92 1.9E-54 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Gene3D G3DSA:3.30.565.10 2 223 3.9E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 182 9.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Gene3D G3DSA:3.40.50.11260 396 487 2.2E-25 T 14-10-2018 P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 631 28.717 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Gene3D G3DSA:1.20.120.790 495 631 5.1E-30 T 14-10-2018 IPR037196 HSP90, C-terminal domain P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 SUPERFAMILY SSF110942 515 631 3.27E-28 T 14-10-2018 IPR037196 HSP90, C-terminal domain P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 SUPERFAMILY SSF54211 224 476 1.21E-83 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 SMART SM00387 27 183 0.0013 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Gene3D G3DSA:3.30.230.80 224 395 2.2E-58 T 14-10-2018 P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 Pfam PF00183 Hsp90 protein 215 632 1.7E-103 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 P029_03570 579cfa1a686bd0aaecc01ee894251ad2 637 SUPERFAMILY SSF55874 5 213 1.38E-62 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 SUPERFAMILY SSF54810 400 529 7.32E-44 T 14-10-2018 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 Gene3D G3DSA:3.40.50.880 2 206 4.1E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 SUPERFAMILY SSF52317 3 198 1.24E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 Pfam PF00958 GMP synthase C terminal domain 431 528 2.9E-35 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 175 188 1.2E-7 T 14-10-2018 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 1.2E-7 T 14-10-2018 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.2E-7 T 14-10-2018 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 1 529 46.774 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 Pfam PF00117 Glutamine amidotransferase class-I 6 197 7.8E-36 T 14-10-2018 IPR017926 Glutamine amidotransferase P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 Gene3D G3DSA:3.30.300.10 401 529 1.0E-45 T 14-10-2018 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 SUPERFAMILY SSF52402 195 441 7.72E-49 T 14-10-2018 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 Gene3D G3DSA:3.40.50.620 207 400 1.1E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 210 529 1.8E-135 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 P029_05255 3081b49a62f2615548a0e15c8fbc7dff 529 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 4 199 2.8E-55 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 P029_04710 6176c90405cbef92812babb83519ff79 186 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 186 21.411 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_04710 6176c90405cbef92812babb83519ff79 186 Pfam PF00156 Phosphoribosyl transferase domain 41 149 1.5E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P029_04710 6176c90405cbef92812babb83519ff79 186 Gene3D G3DSA:3.40.50.2020 1 183 7.9E-46 T 14-10-2018 P029_04710 6176c90405cbef92812babb83519ff79 186 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 5 182 1.1E-52 T 14-10-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_04710 6176c90405cbef92812babb83519ff79 186 SUPERFAMILY SSF53271 3 142 6.69E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 Gene3D G3DSA:3.90.650.10 169 344 7.6E-67 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 SUPERFAMILY SSF55326 4 167 1.5E-45 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 340 1.5E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 Gene3D G3DSA:3.30.1330.10 1 168 3.3E-62 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 SUPERFAMILY SSF56042 174 342 8.22E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 344 42.02 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 334 1.5E-122 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_00890 f9926b2b17c2909193cfda4ea67194ec 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 162 6.7E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain P029_00690 64889cca26739e64290db948e9fa1e9d 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 Gene3D G3DSA:3.50.50.60 14 423 1.7E-168 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00690 64889cca26739e64290db948e9fa1e9d 601 PIRSF PIRSF000171 4 591 2.9E-39 T 14-10-2018 P029_00690 64889cca26739e64290db948e9fa1e9d 601 Gene3D G3DSA:3.90.700.10 253 356 1.7E-168 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 SUPERFAMILY SSF46977 458 601 1.7E-48 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 467 601 7.8E-44 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 Gene3D G3DSA:4.10.80.40 552 601 6.4E-11 T 14-10-2018 P029_00690 64889cca26739e64290db948e9fa1e9d 601 SUPERFAMILY SSF56425 243 361 5.68E-43 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 SUPERFAMILY SSF51905 5 435 1.3E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00690 64889cca26739e64290db948e9fa1e9d 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 601 3.3E-244 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 601 1.2E-290 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00690 64889cca26739e64290db948e9fa1e9d 601 Gene3D G3DSA:1.20.58.100 440 551 3.1E-37 T 14-10-2018 P029_00690 64889cca26739e64290db948e9fa1e9d 601 Pfam PF00890 FAD binding domain 14 412 1.2E-120 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 9 330 8.3E-115 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 Gene3D G3DSA:3.30.300.10 7 224 2.3E-119 T 14-10-2018 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 213 221 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 Pfam PF02772 S-adenosylmethionine synthetase, central domain 70 185 3.4E-32 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 SUPERFAMILY SSF55973 187 333 5.89E-60 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 SUPERFAMILY SSF55973 7 66 2.67E-8 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 187 327 6.3E-60 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 Gene3D G3DSA:3.30.300.10 92 187 2.3E-119 T 14-10-2018 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 SUPERFAMILY SSF55973 66 186 1.14E-37 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 71 81 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 56 1.7E-6 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00260 7d71fd56da3b3c16d766efc37e086eac 341 Gene3D G3DSA:3.30.300.10 58 329 2.3E-119 T 14-10-2018 P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 SUPERFAMILY SSF56808 2 212 1.11E-69 T 14-10-2018 IPR023674 Ribosomal protein L1-like P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 212 9.1E-80 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 ProSitePatterns PS01199 Ribosomal protein L1 signature. 109 127 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 Gene3D G3DSA:3.40.50.790 55 147 7.5E-74 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 Gene3D G3DSA:3.30.190.20 8 212 7.5E-74 T 14-10-2018 P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 3 215 33.418 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 Pfam PF00687 Ribosomal protein L1p/L10e family 17 207 4.9E-44 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein P029_04135 ae75ca2726d9298a12fadf3236f09e67 216 PIRSF PIRSF002155 3 214 1.7E-64 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 SUPERFAMILY SSF52540 96 381 1.78E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Gene3D G3DSA:3.40.50.300 95 382 1.4E-124 T 14-10-2018 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 499 1.7E-221 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 93 5.1E-10 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 503 46.661 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 375 1.7E-71 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 PIRSF PIRSF039088 2 506 3.8E-234 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Gene3D G3DSA:1.20.150.20 383 506 6.3E-40 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 SUPERFAMILY SSF47917 384 506 3.92E-38 T 14-10-2018 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Gene3D G3DSA:2.40.30.20 3 94 3.1E-24 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 SUPERFAMILY SSF50615 11 94 3.4E-21 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_05485 26e460f0fc7793bc7f6cef07f112a22e 506 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 489 2.5E-38 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02390 778ff2abac457197594dd0fa66d8ecaf 197 Gene3D G3DSA:3.40.30.10 21 197 9.5E-23 T 14-10-2018 P029_02390 778ff2abac457197594dd0fa66d8ecaf 197 Pfam PF08534 Redoxin 57 182 9.9E-7 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 P029_02390 778ff2abac457197594dd0fa66d8ecaf 197 SUPERFAMILY SSF52833 7 187 2.2E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_02610 73306463dec458b29199aee1c12d7f3f 342 Pfam PF00814 Glycoprotease family 25 313 1.8E-90 T 14-10-2018 IPR000905 Gcp-like domain P029_02610 73306463dec458b29199aee1c12d7f3f 342 Gene3D G3DSA:3.30.420.40 129 299 6.2E-118 T 14-10-2018 P029_02610 73306463dec458b29199aee1c12d7f3f 342 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 3 338 58.892 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 P029_02610 73306463dec458b29199aee1c12d7f3f 342 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 319 2.5E-122 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 P029_02610 73306463dec458b29199aee1c12d7f3f 342 SUPERFAMILY SSF53067 5 316 1.0E-40 T 14-10-2018 P029_02610 73306463dec458b29199aee1c12d7f3f 342 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 6 312 3.6E-99 T 14-10-2018 IPR017861 Kae1/TsaD family P029_02610 73306463dec458b29199aee1c12d7f3f 342 Gene3D G3DSA:3.30.420.40 6 321 6.2E-118 T 14-10-2018 P029_02610 73306463dec458b29199aee1c12d7f3f 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 7.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family P029_02610 73306463dec458b29199aee1c12d7f3f 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 7.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family P029_02610 73306463dec458b29199aee1c12d7f3f 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 7.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family P029_02610 73306463dec458b29199aee1c12d7f3f 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 7.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family P029_02610 73306463dec458b29199aee1c12d7f3f 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 6 19 7.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family P029_02610 73306463dec458b29199aee1c12d7f3f 342 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 7.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family P029_05325 9a260878f373266cfea19b89c9c4e7be 305 SUPERFAMILY SSF52540 100 303 2.61E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05325 9a260878f373266cfea19b89c9c4e7be 305 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 36 303 3.5E-92 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 P029_05325 9a260878f373266cfea19b89c9c4e7be 305 SMART SM00962 103 304 2.4E-107 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_05325 9a260878f373266cfea19b89c9c4e7be 305 Pfam PF00448 SRP54-type protein, GTPase domain 103 303 2.9E-73 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_05325 9a260878f373266cfea19b89c9c4e7be 305 Gene3D G3DSA:1.20.120.140 9 302 1.4E-99 T 14-10-2018 P029_05325 9a260878f373266cfea19b89c9c4e7be 305 SMART SM00382 102 239 4.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_05325 9a260878f373266cfea19b89c9c4e7be 305 SMART SM00963 11 90 3.7E-8 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_05325 9a260878f373266cfea19b89c9c4e7be 305 SUPERFAMILY SSF47364 6 74 7.33E-11 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 P029_05325 9a260878f373266cfea19b89c9c4e7be 305 Gene3D G3DSA:3.40.50.300 103 292 1.4E-99 T 14-10-2018 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 Gene3D G3DSA:3.10.150.10 10 254 1.8E-102 T 14-10-2018 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 PIRSF PIRSF000804 9 375 3.0E-96 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 SUPERFAMILY SSF55979 10 125 2.88E-23 T 14-10-2018 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 Gene3D G3DSA:3.70.10.10 145 373 1.8E-102 T 14-10-2018 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 10 126 1.3E-28 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 SMART SM00480 25 371 1.1E-93 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 10 374 1.8E-85 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 SUPERFAMILY SSF55979 134 256 1.46E-25 T 14-10-2018 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 SUPERFAMILY SSF55979 259 375 2.46E-26 T 14-10-2018 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 259 374 8.2E-24 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P029_04395 1cedcdd6d5bac02105614b8c2ddbf304 375 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 255 3.3E-28 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 P029_02450 29ab16c3228c1b8612ae819ef9252a8f 202 Gene3D G3DSA:3.30.830.10 25 200 2.1E-21 T 14-10-2018 P029_02450 29ab16c3228c1b8612ae819ef9252a8f 202 SUPERFAMILY SSF63411 21 192 5.98E-25 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P029_02450 29ab16c3228c1b8612ae819ef9252a8f 202 Pfam PF00675 Insulinase (Peptidase family M16) 53 168 1.3E-5 T 14-10-2018 IPR011765 Peptidase M16, N-terminal P029_04305 6af490a73fe877fcb7a00a16828836bf 189 PIRSF PIRSF039093 5 189 2.0E-82 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 P029_04305 6af490a73fe877fcb7a00a16828836bf 189 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 12 187 2.7E-78 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 P029_04305 6af490a73fe877fcb7a00a16828836bf 189 Gene3D G3DSA:3.60.20.10 7 188 1.7E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P029_04305 6af490a73fe877fcb7a00a16828836bf 189 Pfam PF00227 Proteasome subunit 11 186 6.3E-19 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 P029_04305 6af490a73fe877fcb7a00a16828836bf 189 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 11 187 38.435 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 P029_04305 6af490a73fe877fcb7a00a16828836bf 189 SUPERFAMILY SSF56235 9 187 2.65E-53 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P029_02705 a6f6c859dfb1f58d42628de264bec996 426 SUPERFAMILY SSF55681 21 340 4.59E-88 T 14-10-2018 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 SUPERFAMILY SSF52954 325 424 4.25E-23 T 14-10-2018 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 Gene3D G3DSA:3.30.930.10 1 323 2.9E-106 T 14-10-2018 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 Hamap MF_01570 Proline--tRNA ligase [proS]. 1 426 58.82 T 14-10-2018 IPR023716 Proline-tRNA ligase, class IIa, type 2 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 320 9.1E-39 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 Gene3D G3DSA:3.40.50.800 324 426 4.0E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily P029_02705 a6f6c859dfb1f58d42628de264bec996 426 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 226 1.7E-92 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 P029_02705 a6f6c859dfb1f58d42628de264bec996 426 Pfam PF03129 Anticodon binding domain 337 424 1.8E-13 T 14-10-2018 IPR004154 Anticodon-binding P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Pfam PF00012 Hsp70 protein 10 603 6.1E-259 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF53067 10 185 8.55E-61 T 14-10-2018 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF100934 505 601 1.31E-16 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:1.20.1270.10 522 603 7.9E-21 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.420.40 11 377 3.3E-152 T 14-10-2018 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 7 640 35.966 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 13 20 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:2.60.34.10 381 521 8.6E-67 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 9 603 3.4E-279 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.30.420.40 181 364 3.3E-152 T 14-10-2018 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 59 67 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 9 22 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 386 405 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 467 483 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 332 348 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 139 159 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 199 209 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 363 383 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 PRINTS PR00301 70kDa heat shock protein signature 37 49 7.2E-79 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 Gene3D G3DSA:3.90.640.10 226 313 3.3E-152 T 14-10-2018 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF100920 382 537 8.89E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 335 349 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P029_01495 5ea81c507c7ea49376f8a8f49ce31e8b 649 SUPERFAMILY SSF53067 188 380 5.32E-64 T 14-10-2018 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 15.746 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.2E-11 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.2E-11 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.2E-11 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.0E-19 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 Pfam PF01632 Ribosomal protein L35 2 58 4.5E-18 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 Gene3D G3DSA:2.40.50.530 1 64 1.5E-20 T 14-10-2018 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 SUPERFAMILY SSF143034 2 64 5.76E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00275 3fd4aca7dea9181d812224aef559f3a5 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 24 344 32.959 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 45 343 5.4E-96 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 SUPERFAMILY SSF56553 73 201 4.06E-30 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 SUPERFAMILY SSF55257 38 254 2.35E-26 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 284 353 4.0E-35 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 SUPERFAMILY SSF47789 278 353 6.8E-27 T 14-10-2018 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 49 251 1.4E-21 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Gene3D G3DSA:3.30.1360.10 43 251 3.9E-69 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 279 335 5.3E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Gene3D G3DSA:2.170.120.12 73 200 3.9E-69 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 83 174 7.7E-14 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 SMART SM00662 43 257 1.6E-56 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_01310 fc7d77968073697c19a57624f5bfd7e9 363 Gene3D G3DSA:1.10.150.20 275 356 6.0E-36 T 14-10-2018 P029_05615 1cbfb929cb9070196385097b3413c58b 508 Gene3D G3DSA:3.30.1360.200 188 319 7.6E-49 T 14-10-2018 P029_05615 1cbfb929cb9070196385097b3413c58b 508 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 488 7.7E-123 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 P029_05615 1cbfb929cb9070196385097b3413c58b 508 Pfam PF07549 SecD/SecF GG Motif 31 54 2.6E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site P029_05615 1cbfb929cb9070196385097b3413c58b 508 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 7 503 38.351 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 P029_05615 1cbfb929cb9070196385097b3413c58b 508 Pfam PF02355 Protein export membrane protein 322 487 1.2E-18 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial P029_05615 1cbfb929cb9070196385097b3413c58b 508 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 5.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_05615 1cbfb929cb9070196385097b3413c58b 508 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 5.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_05615 1cbfb929cb9070196385097b3413c58b 508 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 5.8E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_05615 1cbfb929cb9070196385097b3413c58b 508 SUPERFAMILY SSF82866 298 489 2.62E-39 T 14-10-2018 P029_05615 1cbfb929cb9070196385097b3413c58b 508 Gene3D G3DSA:3.30.70.3400 137 320 7.6E-49 T 14-10-2018 P029_05615 1cbfb929cb9070196385097b3413c58b 508 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 251 481 1.7E-72 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P029_05615 1cbfb929cb9070196385097b3413c58b 508 Gene3D G3DSA:1.20.1640.10 321 494 3.7E-9 T 14-10-2018 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 122 22.464 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 Gene3D G3DSA:3.90.470.20 1 122 6.5E-35 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 118 1.6E-21 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 SUPERFAMILY SSF56214 1 120 1.23E-30 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 120 1.0E-25 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 120 1.6E-23 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 P029_02700 1c5b3a862b3a75a37eab5184143acd48 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 120 1.9E-25 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 SUPERFAMILY SSF50615 20 94 1.33E-22 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 SMART SM00382 162 409 4.5E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 Gene3D G3DSA:1.10.1140.10 373 489 4.1E-54 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 23 92 4.4E-18 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 370 1.5E-60 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 Hamap MF_01347 ATP synthase subunit beta [atpB]. 18 488 55.649 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 361 370 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 20 488 1.4E-242 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 Gene3D G3DSA:2.40.10.170 17 94 3.0E-27 T 14-10-2018 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 SUPERFAMILY SSF52540 96 374 1.22E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 Gene3D G3DSA:3.40.50.300 95 372 2.2E-112 T 14-10-2018 P029_02130 623fccd5eed049a6d4320ac31ea736d4 489 SUPERFAMILY SSF47917 374 488 3.4E-50 T 14-10-2018 P029_03245 934c63d4cd8d660ff93f2bd96e168652 154 SUPERFAMILY SSF52833 4 154 1.43E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_03245 934c63d4cd8d660ff93f2bd96e168652 154 Gene3D G3DSA:3.40.30.10 5 153 1.6E-42 T 14-10-2018 P029_03245 934c63d4cd8d660ff93f2bd96e168652 154 PIRSF PIRSF000239 1 154 5.0E-25 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_03245 934c63d4cd8d660ff93f2bd96e168652 154 Pfam PF00578 AhpC/TSA family 6 132 5.4E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_00645 8fb3e44ebe3ff54ae84ca704824a72cf 109 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 16.61 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 P029_00645 8fb3e44ebe3ff54ae84ca704824a72cf 109 Pfam PF01250 Ribosomal protein S6 4 92 7.2E-21 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00645 8fb3e44ebe3ff54ae84ca704824a72cf 109 TIGRFAM TIGR00166 S6: ribosomal protein bS6 4 94 8.7E-18 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00645 8fb3e44ebe3ff54ae84ca704824a72cf 109 Gene3D G3DSA:3.30.70.60 1 100 1.6E-21 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 P029_00645 8fb3e44ebe3ff54ae84ca704824a72cf 109 SUPERFAMILY SSF54995 2 104 2.49E-27 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00455 ce7ede24cc8d5b7fd09a06d7cf40f541 158 Gene3D G3DSA:3.10.420.10 1 158 1.0E-51 T 14-10-2018 IPR035958 SecB-like superfamily P029_00455 ce7ede24cc8d5b7fd09a06d7cf40f541 158 Hamap MF_00821 Protein-export protein SecB [secB]. 1 154 27.987 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P029_00455 ce7ede24cc8d5b7fd09a06d7cf40f541 158 SUPERFAMILY SSF54611 3 156 8.28E-42 T 14-10-2018 IPR035958 SecB-like superfamily P029_00455 ce7ede24cc8d5b7fd09a06d7cf40f541 158 Pfam PF02556 Preprotein translocase subunit SecB 2 152 3.8E-49 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P029_00455 ce7ede24cc8d5b7fd09a06d7cf40f541 158 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 2 152 1.5E-35 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 P029_03215 f11ded897750ed0b81a5d0a05dc2230b 233 SUPERFAMILY SSF63892 2 232 1.83E-81 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P029_03215 f11ded897750ed0b81a5d0a05dc2230b 233 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 2 231 3.6E-82 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P029_03215 f11ded897750ed0b81a5d0a05dc2230b 233 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 233 92.69 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P029_03215 f11ded897750ed0b81a5d0a05dc2230b 233 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 232 1.5E-71 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 P029_03215 f11ded897750ed0b81a5d0a05dc2230b 233 Gene3D G3DSA:3.20.20.70 1 233 1.5E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 443 206.353 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 184 388 1.6E-27 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF52540 113 396 6.48E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04300 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF50249 73 144 2.68E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_04300 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00959 27 69 2.4E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00382 195 375 8.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_04300 189b133a67f2dd2a43ffd13243de378d 443 TIGRFAM TIGR00767 rho: transcription termination factor Rho 25 442 6.7E-193 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF07497 Rho termination factor, RNA-binding domain 75 145 2.7E-25 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 SMART SM00357 74 140 2.4E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:3.40.50.300 152 442 6.1E-124 T 14-10-2018 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:2.40.50.140 69 145 2.1E-27 T 14-10-2018 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Gene3D G3DSA:1.10.720.10 23 68 1.4E-9 T 14-10-2018 P029_04300 189b133a67f2dd2a43ffd13243de378d 443 SUPERFAMILY SSF68912 23 68 3.69E-8 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily P029_04300 189b133a67f2dd2a43ffd13243de378d 443 Pfam PF07498 Rho termination factor, N-terminal domain 27 65 1.3E-8 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P029_01940 f36feb1d2319baa533fca2745702a00e 825 SUPERFAMILY SSF50447 498 580 6.03E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_01940 f36feb1d2319baa533fca2745702a00e 825 Gene3D G3DSA:3.40.50.300 322 495 3.1E-68 T 14-10-2018 P029_01940 f36feb1d2319baa533fca2745702a00e 825 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 249 298 1.3E-8 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal P029_01940 f36feb1d2319baa533fca2745702a00e 825 SUPERFAMILY SSF52540 320 494 1.37E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01940 f36feb1d2319baa533fca2745702a00e 825 Pfam PF11987 Translation-initiation factor 2 613 713 1.1E-31 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 P029_01940 f36feb1d2319baa533fca2745702a00e 825 SUPERFAMILY SSF52156 616 731 2.62E-31 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily P029_01940 f36feb1d2319baa533fca2745702a00e 825 SUPERFAMILY SSF50447 726 820 1.28E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_01940 f36feb1d2319baa533fca2745702a00e 825 Pfam PF00009 Elongation factor Tu GTP binding domain 329 485 2.5E-31 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01940 f36feb1d2319baa533fca2745702a00e 825 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 327 482 2.7E-34 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_01940 f36feb1d2319baa533fca2745702a00e 825 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 241 822 6.3E-202 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 P029_01940 f36feb1d2319baa533fca2745702a00e 825 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 18 822 15.084 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 P029_01940 f36feb1d2319baa533fca2745702a00e 825 Gene3D G3DSA:2.40.30.10 496 609 8.1E-36 T 14-10-2018 P029_01940 f36feb1d2319baa533fca2745702a00e 825 Gene3D G3DSA:2.40.30.10 726 822 2.5E-24 T 14-10-2018 P029_01940 f36feb1d2319baa533fca2745702a00e 825 ProSitePatterns PS01176 Initiation factor 2 signature. 775 797 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 P029_01940 f36feb1d2319baa533fca2745702a00e 825 Gene3D G3DSA:3.40.50.10050 618 725 1.0E-33 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily P029_03155 b06ad04627961eed72155c954aefd722 352 Gene3D G3DSA:3.30.420.40 161 326 3.6E-122 T 14-10-2018 P029_03155 b06ad04627961eed72155c954aefd722 352 SUPERFAMILY SSF53067 156 342 2.35E-44 T 14-10-2018 P029_03155 b06ad04627961eed72155c954aefd722 352 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 76 99 1.1E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_03155 b06ad04627961eed72155c954aefd722 352 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 309 335 1.1E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_03155 b06ad04627961eed72155c954aefd722 352 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 56 74 1.1E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_03155 b06ad04627961eed72155c954aefd722 352 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 139 158 1.1E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_03155 b06ad04627961eed72155c954aefd722 352 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 194 214 1.1E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_03155 b06ad04627961eed72155c954aefd722 352 SUPERFAMILY SSF53067 17 153 6.68E-37 T 14-10-2018 P029_03155 b06ad04627961eed72155c954aefd722 352 Pfam PF06723 MreB/Mbl protein 17 344 1.4E-132 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_03155 b06ad04627961eed72155c954aefd722 352 Gene3D G3DSA:3.30.420.40 19 337 3.6E-122 T 14-10-2018 P029_03155 b06ad04627961eed72155c954aefd722 352 Gene3D G3DSA:3.90.640.10 193 268 3.6E-122 T 14-10-2018 P029_03155 b06ad04627961eed72155c954aefd722 352 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 16 345 1.9E-140 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_04130 4636e849f2221db015af98b33f6b18d7 160 Pfam PF00466 Ribosomal protein L10 3 98 9.9E-19 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 P029_04130 4636e849f2221db015af98b33f6b18d7 160 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 35 157 7.0E-4 T 14-10-2018 P029_04130 4636e849f2221db015af98b33f6b18d7 160 Gene3D G3DSA:3.30.70.1730 1 132 3.8E-28 T 14-10-2018 P029_04130 4636e849f2221db015af98b33f6b18d7 160 SUPERFAMILY SSF160369 3 158 7.32E-34 T 14-10-2018 P029_01215 c1f27f096717d857ae3899141efd06a8 94 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 6.0E-30 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 P029_01215 c1f27f096717d857ae3899141efd06a8 94 ProSitePatterns PS00323 Ribosomal protein S19 signature. 54 78 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 90 20.768 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 Gene3D G3DSA:3.30.860.10 1 93 1.8E-30 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 PIRSF PIRSF002144 1 93 1.1E-27 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 SUPERFAMILY SSF54570 2 85 2.62E-26 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 66 81 1.4E-15 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 34 53 1.4E-15 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 PRINTS PR00975 Ribosomal protein S19 family signature 54 66 1.4E-15 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01215 c1f27f096717d857ae3899141efd06a8 94 Pfam PF00203 Ribosomal protein S19 3 84 6.5E-27 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 Gene3D G3DSA:3.20.20.140 82 392 2.1E-132 T 14-10-2018 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 328 339 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 SUPERFAMILY SSF51338 24 447 7.04E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 Gene3D G3DSA:2.30.40.10 29 445 2.1E-132 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 Pfam PF01979 Amidohydrolase family 77 445 1.4E-31 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 Hamap MF_00220_B Dihydroorotase [pyrC]. 23 448 41.935 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 67 448 1.9E-128 T 14-10-2018 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 ProSitePatterns PS00482 Dihydroorotase signature 1. 84 92 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01045 b3696c513a37560f9e9382d5a2cb5f13 449 SUPERFAMILY SSF51556 81 391 6.01E-102 T 14-10-2018 IPR032466 Metal-dependent hydrolase P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:2.40.270.10 817 856 1.4E-6 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:2.40.270.10 1066 1274 1.8E-80 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1094 1106 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 742 1295 8.4E-148 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 SUPERFAMILY SSF64484 29 1375 0.0 T 14-10-2018 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 382 479 6.4E-21 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 175 247 3.3E-9 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:3.90.1100.10 32 180 1.9E-50 T 14-10-2018 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:3.90.1100.10 669 738 3.5E-20 T 14-10-2018 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:3.90.1100.10 466 646 4.5E-68 T 14-10-2018 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:3.90.1800.10 1284 1357 8.1E-11 T 14-10-2018 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:3.90.1110.10 181 260 6.0E-27 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:2.40.50.150 857 977 3.9E-33 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 538 606 9.3E-32 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:2.40.50.100 739 816 1.2E-28 T 14-10-2018 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1298 1372 1.8E-24 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 33 1370 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 22 1374 11.767 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Gene3D G3DSA:3.90.1110.10 345 465 2.1E-28 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF04563 RNA polymerase beta subunit 37 519 9.3E-22 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04120 53ccb622442c4b8286cd9539b7838ecd 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 616 681 1.5E-21 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 127 289 5.3E-63 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 SUPERFAMILY SSF51735 126 287 1.3E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 124 3.5E-39 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 Hamap MF_01576 Bifunctional protein FolD [folD]. 6 290 37.399 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 208 237 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 37 59 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 113 134 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 78 105 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 263 281 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 246 262 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 159 179 1.6E-80 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 267 275 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 SUPERFAMILY SSF53223 7 125 1.34E-40 T 14-10-2018 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 79 104 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 Gene3D G3DSA:3.40.50.10860 11 283 5.4E-104 T 14-10-2018 P029_00755 c0762355239f4ec9e9a1fe6c496f0c16 304 Gene3D G3DSA:3.40.50.720 9 266 5.4E-104 T 14-10-2018 P029_02845 a99d74233aa8cf63469475b66292494b 251 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 3 242 3.9E-47 T 14-10-2018 IPR011928 Bacteriophage phiJL001, Gp84 P029_02845 a99d74233aa8cf63469475b66292494b 251 Pfam PF09356 Phage conserved hypothetical protein BR0599 166 242 1.6E-25 T 14-10-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal P029_02845 a99d74233aa8cf63469475b66292494b 251 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 2 135 2.2E-29 T 14-10-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1067 12.252 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 680 881 7.7E-30 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 2.2E-62 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SMART SM01096 422 544 9.7E-59 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Gene3D G3DSA:3.40.50.20 1 116 1.0E-45 T 14-10-2018 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SUPERFAMILY SSF52440 1 127 5.04E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SMART SM00851 960 1046 2.4E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Gene3D G3DSA:3.30.470.20 673 940 3.4E-103 T 14-10-2018 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Gene3D G3DSA:1.10.1030.10 404 548 5.1E-39 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SUPERFAMILY SSF48108 396 547 2.75E-44 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SUPERFAMILY SSF52335 940 1077 1.31E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Gene3D G3DSA:3.30.470.20 120 403 3.5E-109 T 14-10-2018 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 1.4E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Gene3D G3DSA:3.40.50.20 557 669 1.6E-40 T 14-10-2018 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 298 305 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Pfam PF02142 MGS-like domain 963 1045 2.5E-16 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SUPERFAMILY SSF56059 680 938 1.13E-93 T 14-10-2018 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1055 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Gene3D G3DSA:3.40.50.1380 941 1079 1.6E-34 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 544 8.1E-37 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SUPERFAMILY SSF56059 128 401 5.13E-98 T 14-10-2018 P029_01065 404118a125d0c8ac64c88a870a2c0dcd 1086 SUPERFAMILY SSF52440 561 681 5.32E-40 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P029_04360 9adfbc1b7a787914d72ca62551904170 418 SUPERFAMILY SSF56059 102 319 3.37E-55 T 14-10-2018 P029_04360 9adfbc1b7a787914d72ca62551904170 418 SMART SM01209 101 293 9.1E-112 T 14-10-2018 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.4E-69 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 417 1.2E-144 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 SUPERFAMILY SSF52440 1 100 6.62E-30 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P029_04360 9adfbc1b7a787914d72ca62551904170 418 SUPERFAMILY SSF51246 326 417 3.22E-25 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Gene3D G3DSA:3.40.50.20 2 93 3.2E-32 T 14-10-2018 P029_04360 9adfbc1b7a787914d72ca62551904170 418 SMART SM01210 327 417 7.5E-39 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Gene3D G3DSA:3.90.600.10 327 418 5.5E-31 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Gene3D G3DSA:3.30.470.20 189 326 8.1E-53 T 14-10-2018 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.4E-30 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 36.438 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 417 1.5E-25 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_04360 9adfbc1b7a787914d72ca62551904170 418 Gene3D G3DSA:3.30.1490.20 119 188 7.3E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P029_05795 d3151d8330da0ad494371c14cf83b791 280 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 12 278 3.1E-74 T 14-10-2018 IPR014148 P-type conjugative transfer protein VirB9 P029_05795 d3151d8330da0ad494371c14cf83b791 280 Pfam PF03524 Conjugal transfer protein 38 277 1.5E-53 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX P029_05795 d3151d8330da0ad494371c14cf83b791 280 Gene3D G3DSA:2.60.40.2500 177 280 1.9E-15 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 173 301 1.6E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 1.2E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 430 1.2E-23 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Gene3D G3DSA:3.30.300.20 351 432 3.1E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Pfam PF01926 50S ribosome-binding GTPase 177 294 3.5E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Pfam PF01926 50S ribosome-binding GTPase 3 118 9.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 SUPERFAMILY SSF52540 138 436 4.53E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Hamap MF_00195 GTPase Der [der]. 1 433 32.788 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Gene3D G3DSA:3.40.50.300 1 171 9.1E-38 T 14-10-2018 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 Gene3D G3DSA:3.40.50.300 172 349 1.9E-41 T 14-10-2018 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 9.7E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 88 9.7E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 PIRSF PIRSF006485 1 438 5.2E-154 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 430 4.7E-149 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 P029_01695 6a21cee9fee26bb92a77d77b41fc0bb6 440 SUPERFAMILY SSF52540 3 164 7.81E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00065 60587cc0f74a55d79eb5221c6753b189 701 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 697 2.2E-120 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 239 254 1.6E-16 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 307 323 1.6E-16 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 384 403 1.6E-16 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 1.6E-16 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 SUPERFAMILY SSF109604 331 475 4.27E-12 T 14-10-2018 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 552 1.1E-142 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 Pfam PF05746 DALR anticodon binding domain 581 682 5.9E-5 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P029_00065 60587cc0f74a55d79eb5221c6753b189 701 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 697 18.168 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_02945 0e8b29211a06f11abc891534291f5404 692 SUPERFAMILY SSF53706 213 630 7.49E-90 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 600 1.4E-217 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 118 4.4E-16 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 Gene3D G3DSA:3.10.20.740 1 123 3.6E-40 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 SUPERFAMILY SSF54292 2 73 4.71E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P029_02945 0e8b29211a06f11abc891534291f5404 692 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 SMART SM00929 83 123 7.1E-20 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 Gene3D G3DSA:3.40.50.740 272 410 5.7E-5 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 Pfam PF00384 Molybdopterin oxidoreductase 271 604 1.7E-65 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 SUPERFAMILY SSF54862 75 211 8.37E-37 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 Gene3D G3DSA:3.30.70.20 124 204 1.9E-6 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 Gene3D G3DSA:3.40.50.740 445 639 3.5E-24 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 1.1E-15 T 14-10-2018 P029_02945 0e8b29211a06f11abc891534291f5404 692 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 658 683 8.1E-13 T 14-10-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02945 0e8b29211a06f11abc891534291f5404 692 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_04080 605a228a5d30e39c9ebd378bda140bd4 424 Pfam PF01617 Surface antigen 26 424 3.8E-65 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04080 605a228a5d30e39c9ebd378bda140bd4 424 SUPERFAMILY SSF56925 305 422 2.43E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04080 605a228a5d30e39c9ebd378bda140bd4 424 Gene3D G3DSA:2.40.160.20 237 385 5.4E-6 T 14-10-2018 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Gene3D G3DSA:2.10.230.10 152 212 5.9E-31 T 14-10-2018 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 SUPERFAMILY SSF49493 263 351 2.75E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Gene3D G3DSA:2.60.260.20 122 254 5.9E-31 T 14-10-2018 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 SMART SM00271 4 62 8.9E-31 T 14-10-2018 IPR001623 DnaJ domain P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Pfam PF01556 DnaJ C terminal domain 126 340 2.1E-39 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 SUPERFAMILY SSF49493 120 272 4.58E-17 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 PRINTS PR00625 DnaJ domain signature 7 25 3.0E-30 T 14-10-2018 IPR001623 DnaJ domain P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 PRINTS PR00625 DnaJ domain signature 42 62 3.0E-30 T 14-10-2018 IPR001623 DnaJ domain P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 PRINTS PR00625 DnaJ domain signature 25 40 3.0E-30 T 14-10-2018 IPR001623 DnaJ domain P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 PRINTS PR00625 DnaJ domain signature 62 81 3.0E-30 T 14-10-2018 IPR001623 DnaJ domain P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Pfam PF00226 DnaJ domain 5 67 1.0E-27 T 14-10-2018 IPR001623 DnaJ domain P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Gene3D G3DSA:2.60.260.20 259 367 7.0E-31 T 14-10-2018 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Gene3D G3DSA:1.10.287.110 2 117 2.0E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 39.062 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 SUPERFAMILY SSF57938 139 216 8.89E-18 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 Pfam PF00684 DnaJ central domain 152 212 7.3E-10 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 357 4.7E-128 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 SUPERFAMILY SSF46565 2 109 2.09E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily P029_00070 bd0a430cc2b7f2b7a9eec905c66d41aa 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 14-10-2018 IPR018253 DnaJ domain, conserved site P029_03705 56c7ef22778f5f705131f8e35ef81dcb 157 Pfam PF02600 Disulfide bond formation protein DsbB 6 146 1.0E-24 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 P029_03705 56c7ef22778f5f705131f8e35ef81dcb 157 SUPERFAMILY SSF158442 7 147 1.31E-27 T 14-10-2018 IPR023380 DsbB-like superfamily P029_03705 56c7ef22778f5f705131f8e35ef81dcb 157 PIRSF PIRSF033913 1 155 4.2E-28 T 14-10-2018 IPR024199 Uncharacterised conserved protein, DsbB-like P029_03705 56c7ef22778f5f705131f8e35ef81dcb 157 Gene3D G3DSA:1.20.1550.10 2 156 7.2E-14 T 14-10-2018 IPR023380 DsbB-like superfamily P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 380 38.953 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 SUPERFAMILY SSF51735 2 148 2.33E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 SUPERFAMILY SSF55347 124 260 1.6E-51 T 14-10-2018 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 371 3.2E-33 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 Gene3D G3DSA:1.10.1740.10 298 385 6.4E-23 T 14-10-2018 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 225 1.3E-35 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 SUPERFAMILY SSF69055 288 382 3.66E-26 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 PIRSF PIRSF006205 1 385 3.3E-125 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 Gene3D G3DSA:3.40.50.720 1 148 5.1E-37 T 14-10-2018 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 1.9E-25 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01910 eb0cc3e2eff01add0b485d744fba1be4 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 5.3E-111 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 PIRSF PIRSF001529 1 423 8.1E-153 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 2.9E-144 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 Gene3D G3DSA:1.10.287.40 1 103 6.2E-19 T 14-10-2018 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 PRINTS PR00981 Seryl-tRNA synthetase signature 261 273 9.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 PRINTS PR00981 Seryl-tRNA synthetase signature 330 346 9.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 PRINTS PR00981 Seryl-tRNA synthetase signature 273 286 9.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 PRINTS PR00981 Seryl-tRNA synthetase signature 313 326 9.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 PRINTS PR00981 Seryl-tRNA synthetase signature 348 364 9.3E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 Gene3D G3DSA:3.30.930.10 104 425 1.2E-107 T 14-10-2018 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 SUPERFAMILY SSF46589 1 111 4.71E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 36.853 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.9E-19 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 SUPERFAMILY SSF55681 115 423 9.67E-86 T 14-10-2018 P029_01850 6038eef29b0d608335a1286b5b2465f8 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 6.1E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_01095 e69455b6251f563cb68dcf63bfe5fef8 305 SUPERFAMILY SSF48403 191 293 4.7E-15 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_01095 e69455b6251f563cb68dcf63bfe5fef8 305 Pfam PF13637 Ankyrin repeats (many copies) 228 274 1.6E-9 T 14-10-2018 P029_01095 e69455b6251f563cb68dcf63bfe5fef8 305 Gene3D G3DSA:1.25.40.20 182 295 2.4E-14 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_01095 e69455b6251f563cb68dcf63bfe5fef8 305 SMART SM00248 224 253 79.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_01095 e69455b6251f563cb68dcf63bfe5fef8 305 SMART SM00248 257 286 0.0017 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02860 6b463eaf0c0efc593daf09e969857fd8 174 Gene3D G3DSA:3.40.50.10420 1 174 5.8E-35 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily P029_02860 6b463eaf0c0efc593daf09e969857fd8 174 SUPERFAMILY SSF100950 6 173 3.07E-38 T 14-10-2018 IPR037171 NagB/RpiA transferase-like P029_02860 6b463eaf0c0efc593daf09e969857fd8 174 PIRSF PIRSF006806 2 172 2.9E-30 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase P029_02860 6b463eaf0c0efc593daf09e969857fd8 174 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 169 2.4E-22 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase P029_02860 6b463eaf0c0efc593daf09e969857fd8 174 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 7 169 2.6E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 SMART SM00864 16 208 2.0E-107 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 Pfam PF12327 FtsZ family, C-terminal domain 225 320 6.7E-39 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 129 150 9.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 101 121 9.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 215 236 9.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 PRINTS PR00423 Cell division protein FtsZ signature 192 214 9.3E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 345 36.525 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 SUPERFAMILY SSF52490 15 211 3.14E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 Gene3D G3DSA:3.40.50.1440 7 223 2.0E-78 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 14 329 6.5E-121 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 SMART SM00865 210 328 1.5E-57 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 Gene3D G3DSA:3.30.1330.20 224 333 4.1E-38 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 SUPERFAMILY SSF55307 207 322 1.26E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 P029_05100 b588c1902af56d5e4b5a6df3e392459a 400 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 177 5.1E-42 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 P029_04735 c302d43a0d731d0014f7941ced70c175 477 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 335 1.2E-88 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P029_04735 c302d43a0d731d0014f7941ced70c175 477 SUPERFAMILY SSF53659 2 339 5.94E-111 T 14-10-2018 P029_04735 c302d43a0d731d0014f7941ced70c175 477 Gene3D G3DSA:3.40.718.10 2 368 1.4E-120 T 14-10-2018 P029_04735 c302d43a0d731d0014f7941ced70c175 477 Gene3D G3DSA:3.30.70.1570 369 476 1.0E-10 T 14-10-2018 P029_04735 c302d43a0d731d0014f7941ced70c175 477 SMART SM01329 4 335 2.9E-143 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 P029_04735 c302d43a0d731d0014f7941ced70c175 477 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 P029_04735 c302d43a0d731d0014f7941ced70c175 477 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 3 474 8.5E-249 T 14-10-2018 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 P029_05510 224e6dca7e276a41a615a25fb7e86fff 399 Pfam PF02687 FtsX-like permease family 285 392 1.7E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 P029_05510 224e6dca7e276a41a615a25fb7e86fff 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 4.7E-110 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 P029_05510 224e6dca7e276a41a615a25fb7e86fff 399 Pfam PF12704 MacB-like periplasmic core domain 25 228 4.2E-16 T 14-10-2018 IPR025857 MacB-like periplasmic core domain P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 2.8E-32 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.3E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.3E-77 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 SUPERFAMILY SSF51246 332 446 1.26E-34 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 613 630 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 SUPERFAMILY SSF51230 589 655 8.64E-17 T 14-10-2018 IPR011053 Single hybrid motif P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 SMART SM00878 336 443 2.3E-49 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 Gene3D G3DSA:2.40.50.100 590 656 5.9E-18 T 14-10-2018 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 SUPERFAMILY SSF52440 1 113 1.37E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 SUPERFAMILY SSF56059 83 349 1.77E-69 T 14-10-2018 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 Gene3D G3DSA:3.30.470.130 1 447 2.4E-190 T 14-10-2018 P029_01565 cb5cae65de62a7d26a8709822e0c530f 659 Pfam PF00364 Biotin-requiring enzyme 593 655 9.1E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment P029_04415 e2d82a61607326219d4b405345102fcc 178 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P029_04415 e2d82a61607326219d4b405345102fcc 178 SUPERFAMILY SSF50324 3 172 4.32E-60 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P029_04415 e2d82a61607326219d4b405345102fcc 178 Gene3D G3DSA:3.90.80.10 5 178 3.0E-72 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P029_04415 e2d82a61607326219d4b405345102fcc 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 33.806 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P029_04415 e2d82a61607326219d4b405345102fcc 178 Pfam PF00719 Inorganic pyrophosphatase 18 170 4.2E-49 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 P029_05070 bc46ea2fae1e6fb588a8b39ac457342b 114 Pfam PF01617 Surface antigen 1 114 2.5E-45 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05070 bc46ea2fae1e6fb588a8b39ac457342b 114 SUPERFAMILY SSF56925 1 114 1.52E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05070 bc46ea2fae1e6fb588a8b39ac457342b 114 Gene3D G3DSA:2.40.160.20 1 79 3.8E-8 T 14-10-2018 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Pfam PF01138 3' exoribonuclease family, domain 1 331 464 4.4E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Pfam PF01138 3' exoribonuclease family, domain 1 14 143 1.7E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF50249 628 703 5.89E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 698 2.8E-296 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF46915 242 334 7.59E-12 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 700 28.572 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Pfam PF00013 KH domain 564 621 6.7E-11 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Gene3D G3DSA:3.30.230.70 235 557 4.7E-109 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF54791 563 647 2.57E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 246 327 1.1E-10 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SMART SM00316 628 697 4.8E-17 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Pfam PF00575 S1 RNA binding domain 626 697 7.8E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Gene3D G3DSA:3.30.1370.10 558 629 2.3E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Gene3D G3DSA:2.40.50.140 630 701 1.1E-23 T 14-10-2018 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF55666 458 553 5.37E-25 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF54211 2 143 7.59E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Gene3D G3DSA:3.30.230.70 1 230 6.5E-74 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SMART SM00322 560 625 1.3E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 Pfam PF03725 3' exoribonuclease family, domain 2 147 211 3.3E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF54211 305 495 1.27E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_03140 a9b02fc6acbb60e74ca87ea8a6e24625 838 SUPERFAMILY SSF55666 137 229 4.58E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 P029_04110 fc8a8b87c72ba4b7a1da41aa1621d998 210 Gene3D G3DSA:3.30.420.10 3 210 2.5E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_04110 fc8a8b87c72ba4b7a1da41aa1621d998 210 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 198 31.255 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 P029_04110 fc8a8b87c72ba4b7a1da41aa1621d998 210 SUPERFAMILY SSF53098 9 202 1.97E-60 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_04110 fc8a8b87c72ba4b7a1da41aa1621d998 210 Pfam PF01351 Ribonuclease HII 19 197 6.9E-37 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain P029_02490 326b273413186fd1cb9e658803babf5b 811 Pfam PF01131 DNA topoisomerase 132 553 4.1E-129 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 SMART SM00436 108 196 1.4E-45 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 SMART SM00493 1 102 4.6E-27 T 14-10-2018 IPR006171 TOPRIM domain P029_02490 326b273413186fd1cb9e658803babf5b 811 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 598 631 6.2E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 P029_02490 326b273413186fd1cb9e658803babf5b 811 Gene3D G3DSA:3.40.50.140 1 138 1.3E-47 T 14-10-2018 P029_02490 326b273413186fd1cb9e658803babf5b 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 479 493 7.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 7.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 378 394 7.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 76 89 7.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 7.4E-34 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 4 632 4.7E-242 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 SMART SM00437 250 516 5.5E-118 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 727 51.806 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 P029_02490 326b273413186fd1cb9e658803babf5b 811 Pfam PF13368 Topoisomerase C-terminal repeat 766 811 5.3E-9 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat P029_02490 326b273413186fd1cb9e658803babf5b 811 Pfam PF13368 Topoisomerase C-terminal repeat 707 758 6.7E-10 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat P029_02490 326b273413186fd1cb9e658803babf5b 811 SUPERFAMILY SSF56712 2 607 7.72E-187 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain P029_02490 326b273413186fd1cb9e658803babf5b 811 SUPERFAMILY SSF57783 598 633 9.35E-7 T 14-10-2018 P029_02490 326b273413186fd1cb9e658803babf5b 811 Pfam PF01751 Toprim domain 3 116 1.3E-25 T 14-10-2018 IPR006171 TOPRIM domain P029_02490 326b273413186fd1cb9e658803babf5b 811 Gene3D G3DSA:1.10.460.10 139 556 4.9E-162 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 P029_02490 326b273413186fd1cb9e658803babf5b 811 Gene3D G3DSA:1.10.290.10 258 393 4.9E-162 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 P029_02490 326b273413186fd1cb9e658803babf5b 811 Gene3D G3DSA:2.70.20.10 188 463 4.9E-162 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 P029_02490 326b273413186fd1cb9e658803babf5b 811 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 287 309 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 256 2.3E-54 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 165 181 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 5 420 6.7E-182 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 Gene3D G3DSA:3.40.47.10 268 412 1.9E-54 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 266 380 1.5E-40 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 Gene3D G3DSA:3.40.47.10 1 266 1.4E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 SMART SM00825 Beta-ketoacyl synthase 7 423 8.4E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 PIRSF PIRSF000447 2 423 9.4E-172 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 SUPERFAMILY SSF53901 5 263 4.12E-68 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 P029_03735 1b9e3c8635c1c66243fc95b8ce5065df 423 SUPERFAMILY SSF53901 226 422 3.2E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 P029_03490 fc9cf097c7929016f6e5243bd777b73e 442 SUPERFAMILY SSF56563 108 389 2.09E-60 T 14-10-2018 P029_03490 fc9cf097c7929016f6e5243bd777b73e 442 Pfam PF05065 Phage capsid family 114 387 4.3E-71 T 14-10-2018 IPR024455 Phage capsid P029_03490 fc9cf097c7929016f6e5243bd777b73e 442 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 26 388 1.4E-85 T 14-10-2018 IPR024455 Phage capsid P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 334 353 2.5E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 140 159 2.5E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 170 194 2.5E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 386 412 2.5E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 242 266 2.5E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 Pfam PF00361 Proton-conducting membrane transporter 134 428 2.1E-45 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00195 7e1787bd90ffa2364eb72e9455daa11f 499 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 73 102 1.0E-5 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 222 236 4.2E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 256 283 4.2E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 158 178 4.2E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 418 437 4.2E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 190 204 4.2E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 SUPERFAMILY SSF48295 355 458 6.54E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:1.10.8.60 291 362 2.2E-23 T 14-10-2018 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:1.10.1750.10 367 459 1.8E-31 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 SMART SM00382 157 285 4.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 10 459 31.268 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:3.30.300.180 8 85 7.3E-8 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF00308 Bacterial dnaA protein 123 341 4.0E-86 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 369 437 4.3E-28 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 SUPERFAMILY SSF52540 122 337 2.54E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 SMART SM00760 368 437 1.6E-38 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 13 458 1.7E-164 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Gene3D G3DSA:3.40.50.300 107 288 3.4E-49 T 14-10-2018 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 ProSitePatterns PS01008 DnaA protein signature. 418 437 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 P029_02065 4144eadfa18fcc6807b742f39d6e39d0 459 Pfam PF11638 DnaA N-terminal domain 13 72 5.3E-17 T 14-10-2018 IPR024633 DnaA N-terminal domain P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 SUPERFAMILY SSF54631 192 331 2.74E-28 T 14-10-2018 P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 Pfam PF00571 CBS domain 274 319 1.6E-4 T 14-10-2018 IPR000644 CBS domain P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 Pfam PF00571 CBS domain 197 252 4.2E-4 T 14-10-2018 IPR000644 CBS domain P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 Pfam PF03471 Transporter associated domain 336 410 8.1E-16 T 14-10-2018 IPR005170 Transporter-associated domain P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 SUPERFAMILY SSF56176 333 416 2.7E-17 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 SMART SM01091 335 412 2.3E-18 T 14-10-2018 IPR005170 Transporter-associated domain P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 Pfam PF01595 Domain of unknown function DUF21 3 178 2.7E-39 T 14-10-2018 IPR002550 CNNM, transmembrane domain P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 Gene3D G3DSA:3.10.580.10 179 327 5.1E-46 T 14-10-2018 P029_03805 f9ba2fbdc93ffaeee5aa7daa7cc583cd 422 Gene3D G3DSA:3.30.465.10 334 410 4.0E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 Gene3D G3DSA:3.30.300.10 13 238 1.3E-142 T 14-10-2018 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 Gene3D G3DSA:3.30.300.10 18 275 1.3E-142 T 14-10-2018 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 Gene3D G3DSA:3.30.300.10 109 380 1.3E-142 T 14-10-2018 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 Pfam PF02772 S-adenosylmethionine synthetase, central domain 121 236 1.5E-31 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 PIRSF PIRSF000497 5 389 9.0E-145 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 122 132 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 SUPERFAMILY SSF55973 10 117 4.71E-32 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 SUPERFAMILY SSF55973 117 237 1.61E-37 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 11 107 1.4E-30 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 13 381 4.7E-135 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 SUPERFAMILY SSF55973 238 384 7.06E-60 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 238 378 7.3E-60 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_00035 f4ae449e451b4f7a29312aa960816bad 392 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 264 272 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 423 1.8E-46 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 Pfam PF13361 UvrD-like helicase C-terminal domain 440 820 2.9E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 Gene3D G3DSA:3.40.50.300 5 180 1.6E-27 T 14-10-2018 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 Gene3D G3DSA:3.40.50.300 311 461 1.0E-28 T 14-10-2018 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 Gene3D G3DSA:3.40.50.300 725 852 3.1E-20 T 14-10-2018 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 Gene3D G3DSA:3.40.50.300 522 623 1.0E-10 T 14-10-2018 P029_01090 c3c0ad7d77a7f04f9589cce55c494248 864 SUPERFAMILY SSF52540 10 825 1.16E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03315 9e8428de7eafe53c12b1e5283723db03 209 Pfam PF01227 GTP cyclohydrolase I 27 206 1.3E-56 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_03315 9e8428de7eafe53c12b1e5283723db03 209 Gene3D G3DSA:1.10.286.10 21 68 2.8E-15 T 14-10-2018 P029_03315 9e8428de7eafe53c12b1e5283723db03 209 SUPERFAMILY SSF55620 21 207 2.82E-59 T 14-10-2018 P029_03315 9e8428de7eafe53c12b1e5283723db03 209 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 131 141 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_03315 9e8428de7eafe53c12b1e5283723db03 209 Gene3D G3DSA:3.30.1130.10 76 209 2.1E-43 T 14-10-2018 P029_03315 9e8428de7eafe53c12b1e5283723db03 209 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 22 208 29.6 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_03315 9e8428de7eafe53c12b1e5283723db03 209 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 83 99 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_05090 83c2e5ffb83156ac153d0561fbb31296 154 Gene3D G3DSA:3.40.390.30 4 154 4.1E-35 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 P029_05090 83c2e5ffb83156ac153d0561fbb31296 154 SUPERFAMILY SSF55486 11 151 4.39E-36 T 14-10-2018 P029_05090 83c2e5ffb83156ac153d0561fbb31296 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 143 1.0E-28 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 P029_05090 83c2e5ffb83156ac153d0561fbb31296 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site P029_05090 83c2e5ffb83156ac153d0561fbb31296 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 148 18.987 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 P029_05090 83c2e5ffb83156ac153d0561fbb31296 154 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 3.3E-30 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 P029_05375 e71576c060f3318603767ca5d66c7f06 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 4.4E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 4.4E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 4.4E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 4.4E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 4.4E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 SUPERFAMILY SSF55681 244 528 2.49E-97 T 14-10-2018 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Gene3D G3DSA:3.30.54.20 133 188 9.7E-42 T 14-10-2018 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 531 3.1E-46 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_05375 e71576c060f3318603767ca5d66c7f06 640 SMART SM00863 171 220 6.4E-11 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Gene3D G3DSA:3.30.930.10 223 533 7.0E-125 T 14-10-2018 P029_05375 e71576c060f3318603767ca5d66c7f06 640 SUPERFAMILY SSF55186 70 242 2.22E-43 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Pfam PF03129 Anticodon binding domain 546 630 2.2E-11 T 14-10-2018 IPR004154 Anticodon-binding P029_05375 e71576c060f3318603767ca5d66c7f06 640 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 636 30.85 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Gene3D G3DSA:3.30.980.10 72 222 9.7E-42 T 14-10-2018 P029_05375 e71576c060f3318603767ca5d66c7f06 640 SUPERFAMILY SSF52954 531 634 2.87E-21 T 14-10-2018 P029_05375 e71576c060f3318603767ca5d66c7f06 640 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 631 9.8E-199 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 186 219 5.3E-5 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P029_05375 e71576c060f3318603767ca5d66c7f06 640 Gene3D G3DSA:3.40.50.800 534 639 1.4E-21 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 SUPERFAMILY SSF63380 1 91 5.36E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 Gene3D G3DSA:2.40.30.20 104 202 1.4E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 PIRSF PIRSF000498 1 201 1.2E-63 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 Pfam PF00677 Lumazine binding domain 102 186 1.2E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 Pfam PF00677 Lumazine binding domain 4 87 5.2E-15 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 6.7E-56 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 Gene3D G3DSA:2.40.30.20 1 90 8.4E-22 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_00485 1e100d355c6d0db103c7cc4f14680b8f 203 SUPERFAMILY SSF63380 96 197 4.85E-31 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 754 9.0E-17 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Pfam PF04997 RNA polymerase Rpb1, domain 1 14 343 9.5E-74 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:1.10.132.30 641 781 8.2E-62 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 18 1011 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Pfam PF04998 RNA polymerase Rpb1, domain 5 757 1306 5.8E-69 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:1.10.274.100 491 560 2.2E-17 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 SUPERFAMILY SSF64484 15 1354 0.0 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:2.40.50.100 939 1013 2.2E-20 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 SMART SM00663 235 515 8.6E-160 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:1.10.274.100 561 640 3.6E-15 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:1.10.40.90 375 417 1.5E-18 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 644 1.6E-24 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 410 486 4.8E-26 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 395 3.8E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:2.40.50.100 1014 1115 1.6E-28 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:1.10.1790.20 1124 1305 1.2E-61 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:2.40.50.100 1140 1206 1.2E-61 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Gene3D G3DSA:1.10.150.390 1307 1367 4.4E-27 T 14-10-2018 P029_04115 4f25966a184f73b1d72ed8665b273745 1409 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 9 1368 17.71 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_04910 93e0d359e890ff34e68ccf9ab449d204 181 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 72 4.2E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P029_04910 93e0d359e890ff34e68ccf9ab449d204 181 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 175 4.9E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 P029_04910 93e0d359e890ff34e68ccf9ab449d204 181 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 50 72 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P029_04910 93e0d359e890ff34e68ccf9ab449d204 181 PIRSF PIRSF000847 1 181 3.2E-44 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 P029_04910 93e0d359e890ff34e68ccf9ab449d204 181 Gene3D G3DSA:1.20.120.1760 1 176 1.7E-13 T 14-10-2018 P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 Gene3D G3DSA:3.40.50.300 117 313 8.3E-60 T 14-10-2018 P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 TIGRFAM TIGR00595 priA: primosomal protein N' 153 655 6.3E-171 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 SMART SM00490 428 523 4.7E-9 T 14-10-2018 IPR001650 Helicase, C-terminal P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 SMART SM00487 126 326 6.4E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 Pfam PF00270 DEAD/DEAH box helicase 134 299 1.8E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 SUPERFAMILY SSF52540 147 533 2.4E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 657 21.799 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 Pfam PF00271 Helicase conserved C-terminal domain 440 522 1.1E-8 T 14-10-2018 IPR001650 Helicase, C-terminal P029_01550 d3847ba9758b0b8593fbdf7255b37a4c 658 Gene3D G3DSA:1.10.8.630 1 104 4.9E-21 T 14-10-2018 P029_02940 66aba3fbf8d1c31c58db272f4a847586 340 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 213 226 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02940 66aba3fbf8d1c31c58db272f4a847586 340 Pfam PF00146 NADH dehydrogenase 6 325 2.3E-122 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02940 66aba3fbf8d1c31c58db272f4a847586 340 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 2 332 23.947 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02940 66aba3fbf8d1c31c58db272f4a847586 340 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 44 59 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00575 b3ebfe91efba4aa52066470807eff0fd 148 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 1 129 2.6E-32 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P029_03075 bccea27d8325b92eb22edfbb6286d9bb 491 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 15 480 1.7E-160 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P029_03075 bccea27d8325b92eb22edfbb6286d9bb 491 ProSitePatterns PS00571 Amidases signature. 156 187 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 P029_03075 bccea27d8325b92eb22edfbb6286d9bb 491 Pfam PF01425 Amidase 26 470 1.5E-130 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P029_03075 bccea27d8325b92eb22edfbb6286d9bb 491 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 13 482 82.335 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P029_03075 bccea27d8325b92eb22edfbb6286d9bb 491 SUPERFAMILY SSF75304 4 482 4.32E-140 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P029_03075 bccea27d8325b92eb22edfbb6286d9bb 491 Gene3D G3DSA:3.90.1300.10 5 484 1.2E-167 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 Pfam PF00448 SRP54-type protein, GTPase domain 100 294 2.6E-65 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 Pfam PF02881 SRP54-type protein, helical bundle domain 5 80 2.7E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 SUPERFAMILY SSF47364 1 93 7.59E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 SMART SM00963 1 86 2.9E-23 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 Gene3D G3DSA:1.10.260.30 311 441 1.5E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 Pfam PF02978 Signal peptide binding domain 326 426 4.1E-28 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 SMART SM00962 100 295 1.2E-97 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 SUPERFAMILY SSF47446 297 429 1.07E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 SUPERFAMILY SSF52540 96 297 4.3E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01515 c535d59604e10619b4ca9bd294e102aa 449 SMART SM00382 99 246 6.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01515 c535d59604e10619b4ca9bd294e102aa 449 Gene3D G3DSA:1.20.120.140 5 305 5.8E-107 T 14-10-2018 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 427 3.2E-154 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 P029_01515 c535d59604e10619b4ca9bd294e102aa 449 Gene3D G3DSA:3.40.50.300 90 284 5.8E-107 T 14-10-2018 P029_02340 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50104 6 63 8.42E-16 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily P029_02340 97545f35ab08ac10f565657add754315 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 122 1.5E-16 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 P029_02340 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.30.30.30 5 63 7.0E-19 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 P029_02340 97545f35ab08ac10f565657add754315 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 186 1.8E-65 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 P029_02340 97545f35ab08ac10f565657add754315 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.3E-20 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 P029_02340 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50249 129 186 6.17E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_02340 97545f35ab08ac10f565657add754315 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site P029_02340 97545f35ab08ac10f565657add754315 188 Hamap MF_00141 Elongation factor P [efp]. 2 186 39.834 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 P029_02340 97545f35ab08ac10f565657add754315 188 PIRSF PIRSF005901 1 187 2.8E-61 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP P029_02340 97545f35ab08ac10f565657add754315 188 SMART SM00841 130 185 1.3E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 P029_02340 97545f35ab08ac10f565657add754315 188 SMART SM01185 68 122 1.1E-18 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 P029_02340 97545f35ab08ac10f565657add754315 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 58 1.2E-20 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like P029_02340 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.40.50.140 65 128 4.7E-17 T 14-10-2018 P029_02340 97545f35ab08ac10f565657add754315 188 Gene3D G3DSA:2.40.50.140 129 187 1.0E-19 T 14-10-2018 P029_02340 97545f35ab08ac10f565657add754315 188 SUPERFAMILY SSF50249 66 127 9.42E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 SUPERFAMILY SSF52949 20 159 5.83E-15 T 14-10-2018 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 340 347 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 179 487 3.2E-119 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 23 137 2.9E-8 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 PRINTS PR00481 Cytosol aminopeptidase signature 277 298 2.6E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 PRINTS PR00481 Cytosol aminopeptidase signature 314 335 2.6E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 2.6E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 PRINTS PR00481 Cytosol aminopeptidase signature 255 272 2.6E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 PRINTS PR00481 Cytosol aminopeptidase signature 336 356 2.6E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 Gene3D G3DSA:3.40.220.10 7 162 9.0E-16 T 14-10-2018 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 SUPERFAMILY SSF53187 175 494 2.35E-115 T 14-10-2018 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 Gene3D G3DSA:3.40.630.10 163 497 4.0E-126 T 14-10-2018 P029_00990 8bf025fe8054e6c60f192a699a9a4ed8 506 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 7 496 32.492 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 ProSitePatterns PS00449 ATP synthase a subunit signature. 155 164 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 8 222 1.0E-58 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 206 221 2.9E-29 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 71 87 2.9E-29 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 152 174 2.9E-29 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 PRINTS PR00123 ATP synthase A subunit signature 132 147 2.9E-29 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 Gene3D G3DSA:1.20.120.220 65 226 3.8E-34 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 Hamap MF_01393 ATP synthase subunit a [atpB]. 5 226 14.452 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 SUPERFAMILY SSF81336 67 220 2.35E-42 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04845 0fa66a9fec9399febd26da88139bb0d0 226 Pfam PF00119 ATP synthase A chain 14 220 7.6E-51 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Gene3D G3DSA:3.30.930.10 486 684 3.0E-46 T 14-10-2018 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Pfam PF03484 tRNA synthetase B5 domain 403 468 1.2E-15 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Gene3D G3DSA:2.40.50.140 38 154 5.3E-50 T 14-10-2018 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SUPERFAMILY SSF50249 43 193 1.69E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 782 35.61 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SUPERFAMILY SSF46955 401 472 2.2E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SUPERFAMILY SSF54991 696 788 1.31E-19 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 788 1.1E-207 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 788 4.1E-19 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Pfam PF03483 B3/4 domain 215 383 1.2E-52 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Gene3D G3DSA:3.30.70.380 698 788 4.2E-20 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Gene3D G3DSA:3.30.56.10 5 181 5.3E-50 T 14-10-2018 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SMART SM00873 210 383 1.1E-63 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SUPERFAMILY SSF55681 464 681 5.47E-41 T 14-10-2018 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Gene3D G3DSA:3.30.56.10 398 471 2.6E-18 T 14-10-2018 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SUPERFAMILY SSF56037 216 396 9.94E-55 T 14-10-2018 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SMART SM00874 399 468 6.3E-22 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 SMART SM00896 697 788 9.3E-29 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Pfam PF01588 Putative tRNA binding domain 44 141 1.2E-18 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 P029_01320 778ada0e0a3052aa6bb759dcbc1a1e9d 792 Gene3D G3DSA:3.50.40.10 209 393 3.1E-55 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Gene3D G3DSA:3.30.1330.10 255 431 2.4E-43 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Pfam PF02769 AIR synthase related protein, C-terminal domain 848 966 1.7E-5 T 14-10-2018 IPR010918 PurM-like, C-terminal domain P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Pfam PF02769 AIR synthase related protein, C-terminal domain 445 593 8.4E-21 T 14-10-2018 IPR010918 PurM-like, C-terminal domain P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Gene3D G3DSA:3.30.1330.10 621 814 1.0E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Gene3D G3DSA:3.90.650.10 432 615 1.4E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 SUPERFAMILY SSF55326 232 431 4.88E-38 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 SUPERFAMILY SSF55326 632 819 1.05E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 SUPERFAMILY SSF56042 826 985 2.09E-22 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 212 1001 178.831 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Pfam PF00586 AIR synthase related protein, N-terminal domain 311 429 1.1E-11 T 14-10-2018 IPR016188 PurM-like, N-terminal domain P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Pfam PF00586 AIR synthase related protein, N-terminal domain 707 793 0.0042 T 14-10-2018 IPR016188 PurM-like, N-terminal domain P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 Gene3D G3DSA:3.90.650.10 822 991 4.6E-24 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00905 f303e7d30850a77f32e7376cd4d256cb 1001 SUPERFAMILY SSF56042 443 660 1.18E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_01275 265102eb1de382fc4cded2587db2b53e 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 8 121 1.0E-28 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01275 265102eb1de382fc4cded2587db2b53e 121 SUPERFAMILY SSF53137 8 118 1.07E-34 T 14-10-2018 P029_01275 265102eb1de382fc4cded2587db2b53e 121 Gene3D G3DSA:3.30.420.100 5 121 1.1E-30 T 14-10-2018 P029_01275 265102eb1de382fc4cded2587db2b53e 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 9 121 5.5E-26 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01275 265102eb1de382fc4cded2587db2b53e 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 121 22.356 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_02010 0e9ecfb3ea419e2b87b18d5e0e421192 112 Pfam PF02637 GatB domain 5 92 8.8E-17 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 P029_02010 0e9ecfb3ea419e2b87b18d5e0e421192 112 Gene3D G3DSA:1.10.10.410 53 95 2.4E-10 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal P029_02010 0e9ecfb3ea419e2b87b18d5e0e421192 112 Gene3D G3DSA:1.10.150.380 2 33 7.0E-5 T 14-10-2018 P029_02010 0e9ecfb3ea419e2b87b18d5e0e421192 112 SUPERFAMILY SSF89095 6 92 2.25E-9 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 SMART SM00861 4 179 9.9E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 1.3E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 Pfam PF02780 Transketolase, C-terminal domain 197 319 6.2E-42 T 14-10-2018 IPR033248 Transketolase, C-terminal domain P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 Gene3D G3DSA:3.40.50.970 3 194 5.0E-85 T 14-10-2018 P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 SUPERFAMILY SSF52518 3 185 6.87E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 SUPERFAMILY SSF52922 193 329 1.83E-44 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P029_05170 c99af7f946ca9ef34ca200af1e5e9527 332 Gene3D G3DSA:3.40.50.920 195 329 3.4E-49 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P029_03010 df18b1128c1aadae9589eedc4cfc64db 395 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 11 395 3.0E-178 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03010 df18b1128c1aadae9589eedc4cfc64db 395 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 395 48.736 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03010 df18b1128c1aadae9589eedc4cfc64db 395 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 48 59 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03010 df18b1128c1aadae9589eedc4cfc64db 395 SUPERFAMILY SSF56762 21 395 8.11E-141 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03010 df18b1128c1aadae9589eedc4cfc64db 395 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 125 395 3.6E-124 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03010 df18b1128c1aadae9589eedc4cfc64db 395 Gene3D G3DSA:1.10.645.20 9 395 7.3E-179 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00315 19ea9bfdb0cb74b9ea648ccef029836b 69 Pfam PF02597 ThiS family 8 69 3.4E-9 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 P029_00315 19ea9bfdb0cb74b9ea648ccef029836b 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 7 69 6.3E-16 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis P029_00315 19ea9bfdb0cb74b9ea648ccef029836b 69 Gene3D G3DSA:3.10.20.30 5 69 9.2E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily P029_00315 19ea9bfdb0cb74b9ea648ccef029836b 69 SUPERFAMILY SSF54285 5 69 8.43E-13 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Gene3D G3DSA:3.30.420.10 303 466 2.4E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 167 3.0E-46 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 ProSitePatterns PS00447 DNA polymerase family A signature. 678 697 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 TIGRFAM TIGR00593 pola: DNA polymerase I 7 847 1.0E-262 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Pfam PF00476 DNA polymerase family A 474 846 1.3E-137 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SMART SM00279 170 205 8.3E-12 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Gene3D G3DSA:1.20.1060.10 467 583 5.3E-34 T 14-10-2018 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 168 261 1.2E-26 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Gene3D G3DSA:1.10.150.20 634 776 1.5E-101 T 14-10-2018 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Gene3D G3DSA:3.30.70.370 587 844 1.5E-101 T 14-10-2018 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SUPERFAMILY SSF88723 3 167 1.01E-49 T 14-10-2018 IPR029060 PIN-like domain superfamily P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SMART SM00482 611 812 2.6E-93 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Gene3D G3DSA:1.10.150.20 171 244 2.1E-86 T 14-10-2018 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SUPERFAMILY SSF53098 308 420 4.55E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SUPERFAMILY SSF47807 169 282 1.17E-27 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SUPERFAMILY SSF56672 449 847 2.0E-137 T 14-10-2018 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 SMART SM00475 3 259 1.5E-106 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 625 648 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 769 785 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 580 602 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 703 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 715 726 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 618 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 668 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 PRINTS PR00868 DNA-polymerase family A (pol I) signature 737 748 2.7E-63 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_00005 62d734f6f42914e8c4580765ae9db6d9 852 Gene3D G3DSA:3.40.50.1010 7 275 2.1E-86 T 14-10-2018 P029_00340 aa274771d69e08e04fdacd3bb58f5f7a 393 Gene3D G3DSA:1.10.4030.30 25 263 3.6E-16 T 14-10-2018 P029_00340 aa274771d69e08e04fdacd3bb58f5f7a 393 Pfam PF13624 SurA N-terminal domain 48 135 1.1E-6 T 14-10-2018 P029_00340 aa274771d69e08e04fdacd3bb58f5f7a 393 SUPERFAMILY SSF109998 26 179 4.71E-18 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily P029_00340 aa274771d69e08e04fdacd3bb58f5f7a 393 Gene3D G3DSA:3.10.50.40 165 255 3.6E-16 T 14-10-2018 P029_03925 b3cc6c9f3007b560040f5f779d5ae878 243 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_03925 b3cc6c9f3007b560040f5f779d5ae878 243 Gene3D G3DSA:3.40.50.300 15 241 2.5E-49 T 14-10-2018 P029_03925 b3cc6c9f3007b560040f5f779d5ae878 243 SUPERFAMILY SSF52540 23 235 8.56E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03925 b3cc6c9f3007b560040f5f779d5ae878 243 SMART SM00382 49 221 5.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_03925 b3cc6c9f3007b560040f5f779d5ae878 243 Pfam PF00005 ABC transporter 41 170 4.5E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 33.66 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 Pfam PF00252 Ribosomal protein L16p/L10e 5 133 1.0E-44 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 59 88 3.5E-34 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 25 37 3.5E-34 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 89 118 3.5E-34 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 PRINTS PR00060 Ribosomal protein L16 signature 43 54 3.5E-34 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 4 128 6.3E-51 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 Gene3D G3DSA:3.90.1170.10 2 136 2.7E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 P029_01230 ecf6a48c2ef9cb65eb36b86a415b6942 137 SUPERFAMILY SSF54686 3 135 1.02E-50 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Pfam PF03461 TRCF domain 989 1072 6.3E-24 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SUPERFAMILY SSF52540 9 326 4.12E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Gene3D G3DSA:3.30.2060.10 122 209 6.4E-63 T 14-10-2018 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SMART SM00490 804 891 2.2E-16 T 14-10-2018 IPR001650 Helicase, C-terminal P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Pfam PF00271 Helicase conserved C-terminal domain 785 890 7.1E-16 T 14-10-2018 IPR001650 Helicase, C-terminal P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Pfam PF02559 CarD-like/TRCF domain 463 553 3.7E-20 T 14-10-2018 IPR003711 CarD-like/TRCF domain P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Gene3D G3DSA:3.40.50.300 523 762 4.4E-197 T 14-10-2018 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 6 1086 24.877 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SUPERFAMILY SSF52540 353 457 2.25E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SMART SM00487 580 770 3.3E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SMART SM01058 462 557 3.2E-32 T 14-10-2018 IPR003711 CarD-like/TRCF domain P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Gene3D G3DSA:3.40.50.11180 20 295 6.4E-63 T 14-10-2018 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SUPERFAMILY SSF141259 455 522 6.15E-18 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SMART SM00982 987 1087 5.9E-33 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Gene3D G3DSA:3.40.50.300 461 970 4.4E-197 T 14-10-2018 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SUPERFAMILY SSF143517 981 1102 2.62E-29 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Gene3D G3DSA:3.90.1150.50 983 1125 3.2E-27 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 139 1060 2.1E-280 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Gene3D G3DSA:2.30.30.840 466 522 4.4E-197 T 14-10-2018 P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 SUPERFAMILY SSF52540 636 903 2.4E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00490 6af61c9e25263f24e1e6380d0ecfd0a4 1138 Pfam PF00270 DEAD/DEAH box helicase 588 745 4.6E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P029_00695 7ebde4c55e66f714546c966ef370e670 262 SUPERFAMILY SSF46548 131 258 1.69E-38 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P029_00695 7ebde4c55e66f714546c966ef370e670 262 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 253 4.4E-83 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00695 7ebde4c55e66f714546c966ef370e670 262 SUPERFAMILY SSF54292 28 129 5.85E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P029_00695 7ebde4c55e66f714546c966ef370e670 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P029_00695 7ebde4c55e66f714546c966ef370e670 262 Gene3D G3DSA:1.10.1060.10 130 261 2.0E-59 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P029_00695 7ebde4c55e66f714546c966ef370e670 262 Gene3D G3DSA:3.10.20.30 19 129 2.3E-42 T 14-10-2018 IPR012675 Beta-grasp domain superfamily P029_00695 7ebde4c55e66f714546c966ef370e670 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 7.0E-9 T 14-10-2018 P029_00695 7ebde4c55e66f714546c966ef370e670 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 6.9E-32 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00695 7ebde4c55e66f714546c966ef370e670 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 P029_00685 7ebde4c55e66f714546c966ef370e670 262 SUPERFAMILY SSF46548 131 258 1.69E-38 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P029_00685 7ebde4c55e66f714546c966ef370e670 262 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 253 4.4E-83 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00685 7ebde4c55e66f714546c966ef370e670 262 SUPERFAMILY SSF54292 28 129 5.85E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P029_00685 7ebde4c55e66f714546c966ef370e670 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 172 183 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P029_00685 7ebde4c55e66f714546c966ef370e670 262 Gene3D G3DSA:1.10.1060.10 130 261 2.0E-59 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 P029_00685 7ebde4c55e66f714546c966ef370e670 262 Gene3D G3DSA:3.10.20.30 19 129 2.3E-42 T 14-10-2018 IPR012675 Beta-grasp domain superfamily P029_00685 7ebde4c55e66f714546c966ef370e670 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 7.0E-9 T 14-10-2018 P029_00685 7ebde4c55e66f714546c966ef370e670 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 134 6.9E-32 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00685 7ebde4c55e66f714546c966ef370e670 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 P029_05020 169a6eb2ebcd19e46973bb19422ba83e 300 Gene3D G3DSA:3.20.20.70 18 300 1.8E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_05020 169a6eb2ebcd19e46973bb19422ba83e 300 Pfam PF01791 DeoC/LacD family aldolase 41 283 5.6E-29 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 P029_05020 169a6eb2ebcd19e46973bb19422ba83e 300 SMART SM01133 40 283 2.8E-43 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 P029_05020 169a6eb2ebcd19e46973bb19422ba83e 300 PIRSF PIRSF038992 20 298 8.3E-58 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 P029_05020 169a6eb2ebcd19e46973bb19422ba83e 300 SUPERFAMILY SSF51569 34 299 2.38E-62 T 14-10-2018 P029_05530 4494ed729baff9db4b66196493a6b89a 456 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 229 362 4.2E-21 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 P029_05530 4494ed729baff9db4b66196493a6b89a 456 SUPERFAMILY SSF48019 241 358 7.14E-9 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 P029_05530 4494ed729baff9db4b66196493a6b89a 456 Gene3D G3DSA:1.10.8.60 6 236 2.6E-87 T 14-10-2018 P029_05530 4494ed729baff9db4b66196493a6b89a 456 SUPERFAMILY SSF52540 32 224 7.8E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05530 4494ed729baff9db4b66196493a6b89a 456 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 2 349 5.7E-111 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 P029_05530 4494ed729baff9db4b66196493a6b89a 456 SMART SM00382 34 176 2.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_05530 4494ed729baff9db4b66196493a6b89a 456 Pfam PF13177 DNA polymerase III, delta subunit 18 175 2.4E-33 T 14-10-2018 P029_05530 4494ed729baff9db4b66196493a6b89a 456 Gene3D G3DSA:3.40.50.300 10 174 2.6E-87 T 14-10-2018 P029_00835 c595389026de0260a540613654b7a54d 465 SUPERFAMILY SSF52540 150 396 5.61E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00835 c595389026de0260a540613654b7a54d 465 SUPERFAMILY SSF46689 365 462 3.45E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 P029_00835 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:1.10.8.60 325 403 2.5E-16 T 14-10-2018 P029_00835 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:3.40.50.300 137 323 2.7E-39 T 14-10-2018 P029_00835 c595389026de0260a540613654b7a54d 465 SUPERFAMILY SSF52172 14 194 1.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily P029_00835 c595389026de0260a540613654b7a54d 465 SMART SM00448 13 126 1.4E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_00835 c595389026de0260a540613654b7a54d 465 Pfam PF02954 Bacterial regulatory protein, Fis family 420 458 3.3E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 P029_00835 c595389026de0260a540613654b7a54d 465 SMART SM00382 171 316 1.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00835 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:3.40.50.2300 14 133 1.3E-33 T 14-10-2018 P029_00835 c595389026de0260a540613654b7a54d 465 Gene3D G3DSA:1.10.10.60 409 463 1.0E-14 T 14-10-2018 P029_00835 c595389026de0260a540613654b7a54d 465 Pfam PF00072 Response regulator receiver domain 15 126 5.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_00835 c595389026de0260a540613654b7a54d 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 365 374 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site P029_00835 c595389026de0260a540613654b7a54d 465 Pfam PF00158 Sigma-54 interaction domain 151 318 1.0E-34 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 P029_04525 11df4b165e8ea2f57affa927a29ba93c 96 Pfam PF01617 Surface antigen 8 88 1.2E-23 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00590 27d55e9776255dad062b5577eb241026 700 Pfam PF00512 His Kinase A (phospho-acceptor) domain 483 550 1.2E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P029_00590 27d55e9776255dad062b5577eb241026 700 SMART SM00387 592 700 7.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_00590 27d55e9776255dad062b5577eb241026 700 SUPERFAMILY SSF55874 572 697 1.88E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_00590 27d55e9776255dad062b5577eb241026 700 SMART SM00304 309 364 1.9E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 P029_00590 27d55e9776255dad062b5577eb241026 700 Gene3D G3DSA:1.10.287.130 471 549 6.3E-11 T 14-10-2018 P029_00590 27d55e9776255dad062b5577eb241026 700 Gene3D G3DSA:3.30.565.10 563 700 2.3E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_00590 27d55e9776255dad062b5577eb241026 700 SMART SM00388 481 552 8.8E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P029_00590 27d55e9776255dad062b5577eb241026 700 Gene3D G3DSA:1.20.1480.50 269 371 6.6E-6 T 14-10-2018 P029_00590 27d55e9776255dad062b5577eb241026 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 681 1.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_00590 27d55e9776255dad062b5577eb241026 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 662 1.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_00590 27d55e9776255dad062b5577eb241026 700 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 648 1.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_00590 27d55e9776255dad062b5577eb241026 700 SUPERFAMILY SSF47384 477 552 5.49E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P029_00590 27d55e9776255dad062b5577eb241026 700 PIRSF PIRSF037532 7 700 3.6E-173 T 14-10-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator P029_00590 27d55e9776255dad062b5577eb241026 700 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 593 694 9.4E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_05455 c1b35bb6a87c74d114500ab604f3740f 119 SUPERFAMILY SSF52980 8 115 1.72E-19 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 P029_05455 c1b35bb6a87c74d114500ab604f3740f 119 Gene3D G3DSA:3.40.1350.10 12 118 6.7E-21 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 P029_05455 c1b35bb6a87c74d114500ab604f3740f 119 Pfam PF02021 Uncharacterised protein family UPF0102 13 98 4.7E-12 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 P029_05330 ccdbc0a6cdad3376ae7b6131ad25ff8b 225 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 214 20.304 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 P029_05330 ccdbc0a6cdad3376ae7b6131ad25ff8b 225 PIRSF PIRSF006755 1 213 4.7E-36 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 P029_05330 ccdbc0a6cdad3376ae7b6131ad25ff8b 225 Pfam PF13500 AAA domain 3 198 3.8E-31 T 14-10-2018 P029_05330 ccdbc0a6cdad3376ae7b6131ad25ff8b 225 SUPERFAMILY SSF52540 3 213 1.59E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05330 ccdbc0a6cdad3376ae7b6131ad25ff8b 225 Gene3D G3DSA:3.40.50.300 2 211 5.4E-51 T 14-10-2018 P029_05330 ccdbc0a6cdad3376ae7b6131ad25ff8b 225 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 171 1.6E-33 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Pfam PF14450 Cell division protein FtsA 205 368 9.0E-18 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Gene3D G3DSA:3.30.1490.110 85 166 2.2E-81 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 PIRSF PIRSF003101 1 403 7.4E-96 T 14-10-2018 IPR020823 Cell division protein FtsA P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Gene3D G3DSA:3.30.420.40 194 345 2.2E-81 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Gene3D G3DSA:3.90.640.10 232 296 2.2E-81 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Hamap MF_02033 Cell division protein FtsA [ftsA]. 4 404 21.292 T 14-10-2018 IPR020823 Cell division protein FtsA P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 SMART SM00842 8 193 1.5E-59 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 SUPERFAMILY SSF53067 7 194 9.23E-36 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Gene3D G3DSA:3.30.420.40 11 364 2.2E-81 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 Pfam PF02491 SHS2 domain inserted in FTSA 86 159 8.0E-11 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 SUPERFAMILY SSF53067 195 371 2.21E-33 T 14-10-2018 P029_04810 6f336b5f70c47016c7eb87e002e0cd84 406 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 8 368 1.7E-83 T 14-10-2018 IPR020823 Cell division protein FtsA P029_00180 d45ca0b917a5e2a66b4b69dd30003221 225 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_00180 d45ca0b917a5e2a66b4b69dd30003221 225 SUPERFAMILY SSF52540 5 221 1.13E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00180 d45ca0b917a5e2a66b4b69dd30003221 225 Gene3D G3DSA:3.40.50.300 2 224 1.0E-57 T 14-10-2018 P029_00180 d45ca0b917a5e2a66b4b69dd30003221 225 SMART SM00382 31 220 9.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00180 d45ca0b917a5e2a66b4b69dd30003221 225 Pfam PF00005 ABC transporter 23 170 2.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 232 96.268 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 SUPERFAMILY SSF75217 1 227 1.18E-89 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 Gene3D G3DSA:3.40.1280.10 1 173 2.7E-69 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 PIRSF PIRSF000386 1 232 5.6E-89 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 Gene3D G3DSA:1.10.1270.20 174 232 2.7E-29 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 219 5.6E-54 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P029_05360 c4fafb0ff84aadcd13c2373a88c331d1 232 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 227 1.2E-77 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 9 459 43.709 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 SUPERFAMILY SSF53271 246 464 8.98E-66 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 Gene3D G3DSA:3.40.50.2020 271 437 2.6E-143 T 14-10-2018 P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 10 460 7.8E-142 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 Gene3D G3DSA:3.60.20.10 10 461 2.6E-143 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 SUPERFAMILY SSF56235 10 250 4.98E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 Pfam PF00156 Phosphoribosyl transferase domain 287 383 1.1E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 PIRSF PIRSF000485 6 467 2.7E-155 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 P029_05130 f40f40fb9e604f0f3d2e07ed9c6e9fdf 468 Pfam PF13537 Glutamine amidotransferase domain 89 208 1.3E-22 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain P029_01435 b39aad01fa5ad4ca234e2b109e2732b7 166 Gene3D G3DSA:3.30.420.140 16 159 2.6E-38 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 P029_01435 b39aad01fa5ad4ca234e2b109e2732b7 166 SUPERFAMILY SSF53098 17 149 2.88E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_01435 b39aad01fa5ad4ca234e2b109e2732b7 166 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 17 152 20.345 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 P029_01435 b39aad01fa5ad4ca234e2b109e2732b7 166 Pfam PF03652 Holliday junction resolvase 18 149 5.0E-36 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 P029_01435 b39aad01fa5ad4ca234e2b109e2732b7 166 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 20 149 2.3E-22 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 P029_01435 b39aad01fa5ad4ca234e2b109e2732b7 166 SMART SM00732 17 117 3.1E-24 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 PIRSF PIRSF000349 1 205 2.6E-72 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 196 1.2E-33 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 Gene3D G3DSA:2.40.500.20 92 205 2.3E-39 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 SUPERFAMILY SSF54719 90 202 2.75E-41 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 88 2.3E-22 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 1.1E-14 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 PRINTS PR01703 Manganese superoxide dismutase signature 24 37 1.1E-14 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 1.1E-14 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 PRINTS PR01703 Manganese superoxide dismutase signature 71 84 1.1E-14 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 Gene3D G3DSA:1.10.287.990 19 87 1.4E-17 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_01600 16b9cb5432a1a922fdcc80e05dbd9904 206 SUPERFAMILY SSF46609 1 89 6.94E-25 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 383 2.5E-147 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 Gene3D G3DSA:3.40.50.261 240 386 2.3E-53 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 SUPERFAMILY SSF52210 240 384 5.1E-50 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 SUPERFAMILY SSF56059 2 236 2.05E-70 T 14-10-2018 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 Pfam PF08442 ATP-grasp domain 2 203 6.4E-68 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 Gene3D G3DSA:3.30.1490.20 21 104 1.0E-81 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 PIRSF PIRSF001554 1 387 1.4E-137 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 Gene3D G3DSA:3.30.470.20 2 234 1.0E-81 T 14-10-2018 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 385 40.711 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04235 74c2f0260fb445d7e8fb1e89891e9771 388 Pfam PF00549 CoA-ligase 262 379 1.3E-18 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_02460 301f0b6525681b508354ca92e996ecc9 830 Pfam PF00512 His Kinase A (phospho-acceptor) domain 440 502 6.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P029_02460 301f0b6525681b508354ca92e996ecc9 830 SUPERFAMILY SSF52172 707 825 1.21E-25 T 14-10-2018 IPR011006 CheY-like superfamily P029_02460 301f0b6525681b508354ca92e996ecc9 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 658 671 6.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_02460 301f0b6525681b508354ca92e996ecc9 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 603 617 6.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_02460 301f0b6525681b508354ca92e996ecc9 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 631 6.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_02460 301f0b6525681b508354ca92e996ecc9 830 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 652 6.2E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_02460 301f0b6525681b508354ca92e996ecc9 830 Gene3D G3DSA:3.40.50.2300 704 830 8.6E-26 T 14-10-2018 P029_02460 301f0b6525681b508354ca92e996ecc9 830 Gene3D G3DSA:3.30.565.10 506 679 1.3E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_02460 301f0b6525681b508354ca92e996ecc9 830 Gene3D G3DSA:3.30.450.20 321 429 4.5E-5 T 14-10-2018 P029_02460 301f0b6525681b508354ca92e996ecc9 830 SUPERFAMILY SSF47384 430 501 1.9E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P029_02460 301f0b6525681b508354ca92e996ecc9 830 SUPERFAMILY SSF55874 494 674 7.47E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_02460 301f0b6525681b508354ca92e996ecc9 830 Gene3D G3DSA:1.10.287.130 430 503 1.6E-20 T 14-10-2018 P029_02460 301f0b6525681b508354ca92e996ecc9 830 Pfam PF00072 Response regulator receiver domain 709 820 1.7E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_02460 301f0b6525681b508354ca92e996ecc9 830 SMART SM00448 707 820 7.4E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_02460 301f0b6525681b508354ca92e996ecc9 830 SMART SM00388 438 504 1.3E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P029_02460 301f0b6525681b508354ca92e996ecc9 830 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 548 671 3.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_02460 301f0b6525681b508354ca92e996ecc9 830 SMART SM00387 545 674 1.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_00295 d17b189e64083e54e91b51840051f2ac 471 Gene3D G3DSA:3.50.50.60 5 326 4.8E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00295 d17b189e64083e54e91b51840051f2ac 471 SUPERFAMILY SSF55424 350 466 1.17E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PIRSF PIRSF000350 1 467 9.8E-76 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P029_00295 d17b189e64083e54e91b51840051f2ac 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 469 1.3E-154 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 P029_00295 d17b189e64083e54e91b51840051f2ac 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 2.5E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P029_00295 d17b189e64083e54e91b51840051f2ac 471 SUPERFAMILY SSF51905 1 336 8.15E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00295 d17b189e64083e54e91b51840051f2ac 471 Gene3D G3DSA:3.50.50.60 148 269 4.8E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00295 d17b189e64083e54e91b51840051f2ac 471 Gene3D G3DSA:3.30.390.30 352 471 1.8E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_00295 d17b189e64083e54e91b51840051f2ac 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 1.1E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-37 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 7.3E-37 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 7.3E-37 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.3E-37 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.3E-37 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.3E-67 T 14-10-2018 P029_00295 d17b189e64083e54e91b51840051f2ac 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 2.3E-67 T 14-10-2018 P029_03530 0fff802ff42f55d038634adc385c64e9 435 Gene3D G3DSA:1.20.1250.20 234 433 2.3E-5 T 14-10-2018 P029_03530 0fff802ff42f55d038634adc385c64e9 435 SUPERFAMILY SSF103473 35 433 9.55E-20 T 14-10-2018 IPR036259 MFS transporter superfamily P029_03530 0fff802ff42f55d038634adc385c64e9 435 Gene3D G3DSA:1.20.1250.20 33 233 3.2E-6 T 14-10-2018 P029_00560 90c67ee13fed6bdf1cd2f5a2410a4964 328 Pfam PF02628 Cytochrome oxidase assembly protein 7 317 8.3E-98 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 P029_00560 90c67ee13fed6bdf1cd2f5a2410a4964 328 Hamap MF_01665 Heme A synthase [ctaA]. 3 328 23.785 T 14-10-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 P029_03910 c179171f2bdf1bc4fbfb7d3c9b0e18d7 186 Pfam PF01617 Surface antigen 59 186 1.3E-36 T 14-10-2018 IPR002566 Surface antigen msp4 P029_03910 c179171f2bdf1bc4fbfb7d3c9b0e18d7 186 Gene3D G3DSA:2.40.160.20 15 147 3.5E-9 T 14-10-2018 P029_03910 c179171f2bdf1bc4fbfb7d3c9b0e18d7 186 SUPERFAMILY SSF56925 68 184 3.14E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_00510 4a937b9c7d7b7e41e1c2d33862129520 171 Gene3D G3DSA:1.10.132.20 1 169 1.2E-54 T 14-10-2018 P029_00510 4a937b9c7d7b7e41e1c2d33862129520 171 Gene3D G3DSA:3.30.1360.40 19 92 1.2E-54 T 14-10-2018 P029_00510 4a937b9c7d7b7e41e1c2d33862129520 171 TIGRFAM TIGR00496 frr: ribosome recycling factor 1 170 2.9E-51 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 P029_00510 4a937b9c7d7b7e41e1c2d33862129520 171 Pfam PF01765 Ribosome recycling factor 10 170 3.2E-49 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 P029_00510 4a937b9c7d7b7e41e1c2d33862129520 171 SUPERFAMILY SSF55194 1 170 1.44E-53 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 SUPERFAMILY SSF52943 2 284 1.27E-60 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 Pfam PF00231 ATP synthase 5 284 5.2E-59 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 Gene3D G3DSA:3.40.1380.10 27 243 5.4E-58 T 14-10-2018 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 PRINTS PR00126 ATP synthase gamma subunit signature 66 85 1.3E-24 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 PRINTS PR00126 ATP synthase gamma subunit signature 231 250 1.3E-24 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 PRINTS PR00126 ATP synthase gamma subunit signature 262 283 1.3E-24 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 PRINTS PR00126 ATP synthase gamma subunit signature 158 175 1.3E-24 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02920 d3e3bdacb4bb383686e1868af7bf2044 285 Gene3D G3DSA:1.10.287.80 5 283 5.4E-58 T 14-10-2018 P029_04310 f5770d13981620c5ed0735c3dac78a63 491 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 383 453 5.0E-6 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_04310 f5770d13981620c5ed0735c3dac78a63 491 SUPERFAMILY SSF52540 60 488 1.73E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04310 f5770d13981620c5ed0735c3dac78a63 491 Pfam PF07724 AAA domain (Cdc48 subfamily) 260 377 1.8E-34 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_04310 f5770d13981620c5ed0735c3dac78a63 491 SMART SM00382 103 380 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_04310 f5770d13981620c5ed0735c3dac78a63 491 SMART SM01086 383 477 5.0E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_04310 f5770d13981620c5ed0735c3dac78a63 491 Gene3D G3DSA:1.10.8.60 383 488 1.6E-39 T 14-10-2018 P029_04310 f5770d13981620c5ed0735c3dac78a63 491 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 58 491 4.0E-170 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 P029_04310 f5770d13981620c5ed0735c3dac78a63 491 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 107 175 1.8E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 SMART SM00936 273 363 1.5E-18 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 Gene3D G3DSA:2.60.410.10 273 362 1.1E-13 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 SUPERFAMILY SSF69189 273 362 4.71E-15 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 Gene3D G3DSA:3.40.710.10 22 271 1.5E-69 T 14-10-2018 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 249 1.5E-58 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 SUPERFAMILY SSF56601 7 272 9.9E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 3.2E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 3.2E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 3.2E-15 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 P029_04950 ac0e3dbaabc0e20ca61a6ef3838fb020 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 273 361 7.4E-13 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 P029_03775 f6d2942b321cea7f0d6e3a5311a834ec 386 Gene3D G3DSA:3.40.640.10 44 289 9.3E-124 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_03775 f6d2942b321cea7f0d6e3a5311a834ec 386 PIRSF PIRSF000521 7 170 1.4E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P029_03775 f6d2942b321cea7f0d6e3a5311a834ec 386 PIRSF PIRSF000521 155 385 6.8E-44 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P029_03775 f6d2942b321cea7f0d6e3a5311a834ec 386 SUPERFAMILY SSF53383 2 383 7.51E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_03775 f6d2942b321cea7f0d6e3a5311a834ec 386 Gene3D G3DSA:3.90.1150.10 10 375 9.3E-124 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_03775 f6d2942b321cea7f0d6e3a5311a834ec 386 Pfam PF00202 Aminotransferase class-III 9 379 5.5E-104 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P029_04445 c7aa3b578ecbc452d1b0b47d96b2be96 406 Gene3D G3DSA:1.20.1600.10 22 406 1.4E-62 T 14-10-2018 P029_04445 c7aa3b578ecbc452d1b0b47d96b2be96 406 Pfam PF02321 Outer membrane efflux protein 220 401 2.4E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P029_04445 c7aa3b578ecbc452d1b0b47d96b2be96 406 Pfam PF02321 Outer membrane efflux protein 24 194 3.3E-17 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 P029_04445 c7aa3b578ecbc452d1b0b47d96b2be96 406 SUPERFAMILY SSF56954 1 403 1.83E-58 T 14-10-2018 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 ProSitePatterns PS01244 Aconitase family signature 2. 472 485 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 20 868 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 Gene3D G3DSA:3.30.499.20 6 367 3.6E-150 T 14-10-2018 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 Gene3D G3DSA:1.10.1440.20 570 630 1.5E-15 T 14-10-2018 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 Pfam PF00330 Aconitase family (aconitate hydratase) 79 541 2.5E-167 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 ProSitePatterns PS00450 Aconitase family signature 1. 406 422 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 275 288 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 213 228 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 367 381 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 472 485 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 289 302 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 170 178 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 199 212 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 146 159 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 PRINTS PR00415 Aconitase family signature 410 421 3.0E-39 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 SUPERFAMILY SSF52016 610 868 2.35E-75 T 14-10-2018 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 Pfam PF00694 Aconitase C-terminal domain 675 802 1.1E-44 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 SUPERFAMILY SSF53732 5 604 4.58E-206 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 Gene3D G3DSA:3.20.19.10 639 870 3.6E-94 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 P029_04495 cb668926a1ba83ee4187d8b8d0ddf487 873 Gene3D G3DSA:3.30.499.10 368 569 4.8E-85 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 15.719 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 43 102 2.1E-17 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 Gene3D G3DSA:2.30.30.30 1 104 3.9E-28 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 SUPERFAMILY SSF50104 3 102 1.02E-24 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 102 2.8E-27 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 SMART SM00739 3 30 0.0021 T 14-10-2018 IPR005824 KOW P029_01250 f94ccfd93ec7d2feed9da4eaab19ae08 104 Pfam PF00467 KOW motif 7 36 2.2E-6 T 14-10-2018 IPR005824 KOW P029_01185 46375f87d76e267048cf611f50aaf159 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 178 3.4E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 8.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 SUPERFAMILY SSF50465 302 393 2.88E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal P029_01185 46375f87d76e267048cf611f50aaf159 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.422 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_01185 46375f87d76e267048cf611f50aaf159 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 Gene3D G3DSA:3.40.50.300 1 202 1.6E-63 T 14-10-2018 P029_01185 46375f87d76e267048cf611f50aaf159 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 1.7E-30 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal P029_01185 46375f87d76e267048cf611f50aaf159 393 Gene3D G3DSA:2.40.30.10 205 333 4.0E-50 T 14-10-2018 P029_01185 46375f87d76e267048cf611f50aaf159 393 SUPERFAMILY SSF52540 5 225 3.16E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01185 46375f87d76e267048cf611f50aaf159 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site P029_01185 46375f87d76e267048cf611f50aaf159 393 Gene3D G3DSA:2.40.30.10 337 392 1.4E-26 T 14-10-2018 P029_01185 46375f87d76e267048cf611f50aaf159 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 143 8.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_01185 46375f87d76e267048cf611f50aaf159 393 SUPERFAMILY SSF50447 204 298 1.75E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_01185 46375f87d76e267048cf611f50aaf159 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 5 393 1.2E-201 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_05265 f11a11f6651448aa9635165296878829 413 Pfam PF01617 Surface antigen 27 413 5.7E-80 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05265 f11a11f6651448aa9635165296878829 413 SUPERFAMILY SSF56925 27 374 2.88E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05265 f11a11f6651448aa9635165296878829 413 Gene3D G3DSA:2.40.160.20 214 378 7.6E-10 T 14-10-2018 P029_01755 f33bea1ecd92d41f2161139d60ba1847 408 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 276 377 2.2E-41 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 P029_01755 f33bea1ecd92d41f2161139d60ba1847 408 Gene3D G3DSA:1.20.810.10 4 407 2.5E-167 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 P029_01755 f33bea1ecd92d41f2161139d60ba1847 408 PIRSF PIRSF038885 8 407 2.9E-194 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 P029_01755 f33bea1ecd92d41f2161139d60ba1847 408 Pfam PF00033 Cytochrome b/b6/petB 34 220 3.6E-79 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 P029_01755 f33bea1ecd92d41f2161139d60ba1847 408 SUPERFAMILY SSF81342 18 278 2.98E-108 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 P029_01755 f33bea1ecd92d41f2161139d60ba1847 408 SUPERFAMILY SSF81648 279 396 1.68E-43 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SUPERFAMILY SSF54211 464 584 6.57E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SUPERFAMILY SSF50447 249 389 4.62E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SUPERFAMILY SSF52540 1 266 8.06E-103 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SUPERFAMILY SSF54980 387 465 2.7E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Gene3D G3DSA:3.30.70.870 391 468 1.8E-29 T 14-10-2018 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Gene3D G3DSA:2.40.30.10 277 390 6.2E-41 T 14-10-2018 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Pfam PF00679 Elongation factor G C-terminus 585 668 6.8E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Pfam PF03764 Elongation factor G, domain IV 464 582 9.4E-41 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 PRINTS PR00315 GTP-binding elongation factor signature 115 124 2.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 PRINTS PR00315 GTP-binding elongation factor signature 63 73 2.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 PRINTS PR00315 GTP-binding elongation factor signature 79 90 2.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 PRINTS PR00315 GTP-binding elongation factor signature 43 51 2.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Gene3D G3DSA:3.40.50.300 1 276 4.2E-107 T 14-10-2018 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SUPERFAMILY SSF54980 585 669 1.06E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 670 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Pfam PF00009 Elongation factor Tu GTP binding domain 1 266 2.7E-65 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 165 4.3E-32 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Pfam PF14492 Elongation Factor G, domain II 389 462 9.8E-31 T 14-10-2018 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SMART SM00889 465 583 7.2E-61 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Pfam PF03144 Elongation factor Tu domain 2 309 376 1.2E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 SMART SM00838 585 673 2.2E-46 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 36 51 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Gene3D G3DSA:3.30.70.240 589 659 1.8E-83 T 14-10-2018 P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Gene3D G3DSA:3.30.230.10 469 668 1.8E-83 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_04165 4c9633a9351a00e2ef5d481cde16c1d7 675 Hamap MF_00054_B Elongation factor G [fusA]. 1 673 104.118 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 390 626 9.2E-114 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Pfam PF04546 Sigma-70, non-essential region 139 361 1.4E-24 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 SUPERFAMILY SSF88659 525 624 2.62E-24 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Gene3D G3DSA:1.10.10.10 544 627 7.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Pfam PF04545 Sigma-70, region 4 562 616 1.3E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Gene3D G3DSA:1.10.601.10 112 463 1.7E-92 T 14-10-2018 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 SUPERFAMILY SSF88946 114 461 3.45E-80 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Pfam PF04539 Sigma-70 region 3 473 549 2.1E-23 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 418 431 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 SUPERFAMILY SSF88659 467 540 6.54E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 6 625 35.591 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Pfam PF00140 Sigma-70 factor, region 1.2 97 125 4.4E-9 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Pfam PF04542 Sigma-70 region 2 394 463 7.6E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 588 614 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Gene3D G3DSA:1.10.10.10 467 542 1.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 390 616 5.9E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Pfam PF03979 Sigma-70 factor, region 1.1 8 84 1.9E-15 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 Gene3D G3DSA:1.10.220.120 6 67 5.6E-13 T 14-10-2018 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 PRINTS PR00046 Major sigma-70 factor signature 442 450 4.4E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 PRINTS PR00046 Major sigma-70 factor signature 418 431 4.4E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 PRINTS PR00046 Major sigma-70 factor signature 566 578 4.4E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 PRINTS PR00046 Major sigma-70 factor signature 603 614 4.4E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02445 7f6bf59ca5e42bb7db99bc040b8a9738 627 PRINTS PR00046 Major sigma-70 factor signature 588 603 4.4E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_02115 24b45697e5f1b1dbf93ac2584bc0c609 62 SUPERFAMILY SSF52540 1 60 7.43E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02115 24b45697e5f1b1dbf93ac2584bc0c609 62 Pfam PF00009 Elongation factor Tu GTP binding domain 1 57 6.7E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_02115 24b45697e5f1b1dbf93ac2584bc0c609 62 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 2 17 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site P029_02115 24b45697e5f1b1dbf93ac2584bc0c609 62 Gene3D G3DSA:3.40.50.300 1 62 1.5E-25 T 14-10-2018 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 Gene3D G3DSA:3.40.30.10 1 106 2.2E-31 T 14-10-2018 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 PIRSF PIRSF000077 1 105 2.6E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 SUPERFAMILY SSF52833 3 107 1.29E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 Pfam PF00085 Thioredoxin 4 102 5.2E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 PRINTS PR00421 Thioredoxin family signature 71 82 1.1E-8 T 14-10-2018 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 PRINTS PR00421 Thioredoxin family signature 31 40 1.1E-8 T 14-10-2018 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 PRINTS PR00421 Thioredoxin family signature 23 31 1.1E-8 T 14-10-2018 P029_00375 1b019f5ce16ff821b5aa6ece4bd41398 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 99 4.2E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 P029_02690 049d22f27d16bba9a7b48f845e85ac77 141 Pfam PF06723 MreB/Mbl protein 9 141 2.6E-42 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 P029_02690 049d22f27d16bba9a7b48f845e85ac77 141 SUPERFAMILY SSF53067 9 140 1.14E-25 T 14-10-2018 P029_02690 049d22f27d16bba9a7b48f845e85ac77 141 Gene3D G3DSA:3.90.640.10 26 101 2.8E-43 T 14-10-2018 P029_02690 049d22f27d16bba9a7b48f845e85ac77 141 Gene3D G3DSA:3.30.420.40 9 141 2.8E-43 T 14-10-2018 P029_04460 5656df5439bc1e634ef520c61fff3400 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 218 311 9.7E-16 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 P029_04460 5656df5439bc1e634ef520c61fff3400 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 127 2.1E-33 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 P029_04460 5656df5439bc1e634ef520c61fff3400 322 Gene3D G3DSA:3.40.50.2020 154 303 1.4E-90 T 14-10-2018 P029_04460 5656df5439bc1e634ef520c61fff3400 322 Gene3D G3DSA:3.40.50.2020 6 311 1.4E-90 T 14-10-2018 P029_04460 5656df5439bc1e634ef520c61fff3400 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 314 3.4E-77 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 P029_04460 5656df5439bc1e634ef520c61fff3400 322 SMART SM01400 1 127 1.3E-39 T 14-10-2018 P029_04460 5656df5439bc1e634ef520c61fff3400 322 SUPERFAMILY SSF53271 68 291 2.44E-39 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like P029_03220 10ac75d399400d56e5f24ec50eb2347c 178 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 62 2.9E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P029_03220 10ac75d399400d56e5f24ec50eb2347c 178 Pfam PF01467 Cytidylyltransferase-like 5 176 3.1E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P029_03220 10ac75d399400d56e5f24ec50eb2347c 178 Gene3D G3DSA:3.40.50.620 2 178 2.3E-33 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_03220 10ac75d399400d56e5f24ec50eb2347c 178 SUPERFAMILY SSF52374 3 177 7.19E-32 T 14-10-2018 P029_01365 868012adef2a7bddc74e67966d9916aa 345 SUPERFAMILY SSF53659 10 343 9.87E-93 T 14-10-2018 P029_01365 868012adef2a7bddc74e67966d9916aa 345 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 10 343 1.2E-93 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 P029_01365 868012adef2a7bddc74e67966d9916aa 345 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 345 121.966 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 P029_01365 868012adef2a7bddc74e67966d9916aa 345 Pfam PF02504 Fatty acid synthesis protein 10 330 4.0E-97 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 P029_01365 868012adef2a7bddc74e67966d9916aa 345 Gene3D G3DSA:3.40.718.10 7 345 8.7E-114 T 14-10-2018 P029_01365 868012adef2a7bddc74e67966d9916aa 345 PIRSF PIRSF002465 7 345 3.5E-110 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 P029_02915 064cfb6e2f3dc96afdee176cb6e17c89 211 SUPERFAMILY SSF55620 21 208 9.64E-58 T 14-10-2018 P029_02915 064cfb6e2f3dc96afdee176cb6e17c89 211 Gene3D G3DSA:3.30.1130.10 76 210 1.1E-41 T 14-10-2018 P029_02915 064cfb6e2f3dc96afdee176cb6e17c89 211 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 131 141 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_02915 064cfb6e2f3dc96afdee176cb6e17c89 211 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 22 208 28.887 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_02915 064cfb6e2f3dc96afdee176cb6e17c89 211 Pfam PF01227 GTP cyclohydrolase I 27 206 1.8E-54 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 P029_02915 064cfb6e2f3dc96afdee176cb6e17c89 211 Gene3D G3DSA:1.10.286.10 21 68 1.5E-15 T 14-10-2018 P029_03940 8869ddf910b84475c2d9fbd600b7956b 342 SUPERFAMILY SSF52540 4 246 9.35E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03940 8869ddf910b84475c2d9fbd600b7956b 342 Pfam PF00005 ABC transporter 25 166 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_03940 8869ddf910b84475c2d9fbd600b7956b 342 Gene3D G3DSA:3.40.50.300 3 253 2.0E-67 T 14-10-2018 P029_03940 8869ddf910b84475c2d9fbd600b7956b 342 SUPERFAMILY SSF50331 242 340 3.74E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal P029_03940 8869ddf910b84475c2d9fbd600b7956b 342 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_03940 8869ddf910b84475c2d9fbd600b7956b 342 SMART SM00382 29 215 1.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01285 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Gene3D G3DSA:3.100.10.10 66 144 7.1E-14 T 14-10-2018 P029_01285 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 16.257 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 P029_01285 cd835e5ea89a5ddb2ade1b83ec85c17d 145 SUPERFAMILY SSF52080 4 144 1.13E-31 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily P029_01285 cd835e5ea89a5ddb2ade1b83ec85c17d 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 143 3.5E-28 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P P029_01285 cd835e5ea89a5ddb2ade1b83ec85c17d 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 114 144 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01285 cd835e5ea89a5ddb2ade1b83ec85c17d 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 141 1.2E-37 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01720 b76a5e6dd5bbe5836ac02a6cad65d51d 81 Pfam PF01176 Translation initiation factor 1A / IF-1 10 76 7.0E-16 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 P029_01720 b76a5e6dd5bbe5836ac02a6cad65d51d 81 Gene3D G3DSA:2.40.50.140 3 78 2.1E-22 T 14-10-2018 P029_01720 b76a5e6dd5bbe5836ac02a6cad65d51d 81 SUPERFAMILY SSF50249 3 80 3.0E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01720 b76a5e6dd5bbe5836ac02a6cad65d51d 81 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 76 4.0E-19 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 P029_01945 287ff60af755fe2af07e3209055de1ba 118 SUPERFAMILY SSF89919 10 115 1.96E-23 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily P029_01945 287ff60af755fe2af07e3209055de1ba 118 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 114 3.0E-16 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P029_01945 287ff60af755fe2af07e3209055de1ba 118 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 P029_01945 287ff60af755fe2af07e3209055de1ba 118 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 113 22.329 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P029_01945 287ff60af755fe2af07e3209055de1ba 118 Pfam PF02033 Ribosome-binding factor A 11 112 1.6E-19 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P029_01945 287ff60af755fe2af07e3209055de1ba 118 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 15 100 6.0E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 P029_01945 287ff60af755fe2af07e3209055de1ba 118 Gene3D G3DSA:3.30.300.20 8 118 7.9E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta P029_04925 bd2903337179eccb18ae42b7ef8ea7f8 185 Gene3D G3DSA:3.30.910.20 23 185 2.1E-24 T 14-10-2018 IPR024930 Skp domain superfamily P029_04925 bd2903337179eccb18ae42b7ef8ea7f8 185 Pfam PF03938 Outer membrane protein (OmpH-like) 16 174 2.8E-20 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 P029_04925 bd2903337179eccb18ae42b7ef8ea7f8 185 SUPERFAMILY SSF111384 34 175 3.92E-19 T 14-10-2018 P029_04925 bd2903337179eccb18ae42b7ef8ea7f8 185 SMART SM00935 15 175 5.5E-31 T 14-10-2018 IPR005632 Chaperone protein Skp GO:0051082 P029_03920 8badb73411ffe5d52a119b59d4d09184 286 Gene3D G3DSA:3.40.50.1980 181 286 2.7E-22 T 14-10-2018 P029_03920 8badb73411ffe5d52a119b59d4d09184 286 Gene3D G3DSA:3.40.50.1980 19 180 1.4E-33 T 14-10-2018 P029_03920 8badb73411ffe5d52a119b59d4d09184 286 SUPERFAMILY SSF53807 16 285 4.17E-55 T 14-10-2018 P029_03920 8badb73411ffe5d52a119b59d4d09184 286 Pfam PF01297 Zinc-uptake complex component A periplasmic 26 284 1.1E-45 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 P029_04975 9a9ca14d61b6f00575110fc0e4b23a26 183 SUPERFAMILY SSF47413 21 103 1.39E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P029_04975 9a9ca14d61b6f00575110fc0e4b23a26 183 Pfam PF01381 Helix-turn-helix 34 88 4.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P029_04975 9a9ca14d61b6f00575110fc0e4b23a26 183 SMART SM00530 33 88 5.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P029_04975 9a9ca14d61b6f00575110fc0e4b23a26 183 Gene3D G3DSA:1.10.260.40 22 96 1.7E-18 T 14-10-2018 P029_00985 92ccec26720096e54d2685ae8e7dbe07 211 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 189 6.9E-63 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 P029_00985 92ccec26720096e54d2685ae8e7dbe07 211 Gene3D G3DSA:3.40.50.170 1 211 8.1E-90 T 14-10-2018 P029_00985 92ccec26720096e54d2685ae8e7dbe07 211 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 6 186 30.066 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 P029_00985 92ccec26720096e54d2685ae8e7dbe07 211 SUPERFAMILY SSF53328 5 196 1.31E-57 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P029_00985 92ccec26720096e54d2685ae8e7dbe07 211 Pfam PF00551 Formyl transferase 6 178 1.0E-52 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P029_04645 026e3977af52cb6fc26367144880f3a5 490 SMART SM00228 285 367 2.0E-17 T 14-10-2018 IPR001478 PDZ domain GO:0005515 P029_04645 026e3977af52cb6fc26367144880f3a5 490 SMART SM00228 398 478 9.4E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 P029_04645 026e3977af52cb6fc26367144880f3a5 490 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 394 474 2.1E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 P029_04645 026e3977af52cb6fc26367144880f3a5 490 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 42 480 1.8E-135 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50156 393 483 1.97E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 P029_04645 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 238 255 5.4E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 141 161 5.4E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 5.4E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 120 132 5.4E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 325 337 5.4E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 PRINTS PR00834 HtrA/DegQ protease family signature 216 233 5.4E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 P029_04645 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50156 256 379 3.15E-25 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 P029_04645 026e3977af52cb6fc26367144880f3a5 490 Pfam PF13180 PDZ domain 286 375 1.7E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 P029_04645 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.30.42.10 280 384 4.1E-28 T 14-10-2018 P029_04645 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.40.10.120 40 278 7.5E-75 T 14-10-2018 P029_04645 026e3977af52cb6fc26367144880f3a5 490 Gene3D G3DSA:2.30.42.10 401 489 6.0E-16 T 14-10-2018 P029_04645 026e3977af52cb6fc26367144880f3a5 490 Pfam PF13365 Trypsin-like peptidase domain 111 245 4.6E-35 T 14-10-2018 P029_04645 026e3977af52cb6fc26367144880f3a5 490 SUPERFAMILY SSF50494 42 281 9.9E-60 T 14-10-2018 IPR009003 Peptidase S1, PA clan P029_01055 739aa7484aab083f633526f365b7a8bb 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 87.796 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_01055 739aa7484aab083f633526f365b7a8bb 462 Pfam PF00206 Lyase 12 341 3.2E-109 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal P029_01055 739aa7484aab083f633526f365b7a8bb 462 Gene3D G3DSA:1.20.200.10 138 405 6.6E-117 T 14-10-2018 P029_01055 739aa7484aab083f633526f365b7a8bb 462 Pfam PF10415 Fumarase C C-terminus 407 459 1.8E-21 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_01055 739aa7484aab083f633526f365b7a8bb 462 Gene3D G3DSA:1.10.275.10 4 137 1.5E-56 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal P029_01055 739aa7484aab083f633526f365b7a8bb 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 3.5E-223 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_01055 739aa7484aab083f633526f365b7a8bb 462 Gene3D G3DSA:1.10.40.30 406 462 9.7E-24 T 14-10-2018 P029_01055 739aa7484aab083f633526f365b7a8bb 462 SUPERFAMILY SSF48557 3 459 1.77E-153 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 P029_01055 739aa7484aab083f633526f365b7a8bb 462 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 2.6E-33 T 14-10-2018 IPR000362 Fumarate lyase family P029_01055 739aa7484aab083f633526f365b7a8bb 462 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 2.6E-33 T 14-10-2018 IPR000362 Fumarate lyase family P029_01055 739aa7484aab083f633526f365b7a8bb 462 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 2.6E-33 T 14-10-2018 IPR000362 Fumarate lyase family P029_01055 739aa7484aab083f633526f365b7a8bb 462 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.6E-33 T 14-10-2018 IPR000362 Fumarate lyase family P029_01055 739aa7484aab083f633526f365b7a8bb 462 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 279 2.4E-61 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 Gene3D G3DSA:3.30.300.20 187 295 3.1E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 169 1.1E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 SUPERFAMILY SSF52540 11 215 2.27E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 Pfam PF07650 KH domain 209 285 8.9E-15 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 SUPERFAMILY SSF54814 182 287 3.47E-31 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 Hamap MF_00367 GTPase Era [era]. 7 294 28.032 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 Pfam PF01926 50S ribosome-binding GTPase 12 126 6.4E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_01520 77e51a05fc1ed8bbcb9063c56a9440ff 295 Gene3D G3DSA:3.40.50.300 7 186 1.1E-41 T 14-10-2018 P029_00825 6280e5c66282c5460a18c08637d958bd 306 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 114 3.2E-27 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P029_00825 6280e5c66282c5460a18c08637d958bd 306 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 118 289 3.5E-55 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P029_00825 6280e5c66282c5460a18c08637d958bd 306 SUPERFAMILY SSF56059 118 303 5.48E-47 T 14-10-2018 P029_00825 6280e5c66282c5460a18c08637d958bd 306 Gene3D G3DSA:3.30.1490.20 131 194 7.6E-85 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P029_00825 6280e5c66282c5460a18c08637d958bd 306 Gene3D G3DSA:3.40.50.20 13 108 7.6E-85 T 14-10-2018 P029_00825 6280e5c66282c5460a18c08637d958bd 306 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 303 2.3E-109 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P029_00825 6280e5c66282c5460a18c08637d958bd 306 Gene3D G3DSA:3.30.470.20 109 287 7.6E-85 T 14-10-2018 P029_00825 6280e5c66282c5460a18c08637d958bd 306 SUPERFAMILY SSF52440 3 116 2.56E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P029_00825 6280e5c66282c5460a18c08637d958bd 306 Hamap MF_00162 Glutathione synthetase [gshB]. 1 306 104.542 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 P029_01345 977b23bbbd9163880aa779029f9c6fc6 164 SMART SM00903 16 159 4.4E-52 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 P029_01345 977b23bbbd9163880aa779029f9c6fc6 164 Gene3D G3DSA:2.30.110.10 1 163 1.9E-46 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 P029_01345 977b23bbbd9163880aa779029f9c6fc6 164 SUPERFAMILY SSF50475 6 161 5.89E-45 T 14-10-2018 P029_01345 977b23bbbd9163880aa779029f9c6fc6 164 Pfam PF01613 Flavin reductase like domain 16 158 2.4E-35 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 P029_05590 9d2b602aa63e2534657f7a6b0277124f 286 Gene3D G3DSA:2.40.160.20 79 252 8.9E-7 T 14-10-2018 P029_05590 9d2b602aa63e2534657f7a6b0277124f 286 Pfam PF01617 Surface antigen 42 286 7.2E-40 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05590 9d2b602aa63e2534657f7a6b0277124f 286 SUPERFAMILY SSF56925 104 286 7.85E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 122 5.7E-62 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.7E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 111 123 1.7E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 95 111 1.7E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.7E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 59 78 1.7E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PRINTS PR01034 Ribosomal protein S12 signature 78 95 1.7E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 124 37.765 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 PIRSF PIRSF002133 1 124 2.3E-52 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 Pfam PF00164 Ribosomal protein S12/S23 13 122 6.6E-39 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 SUPERFAMILY SSF50249 2 122 1.71E-48 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_04175 1a9a8e5e3fc91432e5a1569a566732af 124 Gene3D G3DSA:2.40.50.140 1 124 3.6E-59 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 523 867 7.2E-80 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 SUPERFAMILY SSF51621 514 869 6.91E-108 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Gene3D G3DSA:1.20.80.30 114 199 9.4E-86 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Gene3D G3DSA:3.30.470.20 247 344 1.1E-41 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 451 462 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 SUPERFAMILY SSF56059 5 382 3.18E-124 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 PIRSF PIRSF000853 2 874 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Pfam PF00391 PEP-utilising enzyme, mobile domain 423 505 5.2E-25 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 759 777 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Gene3D G3DSA:3.20.20.60 534 872 1.1E-128 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Gene3D G3DSA:3.30.1490.20 18 246 9.4E-86 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Gene3D G3DSA:1.10.189.10 348 531 1.5E-66 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 4 869 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 SUPERFAMILY SSF52009 392 514 3.53E-33 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Gene3D G3DSA:3.50.30.10 386 511 1.5E-66 T 14-10-2018 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 58 299 4.2E-33 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 P029_00790 9a0e3f1873d52f2aa5fb9ce318b3e181 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 307 359 9.0E-10 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 P029_04085 97fba712373f2eefd3e346b959bbf3a7 430 Pfam PF01617 Surface antigen 60 430 4.3E-55 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04085 97fba712373f2eefd3e346b959bbf3a7 430 SUPERFAMILY SSF56925 106 430 6.59E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04085 97fba712373f2eefd3e346b959bbf3a7 430 Gene3D G3DSA:2.40.160.20 256 392 5.2E-7 T 14-10-2018 P029_04265 a1ae40ed0a1a48ee05923c6d0dd78a9d 263 Pfam PF12706 Beta-lactamase superfamily domain 45 230 1.5E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase P029_04265 a1ae40ed0a1a48ee05923c6d0dd78a9d 263 Gene3D G3DSA:3.60.15.10 1 263 2.3E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P029_04265 a1ae40ed0a1a48ee05923c6d0dd78a9d 263 SUPERFAMILY SSF56281 1 263 2.23E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P029_04265 a1ae40ed0a1a48ee05923c6d0dd78a9d 263 SMART SM00849 34 209 1.2E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase P029_05120 97feb3a18725f32143faecfc981771f2 702 Gene3D G3DSA:3.40.50.300 227 460 2.2E-73 T 14-10-2018 P029_05120 97feb3a18725f32143faecfc981771f2 702 SUPERFAMILY SSF50249 30 199 4.97E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_05120 97feb3a18725f32143faecfc981771f2 702 Pfam PF00270 DEAD/DEAH box helicase 288 447 1.1E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 P029_05120 97feb3a18725f32143faecfc981771f2 702 SMART SM00487 282 470 7.7E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P029_05120 97feb3a18725f32143faecfc981771f2 702 Pfam PF00271 Helicase conserved C-terminal domain 483 598 1.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal P029_05120 97feb3a18725f32143faecfc981771f2 702 SMART SM00490 515 599 1.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal P029_05120 97feb3a18725f32143faecfc981771f2 702 Gene3D G3DSA:2.40.50.140 71 168 4.4E-10 T 14-10-2018 P029_05120 97feb3a18725f32143faecfc981771f2 702 SUPERFAMILY SSF52540 204 460 1.28E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05120 97feb3a18725f32143faecfc981771f2 702 Gene3D G3DSA:3.40.50.300 468 639 2.8E-46 T 14-10-2018 P029_05120 97feb3a18725f32143faecfc981771f2 702 Pfam PF17191 RecG wedge domain 34 198 1.1E-9 T 14-10-2018 IPR033454 RecG, wedge domain P029_05120 97feb3a18725f32143faecfc981771f2 702 SUPERFAMILY SSF52540 310 659 4.11E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04005 3125ee397a1666c7a0060d95ce5f4985 109 SUPERFAMILY SSF81343 3 102 8.28E-18 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04005 3125ee397a1666c7a0060d95ce5f4985 109 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 5 94 4.4E-10 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04005 3125ee397a1666c7a0060d95ce5f4985 109 Gene3D G3DSA:1.20.1300.10 1 105 6.3E-17 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04005 3125ee397a1666c7a0060d95ce5f4985 109 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 3 102 6.4E-23 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 P029_01645 f9168faedbee92699813d840ef7ec227 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 146 33.314 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 P029_01645 f9168faedbee92699813d840ef7ec227 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 145 1.8E-54 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 P029_01645 f9168faedbee92699813d840ef7ec227 146 Gene3D G3DSA:2.70.40.10 2 145 2.3E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily P029_01645 f9168faedbee92699813d840ef7ec227 146 SUPERFAMILY SSF51283 4 146 6.8E-51 T 14-10-2018 IPR036157 dUTPase-like superfamily P029_01645 f9168faedbee92699813d840ef7ec227 146 Pfam PF00692 dUTPase 15 145 4.4E-32 T 14-10-2018 IPR029054 dUTPase-like P029_01490 1d634df66297c8fff913222843c8a616 633 Pfam PF10150 Ribonuclease E/G family 196 466 5.3E-85 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 P029_01490 1d634df66297c8fff913222843c8a616 633 Gene3D G3DSA:3.40.1260.20 475 583 3.4E-16 T 14-10-2018 P029_01490 1d634df66297c8fff913222843c8a616 633 SUPERFAMILY SSF50249 46 199 4.94E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01490 1d634df66297c8fff913222843c8a616 633 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 19 499 4.3E-137 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 P029_04455 b60d4ad2ef3056906601c97cccb008eb 342 Hamap MF_02040 Iron-sulfur cluster carrier protein. 91 337 31.947 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein P029_04455 b60d4ad2ef3056906601c97cccb008eb 342 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 336 4.1E-83 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 P029_04455 b60d4ad2ef3056906601c97cccb008eb 342 SUPERFAMILY SSF52540 87 308 2.52E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04455 b60d4ad2ef3056906601c97cccb008eb 342 Gene3D G3DSA:3.40.50.300 82 324 1.5E-66 T 14-10-2018 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Gene3D G3DSA:3.40.50.300 549 765 2.5E-81 T 14-10-2018 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 SMART SM01086 766 855 3.9E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_01010 094c8fc26ca7177525a174f998f5b89d 859 SUPERFAMILY SSF52540 547 851 7.22E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 207 339 1.4E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Gene3D G3DSA:1.10.8.60 766 859 9.8E-23 T 14-10-2018 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 SUPERFAMILY SSF81923 4 158 7.26E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 98 147 3.0E-7 T 14-10-2018 IPR004176 Clp, N-terminal P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 2.0E-6 T 14-10-2018 IPR004176 Clp, N-terminal P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 3.1E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 SUPERFAMILY SSF52540 162 524 4.91E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.8E-20 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_01010 094c8fc26ca7177525a174f998f5b89d 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Gene3D G3DSA:3.40.50.300 150 345 1.3E-68 T 14-10-2018 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Gene3D G3DSA:1.10.1780.10 2 149 7.1E-28 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.5E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.5E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.5E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.5E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 Gene3D G3DSA:3.40.50.300 346 544 4.4E-68 T 14-10-2018 P029_01010 094c8fc26ca7177525a174f998f5b89d 859 SMART SM00382 597 748 6.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01010 094c8fc26ca7177525a174f998f5b89d 859 SMART SM00382 201 347 7.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 Gene3D G3DSA:3.30.540.10 4 142 2.0E-23 T 14-10-2018 P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 Pfam PF00459 Inositol monophosphatase family 43 211 1.6E-13 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 5.5E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 5.5E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 5.5E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 SUPERFAMILY SSF56655 6 249 4.32E-32 T 14-10-2018 P029_02345 0315a028e86386607c6f2ef28fc2ada5 256 Gene3D G3DSA:3.40.190.80 149 252 2.9E-5 T 14-10-2018 P029_03095 594df2b8496929b1274936e7be087b25 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 328 341 2.7E-8 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P029_03095 594df2b8496929b1274936e7be087b25 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 300 314 2.7E-8 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P029_03095 594df2b8496929b1274936e7be087b25 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 221 236 2.7E-8 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P029_03095 594df2b8496929b1274936e7be087b25 517 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 352 364 2.7E-8 T 14-10-2018 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006270 P029_03095 594df2b8496929b1274936e7be087b25 517 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 414 508 7.2E-22 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain P029_03095 594df2b8496929b1274936e7be087b25 517 SUPERFAMILY SSF54211 8 167 1.67E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_03095 594df2b8496929b1274936e7be087b25 517 SMART SM00382 222 403 4.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_03095 594df2b8496929b1274936e7be087b25 517 Gene3D G3DSA:3.30.230.10 5 169 3.0E-10 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_03095 594df2b8496929b1274936e7be087b25 517 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 300 315 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 P029_03095 594df2b8496929b1274936e7be087b25 517 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 142 3.4E-38 T 14-10-2018 P029_03095 594df2b8496929b1274936e7be087b25 517 Gene3D G3DSA:3.40.50.300 193 515 3.8E-59 T 14-10-2018 P029_03095 594df2b8496929b1274936e7be087b25 517 SUPERFAMILY SSF52540 202 514 1.65E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03095 594df2b8496929b1274936e7be087b25 517 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 508 1.7E-156 T 14-10-2018 IPR004482 Mg chelatase-related protein P029_03095 594df2b8496929b1274936e7be087b25 517 Pfam PF01078 Magnesium chelatase, subunit ChlI 202 402 3.5E-88 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Pfam PF00009 Elongation factor Tu GTP binding domain 6 178 3.4E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Pfam PF03144 Elongation factor Tu domain 2 224 292 8.0E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 SUPERFAMILY SSF50465 302 393 2.88E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 5 393 9.4E-202 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 PRINTS PR00315 GTP-binding elongation factor signature 129 138 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 PRINTS PR00315 GTP-binding elongation factor signature 76 86 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 PRINTS PR00315 GTP-binding elongation factor signature 92 103 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 PRINTS PR00315 GTP-binding elongation factor signature 10 23 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 PRINTS PR00315 GTP-binding elongation factor signature 56 64 8.1E-23 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 393 56.45 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Pfam PF03143 Elongation factor Tu C-terminal domain 298 391 1.7E-30 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Gene3D G3DSA:2.40.30.10 205 333 4.0E-50 T 14-10-2018 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 SUPERFAMILY SSF52540 5 225 3.13E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Gene3D G3DSA:3.40.50.300 2 202 1.8E-63 T 14-10-2018 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 Gene3D G3DSA:2.40.30.10 337 392 1.4E-26 T 14-10-2018 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 143 8.4E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_04160 18bcd0264c4ee568c9f44c6a41340e02 393 SUPERFAMILY SSF50447 204 298 1.75E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_00700 f9f902adcc2f169052c6f977a8431dd6 287 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 31 237 2.2E-62 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 P029_00700 f9f902adcc2f169052c6f977a8431dd6 287 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 27 245 28.118 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 P029_00700 f9f902adcc2f169052c6f977a8431dd6 287 Pfam PF02511 Thymidylate synthase complementing protein 33 231 1.4E-55 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 P029_00700 f9f902adcc2f169052c6f977a8431dd6 287 SUPERFAMILY SSF69796 22 244 3.4E-67 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 P029_00700 f9f902adcc2f169052c6f977a8431dd6 287 Gene3D G3DSA:3.30.1360.170 16 252 4.5E-72 T 14-10-2018 P029_00080 9d74e037784017cd5b75486bfb077b0d 192 SMART SM01207 7 184 5.4E-77 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P029_00080 9d74e037784017cd5b75486bfb077b0d 192 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 183 9.8E-50 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P029_00080 9d74e037784017cd5b75486bfb077b0d 192 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 4 192 19.476 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P029_00080 9d74e037784017cd5b75486bfb077b0d 192 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 191 3.1E-53 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 Gene3D G3DSA:3.40.50.880 166 365 5.8E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_01655 38cd63cba75f5dc18949d335ba588c17 365 SUPERFAMILY SSF52317 170 361 5.33E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_01655 38cd63cba75f5dc18949d335ba588c17 365 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 134 9.6E-43 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 Gene3D G3DSA:3.50.30.20 5 151 7.1E-47 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 361 2.4E-120 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 335 348 2.5E-12 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 250 261 2.5E-12 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00096 Glutamine amidotransferase superfamily signature 221 230 2.5E-12 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 250 266 8.6E-32 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 292 303 8.6E-32 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 218 232 8.6E-32 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 178 192 8.6E-32 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 267 284 8.6E-32 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00097 Anthranilate synthase component II signature 335 348 4.7E-8 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00097 Anthranilate synthase component II signature 221 230 4.7E-8 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 PRINTS PR00097 Anthranilate synthase component II signature 250 261 4.7E-8 T 14-10-2018 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 Pfam PF00117 Glutamine amidotransferase class-I 180 357 8.6E-42 T 14-10-2018 IPR017926 Glutamine amidotransferase P029_01655 38cd63cba75f5dc18949d335ba588c17 365 SMART SM01097 6 135 7.7E-68 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 364 40.978 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_01655 38cd63cba75f5dc18949d335ba588c17 365 SUPERFAMILY SSF52021 6 146 2.35E-48 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 P029_00860 866ed7cae257e522233c7e4647cacf35 344 Gene3D G3DSA:3.90.650.10 169 344 7.6E-67 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00860 866ed7cae257e522233c7e4647cacf35 344 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 2 344 42.052 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_00860 866ed7cae257e522233c7e4647cacf35 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 162 6.5E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain P029_00860 866ed7cae257e522233c7e4647cacf35 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 175 340 1.5E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain P029_00860 866ed7cae257e522233c7e4647cacf35 344 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 334 1.2E-122 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 P029_00860 866ed7cae257e522233c7e4647cacf35 344 SUPERFAMILY SSF56042 174 342 8.22E-55 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_00860 866ed7cae257e522233c7e4647cacf35 344 SUPERFAMILY SSF55326 4 167 8.97E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_00860 866ed7cae257e522233c7e4647cacf35 344 Gene3D G3DSA:3.30.1330.10 1 168 1.8E-62 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_05340 dbf16e14cae2b489597286e07165f396 113 SUPERFAMILY SSF56925 1 113 3.14E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05340 dbf16e14cae2b489597286e07165f396 113 Pfam PF01617 Surface antigen 1 113 7.8E-45 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05340 dbf16e14cae2b489597286e07165f396 113 Gene3D G3DSA:2.40.160.20 1 78 1.2E-7 T 14-10-2018 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 4.1E-17 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 4.1E-17 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 PRINTS PR00986 Valyl-tRNA synthetase signature 464 485 4.1E-17 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 PRINTS PR00986 Valyl-tRNA synthetase signature 357 370 4.1E-17 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 4.1E-17 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 Gene3D G3DSA:3.90.740.10 177 353 1.2E-215 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 SUPERFAMILY SSF47323 594 800 7.48E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 TIGRFAM TIGR00422 valS: valine--tRNA ligase 11 799 1.3E-206 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 SUPERFAMILY SSF50677 194 352 3.14E-39 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 579 4.6E-113 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 Pfam PF08264 Anticodon-binding domain of tRNA 621 761 2.4E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 Gene3D G3DSA:3.40.50.620 28 543 1.2E-215 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 SUPERFAMILY SSF52374 4 587 4.33E-113 T 14-10-2018 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 Hamap MF_02005 Valine--tRNA ligase [valS]. 8 794 26.191 T 14-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 P029_05005 5483ef8588abade1fcec7ac04a75ceb5 806 Gene3D G3DSA:1.10.730.10 11 750 1.2E-215 T 14-10-2018 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 SUPERFAMILY SSF55120 1 246 5.61E-77 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 241 4.6E-60 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 Gene3D G3DSA:3.30.70.660 108 245 2.6E-45 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 246 33.377 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 PIRSF PIRSF001430 1 246 3.1E-71 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 Gene3D G3DSA:3.30.70.580 1 107 2.4E-32 T 14-10-2018 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 Pfam PF01416 tRNA pseudouridine synthase 145 246 2.8E-27 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02170 0910825549223cda3a883e41e9b5ac6b 246 Pfam PF01416 tRNA pseudouridine synthase 5 105 2.5E-10 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 PIRSF PIRSF037677 2 816 4.2E-168 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 SUPERFAMILY SSF52540 570 798 1.33E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 SUPERFAMILY SSF53150 115 270 3.4E-37 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 8 804 4.1E-247 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 SMART SM00533 287 594 2.4E-83 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 SUPERFAMILY SSF48334 271 569 1.15E-76 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 SMART SM00534 608 795 3.0E-102 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Gene3D G3DSA:3.30.420.110 128 264 2.0E-28 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 SUPERFAMILY SSF55271 3 116 4.71E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Gene3D G3DSA:3.40.1170.10 1 122 5.0E-45 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Pfam PF00488 MutS domain V 612 796 2.4E-76 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 820 21.801 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Gene3D G3DSA:1.10.1420.10 270 562 1.7E-78 T 14-10-2018 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Pfam PF05190 MutS family domain IV 432 522 6.1E-19 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Pfam PF01624 MutS domain I 8 120 5.9E-39 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Pfam PF05192 MutS domain III 274 562 3.4E-36 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Pfam PF05188 MutS domain II 129 256 5.1E-22 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Gene3D G3DSA:1.10.1420.10 391 506 1.7E-78 T 14-10-2018 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 Gene3D G3DSA:3.40.50.300 571 817 7.2E-90 T 14-10-2018 P029_03475 3fe3b023f5981acc8cd79c46067a3559 820 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 689 705 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P029_05620 69745ec86525215fc88a4cd45162d168 653 Gene3D G3DSA:3.40.50.300 267 412 1.4E-47 T 14-10-2018 P029_05620 69745ec86525215fc88a4cd45162d168 653 Pfam PF02151 UvrB/uvrC motif 619 649 6.2E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 P029_05620 69745ec86525215fc88a4cd45162d168 653 SMART SM00490 458 544 1.4E-20 T 14-10-2018 IPR001650 Helicase, C-terminal P029_05620 69745ec86525215fc88a4cd45162d168 653 Gene3D G3DSA:3.40.50.300 413 594 1.6E-50 T 14-10-2018 P029_05620 69745ec86525215fc88a4cd45162d168 653 Pfam PF00271 Helicase conserved C-terminal domain 442 543 1.4E-17 T 14-10-2018 IPR001650 Helicase, C-terminal P029_05620 69745ec86525215fc88a4cd45162d168 653 Hamap MF_00204 UvrABC system protein B [uvrB]. 2 651 40.278 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 P029_05620 69745ec86525215fc88a4cd45162d168 653 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 648 2.8E-292 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 P029_05620 69745ec86525215fc88a4cd45162d168 653 SMART SM00487 8 423 3.0E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain P029_05620 69745ec86525215fc88a4cd45162d168 653 SUPERFAMILY SSF46600 616 650 8.63E-8 T 14-10-2018 IPR036876 UVR domain superfamily P029_05620 69745ec86525215fc88a4cd45162d168 653 Pfam PF12344 Ultra-violet resistance protein B 550 591 6.2E-23 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain P029_05620 69745ec86525215fc88a4cd45162d168 653 SUPERFAMILY SSF52540 3 413 2.79E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05620 69745ec86525215fc88a4cd45162d168 653 Pfam PF04851 Type III restriction enzyme, res subunit 15 110 2.8E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 P029_05620 69745ec86525215fc88a4cd45162d168 653 SUPERFAMILY SSF52540 34 566 1.02E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05620 69745ec86525215fc88a4cd45162d168 653 Gene3D G3DSA:3.40.50.300 1 228 1.0E-74 T 14-10-2018 P029_05620 69745ec86525215fc88a4cd45162d168 653 Gene3D G3DSA:4.10.860.10 604 652 2.9E-8 T 14-10-2018 P029_04790 5b9f271201c884983443d0246b391895 873 Gene3D G3DSA:3.90.1440.10 230 357 3.4E-171 T 14-10-2018 P029_04790 5b9f271201c884983443d0246b391895 873 SUPERFAMILY SSF52540 20 404 2.93E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04790 5b9f271201c884983443d0246b391895 873 SUPERFAMILY SSF52540 405 613 9.14E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 102 116 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 328 350 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 64 88 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 402 415 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 118 128 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 171 191 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 PRINTS PR00906 SecA protein signature 365 382 7.3E-66 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 827 19.306 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 SMART SM00957 5 391 3.7E-279 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 P029_04790 5b9f271201c884983443d0246b391895 873 Gene3D G3DSA:1.10.3060.10 616 828 6.4E-47 T 14-10-2018 P029_04790 5b9f271201c884983443d0246b391895 873 Pfam PF02810 SEC-C motif 852 869 2.2E-9 T 14-10-2018 IPR004027 SEC-C motif P029_04790 5b9f271201c884983443d0246b391895 873 SUPERFAMILY SSF81886 615 860 7.06E-58 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily P029_04790 5b9f271201c884983443d0246b391895 873 Pfam PF07516 SecA Wing and Scaffold domain 612 824 1.2E-50 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 P029_04790 5b9f271201c884983443d0246b391895 873 Pfam PF07517 SecA DEAD-like domain 17 390 5.2E-126 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 P029_04790 5b9f271201c884983443d0246b391895 873 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 811 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 P029_04790 5b9f271201c884983443d0246b391895 873 SMART SM00958 229 347 7.6E-70 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 P029_04790 5b9f271201c884983443d0246b391895 873 Gene3D G3DSA:3.40.50.300 22 404 3.4E-171 T 14-10-2018 P029_04790 5b9f271201c884983443d0246b391895 873 ProSitePatterns PS01312 SecA family signature. 489 504 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 P029_04790 5b9f271201c884983443d0246b391895 873 Gene3D G3DSA:3.40.50.300 406 614 1.6E-85 T 14-10-2018 P029_04790 5b9f271201c884983443d0246b391895 873 SUPERFAMILY SSF81767 228 357 1.44E-41 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 P029_04790 5b9f271201c884983443d0246b391895 873 Pfam PF01043 SecA preprotein cross-linking domain 234 347 5.4E-36 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 SMART SM00937 64 179 1.1E-55 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 Pfam PF03462 PCRF domain 12 204 4.1E-64 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 Pfam PF00472 RF-1 domain 212 321 2.2E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 SUPERFAMILY SSF75620 11 354 1.01E-125 T 14-10-2018 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 Gene3D G3DSA:3.30.70.1660 113 343 1.0E-94 T 14-10-2018 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 Gene3D G3DSA:3.30.160.20 211 297 1.0E-94 T 14-10-2018 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 3 358 38.075 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 P029_01820 8ae2d02fd30d0d3bfd5884f92cba48fc 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 5 357 2.7E-149 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 P029_04465 f49e07d460168c1edfda26853482d8dc 110 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 17 110 5.8E-19 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 P029_04465 f49e07d460168c1edfda26853482d8dc 110 Gene3D G3DSA:1.10.20.60 13 108 4.1E-20 T 14-10-2018 P029_04465 f49e07d460168c1edfda26853482d8dc 110 SUPERFAMILY SSF141000 16 108 1.44E-22 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 P029_04465 f49e07d460168c1edfda26853482d8dc 110 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 16 110 19.914 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 P029_04465 f49e07d460168c1edfda26853482d8dc 110 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 34 105 4.1E-17 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 P029_01190 967673b771cbe79c17dac2c1caa24f13 105 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.2E-36 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01190 967673b771cbe79c17dac2c1caa24f13 105 SUPERFAMILY SSF54999 5 102 1.96E-31 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily P029_01190 967673b771cbe79c17dac2c1caa24f13 105 Pfam PF00338 Ribosomal protein S10p/S20e 8 101 3.5E-29 T 14-10-2018 IPR027486 Ribosomal protein S10 domain P029_01190 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.1E-10 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01190 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.1E-10 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01190 967673b771cbe79c17dac2c1caa24f13 105 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.1E-10 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01190 967673b771cbe79c17dac2c1caa24f13 105 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 23.218 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01190 967673b771cbe79c17dac2c1caa24f13 105 Gene3D G3DSA:3.30.70.600 1 103 1.2E-31 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily P029_01190 967673b771cbe79c17dac2c1caa24f13 105 SMART SM01403 7 101 1.7E-42 T 14-10-2018 IPR027486 Ribosomal protein S10 domain P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 Pfam PF02355 Protein export membrane protein 96 264 6.3E-55 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 96 260 2.5E-49 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 Gene3D G3DSA:1.20.1640.10 98 273 1.3E-11 T 14-10-2018 P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 2 274 24.772 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 Pfam PF07549 SecD/SecF GG Motif 12 35 4.7E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 17 263 1.3E-66 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 PRINTS PR01755 Bacterial translocase SecF protein signature 179 197 2.4E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 PRINTS PR01755 Bacterial translocase SecF protein signature 131 145 2.4E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 PRINTS PR01755 Bacterial translocase SecF protein signature 211 226 2.4E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 PRINTS PR01755 Bacterial translocase SecF protein signature 16 31 2.4E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial P029_05450 ae9b204b1deb696b5756bc079cdc6d6b 278 SUPERFAMILY SSF82866 120 263 2.09E-35 T 14-10-2018 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 6.3E-35 T 14-10-2018 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.3E-35 T 14-10-2018 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 6.3E-35 T 14-10-2018 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.3E-35 T 14-10-2018 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 6.3E-35 T 14-10-2018 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 SUPERFAMILY SSF51905 9 317 1.0E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_02735 a5e3768bd53914576beaefe417c39d2f 321 Gene3D G3DSA:3.50.50.60 125 250 1.1E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 131 143 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 278 296 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 9.3E-75 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 138 158 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 10 315 2.4E-115 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 304 4.9E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P029_02735 a5e3768bd53914576beaefe417c39d2f 321 Gene3D G3DSA:3.50.50.60 11 314 1.1E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_03795 01e426e693f62a6d21249b38f913429f 856 SUPERFAMILY SSF52540 488 763 5.0E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03795 01e426e693f62a6d21249b38f913429f 856 SMART SM00843 794 856 1.5E-26 T 14-10-2018 IPR018541 FtsK gamma domain P029_03795 01e426e693f62a6d21249b38f913429f 856 Pfam PF01580 FtsK/SpoIIIE family 473 692 4.3E-62 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 P029_03795 01e426e693f62a6d21249b38f913429f 856 Gene3D G3DSA:3.30.980.40 365 469 3.4E-27 T 14-10-2018 P029_03795 01e426e693f62a6d21249b38f913429f 856 Pfam PF09397 Ftsk gamma domain 796 854 2.0E-22 T 14-10-2018 IPR018541 FtsK gamma domain P029_03795 01e426e693f62a6d21249b38f913429f 856 Gene3D G3DSA:1.10.10.10 791 855 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_03795 01e426e693f62a6d21249b38f913429f 856 Gene3D G3DSA:3.40.50.300 470 777 4.9E-110 T 14-10-2018 P029_03795 01e426e693f62a6d21249b38f913429f 856 SUPERFAMILY SSF46785 795 855 7.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P029_04570 46010cf975613f1423203e6f1299510e 127 Pfam PF04956 TrbC/VIRB2 family 3 100 7.9E-15 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.1E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:2.40.50.250 486 602 2.0E-126 T 14-10-2018 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF00679 Elongation factor G C-terminus 400 483 2.3E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF54980 402 516 1.1E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.40.50.300 5 200 1.8E-64 T 14-10-2018 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF03144 Elongation factor Tu domain 2 222 292 1.2E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF50447 154 302 2.21E-26 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF52540 5 209 8.43E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.30.70.240 393 485 2.0E-126 T 14-10-2018 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 148 8.7E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:3.30.70.870 310 593 2.0E-126 T 14-10-2018 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 602 6.6E-272 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 SMART SM00838 399 487 0.0018 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Gene3D G3DSA:2.40.30.10 202 302 3.6E-26 T 14-10-2018 P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 SUPERFAMILY SSF54980 307 391 2.73E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like P029_01965 17bcc9b5c6320c0650ffbba086f06a95 612 Pfam PF00009 Elongation factor Tu GTP binding domain 7 197 1.9E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 Hamap MF_00323 Ferrochelatase [hemH]. 3 320 30.002 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 Gene3D G3DSA:3.40.50.1400 4 317 3.5E-93 T 14-10-2018 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 TIGRFAM TIGR00109 hemH: ferrochelatase 3 319 8.5E-75 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 Gene3D G3DSA:3.40.50.1400 164 301 3.5E-93 T 14-10-2018 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 Pfam PF00762 Ferrochelatase 4 318 5.1E-92 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 ProSitePatterns PS00534 Ferrochelatase signature. 193 211 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 P029_01115 0d235a41f13a6afb29acceefb7590a79 320 SUPERFAMILY SSF53800 3 318 6.21E-84 T 14-10-2018 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 PIRSF PIRSF002134 1 123 4.5E-41 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 Gene3D G3DSA:1.10.8.50 1 72 3.6E-25 T 14-10-2018 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 Gene3D G3DSA:4.10.910.10 73 123 1.4E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 25.63 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 SUPERFAMILY SSF46946 2 113 6.22E-43 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.7E-51 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01300 4cbe6406f1e4836c004dff7daf354614 123 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.8E-29 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_05350 5ff6b77d038847e0d709b75e6bf2f7c5 98 Pfam PF01617 Surface antigen 9 72 8.8E-18 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 SMART SM00116 153 201 1.1E-5 T 14-10-2018 IPR000644 CBS domain P029_00415 4a39cf3f5ea873a28215619819f49f68 486 SMART SM00116 92 140 1.2E-12 T 14-10-2018 IPR000644 CBS domain P029_00415 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF51412 3 471 4.97E-118 T 14-10-2018 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 PIRSF PIRSF000130 1 482 3.1E-199 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 SUPERFAMILY SSF54631 59 199 9.24E-33 T 14-10-2018 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 4 467 1.0E-154 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 291 303 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 4 480 79.129 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00571 CBS domain 145 196 8.5E-7 T 14-10-2018 IPR000644 CBS domain P029_00415 4a39cf3f5ea873a28215619819f49f68 486 Pfam PF00571 CBS domain 91 136 3.0E-13 T 14-10-2018 IPR000644 CBS domain P029_00415 4a39cf3f5ea873a28215619819f49f68 486 Gene3D G3DSA:3.20.20.70 1 480 7.0E-204 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 4 448 3.4E-187 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 P029_00415 4a39cf3f5ea873a28215619819f49f68 486 SMART SM01240 3 467 3.9E-300 T 14-10-2018 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 Gene3D G3DSA:3.40.50.300 3 278 3.6E-138 T 14-10-2018 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 Gene3D G3DSA:1.10.150.300 114 198 3.6E-138 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 Gene3D G3DSA:3.10.20.30 49 360 3.6E-138 T 14-10-2018 IPR012675 Beta-grasp domain superfamily P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 SUPERFAMILY SSF81271 279 360 6.1E-34 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.9E-38 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 2.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 2.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 2.6E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 39.934 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 Pfam PF01926 50S ribosome-binding GTPase 5 123 6.7E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 PIRSF PIRSF006641 1 363 6.2E-149 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 362 1.3E-136 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 P029_05190 b6bada5d985193f9c23a097b2af42aa8 363 SUPERFAMILY SSF52540 3 301 3.72E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 TIGRFAM TIGR00433 bioB: biotin synthase 13 309 5.7E-121 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 Pfam PF04055 Radical SAM superfamily 50 206 5.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 Gene3D G3DSA:3.20.20.70 3 313 2.8E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 219 309 3.4E-18 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 Hamap MF_01694 Biotin synthase [bioB]. 4 312 41.864 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 SMART SM00729 42 254 3.4E-38 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 PIRSF PIRSF001619 1 317 1.9E-127 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 SMART SM00876 219 311 2.5E-39 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 P029_00930 f7500a92cf2b04f59eb94c15b1dea2dc 322 SUPERFAMILY SSF102114 4 309 1.02E-86 T 14-10-2018 P029_02385 c311a009122f4517e1cb426094fca634 323 Gene3D G3DSA:1.10.620.20 4 310 1.8E-90 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 P029_02385 c311a009122f4517e1cb426094fca634 323 PIRSF PIRSF000355 3 320 1.6E-101 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_02385 c311a009122f4517e1cb426094fca634 323 Pfam PF00268 Ribonucleotide reductase, small chain 9 284 8.4E-74 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_02385 c311a009122f4517e1cb426094fca634 323 SUPERFAMILY SSF47240 10 321 3.98E-88 T 14-10-2018 IPR009078 Ferritin-like superfamily P029_00870 c61d5f4ef7147be5e0706464a47fc09b 295 SUPERFAMILY SSF55073 199 289 7.85E-8 T 14-10-2018 IPR029787 Nucleotide cyclase P029_00870 c61d5f4ef7147be5e0706464a47fc09b 295 Gene3D G3DSA:3.30.70.270 187 294 5.0E-9 T 14-10-2018 P029_00870 c61d5f4ef7147be5e0706464a47fc09b 295 Pfam PF00990 Diguanylate cyclase, GGDEF domain 199 288 2.4E-5 T 14-10-2018 IPR000160 GGDEF domain P029_01740 40542cb072999761dd94044a48eb2653 264 Pfam PF00950 ABC 3 transport family 8 259 1.0E-50 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 P029_01740 40542cb072999761dd94044a48eb2653 264 SUPERFAMILY SSF81345 5 256 2.35E-22 T 14-10-2018 IPR037294 ABC transporter, BtuC-like P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 7 314 1.7E-116 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 Pfam PF01207 Dihydrouridine synthase (Dus) 11 311 1.1E-103 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 Gene3D G3DSA:3.20.20.70 5 242 9.4E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 Gene3D G3DSA:1.10.1200.80 246 315 3.5E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 SUPERFAMILY SSF51395 8 313 5.13E-90 T 14-10-2018 P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 P029_02440 cc61a3aee9ab3963ae2359b72fe3aa19 315 PIRSF PIRSF006621 1 315 4.0E-103 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Hamap MF_01884 Transcription termination factor Rho [rho]. 32 452 205.668 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00959 36 78 2.4E-11 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:1.10.720.10 32 77 1.4E-9 T 14-10-2018 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF52540 122 405 7.09E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00357 83 149 2.4E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF07497 Rho termination factor, RNA-binding domain 84 154 2.8E-25 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 TIGRFAM TIGR00767 rho: transcription termination factor Rho 34 451 7.2E-193 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:2.40.50.140 78 154 2.2E-27 T 14-10-2018 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SMART SM00382 204 384 8.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF50249 82 153 2.74E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Gene3D G3DSA:3.40.50.300 161 451 6.5E-124 T 14-10-2018 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 193 397 1.7E-27 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 SUPERFAMILY SSF68912 32 77 3.81E-8 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily P029_00285 afb8db8e88c307fcb92c5c40c1f8c4c9 452 Pfam PF07498 Rho termination factor, N-terminal domain 36 74 1.3E-8 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 P029_01040 6848b3767e59a95d639d688c9728780e 206 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 161 6.7E-9 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 P029_01040 6848b3767e59a95d639d688c9728780e 206 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 32 205 9.6E-48 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P029_01040 6848b3767e59a95d639d688c9728780e 206 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 126 8.0E-16 T 14-10-2018 P029_01040 6848b3767e59a95d639d688c9728780e 206 Hamap MF_00013 Octanoyltransferase [lipB]. 1 206 33.032 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P029_01040 6848b3767e59a95d639d688c9728780e 206 SUPERFAMILY SSF55681 5 205 6.63E-60 T 14-10-2018 P029_01040 6848b3767e59a95d639d688c9728780e 206 Gene3D G3DSA:3.30.930.10 3 205 1.7E-62 T 14-10-2018 P029_01040 6848b3767e59a95d639d688c9728780e 206 PIRSF PIRSF016262 2 206 1.1E-56 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P029_05210 e66fc656ac81d5a6229c1b844256cc58 346 SUPERFAMILY SSF56925 39 346 2.16E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05210 e66fc656ac81d5a6229c1b844256cc58 346 Pfam PF01617 Surface antigen 39 346 6.8E-48 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01340 8bed4fead117e988df765da5f944c6b7 292 Gene3D G3DSA:1.10.357.140 21 173 5.2E-36 T 14-10-2018 P029_01340 8bed4fead117e988df765da5f944c6b7 292 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site P029_01340 8bed4fead117e988df765da5f944c6b7 292 Gene3D G3DSA:1.20.120.1780 174 292 5.3E-17 T 14-10-2018 P029_01340 8bed4fead117e988df765da5f944c6b7 292 Pfam PF01040 UbiA prenyltransferase family 31 272 1.9E-50 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 SUPERFAMILY SSF56327 148 316 3.6E-51 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 318 41.695 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 7 316 1.6E-107 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 315 2.1E-27 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 PIRSF PIRSF000102 3 321 2.4E-102 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 8.5E-38 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 Gene3D G3DSA:3.90.110.10 151 320 2.6E-55 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 Gene3D G3DSA:3.40.50.720 2 149 1.5E-48 T 14-10-2018 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 SUPERFAMILY SSF51735 7 148 1.68E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 5.2E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 5.2E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 5.2E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 5.2E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P029_02625 f3deaec6518ae52fc1d2977e53cf5ec8 321 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 5.2E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Gene3D G3DSA:3.30.930.10 123 584 2.8E-164 T 14-10-2018 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 SUPERFAMILY SSF55681 124 560 1.11E-93 T 14-10-2018 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Pfam PF02938 GAD domain 316 407 1.2E-13 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Gene3D G3DSA:3.30.1360.30 280 424 2.8E-164 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 1.1E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.1E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 1.1E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.1E-21 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 561 5.9E-94 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 587 29.707 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 SUPERFAMILY SSF55261 297 424 5.56E-31 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Gene3D G3DSA:2.40.50.140 1 107 2.1E-30 T 14-10-2018 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 SUPERFAMILY SSF50249 4 109 1.03E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 Pfam PF01336 OB-fold nucleic acid binding domain 21 85 9.8E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 P029_00815 8e41384b55a4b5818146a15bc5aa3d3a 598 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 585 2.8E-180 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 622 39.015 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 SMART SM01228 544 615 1.3E-34 T 14-10-2018 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 SUPERFAMILY SSF51905 2 260 3.33E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 Gene3D G3DSA:1.10.150.570 567 619 3.2E-20 T 14-10-2018 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 Gene3D G3DSA:3.50.50.60 296 460 6.3E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 Gene3D G3DSA:3.50.50.60 1 221 1.7E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 Pfam PF13932 GidA associated domain 403 613 1.7E-70 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 618 1.4E-238 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 P029_00955 51371c1dd6126048cb5cccf9312cd0cb 628 Pfam PF01134 Glucose inhibited division protein A 5 396 4.5E-157 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 P029_02435 dff6cfab1b7e148ca7251214158204fc 296 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 4 285 28.125 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 P029_02435 dff6cfab1b7e148ca7251214158204fc 296 SUPERFAMILY SSF55060 165 280 1.63E-20 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily P029_02435 dff6cfab1b7e148ca7251214158204fc 296 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 262 1.1E-46 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 P029_02435 dff6cfab1b7e148ca7251214158204fc 296 Pfam PF00288 GHMP kinases N terminal domain 89 140 2.5E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 P029_02435 dff6cfab1b7e148ca7251214158204fc 296 Gene3D G3DSA:3.30.230.10 1 158 3.1E-41 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_02435 dff6cfab1b7e148ca7251214158204fc 296 SUPERFAMILY SSF54211 4 157 1.75E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_02435 dff6cfab1b7e148ca7251214158204fc 296 Pfam PF08544 GHMP kinases C terminal 207 273 3.1E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain P029_02435 dff6cfab1b7e148ca7251214158204fc 296 PIRSF PIRSF010376 2 291 3.3E-68 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 P029_02435 dff6cfab1b7e148ca7251214158204fc 296 Gene3D G3DSA:3.30.70.890 164 287 6.9E-20 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily P029_05335 2d07180fb8fc7c129763e130cb44a9a4 405 Pfam PF01617 Surface antigen 27 397 1.2E-72 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05335 2d07180fb8fc7c129763e130cb44a9a4 405 Gene3D G3DSA:2.40.160.20 227 389 2.2E-9 T 14-10-2018 P029_05335 2d07180fb8fc7c129763e130cb44a9a4 405 SUPERFAMILY SSF56925 27 384 1.41E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_03980 0697d4108858ac18e3518f8358e0cc02 260 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 1 252 2.3E-73 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P029_03980 0697d4108858ac18e3518f8358e0cc02 260 SUPERFAMILY SSF53613 1 255 3.6E-63 T 14-10-2018 IPR029056 Ribokinase-like P029_03980 0697d4108858ac18e3518f8358e0cc02 260 Gene3D G3DSA:3.40.1190.20 1 257 2.4E-81 T 14-10-2018 IPR029056 Ribokinase-like P029_03980 0697d4108858ac18e3518f8358e0cc02 260 Pfam PF08543 Phosphomethylpyrimidine kinase 8 249 1.4E-75 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 P029_02745 52a82c5522271b9f302c39f3e70ecfde 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 231 244 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 P029_02745 52a82c5522271b9f302c39f3e70ecfde 394 Gene3D G3DSA:3.90.1150.10 23 385 1.5E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_02745 52a82c5522271b9f302c39f3e70ecfde 394 Gene3D G3DSA:3.40.640.10 61 281 1.5E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_02745 52a82c5522271b9f302c39f3e70ecfde 394 SUPERFAMILY SSF53383 2 390 2.26E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_02745 52a82c5522271b9f302c39f3e70ecfde 394 Pfam PF00155 Aminotransferase class I and II 30 386 2.7E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P029_03145 340e8e673c77579d44c13193b984b185 93 SMART SM01387 8 89 1.6E-35 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_03145 340e8e673c77579d44c13193b984b185 93 Pfam PF00312 Ribosomal protein S15 8 89 2.9E-28 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_03145 340e8e673c77579d44c13193b984b185 93 SUPERFAMILY SSF47060 3 90 4.71E-28 T 14-10-2018 IPR009068 S15/NS1, RNA-binding P029_03145 340e8e673c77579d44c13193b984b185 93 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 1.3E-30 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_03145 340e8e673c77579d44c13193b984b185 93 Gene3D G3DSA:1.10.287.10 1 90 1.1E-27 T 14-10-2018 P029_03145 340e8e673c77579d44c13193b984b185 93 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 89 8.0E-36 T 14-10-2018 P029_03145 340e8e673c77579d44c13193b984b185 93 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 90 19.402 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04325 f394031541d107c25c2f2c823211c46e 513 Gene3D G3DSA:3.40.50.620 6 338 1.9E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_04325 f394031541d107c25c2f2c823211c46e 513 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 148 508 7.1E-102 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 SUPERFAMILY SSF47323 354 507 3.36E-32 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_04325 f394031541d107c25c2f2c823211c46e 513 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 508 42.296 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 Gene3D G3DSA:1.10.730.10 342 512 2.4E-38 T 14-10-2018 P029_04325 f394031541d107c25c2f2c823211c46e 513 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 3 133 1.3E-11 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_04325 f394031541d107c25c2f2c823211c46e 513 SUPERFAMILY SSF52374 3 351 2.2E-103 T 14-10-2018 P029_04325 f394031541d107c25c2f2c823211c46e 513 Gene3D G3DSA:2.170.220.10 117 227 1.9E-140 T 14-10-2018 P029_04325 f394031541d107c25c2f2c823211c46e 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 1.3E-30 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.3E-30 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.3E-30 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 224 235 1.3E-30 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.3E-30 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 1.3E-30 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 P029_04325 f394031541d107c25c2f2c823211c46e 513 Pfam PF09334 tRNA synthetases class I (M) 145 365 7.3E-64 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 SUPERFAMILY SSF53067 183 359 2.44E-33 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Gene3D G3DSA:3.30.420.40 2 352 9.6E-80 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Hamap MF_02033 Cell division protein FtsA [ftsA]. 1 392 19.437 T 14-10-2018 IPR020823 Cell division protein FtsA P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Gene3D G3DSA:3.30.420.40 182 333 9.6E-80 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Gene3D G3DSA:3.30.1490.110 73 154 9.6E-80 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Pfam PF14450 Cell division protein FtsA 193 356 1.8E-17 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Gene3D G3DSA:3.90.640.10 220 284 9.6E-80 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 1 356 2.5E-81 T 14-10-2018 IPR020823 Cell division protein FtsA P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 SMART SM00842 1 181 4.8E-52 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 SUPERFAMILY SSF53067 2 182 1.77E-32 T 14-10-2018 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 Pfam PF02491 SHS2 domain inserted in FTSA 74 147 7.7E-11 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 P029_04725 ce2db23f4d205e2df5d009b89dd070a4 394 PIRSF PIRSF003101 1 391 3.9E-92 T 14-10-2018 IPR020823 Cell division protein FtsA P029_01455 8549a295dafc5c2774007b45ad480eb1 491 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 148 488 8.0E-31 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 SUPERFAMILY SSF55486 1 489 3.91E-51 T 14-10-2018 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 Gene3D G3DSA:1.10.1370.30 1 490 3.0E-95 T 14-10-2018 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 PIRSF PIRSF006615 32 491 4.4E-68 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 395 416 2.9E-12 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 326 345 2.9E-12 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 440 458 2.9E-12 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 P029_01455 8549a295dafc5c2774007b45ad480eb1 491 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 372 389 2.9E-12 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 P029_02290 b510102409da03e5d130418a495b45b3 954 SUPERFAMILY SSF52540 622 921 1.77E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02290 b510102409da03e5d130418a495b45b3 954 SUPERFAMILY SSF52540 6 580 4.31E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02290 b510102409da03e5d130418a495b45b3 954 ProSitePatterns PS00211 ABC transporters family signature. 838 852 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_02290 b510102409da03e5d130418a495b45b3 954 Gene3D G3DSA:1.20.1580.10 701 838 1.0E-130 T 14-10-2018 P029_02290 b510102409da03e5d130418a495b45b3 954 Gene3D G3DSA:3.40.50.300 8 606 1.7E-210 T 14-10-2018 P029_02290 b510102409da03e5d130418a495b45b3 954 Gene3D G3DSA:3.40.50.300 622 945 1.0E-130 T 14-10-2018 P029_02290 b510102409da03e5d130418a495b45b3 954 Gene3D G3DSA:1.10.8.280 298 412 1.7E-210 T 14-10-2018 P029_02290 b510102409da03e5d130418a495b45b3 954 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 932 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 P029_02290 b510102409da03e5d130418a495b45b3 954 Gene3D G3DSA:1.20.1580.10 92 503 1.7E-210 T 14-10-2018 P029_02290 b510102409da03e5d130418a495b45b3 954 Gene3D G3DSA:3.30.190.20 132 248 1.7E-210 T 14-10-2018 P029_01875 294b8ada77cb82c0908c1259010ee732 363 Gene3D G3DSA:1.10.1040.10 168 283 4.1E-7 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P029_01875 294b8ada77cb82c0908c1259010ee732 363 SUPERFAMILY SSF48179 173 268 6.21E-8 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P029_05295 9ebfdbad680469b372d91b2e9f19ebf6 98 Gene3D G3DSA:4.10.520.10 3 97 1.3E-20 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P029_05295 9ebfdbad680469b372d91b2e9f19ebf6 98 Pfam PF00216 Bacterial DNA-binding protein 5 94 8.9E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P029_05295 9ebfdbad680469b372d91b2e9f19ebf6 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 50 69 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 P029_05295 9ebfdbad680469b372d91b2e9f19ebf6 98 SMART SM00411 5 94 1.5E-13 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P029_05295 9ebfdbad680469b372d91b2e9f19ebf6 98 SUPERFAMILY SSF47729 5 95 3.09E-21 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 Gene3D G3DSA:2.40.30.30 184 303 2.2E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 SMART SM00904 179 303 7.7E-55 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 SUPERFAMILY SSF82114 170 300 6.1E-43 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 Gene3D G3DSA:3.40.50.620 4 183 8.1E-54 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_04770 6ebea6506c942407cddd2bb937dd265c 303 Pfam PF06574 FAD synthetase 9 161 3.2E-45 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 14 297 1.7E-77 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 SUPERFAMILY SSF52374 13 171 5.63E-31 T 14-10-2018 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 Pfam PF01687 Riboflavin kinase 180 300 4.8E-36 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 P029_04770 6ebea6506c942407cddd2bb937dd265c 303 PIRSF PIRSF004491 2 303 1.1E-99 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 PIRSF PIRSF036773 1 188 7.8E-65 T 14-10-2018 IPR035433 NFU1-like P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 128 188 9.0E-27 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 SMART SM00932 3 90 7.6E-43 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 SUPERFAMILY SSF110836 1 87 3.66E-27 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 SUPERFAMILY SSF117916 105 187 1.05E-24 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 Gene3D G3DSA:3.30.300.130 109 188 8.5E-26 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 3 87 4.6E-28 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 Pfam PF01106 NifU-like domain 120 186 5.9E-25 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 P029_00305 b36c4c5c800be360cc60d8f0be17fef4 188 Gene3D G3DSA:3.30.1370.70 1 93 6.9E-28 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 TIGRFAM TIGR00158 L9: ribosomal protein bL9 3 146 1.3E-29 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 2 147 20.885 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 9.3E-19 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 Pfam PF01281 Ribosomal protein L9, N-terminal domain 4 45 1.5E-13 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 Gene3D G3DSA:3.10.430.100 61 147 6.2E-19 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 SUPERFAMILY SSF55653 58 147 1.57E-21 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 Gene3D G3DSA:3.40.5.10 2 50 1.0E-12 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00655 3a5f572e5ba48da1b14becd4ae389e7e 205 SUPERFAMILY SSF55658 3 56 1.29E-10 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal P029_01880 a9c4b442d786e865edadb84dfab83daf 427 Gene3D G3DSA:3.10.20.600 233 329 6.6E-42 T 14-10-2018 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 Gene3D G3DSA:3.40.50.11540 52 232 3.6E-77 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 SUPERFAMILY SSF140490 328 422 5.62E-33 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 Gene3D G3DSA:1.20.1440.230 330 427 2.3E-33 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 8 416 2.1E-186 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 Pfam PF10531 SLBB domain 243 294 1.6E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 SUPERFAMILY SSF142984 242 327 2.48E-25 T 14-10-2018 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 219 2.5E-48 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 SMART SM00928 332 377 9.2E-23 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 345 356 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 SUPERFAMILY SSF142019 7 241 7.32E-82 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01880 a9c4b442d786e865edadb84dfab83daf 427 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 334 416 4.9E-27 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 353 428 2.7E-19 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 Gene3D G3DSA:1.10.275.10 1 94 2.1E-26 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 Gene3D G3DSA:1.20.200.10 95 350 2.8E-84 T 14-10-2018 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 ProSitePatterns PS00163 Fumarate lyases signature. 263 272 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00145 Argininosuccinate lyase family signature 130 150 1.8E-6 T 14-10-2018 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00145 Argininosuccinate lyase family signature 89 111 1.8E-6 T 14-10-2018 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00145 Argininosuccinate lyase family signature 218 242 1.8E-6 T 14-10-2018 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00145 Argininosuccinate lyase family signature 263 279 1.8E-6 T 14-10-2018 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 429 7.1E-142 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 3.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00149 Fumarate lyase superfamily signature 90 108 3.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00149 Fumarate lyase superfamily signature 218 245 3.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 PRINTS PR00149 Fumarate lyase superfamily signature 263 279 3.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 SMART SM00998 351 429 2.6E-26 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 Gene3D G3DSA:1.10.40.30 351 428 1.1E-20 T 14-10-2018 P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 Pfam PF00206 Lyase 9 285 2.3E-45 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal P029_03505 7a446cc26a80eae8263b6e7af1e4d1cd 432 SUPERFAMILY SSF48557 4 429 4.08E-117 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 SMART SM00863 658 700 4.2E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 SUPERFAMILY SSF101353 247 443 2.48E-54 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Gene3D G3DSA:2.40.30.130 450 556 7.7E-10 T 14-10-2018 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 848 2.7E-260 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Gene3D G3DSA:3.30.930.10 3 243 1.1E-104 T 14-10-2018 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 200 211 5.7E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 272 288 5.7E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 227 240 5.7E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 5.7E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 296 309 5.7E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 SUPERFAMILY SSF55186 556 711 2.75E-45 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Gene3D G3DSA:3.30.980.10 567 701 2.4E-44 T 14-10-2018 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 658 700 7.5E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 SUPERFAMILY SSF55681 6 246 5.47E-102 T 14-10-2018 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 156.628 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Pfam PF01411 tRNA synthetases class II (A) 9 560 6.1E-202 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Gene3D G3DSA:3.30.54.20 628 681 2.4E-44 T 14-10-2018 P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 SUPERFAMILY SSF50447 455 556 1.84E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_04250 1d0e1434d2baf330549a0e7446ff8912 876 Gene3D G3DSA:3.10.310.40 765 868 2.3E-8 T 14-10-2018 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 Pfam PF00557 Metallopeptidase family M24 15 245 3.6E-50 T 14-10-2018 IPR000994 Peptidase M24 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 6 252 1.2E-91 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 170 188 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 7.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 164 176 7.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 71 84 7.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 195 207 7.3E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 SUPERFAMILY SSF55920 6 259 6.15E-83 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 Hamap MF_01974 Methionine aminopeptidase [map]. 6 254 39.094 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 P029_04880 9f1c0fef90614c0ff4a331cce90eed4d 264 Gene3D G3DSA:3.90.230.10 3 263 2.4E-106 T 14-10-2018 P029_05145 a3707dee225b697293d8489040a8a152 211 SUPERFAMILY SSF50715 6 193 6.45E-52 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P029_05145 a3707dee225b697293d8489040a8a152 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 99 2.0E-38 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 P029_05145 a3707dee225b697293d8489040a8a152 211 Pfam PF01386 Ribosomal L25p family 11 96 9.4E-23 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 P029_05145 a3707dee225b697293d8489040a8a152 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 7 189 28.155 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 P029_05145 a3707dee225b697293d8489040a8a152 211 Gene3D G3DSA:2.170.120.20 101 195 1.6E-22 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal P029_05145 a3707dee225b697293d8489040a8a152 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 188 7.8E-25 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain P029_05145 a3707dee225b697293d8489040a8a152 211 Gene3D G3DSA:2.40.240.10 4 99 1.9E-26 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P029_05145 a3707dee225b697293d8489040a8a152 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 11 187 1.0E-48 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.7E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 3.1E-5 T 14-10-2018 P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 SUPERFAMILY SSF51735 5 244 4.6E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 Gene3D G3DSA:3.40.50.720 1 244 5.8E-80 T 14-10-2018 P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 7.8E-64 T 14-10-2018 P029_02770 0ac52dbd9e9e9bdae78ef875aa3fb463 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 242 6.6E-92 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 Gene3D G3DSA:3.30.160.20 152 221 1.2E-19 T 14-10-2018 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 Pfam PF14622 Ribonuclease-III-like 15 139 3.7E-30 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 SUPERFAMILY SSF54768 109 220 6.29E-26 T 14-10-2018 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 SMART SM00535 17 148 8.8E-43 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 SUPERFAMILY SSF69065 3 156 6.1E-45 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 7 218 6.3E-70 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 SMART SM00358 154 220 2.3E-18 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain P029_04650 12820e40bb3804d322925c49b1cc2a89 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 5 216 27.014 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 Gene3D G3DSA:1.10.1520.10 2 143 1.2E-40 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 P029_04650 12820e40bb3804d322925c49b1cc2a89 225 Pfam PF00035 Double-stranded RNA binding motif 154 218 1.7E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain P029_02780 404d35b20fc02be1468401dc7d7959bf 234 Gene3D G3DSA:3.40.50.1820 2 227 1.1E-64 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_02780 404d35b20fc02be1468401dc7d7959bf 234 SUPERFAMILY SSF53474 3 216 6.11E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_02780 404d35b20fc02be1468401dc7d7959bf 234 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 50 203 2.7E-10 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 P029_05785 e6100ad35c0b59bb3690ae72d9c68b90 332 SUPERFAMILY SSF52540 11 311 4.15E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05785 e6100ad35c0b59bb3690ae72d9c68b90 332 Gene3D G3DSA:3.30.450.90 7 113 1.8E-31 T 14-10-2018 P029_05785 e6100ad35c0b59bb3690ae72d9c68b90 332 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 19 324 1.2E-126 T 14-10-2018 IPR014155 Type IV secretion system protein VirB11 GO:0043684|GO:0044097 P029_05785 e6100ad35c0b59bb3690ae72d9c68b90 332 Pfam PF00437 Type II/IV secretion system protein 13 312 1.8E-84 T 14-10-2018 IPR001482 Type II/IV secretion system protein P029_05785 e6100ad35c0b59bb3690ae72d9c68b90 332 Gene3D G3DSA:3.40.50.300 115 330 7.9E-68 T 14-10-2018 P029_01315 327d21e1c1f3e30dccc68b3031d2c3ff 132 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 122 3.3E-35 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01315 327d21e1c1f3e30dccc68b3031d2c3ff 132 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 121 23.366 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01315 327d21e1c1f3e30dccc68b3031d2c3ff 132 Pfam PF01196 Ribosomal protein L17 20 121 2.5E-28 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01315 327d21e1c1f3e30dccc68b3031d2c3ff 132 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01315 327d21e1c1f3e30dccc68b3031d2c3ff 132 SUPERFAMILY SSF64263 1 124 1.96E-40 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01315 327d21e1c1f3e30dccc68b3031d2c3ff 132 Gene3D G3DSA:3.90.1030.10 3 128 1.6E-40 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01920 0d5c0bc69aa2471dd19b64c5c098d640 403 Pfam PF04551 GcpE protein 8 395 1.1E-93 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P029_01920 0d5c0bc69aa2471dd19b64c5c098d640 403 Gene3D G3DSA:3.30.413.10 289 403 4.8E-35 T 14-10-2018 P029_01920 0d5c0bc69aa2471dd19b64c5c098d640 403 Gene3D G3DSA:3.20.20.20 3 288 2.2E-75 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P029_01920 0d5c0bc69aa2471dd19b64c5c098d640 403 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 5 394 7.9E-95 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P029_01920 0d5c0bc69aa2471dd19b64c5c098d640 403 PIRSF PIRSF004640 2 403 1.3E-120 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 PIRSF PIRSF036684 2 750 0.0 T 14-10-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 ProSitePatterns PS00331 Malic enzymes signature. 161 177 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 SUPERFAMILY SSF53659 432 747 4.52E-75 T 14-10-2018 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Gene3D G3DSA:3.40.50.720 163 442 9.9E-78 T 14-10-2018 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Gene3D G3DSA:3.40.50.10750 572 722 3.9E-80 T 14-10-2018 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Pfam PF01515 Phosphate acetyl/butaryl transferase 437 744 2.8E-73 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 SMART SM01274 20 153 1.3E-74 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 SUPERFAMILY SSF51735 165 453 2.96E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 SMART SM00919 165 402 1.3E-130 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Gene3D G3DSA:3.40.50.10950 445 745 3.9E-80 T 14-10-2018 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Pfam PF03949 Malic enzyme, NAD binding domain 167 358 7.2E-20 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Pfam PF00390 Malic enzyme, N-terminal domain 22 152 1.1E-23 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 SUPERFAMILY SSF53223 12 163 3.67E-51 T 14-10-2018 P029_00185 d97a00158cc3aeaf983519c0e379adc3 751 Gene3D G3DSA:3.40.50.10380 2 162 1.9E-63 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 P029_00570 2013574317c68a5e9dae4761ac2a81e1 185 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 13 182 4.1E-45 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 P029_00570 2013574317c68a5e9dae4761ac2a81e1 185 Hamap MF_00146 dCTP deaminase [dcd]. 1 184 26.557 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 P029_00570 2013574317c68a5e9dae4761ac2a81e1 185 Gene3D G3DSA:2.70.40.10 1 157 4.8E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily P029_00570 2013574317c68a5e9dae4761ac2a81e1 185 SUPERFAMILY SSF51283 3 183 3.01E-48 T 14-10-2018 IPR036157 dUTPase-like superfamily P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 112 5.5E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-34 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-34 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-34 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.445 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 69 3.0E-8 T 14-10-2018 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 Gene3D G3DSA:1.10.1900.20 56 118 1.4E-24 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 SUPERFAMILY SSF74731 3 115 3.53E-45 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 Gene3D G3DSA:1.10.720.90 2 55 3.5E-22 T 14-10-2018 P029_00270 1a2faa9fdafd184b4b98e8dd6ff6593b 128 Pfam PF00453 Ribosomal protein L20 3 109 4.2E-45 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 461 2.4E-145 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 SUPERFAMILY SSF52374 2 317 1.45E-85 T 14-10-2018 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 461 36.818 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 Gene3D G3DSA:1.20.120.640 311 461 5.0E-27 T 14-10-2018 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 318 2.2E-112 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 Pfam PF09190 DALR domain 351 399 1.3E-9 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 SUPERFAMILY SSF47323 345 459 2.09E-25 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 Gene3D G3DSA:3.40.50.620 1 310 1.9E-118 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 SMART SM00840 348 410 3.7E-8 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 6.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 6.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 6.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P029_02375 aa79da285b3aa3cf3c4f8e9e3e1971a9 462 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 6.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 8 18 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 328 2.5E-95 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 Gene3D G3DSA:3.40.50.620 2 327 3.0E-125 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_00150 a34631d52bc64c35339e2195caa53eb6 331 Gene3D G3DSA:1.10.240.10 185 296 3.0E-125 T 14-10-2018 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 194 204 3.7E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 3.7E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 3.7E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 3.7E-28 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 SUPERFAMILY SSF52374 1 328 3.46E-89 T 14-10-2018 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 Pfam PF00579 tRNA synthetases class I (W and Y) 2 282 6.1E-73 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00150 a34631d52bc64c35339e2195caa53eb6 331 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 329 37.529 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 P029_00330 d736482a5c90b670eef9efb9519e5114 450 Gene3D G3DSA:3.40.50.620 1 314 1.4E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_00330 d736482a5c90b670eef9efb9519e5114 450 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 441 8.3E-104 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_00330 d736482a5c90b670eef9efb9519e5114 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 18 29 1.5E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_00330 d736482a5c90b670eef9efb9519e5114 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 4 16 1.5E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_00330 d736482a5c90b670eef9efb9519e5114 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 1.5E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_00330 d736482a5c90b670eef9efb9519e5114 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 33 46 1.5E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_00330 d736482a5c90b670eef9efb9519e5114 450 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 1.5E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_00330 d736482a5c90b670eef9efb9519e5114 450 SUPERFAMILY SSF48163 281 441 4.05E-24 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_00330 d736482a5c90b670eef9efb9519e5114 450 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 7 18 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_00330 d736482a5c90b670eef9efb9519e5114 450 Gene3D G3DSA:1.10.10.350 355 444 5.4E-12 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_00330 d736482a5c90b670eef9efb9519e5114 450 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 272 5.8E-74 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 P029_00330 d736482a5c90b670eef9efb9519e5114 450 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 444 25.231 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_00330 d736482a5c90b670eef9efb9519e5114 450 SUPERFAMILY SSF52374 2 296 2.95E-86 T 14-10-2018 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 Pfam PF01479 S4 domain 94 140 9.7E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 7 203 5.0E-64 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 27.756 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 SMART SM01390 6 92 2.8E-25 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 SUPERFAMILY SSF55174 8 203 1.14E-52 T 14-10-2018 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 Gene3D G3DSA:1.10.1050.10 8 203 3.5E-61 T 14-10-2018 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 SMART SM00363 93 157 9.0E-16 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 92 4.4E-19 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 P029_03955 2d53349af3acf07ece88dd3aa4d98a77 204 Gene3D G3DSA:3.10.290.10 92 187 3.5E-61 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P029_02320 6eac12f8dfbb09dfcfa5182d5d38a35f 281 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 62 84 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P029_02320 6eac12f8dfbb09dfcfa5182d5d38a35f 281 Pfam PF01066 CDP-alcohol phosphatidyltransferase 21 84 1.1E-13 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 P029_02320 6eac12f8dfbb09dfcfa5182d5d38a35f 281 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 26 198 7.0E-33 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 P029_02320 6eac12f8dfbb09dfcfa5182d5d38a35f 281 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 210 246 1.3E-9 T 14-10-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal P029_02320 6eac12f8dfbb09dfcfa5182d5d38a35f 281 Gene3D G3DSA:1.20.120.1760 13 197 1.7E-14 T 14-10-2018 P029_04435 2d2ad320195bafe9ef7ef3953675a963 154 SUPERFAMILY SSF54211 29 154 1.67E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_04435 2d2ad320195bafe9ef7ef3953675a963 154 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 25 154 28.969 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid P029_04435 2d2ad320195bafe9ef7ef3953675a963 154 Gene3D G3DSA:3.30.230.10 26 154 2.9E-46 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_04435 2d2ad320195bafe9ef7ef3953675a963 154 Pfam PF00380 Ribosomal protein S9/S16 34 154 9.9E-42 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 P029_04435 2d2ad320195bafe9ef7ef3953675a963 154 ProSitePatterns PS00360 Ribosomal protein S9 signature. 93 111 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 P029_05245 cf328977dce4424aa7f3ed739646ca31 403 Pfam PF08886 Glutamate-cysteine ligase 7 388 1.3E-139 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA P029_05245 cf328977dce4424aa7f3ed739646ca31 403 Gene3D G3DSA:3.40.50.11280 51 186 5.1E-30 T 14-10-2018 P029_05245 cf328977dce4424aa7f3ed739646ca31 403 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 10 388 8.5E-115 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA P029_00800 e5ab9489aa54360ed70feffae4f4fd2b 207 SUPERFAMILY SSF56784 4 182 9.41E-32 T 14-10-2018 IPR036412 HAD-like superfamily P029_00800 e5ab9489aa54360ed70feffae4f4fd2b 207 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 174 2.5E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 P029_00800 e5ab9489aa54360ed70feffae4f4fd2b 207 Gene3D G3DSA:1.10.150.730 19 79 1.5E-47 T 14-10-2018 P029_00800 e5ab9489aa54360ed70feffae4f4fd2b 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 176 5.2E-28 T 14-10-2018 P029_00800 e5ab9489aa54360ed70feffae4f4fd2b 207 Gene3D G3DSA:3.40.50.1000 7 179 1.5E-47 T 14-10-2018 IPR023214 HAD superfamily P029_03820 aae52e8d112276c0597d4902c33233ac 275 Gene3D G3DSA:3.40.250.10 96 248 5.4E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily P029_03820 aae52e8d112276c0597d4902c33233ac 275 Pfam PF00581 Rhodanese-like domain 118 208 1.3E-9 T 14-10-2018 IPR001763 Rhodanese-like domain P029_03820 aae52e8d112276c0597d4902c33233ac 275 SUPERFAMILY SSF52821 89 225 1.32E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily P029_03820 aae52e8d112276c0597d4902c33233ac 275 Gene3D G3DSA:3.30.70.100 1 95 4.7E-33 T 14-10-2018 P029_03820 aae52e8d112276c0597d4902c33233ac 275 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 254 39.083 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 P029_03820 aae52e8d112276c0597d4902c33233ac 275 SMART SM00450 112 214 3.3E-17 T 14-10-2018 IPR001763 Rhodanese-like domain P029_00100 de47b76ad25ffac18bdb17a97d640413 289 Gene3D G3DSA:3.30.465.10 192 287 9.4E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P029_00100 de47b76ad25ffac18bdb17a97d640413 289 SUPERFAMILY SSF54631 56 186 1.11E-25 T 14-10-2018 P029_00100 de47b76ad25ffac18bdb17a97d640413 289 SUPERFAMILY SSF56176 196 279 6.27E-16 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P029_00100 de47b76ad25ffac18bdb17a97d640413 289 Gene3D G3DSA:3.10.580.10 54 191 3.1E-45 T 14-10-2018 P029_00100 de47b76ad25ffac18bdb17a97d640413 289 SMART SM01091 199 282 1.3E-19 T 14-10-2018 IPR005170 Transporter-associated domain P029_00100 de47b76ad25ffac18bdb17a97d640413 289 Pfam PF03471 Transporter associated domain 201 280 1.1E-13 T 14-10-2018 IPR005170 Transporter-associated domain P029_00100 de47b76ad25ffac18bdb17a97d640413 289 Pfam PF00571 CBS domain 129 180 1.5E-4 T 14-10-2018 IPR000644 CBS domain P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 Gene3D G3DSA:1.25.40.20 5 278 8.7E-15 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SUPERFAMILY SSF48403 525 891 4.97E-8 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 Gene3D G3DSA:1.25.40.20 1304 1450 1.2E-11 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 Gene3D G3DSA:1.25.40.20 722 1036 1.3E-9 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 1916 1945 350.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 550 579 59.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 52 88 1600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 1949 1990 0.061 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 1176 1210 2100.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 1368 1403 4100.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 126 159 2900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 789 820 77.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 1335 1364 6.4E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 1592 1622 8.6 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SMART SM00248 164 193 0.95 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SUPERFAMILY SSF48403 1138 2007 4.97E-24 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_02935 8ca5025dacee4242c7604e28116e78ba 3561 SUPERFAMILY SSF48403 18 265 2.6E-12 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03930 6cd9449fec0ac6a4626ae3a9afa630c8 483 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 29 413 2.1E-147 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 P029_03930 6cd9449fec0ac6a4626ae3a9afa630c8 483 Pfam PF03109 ABC1 family 98 215 4.2E-31 T 14-10-2018 IPR004147 UbiB domain P029_03930 6cd9449fec0ac6a4626ae3a9afa630c8 483 SUPERFAMILY SSF56112 81 409 8.44E-32 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily P029_03930 6cd9449fec0ac6a4626ae3a9afa630c8 483 Gene3D G3DSA:1.10.510.10 239 369 2.1E-7 T 14-10-2018 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 ProSitePatterns PS00480 Citrate synthase signature. 296 308 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 SUPERFAMILY SSF48256 6 410 3.01E-136 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 Gene3D G3DSA:1.10.580.10 55 393 4.1E-126 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 Pfam PF00285 Citrate synthase, C-terminal domain 45 405 9.2E-119 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PRINTS PR00143 Citrate synthase signature 160 173 1.6E-47 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PRINTS PR00143 Citrate synthase signature 212 227 1.6E-47 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PRINTS PR00143 Citrate synthase signature 289 309 1.6E-47 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PRINTS PR00143 Citrate synthase signature 234 262 1.6E-47 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PRINTS PR00143 Citrate synthase signature 352 368 1.6E-47 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PRINTS PR00143 Citrate synthase signature 372 386 1.6E-47 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 12 411 1.0E-154 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 Gene3D G3DSA:2.20.28.60 1 49 2.0E-16 T 14-10-2018 P029_05250 7c7096083f5676adaf9d3bc4de718336 411 Gene3D G3DSA:1.10.230.10 261 369 4.1E-126 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain P029_05250 7c7096083f5676adaf9d3bc4de718336 411 PIRSF PIRSF001369 36 411 1.0E-136 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type P029_04010 41bfc23be720b965b2e062afa646cbcc 93 PIRSF PIRSF000178 1 91 5.8E-19 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04010 41bfc23be720b965b2e062afa646cbcc 93 SUPERFAMILY SSF81343 3 88 6.32E-13 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04010 41bfc23be720b965b2e062afa646cbcc 93 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 2 88 5.8E-21 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04010 41bfc23be720b965b2e062afa646cbcc 93 Gene3D G3DSA:1.20.1300.10 1 89 7.1E-16 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04010 41bfc23be720b965b2e062afa646cbcc 93 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 47 60 - T 14-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04010 41bfc23be720b965b2e062afa646cbcc 93 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 84 5.4E-13 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_04225 8fa612e90feab1ee2cf25646362e5a31 339 Pfam PF12849 PBP superfamily domain 22 303 6.3E-33 T 14-10-2018 IPR024370 PBP domain P029_04225 8fa612e90feab1ee2cf25646362e5a31 339 Gene3D G3DSA:3.40.190.10 24 305 1.1E-46 T 14-10-2018 P029_04225 8fa612e90feab1ee2cf25646362e5a31 339 SUPERFAMILY SSF53850 19 336 9.05E-58 T 14-10-2018 P029_04225 8fa612e90feab1ee2cf25646362e5a31 339 Gene3D G3DSA:3.40.190.10 108 278 1.1E-46 T 14-10-2018 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 764 904 5.9E-43 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Gene3D G3DSA:3.40.50.11610 702 902 1.3E-161 T 14-10-2018 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Pfam PF00676 Dehydrogenase E1 component 186 496 6.1E-56 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Pfam PF02779 Transketolase, pyrimidine binding domain 565 759 2.5E-67 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P029_03495 3ad51a57b797322cff1cc806db03dff2 905 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 903 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Gene3D G3DSA:3.40.50.970 140 501 3.1E-141 T 14-10-2018 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 SUPERFAMILY SSF52518 116 510 4.18E-81 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_03495 3ad51a57b797322cff1cc806db03dff2 905 PIRSF PIRSF000157 2 905 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Gene3D G3DSA:3.40.50.12470 525 780 1.3E-161 T 14-10-2018 P029_03495 3ad51a57b797322cff1cc806db03dff2 905 SMART SM00861 566 759 1.4E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P029_03495 3ad51a57b797322cff1cc806db03dff2 905 SUPERFAMILY SSF52518 562 765 6.99E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_03495 3ad51a57b797322cff1cc806db03dff2 905 Gene3D G3DSA:1.10.287.1150 67 139 3.9E-6 T 14-10-2018 P029_03760 441b50bd6e6c904864e7d5a38c9ecd58 76 SUPERFAMILY SSF74653 8 73 1.04E-5 T 14-10-2018 P029_03760 441b50bd6e6c904864e7d5a38c9ecd58 76 Gene3D G3DSA:3.30.1150.10 2 75 5.2E-10 T 14-10-2018 P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 Gene3D G3DSA:3.30.830.10 6 217 1.9E-66 T 14-10-2018 P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 SUPERFAMILY SSF63411 7 206 7.65E-57 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 Gene3D G3DSA:3.30.830.10 219 422 1.7E-53 T 14-10-2018 P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 SUPERFAMILY SSF63411 222 411 1.23E-43 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 Pfam PF05193 Peptidase M16 inactive domain 168 341 1.2E-36 T 14-10-2018 IPR007863 Peptidase M16, C-terminal P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 36 59 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 P029_00465 a6f86c60e810e3fc3219fd4d8b556a38 423 Pfam PF00675 Insulinase (Peptidase family M16) 16 161 2.0E-39 T 14-10-2018 IPR011765 Peptidase M16, N-terminal P029_00595 dcfe701e067b33c8c3709b17507151f1 381 Gene3D G3DSA:3.30.420.10 1 196 5.8E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_00595 dcfe701e067b33c8c3709b17507151f1 381 SUPERFAMILY SSF47819 297 360 1.9E-6 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 P029_00595 dcfe701e067b33c8c3709b17507151f1 381 Pfam PF01612 3'-5' exonuclease 7 173 1.7E-35 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P029_00595 dcfe701e067b33c8c3709b17507151f1 381 SMART SM00474 1 174 3.0E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P029_00595 dcfe701e067b33c8c3709b17507151f1 381 SUPERFAMILY SSF53098 2 194 3.49E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_05220 87869c484ddff9e1de2addad9bd8132d 423 SUPERFAMILY SSF56925 27 423 7.59E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05220 87869c484ddff9e1de2addad9bd8132d 423 Pfam PF01617 Surface antigen 27 423 9.7E-82 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05220 87869c484ddff9e1de2addad9bd8132d 423 Gene3D G3DSA:2.40.160.20 235 385 1.6E-9 T 14-10-2018 P029_02025 9e5c97ace3528b369c253563f6c306b0 159 Hamap MF_00984 Single-stranded DNA-binding protein. 6 119 30.595 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 P029_02025 9e5c97ace3528b369c253563f6c306b0 159 Pfam PF00436 Single-strand binding protein family 6 106 4.6E-33 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 P029_02025 9e5c97ace3528b369c253563f6c306b0 159 Gene3D G3DSA:2.40.50.140 2 121 2.5E-41 T 14-10-2018 P029_02025 9e5c97ace3528b369c253563f6c306b0 159 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 115 4.9E-39 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 P029_02025 9e5c97ace3528b369c253563f6c306b0 159 SUPERFAMILY SSF50249 5 159 6.17E-43 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01255 7511f68ff27bf1236f0a226ba813554c 177 Pfam PF00673 ribosomal L5P family C-terminus 82 175 5.3E-37 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01255 7511f68ff27bf1236f0a226ba813554c 177 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 177 36.888 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01255 7511f68ff27bf1236f0a226ba813554c 177 Pfam PF00281 Ribosomal protein L5 22 78 1.3E-23 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01255 7511f68ff27bf1236f0a226ba813554c 177 Gene3D G3DSA:3.30.1440.10 2 177 4.5E-68 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01255 7511f68ff27bf1236f0a226ba813554c 177 SUPERFAMILY SSF55282 7 176 1.77E-66 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01255 7511f68ff27bf1236f0a226ba813554c 177 PIRSF PIRSF002161 1 177 2.3E-58 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_03900 6abf423b4c5a48319a77a6026168e406 251 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 101 110 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 P029_03900 6abf423b4c5a48319a77a6026168e406 251 Gene3D G3DSA:3.40.640.10 1 150 2.3E-48 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_03900 6abf423b4c5a48319a77a6026168e406 251 Pfam PF00155 Aminotransferase class I and II 2 236 2.4E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P029_03900 6abf423b4c5a48319a77a6026168e406 251 Gene3D G3DSA:3.90.1150.10 151 242 6.9E-16 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_03900 6abf423b4c5a48319a77a6026168e406 251 SUPERFAMILY SSF53383 2 239 9.47E-56 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_03000 bebbb3e3b6239ceacbb547e5d584cd16 244 Pfam PF00929 Exonuclease 6 165 2.5E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P029_03000 bebbb3e3b6239ceacbb547e5d584cd16 244 Gene3D G3DSA:3.30.420.10 2 175 5.2E-52 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_03000 bebbb3e3b6239ceacbb547e5d584cd16 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 4 224 5.6E-81 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_03000 bebbb3e3b6239ceacbb547e5d584cd16 244 SMART SM00479 4 174 1.6E-52 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III P029_03000 bebbb3e3b6239ceacbb547e5d584cd16 244 SUPERFAMILY SSF53098 2 175 1.66E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_03000 bebbb3e3b6239ceacbb547e5d584cd16 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 2 197 7.0E-48 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 Pfam PF01245 Ribosomal protein L19 13 120 1.0E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 11 40 4.2E-31 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 95 120 4.2E-31 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 PRINTS PR00061 Ribosomal protein L19 signature 41 70 4.2E-31 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 Gene3D G3DSA:2.30.30.790 3 122 1.3E-12 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 SUPERFAMILY SSF50104 13 122 2.61E-38 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily P029_05365 9398c86b18002c746bf982c240ea8c4a 128 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 12 120 1.6E-38 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05365 9398c86b18002c746bf982c240ea8c4a 128 PIRSF PIRSF002191 1 128 4.9E-43 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 SUPERFAMILY SSF48024 15 125 4.05E-24 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 Gene3D G3DSA:3.40.50.300 173 471 1.5E-95 T 14-10-2018 P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 Gene3D G3DSA:1.10.860.10 11 172 2.7E-28 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 SUPERFAMILY SSF52540 193 464 9.66E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 Pfam PF00772 DnaB-like helicase N terminal domain 16 115 1.9E-20 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 Pfam PF03796 DnaB-like helicase C terminal domain 194 470 1.5E-96 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 P029_01395 8a95db39e62eb1779ab2c733d9e729bb 481 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 472 9.7E-140 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 Pfam PF01578 Cytochrome C assembly protein 83 289 5.5E-32 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 302 321 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 266 286 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 124 141 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 202 228 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 236 256 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 286 302 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 74 100 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 151 173 1.5E-64 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_05230 2d7099158013b8a3daa01ad5b600891b 636 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 307 620 1.5E-53 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal P029_01450 6324c76bfc3ea8d8d9f4c8da4364ced3 205 Pfam PF00691 OmpA family 51 144 5.1E-14 T 14-10-2018 IPR006665 OmpA-like domain P029_01450 6324c76bfc3ea8d8d9f4c8da4364ced3 205 Gene3D G3DSA:3.30.1330.60 34 159 1.1E-23 T 14-10-2018 IPR036737 OmpA-like domain superfamily P029_01450 6324c76bfc3ea8d8d9f4c8da4364ced3 205 PRINTS PR01021 OMPA domain signature 82 97 7.2E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P029_01450 6324c76bfc3ea8d8d9f4c8da4364ced3 205 PRINTS PR01021 OMPA domain signature 52 74 7.2E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P029_01450 6324c76bfc3ea8d8d9f4c8da4364ced3 205 PRINTS PR01021 OMPA domain signature 97 113 7.2E-12 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 P029_01450 6324c76bfc3ea8d8d9f4c8da4364ced3 205 SUPERFAMILY SSF103088 48 159 2.09E-22 T 14-10-2018 IPR036737 OmpA-like domain superfamily P029_00585 0c8caedbd4aef29308a54cbce4417a15 89 Pfam PF00313 'Cold-shock' DNA-binding domain 12 32 7.0E-6 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P029_00585 0c8caedbd4aef29308a54cbce4417a15 89 Pfam PF00313 'Cold-shock' DNA-binding domain 42 85 2.7E-10 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 P029_00585 0c8caedbd4aef29308a54cbce4417a15 89 SMART SM00357 12 87 5.9E-16 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 P029_00585 0c8caedbd4aef29308a54cbce4417a15 89 PIRSF PIRSF002599 7 89 4.4E-17 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 P029_00585 0c8caedbd4aef29308a54cbce4417a15 89 Gene3D G3DSA:2.40.50.140 9 86 4.7E-22 T 14-10-2018 P029_00585 0c8caedbd4aef29308a54cbce4417a15 89 SUPERFAMILY SSF50249 10 86 6.37E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_04730 7a111dd0b23b8f0c2c04ffbe2d400301 585 SUPERFAMILY SSF64182 69 465 5.36E-109 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily P029_04730 7a111dd0b23b8f0c2c04ffbe2d400301 585 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 40 582 5.2E-163 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 P029_04730 7a111dd0b23b8f0c2c04ffbe2d400301 585 Gene3D G3DSA:3.90.1640.30 70 342 7.7E-85 T 14-10-2018 P029_04730 7a111dd0b23b8f0c2c04ffbe2d400301 585 Gene3D G3DSA:3.10.310.30 343 466 7.4E-26 T 14-10-2018 P029_04730 7a111dd0b23b8f0c2c04ffbe2d400301 585 Pfam PF01368 DHH family 95 199 1.9E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 P029_04730 7a111dd0b23b8f0c2c04ffbe2d400301 585 Pfam PF02272 DHHA1 domain 340 460 6.4E-16 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 P029_03645 23350eeec79fbd142f22d9870b71dbac 172 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 6 170 6.3E-59 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 P029_03645 23350eeec79fbd142f22d9870b71dbac 172 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 172 23.888 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 P029_03645 23350eeec79fbd142f22d9870b71dbac 172 SUPERFAMILY SSF47240 6 139 2.52E-13 T 14-10-2018 IPR009078 Ferritin-like superfamily P029_05075 ef10ece07666b8044570e50f89f908eb 338 Pfam PF06144 DNA polymerase III, delta subunit 22 184 4.5E-10 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 P029_05075 ef10ece07666b8044570e50f89f908eb 338 SUPERFAMILY SSF48019 216 326 1.07E-6 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 P029_05075 ef10ece07666b8044570e50f89f908eb 338 SUPERFAMILY SSF52540 18 202 2.65E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05075 ef10ece07666b8044570e50f89f908eb 338 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 21 317 4.2E-28 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 P029_05075 ef10ece07666b8044570e50f89f908eb 338 Gene3D G3DSA:1.10.8.60 139 225 3.2E-5 T 14-10-2018 P029_05075 ef10ece07666b8044570e50f89f908eb 338 Gene3D G3DSA:3.40.50.300 17 131 1.6E-8 T 14-10-2018 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 Pfam PF02867 Ribonucleotide reductase, barrel domain 411 556 2.3E-33 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 SUPERFAMILY SSF48168 5 77 1.31E-16 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 Pfam PF02867 Ribonucleotide reductase, barrel domain 82 402 4.7E-76 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 Gene3D G3DSA:3.20.70.20 2 567 9.3E-172 T 14-10-2018 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 SUPERFAMILY SSF51998 80 561 2.84E-136 T 14-10-2018 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 13 78 1.6E-14 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 PRINTS PR01183 Ribonucleotide reductase large chain signature 374 397 2.1E-14 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 PRINTS PR01183 Ribonucleotide reductase large chain signature 155 174 2.1E-14 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01430 8cd9871d4bf045629095d1a9f2c1d13f 596 PRINTS PR01183 Ribonucleotide reductase large chain signature 346 368 2.1E-14 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 P029_01225 20e62822f9eba192ec195e8e42177826 211 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 206 5.1E-88 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 P029_01225 20e62822f9eba192ec195e8e42177826 211 SMART SM00322 59 124 5.9E-4 T 14-10-2018 IPR004087 K Homology domain GO:0003676 P029_01225 20e62822f9eba192ec195e8e42177826 211 Gene3D G3DSA:3.30.1140.32 107 206 3.0E-43 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01225 20e62822f9eba192ec195e8e42177826 211 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01225 20e62822f9eba192ec195e8e42177826 211 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.9E-38 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01225 20e62822f9eba192ec195e8e42177826 211 Pfam PF07650 KH domain 38 109 5.6E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01225 20e62822f9eba192ec195e8e42177826 211 Gene3D G3DSA:3.30.300.20 17 106 3.2E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta P029_01225 20e62822f9eba192ec195e8e42177826 211 SUPERFAMILY SSF54821 106 205 9.29E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01225 20e62822f9eba192ec195e8e42177826 211 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 36.757 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 P029_01225 20e62822f9eba192ec195e8e42177826 211 SUPERFAMILY SSF54814 2 105 5.23E-32 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P029_04700 7553aac4d63c9844341a869837177d4a 70 SUPERFAMILY SSF52833 14 69 2.63E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_04700 7553aac4d63c9844341a869837177d4a 70 PRINTS PR00160 Glutaredoxin signature 36 49 1.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup P029_04700 7553aac4d63c9844341a869837177d4a 70 PRINTS PR00160 Glutaredoxin signature 50 63 1.1E-8 T 14-10-2018 IPR014025 Glutaredoxin subgroup P029_04700 7553aac4d63c9844341a869837177d4a 70 Pfam PF00462 Glutaredoxin 15 53 5.3E-10 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 P029_04700 7553aac4d63c9844341a869837177d4a 70 Gene3D G3DSA:3.40.30.10 11 70 2.0E-17 T 14-10-2018 P029_04795 2ddba125d414c31646075936ff3737e4 590 SUPERFAMILY SSF52540 130 376 1.55E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04795 2ddba125d414c31646075936ff3737e4 590 ProSitePatterns PS00674 AAA-protein family signature. 276 294 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 P029_04795 2ddba125d414c31646075936ff3737e4 590 Pfam PF01434 Peptidase family M41 366 566 5.7E-72 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 P029_04795 2ddba125d414c31646075936ff3737e4 590 Gene3D G3DSA:3.40.50.300 124 305 3.1E-68 T 14-10-2018 P029_04795 2ddba125d414c31646075936ff3737e4 590 SMART SM00382 169 308 4.4E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_04795 2ddba125d414c31646075936ff3737e4 590 Gene3D G3DSA:1.10.8.60 307 381 4.8E-30 T 14-10-2018 P029_04795 2ddba125d414c31646075936ff3737e4 590 SUPERFAMILY SSF140990 387 572 4.05E-67 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 P029_04795 2ddba125d414c31646075936ff3737e4 590 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 88 567 1.1E-222 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 P029_04795 2ddba125d414c31646075936ff3737e4 590 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 174 304 6.3E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_04795 2ddba125d414c31646075936ff3737e4 590 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 581 35.849 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 P029_04795 2ddba125d414c31646075936ff3737e4 590 Gene3D G3DSA:1.20.58.760 382 577 3.0E-70 T 14-10-2018 P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 3 119 13.58 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 Pfam PF00825 Ribonuclease P 7 116 7.9E-21 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 Gene3D G3DSA:3.30.230.10 2 119 1.3E-20 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 74 4.0E-7 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 SUPERFAMILY SSF54211 3 118 9.61E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_01335 854d22a2dd362bbb4f7317a84cf1e7bb 120 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 8 108 9.5E-13 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 P029_01165 f708fdf4b0b741f77df8eb103adb4f9d 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 14 211 6.1E-42 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 P029_01165 f708fdf4b0b741f77df8eb103adb4f9d 228 Pfam PF02224 Cytidylate kinase 16 224 2.3E-42 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 P029_01165 f708fdf4b0b741f77df8eb103adb4f9d 228 Hamap MF_00238 Cytidylate kinase [cmk]. 14 228 24.496 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 P029_01165 f708fdf4b0b741f77df8eb103adb4f9d 228 Gene3D G3DSA:3.40.50.300 8 227 7.7E-48 T 14-10-2018 P029_01165 f708fdf4b0b741f77df8eb103adb4f9d 228 SUPERFAMILY SSF52540 14 227 9.96E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00775 943892422c4e3f359a307f69898db9f5 252 Gene3D G3DSA:3.40.50.1820 14 245 2.4E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_00775 943892422c4e3f359a307f69898db9f5 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 3.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00775 943892422c4e3f359a307f69898db9f5 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00775 943892422c4e3f359a307f69898db9f5 252 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 3.3E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00775 943892422c4e3f359a307f69898db9f5 252 SUPERFAMILY SSF53474 28 232 1.82E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_00775 943892422c4e3f359a307f69898db9f5 252 Pfam PF00561 alpha/beta hydrolase fold 27 143 3.4E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 Gene3D G3DSA:3.40.50.620 2 314 3.9E-117 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_01785 6b8a02498d180c90e2d5232486cc5385 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 466 27.711 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 SUPERFAMILY SSF52374 3 295 9.92E-98 T 14-10-2018 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 3.3E-145 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 SUPERFAMILY SSF48163 300 462 3.66E-29 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 304 3.9E-91 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.0E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 3.0E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.0E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.0E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 3.0E-26 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 P029_01785 6b8a02498d180c90e2d5232486cc5385 468 Gene3D G3DSA:1.10.10.350 367 468 1.5E-15 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 SUPERFAMILY SSF52402 19 259 7.94E-50 T 14-10-2018 P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 Gene3D G3DSA:2.40.30.10 289 374 2.3E-14 T 14-10-2018 P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 Pfam PF03054 tRNA methyl transferase 20 368 2.4E-110 T 14-10-2018 P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 19 369 36.99 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 Gene3D G3DSA:2.30.30.280 230 288 9.8E-17 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 Gene3D G3DSA:3.40.50.620 12 224 2.2E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_03635 bf6b62e9fa67075b7c5a3297093fc2c5 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 20 368 7.4E-101 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 P029_02365 36f1fc9f4fe8f2cc8320ac3ec425ea78 1601 SUPERFAMILY SSF51735 919 1258 4.39E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_02365 36f1fc9f4fe8f2cc8320ac3ec425ea78 1601 SUPERFAMILY SSF53223 733 930 2.3E-25 T 14-10-2018 P029_02365 36f1fc9f4fe8f2cc8320ac3ec425ea78 1601 PIRSF PIRSF036761 14 1597 0.0 T 14-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 P029_02365 36f1fc9f4fe8f2cc8320ac3ec425ea78 1601 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 92 1591 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 P029_03745 6725692685174a0daf640e7ff1f20551 634 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 327 1.8E-35 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 P029_03745 6725692685174a0daf640e7ff1f20551 634 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 121 1.5E-11 T 14-10-2018 P029_03745 6725692685174a0daf640e7ff1f20551 634 SMART SM00853 447 591 4.4E-36 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 P029_03745 6725692685174a0daf640e7ff1f20551 634 SUPERFAMILY SSF118116 443 633 1.16E-44 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily P029_03745 6725692685174a0daf640e7ff1f20551 634 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 308 2.3E-78 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 P029_03745 6725692685174a0daf640e7ff1f20551 634 SUPERFAMILY SSF55874 3 211 3.41E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_03745 6725692685174a0daf640e7ff1f20551 634 Gene3D G3DSA:2.30.42.20 449 633 9.4E-48 T 14-10-2018 P029_03745 6725692685174a0daf640e7ff1f20551 634 SUPERFAMILY SSF54211 215 327 7.21E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_03745 6725692685174a0daf640e7ff1f20551 634 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 92 98 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site P029_03745 6725692685174a0daf640e7ff1f20551 634 Gene3D G3DSA:3.30.230.10 215 327 1.1E-30 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_03745 6725692685174a0daf640e7ff1f20551 634 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 631 24.171 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 P029_03745 6725692685174a0daf640e7ff1f20551 634 Gene3D G3DSA:3.30.565.10 1 214 5.2E-60 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_03745 6725692685174a0daf640e7ff1f20551 634 Pfam PF08676 MutL C terminal dimerisation domain 443 589 1.1E-35 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 P029_03745 6725692685174a0daf640e7ff1f20551 634 Gene3D G3DSA:3.30.1370.100 489 588 9.4E-48 T 14-10-2018 P029_03745 6725692685174a0daf640e7ff1f20551 634 SMART SM01340 208 328 6.8E-47 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 Gene3D G3DSA:3.40.50.12160 4 134 2.3E-30 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 149 169 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 439 2.3E-146 T 14-10-2018 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 SUPERFAMILY SSF102114 134 371 4.71E-60 T 14-10-2018 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 Pfam PF04055 Radical SAM superfamily 149 322 1.3E-33 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 Gene3D G3DSA:3.80.30.20 144 377 2.0E-83 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 Pfam PF01938 TRAM domain 375 440 2.6E-4 T 14-10-2018 IPR002792 TRAM domain P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 69.902 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 SMART SM00729 145 361 4.0E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 437 7.4E-144 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 P029_03540 c45d1c267b38782f7a2f7f2d30bfc98e 444 Pfam PF00919 Uncharacterized protein family UPF0004 6 101 4.6E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 P029_04055 e03c6252c692e46163a342b0171be722 263 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 257 26.871 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 P029_04055 e03c6252c692e46163a342b0171be722 263 Gene3D G3DSA:3.30.420.40 95 261 1.5E-34 T 14-10-2018 P029_04055 e03c6252c692e46163a342b0171be722 263 Pfam PF03309 Type III pantothenate kinase 4 209 1.6E-48 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 P029_04055 e03c6252c692e46163a342b0171be722 263 Gene3D G3DSA:3.30.420.40 1 88 2.7E-20 T 14-10-2018 P029_04055 e03c6252c692e46163a342b0171be722 263 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 251 3.5E-43 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 P029_04055 e03c6252c692e46163a342b0171be722 263 SUPERFAMILY SSF53067 1 123 1.09E-22 T 14-10-2018 P029_04055 e03c6252c692e46163a342b0171be722 263 SUPERFAMILY SSF53067 126 254 3.08E-25 T 14-10-2018 P029_04260 453b372c772a82d881e7dddfb78da276 270 SUPERFAMILY SSF55931 1 262 7.36E-52 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 P029_04260 453b372c772a82d881e7dddfb78da276 270 SMART SM01230 1 225 6.2E-15 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_04260 453b372c772a82d881e7dddfb78da276 270 Gene3D G3DSA:3.30.590.10 1 265 2.6E-48 T 14-10-2018 P029_04260 453b372c772a82d881e7dddfb78da276 270 Pfam PF00120 Glutamine synthetase, catalytic domain 53 260 4.3E-40 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 SUPERFAMILY SSF54752 271 327 4.58E-16 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 7 326 4.1E-161 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 Gene3D G3DSA:3.30.250.10 271 342 7.7E-20 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 Gene3D G3DSA:3.40.50.300 29 270 1.2E-81 T 14-10-2018 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 SUPERFAMILY SSF52540 7 270 4.95E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 PRINTS PR00142 RecA protein signature 168 197 5.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 PRINTS PR00142 RecA protein signature 246 275 5.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 PRINTS PR00142 RecA protein signature 300 317 5.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 PRINTS PR00142 RecA protein signature 130 159 5.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 PRINTS PR00142 RecA protein signature 96 125 5.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 PRINTS PR00142 RecA protein signature 213 241 5.1E-83 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 Pfam PF00154 recA bacterial DNA recombination protein 10 271 3.7E-135 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 SMART SM00382 60 231 1.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 Hamap MF_00268 Protein RecA [recA]. 8 332 48.586 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05565 b6b4d776f6fe8d83fa0bfbf0d4b3bb30 354 ProSitePatterns PS00321 recA signature. 216 224 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 P029_04655 e0fbb3d780345b36a6061f76fde3f73e 184 Gene3D G3DSA:2.60.370.10 52 184 1.4E-49 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04655 e0fbb3d780345b36a6061f76fde3f73e 184 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 179 34.859 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04655 e0fbb3d780345b36a6061f76fde3f73e 184 SUPERFAMILY SSF110111 58 176 8.76E-45 T 14-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04655 e0fbb3d780345b36a6061f76fde3f73e 184 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 28 173 1.8E-53 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04655 e0fbb3d780345b36a6061f76fde3f73e 184 PIRSF PIRSF005413 1 184 8.4E-68 T 14-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:3.50.7.10 171 380 1.4E-189 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:3.30.260.10 137 411 1.4E-189 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 26 52 2.2E-65 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 351 376 2.2E-65 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 82 109 2.2E-65 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 267 290 2.2E-65 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 PRINTS PR00298 60kDa chaperonin signature 399 420 2.2E-65 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 Gene3D G3DSA:1.10.560.10 13 524 1.4E-189 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 527 1.0E-92 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF48592 13 524 4.25E-50 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 ProSitePatterns PS00296 Chaperonins cpn60 signature. 406 417 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 Hamap MF_00600 60 kDa chaperonin [groL]. 1 547 35.07 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF52029 185 377 7.33E-75 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 TIGRFAM TIGR02348 GroEL: chaperonin GroL 13 529 2.8E-188 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 P029_01025 3e2bba3ccc8a357d76745736d665a3fb 550 SUPERFAMILY SSF54849 139 203 6.87E-20 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily P029_03590 31a7b4ad751084da32ad02204293086a 209 SMART SM00478 36 183 2.8E-52 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 SMART SM00525 184 204 2.7E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 Pfam PF00633 Helix-hairpin-helix motif 97 125 3.5E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 Gene3D G3DSA:1.10.1670.10 12 201 1.3E-70 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 166 1.6E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 185 201 3.3E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 TIGRFAM TIGR01083 nth: endonuclease III 2 192 7.4E-76 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 P029_03590 31a7b4ad751084da32ad02204293086a 209 PIRSF PIRSF001435 1 206 5.4E-45 T 14-10-2018 P029_03590 31a7b4ad751084da32ad02204293086a 209 SUPERFAMILY SSF48150 5 203 2.83E-65 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 P029_03590 31a7b4ad751084da32ad02204293086a 209 Hamap MF_00942 Endonuclease III [nth]. 1 207 34.792 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 P029_03590 31a7b4ad751084da32ad02204293086a 209 Gene3D G3DSA:1.10.340.30 19 130 1.3E-70 T 14-10-2018 P029_04980 5dbe6d21133fa85016f10692f51f811a 305 SUPERFAMILY SSF56925 105 266 2.62E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04980 5dbe6d21133fa85016f10692f51f811a 305 Pfam PF01617 Surface antigen 39 304 2.9E-34 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 451 4.8E-49 T 14-10-2018 IPR000160 GGDEF domain P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 Gene3D G3DSA:3.40.50.12740 1 292 2.2E-78 T 14-10-2018 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 SUPERFAMILY SSF52172 3 133 1.38E-37 T 14-10-2018 IPR011006 CheY-like superfamily P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 Pfam PF00072 Response regulator receiver domain 5 117 1.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 Pfam PF00072 Response regulator receiver domain 159 272 2.1E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 SUPERFAMILY SSF55073 300 451 1.33E-46 T 14-10-2018 IPR029787 Nucleotide cyclase P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 Gene3D G3DSA:3.30.70.270 293 455 4.0E-53 T 14-10-2018 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 SMART SM00448 3 117 5.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 SMART SM00448 157 271 0.0026 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 SUPERFAMILY SSF52172 148 289 1.42E-14 T 14-10-2018 IPR011006 CheY-like superfamily P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 Pfam PF00990 Diguanylate cyclase, GGDEF domain 296 448 8.3E-45 T 14-10-2018 IPR000160 GGDEF domain P029_02355 5fa76d0daf44e95173272b59e0f24c45 456 SMART SM00267 284 454 2.4E-55 T 14-10-2018 IPR000160 GGDEF domain P029_04915 0942f83a0d06497b347244da7136b4d8 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 447 9.7E-102 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 Gene3D G3DSA:3.40.140.20 207 362 7.6E-51 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 Gene3D G3DSA:3.40.50.1380 3 195 3.2E-71 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P029_04915 0942f83a0d06497b347244da7136b4d8 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 512 6.1E-166 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 6 512 38.487 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 Gene3D G3DSA:3.40.140.20 380 512 4.2E-51 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 SUPERFAMILY SSF52335 6 194 2.75E-57 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily P029_04915 0942f83a0d06497b347244da7136b4d8 512 SUPERFAMILY SSF53927 212 512 7.02E-111 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P029_04915 0942f83a0d06497b347244da7136b4d8 512 PIRSF PIRSF000414 1 512 1.6E-192 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 SMART SM00798 136 448 5.1E-148 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_04915 0942f83a0d06497b347244da7136b4d8 512 Pfam PF02142 MGS-like domain 18 130 9.2E-20 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain P029_04915 0942f83a0d06497b347244da7136b4d8 512 SMART SM00851 18 131 4.2E-43 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Pfam PF03853 YjeF-related protein N-terminus 97 164 2.2E-21 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Pfam PF03853 YjeF-related protein N-terminus 22 79 8.0E-11 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 2 186 21.674 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 207 456 1.0E-47 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 SUPERFAMILY SSF64153 4 217 3.4E-48 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Gene3D G3DSA:3.40.50.10260 5 190 1.6E-48 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 196 457 15.105 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 SUPERFAMILY SSF53613 195 456 5.21E-51 T 14-10-2018 IPR029056 Ribokinase-like P029_02515 0275be9f91a34ba5246ccbf023285e84 459 PIRSF PIRSF017184 90 459 6.7E-80 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 PIRSF PIRSF017184 10 84 5.6E-12 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Pfam PF01256 Carbohydrate kinase 229 439 8.2E-45 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 P029_02515 0275be9f91a34ba5246ccbf023285e84 459 Gene3D G3DSA:3.40.1190.20 199 458 1.5E-57 T 14-10-2018 IPR029056 Ribokinase-like P029_00030 a99c50fdaae87bc7163bc2df166a9d52 221 SUPERFAMILY SSF52317 1 214 5.57E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_00030 a99c50fdaae87bc7163bc2df166a9d52 221 Gene3D G3DSA:3.40.50.880 1 221 2.6E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_00030 a99c50fdaae87bc7163bc2df166a9d52 221 Pfam PF01965 DJ-1/PfpI family 14 153 3.6E-7 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 P029_03630 f2b5fa105fc198e93ffebaeb05db2eab 340 Gene3D G3DSA:3.40.50.300 103 332 2.4E-10 T 14-10-2018 P029_03630 f2b5fa105fc198e93ffebaeb05db2eab 340 Gene3D G3DSA:3.30.450.90 6 101 7.0E-8 T 14-10-2018 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 2 294 32.232 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 3 209 3.9E-68 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 228 244 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 PIRSF PIRSF001438 1 299 2.4E-101 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 Gene3D G3DSA:3.30.160.40 219 297 3.9E-11 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 Gene3D G3DSA:3.40.190.10 3 207 1.7E-72 T 14-10-2018 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 3 287 7.8E-111 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 SUPERFAMILY SSF54782 217 296 1.7E-15 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 PRINTS PR00151 Porphobilinogen deaminase signature 121 138 2.2E-36 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 PRINTS PR00151 Porphobilinogen deaminase signature 140 157 2.2E-36 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 2.2E-36 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 2.2E-36 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 PRINTS PR00151 Porphobilinogen deaminase signature 227 244 2.2E-36 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 Gene3D G3DSA:3.40.190.10 100 199 1.7E-72 T 14-10-2018 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 SUPERFAMILY SSF53850 2 215 3.8E-71 T 14-10-2018 P029_03065 d3f10318bd056c4d4d10b0137938cc97 300 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 223 292 2.6E-11 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_01370 c22a3d25ff3881c2ecdf4aece1c201f4 320 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 231 319 8.0E-33 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 P029_01370 c22a3d25ff3881c2ecdf4aece1c201f4 320 Gene3D G3DSA:3.40.47.10 2 320 6.8E-119 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 P029_01370 c22a3d25ff3881c2ecdf4aece1c201f4 320 SUPERFAMILY SSF53901 7 319 1.6E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 P029_01370 c22a3d25ff3881c2ecdf4aece1c201f4 320 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 2 319 2.0E-117 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 P029_01370 c22a3d25ff3881c2ecdf4aece1c201f4 320 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 187 1.4E-29 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 P029_01370 c22a3d25ff3881c2ecdf4aece1c201f4 320 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 320 65.764 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Pfam PF05697 Bacterial trigger factor protein (TF) 12 154 3.8E-28 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 172 244 4.1E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Hamap MF_00303 Trigger factor [tig]. 5 423 15.697 T 14-10-2018 IPR005215 Trigger factor GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 295 417 9.5E-14 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Gene3D G3DSA:1.10.3120.10 127 421 4.7E-55 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 SUPERFAMILY SSF102735 8 140 1.96E-24 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 SUPERFAMILY SSF109998 266 434 1.47E-26 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily P029_03860 d3f7bc17ed4006c468703f19ac894160 439 TIGRFAM TIGR00115 tig: trigger factor 15 417 1.1E-101 T 14-10-2018 IPR005215 Trigger factor GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 SUPERFAMILY SSF54534 143 253 2.16E-21 T 14-10-2018 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Gene3D G3DSA:3.10.50.40 161 260 4.7E-55 T 14-10-2018 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 Gene3D G3DSA:3.30.70.1050 4 126 2.6E-21 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 P029_03860 d3f7bc17ed4006c468703f19ac894160 439 PIRSF PIRSF003095 5 437 6.5E-75 T 14-10-2018 IPR005215 Trigger factor GO:0015031 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 Pfam PF00890 FAD binding domain 14 412 6.2E-122 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 Gene3D G3DSA:1.20.58.100 440 551 3.1E-37 T 14-10-2018 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 14 601 8.3E-245 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 48 57 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 Gene3D G3DSA:4.10.80.40 552 601 6.4E-11 T 14-10-2018 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 SUPERFAMILY SSF46977 458 601 1.7E-48 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 SUPERFAMILY SSF56425 243 361 5.68E-43 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 Gene3D G3DSA:3.90.700.10 253 356 3.8E-168 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 Pfam PF02910 Fumarate reductase flavoprotein C-term 467 601 7.8E-44 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 11 601 6.7E-291 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 SUPERFAMILY SSF51905 5 435 4.69E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 PIRSF PIRSF000171 4 591 1.0E-39 T 14-10-2018 P029_00680 8e102ec61ab2f703db7547081d8cbea7 601 Gene3D G3DSA:3.50.50.60 14 423 3.8E-168 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_02620 7891a13c4395ac0fe53796bb50d9e52b 116 Pfam PF02152 Dihydroneopterin aldolase 6 108 1.0E-16 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P029_02620 7891a13c4395ac0fe53796bb50d9e52b 116 TIGRFAM TIGR00526 folB_dom: FolB domain 4 114 3.9E-16 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P029_02620 7891a13c4395ac0fe53796bb50d9e52b 116 SUPERFAMILY SSF55620 5 113 2.0E-19 T 14-10-2018 P029_02620 7891a13c4395ac0fe53796bb50d9e52b 116 Gene3D G3DSA:3.30.1130.10 2 111 1.0E-16 T 14-10-2018 P029_02620 7891a13c4395ac0fe53796bb50d9e52b 116 SMART SM00905 5 110 6.0E-19 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 P029_01560 9581475946b74922ea64f123879435eb 324 Gene3D G3DSA:3.10.290.10 4 70 9.1E-9 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P029_01560 9581475946b74922ea64f123879435eb 324 Pfam PF00849 RNA pseudouridylate synthase 91 248 2.0E-27 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_01560 9581475946b74922ea64f123879435eb 324 Gene3D G3DSA:3.30.2350.10 73 304 7.7E-66 T 14-10-2018 P029_01560 9581475946b74922ea64f123879435eb 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 315 1.4E-78 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_01560 9581475946b74922ea64f123879435eb 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 138 152 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_01560 9581475946b74922ea64f123879435eb 324 SUPERFAMILY SSF55120 79 316 4.93E-67 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_01560 9581475946b74922ea64f123879435eb 324 SUPERFAMILY SSF55174 16 67 1.85E-5 T 14-10-2018 P029_00405 b56f150f3959f6833edc090ec96ee831 106 Gene3D G3DSA:3.20.20.70 1 105 5.7E-28 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_00405 b56f150f3959f6833edc090ec96ee831 106 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 94 1.5E-27 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 P029_00405 b56f150f3959f6833edc090ec96ee831 106 SUPERFAMILY SSF51412 7 94 3.14E-23 T 14-10-2018 P029_00405 b56f150f3959f6833edc090ec96ee831 106 SMART SM01240 2 106 5.5E-5 T 14-10-2018 P029_00425 d125b78fecb374c314c4a4f05d154d09 73 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 72 1.3E-10 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_00425 d125b78fecb374c314c4a4f05d154d09 73 Gene3D G3DSA:2.30.170.50 1 73 3.4E-8 T 14-10-2018 P029_00425 d125b78fecb374c314c4a4f05d154d09 73 SUPERFAMILY SSF143800 1 72 1.92E-11 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00425 d125b78fecb374c314c4a4f05d154d09 73 Pfam PF01197 Ribosomal protein L31 1 71 1.2E-13 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_02520 a2c554d921e8876c533569a5c7b46154 166 Pfam PF13667 ThiC-associated domain 7 75 3.4E-19 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 532 550 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:3.40.50.300 454 667 5.3E-73 T 14-10-2018 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.8.60 365 451 1.3E-27 T 14-10-2018 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF52540 455 742 9.92E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 505 523 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 623 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 547 565 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 576 594 2.5E-33 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.1780.10 1 140 4.2E-25 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF52540 183 427 3.25E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM00382 501 637 1.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM00382 220 366 1.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 339 2.2E-10 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SUPERFAMILY SSF81923 2 140 1.07E-39 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 669 749 4.1E-14 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:1.10.8.60 669 771 1.0E-17 T 14-10-2018 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Gene3D G3DSA:3.40.50.300 170 364 4.1E-58 T 14-10-2018 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 Pfam PF07724 AAA domain (Cdc48 subfamily) 501 663 6.0E-42 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_01960 ba9a40133c0a4b04bb68f3c8e0956ab7 773 SMART SM01086 669 760 2.2E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 SUPERFAMILY SSF75217 83 235 4.8E-40 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 10 235 1.3E-42 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 Pfam PF04452 RNA methyltransferase 27 234 9.3E-53 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 PIRSF PIRSF015601 9 239 7.4E-59 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 Gene3D G3DSA:3.40.1280.10 81 237 7.3E-42 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 Gene3D G3DSA:2.40.240.20 8 76 3.3E-17 T 14-10-2018 P029_03240 90a8981ff91e9b62bf7cecac32301d7d 239 SUPERFAMILY SSF88697 10 75 1.39E-14 T 14-10-2018 IPR015947 PUA-like superfamily P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 SUPERFAMILY SSF52172 1 176 5.45E-31 T 14-10-2018 IPR011006 CheY-like superfamily P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 SMART SM00448 1 115 3.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 Gene3D G3DSA:3.40.50.2300 1 121 8.0E-32 T 14-10-2018 P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 SMART SM00862 148 225 6.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 Gene3D G3DSA:1.10.10.10 122 232 1.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 P029_04405 135a447a8f4fbde6119a4be09bcd4803 276 Pfam PF00072 Response regulator receiver domain 3 116 4.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 P029_01585 d5dcc13b31e558a71d734913c590522f 295 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 281 3.3E-116 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P029_01585 d5dcc13b31e558a71d734913c590522f 295 SUPERFAMILY SSF102114 14 282 4.97E-65 T 14-10-2018 P029_01585 d5dcc13b31e558a71d734913c590522f 295 SMART SM00729 50 258 3.2E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 P029_01585 d5dcc13b31e558a71d734913c590522f 295 Hamap MF_00206 Lipoyl synthase [lipA]. 1 288 151.28 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P029_01585 d5dcc13b31e558a71d734913c590522f 295 PIRSF PIRSF005963 1 294 1.4E-136 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 P029_01585 d5dcc13b31e558a71d734913c590522f 295 Pfam PF04055 Radical SAM superfamily 55 216 7.5E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 P029_01585 d5dcc13b31e558a71d734913c590522f 295 Gene3D G3DSA:3.20.20.70 47 255 4.9E-17 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 Gene3D G3DSA:4.10.640.10 22 96 1.6E-23 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 46 95 5.0E-19 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 85 95 5.5E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 53 63 5.5E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 71 85 5.5E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 PRINTS PR00974 Ribosomal protein S18 family signature 63 70 5.5E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 TIGRFAM TIGR00165 S18: ribosomal protein bS18 29 95 1.2E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 Pfam PF01084 Ribosomal protein S18 44 93 4.4E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 SUPERFAMILY SSF46911 25 96 1.23E-23 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00650 e5d83f6bddce50ac80bef72ef669f75a 96 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 27 96 17.158 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 SUPERFAMILY SSF81799 111 214 5.75E-30 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 291 1.9E-88 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 PIRSF PIRSF004486 1 295 5.2E-104 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 Gene3D G3DSA:1.10.150.170 109 215 3.8E-100 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 294 35.202 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 Pfam PF01795 MraW methylase family 3 292 1.6E-91 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 Gene3D G3DSA:3.40.50.150 4 290 3.8E-100 T 14-10-2018 P029_02850 ad54f3374f140b2e9873da80b58a05c4 295 SUPERFAMILY SSF53335 4 293 4.95E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 SUPERFAMILY SSF88946 9 119 1.02E-34 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 Gene3D G3DSA:1.10.10.10 211 284 1.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 99 107 9.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 75 88 9.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 231 243 9.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 250 265 9.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 PRINTS PR00046 Major sigma-70 factor signature 265 276 9.9E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 278 3.6E-29 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 Pfam PF04542 Sigma-70 region 2 51 119 2.3E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 Pfam PF04545 Sigma-70, region 4 227 277 2.0E-12 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 SUPERFAMILY SSF88659 191 285 3.27E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like P029_03115 337e9fa2aa6db91dc79f38d8c7028133 289 Gene3D G3DSA:1.20.120.1810 15 118 5.9E-29 T 14-10-2018 P029_03210 4361d629ba091ea12b95feed5106f36e 91 SMART SM00411 1 90 9.6E-5 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P029_03210 4361d629ba091ea12b95feed5106f36e 91 Gene3D G3DSA:4.10.520.10 1 91 1.3E-15 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P029_03210 4361d629ba091ea12b95feed5106f36e 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.9E-19 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P029_03210 4361d629ba091ea12b95feed5106f36e 91 SUPERFAMILY SSF47729 1 90 2.06E-18 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P029_04355 13760d6a54262c09f81056a73d9832e9 233 SUPERFAMILY SSF48452 33 221 8.63E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_04355 13760d6a54262c09f81056a73d9832e9 233 Pfam PF13525 Outer membrane lipoprotein 34 222 3.4E-41 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like P029_04355 13760d6a54262c09f81056a73d9832e9 233 Gene3D G3DSA:1.25.40.10 33 231 2.1E-45 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_04355 13760d6a54262c09f81056a73d9832e9 233 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 228 8.7E-58 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD P029_04355 13760d6a54262c09f81056a73d9832e9 233 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 2 232 24.975 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD P029_04690 3011d239a4af1856d2dd936f3c00450e 225 Pfam PF02104 SURF1 family 15 200 8.9E-28 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_03715 efc0f5d37a3545ce806c3377201678b8 56 Pfam PF00471 Ribosomal protein L33 10 54 4.0E-12 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_03715 efc0f5d37a3545ce806c3377201678b8 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 55 7.0E-20 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_03715 efc0f5d37a3545ce806c3377201678b8 56 Gene3D G3DSA:2.20.28.120 1 56 1.3E-23 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_03715 efc0f5d37a3545ce806c3377201678b8 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 54 12.35 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_03715 efc0f5d37a3545ce806c3377201678b8 56 SUPERFAMILY SSF57829 3 54 2.2E-15 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 P029_03730 b91dc99c250995ccc0d09a53e99f2d95 75 Pfam PF00550 Phosphopantetheine attachment site 13 68 1.5E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain P029_03730 b91dc99c250995ccc0d09a53e99f2d95 75 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 31 68 9.0E-12 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 P029_03730 b91dc99c250995ccc0d09a53e99f2d95 75 Gene3D G3DSA:1.10.1200.10 1 75 6.6E-25 T 14-10-2018 IPR036736 ACP-like superfamily P029_03730 b91dc99c250995ccc0d09a53e99f2d95 75 ProSitePatterns PS00012 Phosphopantetheine attachment site. 27 42 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site P029_03730 b91dc99c250995ccc0d09a53e99f2d95 75 SUPERFAMILY SSF47336 18 72 4.84E-14 T 14-10-2018 IPR036736 ACP-like superfamily P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 SMART SM00387 30 175 2.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 SUPERFAMILY SSF54211 227 398 6.07E-51 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 1 793 87.47 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 SUPERFAMILY SSF56719 405 784 2.88E-77 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Gene3D G3DSA:3.40.50.670 405 614 6.4E-69 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Gene3D G3DSA:3.30.230.10 225 404 7.2E-63 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 SUPERFAMILY SSF55874 4 210 3.97E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Gene3D G3DSA:3.40.50.670 708 792 1.8E-22 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Pfam PF01751 Toprim domain 426 537 7.4E-17 T 14-10-2018 IPR006171 TOPRIM domain P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Gene3D G3DSA:3.30.565.10 1 217 1.2E-85 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 367 381 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 226 248 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 762 778 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 477 486 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 195 208 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 249 267 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 4 14 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 319 335 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 180 195 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 381 401 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR01159 DNA gyrase subunit B signature 746 758 4.1E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 275 288 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 494 510 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 512 529 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 725 741 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 427 441 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 69 82 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 112 126 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 34 49 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 PRINTS PR00418 DNA topoisomerase II family signature 532 544 7.1E-69 T 14-10-2018 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 SMART SM00433 34 786 2.9E-228 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Pfam PF00204 DNA gyrase B 227 397 2.1E-52 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 31 170 1.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 4 792 6.0E-277 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P029_02955 85f2b937f1aa231b76590a72fd42b1fe 793 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 721 782 2.2E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 P029_05155 5c3081a11540cb42a09a6396ddae72fc 571 Gene3D G3DSA:3.40.50.720 404 565 4.3E-29 T 14-10-2018 P029_05155 5c3081a11540cb42a09a6396ddae72fc 571 Pfam PF00999 Sodium/hydrogen exchanger family 11 374 1.0E-57 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 P029_05155 5c3081a11540cb42a09a6396ddae72fc 571 Pfam PF02254 TrkA-N domain 408 521 8.0E-20 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 P029_05155 5c3081a11540cb42a09a6396ddae72fc 571 SUPERFAMILY SSF51735 406 536 1.32E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_05155 5c3081a11540cb42a09a6396ddae72fc 571 Gene3D G3DSA:1.20.1530.20 3 382 6.4E-81 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily P029_04230 cea5918c120c293b7610cc2dae061860 91 Pfam PF01165 Ribosomal protein S21 3 54 1.2E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04230 cea5918c120c293b7610cc2dae061860 91 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 56 2.4E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04230 cea5918c120c293b7610cc2dae061860 91 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 12.33 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05285 999c49a2d453c13a511a75af7f522fc3 165 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 11 164 30.939 T 14-10-2018 IPR033747 Class I PurE P029_05285 999c49a2d453c13a511a75af7f522fc3 165 PIRSF PIRSF001338 7 163 1.0E-64 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 P029_05285 999c49a2d453c13a511a75af7f522fc3 165 Gene3D G3DSA:3.40.50.7700 2 164 1.8E-66 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 P029_05285 999c49a2d453c13a511a75af7f522fc3 165 SMART SM01001 9 160 6.6E-92 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 P029_05285 999c49a2d453c13a511a75af7f522fc3 165 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 11 160 1.8E-59 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 P029_05285 999c49a2d453c13a511a75af7f522fc3 165 SUPERFAMILY SSF52255 8 160 1.06E-61 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 P029_05285 999c49a2d453c13a511a75af7f522fc3 165 Pfam PF00731 AIR carboxylase 11 157 1.2E-60 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 P029_04755 f2f3a555e83a85b2e40e8e8171fb2739 443 Pfam PF00675 Insulinase (Peptidase family M16) 61 179 6.3E-5 T 14-10-2018 IPR011765 Peptidase M16, N-terminal P029_04755 f2f3a555e83a85b2e40e8e8171fb2739 443 SUPERFAMILY SSF63411 259 439 8.17E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P029_04755 f2f3a555e83a85b2e40e8e8171fb2739 443 SUPERFAMILY SSF63411 30 233 4.67E-35 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 P029_04755 f2f3a555e83a85b2e40e8e8171fb2739 443 Pfam PF05193 Peptidase M16 inactive domain 195 370 3.2E-18 T 14-10-2018 IPR007863 Peptidase M16, C-terminal P029_04755 f2f3a555e83a85b2e40e8e8171fb2739 443 Gene3D G3DSA:3.30.830.10 34 242 3.8E-32 T 14-10-2018 P029_04755 f2f3a555e83a85b2e40e8e8171fb2739 443 Gene3D G3DSA:3.30.830.10 255 440 1.3E-32 T 14-10-2018 P029_05790 6d31a0361cff5d04e01c6a8b1a84d983 433 Pfam PF03743 Bacterial conjugation TrbI-like protein 229 427 6.1E-47 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI P029_05790 6d31a0361cff5d04e01c6a8b1a84d983 433 Gene3D G3DSA:2.40.128.260 231 425 7.0E-39 T 14-10-2018 P029_05790 6d31a0361cff5d04e01c6a8b1a84d983 433 Gene3D G3DSA:1.10.1200.160 375 406 7.0E-39 T 14-10-2018 P029_00235 f7c402a2e40b5a196abfee2bbc086f1c 344 PIRSF PIRSF002825 2 344 3.4E-83 T 14-10-2018 IPR026045 Ferric binding protein P029_00235 f7c402a2e40b5a196abfee2bbc086f1c 344 Pfam PF13343 Bacterial extracellular solute-binding protein 80 306 4.2E-22 T 14-10-2018 P029_00235 f7c402a2e40b5a196abfee2bbc086f1c 344 Gene3D G3DSA:3.40.190.10 32 307 1.4E-118 T 14-10-2018 P029_00235 f7c402a2e40b5a196abfee2bbc086f1c 344 SUPERFAMILY SSF53850 27 331 5.65E-74 T 14-10-2018 P029_00235 f7c402a2e40b5a196abfee2bbc086f1c 344 Gene3D G3DSA:3.40.190.10 130 342 1.4E-118 T 14-10-2018 P029_05470 0d3768702f1cd5945dee77587ff7668f 149 Pfam PF01668 SmpB protein 4 147 8.8E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 P029_05470 0d3768702f1cd5945dee77587ff7668f 149 ProSitePatterns PS01317 SsrA-binding protein. 22 34 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site P029_05470 0d3768702f1cd5945dee77587ff7668f 149 Hamap MF_00023 SsrA-binding protein [smpB]. 1 149 62.577 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 P029_05470 0d3768702f1cd5945dee77587ff7668f 149 Gene3D G3DSA:2.40.280.10 1 125 9.7E-44 T 14-10-2018 IPR023620 Small protein B P029_05470 0d3768702f1cd5945dee77587ff7668f 149 SUPERFAMILY SSF74982 2 128 2.09E-44 T 14-10-2018 IPR023620 Small protein B P029_05470 0d3768702f1cd5945dee77587ff7668f 149 TIGRFAM TIGR00086 smpB: SsrA-binding protein 4 146 7.7E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 P029_05470 0d3768702f1cd5945dee77587ff7668f 149 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 128 1.0E-44 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 332 6.9E-99 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 89 1.0E-16 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 SUPERFAMILY SSF46589 15 101 2.35E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 Gene3D G3DSA:3.30.930.10 9 335 5.0E-109 T 14-10-2018 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 334 42.442 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 Pfam PF01409 tRNA synthetases class II core domain (F) 94 333 2.7E-97 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 P029_00265 a105bf629d40317dcf84e696b1a46b12 342 SUPERFAMILY SSF55681 94 335 1.07E-73 T 14-10-2018 P029_02255 9393e3d6765289611bd44743dbc888fa 270 Gene3D G3DSA:3.20.20.140 1 259 1.8E-78 T 14-10-2018 P029_02255 9393e3d6765289611bd44743dbc888fa 270 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 P029_02255 9393e3d6765289611bd44743dbc888fa 270 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 9.3E-80 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 P029_02255 9393e3d6765289611bd44743dbc888fa 270 PIRSF PIRSF005902 1 256 1.4E-71 T 14-10-2018 IPR001130 TatD family GO:0016788 P029_02255 9393e3d6765289611bd44743dbc888fa 270 Pfam PF01026 TatD related DNase 3 252 2.9E-69 T 14-10-2018 IPR001130 TatD family GO:0016788 P029_02255 9393e3d6765289611bd44743dbc888fa 270 SUPERFAMILY SSF51556 2 253 3.28E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase P029_05430 f8582e643b97375f5791493d5e08234f 370 Pfam PF02601 Exonuclease VII, large subunit 100 296 5.2E-70 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 P029_05430 f8582e643b97375f5791493d5e08234f 370 Pfam PF02601 Exonuclease VII, large subunit 294 365 1.3E-9 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 P029_05430 f8582e643b97375f5791493d5e08234f 370 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 370 21.533 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 P029_05430 f8582e643b97375f5791493d5e08234f 370 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 4 368 1.8E-119 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 P029_05430 f8582e643b97375f5791493d5e08234f 370 Pfam PF13742 OB-fold nucleic acid binding domain 4 76 8.5E-19 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 P029_04410 7420cb883b847b81184b9a2758122901 212 SUPERFAMILY SSF47413 10 75 1.6E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P029_04410 7420cb883b847b81184b9a2758122901 212 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 14 76 2.2E-9 T 14-10-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 P029_04410 7420cb883b847b81184b9a2758122901 212 Gene3D G3DSA:2.10.109.10 99 211 7.7E-8 T 14-10-2018 P029_04410 7420cb883b847b81184b9a2758122901 212 Gene3D G3DSA:1.10.260.40 7 75 1.0E-10 T 14-10-2018 P029_04410 7420cb883b847b81184b9a2758122901 212 SUPERFAMILY SSF51306 118 210 2.88E-13 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily P029_04410 7420cb883b847b81184b9a2758122901 212 SMART SM00530 14 70 1.5E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 SUPERFAMILY SSF50104 125 179 1.28E-12 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily P029_04145 0e7fa52c6d577ca521c4463da0041489 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 179 4.9E-46 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 PRINTS PR00338 Transcription termination factor NUSG signature 137 152 3.8E-8 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 3.8E-8 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 PRINTS PR00338 Transcription termination factor NUSG signature 155 171 3.8E-8 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 179 20.285 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 SUPERFAMILY SSF82679 3 112 7.19E-28 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 Gene3D G3DSA:3.30.70.940 2 116 1.2E-27 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 Gene3D G3DSA:2.30.30.30 124 179 7.0E-16 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 Pfam PF02357 Transcription termination factor nusG 4 107 8.2E-17 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P029_04145 0e7fa52c6d577ca521c4463da0041489 181 SMART SM00738 2 111 4.8E-24 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 Gene3D G3DSA:3.90.78.10 215 301 3.8E-23 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 SUPERFAMILY SSF56194 194 297 1.31E-24 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 Pfam PF01565 FAD binding domain 39 162 4.6E-15 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 295 4.0E-20 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 Gene3D G3DSA:3.30.465.10 87 212 8.6E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 67.375 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 28 297 2.6E-45 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 Gene3D G3DSA:3.30.43.10 8 84 2.8E-13 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 P029_03060 34cba4d429af8808da2ae1f47f428ba1 302 SUPERFAMILY SSF56176 23 203 1.59E-35 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 Pfam PF00162 Phosphoglycerate kinase 11 382 5.0E-124 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 383 30.416 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 35 57 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 14 30 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 310 335 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 191 210 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 347 358 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PRINTS PR00477 Phosphoglycerate kinase family signature 371 384 2.4E-56 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 SUPERFAMILY SSF53748 9 382 2.59E-116 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 Gene3D G3DSA:3.40.50.1260 13 171 7.7E-126 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 PIRSF PIRSF000724 3 384 1.1E-121 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 19 29 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05425 37e6ddce9925bb9ba166010cf79cbce6 384 Gene3D G3DSA:3.40.50.1260 172 383 7.7E-126 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 SMART SM01004 3 324 9.9E-191 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 Gene3D G3DSA:3.20.20.70 2 328 1.5E-124 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PIRSF PIRSF001415 1 327 2.4E-126 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 3.2E-45 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 3.2E-45 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 298 317 3.2E-45 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 243 259 3.2E-45 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 3.2E-45 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 283 3.2E-45 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 243 255 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 SUPERFAMILY SSF51569 2 325 1.47E-121 T 14-10-2018 P029_03460 3717a8ba9f5c56602aa93cdcb7620d3e 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 322 2.3E-122 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 P029_03200 16f1d5be7d14d0c33e22850edf56236a 200 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 2 182 1.2E-46 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 P029_03200 16f1d5be7d14d0c33e22850edf56236a 200 SUPERFAMILY SSF55821 2 184 9.46E-47 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily P029_03200 16f1d5be7d14d0c33e22850edf56236a 200 Pfam PF01300 Telomere recombination 8 180 4.7E-44 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 P029_03200 16f1d5be7d14d0c33e22850edf56236a 200 Gene3D G3DSA:3.90.870.10 1 193 5.9E-48 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Gene3D G3DSA:2.40.50.140 396 489 4.3E-16 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Gene3D G3DSA:2.40.50.140 307 395 3.4E-26 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Gene3D G3DSA:2.40.50.140 130 217 5.2E-6 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Gene3D G3DSA:2.40.50.140 219 306 2.7E-27 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Gene3D G3DSA:2.40.50.140 44 129 1.3E-12 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Pfam PF00575 S1 RNA binding domain 50 118 7.3E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Pfam PF00575 S1 RNA binding domain 314 385 2.8E-17 T 14-10-2018 IPR003029 S1 domain GO:0003676 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Pfam PF00575 S1 RNA binding domain 140 203 9.9E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Pfam PF00575 S1 RNA binding domain 221 298 1.0E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 Pfam PF00575 S1 RNA binding domain 398 477 9.2E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SMART SM00316 400 477 4.6E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SMART SM00316 51 119 4.4E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SMART SM00316 492 559 2.7 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SMART SM00316 313 385 1.6E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SMART SM00316 135 203 1.4E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SMART SM00316 222 298 1.9E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SUPERFAMILY SSF50249 49 144 1.14E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SUPERFAMILY SSF50249 293 405 4.36E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SUPERFAMILY SSF50249 385 482 5.59E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SUPERFAMILY SSF50249 221 314 3.22E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 53 71 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 368 386 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 158 175 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 140 156 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 328 347 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 71 85 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 116 135 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 PRINTS PR00681 Ribosomal protein S1 signature 250 271 7.4E-56 T 14-10-2018 P029_01160 ab431cbe339a0daa3c7c5135c2573aa1 559 SUPERFAMILY SSF50249 140 215 3.13E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_04025 aa23dc21729d29ff942619f483e044cf 1124 Pfam PF02811 PHP domain 4 165 1.6E-28 T 14-10-2018 IPR004013 PHP domain GO:0003824 P029_04025 aa23dc21729d29ff942619f483e044cf 1124 Pfam PF14579 Helix-hairpin-helix motif 786 873 7.3E-18 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_04025 aa23dc21729d29ff942619f483e044cf 1124 SMART SM00481 3 70 2.8E-20 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal P029_04025 aa23dc21729d29ff942619f483e044cf 1124 Gene3D G3DSA:1.10.10.1600 422 497 1.3E-25 T 14-10-2018 P029_04025 aa23dc21729d29ff942619f483e044cf 1124 SUPERFAMILY SSF89550 1 254 6.67E-15 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 P029_04025 aa23dc21729d29ff942619f483e044cf 1124 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 2 998 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_04025 aa23dc21729d29ff942619f483e044cf 1124 Gene3D G3DSA:3.20.20.140 1 260 8.7E-76 T 14-10-2018 P029_04025 aa23dc21729d29ff942619f483e044cf 1124 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 284 713 1.4E-167 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 P029_01220 ebba153262e21c6c7457993230947046 112 Pfam PF00237 Ribosomal protein L22p/L17e 8 108 2.8E-29 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 P029_01220 ebba153262e21c6c7457993230947046 112 SUPERFAMILY SSF54843 4 111 2.75E-34 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 P029_01220 ebba153262e21c6c7457993230947046 112 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 12 107 1.8E-30 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01220 ebba153262e21c6c7457993230947046 112 Gene3D G3DSA:3.90.470.10 2 112 1.6E-35 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 P029_01220 ebba153262e21c6c7457993230947046 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 23.112 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 245 16.422 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 3.1E-38 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 3.1E-38 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 3.1E-38 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 161 189 3.1E-38 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 228 1.1E-64 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 ProSitePatterns PS01218 TatC family signature. 161 180 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site P029_01925 3eb3c170c11d5166dd052ca5f00a4778 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 233 1.1E-63 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 SUPERFAMILY SSF52540 318 555 1.74E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 SUPERFAMILY SSF90123 5 314 1.44E-40 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 Pfam PF00664 ABC transporter transmembrane region 22 279 2.9E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 Pfam PF00005 ABC transporter 347 494 4.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 Gene3D G3DSA:3.40.50.300 324 563 9.2E-66 T 14-10-2018 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 13 556 1.4E-201 T 14-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 SMART SM00382 355 543 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01080 7dbc1466d2257524eb5a64457fc3d52c 1079 Gene3D G3DSA:1.20.1560.10 7 316 1.2E-36 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P029_02910 489cf01c175111230f7748e93f336262 443 Pfam PF01523 Putative modulator of DNA gyrase 21 312 9.7E-53 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 P029_02910 489cf01c175111230f7748e93f336262 443 SUPERFAMILY SSF111283 4 442 1.15E-109 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 P029_02910 489cf01c175111230f7748e93f336262 443 Gene3D G3DSA:3.30.2290.10 2 221 3.7E-57 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Pfam PF01103 Surface antigen 449 758 3.3E-51 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Gene3D G3DSA:3.10.20.310 91 170 2.0E-17 T 14-10-2018 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Gene3D G3DSA:3.10.20.310 22 90 1.4E-10 T 14-10-2018 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Pfam PF07244 Surface antigen variable number repeat 350 422 1.1E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Pfam PF07244 Surface antigen variable number repeat 173 264 3.1E-7 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Pfam PF07244 Surface antigen variable number repeat 91 169 1.8E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Pfam PF07244 Surface antigen variable number repeat 286 344 1.6E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 PIRSF PIRSF006076 1 768 4.1E-192 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Gene3D G3DSA:3.10.20.310 266 347 5.5E-7 T 14-10-2018 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 3 772 20.52 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 770 1.4E-215 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Gene3D G3DSA:2.40.160.50 424 770 8.5E-73 T 14-10-2018 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Gene3D G3DSA:3.10.20.310 172 265 1.6E-15 T 14-10-2018 P029_04930 3ad77063a8b6af8269e6fee2b54703b1 772 Gene3D G3DSA:3.10.20.310 348 422 8.7E-22 T 14-10-2018 P029_05030 d1f25f47126dbd61b8526cf1c44a3344 384 Gene3D G3DSA:2.40.160.20 242 382 2.7E-9 T 14-10-2018 P029_05030 d1f25f47126dbd61b8526cf1c44a3344 384 Pfam PF01617 Surface antigen 39 377 2.3E-70 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05030 d1f25f47126dbd61b8526cf1c44a3344 384 SUPERFAMILY SSF56925 39 375 2.88E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01805 06a4845f425b988d9a21c681c1970512 75 Pfam PF13932 GidA associated domain 7 69 2.4E-34 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 P029_01805 06a4845f425b988d9a21c681c1970512 75 Gene3D G3DSA:3.50.50.60 1 64 3.6E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 Pfam PF02132 RecR protein 37 74 2.3E-12 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 Gene3D G3DSA:1.10.8.420 1 48 1.0E-9 T 14-10-2018 P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 Gene3D G3DSA:3.40.1360.10 73 193 3.4E-39 T 14-10-2018 P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 Pfam PF13662 Toprim domain 77 167 8.8E-22 T 14-10-2018 IPR006171 TOPRIM domain P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 SMART SM00493 76 161 0.0087 T 14-10-2018 IPR006171 TOPRIM domain P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 ProSitePatterns PS01300 RecR protein signature. 53 74 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 SUPERFAMILY SSF111304 3 193 8.89E-67 T 14-10-2018 IPR023627 Recombination protein RecR P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 TIGRFAM TIGR00615 recR: recombination protein RecR 3 191 3.1E-58 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 P029_03950 6c4fcfc718c5c830f7053d32f3661569 194 Hamap MF_00017 Recombination protein RecR [recR]. 1 194 85.314 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 P029_00865 481041343b8ded0d93a24e154dc40a0a 206 Pfam PF10090 Histidine phosphotransferase C-terminal domain 74 197 3.9E-25 T 14-10-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal P029_00865 481041343b8ded0d93a24e154dc40a0a 206 Gene3D G3DSA:3.30.565.10 74 202 3.4E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_00390 05099be39766a775b1be77ba48dc0e19 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.2E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00390 05099be39766a775b1be77ba48dc0e19 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.2E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00390 05099be39766a775b1be77ba48dc0e19 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 230 244 1.2E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00390 05099be39766a775b1be77ba48dc0e19 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.2E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00390 05099be39766a775b1be77ba48dc0e19 292 SUPERFAMILY SSF53474 13 278 9.07E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_00390 05099be39766a775b1be77ba48dc0e19 292 Gene3D G3DSA:3.40.50.1820 2 287 1.1E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_00390 05099be39766a775b1be77ba48dc0e19 292 Pfam PF00561 alpha/beta hydrolase fold 34 132 7.7E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00550 98e0f1eaed0666089a097358e02fc434 420 SUPERFAMILY SSF55681 6 315 2.11E-88 T 14-10-2018 P029_00550 98e0f1eaed0666089a097358e02fc434 420 SUPERFAMILY SSF52954 325 415 1.96E-17 T 14-10-2018 P029_00550 98e0f1eaed0666089a097358e02fc434 420 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 414 29.857 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 P029_00550 98e0f1eaed0666089a097358e02fc434 420 Pfam PF13393 Histidyl-tRNA synthetase 11 311 4.6E-43 T 14-10-2018 P029_00550 98e0f1eaed0666089a097358e02fc434 420 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 404 1.2E-131 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 P029_00550 98e0f1eaed0666089a097358e02fc434 420 PIRSF PIRSF001549 4 416 1.3E-109 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 P029_00550 98e0f1eaed0666089a097358e02fc434 420 Gene3D G3DSA:3.30.930.10 5 321 2.1E-104 T 14-10-2018 P029_00550 98e0f1eaed0666089a097358e02fc434 420 Pfam PF03129 Anticodon binding domain 325 414 2.1E-9 T 14-10-2018 IPR004154 Anticodon-binding P029_00550 98e0f1eaed0666089a097358e02fc434 420 Gene3D G3DSA:3.40.50.800 322 416 9.4E-18 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily P029_03890 a7e416f02d0a68638a793a5fbea7bb06 65 SUPERFAMILY SSF140319 1 61 1.57E-20 T 14-10-2018 IPR036762 IscX-like superfamily P029_03890 a7e416f02d0a68638a793a5fbea7bb06 65 Pfam PF04384 Iron-sulphur cluster assembly 2 63 1.3E-24 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 P029_03890 a7e416f02d0a68638a793a5fbea7bb06 65 PIRSF PIRSF039003 1 63 1.8E-29 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 P029_03890 a7e416f02d0a68638a793a5fbea7bb06 65 Gene3D G3DSA:1.10.10.600 1 63 1.4E-20 T 14-10-2018 IPR036762 IscX-like superfamily P029_03890 a7e416f02d0a68638a793a5fbea7bb06 65 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 63 2.9E-28 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 Gene3D G3DSA:1.25.40.10 40 134 1.2E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 SUPERFAMILY SSF48452 57 132 8.73E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 SMART SM00028 89 122 3.3E-7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 Pfam PF00515 Tetratricopeptide repeat 89 122 1.5E-7 T 14-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 SUPERFAMILY SSF53335 143 329 3.62E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 Pfam PF08242 Methyltransferase domain 191 287 6.2E-14 T 14-10-2018 IPR013217 Methyltransferase type 12 P029_05405 8f71572dc3a089f6267e613b2b3bbb1c 353 Gene3D G3DSA:3.40.50.150 146 343 1.6E-23 T 14-10-2018 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Pfam PF01541 GIY-YIG catalytic domain 28 102 3.8E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease P029_03555 c9cf690256261cfa5e72259d27ab952b 614 SUPERFAMILY SSF47781 517 608 3.46E-17 T 14-10-2018 IPR010994 RuvA domain 2-like P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Gene3D G3DSA:3.40.1440.10 14 111 2.6E-26 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Gene3D G3DSA:1.10.150.20 552 607 2.6E-18 T 14-10-2018 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 26 586 1.7E-136 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Hamap MF_00203 UvrABC system protein C [uvrC]. 13 604 23.647 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Gene3D G3DSA:3.30.420.340 383 547 3.8E-44 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily P029_03555 c9cf690256261cfa5e72259d27ab952b 614 SUPERFAMILY SSF46600 202 250 3.92E-6 T 14-10-2018 IPR036876 UVR domain superfamily P029_03555 c9cf690256261cfa5e72259d27ab952b 614 SMART SM00465 26 107 8.4E-18 T 14-10-2018 IPR000305 GIY-YIG endonuclease P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 392 538 1.7E-40 T 14-10-2018 IPR001162 UvrC family homology region P029_03555 c9cf690256261cfa5e72259d27ab952b 614 Pfam PF14520 Helix-hairpin-helix domain 554 606 6.1E-9 T 14-10-2018 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 SUPERFAMILY SSF82771 26 109 1.83E-20 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 SMART SM00278 553 572 75.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P029_03555 c9cf690256261cfa5e72259d27ab952b 614 SMART SM00278 585 604 5.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 P029_03875 e30e9b82efe78b2c1f6f4a6b8dbc88c2 166 PIRSF PIRSF006162 1 166 1.9E-45 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 P029_03875 e30e9b82efe78b2c1f6f4a6b8dbc88c2 166 SUPERFAMILY SSF101307 5 159 3.01E-29 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 P029_03875 e30e9b82efe78b2c1f6f4a6b8dbc88c2 166 Pfam PF04608 Phosphatidylglycerophosphatase A 6 160 4.9E-40 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 P029_04040 1029b30ebc03b52a5752188639d8dbd6 220 Pfam PF02230 Phospholipase/Carboxylesterase 11 212 1.8E-34 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 P029_04040 1029b30ebc03b52a5752188639d8dbd6 220 SUPERFAMILY SSF53474 13 214 7.16E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_04040 1029b30ebc03b52a5752188639d8dbd6 220 Gene3D G3DSA:3.40.50.1820 10 213 3.0E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 Gene3D G3DSA:1.20.1560.10 1 316 8.5E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 Gene3D G3DSA:3.40.50.300 322 574 1.8E-83 T 14-10-2018 P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 SMART SM00382 357 543 7.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 Pfam PF00005 ABC transporter 348 497 3.8E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 Pfam PF00664 ABC transporter transmembrane region 15 279 4.2E-32 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 SUPERFAMILY SSF52540 323 568 7.18E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00670 f434f8fd7fe9e9fe68d545abe673e962 578 SUPERFAMILY SSF90123 4 311 2.49E-55 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 SUPERFAMILY SSF47323 697 950 4.86E-42 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 22 893 3.5E-259 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 674 8.0E-189 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 SUPERFAMILY SSF52374 21 674 1.73E-127 T 14-10-2018 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 Gene3D G3DSA:3.90.740.10 213 431 4.8E-226 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 Gene3D G3DSA:1.10.730.10 685 879 3.5E-44 T 14-10-2018 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 55 66 3.6E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 425 440 3.6E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 560 573 3.6E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 600 609 3.6E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 245 268 3.6E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 62 73 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 17 1097 13.632 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 Gene3D G3DSA:3.40.50.620 29 667 4.8E-226 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 Pfam PF08264 Anticodon-binding domain of tRNA 731 885 1.1E-23 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P029_03250 627d67c7ca9711452cf2af8608c9814b 1108 SUPERFAMILY SSF50677 216 427 8.16E-47 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P029_02550 ea1ca411a40e5265fafec4da917144c1 192 Gene3D G3DSA:3.30.420.40 1 129 6.1E-26 T 14-10-2018 P029_02550 ea1ca411a40e5265fafec4da917144c1 192 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 1 148 5.3E-35 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 P029_02550 ea1ca411a40e5265fafec4da917144c1 192 Pfam PF00814 Glycoprotease family 30 126 6.0E-16 T 14-10-2018 IPR000905 Gcp-like domain P029_02550 ea1ca411a40e5265fafec4da917144c1 192 SUPERFAMILY SSF53067 2 102 3.11E-19 T 14-10-2018 P029_05595 29a5d59d35acafe0e7a36eaf7cc58caf 300 Gene3D G3DSA:2.40.160.20 75 256 2.2E-6 T 14-10-2018 P029_05595 29a5d59d35acafe0e7a36eaf7cc58caf 300 Pfam PF01617 Surface antigen 39 291 2.6E-20 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05595 29a5d59d35acafe0e7a36eaf7cc58caf 300 SUPERFAMILY SSF56925 102 248 4.45E-8 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_00725 fdc66e44c395e418f5267b771e228086 191 Pfam PF07499 RuvA, C-terminal domain 149 190 1.2E-6 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 P029_00725 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF46929 149 190 7.32E-6 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily P029_00725 fdc66e44c395e418f5267b771e228086 191 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 190 21.999 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 P029_00725 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:1.10.150.20 66 135 1.5E-14 T 14-10-2018 P029_00725 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF47781 66 134 1.0E-13 T 14-10-2018 IPR010994 RuvA domain 2-like P029_00725 fdc66e44c395e418f5267b771e228086 191 Gene3D G3DSA:2.40.50.140 1 65 8.1E-16 T 14-10-2018 P029_00725 fdc66e44c395e418f5267b771e228086 191 Pfam PF01330 RuvA N terminal domain 1 62 1.7E-15 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 P029_00725 fdc66e44c395e418f5267b771e228086 191 SUPERFAMILY SSF50249 1 63 1.41E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_00725 fdc66e44c395e418f5267b771e228086 191 Pfam PF14520 Helix-hairpin-helix domain 73 127 6.1E-8 T 14-10-2018 P029_00845 6c01c0a54a9adf23cb72a65432693f82 315 Pfam PF00589 Phage integrase family 130 293 1.5E-36 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P029_00845 6c01c0a54a9adf23cb72a65432693f82 315 Gene3D G3DSA:1.10.443.10 125 299 7.1E-48 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P029_00845 6c01c0a54a9adf23cb72a65432693f82 315 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 103 1.4E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 P029_00845 6c01c0a54a9adf23cb72a65432693f82 315 Gene3D G3DSA:1.10.150.130 11 113 5.8E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal P029_00845 6c01c0a54a9adf23cb72a65432693f82 315 SUPERFAMILY SSF56349 10 298 7.06E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P029_03810 4d594d2358335d24642023802d47f824 342 SUPERFAMILY SSF51391 143 337 7.06E-63 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P029_03810 4d594d2358335d24642023802d47f824 342 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 146 339 19.988 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P029_03810 4d594d2358335d24642023802d47f824 342 Gene3D G3DSA:3.20.20.70 141 340 2.6E-59 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_03810 4d594d2358335d24642023802d47f824 342 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 158 333 4.4E-51 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P029_03810 4d594d2358335d24642023802d47f824 342 Pfam PF02581 Thiamine monophosphate synthase 154 321 1.5E-52 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 P029_02030 e7fbcea7d564e3b6ed32a41f93b0796e 229 SUPERFAMILY SSF75620 3 207 4.45E-61 T 14-10-2018 P029_02030 e7fbcea7d564e3b6ed32a41f93b0796e 229 Gene3D G3DSA:3.30.70.1660 85 181 6.4E-46 T 14-10-2018 P029_02030 e7fbcea7d564e3b6ed32a41f93b0796e 229 Pfam PF03462 PCRF domain 3 176 2.2E-48 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 P029_02030 e7fbcea7d564e3b6ed32a41f93b0796e 229 Gene3D G3DSA:3.30.160.20 182 210 6.4E-46 T 14-10-2018 P029_02030 e7fbcea7d564e3b6ed32a41f93b0796e 229 SMART SM00937 37 151 1.1E-43 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 P029_02030 e7fbcea7d564e3b6ed32a41f93b0796e 229 Gene3D G3DSA:1.20.58.410 3 69 1.4E-8 T 14-10-2018 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 64 175 1.9E-40 T 14-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 SUPERFAMILY SSF53720 529 1028 1.44E-131 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 Gene3D G3DSA:3.40.309.10 799 992 1.6E-150 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 SUPERFAMILY SSF81935 9 177 5.49E-59 T 14-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 PIRSF PIRSF000197 3 1038 0.0 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 513 1021 3.3E-185 T 14-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 Gene3D G3DSA:3.20.20.220 131 513 2.3E-121 T 14-10-2018 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 Pfam PF01619 Proline dehydrogenase 191 477 1.0E-81 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 Gene3D G3DSA:3.40.605.10 537 1025 1.6E-150 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 SUPERFAMILY SSF51730 179 520 1.06E-103 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 Pfam PF00171 Aldehyde dehydrogenase family 566 1025 5.9E-119 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 P029_02775 93ce5ccb680e0b0ac1c57db848530b79 1044 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 824 835 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 P029_00120 21f55c572ec8bde311173e28ce272194 321 SUPERFAMILY SSF142754 7 312 3.53E-111 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P029_00120 21f55c572ec8bde311173e28ce272194 321 Hamap MF_00568 Quinolinate synthase A [nadA]. 6 312 42.544 T 14-10-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P029_00120 21f55c572ec8bde311173e28ce272194 321 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 7 313 7.0E-106 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P029_00120 21f55c572ec8bde311173e28ce272194 321 Gene3D G3DSA:3.40.50.10800 174 268 4.1E-108 T 14-10-2018 P029_00120 21f55c572ec8bde311173e28ce272194 321 Gene3D G3DSA:3.40.50.10800 10 293 4.1E-108 T 14-10-2018 P029_00120 21f55c572ec8bde311173e28ce272194 321 Pfam PF02445 Quinolinate synthetase A protein 11 310 4.4E-112 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 P029_00120 21f55c572ec8bde311173e28ce272194 321 Gene3D G3DSA:3.40.50.10800 90 310 4.1E-108 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 Gene3D G3DSA:2.30.130.40 1 117 2.7E-28 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 SUPERFAMILY SSF52540 317 580 1.8E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03845 bad47f988a97bca2f25b3478128a1585 802 Hamap MF_01973 Lon protease [lon]. 9 776 64.287 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 P029_03845 bad47f988a97bca2f25b3478128a1585 802 SMART SM00464 8 203 2.3E-51 T 14-10-2018 IPR003111 Lon, substrate-binding domain P029_03845 bad47f988a97bca2f25b3478128a1585 802 Gene3D G3DSA:1.20.58.1480 123 246 2.9E-31 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 356 493 2.4E-20 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_03845 bad47f988a97bca2f25b3478128a1585 802 Gene3D G3DSA:3.40.50.300 318 494 3.8E-62 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 PIRSF PIRSF001174 1 778 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 P029_03845 bad47f988a97bca2f25b3478128a1585 802 TIGRFAM TIGR00763 lon: endopeptidase La 10 774 1.7E-271 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 P029_03845 bad47f988a97bca2f25b3478128a1585 802 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 680 688 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 P029_03845 bad47f988a97bca2f25b3478128a1585 802 Gene3D G3DSA:3.30.230.10 589 776 1.9E-77 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_03845 bad47f988a97bca2f25b3478128a1585 802 Gene3D G3DSA:1.10.8.60 495 588 7.5E-27 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 SMART SM00382 352 498 7.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_03845 bad47f988a97bca2f25b3478128a1585 802 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 202 3.5E-33 T 14-10-2018 IPR003111 Lon, substrate-binding domain P029_03845 bad47f988a97bca2f25b3478128a1585 802 SUPERFAMILY SSF54211 599 774 5.69E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_03845 bad47f988a97bca2f25b3478128a1585 802 SUPERFAMILY SSF88697 9 201 3.23E-39 T 14-10-2018 IPR015947 PUA-like superfamily P029_03845 bad47f988a97bca2f25b3478128a1585 802 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 574 776 9.1E-91 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 P029_03845 bad47f988a97bca2f25b3478128a1585 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 730 748 2.4E-51 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 2.4E-51 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 360 379 2.4E-51 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 677 696 2.4E-51 T 14-10-2018 P029_03845 bad47f988a97bca2f25b3478128a1585 802 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 599 615 2.4E-51 T 14-10-2018 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 Gene3D G3DSA:4.10.320.10 141 180 1.4E-14 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 Pfam PF02817 e3 binding domain 144 179 1.1E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 Pfam PF00364 Biotin-requiring enzyme 4 78 1.4E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 4 419 5.3E-138 T 14-10-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 Gene3D G3DSA:3.30.559.10 181 418 1.6E-90 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 Gene3D G3DSA:2.40.50.100 2 103 2.7E-27 T 14-10-2018 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 SUPERFAMILY SSF51230 1 94 6.41E-23 T 14-10-2018 IPR011053 Single hybrid motif P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 SUPERFAMILY SSF47005 138 181 3.14E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 SUPERFAMILY SSF52777 194 419 3.47E-79 T 14-10-2018 P029_05025 56a74bb8336c0539dcadd9036ddacb19 420 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 419 4.8E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 P029_05750 d3edc0356a468dd3c1646c579e4dddfa 297 SUPERFAMILY SSF160240 221 291 1.44E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 P029_05750 d3edc0356a468dd3c1646c579e4dddfa 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 293 2.8E-76 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P029_05750 d3edc0356a468dd3c1646c579e4dddfa 297 SUPERFAMILY SSF161111 12 208 9.15E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P029_05750 d3edc0356a468dd3c1646c579e4dddfa 297 Gene3D G3DSA:1.20.1510.10 12 207 1.2E-38 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily P029_05750 d3edc0356a468dd3c1646c579e4dddfa 297 Pfam PF01545 Cation efflux family 18 207 2.2E-42 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 P029_04550 7f116e7bba1e0b8237c8160cfa66172d 87 Gene3D G3DSA:2.40.160.20 1 81 1.8E-9 T 14-10-2018 P029_04550 7f116e7bba1e0b8237c8160cfa66172d 87 Pfam PF01617 Surface antigen 2 85 3.2E-36 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04550 7f116e7bba1e0b8237c8160cfa66172d 87 SUPERFAMILY SSF56925 3 77 1.36E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01200 c15bc64d0f275b324a05c8a928e7d569 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 16 202 3.6E-70 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01200 c15bc64d0f275b324a05c8a928e7d569 208 SUPERFAMILY SSF52166 1 205 2.62E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 P029_01200 c15bc64d0f275b324a05c8a928e7d569 208 Pfam PF00573 Ribosomal protein L4/L1 family 16 203 1.8E-61 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 P029_01200 c15bc64d0f275b324a05c8a928e7d569 208 Gene3D G3DSA:3.40.1370.10 1 208 3.5E-69 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 P029_01200 c15bc64d0f275b324a05c8a928e7d569 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.736 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04855 f77fe153fc55b667605926205e8ea170 335 SUPERFAMILY SSF56925 213 335 2.54E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04855 f77fe153fc55b667605926205e8ea170 335 Gene3D G3DSA:2.40.160.20 106 297 3.3E-10 T 14-10-2018 P029_04855 f77fe153fc55b667605926205e8ea170 335 Pfam PF01617 Surface antigen 175 335 2.5E-52 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04740 5f48c467cef660187fdcead04c22f6cd 211 Pfam PF01617 Surface antigen 56 211 8.2E-52 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04740 5f48c467cef660187fdcead04c22f6cd 211 SUPERFAMILY SSF56925 89 211 4.45E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04740 5f48c467cef660187fdcead04c22f6cd 211 Gene3D G3DSA:2.40.160.20 25 174 5.7E-10 T 14-10-2018 P029_02710 cc12828db876f908218b6b417109e023 338 Pfam PF07722 Peptidase C26 126 292 2.9E-4 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 P029_02710 cc12828db876f908218b6b417109e023 338 SUPERFAMILY SSF52317 83 295 6.25E-16 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_02710 cc12828db876f908218b6b417109e023 338 Gene3D G3DSA:3.40.50.880 89 308 4.6E-17 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_05765 0e38f892ccf6b22224d2e2c380954e18 127 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 77 112 3.5E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 P029_05765 0e38f892ccf6b22224d2e2c380954e18 127 Gene3D G3DSA:1.20.120.910 1 119 1.9E-32 T 14-10-2018 P029_05765 0e38f892ccf6b22224d2e2c380954e18 127 SUPERFAMILY SSF109635 1 77 5.23E-19 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily P029_05765 0e38f892ccf6b22224d2e2c380954e18 127 SUPERFAMILY SSF57716 79 117 6.13E-9 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 SUPERFAMILY SSF82714 182 262 3.66E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:3.30.70.1320 135 324 1.7E-215 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Pfam PF00873 AcrB/AcrD/AcrF family 5 1018 1.1E-154 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 SUPERFAMILY SSF82693 136 322 1.92E-11 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:1.20.1640.10 11 505 1.7E-215 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:3.30.70.1440 656 849 1.7E-215 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 SUPERFAMILY SSF82866 794 1024 1.83E-33 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:3.30.2090.10 177 267 1.7E-215 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P029_01930 29ddcef51a71efb3132f35977c588355 1032 SUPERFAMILY SSF82866 288 488 1.1E-39 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:3.30.2090.10 706 794 1.7E-215 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:3.30.70.1430 41 802 1.7E-215 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 5.9E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 5.9E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 PRINTS PR00702 Acriflavin resistance protein family signature 435 458 5.9E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 5.9E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 5.9E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 PRINTS PR00702 Acriflavin resistance protein family signature 382 406 5.9E-31 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 P029_01930 29ddcef51a71efb3132f35977c588355 1032 SUPERFAMILY SSF82693 41 134 2.54E-18 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:3.30.70.1430 562 655 1.7E-215 T 14-10-2018 P029_01930 29ddcef51a71efb3132f35977c588355 1032 Gene3D G3DSA:1.20.1640.10 506 1018 1.7E-215 T 14-10-2018 P029_04860 1471e58f1e9c3ff766a06c38c02ae337 225 SUPERFAMILY SSF56925 136 215 7.85E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04860 1471e58f1e9c3ff766a06c38c02ae337 225 Pfam PF01617 Surface antigen 99 223 2.7E-42 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04860 1471e58f1e9c3ff766a06c38c02ae337 225 Gene3D G3DSA:2.40.160.20 7 219 3.4E-10 T 14-10-2018 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 Gene3D G3DSA:3.40.50.720 4 327 1.2E-120 T 14-10-2018 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 2.2E-30 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 SUPERFAMILY SSF51735 3 179 1.18E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 315 1.5E-49 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 PIRSF PIRSF000149 1 335 9.6E-123 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 SUPERFAMILY SSF55347 155 316 4.68E-56 T 14-10-2018 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 Gene3D G3DSA:3.30.360.10 154 317 1.2E-120 T 14-10-2018 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 SMART SM00846 3 155 3.6E-66 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 5.0E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 5.0E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 5.0E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 113 126 5.0E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_05520 e681a7cb451fb6530c3bd7102e1cc821 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 5.0E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 SMART SM00836 456 579 1.4E-47 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 17 99 3.7E-15 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 SMART SM01016 12 100 3.3E-22 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 SUPERFAMILY SSF52374 122 466 2.95E-78 T 14-10-2018 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Gene3D G3DSA:3.40.50.620 129 450 1.3E-132 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Pfam PF00750 tRNA synthetases class I (R) 118 444 1.5E-19 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 139 148 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Gene3D G3DSA:1.10.730.10 451 579 1.3E-132 T 14-10-2018 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Gene3D G3DSA:3.30.1360.70 12 125 2.3E-15 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 SUPERFAMILY SSF47323 451 579 3.99E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Hamap MF_00123 Arginine--tRNA ligase [argS]. 12 579 22.583 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 18 579 6.8E-102 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 144 160 5.0E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 325 346 5.0E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 168 181 5.0E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 144 5.0E-23 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 Pfam PF05746 DALR anticodon binding domain 456 579 1.4E-23 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 P029_02890 78f686561af0e7797e87f10070cb5c8f 580 SUPERFAMILY SSF55190 8 120 3.14E-15 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 194 207 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 Gene3D G3DSA:3.90.640.10 226 298 2.7E-91 T 14-10-2018 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 SUPERFAMILY SSF53067 17 186 8.29E-43 T 14-10-2018 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 Gene3D G3DSA:3.30.420.40 187 356 2.7E-91 T 14-10-2018 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 21 28 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 460 476 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 323 339 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 380 399 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 354 374 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 17 30 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 45 57 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 141 161 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 PRINTS PR00301 70kDa heat shock protein signature 200 210 4.0E-41 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 Gene3D G3DSA:3.30.420.40 20 366 2.7E-91 T 14-10-2018 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 Pfam PF00012 Hsp70 protein 19 542 3.9E-131 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 Gene3D G3DSA:2.60.34.10 376 544 4.2E-47 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 SUPERFAMILY SSF53067 189 371 2.52E-41 T 14-10-2018 P029_02810 1f5071f4fcec543731786c15f3bf4cd0 592 SUPERFAMILY SSF100920 378 528 1.57E-39 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 P029_00175 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Gene3D G3DSA:1.10.443.10 110 300 5.3E-48 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 P029_00175 2bc58b0d79d002e7c47d6cd2be47a1c0 311 SUPERFAMILY SSF56349 8 299 3.53E-47 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 P029_00175 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Pfam PF00589 Phage integrase family 111 292 2.5E-36 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 P029_00175 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 87 5.4E-13 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 P029_00175 2bc58b0d79d002e7c47d6cd2be47a1c0 311 Gene3D G3DSA:1.10.150.130 4 97 4.5E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal P029_05045 e5acd58845d645633aa9b232b08a4756 412 Pfam PF00579 tRNA synthetases class I (W and Y) 33 321 3.1E-70 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_05045 e5acd58845d645633aa9b232b08a4756 412 Gene3D G3DSA:3.40.50.620 1 222 7.7E-83 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_05045 e5acd58845d645633aa9b232b08a4756 412 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 5 410 39.819 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 P029_05045 e5acd58845d645633aa9b232b08a4756 412 Gene3D G3DSA:3.10.290.10 328 388 4.1E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P029_05045 e5acd58845d645633aa9b232b08a4756 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 4.3E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P029_05045 e5acd58845d645633aa9b232b08a4756 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 4.3E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P029_05045 e5acd58845d645633aa9b232b08a4756 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 4.3E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P029_05045 e5acd58845d645633aa9b232b08a4756 412 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 4.3E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P029_05045 e5acd58845d645633aa9b232b08a4756 412 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 6 408 2.7E-103 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 P029_05045 e5acd58845d645633aa9b232b08a4756 412 SUPERFAMILY SSF52374 6 321 2.04E-95 T 14-10-2018 P029_05045 e5acd58845d645633aa9b232b08a4756 412 SUPERFAMILY SSF55174 315 409 2.94E-11 T 14-10-2018 P029_05045 e5acd58845d645633aa9b232b08a4756 412 Gene3D G3DSA:1.10.240.10 223 327 8.4E-31 T 14-10-2018 P029_02305 6518b22adb91f8c112826912fe743d35 568 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 360 556 6.1E-59 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02305 6518b22adb91f8c112826912fe743d35 568 Gene3D G3DSA:2.70.98.90 63 339 2.2E-25 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily P029_02305 6518b22adb91f8c112826912fe743d35 568 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 559 18.851 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 Pfam PF02096 60Kd inner membrane protein 361 556 4.3E-51 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 Pfam PF14849 YidC periplasmic domain 66 349 2.1E-64 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain P029_02305 6518b22adb91f8c112826912fe743d35 568 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 359 1.7E-80 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR00701 60kDa inner membrane protein signature 422 445 2.2E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.2E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR00701 60kDa inner membrane protein signature 331 351 2.2E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.2E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR00701 60kDa inner membrane protein signature 248 263 2.2E-18 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR01900 YidC translocation/secretion protein signature 512 536 1.6E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR01900 YidC translocation/secretion protein signature 492 507 1.6E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02305 6518b22adb91f8c112826912fe743d35 568 PRINTS PR01900 YidC translocation/secretion protein signature 346 362 1.6E-15 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_02540 75edb0053caa0c3b67e402d75092030b 514 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 43 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02540 75edb0053caa0c3b67e402d75092030b 514 Gene3D G3DSA:3.40.50.620 13 272 1.3E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_02540 75edb0053caa0c3b67e402d75092030b 514 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 8 507 8.1E-59 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 P029_02540 75edb0053caa0c3b67e402d75092030b 514 SUPERFAMILY SSF48163 321 508 8.24E-29 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_02540 75edb0053caa0c3b67e402d75092030b 514 Gene3D G3DSA:1.10.10.350 419 509 5.0E-17 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 P029_02540 75edb0053caa0c3b67e402d75092030b 514 Pfam PF01921 tRNA synthetases class I (K) 7 353 7.4E-128 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 P029_02540 75edb0053caa0c3b67e402d75092030b 514 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 6 510 28.484 T 14-10-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 P029_02540 75edb0053caa0c3b67e402d75092030b 514 Gene3D G3DSA:2.30.30.300 174 219 1.3E-74 T 14-10-2018 IPR023386 Lysine-tRNA ligase, insertion domain superfamily GO:0004824 KEGG: 00970+6.1.1.6 P029_02540 75edb0053caa0c3b67e402d75092030b 514 SUPERFAMILY SSF52374 8 314 1.85E-55 T 14-10-2018 P029_02165 67887156a0540d66a215728b6a28e4ce 300 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 47 54 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 6 299 5.6E-81 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 Gene3D G3DSA:3.40.50.1370 132 278 1.9E-83 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 6 143 9.0E-35 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 SUPERFAMILY SSF53671 4 300 3.4E-82 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 1.5E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 1.5E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 47 66 1.5E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.5E-14 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 131 148 2.9E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 280 294 2.9E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 257 262 2.9E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 37 59 2.9E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 216 225 2.9E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 84 2.9E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 297 8.8E-23 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 P029_02165 67887156a0540d66a215728b6a28e4ce 300 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 4 300 33.812 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02165 67887156a0540d66a215728b6a28e4ce 300 Gene3D G3DSA:3.40.50.1370 9 295 1.9E-83 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Gene3D G3DSA:3.10.20.590 766 826 1.5E-10 T 14-10-2018 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Pfam PF09334 tRNA synthetases class I (M) 29 164 9.7E-20 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 215 390 6.7E-52 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 SUPERFAMILY SSF52374 2 639 6.76E-135 T 14-10-2018 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 SUPERFAMILY SSF50677 220 402 3.35E-41 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Pfam PF08264 Anticodon-binding domain of tRNA 667 776 2.2E-14 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 824 20.332 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Gene3D G3DSA:3.40.50.620 26 552 1.6E-291 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 585 629 1.3E-9 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 404 558 3.2E-12 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 SUPERFAMILY SSF47323 633 825 1.2E-22 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 120 137 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 208 227 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 146 162 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 543 553 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 510 532 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 178 191 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 PRINTS PR00985 Leucyl-tRNA synthetase signature 474 492 2.7E-44 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Gene3D G3DSA:3.10.330.110 553 599 1.6E-291 T 14-10-2018 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Gene3D G3DSA:3.90.740.10 220 401 1.6E-291 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 Gene3D G3DSA:1.10.730.10 19 757 1.6E-291 T 14-10-2018 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 35 46 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_02270 ce428175a5bc8d70c93e1b0a6de87fc9 826 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 18 824 7.9E-284 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 P029_00095 0c182a43226599276e27d25890b25120 339 SUPERFAMILY SSF51726 16 338 1.92E-82 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P029_00095 0c182a43226599276e27d25890b25120 339 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 24 33 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P029_00095 0c182a43226599276e27d25890b25120 339 Gene3D G3DSA:3.20.20.210 8 339 9.0E-98 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 P029_00095 0c182a43226599276e27d25890b25120 339 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 16 338 1.2E-93 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P029_00095 0c182a43226599276e27d25890b25120 339 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 16 338 2.2E-99 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 P029_03080 bb1707e7435564d14dbba514371d925f 194 Gene3D G3DSA:3.40.50.1950 6 194 2.9E-73 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P029_03080 bb1707e7435564d14dbba514371d925f 194 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 189 4.2E-68 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like P029_03080 bb1707e7435564d14dbba514371d925f 194 Pfam PF02441 Flavoprotein 7 171 1.7E-26 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 P029_03080 bb1707e7435564d14dbba514371d925f 194 SUPERFAMILY SSF52507 7 184 2.22E-58 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P029_03080 bb1707e7435564d14dbba514371d925f 194 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 6 191 34.994 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like P029_05645 79d6a82aa594462c6776390285c67adb 187 Gene3D G3DSA:3.90.45.10 1 185 1.2E-59 T 14-10-2018 IPR036821 Peptide deformylase superfamily P029_05645 79d6a82aa594462c6776390285c67adb 187 PRINTS PR01576 Peptide deformylase signature 108 119 6.4E-34 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 PRINTS PR01576 Peptide deformylase signature 139 168 6.4E-34 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 PRINTS PR01576 Peptide deformylase signature 35 64 6.4E-34 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 PRINTS PR01576 Peptide deformylase signature 120 138 6.4E-34 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 SUPERFAMILY SSF56420 3 183 9.03E-57 T 14-10-2018 IPR036821 Peptide deformylase superfamily P029_05645 79d6a82aa594462c6776390285c67adb 187 PIRSF PIRSF004749 1 187 4.0E-51 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 Pfam PF01327 Polypeptide deformylase 4 171 5.4E-52 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 Hamap MF_00163 Peptide deformylase [def]. 2 181 29.469 T 14-10-2018 IPR023635 Peptide deformylase P029_05645 79d6a82aa594462c6776390285c67adb 187 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 7 178 1.6E-46 T 14-10-2018 IPR023635 Peptide deformylase P029_00240 2bbf7adbb57ddbb73e5e2d88e20abc7c 71 Gene3D G3DSA:2.20.25.10 9 64 4.0E-23 T 14-10-2018 P029_00240 2bbf7adbb57ddbb73e5e2d88e20abc7c 71 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 2 55 26.138 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 P029_00240 2bbf7adbb57ddbb73e5e2d88e20abc7c 71 SUPERFAMILY SSF158997 2 55 1.22E-19 T 14-10-2018 P029_00240 2bbf7adbb57ddbb73e5e2d88e20abc7c 71 Pfam PF03966 Trm112p-like protein 3 42 1.8E-7 T 14-10-2018 IPR005651 Trm112-like P029_00720 683c91b4f682d33ba2b65af910bbca81 331 Gene3D G3DSA:1.10.10.10 259 330 2.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_00720 683c91b4f682d33ba2b65af910bbca81 331 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 325 9.5E-28 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 SUPERFAMILY SSF46785 259 325 7.62E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P029_00720 683c91b4f682d33ba2b65af910bbca81 331 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 325 3.0E-26 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 SMART SM00382 53 184 7.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00720 683c91b4f682d33ba2b65af910bbca81 331 Gene3D G3DSA:3.40.50.300 22 183 7.2E-38 T 14-10-2018 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 Gene3D G3DSA:1.10.8.60 184 257 2.9E-25 T 14-10-2018 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 331 141.514 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 326 9.6E-128 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 237 4.0E-107 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 P029_00720 683c91b4f682d33ba2b65af910bbca81 331 SUPERFAMILY SSF52540 22 249 1.73E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 2.7E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 SUPERFAMILY SSF116842 8 67 5.75E-17 T 14-10-2018 P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 Pfam PF02609 Exonuclease VII small subunit 9 59 3.4E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 Gene3D G3DSA:1.10.287.1040 4 75 1.1E-18 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 13.632 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 47 1.0E-10 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P029_00370 2390288cfb55fdd8e0ed55a1785fc849 75 PIRSF PIRSF006488 1 75 1.1E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 P029_01155 6db9e6331ec3a3a98816468ab768936f 298 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 54 256 4.8E-66 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 P029_01155 6db9e6331ec3a3a98816468ab768936f 298 Pfam PF01343 Peptidase family S49 110 259 3.5E-44 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 P029_01155 6db9e6331ec3a3a98816468ab768936f 298 SUPERFAMILY SSF52096 48 245 7.05E-39 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P029_01155 6db9e6331ec3a3a98816468ab768936f 298 Gene3D G3DSA:3.90.226.10 57 253 5.8E-65 T 14-10-2018 P029_01155 6db9e6331ec3a3a98816468ab768936f 298 Gene3D G3DSA:3.40.1750.20 149 215 5.8E-65 T 14-10-2018 P029_04820 2ca0325771eec2b74b0da3c999affbc4 218 SUPERFAMILY SSF56925 115 200 3.66E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04820 2ca0325771eec2b74b0da3c999affbc4 218 Gene3D G3DSA:2.40.160.20 65 204 7.7E-10 T 14-10-2018 P029_04820 2ca0325771eec2b74b0da3c999affbc4 218 Pfam PF01617 Surface antigen 89 210 2.3E-41 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01800 5194465b351ff8cbc81ba12e6224cf41 119 Pfam PF01134 Glucose inhibited division protein A 1 90 3.1E-34 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 P029_01800 5194465b351ff8cbc81ba12e6224cf41 119 Gene3D G3DSA:2.40.30.260 1 74 2.6E-35 T 14-10-2018 P029_01800 5194465b351ff8cbc81ba12e6224cf41 119 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 2 16 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 P029_04150 c3d577dabd58f63a220379e950764637 66 Gene3D G3DSA:1.20.5.1030 1 59 5.2E-11 T 14-10-2018 IPR038379 SecE superfamily P029_04150 c3d577dabd58f63a220379e950764637 66 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 7 57 3.1E-11 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_04150 c3d577dabd58f63a220379e950764637 66 Hamap MF_00422 Protein translocase subunit SecE [secE]. 3 58 10.89 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_04150 c3d577dabd58f63a220379e950764637 66 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 5 60 1.4E-12 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 P029_04965 948cd473e05452b42e9e4b965d46644c 409 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 179 233 5.6E-9 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 P029_04965 948cd473e05452b42e9e4b965d46644c 409 Gene3D G3DSA:3.30.460.10 2 144 1.4E-41 T 14-10-2018 P029_04965 948cd473e05452b42e9e4b965d46644c 409 Gene3D G3DSA:1.10.3090.10 145 337 4.1E-32 T 14-10-2018 P029_04965 948cd473e05452b42e9e4b965d46644c 409 SUPERFAMILY SSF81891 146 403 3.53E-43 T 14-10-2018 P029_04965 948cd473e05452b42e9e4b965d46644c 409 SUPERFAMILY SSF81301 10 144 2.51E-38 T 14-10-2018 P029_04965 948cd473e05452b42e9e4b965d46644c 409 Pfam PF01743 Poly A polymerase head domain 26 146 3.5E-28 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Pfam PF12631 MnmE helical domain 124 442 3.2E-52 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 SUPERFAMILY SSF52540 75 366 5.84E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05085 ee03bea1be2beaf653206ed817ba912c 445 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 445 1.9E-93 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 SUPERFAMILY SSF116878 122 445 1.57E-46 T 14-10-2018 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 445 30.658 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Gene3D G3DSA:3.30.1360.120 1 122 1.0E-39 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Gene3D G3DSA:3.40.50.300 218 377 2.6E-102 T 14-10-2018 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Pfam PF01926 50S ribosome-binding GTPase 219 329 8.1E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Gene3D G3DSA:1.20.120.430 123 445 2.6E-102 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 339 3.5E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_05085 ee03bea1be2beaf653206ed817ba912c 445 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 121 3.5E-35 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 SUPERFAMILY SSF50346 97 165 5.81E-11 T 14-10-2018 IPR011033 PRC-barrel-like superfamily P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 SUPERFAMILY SSF50447 7 91 7.77E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 Gene3D G3DSA:2.40.30.60 6 91 1.3E-16 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 165 9.8E-35 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 Gene3D G3DSA:2.30.30.240 92 168 4.5E-8 T 14-10-2018 P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 167 20.216 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 P029_05355 83a4125114d75598acc3f98b01bc0ab9 171 Pfam PF01782 RimM N-terminal domain 10 86 5.1E-17 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 P029_05435 7e21db1ff82436ef5e58971402af8bd6 215 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 13 46 1.1E-10 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative P029_05435 7e21db1ff82436ef5e58971402af8bd6 215 Pfam PF13717 zinc-ribbon domain 13 46 2.1E-11 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 Pfam PF00889 Elongation factor TS 70 285 7.1E-51 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 SUPERFAMILY SSF54713 57 285 4.39E-39 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 277 6.3E-66 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 Gene3D G3DSA:3.30.479.20 149 285 3.9E-34 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 52.803 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 Gene3D G3DSA:1.10.8.10 3 55 3.6E-22 T 14-10-2018 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 Gene3D G3DSA:3.30.479.20 56 144 1.5E-12 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 SUPERFAMILY SSF46934 1 54 1.63E-16 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 P029_01735 d07204a5da5f1c6186c80f471b048ef1 287 Gene3D G3DSA:1.10.286.20 202 246 3.9E-34 T 14-10-2018 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 PRINTS PR00315 GTP-binding elongation factor signature 76 86 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 PRINTS PR00315 GTP-binding elongation factor signature 8 21 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 PRINTS PR00315 GTP-binding elongation factor signature 128 137 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 PRINTS PR00315 GTP-binding elongation factor signature 92 103 3.4E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Pfam PF00679 Elongation factor G C-terminus 401 483 2.3E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Gene3D G3DSA:3.30.70.870 288 369 1.0E-32 T 14-10-2018 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 SMART SM00838 403 488 0.0014 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Gene3D G3DSA:2.40.30.10 188 287 4.3E-31 T 14-10-2018 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 TIGRFAM TIGR01393 lepA: elongation factor 4 5 596 1.5E-275 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 175 8.2E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 275.295 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Gene3D G3DSA:3.30.70.2570 481 555 1.8E-31 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 SUPERFAMILY SSF54980 295 372 1.29E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 594 8.9E-47 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Gene3D G3DSA:3.30.70.3380 370 479 1.7E-38 T 14-10-2018 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 SUPERFAMILY SSF52540 3 234 2.09E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Gene3D G3DSA:3.40.50.300 1 187 4.9E-70 T 14-10-2018 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 SUPERFAMILY SSF54980 401 495 3.6E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Pfam PF03144 Elongation factor Tu domain 2 207 277 9.4E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 P029_03130 33d619a009dcb826a9c50d5e4ee0a008 598 Pfam PF00009 Elongation factor Tu GTP binding domain 5 183 1.9E-50 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 P029_01235 b6e0714188360142342c44fa66d63627 68 SUPERFAMILY SSF46561 4 63 1.3E-12 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01235 b6e0714188360142342c44fa66d63627 68 Gene3D G3DSA:1.20.58.1890 1 64 2.6E-11 T 14-10-2018 P029_01235 b6e0714188360142342c44fa66d63627 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 61 11.41 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01235 b6e0714188360142342c44fa66d63627 68 Pfam PF00831 Ribosomal L29 protein 6 59 1.2E-11 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01235 b6e0714188360142342c44fa66d63627 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 59 1.7E-11 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 35 52 9.8E-43 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 194 218 9.8E-43 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 146 172 9.8E-43 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 111 131 9.8E-43 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 52 72 9.8E-43 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 90 110 9.8E-43 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 35 214 7.2E-64 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_00730 bc9f51e62f8980b9339da514a9ffdd7e 235 Pfam PF01578 Cytochrome C assembly protein 16 174 5.9E-27 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PIRSF PIRSF000350 1 449 1.6E-69 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 8.7E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 Gene3D G3DSA:3.30.390.30 351 468 8.3E-36 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 Gene3D G3DSA:3.50.50.60 7 333 3.7E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 SUPERFAMILY SSF51905 2 342 1.38E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-39 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 1.9E-39 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 1.9E-39 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 1.9E-39 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 1.9E-39 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 467 1.9E-139 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 333 3.9E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 SUPERFAMILY SSF55424 348 463 4.98E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 4.8E-70 T 14-10-2018 P029_01710 d1739033606f1a3e2c57930f7decc4aa 468 Gene3D G3DSA:3.50.50.60 155 277 3.7E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_01245 3ec739cae251f553c41c720362e64c15 119 Pfam PF00238 Ribosomal protein L14p/L23e 1 119 1.7E-41 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 P029_01245 3ec739cae251f553c41c720362e64c15 119 SUPERFAMILY SSF50193 1 118 1.11E-40 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 P029_01245 3ec739cae251f553c41c720362e64c15 119 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 119 24.042 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 P029_01245 3ec739cae251f553c41c720362e64c15 119 SMART SM01374 1 119 1.6E-58 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 P029_01245 3ec739cae251f553c41c720362e64c15 119 Gene3D G3DSA:2.40.150.20 1 119 2.7E-41 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 P029_01245 3ec739cae251f553c41c720362e64c15 119 ProSitePatterns PS00049 Ribosomal protein L14 signature. 58 84 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01245 3ec739cae251f553c41c720362e64c15 119 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 119 2.0E-40 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 P029_05570 86bbda103735219ef401f498cc8d7ad3 251 SUPERFAMILY SSF56925 125 251 3.14E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05570 86bbda103735219ef401f498cc8d7ad3 251 Pfam PF01617 Surface antigen 102 251 7.6E-32 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02570 47d024b39b1b072050cf499f2e9d6b9f 273 Gene3D G3DSA:2.40.10.340 123 201 1.4E-12 T 14-10-2018 P029_02570 47d024b39b1b072050cf499f2e9d6b9f 273 Pfam PF04085 rod shape-determining protein MreC 134 266 1.8E-20 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 P029_03610 e408326b896ec6358b5e9679cb155778 635 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 265 6.5E-71 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 P029_03610 e408326b896ec6358b5e9679cb155778 635 Pfam PF13361 UvrD-like helicase C-terminal domain 271 599 2.9E-66 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 P029_03610 e408326b896ec6358b5e9679cb155778 635 Gene3D G3DSA:3.40.50.300 4 267 2.7E-92 T 14-10-2018 P029_03610 e408326b896ec6358b5e9679cb155778 635 SUPERFAMILY SSF52540 2 626 1.01E-159 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03610 e408326b896ec6358b5e9679cb155778 635 Gene3D G3DSA:3.40.50.300 274 617 9.6E-111 T 14-10-2018 P029_03610 e408326b896ec6358b5e9679cb155778 635 Gene3D G3DSA:1.10.486.10 374 530 9.6E-111 T 14-10-2018 P029_03610 e408326b896ec6358b5e9679cb155778 635 Gene3D G3DSA:1.10.10.160 103 183 2.7E-92 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily P029_01030 ea7c669fb157884745d4d66b209cae3a 94 SUPERFAMILY SSF50129 1 92 7.77E-26 T 14-10-2018 IPR011032 GroES-like superfamily P029_01030 ea7c669fb157884745d4d66b209cae3a 94 SMART SM00883 2 93 2.3E-37 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 24 45 1.5E-22 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.5E-22 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.5E-22 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 PRINTS PR00297 10kDa chaperonin signature 3 18 1.5E-22 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 Gene3D G3DSA:2.30.33.40 1 94 3.1E-28 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 Pfam PF00166 Chaperonin 10 Kd subunit 3 92 4.6E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_01030 ea7c669fb157884745d4d66b209cae3a 94 Hamap MF_00580 10 kDa chaperonin [groS]. 2 94 19.862 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 P029_05000 f5a78452d050eb876bf4589eda91de06 87 Gene3D G3DSA:3.40.50.300 32 87 1.7E-16 T 14-10-2018 P029_05000 f5a78452d050eb876bf4589eda91de06 87 Pfam PF00154 recA bacterial DNA recombination protein 13 87 3.0E-31 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 P029_05000 f5a78452d050eb876bf4589eda91de06 87 SUPERFAMILY SSF52540 11 86 2.99E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 136 1.1E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 Gene3D G3DSA:1.10.260.50 162 416 8.7E-100 T 14-10-2018 P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 Gene3D G3DSA:1.10.10.10 1 144 1.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 Pfam PF02082 Transcriptional regulator 3 84 2.9E-14 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 Gene3D G3DSA:3.90.1150.10 151 505 8.7E-100 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 Gene3D G3DSA:3.40.640.10 209 373 8.7E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 Pfam PF00266 Aminotransferase class-V 151 502 3.5E-51 T 14-10-2018 IPR000192 Aminotransferase class V domain P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 SUPERFAMILY SSF53383 149 511 1.45E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_02785 901ee9b162f87a5b1aaf975a564a0f83 518 SUPERFAMILY SSF46785 3 139 2.36E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily P029_02425 da52fbafe26adb4900ea11cd0436c075 607 SUPERFAMILY SSF57783 9 99 2.21E-28 T 14-10-2018 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 SUPERFAMILY SSF56731 112 415 1.96E-79 T 14-10-2018 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF13662 Toprim domain 249 313 6.7E-14 T 14-10-2018 IPR006171 TOPRIM domain P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.40.1360.10 230 355 3.1E-31 T 14-10-2018 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 PIRSF PIRSF002811 3 602 1.4E-169 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 240 4.1E-30 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Hamap MF_00974 DNA primase [dnaG]. 5 602 22.663 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 SMART SM00400 38 92 7.2E-26 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Pfam PF01807 CHC2 zinc finger 10 101 8.1E-31 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.90.580.10 4 103 4.9E-32 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 TIGRFAM TIGR01391 dnaG: DNA primase 11 410 4.6E-109 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 P029_02425 da52fbafe26adb4900ea11cd0436c075 607 Gene3D G3DSA:3.90.980.10 107 229 3.6E-27 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily P029_02425 da52fbafe26adb4900ea11cd0436c075 607 SMART SM00493 248 319 5.8E-13 T 14-10-2018 IPR006171 TOPRIM domain P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 Pfam PF02911 Formyl transferase, C-terminal domain 204 292 2.7E-16 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 Gene3D G3DSA:3.40.50.170 1 203 2.3E-67 T 14-10-2018 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 289 1.2E-73 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 Gene3D G3DSA:3.10.25.10 204 297 1.3E-10 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 SUPERFAMILY SSF50486 204 293 3.53E-14 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 295 29.104 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 SUPERFAMILY SSF53328 1 204 7.72E-57 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P029_03835 55afa7eab00c1308614acd7e3aeb5ad4 301 Pfam PF00551 Formyl transferase 1 181 1.5E-38 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 P029_02120 83ae2505909d934dc90682fcf87a4411 218 Gene3D G3DSA:3.20.20.70 1 216 1.0E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_02120 83ae2505909d934dc90682fcf87a4411 218 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 201 8.2E-55 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 P029_02120 83ae2505909d934dc90682fcf87a4411 218 SUPERFAMILY SSF51569 1 211 8.16E-73 T 14-10-2018 P029_02120 83ae2505909d934dc90682fcf87a4411 218 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 P029_02120 83ae2505909d934dc90682fcf87a4411 218 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 4.2E-81 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 P029_04895 ef358f230a1624cc91b4b4953d7b71da 295 Pfam PF01617 Surface antigen 114 293 2.2E-41 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04895 ef358f230a1624cc91b4b4953d7b71da 295 Gene3D G3DSA:2.40.160.20 159 289 1.7E-9 T 14-10-2018 P029_04895 ef358f230a1624cc91b4b4953d7b71da 295 SUPERFAMILY SSF56925 207 285 2.56E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 Gene3D G3DSA:3.40.50.300 3 216 2.6E-56 T 14-10-2018 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 SUPERFAMILY SSF52540 7 213 9.37E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 TIGRFAM TIGR01351 adk: adenylate kinase 7 211 5.0E-56 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 Pfam PF00406 Adenylate kinase 10 190 7.7E-37 T 14-10-2018 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 PRINTS PR00094 Adenylate kinase signature 85 101 1.1E-24 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 PRINTS PR00094 Adenylate kinase signature 9 22 1.1E-24 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 PRINTS PR00094 Adenylate kinase signature 161 176 1.1E-24 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 PRINTS PR00094 Adenylate kinase signature 38 52 1.1E-24 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 ProSitePatterns PS00113 Adenylate kinase signature. 85 96 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P029_01295 d5a11ab21599cb84cc22270b23428ab9 216 Hamap MF_00235 Adenylate kinase [adk]. 6 212 34.16 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 P029_02080 a8a395f23c3a25ae35fcc343e498c78b 277 PIRSF PIRSF035875 2 276 4.9E-52 T 14-10-2018 IPR017039 Virulence factor BrkB P029_02080 a8a395f23c3a25ae35fcc343e498c78b 277 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 270 1.8E-27 T 14-10-2018 IPR017039 Virulence factor BrkB P029_02080 a8a395f23c3a25ae35fcc343e498c78b 277 Pfam PF03631 Virulence factor BrkB 22 271 9.5E-50 T 14-10-2018 IPR017039 Virulence factor BrkB P029_01770 ab1dc9092a012484be2e531c19dff272 546 SUPERFAMILY SSF56935 82 492 2.81E-6 T 14-10-2018 P029_00770 bf2f528776e64b3e3063af16cefb3416 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00770 bf2f528776e64b3e3063af16cefb3416 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 228 242 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00770 bf2f528776e64b3e3063af16cefb3416 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 56 71 1.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 P029_00770 bf2f528776e64b3e3063af16cefb3416 286 Pfam PF12146 Serine aminopeptidase, S33 26 272 4.2E-15 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 P029_00770 bf2f528776e64b3e3063af16cefb3416 286 SUPERFAMILY SSF53474 5 285 1.77E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold P029_02805 e010d77baa3dcf81e93112ee2f1fac25 146 Gene3D G3DSA:1.10.287.110 4 80 5.8E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily P029_02805 e010d77baa3dcf81e93112ee2f1fac25 146 SUPERFAMILY SSF46565 4 73 3.79E-11 T 14-10-2018 IPR036869 Chaperone J-domain superfamily P029_02805 e010d77baa3dcf81e93112ee2f1fac25 146 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 16 92 3.5E-14 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 P029_04955 349eb653dfcd5355be84a9ebf384aff8 222 SUPERFAMILY SSF56925 97 213 3.66E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04955 349eb653dfcd5355be84a9ebf384aff8 222 Gene3D G3DSA:2.40.160.20 37 181 1.4E-9 T 14-10-2018 P029_04955 349eb653dfcd5355be84a9ebf384aff8 222 Pfam PF01617 Surface antigen 66 211 6.0E-46 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00365 1f0ca53d6ace15d011a4748461432d07 85 Gene3D G3DSA:3.30.160.190 1 63 1.1E-20 T 14-10-2018 IPR038532 NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00365 1f0ca53d6ace15d011a4748461432d07 85 Pfam PF04800 ETC complex I subunit conserved region 1 83 1.4E-23 T 14-10-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 41 64 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 SUPERFAMILY SSF53623 12 284 2.06E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 SUPERFAMILY SSF53244 303 427 8.47E-20 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 Gene3D G3DSA:3.40.1190.10 6 285 5.0E-88 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 133 148 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 PIRSF PIRSF001563 5 428 3.4E-116 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 Pfam PF08245 Mur ligase middle domain 43 259 1.1E-10 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 20 426 7.6E-115 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 P029_03070 442318b85bbd1bf2a67b960ed0108885 429 Gene3D G3DSA:3.90.190.20 297 428 3.6E-21 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 P029_03595 52110fa181f6052452476f0d54a57638 906 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 6 888 0.0 T 14-10-2018 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 486 1.2E-149 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_03595 52110fa181f6052452476f0d54a57638 906 SUPERFAMILY SSF101904 521 897 6.02E-93 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal P029_03595 52110fa181f6052452476f0d54a57638 906 Gene3D G3DSA:3.90.199.10 30 509 1.6E-205 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 P029_03595 52110fa181f6052452476f0d54a57638 906 Gene3D G3DSA:1.10.268.10 366 481 1.6E-205 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P029_03595 52110fa181f6052452476f0d54a57638 906 Gene3D G3DSA:2.120.10.90 518 747 3.5E-67 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal P029_03595 52110fa181f6052452476f0d54a57638 906 SUPERFAMILY SSF56719 27 509 4.71E-167 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 P029_03595 52110fa181f6052452476f0d54a57638 906 Gene3D G3DSA:2.120.10.90 751 888 2.9E-32 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal P029_03595 52110fa181f6052452476f0d54a57638 906 SMART SM00434 8 487 1.1E-244 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 P029_03595 52110fa181f6052452476f0d54a57638 906 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 889 22.77 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 P029_03595 52110fa181f6052452476f0d54a57638 906 Gene3D G3DSA:3.30.1360.40 233 329 1.6E-205 T 14-10-2018 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 791 836 2.2E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 577 625 3.1E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 527 572 6.2E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 638 681 0.01 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 841 887 1.3E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P029_03595 52110fa181f6052452476f0d54a57638 906 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 685 732 1.1E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 P029_01385 56a31a412464b6775b822adfbae680ab 141 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 138 38.278 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 P029_01385 56a31a412464b6775b822adfbae680ab 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 81 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 P029_01385 56a31a412464b6775b822adfbae680ab 141 Gene3D G3DSA:3.40.140.10 1 141 7.0E-48 T 14-10-2018 P029_01385 56a31a412464b6775b822adfbae680ab 141 Pfam PF14437 MafB19-like deaminase 4 138 5.6E-26 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 P029_01385 56a31a412464b6775b822adfbae680ab 141 SUPERFAMILY SSF53927 1 138 7.03E-45 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P029_02190 de407f88572fe88f1d87e011bf8a73de 225 SUPERFAMILY SSF56925 99 223 7.85E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_02875 f651f4c2d4e1aed1f17f09201bf96a86 99 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 98 1.8E-22 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02875 f651f4c2d4e1aed1f17f09201bf96a86 99 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 20.435 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02875 f651f4c2d4e1aed1f17f09201bf96a86 99 ProSitePatterns PS01169 Ribosomal protein L21 signature. 69 91 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_02875 f651f4c2d4e1aed1f17f09201bf96a86 99 SUPERFAMILY SSF141091 1 98 7.72E-30 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02875 f651f4c2d4e1aed1f17f09201bf96a86 99 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 1.1E-31 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_05115 7fdc1716ff0e4fffe1cc0a77e612c790 177 Pfam PF02441 Flavoprotein 1 172 2.2E-47 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 P029_05115 7fdc1716ff0e4fffe1cc0a77e612c790 177 Gene3D G3DSA:3.40.50.1950 1 177 5.2E-57 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P029_05115 7fdc1716ff0e4fffe1cc0a77e612c790 177 SUPERFAMILY SSF52507 1 174 2.75E-56 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:1.10.10.200 1 81 9.6E-30 T 14-10-2018 IPR017856 Integrase-like, N-terminal P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.70.980 133 210 2.1E-40 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 245 29.554 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 Gene3D G3DSA:3.30.70.980 84 239 2.1E-40 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 SUPERFAMILY SSF75625 3 244 4.71E-74 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 241 2.5E-74 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_02075 6f33547ea1b027a3da68af7b685d8f19 245 Pfam PF01709 Transcriptional regulator 5 239 5.9E-78 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04960 44aa835a292064a9f1c95904901a9236 391 Pfam PF01617 Surface antigen 27 387 3.8E-72 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04960 44aa835a292064a9f1c95904901a9236 391 SUPERFAMILY SSF56925 27 380 4.71E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04960 44aa835a292064a9f1c95904901a9236 391 Gene3D G3DSA:2.40.160.20 195 384 1.7E-9 T 14-10-2018 P029_05300 e1759d724059cab14279797c4722fddb 124 Gene3D G3DSA:1.10.1660.10 16 93 2.1E-18 T 14-10-2018 P029_05300 e1759d724059cab14279797c4722fddb 124 SUPERFAMILY SSF46955 22 120 4.58E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily P029_05300 e1759d724059cab14279797c4722fddb 124 Pfam PF13411 MerR HTH family regulatory protein 21 87 2.1E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P029_05300 e1759d724059cab14279797c4722fddb 124 SMART SM00422 20 89 6.4E-4 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 4.8E-13 T 14-10-2018 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 4.8E-13 T 14-10-2018 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.8E-13 T 14-10-2018 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.8E-13 T 14-10-2018 P029_03015 d32e626912f7e83f123914e94b92cefc 338 Gene3D G3DSA:3.50.50.60 127 250 4.0E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_03015 d32e626912f7e83f123914e94b92cefc 338 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 302 1.5E-22 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 SUPERFAMILY SSF51905 7 315 1.51E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_03015 d32e626912f7e83f123914e94b92cefc 338 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 40.223 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.0E-19 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 2.0E-19 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 206 222 2.0E-19 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 2.0E-19 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 2.0E-19 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 65 75 2.0E-19 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 P029_03015 d32e626912f7e83f123914e94b92cefc 338 Gene3D G3DSA:3.50.50.60 8 312 4.0E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_04020 864d5610ea7a7fdc1af96c2498c5afa6 459 Gene3D G3DSA:3.65.10.10 42 256 5.5E-49 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P029_04020 864d5610ea7a7fdc1af96c2498c5afa6 459 Gene3D G3DSA:3.65.10.10 257 432 5.5E-49 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 P029_04020 864d5610ea7a7fdc1af96c2498c5afa6 459 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 180 431 5.3E-17 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 P029_04020 864d5610ea7a7fdc1af96c2498c5afa6 459 SUPERFAMILY SSF55205 24 448 6.21E-37 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 P029_04340 1995ecc73b25bec5952f548fa1203005 262 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 255 2.7E-63 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 102 122 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 228 245 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 124 143 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 90 102 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 166 187 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 190 210 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 PRINTS PR01166 Cytochrome c oxidase subunit II signature 210 227 2.5E-46 T 14-10-2018 P029_04340 1995ecc73b25bec5952f548fa1203005 262 Gene3D G3DSA:2.60.40.420 125 259 4.9E-57 T 14-10-2018 IPR008972 Cupredoxin P029_04340 1995ecc73b25bec5952f548fa1203005 262 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 27 113 1.9E-17 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04340 1995ecc73b25bec5952f548fa1203005 262 SUPERFAMILY SSF81464 21 117 1.47E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04340 1995ecc73b25bec5952f548fa1203005 262 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 191 239 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04340 1995ecc73b25bec5952f548fa1203005 262 SUPERFAMILY SSF49503 124 259 4.65E-56 T 14-10-2018 IPR008972 Cupredoxin P029_04340 1995ecc73b25bec5952f548fa1203005 262 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 129 246 8.7E-53 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04340 1995ecc73b25bec5952f548fa1203005 262 Gene3D G3DSA:1.10.287.90 26 124 3.9E-28 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04255 908e089def82ebfef63de79181156778 369 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 155 361 1.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P029_04255 908e089def82ebfef63de79181156778 369 Gene3D G3DSA:1.10.3720.10 135 365 8.9E-36 T 14-10-2018 IPR035906 MetI-like superfamily P029_04255 908e089def82ebfef63de79181156778 369 SUPERFAMILY SSF161098 113 356 1.11E-32 T 14-10-2018 IPR035906 MetI-like superfamily P029_04255 908e089def82ebfef63de79181156778 369 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 73 363 8.7E-76 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 P029_01305 b00addddd44dc2a40ef17b5189d3adba 124 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 5 121 1.2E-50 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01305 b00addddd44dc2a40ef17b5189d3adba 124 PIRSF PIRSF002131 1 124 3.2E-43 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 P029_01305 b00addddd44dc2a40ef17b5189d3adba 124 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 124 28.633 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 P029_01305 b00addddd44dc2a40ef17b5189d3adba 124 SUPERFAMILY SSF53137 7 124 2.03E-39 T 14-10-2018 P029_01305 b00addddd44dc2a40ef17b5189d3adba 124 Gene3D G3DSA:3.30.420.80 1 124 1.4E-42 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 P029_01305 b00addddd44dc2a40ef17b5189d3adba 124 Pfam PF00411 Ribosomal protein S11 13 123 2.5E-38 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 P029_04765 4d7fd0f4441c871aed44137fbe8ad0b4 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 93 108 1.7E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P029_04765 4d7fd0f4441c871aed44137fbe8ad0b4 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 129 145 1.7E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P029_04765 4d7fd0f4441c871aed44137fbe8ad0b4 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 1.7E-14 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P029_04765 4d7fd0f4441c871aed44137fbe8ad0b4 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 2 154 14.149 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P029_04765 4d7fd0f4441c871aed44137fbe8ad0b4 156 TIGRFAM TIGR00077 lspA: signal peptidase II 10 150 2.0E-28 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P029_04765 4d7fd0f4441c871aed44137fbe8ad0b4 156 Pfam PF01252 Signal peptidase (SPase) II 12 146 3.1E-31 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 Pfam PF00366 Ribosomal protein S17 8 74 5.4E-22 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 6.0E-26 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 74 4.4E-27 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 7.3E-7 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 7.3E-7 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 7.3E-7 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 76 18.695 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 SUPERFAMILY SSF50249 5 75 1.03E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01240 e8fcb63432d5aa301d8b40421cdf1eeb 76 Gene3D G3DSA:2.40.50.140 1 76 5.9E-23 T 14-10-2018 P029_05270 65598b977008e97163ebf362798194a5 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 162 31.212 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P029_05270 65598b977008e97163ebf362798194a5 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 160 5.3E-58 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P029_05270 65598b977008e97163ebf362798194a5 163 Gene3D G3DSA:3.30.1330.50 2 163 2.9E-61 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P029_05270 65598b977008e97163ebf362798194a5 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 41 56 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P029_05270 65598b977008e97163ebf362798194a5 163 SUPERFAMILY SSF69765 1 162 2.22E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P029_05270 65598b977008e97163ebf362798194a5 163 Pfam PF02542 YgbB family 3 159 8.0E-57 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 14-10-2018 IPR018215 ClpP, Ser active site P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 Pfam PF00574 Clp protease 13 192 3.2E-85 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 SUPERFAMILY SSF52096 10 192 1.8E-71 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.578 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 Gene3D G3DSA:3.90.226.10 1 195 2.7E-82 T 14-10-2018 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 9.0E-99 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.1E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.1E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.1E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.1E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_03855 ef930fb5aec45da9e2d8636352e6b9eb 197 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.1E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 P029_01195 646f0931dfa442211c8a534f9cc2bce8 228 Pfam PF00297 Ribosomal protein L3 103 186 9.8E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01195 646f0931dfa442211c8a534f9cc2bce8 228 SUPERFAMILY SSF50447 5 217 6.53E-63 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_01195 646f0931dfa442211c8a534f9cc2bce8 228 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 209 1.2E-69 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01195 646f0931dfa442211c8a534f9cc2bce8 228 Gene3D G3DSA:2.40.30.10 123 215 3.4E-16 T 14-10-2018 P029_01195 646f0931dfa442211c8a534f9cc2bce8 228 ProSitePatterns PS00474 Ribosomal protein L3 signature. 105 128 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 SUPERFAMILY SSF52402 332 597 2.12E-69 T 14-10-2018 P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 Pfam PF02540 NAD synthase 333 589 5.0E-66 T 14-10-2018 IPR022310 NAD/GMP synthase P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 PIRSF PIRSF006630 109 600 3.1E-98 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 PIRSF PIRSF006630 1 106 1.1E-5 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 SUPERFAMILY SSF56317 3 218 1.54E-6 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 Gene3D G3DSA:3.60.110.10 2 240 5.5E-12 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 Gene3D G3DSA:3.40.50.620 331 600 7.5E-92 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_03465 1cf5392e3a29fe3337ee1e15a277a8c1 600 TIGRFAM TIGR00552 nadE: NAD+ synthetase 340 591 4.7E-58 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 Gene3D G3DSA:3.50.50.60 10 334 2.5E-72 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_00045 168ef5f074d079528d62d14ae2be77e7 392 Gene3D G3DSA:3.30.9.50 79 265 2.5E-72 T 14-10-2018 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 Pfam PF01494 FAD binding domain 149 309 2.9E-12 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 290 303 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 8.5E-14 T 14-10-2018 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 8.5E-14 T 14-10-2018 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 8.5E-14 T 14-10-2018 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 8.5E-14 T 14-10-2018 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 10 386 4.7E-98 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 P029_00045 168ef5f074d079528d62d14ae2be77e7 392 SUPERFAMILY SSF51905 9 388 3.35E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_03740 02b0da9603a9b1ccfd7fd043628412ba 370 Pfam PF02481 DNA recombination-mediator protein A 69 276 1.4E-70 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 P029_03740 02b0da9603a9b1ccfd7fd043628412ba 370 SUPERFAMILY SSF102405 80 285 3.2E-35 T 14-10-2018 P029_03740 02b0da9603a9b1ccfd7fd043628412ba 370 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 67 283 7.0E-67 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 P029_03740 02b0da9603a9b1ccfd7fd043628412ba 370 Gene3D G3DSA:3.40.50.450 1 286 4.0E-97 T 14-10-2018 P029_03740 02b0da9603a9b1ccfd7fd043628412ba 370 Gene3D G3DSA:1.10.10.10 292 365 1.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily P029_05385 d48aaff5da20e7204fff4c808abc6011 360 SUPERFAMILY SSF56925 39 349 1.29E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05385 d48aaff5da20e7204fff4c808abc6011 360 Pfam PF01617 Surface antigen 39 352 1.4E-49 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02790 049247ffc491535c95a2fddbba4c3595 412 Gene3D G3DSA:3.90.1150.10 13 383 7.7E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_02790 049247ffc491535c95a2fddbba4c3595 412 Pfam PF00266 Aminotransferase class-V 13 377 8.0E-80 T 14-10-2018 IPR000192 Aminotransferase class V domain P029_02790 049247ffc491535c95a2fddbba4c3595 412 Gene3D G3DSA:3.40.640.10 24 270 7.7E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_02790 049247ffc491535c95a2fddbba4c3595 412 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 10 411 2.2E-194 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 P029_02790 049247ffc491535c95a2fddbba4c3595 412 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 9 404 53.111 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 P029_02790 049247ffc491535c95a2fddbba4c3595 412 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 204 223 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site P029_02790 049247ffc491535c95a2fddbba4c3595 412 PIRSF PIRSF005572 10 393 1.1E-126 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 P029_02790 049247ffc491535c95a2fddbba4c3595 412 SUPERFAMILY SSF53383 13 387 2.42E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_01545 ba70d8079d30a14152472e137e7bef12 288 Gene3D G3DSA:3.40.50.880 49 267 6.8E-15 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_01545 ba70d8079d30a14152472e137e7bef12 288 Pfam PF07722 Peptidase C26 106 255 8.7E-8 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 P029_01545 ba70d8079d30a14152472e137e7bef12 288 SUPERFAMILY SSF52317 58 257 3.82E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 Gene3D G3DSA:3.40.50.1470 1 181 2.7E-54 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 173 2.5E-45 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 SUPERFAMILY SSF53178 2 179 2.09E-53 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 Pfam PF01195 Peptidyl-tRNA hydrolase 3 170 5.5E-48 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P029_05140 4e63b2d26d6a7a9971ed612a86e6e411 183 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 174 30.627 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P029_04920 2baaea4982b7eded7c64e9582d9ead25 145 SUPERFAMILY SSF54637 2 143 7.31E-43 T 14-10-2018 IPR029069 HotDog domain superfamily P029_04920 2baaea4982b7eded7c64e9582d9ead25 145 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 143 1.8E-51 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P029_04920 2baaea4982b7eded7c64e9582d9ead25 145 Pfam PF07977 FabA-like domain 12 137 1.2E-31 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P029_04920 2baaea4982b7eded7c64e9582d9ead25 145 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 3 145 31.601 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P029_04920 2baaea4982b7eded7c64e9582d9ead25 145 Gene3D G3DSA:3.10.129.10 1 145 5.7E-57 T 14-10-2018 P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 SUPERFAMILY SSF55048 128 196 4.97E-13 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 Gene3D G3DSA:3.30.70.250 125 198 2.5E-91 T 14-10-2018 P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 SUPERFAMILY SSF52151 1 306 1.41E-69 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 2.6E-80 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 Pfam PF00698 Acyl transferase domain 2 290 2.1E-32 T 14-10-2018 IPR014043 Acyl transferase P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 PIRSF PIRSF000446 1 309 3.1E-79 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 1 304 1.1E-38 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain P029_00435 c1c0292c62f3a9e283cc8ca68d26c362 315 Gene3D G3DSA:3.40.366.10 1 285 2.5E-91 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 P029_03195 5b4bec254a95fae91ba3544710d5dda3 223 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 196 17.69 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 P029_03195 5b4bec254a95fae91ba3544710d5dda3 223 Pfam PF01121 Dephospho-CoA kinase 3 178 4.4E-24 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 P029_03195 5b4bec254a95fae91ba3544710d5dda3 223 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 180 6.8E-24 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 P029_03195 5b4bec254a95fae91ba3544710d5dda3 223 SUPERFAMILY SSF52540 1 193 2.36E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03195 5b4bec254a95fae91ba3544710d5dda3 223 Gene3D G3DSA:3.40.50.300 1 201 2.0E-39 T 14-10-2018 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 51 89 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 SUPERFAMILY SSF53927 4 141 6.38E-44 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 Gene3D G3DSA:3.40.140.10 2 140 3.1E-43 T 14-10-2018 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 SUPERFAMILY SSF53597 148 349 1.31E-46 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 Pfam PF01872 RibD C-terminal domain 148 322 2.6E-33 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 321 1.4E-92 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 1.6E-18 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 Gene3D G3DSA:3.40.430.10 141 351 6.9E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 P029_00160 ba1997ac2e1c4c5b8c8858256b8cdb9c 359 PIRSF PIRSF006769 1 357 1.6E-116 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 P029_05600 eb871416724551805ece82d23bf0544a 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 435 2.3E-156 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 P029_05600 eb871416724551805ece82d23bf0544a 497 Gene3D G3DSA:3.40.1670.10 342 459 1.8E-45 T 14-10-2018 P029_05600 eb871416724551805ece82d23bf0544a 497 SUPERFAMILY SSF50475 3 327 1.41E-110 T 14-10-2018 P029_05600 eb871416724551805ece82d23bf0544a 497 SUPERFAMILY SSF143968 328 492 5.75E-63 T 14-10-2018 P029_05600 eb871416724551805ece82d23bf0544a 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 460 3.5E-147 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 P029_05490 33cca94ea782cd70840f378ecbf2917b 184 SUPERFAMILY SSF47928 12 104 6.41E-11 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05490 33cca94ea782cd70840f378ecbf2917b 184 Gene3D G3DSA:1.10.520.20 10 99 7.0E-5 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05490 33cca94ea782cd70840f378ecbf2917b 184 Pfam PF00213 ATP synthase delta (OSCP) subunit 12 175 2.9E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_05490 33cca94ea782cd70840f378ecbf2917b 184 Hamap MF_01416 ATP synthase subunit delta [atpD]. 5 179 13.356 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_03270 dcb9d770ba12c2178c2de3d148dd0c66 151 SUPERFAMILY SSF89360 9 140 3.73E-18 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P029_03270 dcb9d770ba12c2178c2de3d148dd0c66 151 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 150 5.0E-17 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 P029_03270 dcb9d770ba12c2178c2de3d148dd0c66 151 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 147 3.7E-7 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 P029_03270 dcb9d770ba12c2178c2de3d148dd0c66 151 Gene3D G3DSA:2.60.300.12 8 151 3.0E-23 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 Pfam PF01218 Coproporphyrinogen III oxidase 9 273 1.7E-97 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 Gene3D G3DSA:3.40.1500.10 1 274 3.7E-104 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 SUPERFAMILY SSF102886 3 273 9.02E-108 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 PIRSF PIRSF000166 1 274 2.1E-109 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 PRINTS PR00073 Coprogen oxidase signature 123 145 5.1E-43 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 PRINTS PR00073 Coprogen oxidase signature 160 189 5.1E-43 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 PRINTS PR00073 Coprogen oxidase signature 231 258 5.1E-43 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 PRINTS PR00073 Coprogen oxidase signature 259 274 5.1E-43 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01835 a8ff29c872f275897b8f57a7ec22c572 274 PRINTS PR00073 Coprogen oxidase signature 35 51 5.1E-43 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 8 228 1.7E-93 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 Pfam PF00318 Ribosomal protein S2 12 228 2.2E-89 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 SUPERFAMILY SSF52313 9 231 2.09E-87 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 Gene3D G3DSA:3.40.50.10490 12 222 7.6E-84 T 14-10-2018 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 9 20 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 PRINTS PR00395 Ribosomal protein S2 signature 9 27 2.2E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 PRINTS PR00395 Ribosomal protein S2 signature 162 179 2.2E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 PRINTS PR00395 Ribosomal protein S2 signature 179 190 2.2E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 PRINTS PR00395 Ribosomal protein S2 signature 92 109 2.2E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 PRINTS PR00395 Ribosomal protein S2 signature 200 214 2.2E-34 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 5 246 39.096 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 162 186 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 P029_01730 07e0a1f120269075c2e1c7a1b9698979 296 Gene3D G3DSA:1.10.287.610 108 154 7.6E-84 T 14-10-2018 P029_02215 520cf81dad01c0275ba9581c86f48bbe 111 SUPERFAMILY SSF47413 11 81 5.63E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 P029_02215 520cf81dad01c0275ba9581c86f48bbe 111 Pfam PF13744 Helix-turn-helix domain 11 77 4.1E-16 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain P029_02215 520cf81dad01c0275ba9581c86f48bbe 111 Gene3D G3DSA:1.10.260.40 8 68 2.2E-17 T 14-10-2018 P029_04560 763cc93764b75ded49212b0172d5b216 123 Pfam PF04956 TrbC/VIRB2 family 14 101 3.2E-17 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 SUPERFAMILY SSF52922 536 664 4.43E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 Gene3D G3DSA:3.40.50.920 538 662 9.2E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 Pfam PF02780 Transketolase, C-terminal domain 551 654 1.6E-7 T 14-10-2018 IPR033248 Transketolase, C-terminal domain P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 SUPERFAMILY SSF52518 350 525 1.03E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 Pfam PF02779 Transketolase, pyrimidine binding domain 355 524 5.2E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 SUPERFAMILY SSF52518 11 314 5.66E-107 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 Gene3D G3DSA:3.40.50.970 11 330 7.6E-111 T 14-10-2018 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 SMART SM00861 354 526 2.1E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 17 659 3.1E-233 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 17 320 3.8E-117 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 Gene3D G3DSA:3.40.50.970 332 531 5.6E-72 T 14-10-2018 P029_01460 904cee37b7125ccffe0a1c48d2d53b0b 667 ProSitePatterns PS00801 Transketolase signature 1. 23 43 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P029_00445 6b27b940f4df699f9d8b5ee735508393 391 Gene3D G3DSA:1.20.1250.20 181 391 4.3E-12 T 14-10-2018 P029_00445 6b27b940f4df699f9d8b5ee735508393 391 Pfam PF07690 Major Facilitator Superfamily 5 329 1.4E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P029_00445 6b27b940f4df699f9d8b5ee735508393 391 Gene3D G3DSA:1.20.1250.20 1 177 7.7E-20 T 14-10-2018 P029_00445 6b27b940f4df699f9d8b5ee735508393 391 SUPERFAMILY SSF103473 2 387 4.19E-39 T 14-10-2018 IPR036259 MFS transporter superfamily P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 SUPERFAMILY SSF53335 10 277 3.12E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 28 276 3.9E-66 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 Gene3D G3DSA:3.40.50.150 89 281 4.2E-47 T 14-10-2018 P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 Gene3D G3DSA:1.10.8.10 5 88 5.3E-19 T 14-10-2018 P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 185 191 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 Pfam PF05175 Methyltransferase small domain 115 193 3.9E-10 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 P029_04885 be6d84b2bbc686d757c8d04933e6489d 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 13 257 3.5E-52 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Pfam PF08529 NusA N-terminal domain 11 144 8.0E-19 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SMART SM00322 323 384 0.28 T 14-10-2018 IPR004087 K Homology domain GO:0003676 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SMART SM00322 249 322 0.003 T 14-10-2018 IPR004087 K Homology domain GO:0003676 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 448 25.565 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Gene3D G3DSA:2.40.50.140 155 217 6.5E-18 T 14-10-2018 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SUPERFAMILY SSF69705 9 145 8.37E-23 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 12 358 5.9E-105 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 384 431 4.9E-15 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Gene3D G3DSA:3.30.1480.10 8 145 7.4E-17 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SUPERFAMILY SSF54814 298 360 1.5E-14 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SMART SM00316 153 219 3.0E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SUPERFAMILY SSF47794 448 511 2.94E-6 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Pfam PF14520 Helix-hairpin-helix domain 451 509 4.6E-6 T 14-10-2018 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Gene3D G3DSA:1.10.150.20 373 438 3.1E-15 T 14-10-2018 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SUPERFAMILY SSF47794 375 433 1.55E-10 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Gene3D G3DSA:3.30.300.20 218 296 1.1E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Pfam PF13184 NusA-like KH domain 249 317 3.0E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 Gene3D G3DSA:3.30.300.20 297 366 4.8E-22 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SUPERFAMILY SSF54814 221 296 9.16E-27 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 P029_01935 1bd6e8bcf02001f9bb6735a9d42e6563 514 SUPERFAMILY SSF50249 151 218 5.24E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01110 8e658cabc96a53a6c616050b9c1486f5 359 Gene3D G3DSA:3.40.50.300 39 205 1.4E-18 T 14-10-2018 P029_01110 8e658cabc96a53a6c616050b9c1486f5 359 Pfam PF03969 AFG1-like ATPase 42 359 1.1E-74 T 14-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 P029_01110 8e658cabc96a53a6c616050b9c1486f5 359 SUPERFAMILY SSF52540 28 173 7.63E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01535 78c30b576cee7da14c952debf20a8916 569 SUPERFAMILY SSF55920 285 535 7.33E-59 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like P029_01535 78c30b576cee7da14c952debf20a8916 569 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 122 2.4E-10 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 P029_01535 78c30b576cee7da14c952debf20a8916 569 Gene3D G3DSA:3.40.350.10 1 138 3.8E-27 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal P029_01535 78c30b576cee7da14c952debf20a8916 569 Pfam PF16188 C-terminal region of peptidase_M24 510 569 7.3E-20 T 14-10-2018 IPR032416 Peptidase M24, C-terminal domain P029_01535 78c30b576cee7da14c952debf20a8916 569 SUPERFAMILY SSF53092 1 122 1.74E-7 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal P029_01535 78c30b576cee7da14c952debf20a8916 569 Pfam PF00557 Metallopeptidase family M24 291 503 3.0E-44 T 14-10-2018 IPR000994 Peptidase M24 P029_01535 78c30b576cee7da14c952debf20a8916 569 Pfam PF16189 Creatinase/Prolidase N-terminal domain 139 288 4.4E-26 T 14-10-2018 P029_01535 78c30b576cee7da14c952debf20a8916 569 Gene3D G3DSA:3.90.230.10 282 569 1.0E-94 T 14-10-2018 P029_01535 78c30b576cee7da14c952debf20a8916 569 Gene3D G3DSA:3.40.350.10 139 270 3.7E-15 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal P029_00450 a1e8a4c7f1c4cd33b8fcac058fc26a75 215 PIRSF PIRSF031890 1 215 2.6E-60 T 14-10-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related P029_00450 a1e8a4c7f1c4cd33b8fcac058fc26a75 215 Gene3D G3DSA:3.10.450.240 54 214 7.8E-29 T 14-10-2018 P029_00450 a1e8a4c7f1c4cd33b8fcac058fc26a75 215 SUPERFAMILY SSF54427 68 214 1.32E-38 T 14-10-2018 IPR032710 NTF2-like domain superfamily P029_00450 a1e8a4c7f1c4cd33b8fcac058fc26a75 215 ProDom PD111165 RP434 54 212 0.004 T 14-10-2018 P029_00450 a1e8a4c7f1c4cd33b8fcac058fc26a75 215 SMART SM00978 70 214 3.0E-35 T 14-10-2018 IPR007379 Tim44-like domain P029_00450 a1e8a4c7f1c4cd33b8fcac058fc26a75 215 Pfam PF04280 Tim44-like domain 73 214 2.7E-33 T 14-10-2018 IPR007379 Tim44-like domain P029_05475 d94a18b02fa560e695184d13dd289097 209 Gene3D G3DSA:3.90.870.10 3 209 3.0E-74 T 14-10-2018 P029_05475 d94a18b02fa560e695184d13dd289097 209 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 14 205 1.6E-69 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_05475 d94a18b02fa560e695184d13dd289097 209 SUPERFAMILY SSF55821 8 206 9.39E-74 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily P029_05475 d94a18b02fa560e695184d13dd289097 209 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 205 1.5E-61 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_02210 cf406701fc4e39ed8a5677f4da8121c5 135 SUPERFAMILY SSF63562 14 73 1.64E-13 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P029_02210 cf406701fc4e39ed8a5677f4da8121c5 135 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 14 57 3.0E-8 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_02210 cf406701fc4e39ed8a5677f4da8121c5 135 Pfam PF01192 RNA polymerase Rpb6 14 59 3.3E-9 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P029_02210 cf406701fc4e39ed8a5677f4da8121c5 135 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 12.88 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 P029_02210 cf406701fc4e39ed8a5677f4da8121c5 135 SMART SM01409 7 60 8.0E-10 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P029_02210 cf406701fc4e39ed8a5677f4da8121c5 135 Gene3D G3DSA:3.90.940.10 10 78 1.2E-13 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 164 8.7E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 22 52 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 10 164 2.5E-50 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 PIRSF PIRSF006092 5 165 9.4E-43 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 SUPERFAMILY SSF46557 8 80 1.83E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 Gene3D G3DSA:3.10.50.30 80 166 9.5E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 Pfam PF03449 Transcription elongation factor, N-terminal 10 78 2.6E-28 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 Hamap MF_00105 Transcription elongation factor GreA [greA]. 7 164 27.839 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 SUPERFAMILY SSF54534 85 165 1.44E-17 T 14-10-2018 P029_05480 a073d7e164730260d25d54ef7a10d9b2 166 Gene3D G3DSA:1.10.287.180 7 79 2.1E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 SUPERFAMILY SSF47973 2 153 1.1E-46 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 Gene3D G3DSA:1.10.455.10 2 160 6.4E-48 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 PIRSF PIRSF002122 9 160 4.8E-49 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 160 29.933 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 159 1.1E-51 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 P029_04170 07562a5d7e27b0ebc23db161aed3848b 160 Pfam PF00177 Ribosomal protein S7p/S5e 1 153 1.2E-50 T 14-10-2018 IPR023798 Ribosomal protein S7 domain P029_00320 49d94a6f1e09c5449334fa10243cc2d4 261 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 1.7E-94 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 P029_00320 49d94a6f1e09c5449334fa10243cc2d4 261 SUPERFAMILY SSF110399 2 241 9.94E-77 T 14-10-2018 P029_00320 49d94a6f1e09c5449334fa10243cc2d4 261 Gene3D G3DSA:3.20.20.70 1 261 1.4E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 Pfam PF01018 GTP1/OBG 4 158 9.2E-56 T 14-10-2018 IPR006169 GTP1/OBG domain P029_02865 74099ce1939d48ad6a75df82affd5e69 352 Pfam PF01926 50S ribosome-binding GTPase 161 280 2.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 Gene3D G3DSA:2.70.210.12 1 158 4.0E-56 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily P029_02865 74099ce1939d48ad6a75df82affd5e69 352 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 161 309 4.3E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 SUPERFAMILY SSF52540 154 308 1.02E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02865 74099ce1939d48ad6a75df82affd5e69 352 Gene3D G3DSA:3.40.50.300 160 348 1.4E-45 T 14-10-2018 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 SUPERFAMILY SSF82051 3 158 1.7E-52 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily P029_02865 74099ce1939d48ad6a75df82affd5e69 352 PIRSF PIRSF002401 1 349 2.8E-126 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type P029_02865 74099ce1939d48ad6a75df82affd5e69 352 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 8.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 8.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 309 5.2E-131 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 P029_02865 74099ce1939d48ad6a75df82affd5e69 352 Hamap MF_01454 GTPase Obg [obg]. 2 325 43.944 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 P029_05770 583428185d8a7b42e6e2b5f065d13d29 137 Pfam PF01617 Surface antigen 72 133 3.6E-16 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00735 fef836bc845b967cab40ab5df094e8e1 218 ProSitePatterns PS00856 Guanylate kinase-like signature. 49 66 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 P029_00735 fef836bc845b967cab40ab5df094e8e1 218 Pfam PF00625 Guanylate kinase 17 195 2.4E-43 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit P029_00735 fef836bc845b967cab40ab5df094e8e1 218 SMART SM00072 13 197 4.4E-49 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit P029_00735 fef836bc845b967cab40ab5df094e8e1 218 Hamap MF_00328 Guanylate kinase [gmk]. 12 197 32.517 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 P029_00735 fef836bc845b967cab40ab5df094e8e1 218 SUPERFAMILY SSF52540 14 200 8.08E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00735 fef836bc845b967cab40ab5df094e8e1 218 Gene3D G3DSA:3.30.63.10 46 105 1.1E-61 T 14-10-2018 P029_00735 fef836bc845b967cab40ab5df094e8e1 218 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 15 194 3.5E-64 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 P029_00735 fef836bc845b967cab40ab5df094e8e1 218 Gene3D G3DSA:3.40.50.300 14 200 1.1E-61 T 14-10-2018 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Gene3D G3DSA:2.30.22.10 151 207 1.8E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 SUPERFAMILY SSF51064 152 207 2.35E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Hamap MF_01151 Protein GrpE [grpE]. 2 207 16.246 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Gene3D G3DSA:3.90.20.20 48 150 4.6E-14 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 SUPERFAMILY SSF58014 63 151 2.88E-18 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 Pfam PF01025 GrpE 54 206 8.6E-44 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 80 96 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 186 205 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 108 123 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P029_00155 b88367b9c1ab7f63bac2203ab3cfbc0b 211 PRINTS PR00773 GrpE protein signature 159 174 1.2E-16 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 SUPERFAMILY SSF51735 1 122 4.5E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_04240 180290e0e114ee2003bf3d66fc68083d 295 Pfam PF02629 CoA binding domain 6 99 7.4E-33 T 14-10-2018 IPR003781 CoA-binding GO:0048037 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 SMART SM00881 4 100 2.2E-37 T 14-10-2018 IPR003781 CoA-binding GO:0048037 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 1.4E-136 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 Pfam PF00549 CoA-ligase 151 272 1.8E-18 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.7E-34 T 14-10-2018 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 2.7E-34 T 14-10-2018 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.7E-34 T 14-10-2018 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.7E-34 T 14-10-2018 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 Gene3D G3DSA:3.40.50.261 124 290 6.4E-68 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 289 41.472 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 PIRSF PIRSF001553 1 292 5.5E-127 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site P029_04240 180290e0e114ee2003bf3d66fc68083d 295 SUPERFAMILY SSF52210 123 289 1.27E-50 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 Gene3D G3DSA:3.40.50.720 1 123 7.6E-53 T 14-10-2018 P029_04240 180290e0e114ee2003bf3d66fc68083d 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site P029_03770 f987c559752a67053a09e4380c5c823e 470 SUPERFAMILY SSF55874 292 460 6.16E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_03770 f987c559752a67053a09e4380c5c823e 470 SMART SM00388 234 303 1.1E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P029_03770 f987c559752a67053a09e4380c5c823e 470 SUPERFAMILY SSF47384 220 304 1.63E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 P029_03770 f987c559752a67053a09e4380c5c823e 470 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 302 4.1E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 P029_03770 f987c559752a67053a09e4380c5c823e 470 Gene3D G3DSA:1.10.287.130 202 301 8.1E-27 T 14-10-2018 P029_03770 f987c559752a67053a09e4380c5c823e 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 458 7.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_03770 f987c559752a67053a09e4380c5c823e 470 Gene3D G3DSA:3.30.565.10 303 458 1.7E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily P029_03770 f987c559752a67053a09e4380c5c823e 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_03770 f987c559752a67053a09e4380c5c823e 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_03770 f987c559752a67053a09e4380c5c823e 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 6.9E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 P029_03770 f987c559752a67053a09e4380c5c823e 470 SMART SM00387 349 461 9.3E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase P029_01795 511b33c67e88f1e91e98ad0df4759133 268 Gene3D G3DSA:3.20.190.10 1 130 2.7E-35 T 14-10-2018 IPR035937 MutM-like, N-terminal P029_01795 511b33c67e88f1e91e98ad0df4759133 268 SUPERFAMILY SSF46946 131 220 4.32E-24 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.5E-32 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 SMART SM00898 2 116 3.2E-40 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 217 2.2E-21 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 Gene3D G3DSA:1.10.8.50 132 268 2.1E-43 T 14-10-2018 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 SMART SM01232 130 220 4.2E-38 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 Pfam PF06827 Zinc finger found in FPG and IleRS 240 268 2.8E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 SUPERFAMILY SSF57716 216 268 5.13E-15 T 14-10-2018 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 P029_01795 511b33c67e88f1e91e98ad0df4759133 268 SUPERFAMILY SSF81624 2 139 3.66E-35 T 14-10-2018 IPR035937 MutM-like, N-terminal P029_01795 511b33c67e88f1e91e98ad0df4759133 268 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 267 1.0E-81 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 P029_00660 521de071ba4b5e52960b39706acf9efd 425 Gene3D G3DSA:3.90.1150.10 12 395 9.1E-175 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_00660 521de071ba4b5e52960b39706acf9efd 425 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 224 240 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P029_00660 521de071ba4b5e52960b39706acf9efd 425 PIRSF PIRSF000412 5 418 5.7E-163 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P029_00660 521de071ba4b5e52960b39706acf9efd 425 Pfam PF00464 Serine hydroxymethyltransferase 10 386 7.2E-162 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P029_00660 521de071ba4b5e52960b39706acf9efd 425 SUPERFAMILY SSF53383 10 416 3.24E-166 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_00660 521de071ba4b5e52960b39706acf9efd 425 Gene3D G3DSA:3.40.640.10 39 290 9.1E-175 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_00660 521de071ba4b5e52960b39706acf9efd 425 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 9 422 49.61 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 SMART SM01192 145 429 9.0E-186 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 10 421 1.1E-186 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 SUPERFAMILY SSF54826 9 143 1.43E-50 T 14-10-2018 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PRINTS PR00148 Enolase signature 367 384 3.9E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PRINTS PR00148 Enolase signature 338 352 3.9E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PRINTS PR00148 Enolase signature 43 57 3.9E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PRINTS PR00148 Enolase signature 315 326 3.9E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PRINTS PR00148 Enolase signature 167 180 3.9E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PRINTS PR00148 Enolase signature 113 129 3.9E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 Hamap MF_00318 Enolase [eno]. 8 415 42.495 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 PIRSF PIRSF001400 6 428 3.7E-179 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 SUPERFAMILY SSF51604 146 423 5.8E-116 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 SMART SM01193 10 140 2.2E-80 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 Gene3D G3DSA:3.20.20.120 135 426 2.3E-124 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 148 421 1.6E-112 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 Pfam PF03952 Enolase, N-terminal domain 10 140 8.7E-54 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_02870 1f6c1e86decfffa8d70087a4d230b450 429 Gene3D G3DSA:3.30.390.10 7 132 1.7E-49 T 14-10-2018 IPR029017 Enolase-like, N-terminal P029_01555 8b98203948e03bf6e301c4e036ab1f32 103 Gene3D G3DSA:2.30.170.40 8 102 6.0E-26 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01555 8b98203948e03bf6e301c4e036ab1f32 103 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 58 4.8E-18 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01555 8b98203948e03bf6e301c4e036ab1f32 103 SUPERFAMILY SSF143800 2 76 7.85E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01555 8b98203948e03bf6e301c4e036ab1f32 103 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 17.961 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01555 8b98203948e03bf6e301c4e036ab1f32 103 Pfam PF00830 Ribosomal L28 family 3 60 3.3E-22 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_03120 f3912274135df1ce0375e4ad4bd5ffe7 473 Gene3D G3DSA:3.30.420.240 296 454 1.9E-5 T 14-10-2018 P029_03120 f3912274135df1ce0375e4ad4bd5ffe7 473 Pfam PF17289 Terminase RNaseH-like domain 311 451 5.6E-11 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like P029_03120 f3912274135df1ce0375e4ad4bd5ffe7 473 TIGRFAM TIGR01630 psiM2_ORF9: phage uncharacterized protein, C-terminal domain 332 451 3.6E-16 T 14-10-2018 IPR006517 Archaeophage PsiM2, terminase large subunit P029_01325 65f7be75a17c8f4bc8ce0493067a936a 670 Pfam PF03772 Competence protein 206 476 5.7E-55 T 14-10-2018 IPR004477 ComEC/Rec2-related protein P029_01325 65f7be75a17c8f4bc8ce0493067a936a 670 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 227 412 1.4E-27 T 14-10-2018 IPR004477 ComEC/Rec2-related protein P029_01325 65f7be75a17c8f4bc8ce0493067a936a 670 Pfam PF13567 Domain of unknown function (DUF4131) 13 164 7.3E-14 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 P029_05185 12fb4bfe33d807cbc907f847e819bfea 141 Gene3D G3DSA:2.40.160.20 5 131 4.7E-10 T 14-10-2018 P029_05185 12fb4bfe33d807cbc907f847e819bfea 141 SUPERFAMILY SSF56925 46 126 5.76E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05185 12fb4bfe33d807cbc907f847e819bfea 141 Pfam PF01617 Surface antigen 22 137 3.5E-40 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01635 c33e3d02d87f6a185be04732eeee78fe 206 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 9 204 4.5E-57 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 P029_01635 c33e3d02d87f6a185be04732eeee78fe 206 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 9 204 2.0E-67 T 14-10-2018 IPR011740 Protein of unknown function DUF2460 P029_02195 0f152e03cca60ae9a2c131a286665a76 42 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02195 0f152e03cca60ae9a2c131a286665a76 42 Pfam PF00444 Ribosomal protein L36 2 41 1.4E-16 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02195 0f152e03cca60ae9a2c131a286665a76 42 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 16 41 0.008 T 14-10-2018 P029_02195 0f152e03cca60ae9a2c131a286665a76 42 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.4E-8 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02195 0f152e03cca60ae9a2c131a286665a76 42 SUPERFAMILY SSF57840 6 41 5.36E-13 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02195 0f152e03cca60ae9a2c131a286665a76 42 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.367 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04905 5c99618992fe1387480ad761b2507449 436 SUPERFAMILY SSF81442 8 426 2.75E-39 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04905 5c99618992fe1387480ad761b2507449 436 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 390 1.8E-11 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04905 5c99618992fe1387480ad761b2507449 436 Gene3D G3DSA:1.20.210.10 2 435 9.2E-33 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_01595 0c0c8d527ace6a83a2842578a48d5c8f 415 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 172 410 8.3E-61 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 P029_01595 0c0c8d527ace6a83a2842578a48d5c8f 415 SUPERFAMILY SSF161098 174 399 4.32E-33 T 14-10-2018 IPR035906 MetI-like superfamily P029_01595 0c0c8d527ace6a83a2842578a48d5c8f 415 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 212 411 6.7E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P029_01595 0c0c8d527ace6a83a2842578a48d5c8f 415 Pfam PF11812 Domain of unknown function (DUF3333) 21 131 8.4E-14 T 14-10-2018 IPR024573 Domain of unknown function DUF3333 P029_01595 0c0c8d527ace6a83a2842578a48d5c8f 415 Gene3D G3DSA:1.10.3720.10 187 412 1.4E-31 T 14-10-2018 IPR035906 MetI-like superfamily P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 SUPERFAMILY SSF51735 2 179 3.82E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 SUPERFAMILY SSF48179 178 322 2.04E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PIRSF PIRSF000114 1 323 2.0E-85 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 159 2.1E-40 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 179 318 4.5E-35 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 55 82 6.4E-32 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 172 196 6.4E-32 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 6.4E-32 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 197 221 6.4E-32 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 132 152 6.4E-32 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 6.4E-32 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 187 208 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 Gene3D G3DSA:3.40.50.720 1 186 1.3E-51 T 14-10-2018 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 320 29.495 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 P029_00840 eb0cb68afa6a8e310db145b60af472dc 324 Gene3D G3DSA:1.10.1040.10 188 324 6.3E-34 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 P029_02315 30393fc0c3852770c45427707ea1bea8 137 Pfam PF00384 Molybdopterin oxidoreductase 2 131 1.3E-14 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02315 30393fc0c3852770c45427707ea1bea8 137 SUPERFAMILY SSF53706 2 137 8.64E-13 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 SUPERFAMILY SSF103491 9 415 2.09E-111 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 14 417 4.7E-109 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PIRSF PIRSF004557 4 431 1.2E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 ProSitePatterns PS00756 Protein secY signature 2. 167 184 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 Gene3D G3DSA:1.10.3370.10 7 420 4.8E-137 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 Pfam PF00344 SecY translocase 69 407 4.3E-100 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 306 328 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 16 34 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 393 411 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 PRINTS PR00303 Preprotein translocase SecY subunit signature 361 379 2.3E-84 T 14-10-2018 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 P029_01290 e6a9decfeeead1758de8a84ea9da54ec 434 Hamap MF_01465 Protein translocase subunit SecY [secY]. 3 424 26.648 T 14-10-2018 IPR026593 Protein translocase subunit SecY P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 SUPERFAMILY SSF54364 5 73 8.63E-21 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 Gene3D G3DSA:3.30.110.10 77 169 7.0E-29 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 SUPERFAMILY SSF55200 84 165 1.26E-26 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 8 167 8.0E-45 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 Gene3D G3DSA:3.10.20.80 3 76 3.8E-22 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 8 73 1.3E-20 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 P029_05380 bc253a4cc50754483537fbaf0eea7a26 172 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 83 165 2.7E-29 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 P029_00785 d443f26aad5abbc68c114d95d04efa38 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 224 245 2.7E-15 T 14-10-2018 P029_00785 d443f26aad5abbc68c114d95d04efa38 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 81 106 2.7E-15 T 14-10-2018 P029_00785 d443f26aad5abbc68c114d95d04efa38 499 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 246 272 2.7E-15 T 14-10-2018 P029_00785 d443f26aad5abbc68c114d95d04efa38 499 Pfam PF00361 Proton-conducting membrane transporter 136 437 4.8E-51 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_04180 637d7247a58ddca15ff9eefab1a5f177 543 Gene3D G3DSA:3.40.50.10710 206 355 2.4E-154 T 14-10-2018 P029_04180 637d7247a58ddca15ff9eefab1a5f177 543 SMART SM00849 20 194 1.4E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase P029_04180 637d7247a58ddca15ff9eefab1a5f177 543 SUPERFAMILY SSF56281 10 420 2.1E-80 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P029_04180 637d7247a58ddca15ff9eefab1a5f177 543 Gene3D G3DSA:3.60.15.10 11 425 2.4E-154 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like P029_04180 637d7247a58ddca15ff9eefab1a5f177 543 Pfam PF00753 Metallo-beta-lactamase superfamily 22 162 2.0E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase P029_04180 637d7247a58ddca15ff9eefab1a5f177 543 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 351 407 1.9E-8 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain P029_00075 9d42cf5861e112174268773a3b314558 275 Gene3D G3DSA:3.90.1170.20 8 270 7.7E-91 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 P029_00075 9d42cf5861e112174268773a3b314558 275 SUPERFAMILY SSF51690 106 270 4.71E-53 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 P029_00075 9d42cf5861e112174268773a3b314558 275 Gene3D G3DSA:3.20.20.70 109 261 7.7E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_00075 9d42cf5861e112174268773a3b314558 275 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 17 104 3.6E-21 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 P029_00075 9d42cf5861e112174268773a3b314558 275 PIRSF PIRSF006250 1 274 3.7E-75 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 P029_00075 9d42cf5861e112174268773a3b314558 275 SUPERFAMILY SSF54675 3 105 1.12E-21 T 14-10-2018 P029_00075 9d42cf5861e112174268773a3b314558 275 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 6 270 1.4E-75 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 P029_00075 9d42cf5861e112174268773a3b314558 275 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 106 270 7.5E-51 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 P029_02405 9a435ad7366e5d407cf7b8b80ff49ac5 337 SUPERFAMILY SSF53335 5 334 3.83E-101 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_02405 9a435ad7366e5d407cf7b8b80ff49ac5 337 Gene3D G3DSA:3.40.50.12710 1 336 4.6E-89 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 P029_02405 9a435ad7366e5d407cf7b8b80ff49ac5 337 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 56 283 3.5E-54 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 SUPERFAMILY SSF118215 18 389 7.59E-77 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 Gene3D G3DSA:1.10.3860.10 2 395 4.3E-75 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 216 235 1.5E-20 T 14-10-2018 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 344 364 1.5E-20 T 14-10-2018 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 317 336 1.5E-20 T 14-10-2018 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 69 94 1.5E-20 T 14-10-2018 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 282 308 1.5E-20 T 14-10-2018 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.5E-20 T 14-10-2018 P029_01840 8e24085ddfad7abb65d13c20c00d239f 396 Pfam PF00375 Sodium:dicarboxylate symporter family 7 388 2.2E-75 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 P029_00900 6e7269b38b71677c0140295ff8241fed 176 SUPERFAMILY SSF55083 13 161 1.7E-41 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P029_00900 6e7269b38b71677c0140295ff8241fed 176 Gene3D G3DSA:3.30.70.560 12 171 1.6E-45 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P029_00900 6e7269b38b71677c0140295ff8241fed 176 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 14 144 1.5E-30 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P029_00900 6e7269b38b71677c0140295ff8241fed 176 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 15 144 5.5E-32 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 P029_04185 6867621f0060396c849de49f827a9cc2 435 SUPERFAMILY SSF82171 101 429 3.02E-41 T 14-10-2018 P029_04185 6867621f0060396c849de49f827a9cc2 435 Gene3D G3DSA:2.120.10.30 165 433 2.2E-53 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like P029_04185 6867621f0060396c849de49f827a9cc2 435 Pfam PF07676 WD40-like Beta Propeller Repeat 197 219 0.022 T 14-10-2018 IPR011659 WD40-like Beta Propeller P029_04185 6867621f0060396c849de49f827a9cc2 435 Pfam PF07676 WD40-like Beta Propeller Repeat 280 316 2.3E-7 T 14-10-2018 IPR011659 WD40-like Beta Propeller P029_04185 6867621f0060396c849de49f827a9cc2 435 Pfam PF07676 WD40-like Beta Propeller Repeat 325 350 1.9E-6 T 14-10-2018 IPR011659 WD40-like Beta Propeller P029_04185 6867621f0060396c849de49f827a9cc2 435 Gene3D G3DSA:3.40.50.10070 21 164 3.7E-24 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 P029_04185 6867621f0060396c849de49f827a9cc2 435 Pfam PF04052 TolB amino-terminal domain 25 129 2.7E-18 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 P029_01260 96f50a92ba7c05328cb384f60ae80ff9 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01260 96f50a92ba7c05328cb384f60ae80ff9 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 24.46 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid P029_01260 96f50a92ba7c05328cb384f60ae80ff9 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.3E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01260 96f50a92ba7c05328cb384f60ae80ff9 101 SUPERFAMILY SSF57716 3 101 1.43E-35 T 14-10-2018 P029_01260 96f50a92ba7c05328cb384f60ae80ff9 101 Gene3D G3DSA:4.10.830.10 40 101 6.8E-23 T 14-10-2018 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Gene3D G3DSA:3.40.50.300 53 305 1.8E-105 T 14-10-2018 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Gene3D G3DSA:3.30.50.30 2 47 9.2E-18 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Gene3D G3DSA:1.10.8.60 306 408 5.7E-32 T 14-10-2018 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 395 3.4E-184 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Pfam PF07724 AAA domain (Cdc48 subfamily) 105 301 1.4E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 SMART SM01086 307 398 2.4E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_03850 a686b45a011e77358dfae5692b7f3a50 415 SMART SM00382 104 257 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_03850 a686b45a011e77358dfae5692b7f3a50 415 SMART SM00994 8 47 2.2E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 307 376 8.0E-13 T 14-10-2018 IPR019489 Clp ATPase, C-terminal P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Pfam PF06689 ClpX C4-type zinc finger 10 46 3.8E-17 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 SUPERFAMILY SSF52540 58 384 7.48E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03850 a686b45a011e77358dfae5692b7f3a50 415 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 405 49.421 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 P029_03850 a686b45a011e77358dfae5692b7f3a50 415 SUPERFAMILY SSF57716 9 44 2.0E-10 T 14-10-2018 P029_02600 ac9b65307bdf931afdb46e269f9392ef 240 Pfam PF00121 Triosephosphate isomerase 4 232 3.1E-53 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_02600 ac9b65307bdf931afdb46e269f9392ef 240 SUPERFAMILY SSF51351 3 238 4.84E-63 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 P029_02600 ac9b65307bdf931afdb46e269f9392ef 240 Gene3D G3DSA:3.20.20.70 1 240 2.7E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_02160 298cddf742488b7c30a4a50662fe4190 198 SUPERFAMILY SSF53335 17 198 4.43E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_02160 298cddf742488b7c30a4a50662fe4190 198 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 2 197 29.606 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 P029_02160 298cddf742488b7c30a4a50662fe4190 198 Gene3D G3DSA:3.40.50.150 14 198 6.9E-57 T 14-10-2018 P029_02160 298cddf742488b7c30a4a50662fe4190 198 PIRSF PIRSF005461 1 198 2.5E-67 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 P029_02160 298cddf742488b7c30a4a50662fe4190 198 Pfam PF01728 FtsJ-like methyltransferase 18 196 1.2E-54 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 P029_02180 298cddf742488b7c30a4a50662fe4190 198 SUPERFAMILY SSF53335 17 198 4.43E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_02180 298cddf742488b7c30a4a50662fe4190 198 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 2 197 29.606 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 P029_02180 298cddf742488b7c30a4a50662fe4190 198 Gene3D G3DSA:3.40.50.150 14 198 6.9E-57 T 14-10-2018 P029_02180 298cddf742488b7c30a4a50662fe4190 198 PIRSF PIRSF005461 1 198 2.5E-67 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 P029_02180 298cddf742488b7c30a4a50662fe4190 198 Pfam PF01728 FtsJ-like methyltransferase 18 196 1.2E-54 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 P029_02680 878f625fc846793d6ee32cabad4224e3 145 Gene3D G3DSA:3.40.1400.10 1 145 1.8E-55 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 P029_02680 878f625fc846793d6ee32cabad4224e3 145 Pfam PF02502 Ribose/Galactose Isomerase 7 143 4.9E-47 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 P029_02680 878f625fc846793d6ee32cabad4224e3 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 7 144 7.5E-50 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 P029_02680 878f625fc846793d6ee32cabad4224e3 145 SUPERFAMILY SSF89623 5 144 9.03E-48 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 P029_02680 878f625fc846793d6ee32cabad4224e3 145 PIRSF PIRSF005384 5 145 2.5E-49 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 P029_02680 878f625fc846793d6ee32cabad4224e3 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 6 144 1.0E-45 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 402 429 1.6E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 SUPERFAMILY SSF52113 597 671 2.8E-17 T 14-10-2018 IPR036420 BRCT domain superfamily P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 666 2.2E-202 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 598 670 8.7E-12 T 14-10-2018 IPR001357 BRCT domain P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 SUPERFAMILY SSF56091 4 309 3.2E-95 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 120 149 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:2.40.50.140 311 383 2.9E-31 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:3.30.470.90 74 310 2.4E-78 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:3.40.50.10190 593 676 8.0E-24 T 14-10-2018 IPR036420 BRCT domain superfamily P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:1.10.150.20 427 503 7.0E-20 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 SMART SM00532 5 443 7.0E-189 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Pfam PF12826 Helix-hairpin-helix motif 510 576 2.4E-8 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 SUPERFAMILY SSF47781 398 582 6.67E-42 T 14-10-2018 IPR010994 RuvA domain 2-like P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 315 390 1.2E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:1.10.287.610 1 73 1.1E-14 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 SMART SM00292 596 673 3.9E-11 T 14-10-2018 IPR001357 BRCT domain P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 SUPERFAMILY SSF50249 312 392 5.14E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 310 1.1E-93 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:1.10.150.20 505 587 2.7E-12 T 14-10-2018 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 PIRSF PIRSF001604 1 675 4.7E-218 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Hamap MF_01588 DNA ligase [ligA]. 4 670 43.547 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 P029_00600 869f29c0e40ada394a759b5b4ee678ce 677 Gene3D G3DSA:2.20.70.80 388 425 7.0E-9 T 14-10-2018 P029_01445 36377a659b9cf13fbdea369004c25614 191 Gene3D G3DSA:3.40.50.300 1 47 1.0E-8 T 14-10-2018 P029_03800 88cb7a0acc0123ea7a75621fe299ac92 92 Pfam PF02325 YGGT family 10 85 2.2E-12 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 Pfam PF00849 RNA pseudouridylate synthase 84 228 4.2E-32 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 Gene3D G3DSA:3.30.2350.10 75 286 2.0E-53 T 14-10-2018 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 SUPERFAMILY SSF55120 72 283 3.04E-50 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 SMART SM00363 1 64 5.5E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 122 136 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 Gene3D G3DSA:3.10.290.10 1 53 4.7E-8 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 SUPERFAMILY SSF55174 1 99 2.59E-5 T 14-10-2018 P029_02350 b0e56b5de307319fb9bb780ab924f60b 297 Pfam PF01479 S4 domain 1 47 1.3E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_05780 f1490a7d85961629a94d71aebb1160a8 740 Gene3D G3DSA:3.40.50.300 324 559 4.5E-43 T 14-10-2018 P029_05780 f1490a7d85961629a94d71aebb1160a8 740 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 123 566 7.7E-151 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 P029_05780 f1490a7d85961629a94d71aebb1160a8 740 SUPERFAMILY SSF52540 117 556 1.28E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 Gene3D G3DSA:3.40.50.720 2 245 5.5E-59 T 14-10-2018 P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.3E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 Pfam PF00106 short chain dehydrogenase 9 203 8.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01015 f458155601b0b064eb5dfcca0c4f10d6 248 SUPERFAMILY SSF51735 5 236 1.53E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 Gene3D G3DSA:3.30.470.20 184 358 9.1E-61 T 14-10-2018 P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 SUPERFAMILY SSF56059 110 307 1.94E-58 T 14-10-2018 P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 Pfam PF02222 ATP-grasp domain 119 288 2.4E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 Gene3D G3DSA:3.30.1490.20 115 183 4.6E-22 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 SUPERFAMILY SSF52440 11 107 2.59E-21 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 Gene3D G3DSA:3.40.50.20 2 114 6.9E-33 T 14-10-2018 P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 SUPERFAMILY SSF51246 312 356 8.63E-10 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 15 354 1.1E-106 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 P029_04510 b6d863fbe96f69042c8ae9e20c710a12 358 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 358 36.632 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 P029_00020 c303742405fffbfd27453af50eb488b0 241 SMART SM00382 28 212 6.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00020 c303742405fffbfd27453af50eb488b0 241 Pfam PF00005 ABC transporter 19 164 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_00020 c303742405fffbfd27453af50eb488b0 241 SUPERFAMILY SSF52540 4 227 8.87E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00020 c303742405fffbfd27453af50eb488b0 241 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_00020 c303742405fffbfd27453af50eb488b0 241 Gene3D G3DSA:3.40.50.300 3 238 7.7E-66 T 14-10-2018 P029_00020 c303742405fffbfd27453af50eb488b0 241 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 32 45 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 P029_02300 7f34bbc8b052f694d0bbc080f8c356b5 152 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 146 1.8E-27 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_02300 7f34bbc8b052f694d0bbc080f8c356b5 152 SUPERFAMILY SSF52121 5 150 1.7E-37 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_02300 7f34bbc8b052f694d0bbc080f8c356b5 152 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 4 150 21.265 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_02300 7f34bbc8b052f694d0bbc080f8c356b5 152 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 9 147 5.8E-36 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_02300 7f34bbc8b052f694d0bbc080f8c356b5 152 Gene3D G3DSA:3.40.50.960 2 152 2.6E-39 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 P029_02430 28fe9be3906c8080351177a51706c6f1 269 Pfam PF00488 MutS domain V 138 265 6.2E-62 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P029_02430 28fe9be3906c8080351177a51706c6f1 269 Gene3D G3DSA:3.40.50.300 96 268 9.3E-73 T 14-10-2018 P029_02430 28fe9be3906c8080351177a51706c6f1 269 SMART SM00534 134 269 2.4E-55 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P029_02430 28fe9be3906c8080351177a51706c6f1 269 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 215 231 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 P029_02430 28fe9be3906c8080351177a51706c6f1 269 SUPERFAMILY SSF48334 38 95 5.1E-9 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily P029_02430 28fe9be3906c8080351177a51706c6f1 269 Gene3D G3DSA:1.10.1420.10 39 55 2.5E-8 T 14-10-2018 P029_02430 28fe9be3906c8080351177a51706c6f1 269 SUPERFAMILY SSF52540 96 268 1.57E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_02430 28fe9be3906c8080351177a51706c6f1 269 Gene3D G3DSA:1.10.1420.10 56 89 2.5E-8 T 14-10-2018 P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 PIRSF PIRSF005303 1 316 1.0E-82 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 SUPERFAMILY SSF55326 2 135 9.07E-27 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 Gene3D G3DSA:3.30.1330.10 1 136 2.6E-31 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 299 2.4E-7 T 14-10-2018 IPR010918 PurM-like, C-terminal domain P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 Gene3D G3DSA:3.90.650.10 142 316 2.2E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 Pfam PF00586 AIR synthase related protein, N-terminal domain 24 135 7.8E-19 T 14-10-2018 IPR016188 PurM-like, N-terminal domain P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 SUPERFAMILY SSF56042 140 302 4.04E-34 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 316 26.06 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 P029_03020 d8ec1f4a82300cd2eb1f64e876955c41 318 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 315 4.8E-83 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 P029_04775 533836051d2b530eabf2600bd41cfdef 80 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 79 4.1E-32 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 P029_04775 533836051d2b530eabf2600bd41cfdef 80 Pfam PF00462 Glutaredoxin 4 63 5.7E-22 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 P029_04775 533836051d2b530eabf2600bd41cfdef 80 SUPERFAMILY SSF52833 1 79 5.99E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_04775 533836051d2b530eabf2600bd41cfdef 80 Gene3D G3DSA:3.40.30.10 1 80 1.1E-29 T 14-10-2018 P029_04775 533836051d2b530eabf2600bd41cfdef 80 ProSitePatterns PS00195 Glutaredoxin active site. 6 21 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 P029_04775 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 4 22 2.7E-17 T 14-10-2018 IPR014025 Glutaredoxin subgroup P029_04775 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 60 73 2.7E-17 T 14-10-2018 IPR014025 Glutaredoxin subgroup P029_04775 533836051d2b530eabf2600bd41cfdef 80 PRINTS PR00160 Glutaredoxin signature 46 59 2.7E-17 T 14-10-2018 IPR014025 Glutaredoxin subgroup P029_00995 3bab1398cb65e7efb47357d9df4498fe 239 Gene3D G3DSA:2.60.130.10 59 239 3.7E-26 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 P029_00995 3bab1398cb65e7efb47357d9df4498fe 239 Pfam PF00775 Dioxygenase 92 164 4.1E-11 T 14-10-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 P029_00995 3bab1398cb65e7efb47357d9df4498fe 239 SUPERFAMILY SSF49482 41 238 1.44E-35 T 14-10-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 P029_00245 d8c59716dd09c097348e315420696114 427 Gene3D G3DSA:1.20.1250.20 7 422 1.4E-51 T 14-10-2018 P029_00245 d8c59716dd09c097348e315420696114 427 Pfam PF00083 Sugar (and other) transporter 11 215 1.2E-19 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 P029_00245 d8c59716dd09c097348e315420696114 427 SUPERFAMILY SSF103473 7 414 4.58E-54 T 14-10-2018 IPR036259 MFS transporter superfamily P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 79 3.0E-25 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 Gene3D G3DSA:3.30.160.20 7 78 1.3E-27 T 14-10-2018 P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 3 169 30.936 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 1.2E-23 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 SUPERFAMILY SSF54768 14 81 5.02E-21 T 14-10-2018 P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 167 3.6E-57 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 SUPERFAMILY SSF54211 85 165 3.54E-22 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold P029_01280 22ebada9f1dd5389ea46561fab69bfb7 173 Gene3D G3DSA:3.30.230.10 79 173 2.6E-31 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup P029_00205 2801e32d737e382e8e8495f09b55151a 150 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 146 5.6E-41 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 P029_00205 2801e32d737e382e8e8495f09b55151a 150 Pfam PF02470 MlaD protein 42 116 4.6E-18 T 14-10-2018 IPR003399 Mce/MlaD P029_01350 e4eb75af583ed0fe17b11f27e760e914 252 SMART SM00382 30 225 2.3E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01350 e4eb75af583ed0fe17b11f27e760e914 252 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 8 249 4.3E-107 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 P029_01350 e4eb75af583ed0fe17b11f27e760e914 252 Gene3D G3DSA:3.40.50.300 6 252 3.1E-64 T 14-10-2018 P029_01350 e4eb75af583ed0fe17b11f27e760e914 252 SUPERFAMILY SSF52540 8 240 3.15E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01350 e4eb75af583ed0fe17b11f27e760e914 252 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_01350 e4eb75af583ed0fe17b11f27e760e914 252 Pfam PF00005 ABC transporter 23 177 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 141 153 3.6E-19 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 62 78 3.6E-19 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 84 100 3.6E-19 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 108 127 3.6E-19 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 3.6E-19 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 SUPERFAMILY SSF53098 1 158 3.79E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_00085 e50747a0b6cc8358273748afb9e588d3 163 Gene3D G3DSA:3.30.420.10 1 159 1.5E-39 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 156 33.505 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 153 1.1E-35 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_00085 e50747a0b6cc8358273748afb9e588d3 163 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 156 3.6E-33 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 P029_05545 0f9283adecdbe662f47c960443e082c5 233 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 229 3.3E-50 T 14-10-2018 IPR006214 Bax inhibitor 1-related P029_01210 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:4.10.950.10 196 275 1.2E-35 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01210 a32969606a53d23d2559cd5a13250d54 276 SUPERFAMILY SSF50104 126 270 4.33E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily P029_01210 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:2.30.30.30 115 195 1.4E-28 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 P029_01210 a32969606a53d23d2559cd5a13250d54 276 SUPERFAMILY SSF50249 3 123 1.58E-43 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold P029_01210 a32969606a53d23d2559cd5a13250d54 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.3E-30 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01210 a32969606a53d23d2559cd5a13250d54 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 276 44.644 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 P029_01210 a32969606a53d23d2559cd5a13250d54 276 Gene3D G3DSA:2.40.50.140 1 114 7.6E-43 T 14-10-2018 P029_01210 a32969606a53d23d2559cd5a13250d54 276 SMART SM01382 124 252 7.8E-84 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 P029_01210 a32969606a53d23d2559cd5a13250d54 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 1.8E-54 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 P029_01210 a32969606a53d23d2559cd5a13250d54 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 269 2.2E-119 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 P029_01210 a32969606a53d23d2559cd5a13250d54 276 PIRSF PIRSF002158 7 275 1.8E-102 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01210 a32969606a53d23d2559cd5a13250d54 276 SMART SM01383 42 118 5.8E-45 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01210 a32969606a53d23d2559cd5a13250d54 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01650 7b4914d51b7c2974570948421087dfe5 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 281 9.4E-95 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 P029_01650 7b4914d51b7c2974570948421087dfe5 317 Gene3D G3DSA:3.40.1010.20 99 195 5.3E-106 T 14-10-2018 P029_01650 7b4914d51b7c2974570948421087dfe5 317 Gene3D G3DSA:3.40.50.11270 12 98 5.3E-106 T 14-10-2018 P029_01650 7b4914d51b7c2974570948421087dfe5 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 285 35.856 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 P029_01650 7b4914d51b7c2974570948421087dfe5 317 Pfam PF02401 LytB protein 3 280 4.4E-89 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 P029_01650 7b4914d51b7c2974570948421087dfe5 317 Gene3D G3DSA:3.40.1010.20 6 279 5.3E-106 T 14-10-2018 P029_02250 d6708c3cef39f7393396ec32581b9bd7 228 SUPERFAMILY SSF51366 2 226 3.24E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P029_02250 d6708c3cef39f7393396ec32581b9bd7 228 SMART SM00934 6 224 1.1E-75 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02250 d6708c3cef39f7393396ec32581b9bd7 228 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 223 6.2E-38 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02250 d6708c3cef39f7393396ec32581b9bd7 228 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02250 d6708c3cef39f7393396ec32581b9bd7 228 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 8 224 2.7E-45 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 P029_02250 d6708c3cef39f7393396ec32581b9bd7 228 Gene3D G3DSA:3.20.20.70 1 228 4.4E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_04875 839c5927aa0e576824f8ba49cc95097b 406 Gene3D G3DSA:2.40.50.100 5 84 2.0E-17 T 14-10-2018 P029_04875 839c5927aa0e576824f8ba49cc95097b 406 SUPERFAMILY SSF51230 15 97 1.26E-17 T 14-10-2018 IPR011053 Single hybrid motif P029_04875 839c5927aa0e576824f8ba49cc95097b 406 Pfam PF00364 Biotin-requiring enzyme 14 78 4.1E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment P029_04875 839c5927aa0e576824f8ba49cc95097b 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 P029_04875 839c5927aa0e576824f8ba49cc95097b 406 SUPERFAMILY SSF52777 176 404 3.91E-88 T 14-10-2018 P029_04875 839c5927aa0e576824f8ba49cc95097b 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 177 403 1.6E-82 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 P029_04875 839c5927aa0e576824f8ba49cc95097b 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 14 405 1.6E-145 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 P029_04875 839c5927aa0e576824f8ba49cc95097b 406 Gene3D G3DSA:3.30.559.10 175 406 2.3E-94 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 P029_01405 694bed2f391e916688dc4b8c91870d06 352 Pfam PF01266 FAD dependent oxidoreductase 7 330 9.8E-26 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 P029_01405 694bed2f391e916688dc4b8c91870d06 352 Gene3D G3DSA:3.30.9.10 89 300 6.4E-39 T 14-10-2018 P029_01405 694bed2f391e916688dc4b8c91870d06 352 Gene3D G3DSA:3.50.50.60 7 332 6.4E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_01405 694bed2f391e916688dc4b8c91870d06 352 SUPERFAMILY SSF51905 7 296 3.56E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_04350 51bec568c0807b76f0c7d02d74e43645 293 Pfam PF01040 UbiA prenyltransferase family 29 274 8.2E-52 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 P029_04350 51bec568c0807b76f0c7d02d74e43645 293 Gene3D G3DSA:1.10.357.140 22 177 8.4E-19 T 14-10-2018 P029_04350 51bec568c0807b76f0c7d02d74e43645 293 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 66 88 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site P029_04350 51bec568c0807b76f0c7d02d74e43645 293 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 14 292 2.7E-92 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 P029_04350 51bec568c0807b76f0c7d02d74e43645 293 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 293 18.108 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 Pfam PF03462 PCRF domain 4 185 2.5E-50 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 Gene3D G3DSA:3.30.160.20 191 286 7.4E-92 T 14-10-2018 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 331 34.183 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 SMART SM00937 46 160 3.9E-43 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 210 226 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 328 1.0E-140 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 Pfam PF00472 RF-1 domain 194 303 1.2E-41 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 Gene3D G3DSA:3.30.70.1660 94 323 7.4E-92 T 14-10-2018 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 Gene3D G3DSA:1.20.58.410 1 78 5.3E-14 T 14-10-2018 P029_02070 56ee31d5e2f8c4f140564adef4b66c16 340 SUPERFAMILY SSF75620 3 328 1.06E-118 T 14-10-2018 P029_05560 1c0d275736420136b168f6aa0a62f2d5 153 SUPERFAMILY SSF56925 32 153 3.66E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05560 1c0d275736420136b168f6aa0a62f2d5 153 Pfam PF01617 Surface antigen 15 153 2.7E-51 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05560 1c0d275736420136b168f6aa0a62f2d5 153 Gene3D G3DSA:2.40.160.20 11 117 5.0E-10 T 14-10-2018 P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 99 109 4.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 32 50 4.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 PRINTS PR00332 Histidine triad family signature 11 27 4.3E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 ProSitePatterns PS00892 HIT domain signature. 92 110 - T 14-10-2018 IPR019808 Histidine triad, conserved site P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 SUPERFAMILY SSF54197 6 113 3.97E-30 T 14-10-2018 IPR036265 HIT-like superfamily P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 Gene3D G3DSA:3.30.428.10 4 123 1.7E-31 T 14-10-2018 IPR036265 HIT-like superfamily P029_03485 22c9eb3d5aa9c11034293f3aa3b3652c 124 Pfam PF01230 HIT domain 17 111 7.7E-25 T 14-10-2018 IPR001310 Histidine triad (HIT) protein P029_01130 a0a6131d5521d49904ed10fd0fe41fc5 122 SUPERFAMILY SSF102829 5 84 4.84E-9 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily P029_01130 a0a6131d5521d49904ed10fd0fe41fc5 122 Pfam PF05164 Cell division protein ZapA 5 92 5.3E-10 T 14-10-2018 IPR007838 Cell division protein ZapA-like P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 PRINTS PR00604 Class IA and IB cytochrome C signature 111 121 1.1E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 PRINTS PR00604 Class IA and IB cytochrome C signature 144 154 1.1E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 PRINTS PR00604 Class IA and IB cytochrome C signature 82 89 1.1E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 PRINTS PR00604 Class IA and IB cytochrome C signature 160 168 1.1E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 PRINTS PR00604 Class IA and IB cytochrome C signature 95 110 1.1E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 PRINTS PR00604 Class IA and IB cytochrome C signature 125 141 1.1E-17 T 14-10-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 Gene3D G3DSA:1.10.760.10 38 168 6.0E-37 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 Pfam PF00034 Cytochrome c 73 169 3.3E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00780 a4cbf17650408a48b6cd2b407bb829fb 174 SUPERFAMILY SSF46626 70 170 3.11E-31 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P029_05125 9e68355d5269a555352b424b52208678 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 201 1.5E-15 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 P029_05125 9e68355d5269a555352b424b52208678 313 SUPERFAMILY SSF51735 1 254 6.03E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_05125 9e68355d5269a555352b424b52208678 313 Gene3D G3DSA:3.40.50.720 2 256 4.3E-43 T 14-10-2018 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 SUPERFAMILY SSF54368 6 100 1.26E-30 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 Pfam PF00120 Glutamine synthetase, catalytic domain 105 469 6.6E-119 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 Gene3D G3DSA:3.30.590.10 107 460 8.9E-127 T 14-10-2018 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 470 8.7E-174 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 SMART SM01230 104 382 9.0E-125 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 SUPERFAMILY SSF55931 105 470 5.89E-119 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 Gene3D G3DSA:3.10.20.70 5 106 4.1E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 P029_05055 e217c33623dc08665c2d275a4e37dce3 472 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 96 6.1E-26 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 P029_02880 6435104682b134b10ab2753e65a55a26 91 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_02880 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.6E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.6E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.6E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 SUPERFAMILY SSF110324 2 82 6.88E-32 T 14-10-2018 P029_02880 6435104682b134b10ab2753e65a55a26 91 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 25.622 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 Pfam PF01016 Ribosomal L27 protein 2 81 1.1E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 29 83 2.0E-16 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 TIGRFAM TIGR00062 L27: ribosomal protein bL27 2 81 8.0E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02880 6435104682b134b10ab2753e65a55a26 91 Gene3D G3DSA:2.40.50.100 21 90 4.2E-29 T 14-10-2018 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 185 224 1300.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 574 604 67.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 146 175 5.2 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 349 379 5.5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 416 446 2000.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 607 637 540.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 450 483 2.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 530 560 2.0E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SMART SM00248 383 412 0.0011 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 Pfam PF12796 Ankyrin repeats (3 copies) 344 413 1.7E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 Pfam PF13606 Ankyrin repeat 530 560 0.0012 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 Gene3D G3DSA:1.25.40.20 336 494 1.5E-25 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SUPERFAMILY SSF48403 350 629 6.79E-34 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 Gene3D G3DSA:1.25.40.20 136 283 2.1E-7 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 Gene3D G3DSA:1.25.40.20 503 652 8.7E-15 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03725 6c565e3947c590c8b9ecdea43e54e8f2 890 SUPERFAMILY SSF48403 143 272 6.6E-5 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_01825 b1360874e8eceb06b072dbb6f5c029bd 193 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 5 189 8.2E-63 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 P029_01825 b1360874e8eceb06b072dbb6f5c029bd 193 Pfam PF01926 50S ribosome-binding GTPase 23 141 3.5E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 P029_01825 b1360874e8eceb06b072dbb6f5c029bd 193 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 8 193 24.71 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 P029_01825 b1360874e8eceb06b072dbb6f5c029bd 193 Gene3D G3DSA:3.40.50.300 2 193 1.7E-46 T 14-10-2018 P029_01825 b1360874e8eceb06b072dbb6f5c029bd 193 SUPERFAMILY SSF52540 4 192 7.27E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00090 82f0363b42bf8514a9aee947ac80850e 273 Pfam PF00510 Cytochrome c oxidase subunit III 5 272 2.7E-77 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00090 82f0363b42bf8514a9aee947ac80850e 273 Gene3D G3DSA:1.10.287.70 1 69 3.6E-20 T 14-10-2018 P029_00090 82f0363b42bf8514a9aee947ac80850e 273 SUPERFAMILY SSF81452 2 271 1.78E-80 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_00090 82f0363b42bf8514a9aee947ac80850e 273 Gene3D G3DSA:1.20.120.80 72 272 2.2E-62 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_01725 6aab04da69de91d44346765c9ed19151 196 SUPERFAMILY SSF52972 6 187 4.19E-53 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P029_01725 6aab04da69de91d44346765c9ed19151 196 Hamap MF_00528 Septum formation protein Maf [maf]. 6 193 26.594 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 P029_01725 6aab04da69de91d44346765c9ed19151 196 PIRSF PIRSF006305 1 193 4.0E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 P029_01725 6aab04da69de91d44346765c9ed19151 196 Pfam PF02545 Maf-like protein 7 187 1.8E-46 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 P029_01725 6aab04da69de91d44346765c9ed19151 196 Gene3D G3DSA:3.90.950.10 6 192 7.5E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like P029_01725 6aab04da69de91d44346765c9ed19151 196 TIGRFAM TIGR00172 maf: septum formation protein Maf 6 186 1.9E-40 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 P029_00215 61c2a96d3a7ee22dcacfd73478b1762c 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 66.937 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 P029_00215 61c2a96d3a7ee22dcacfd73478b1762c 153 Pfam PF03477 ATP cone domain 49 136 7.1E-14 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 P029_00215 61c2a96d3a7ee22dcacfd73478b1762c 153 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 2.4E-44 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 P029_01355 bffb98e196458c4588855984bcf6a2d5 392 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 385 3.1E-123 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P029_01355 bffb98e196458c4588855984bcf6a2d5 392 Gene3D G3DSA:3.20.20.105 1 392 6.8E-149 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P029_01355 bffb98e196458c4588855984bcf6a2d5 392 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 392 44.864 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P029_01355 bffb98e196458c4588855984bcf6a2d5 392 Pfam PF01702 Queuine tRNA-ribosyltransferase 149 390 1.6E-75 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P029_01355 bffb98e196458c4588855984bcf6a2d5 392 SUPERFAMILY SSF51713 5 390 2.88E-127 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P029_01355 bffb98e196458c4588855984bcf6a2d5 392 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 385 2.9E-125 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 P029_03005 69c38ea29107d21108980d1c6bababd3 171 PIRSF PIRSF000216 1 171 4.0E-67 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03005 69c38ea29107d21108980d1c6bababd3 171 Gene3D G3DSA:3.40.30.10 84 171 3.7E-30 T 14-10-2018 P029_03005 69c38ea29107d21108980d1c6bababd3 171 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 21 165 6.5E-58 T 14-10-2018 P029_03005 69c38ea29107d21108980d1c6bababd3 171 SUPERFAMILY SSF52833 11 168 2.68E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_03005 69c38ea29107d21108980d1c6bababd3 171 Gene3D G3DSA:1.10.10.1590 9 83 2.0E-23 T 14-10-2018 P029_03005 69c38ea29107d21108980d1c6bababd3 171 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 21 165 1.2E-54 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03005 69c38ea29107d21108980d1c6bababd3 171 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_04380 3eea8b338d9031d2db1c96253c778059 94 SUPERFAMILY SSF55979 17 87 1.33E-9 T 14-10-2018 P029_04380 3eea8b338d9031d2db1c96253c778059 94 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 17 87 1.5E-10 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P029_04380 3eea8b338d9031d2db1c96253c778059 94 Gene3D G3DSA:3.10.150.10 18 88 4.9E-10 T 14-10-2018 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 SMART SM00562 2 139 2.2E-79 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 2 137 34.554 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 8.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 5 27 8.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 49 68 8.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 8.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 69 86 8.3E-39 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 Pfam PF00334 Nucleoside diphosphate kinase 3 137 6.7E-55 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 SUPERFAMILY SSF54919 2 139 2.1E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_04970 a1f3b35f8d9a87ec50e5faf5a1be076c 140 Gene3D G3DSA:3.30.70.141 1 140 2.2E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 P029_01360 9287fff4c81bdd976b24e1ece5c720df 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 7.5E-24 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01360 9287fff4c81bdd976b24e1ece5c720df 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 19.352 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_01360 9287fff4c81bdd976b24e1ece5c720df 58 SUPERFAMILY SSF57829 2 54 1.22E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 P029_01360 9287fff4c81bdd976b24e1ece5c720df 58 Pfam PF01783 Ribosomal L32p protein family 2 55 4.4E-24 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00495 039e1f723ddd6c2bd02c95c04ed8df7c 150 Gene3D G3DSA:3.30.420.10 1 149 4.8E-54 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_00495 039e1f723ddd6c2bd02c95c04ed8df7c 150 Pfam PF00075 RNase H 5 143 1.0E-49 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 P029_00495 039e1f723ddd6c2bd02c95c04ed8df7c 150 SUPERFAMILY SSF53098 4 145 7.46E-52 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_00495 039e1f723ddd6c2bd02c95c04ed8df7c 150 Hamap MF_00042 Ribonuclease H [rnhA]. 3 150 30.117 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 P029_01905 9a0a4bae114152ee081a534512e5120a 464 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 460 15.396 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 P029_01905 9a0a4bae114152ee081a534512e5120a 464 Pfam PF00361 Proton-conducting membrane transporter 120 403 2.3E-58 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01075 7359f60649f42ec2b81f79a9445bfbec 270 Pfam PF00809 Pterin binding enzyme 12 254 1.3E-63 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P029_01075 7359f60649f42ec2b81f79a9445bfbec 270 SUPERFAMILY SSF51717 7 268 2.35E-75 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P029_01075 7359f60649f42ec2b81f79a9445bfbec 270 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 10 25 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P029_01075 7359f60649f42ec2b81f79a9445bfbec 270 Gene3D G3DSA:3.20.20.20 2 270 2.8E-82 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P029_01075 7359f60649f42ec2b81f79a9445bfbec 270 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 44 57 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 P029_01075 7359f60649f42ec2b81f79a9445bfbec 270 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 9 266 1.4E-74 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 Gene3D G3DSA:3.90.180.10 12 319 4.0E-84 T 14-10-2018 P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 SMART SM00829 11 323 8.9E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 SUPERFAMILY SSF50129 3 145 1.83E-28 T 14-10-2018 IPR011032 GroES-like superfamily P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 Gene3D G3DSA:3.40.50.720 124 269 4.0E-84 T 14-10-2018 P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 Pfam PF00107 Zinc-binding dehydrogenase 152 252 3.5E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 SUPERFAMILY SSF51735 114 262 1.03E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_01085 fc2cb0edcafdd80fed6d96522c82df51 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 4.7E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 P029_03135 8e8723c90cf8a590580299e34cdd88b7 261 SUPERFAMILY SSF53335 68 210 5.44E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_03135 8e8723c90cf8a590580299e34cdd88b7 261 Gene3D G3DSA:3.40.50.150 35 238 3.8E-13 T 14-10-2018 P029_03135 8e8723c90cf8a590580299e34cdd88b7 261 Pfam PF08241 Methyltransferase domain 88 135 1.9E-7 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P029_00620 adc1269b115aabefcfd79a7da1a4013b 431 SUPERFAMILY SSF56925 312 392 2.43E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_00620 adc1269b115aabefcfd79a7da1a4013b 431 Gene3D G3DSA:2.40.160.20 206 392 4.3E-9 T 14-10-2018 P029_00620 adc1269b115aabefcfd79a7da1a4013b 431 Pfam PF01617 Surface antigen 27 431 3.1E-66 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05415 b84826c7c86cf01487bab7513702eeaf 363 Gene3D G3DSA:3.40.50.10990 172 342 3.4E-53 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 P029_05415 b84826c7c86cf01487bab7513702eeaf 363 Pfam PF00925 GTP cyclohydrolase II 187 339 1.1E-49 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 P029_05415 b84826c7c86cf01487bab7513702eeaf 363 SUPERFAMILY SSF142695 187 342 1.29E-46 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 P029_00460 c6db7a60520ba39f112937792c288ee4 227 Pfam PF13462 Thioredoxin 52 218 9.3E-46 T 14-10-2018 IPR012336 Thioredoxin-like fold P029_00460 c6db7a60520ba39f112937792c288ee4 227 Gene3D G3DSA:3.40.30.10 54 205 3.8E-44 T 14-10-2018 P029_00460 c6db7a60520ba39f112937792c288ee4 227 SUPERFAMILY SSF52833 47 218 5.47E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_00460 c6db7a60520ba39f112937792c288ee4 227 Gene3D G3DSA:1.10.40.80 109 171 3.8E-44 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 Pfam PF00361 Proton-conducting membrane transporter 128 420 1.3E-80 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 5 618 4.4E-210 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 418 440 4.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 4.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 268 290 4.5E-8 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 60 116 1.2E-22 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 2.3E-62 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 2.3E-62 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 250 276 2.3E-62 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 2.3E-62 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.3E-62 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 318 330 2.3E-62 T 14-10-2018 P029_01895 905ccf5490ffd239d5fcaa5bff96c556 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 228 249 2.3E-62 T 14-10-2018 P029_04245 38598e309d1215acfa5c65b1aeb87432 83 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 1 54 4.2E-11 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P029_04245 38598e309d1215acfa5c65b1aeb87432 83 SUPERFAMILY SSF55979 1 56 3.08E-10 T 14-10-2018 P029_04245 38598e309d1215acfa5c65b1aeb87432 83 Gene3D G3DSA:3.10.150.10 1 58 3.7E-12 T 14-10-2018 P029_00010 3b6bd9147145a9dc84b077b50dd20fd7 208 Pfam PF00834 Ribulose-phosphate 3 epimerase family 1 193 8.5E-71 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P029_00010 3b6bd9147145a9dc84b077b50dd20fd7 208 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 126 148 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P029_00010 3b6bd9147145a9dc84b077b50dd20fd7 208 Gene3D G3DSA:3.20.20.70 1 207 2.1E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_00010 3b6bd9147145a9dc84b077b50dd20fd7 208 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 1 206 1.4E-78 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P029_00010 3b6bd9147145a9dc84b077b50dd20fd7 208 PIRSF PIRSF001461 1 208 3.5E-81 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 P029_00010 3b6bd9147145a9dc84b077b50dd20fd7 208 SUPERFAMILY SSF51366 2 207 6.73E-65 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 P029_01505 c72099c165c1dd7e7f539fa16f972c29 152 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 15 143 6.0E-16 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 P029_01505 c72099c165c1dd7e7f539fa16f972c29 152 Gene3D G3DSA:3.30.530.20 6 151 3.6E-31 T 14-10-2018 IPR023393 START-like domain superfamily P029_01505 c72099c165c1dd7e7f539fa16f972c29 152 SUPERFAMILY SSF55961 8 150 1.1E-22 T 14-10-2018 P029_01330 a92937fcee8c75bb20f8332e3dd11a5e 443 Pfam PF01235 Sodium:alanine symporter family 47 432 1.3E-55 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P029_01330 a92937fcee8c75bb20f8332e3dd11a5e 443 PRINTS PR00175 Sodium/alanine symporter signature 190 208 1.7E-11 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P029_01330 a92937fcee8c75bb20f8332e3dd11a5e 443 PRINTS PR00175 Sodium/alanine symporter signature 305 323 1.7E-11 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P029_01330 a92937fcee8c75bb20f8332e3dd11a5e 443 PRINTS PR00175 Sodium/alanine symporter signature 79 101 1.7E-11 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P029_01330 a92937fcee8c75bb20f8332e3dd11a5e 443 PRINTS PR00175 Sodium/alanine symporter signature 343 365 1.7E-11 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P029_01330 a92937fcee8c75bb20f8332e3dd11a5e 443 PRINTS PR00175 Sodium/alanine symporter signature 404 424 1.7E-11 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 P029_05150 ac8fcbf7a2308211e0325bea6f26a676 245 SUPERFAMILY SSF53271 68 242 8.0E-31 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like P029_05150 ac8fcbf7a2308211e0325bea6f26a676 245 Gene3D G3DSA:3.40.50.2020 141 245 9.4E-18 T 14-10-2018 P029_05150 ac8fcbf7a2308211e0325bea6f26a676 245 Pfam PF00156 Phosphoribosyl transferase domain 149 242 1.6E-11 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 P029_02720 abb437364d3eaac320abe538426acc98 168 SUPERFAMILY SSF52374 4 160 5.63E-39 T 14-10-2018 P029_02720 abb437364d3eaac320abe538426acc98 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 163 32.247 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P029_02720 abb437364d3eaac320abe538426acc98 168 Pfam PF01467 Cytidylyltransferase-like 7 138 4.2E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P029_02720 abb437364d3eaac320abe538426acc98 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 1.2E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P029_02720 abb437364d3eaac320abe538426acc98 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.2E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P029_02720 abb437364d3eaac320abe538426acc98 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.2E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P029_02720 abb437364d3eaac320abe538426acc98 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.2E-34 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P029_02720 abb437364d3eaac320abe538426acc98 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 160 2.1E-56 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 P029_02720 abb437364d3eaac320abe538426acc98 168 Gene3D G3DSA:3.40.50.620 1 167 5.6E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_02720 abb437364d3eaac320abe538426acc98 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 59 5.9E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 P029_02605 838aca537309ef72015a503160567363 339 Gene3D G3DSA:3.40.190.10 37 335 3.4E-87 T 14-10-2018 P029_02605 838aca537309ef72015a503160567363 339 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 334 1.8E-74 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P029_02605 838aca537309ef72015a503160567363 339 SUPERFAMILY SSF53850 33 337 5.8E-66 T 14-10-2018 P029_02605 838aca537309ef72015a503160567363 339 Gene3D G3DSA:3.40.190.10 128 266 3.4E-87 T 14-10-2018 P029_02605 838aca537309ef72015a503160567363 339 Pfam PF16868 NMT1-like family 37 335 5.1E-77 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family P029_00565 9a551de9f946923282370049b7cd39ec 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 3 190 1.4E-49 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 P029_00565 9a551de9f946923282370049b7cd39ec 206 Gene3D G3DSA:3.40.50.300 1 204 1.5E-37 T 14-10-2018 P029_00565 9a551de9f946923282370049b7cd39ec 206 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 P029_00565 9a551de9f946923282370049b7cd39ec 206 SMART SM00382 26 201 0.0031 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_00565 9a551de9f946923282370049b7cd39ec 206 SUPERFAMILY SSF52540 2 193 3.29E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00565 9a551de9f946923282370049b7cd39ec 206 Pfam PF00005 ABC transporter 18 155 9.5E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 P029_00500 789d3b0c2cb14b624a4e923374c225c9 999 Pfam PF13116 Protein of unknown function 337 496 3.4E-8 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 P029_00500 789d3b0c2cb14b624a4e923374c225c9 999 Pfam PF13502 AsmA-like C-terminal region 824 955 7.5E-11 T 14-10-2018 IPR032712 AsmA-like, C-terminal P029_02140 6e60e439c56b30e9dda91e854119fd67 448 SUPERFAMILY SSF54631 136 266 9.85E-24 T 14-10-2018 P029_02140 6e60e439c56b30e9dda91e854119fd67 448 SMART SM00116 143 196 54.0 T 14-10-2018 IPR000644 CBS domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 SMART SM00116 207 255 7.2E-7 T 14-10-2018 IPR000644 CBS domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Pfam PF00571 CBS domain 136 192 0.005 T 14-10-2018 IPR000644 CBS domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Pfam PF00571 CBS domain 200 255 1.1E-6 T 14-10-2018 IPR000644 CBS domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Pfam PF01769 Divalent cation transporter 319 440 5.6E-21 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Pfam PF03448 MgtE intracellular N domain 37 134 5.0E-16 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Gene3D G3DSA:1.10.357.20 272 448 3.4E-45 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Gene3D G3DSA:3.10.580.10 132 259 4.0E-32 T 14-10-2018 P029_02140 6e60e439c56b30e9dda91e854119fd67 448 Gene3D G3DSA:1.25.60.10 5 131 3.3E-11 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily P029_02140 6e60e439c56b30e9dda91e854119fd67 448 TIGRFAM TIGR00400 mgtE: magnesium transporter 18 447 1.2E-78 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 P029_02140 6e60e439c56b30e9dda91e854119fd67 448 SUPERFAMILY SSF161093 276 447 2.35E-41 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 P029_02140 6e60e439c56b30e9dda91e854119fd67 448 SMART SM00924 33 136 4.7E-22 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain P029_02140 6e60e439c56b30e9dda91e854119fd67 448 SUPERFAMILY SSF158791 8 133 4.84E-20 T 14-10-2018 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 Pfam PF01676 Metalloenzyme superfamily 5 481 3.4E-69 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 85 280 7.8E-61 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 Gene3D G3DSA:3.40.720.10 6 490 2.7E-187 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 SUPERFAMILY SSF53649 5 492 7.98E-67 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 492 5.5E-178 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 PIRSF PIRSF001492 1 495 4.7E-190 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 Gene3D G3DSA:3.40.1450.10 77 293 2.7E-187 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 493 44.661 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_01690 84dcb8b3c295b27a0dfcebe0c685f2a0 496 SUPERFAMILY SSF64158 77 291 9.42E-68 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 P029_03880 fe6a22f898de09293a3450359100d06b 257 Pfam PF00583 Acetyltransferase (GNAT) family 161 243 1.6E-9 T 14-10-2018 IPR000182 GNAT domain P029_03880 fe6a22f898de09293a3450359100d06b 257 SUPERFAMILY SSF55729 160 253 1.57E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase P029_03880 fe6a22f898de09293a3450359100d06b 257 Gene3D G3DSA:3.40.630.30 151 252 8.5E-14 T 14-10-2018 P029_02325 c94897e4740ff40525b199dab072628a 227 Pfam PF02666 Phosphatidylserine decarboxylase 42 208 1.0E-27 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 P029_02325 c94897e4740ff40525b199dab072628a 227 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 5 212 33.96 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 P029_02325 c94897e4740ff40525b199dab072628a 227 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 6 212 5.2E-49 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 P029_02740 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 Pfam PF00578 AhpC/TSA family 5 137 1.1E-28 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_02740 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 Gene3D G3DSA:3.40.30.10 2 195 5.8E-67 T 14-10-2018 P029_02740 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 192 1.0E-9 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_02740 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 SUPERFAMILY SSF52833 1 192 8.26E-57 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_02740 6f7d5b26769fa8f61cf1bdcde1cd65b3 199 PIRSF PIRSF000239 1 198 8.1E-56 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_03205 3f2f1f38ca9f239baaba3b1d58848439 292 Pfam PF13177 DNA polymerase III, delta subunit 15 145 1.4E-24 T 14-10-2018 P029_03205 3f2f1f38ca9f239baaba3b1d58848439 292 Gene3D G3DSA:3.40.50.300 8 141 4.2E-33 T 14-10-2018 P029_03205 3f2f1f38ca9f239baaba3b1d58848439 292 SUPERFAMILY SSF52540 14 169 2.91E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03205 3f2f1f38ca9f239baaba3b1d58848439 292 SMART SM00382 19 145 4.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_03750 0a9c3fec9660c077870776b5962f341d 234 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 207 5.3E-28 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel P029_01150 f56fc51cbfe22d27a662c34f1e0fb8e3 97 Pfam PF00216 Bacterial DNA-binding protein 3 86 8.8E-10 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 P029_01150 f56fc51cbfe22d27a662c34f1e0fb8e3 97 Gene3D G3DSA:4.10.520.10 1 88 3.1E-10 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P029_01150 f56fc51cbfe22d27a662c34f1e0fb8e3 97 SUPERFAMILY SSF47729 3 86 9.42E-12 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SUPERFAMILY SSF48403 383 632 6.47E-13 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Pfam PF00023 Ankyrin repeat 826 857 0.028 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Gene3D G3DSA:1.25.40.20 536 874 9.8E-40 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 499 528 1.2 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 712 741 0.15 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 745 774 3.5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 388 419 1400.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 562 595 1500.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 423 457 1600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 144 174 910.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 602 632 190.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 178 212 130.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 671 708 470.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 216 245 0.042 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 780 812 900.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 44 73 15.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 465 495 600.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SMART SM00248 826 855 0.022 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 PRINTS PR01415 Ankyrin repeat signature 695 709 1.8E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 PRINTS PR01415 Ankyrin repeat signature 500 515 1.8E-5 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Pfam PF12796 Ankyrin repeats (3 copies) 691 766 8.1E-11 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Pfam PF12796 Ankyrin repeats (3 copies) 149 244 1.1E-8 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Gene3D G3DSA:1.25.40.20 201 369 6.0E-11 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SUPERFAMILY SSF48403 128 188 4.72E-5 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Gene3D G3DSA:1.25.40.20 3 200 6.2E-18 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 Gene3D G3DSA:1.25.40.20 370 526 3.4E-16 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_03045 a9b3929c3333760709546c7615d2fd5a 1239 SUPERFAMILY SSF48403 41 867 1.51E-44 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily P029_05160 c6a6b4c0eba15745a44198d560e6eeed 190 Pfam PF00578 AhpC/TSA family 15 132 1.1E-14 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_05160 c6a6b4c0eba15745a44198d560e6eeed 190 Gene3D G3DSA:3.40.30.10 7 188 1.5E-39 T 14-10-2018 P029_05160 c6a6b4c0eba15745a44198d560e6eeed 190 SUPERFAMILY SSF52833 6 183 1.01E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 SUPERFAMILY SSF81442 9 517 1.83E-206 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 243 297 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 13 517 1.2E-209 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 Gene3D G3DSA:1.20.210.10 9 518 2.4E-224 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 21 466 9.2E-144 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 346 364 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 424 445 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 111 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 241 262 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 311 332 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 59 82 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 190 209 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 287 302 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 161 179 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 374 393 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 12 37 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04345 d975f4cf1d6375ce57654f0c6febc7b6 518 PRINTS PR01165 Cytochrome c oxidase subunit I signature 129 141 3.7E-137 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_05040 a478003fd3b6cb4dea5310a31ce82a97 414 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 P029_05040 a478003fd3b6cb4dea5310a31ce82a97 414 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 3 396 3.2E-175 T 14-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 P029_05040 a478003fd3b6cb4dea5310a31ce82a97 414 Pfam PF00155 Aminotransferase class I and II 46 385 1.3E-64 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P029_05040 a478003fd3b6cb4dea5310a31ce82a97 414 Gene3D G3DSA:3.40.640.10 61 293 9.3E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_05040 a478003fd3b6cb4dea5310a31ce82a97 414 SUPERFAMILY SSF53383 3 393 5.26E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_05040 a478003fd3b6cb4dea5310a31ce82a97 414 Gene3D G3DSA:3.90.1150.10 16 383 9.3E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_04295 69a6d1517775e00ab4902e27902df518 471 SUPERFAMILY SSF55424 350 466 3.61E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_04295 69a6d1517775e00ab4902e27902df518 471 PIRSF PIRSF000350 1 467 4.9E-76 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 P029_04295 69a6d1517775e00ab4902e27902df518 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 326 3.0E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P029_04295 69a6d1517775e00ab4902e27902df518 471 Gene3D G3DSA:3.50.50.60 148 269 9.9E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_04295 69a6d1517775e00ab4902e27902df518 471 SUPERFAMILY SSF51905 1 336 7.13E-60 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_04295 69a6d1517775e00ab4902e27902df518 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 469 4.9E-155 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.3E-37 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 7.3E-37 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 7.3E-37 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 7.3E-37 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 7.3E-37 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 2.2E-31 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P029_04295 69a6d1517775e00ab4902e27902df518 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 P029_04295 69a6d1517775e00ab4902e27902df518 471 Gene3D G3DSA:3.30.390.30 352 471 4.5E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_04295 69a6d1517775e00ab4902e27902df518 471 Gene3D G3DSA:3.50.50.60 5 326 9.9E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 173 198 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 2.3E-67 T 14-10-2018 P029_04295 69a6d1517775e00ab4902e27902df518 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 2.3E-67 T 14-10-2018 P029_00130 af5e932228fe3558a5cf516f2c71106f 115 Pfam PF01617 Surface antigen 38 97 3.2E-7 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04060 748a880a38f5b7d27d9971de2659617a 188 Pfam PF01899 Na+/H+ ion antiporter subunit 31 168 1.1E-18 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 SUPERFAMILY SSF51395 3 347 1.62E-86 T 14-10-2018 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 Gene3D G3DSA:3.20.20.70 1 348 5.6E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 346 1.3E-104 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 75 94 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 283 303 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 Pfam PF01180 Dihydroorotate dehydrogenase 45 331 9.1E-83 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 P029_04050 e37b1aaba4c37819f2af154a04505e8a 348 PIRSF PIRSF000164 14 348 5.0E-89 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 P029_02800 52668eea63462e4490eef6ab9e7e5b31 129 Pfam PF01521 Iron-sulphur cluster biosynthesis 20 125 5.1E-13 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 P029_02800 52668eea63462e4490eef6ab9e7e5b31 129 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 128 2.0E-28 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 P029_02800 52668eea63462e4490eef6ab9e7e5b31 129 SUPERFAMILY SSF89360 18 118 1.1E-20 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P029_02800 52668eea63462e4490eef6ab9e7e5b31 129 Gene3D G3DSA:2.60.300.12 18 129 2.7E-28 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 P029_02800 52668eea63462e4490eef6ab9e7e5b31 129 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 110 127 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 P029_01610 c16cd34616649933ac13400f140ddb6b 801 SUPERFAMILY SSF52540 411 753 1.28E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01610 c16cd34616649933ac13400f140ddb6b 801 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 16 797 1.4E-256 T 14-10-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 P029_01610 c16cd34616649933ac13400f140ddb6b 801 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 193 395 1.3E-54 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 P029_01610 c16cd34616649933ac13400f140ddb6b 801 SMART SM00382 446 704 2.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain P029_01420 6a4307787bcbe3e90d992182555e9d0f 280 Pfam PF00348 Polyprenyl synthetase 39 232 1.9E-43 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 P029_01420 6a4307787bcbe3e90d992182555e9d0f 280 Gene3D G3DSA:1.10.600.10 3 280 6.9E-70 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily P029_01420 6a4307787bcbe3e90d992182555e9d0f 280 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 86 102 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site P029_01420 6a4307787bcbe3e90d992182555e9d0f 280 SUPERFAMILY SSF48576 8 257 3.84E-61 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily P029_00960 1c9d4782ab756d204caacd4ca7a3885f 260 PIRSF PIRSF001586 1 260 1.5E-73 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 P029_00960 1c9d4782ab756d204caacd4ca7a3885f 260 SUPERFAMILY SSF52317 1 259 3.4E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_00960 1c9d4782ab756d204caacd4ca7a3885f 260 Gene3D G3DSA:3.40.50.880 1 260 1.5E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_00960 1c9d4782ab756d204caacd4ca7a3885f 260 SMART SM01211 1 259 2.1E-101 T 14-10-2018 P029_00960 1c9d4782ab756d204caacd4ca7a3885f 260 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 259 5.2E-68 T 14-10-2018 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 Gene3D G3DSA:2.30.110.10 1 189 9.2E-67 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 SUPERFAMILY SSF50475 2 189 1.38E-59 T 14-10-2018 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 148 189 7.7E-15 T 14-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 1 189 33.185 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 17 94 1.3E-19 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 PIRSF PIRSF000190 1 189 4.0E-67 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 187 1.3E-65 T 14-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P029_04035 c022d3f4e91822bac66fe90e5172246e 189 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 158 171 - T 14-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 Gene3D G3DSA:3.90.930.12 85 180 2.8E-28 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 Pfam PF00347 Ribosomal protein L6 11 80 1.7E-5 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 Pfam PF00347 Ribosomal protein L6 93 164 5.3E-12 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 PIRSF PIRSF002162 1 180 8.7E-35 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 SUPERFAMILY SSF56053 85 177 1.18E-28 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 SUPERFAMILY SSF56053 2 84 9.11E-14 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 6.2E-58 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 PRINTS PR00059 Ribosomal protein L6 signature 101 117 4.7E-20 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 PRINTS PR00059 Ribosomal protein L6 signature 73 98 4.7E-20 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 PRINTS PR00059 Ribosomal protein L6 signature 143 164 4.7E-20 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 P029_01270 c3f00fbd803d51f4619a20a3401c91c6 180 Gene3D G3DSA:3.90.930.12 2 84 6.1E-17 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_04220 e41bbcce6a52f7847ac699af77f1e23a 209 Pfam PF02630 SCO1/SenC 54 185 8.1E-36 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 P029_04220 e41bbcce6a52f7847ac699af77f1e23a 209 Gene3D G3DSA:3.40.30.10 33 204 7.0E-44 T 14-10-2018 P029_04220 e41bbcce6a52f7847ac699af77f1e23a 209 SUPERFAMILY SSF52833 55 191 2.32E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 Pfam PF11953 Domain of unknown function (DUF3470) 81 119 1.2E-11 T 14-10-2018 IPR022569 Ferredoxin, C-terminal P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 Gene3D G3DSA:3.30.70.20 2 121 3.0E-25 T 14-10-2018 P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.2E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.2E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.2E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 SUPERFAMILY SSF54862 3 97 1.59E-23 T 14-10-2018 P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P029_00125 bc87fda4ca8306158d4b3a73a3b25513 126 Pfam PF00037 4Fe-4S binding domain 34 55 6.4E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P029_03025 5f3f31a64554fa5699894bb81868f438 245 Pfam PF02565 Recombination protein O C terminal 81 222 5.6E-13 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 P029_03025 5f3f31a64554fa5699894bb81868f438 245 ProDom PD202328 DNA REPAIR RECOMBINATION RECO DAMAGE O O RECO-RELATED RECOMBINATIONAL RP549 127 233 1.0E-31 T 14-10-2018 P029_03025 5f3f31a64554fa5699894bb81868f438 245 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 180 2.9E-24 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 P029_03025 5f3f31a64554fa5699894bb81868f438 245 Gene3D G3DSA:2.40.50.140 1 73 3.1E-5 T 14-10-2018 P029_03025 5f3f31a64554fa5699894bb81868f438 245 Hamap MF_00201 DNA repair protein RecO [recO]. 1 232 13.772 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 P029_03025 5f3f31a64554fa5699894bb81868f438 245 Pfam PF11967 Recombination protein O N terminal 1 74 6.5E-13 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal P029_03025 5f3f31a64554fa5699894bb81868f438 245 SUPERFAMILY SSF57863 81 181 4.45E-8 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 SMART SM00244 23 185 6.2E-31 T 14-10-2018 IPR001107 Band 7 domain P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 Gene3D G3DSA:3.30.479.30 52 187 6.7E-20 T 14-10-2018 P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 SUPERFAMILY SSF117892 56 192 2.09E-24 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 Pfam PF01145 SPFH domain / Band 7 family 27 202 1.3E-29 T 14-10-2018 IPR001107 Band 7 domain P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 PIRSF PIRSF005651 2 290 7.1E-82 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 PRINTS PR00721 Stomatin signature 78 99 1.5E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 PRINTS PR00721 Stomatin signature 180 201 1.5E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 PRINTS PR00721 Stomatin signature 161 179 1.5E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 P029_04640 6ff213e8396710d7a2ffbb2ec9da4c82 291 PRINTS PR00721 Stomatin signature 30 52 1.5E-8 T 14-10-2018 IPR001972 Stomatin family GO:0016020 P029_00950 577f5f4f7469b1ad6dfddfafc2ef6f64 311 Gene3D G3DSA:3.30.540.10 8 295 2.9E-98 T 14-10-2018 P029_00950 577f5f4f7469b1ad6dfddfafc2ef6f64 311 PIRSF PIRSF004532 2 309 2.2E-98 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 P029_00950 577f5f4f7469b1ad6dfddfafc2ef6f64 311 Gene3D G3DSA:3.40.190.90 122 282 2.9E-98 T 14-10-2018 P029_00950 577f5f4f7469b1ad6dfddfafc2ef6f64 311 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 5 307 1.2E-107 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 P029_00950 577f5f4f7469b1ad6dfddfafc2ef6f64 311 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 5 295 1.7E-78 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 P029_00950 577f5f4f7469b1ad6dfddfafc2ef6f64 311 SUPERFAMILY SSF56655 4 295 5.43E-77 T 14-10-2018 P029_01265 a74b6c04c70c350a138a688a50a787c6 133 SUPERFAMILY SSF56047 3 133 2.22E-40 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01265 a74b6c04c70c350a138a688a50a787c6 133 Gene3D G3DSA:3.30.1490.10 80 133 8.7E-22 T 14-10-2018 P029_01265 a74b6c04c70c350a138a688a50a787c6 133 ProSitePatterns PS00053 Ribosomal protein S8 signature. 103 120 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01265 a74b6c04c70c350a138a688a50a787c6 133 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 133 29.018 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_01265 a74b6c04c70c350a138a688a50a787c6 133 Gene3D G3DSA:3.30.1370.30 4 79 1.4E-20 T 14-10-2018 P029_01265 a74b6c04c70c350a138a688a50a787c6 133 Pfam PF00410 Ribosomal protein S8 5 133 7.0E-43 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_04205 574030913a8af10f0065511795bbb85a 543 Gene3D G3DSA:1.10.3720.10 5 262 9.1E-36 T 14-10-2018 IPR035906 MetI-like superfamily P029_04205 574030913a8af10f0065511795bbb85a 543 SUPERFAMILY SSF161098 8 258 2.52E-30 T 14-10-2018 IPR035906 MetI-like superfamily P029_04205 574030913a8af10f0065511795bbb85a 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 252 2.0E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P029_04205 574030913a8af10f0065511795bbb85a 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 525 4.7E-8 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 P029_04205 574030913a8af10f0065511795bbb85a 543 SUPERFAMILY SSF161098 283 529 2.34E-34 T 14-10-2018 IPR035906 MetI-like superfamily P029_04205 574030913a8af10f0065511795bbb85a 543 Gene3D G3DSA:1.10.3720.10 282 537 3.8E-32 T 14-10-2018 IPR035906 MetI-like superfamily P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 84 134 7.0E-7 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 64 134 6.4E-21 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 134 17.828 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 SUPERFAMILY SSF54736 64 134 1.53E-16 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 134 1.7E-27 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 Gene3D G3DSA:3.30.1390.10 63 134 1.7E-20 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like P029_04125 0be1a67466a8d520da9ce6b34db261a0 134 SUPERFAMILY SSF48300 5 65 9.68E-8 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02330 7dac582d7c521b4657277f13b1465b87 1123 Gene3D G3DSA:3.50.50.60 363 498 5.6E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_02330 7dac582d7c521b4657277f13b1465b87 1123 Gene3D G3DSA:3.50.50.60 499 560 5.6E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily P029_02330 7dac582d7c521b4657277f13b1465b87 1123 Gene3D G3DSA:3.40.50.80 899 1027 8.3E-12 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P029_02330 7dac582d7c521b4657277f13b1465b87 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 486 504 3.3E-8 T 14-10-2018 P029_02330 7dac582d7c521b4657277f13b1465b87 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 540 558 3.3E-8 T 14-10-2018 P029_02330 7dac582d7c521b4657277f13b1465b87 1123 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 362 381 3.3E-8 T 14-10-2018 P029_02330 7dac582d7c521b4657277f13b1465b87 1123 SUPERFAMILY SSF51971 360 705 1.65E-19 T 14-10-2018 P029_02330 7dac582d7c521b4657277f13b1465b87 1123 Gene3D G3DSA:2.40.30.10 799 897 2.4E-14 T 14-10-2018 P029_02330 7dac582d7c521b4657277f13b1465b87 1123 SUPERFAMILY SSF52343 894 1076 1.44E-15 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain P029_02330 7dac582d7c521b4657277f13b1465b87 1123 SUPERFAMILY SSF63380 799 898 1.17E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel P029_02330 7dac582d7c521b4657277f13b1465b87 1123 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 360 738 4.0E-13 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 P029_00605 187db282022c05bf820911815a8474a7 109 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 6 103 9.1E-47 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related P029_00605 187db282022c05bf820911815a8474a7 109 PIRSF PIRSF005894 1 109 1.4E-49 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 P029_00605 187db282022c05bf820911815a8474a7 109 SUPERFAMILY SSF52833 4 106 9.51E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_00605 187db282022c05bf820911815a8474a7 109 Gene3D G3DSA:3.40.30.10 8 104 1.4E-34 T 14-10-2018 P029_00605 187db282022c05bf820911815a8474a7 109 Pfam PF00462 Glutaredoxin 18 82 4.4E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 Gene3D G3DSA:2.40.420.20 285 353 5.2E-39 T 14-10-2018 P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 Gene3D G3DSA:2.40.30.170 63 284 5.2E-39 T 14-10-2018 P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 262 1.4E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 Gene3D G3DSA:1.10.287.470 109 168 5.2E-39 T 14-10-2018 P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 Gene3D G3DSA:2.40.50.100 74 202 5.2E-39 T 14-10-2018 P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 355 1.6E-35 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 P029_01715 5b567e3f234a8d86c7c46fd9d1bdae6c 359 SUPERFAMILY SSF111369 66 278 7.85E-21 T 14-10-2018 P029_05060 98adeddbbc64a8882aaecbd25f4f5713 327 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 209 221 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site P029_05060 98adeddbbc64a8882aaecbd25f4f5713 327 Pfam PF00348 Polyprenyl synthetase 36 268 8.5E-64 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 P029_05060 98adeddbbc64a8882aaecbd25f4f5713 327 Gene3D G3DSA:1.10.600.10 4 327 2.7E-93 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily P029_05060 98adeddbbc64a8882aaecbd25f4f5713 327 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 87 101 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site P029_05060 98adeddbbc64a8882aaecbd25f4f5713 327 SUPERFAMILY SSF48576 8 326 2.7E-84 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily P029_01510 bf7b8897f2b8008d1337828e79fc893a 520 Pfam PF00361 Proton-conducting membrane transporter 151 337 2.3E-15 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_04870 e7aaf2966c963b049e328b54ec2ecd2d 170 SUPERFAMILY SSF51161 7 167 1.01E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily P029_04870 e7aaf2966c963b049e328b54ec2ecd2d 170 Gene3D G3DSA:2.160.10.10 4 170 3.3E-57 T 14-10-2018 P029_04870 e7aaf2966c963b049e328b54ec2ecd2d 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 125 0.0027 T 14-10-2018 IPR001451 Hexapeptide repeat P029_04870 e7aaf2966c963b049e328b54ec2ecd2d 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 47 1.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat P029_00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Pfam PF01513 ATP-NAD kinase 42 217 4.5E-17 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P029_00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Hamap MF_00361 NAD kinase [nadK]. 13 270 19.347 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P029_00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Gene3D G3DSA:3.40.50.10330 22 120 1.1E-9 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 P029_00420 88e0200cf92b76f6a1dcb0308d0260e9 270 Gene3D G3DSA:2.60.200.30 121 245 6.5E-25 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 P029_00420 88e0200cf92b76f6a1dcb0308d0260e9 270 SUPERFAMILY SSF111331 40 256 5.63E-50 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily P029_04935 5deacda2ab701f81f7c6f389976ed0ad 362 Gene3D G3DSA:2.30.42.10 140 223 8.7E-15 T 14-10-2018 P029_04935 5deacda2ab701f81f7c6f389976ed0ad 362 SMART SM00228 127 197 0.0079 T 14-10-2018 IPR001478 PDZ domain GO:0005515 P029_04935 5deacda2ab701f81f7c6f389976ed0ad 362 Pfam PF02163 Peptidase family M50 21 348 1.1E-68 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 P029_04935 5deacda2ab701f81f7c6f389976ed0ad 362 SUPERFAMILY SSF50156 101 206 4.99E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 P029_05655 b3cdbb03623dda5244e0f596178f918c 96 Pfam PF01649 Ribosomal protein S20 2 85 1.0E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_05655 b3cdbb03623dda5244e0f596178f918c 96 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 7.1E-18 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_05655 b3cdbb03623dda5244e0f596178f918c 96 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 16 89 2.0E-12 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_05655 b3cdbb03623dda5244e0f596178f918c 96 Gene3D G3DSA:1.20.58.110 1 87 7.2E-23 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_05655 b3cdbb03623dda5244e0f596178f918c 96 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 86 14.845 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_05655 b3cdbb03623dda5244e0f596178f918c 96 SUPERFAMILY SSF46992 3 87 2.62E-23 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_05320 3e8893066fc9073b1d79e594260b863f 246 Gene3D G3DSA:2.40.160.20 30 208 5.0E-10 T 14-10-2018 P029_05320 3e8893066fc9073b1d79e594260b863f 246 Pfam PF01617 Surface antigen 89 246 3.3E-52 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05320 3e8893066fc9073b1d79e594260b863f 246 SUPERFAMILY SSF56925 124 246 7.85E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01890 e83fde6a6e3a490a3f59fd97ac9f1305 108 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 14 100 2.3E-21 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like P029_01890 e83fde6a6e3a490a3f59fd97ac9f1305 108 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 9 108 17.954 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 P029_02545 4e657e86ed9d3098e8255c2073100dca 625 Pfam PF13145 PPIC-type PPIASE domain 272 361 1.9E-8 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 P029_02545 4e657e86ed9d3098e8255c2073100dca 625 SUPERFAMILY SSF109998 54 249 5.1E-15 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily P029_02545 4e657e86ed9d3098e8255c2073100dca 625 Gene3D G3DSA:1.10.4030.10 46 160 3.2E-6 T 14-10-2018 P029_02545 4e657e86ed9d3098e8255c2073100dca 625 Pfam PF13624 SurA N-terminal domain 3 153 5.8E-24 T 14-10-2018 P029_02545 4e657e86ed9d3098e8255c2073100dca 625 SUPERFAMILY SSF54534 227 349 9.81E-13 T 14-10-2018 P029_02545 4e657e86ed9d3098e8255c2073100dca 625 Gene3D G3DSA:3.10.50.40 257 376 9.1E-10 T 14-10-2018 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 17 33 4.2E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 167 186 4.2E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 94 106 4.2E-23 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 1 210 1.7E-46 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 ProSitePatterns PS00501 Signal peptidases I serine active site. 26 33 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 ProSitePatterns PS00760 Signal peptidases I lysine active site. 96 108 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 Gene3D G3DSA:2.170.230.10 105 166 1.8E-54 T 14-10-2018 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 SUPERFAMILY SSF51306 15 228 4.39E-58 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 Gene3D G3DSA:2.10.109.10 15 210 1.8E-54 T 14-10-2018 P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 Pfam PF00717 Peptidase S24-like 23 118 1.1E-19 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C P029_03265 7a182ff6728b8fb5e5eb651c98fe38e6 231 ProSitePatterns PS00761 Signal peptidases I signature 3. 172 185 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 P029_05800 c23aa936bc4a23c7436cee432a2e04ed 223 SUPERFAMILY SSF54427 84 222 8.76E-35 T 14-10-2018 IPR032710 NTF2-like domain superfamily P029_05800 c23aa936bc4a23c7436cee432a2e04ed 223 Gene3D G3DSA:3.10.450.230 82 223 1.2E-36 T 14-10-2018 P029_05800 c23aa936bc4a23c7436cee432a2e04ed 223 Pfam PF04335 VirB8 protein 15 221 2.6E-56 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 P029_05800 c23aa936bc4a23c7436cee432a2e04ed 223 PIRSF PIRSF003299 2 223 6.0E-89 T 14-10-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 P029_04440 d608d81ad7d0741d484e051f0c110cee 158 Pfam PF00572 Ribosomal protein L13 14 138 3.9E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 P029_04440 d608d81ad7d0741d484e051f0c110cee 158 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 142 24.042 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 P029_04440 d608d81ad7d0741d484e051f0c110cee 158 SUPERFAMILY SSF52161 1 140 8.9E-51 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 P029_04440 d608d81ad7d0741d484e051f0c110cee 158 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 7 142 1.8E-53 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04440 d608d81ad7d0741d484e051f0c110cee 158 Gene3D G3DSA:3.90.1180.10 1 143 3.4E-54 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 P029_04440 d608d81ad7d0741d484e051f0c110cee 158 PIRSF PIRSF002181 2 155 8.3E-45 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 Pfam PF02167 Cytochrome C1 family 33 247 7.2E-95 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 31 50 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 51 70 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 195 214 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 96 116 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 214 229 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 129 153 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 PRINTS PR00603 Cytochrome C1 signature 175 194 1.2E-60 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 SUPERFAMILY SSF46626 32 213 1.39E-63 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P029_01760 ef08e3110ca29ab74381581b75c6c90d 250 Gene3D G3DSA:1.10.760.10 28 214 7.6E-80 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 P029_04365 08a9ac1a3414f245134970156fe27e77 124 SMART SM01323 24 109 9.0E-42 T 14-10-2018 IPR003849 Preprotein translocase YajC P029_04365 08a9ac1a3414f245134970156fe27e77 124 Pfam PF02699 Preprotein translocase subunit 29 106 4.3E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC P029_04365 08a9ac1a3414f245134970156fe27e77 124 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 28 109 4.7E-29 T 14-10-2018 IPR003849 Preprotein translocase YajC P029_04365 08a9ac1a3414f245134970156fe27e77 124 PRINTS PR01853 Bacterial YajC preprotein translocase signature 26 46 1.1E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC P029_04365 08a9ac1a3414f245134970156fe27e77 124 PRINTS PR01853 Bacterial YajC preprotein translocase signature 46 64 1.1E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 SUPERFAMILY SSF55315 6 83 4.36E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 SUPERFAMILY SSF75217 92 252 1.52E-44 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 12 251 2.4E-63 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 Gene3D G3DSA:3.40.1280.10 92 253 3.0E-49 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 Pfam PF00588 SpoU rRNA Methylase family 110 249 7.2E-38 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 Gene3D G3DSA:3.30.1330.30 3 83 5.0E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 SMART SM00967 11 87 1.8E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 P029_01170 bbf96453a7d565f0b3dbed9490cea691 258 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 11 82 1.3E-12 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 P029_01620 73e56b76fb6a4eac6f12c9ab1e0cb2d8 930 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 564 758 6.3E-16 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 P029_04685 405306715d7d1042bed098d568427e44 564 Gene3D G3DSA:2.160.20.80 15 110 7.4E-17 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 Pfam PF13599 Pentapeptide repeats (9 copies) 331 412 5.6E-9 T 14-10-2018 IPR001646 Pentapeptide repeat P029_04685 405306715d7d1042bed098d568427e44 564 Pfam PF13599 Pentapeptide repeats (9 copies) 478 539 2.2E-9 T 14-10-2018 IPR001646 Pentapeptide repeat P029_04685 405306715d7d1042bed098d568427e44 564 Pfam PF13599 Pentapeptide repeats (9 copies) 34 96 1.4E-10 T 14-10-2018 IPR001646 Pentapeptide repeat P029_04685 405306715d7d1042bed098d568427e44 564 Pfam PF13599 Pentapeptide repeats (9 copies) 210 276 1.8E-6 T 14-10-2018 IPR001646 Pentapeptide repeat P029_04685 405306715d7d1042bed098d568427e44 564 Pfam PF13599 Pentapeptide repeats (9 copies) 138 198 2.8E-7 T 14-10-2018 IPR001646 Pentapeptide repeat P029_04685 405306715d7d1042bed098d568427e44 564 SUPERFAMILY SSF141571 136 289 1.24E-29 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 Gene3D G3DSA:2.160.20.100 468 554 1.2E-17 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 SUPERFAMILY SSF141571 32 163 2.62E-27 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 SUPERFAMILY SSF141571 364 545 1.1E-24 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 Gene3D G3DSA:2.160.20.100 362 449 1.0E-8 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 Gene3D G3DSA:2.160.20.100 111 226 4.8E-19 T 14-10-2018 P029_04685 405306715d7d1042bed098d568427e44 564 Gene3D G3DSA:2.160.20.80 227 361 1.7E-26 T 14-10-2018 P029_05810 5f6509616fc8866ca68f87177d8ceb36 371 Gene3D G3DSA:3.40.50.300 13 346 6.5E-67 T 14-10-2018 P029_05810 5f6509616fc8866ca68f87177d8ceb36 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 9 365 2.9E-16 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal P029_05810 5f6509616fc8866ca68f87177d8ceb36 371 SUPERFAMILY SSF52540 10 354 1.24E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05810 5f6509616fc8866ca68f87177d8ceb36 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 61.504 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 P029_05810 5f6509616fc8866ca68f87177d8ceb36 371 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 P029_05810 5f6509616fc8866ca68f87177d8ceb36 371 Gene3D G3DSA:1.20.1050.90 125 311 6.5E-67 T 14-10-2018 P029_05165 f2c9504aa15557eb1115deeb28bbb2d8 143 PIRSF PIRSF004638 1 143 9.9E-43 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 P029_05165 f2c9504aa15557eb1115deeb28bbb2d8 143 Pfam PF03653 Uncharacterised protein family (UPF0093) 3 142 9.4E-47 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 402 419 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 129 153 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 31 50 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 252 278 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 153 174 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 350 369 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PRINTS PR01806 Virulence factor MviN signature 50 66 2.6E-53 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 491 9.4E-92 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 PIRSF PIRSF002869 1 500 2.4E-123 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 460 16.098 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_05675 24ad4b57c10d5e70fedf699f4e681916 502 Pfam PF03023 MviN-like protein 26 466 2.4E-87 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ P029_03580 ce71bbeef18fa9b73413c319c4745dae 119 SUPERFAMILY SSF103473 5 85 2.88E-10 T 14-10-2018 IPR036259 MFS transporter superfamily P029_03580 ce71bbeef18fa9b73413c319c4745dae 119 Gene3D G3DSA:1.20.1250.20 2 89 1.9E-9 T 14-10-2018 P029_00385 019c57420c05d68aa59d46e8c3a9f0b4 306 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 1 306 1.8E-145 T 14-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 P029_00385 019c57420c05d68aa59d46e8c3a9f0b4 306 Gene3D G3DSA:3.40.50.970 1 306 2.8E-125 T 14-10-2018 P029_00385 019c57420c05d68aa59d46e8c3a9f0b4 306 Pfam PF00676 Dehydrogenase E1 component 3 297 1.0E-100 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 P029_00385 019c57420c05d68aa59d46e8c3a9f0b4 306 SUPERFAMILY SSF52518 1 306 3.32E-99 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_05650 413e11e0d919f45573e009a19e49c5b3 241 SMART SM00563 73 189 9.9E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P029_05650 413e11e0d919f45573e009a19e49c5b3 241 Pfam PF01553 Acyltransferase 61 186 1.7E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 P029_05650 413e11e0d919f45573e009a19e49c5b3 241 SUPERFAMILY SSF69593 13 238 1.96E-33 T 14-10-2018 P029_04990 2b4b167693d1171ba72a8db1d8bdb08e 417 SUPERFAMILY SSF56925 27 417 1.1E-15 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04990 2b4b167693d1171ba72a8db1d8bdb08e 417 Gene3D G3DSA:2.40.160.20 228 379 2.5E-9 T 14-10-2018 P029_04990 2b4b167693d1171ba72a8db1d8bdb08e 417 Pfam PF01617 Surface antigen 27 417 2.6E-83 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02185 127e3740bde6d1d4da3e5d98c852fad3 273 SUPERFAMILY SSF56219 2 272 3.53E-76 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P029_02185 127e3740bde6d1d4da3e5d98c852fad3 273 Gene3D G3DSA:3.60.10.10 2 273 1.2E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily P029_02185 127e3740bde6d1d4da3e5d98c852fad3 273 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 270 1.7E-67 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 P029_02185 127e3740bde6d1d4da3e5d98c852fad3 273 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 268 1.9E-71 T 14-10-2018 P029_02185 127e3740bde6d1d4da3e5d98c852fad3 273 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 264 6.7E-13 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase P029_02555 07f694fb8ff92e11f796ca89ca9e2045 392 SUPERFAMILY SSF118215 11 380 4.45E-45 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P029_02555 07f694fb8ff92e11f796ca89ca9e2045 392 Pfam PF00375 Sodium:dicarboxylate symporter family 12 381 4.5E-36 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 P029_02555 07f694fb8ff92e11f796ca89ca9e2045 392 Gene3D G3DSA:1.10.3860.10 126 387 3.9E-26 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P029_00505 3313581f85a3e8cc3c1e6b6d4746c39d 244 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 13 242 3.7E-93 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 P029_00505 3313581f85a3e8cc3c1e6b6d4746c39d 244 Pfam PF00696 Amino acid kinase family 15 222 1.1E-25 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P029_00505 3313581f85a3e8cc3c1e6b6d4746c39d 244 Gene3D G3DSA:3.40.1160.10 7 244 8.7E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P029_00505 3313581f85a3e8cc3c1e6b6d4746c39d 244 SUPERFAMILY SSF53633 12 243 6.81E-62 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P029_00505 3313581f85a3e8cc3c1e6b6d4746c39d 244 PIRSF PIRSF005650 8 244 3.5E-86 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 P029_00505 3313581f85a3e8cc3c1e6b6d4746c39d 244 Hamap MF_01220_B Uridylate kinase [pyrH]. 11 243 41.375 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 P029_01100 78a2e9494ba48c764a2456ac0896d85c 293 Pfam PF01145 SPFH domain / Band 7 family 77 238 6.0E-18 T 14-10-2018 IPR001107 Band 7 domain P029_01100 78a2e9494ba48c764a2456ac0896d85c 293 Gene3D G3DSA:3.30.479.30 101 231 2.0E-10 T 14-10-2018 P029_01100 78a2e9494ba48c764a2456ac0896d85c 293 SUPERFAMILY SSF117892 105 232 4.84E-12 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily P029_01100 78a2e9494ba48c764a2456ac0896d85c 293 SMART SM00244 67 229 6.2E-11 T 14-10-2018 IPR001107 Band 7 domain P029_01070 b1f0e18198bb705d7b0509d181295559 151 SUPERFAMILY SSF47323 1 91 7.85E-9 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 P029_01070 b1f0e18198bb705d7b0509d181295559 151 Pfam PF08264 Anticodon-binding domain of tRNA 1 74 3.9E-7 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 P029_00795 a0bb9801829e95adc4d550d4f09603b2 157 Pfam PF06271 RDD family 7 148 7.7E-7 T 14-10-2018 IPR010432 RDD P029_00880 788e11a27956127de27dee398e3bfc4e 424 Gene3D G3DSA:1.25.40.10 265 404 1.9E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_00880 788e11a27956127de27dee398e3bfc4e 424 SUPERFAMILY SSF48452 264 398 1.64E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_00880 788e11a27956127de27dee398e3bfc4e 424 Gene3D G3DSA:3.30.2010.10 26 108 1.4E-6 T 14-10-2018 P029_00880 788e11a27956127de27dee398e3bfc4e 424 Pfam PF01435 Peptidase family M48 34 216 3.4E-28 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 P029_01865 c2dbb09b6338249c77ac8b4e10c80bca 312 Pfam PF01715 IPP transferase 38 277 1.6E-54 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 P029_01865 c2dbb09b6338249c77ac8b4e10c80bca 312 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 5 293 22.772 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 P029_01865 c2dbb09b6338249c77ac8b4e10c80bca 312 Gene3D G3DSA:1.10.20.140 109 179 2.4E-69 T 14-10-2018 P029_01865 c2dbb09b6338249c77ac8b4e10c80bca 312 Gene3D G3DSA:3.40.50.300 9 277 2.4E-69 T 14-10-2018 P029_01865 c2dbb09b6338249c77ac8b4e10c80bca 312 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 279 1.9E-56 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 P029_01865 c2dbb09b6338249c77ac8b4e10c80bca 312 SUPERFAMILY SSF52540 5 148 1.64E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_04985 01da7b4da4cb1fba344c945bdcd6589d 274 SUPERFAMILY SSF56925 27 274 1.23E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04985 01da7b4da4cb1fba344c945bdcd6589d 274 Pfam PF01617 Surface antigen 27 274 3.2E-11 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04985 01da7b4da4cb1fba344c945bdcd6589d 274 Gene3D G3DSA:2.40.160.20 70 247 4.0E-7 T 14-10-2018 P029_03175 771860db21dad5ca346cb1ff5116d0f6 157 Pfam PF04386 Stringent starvation protein B 11 132 5.7E-25 T 14-10-2018 IPR007481 Stringent starvation protein B P029_03175 771860db21dad5ca346cb1ff5116d0f6 157 SUPERFAMILY SSF101738 3 116 2.94E-37 T 14-10-2018 IPR036760 SspB-like superfamily P029_03175 771860db21dad5ca346cb1ff5116d0f6 157 Gene3D G3DSA:2.30.30.220 1 117 7.0E-37 T 14-10-2018 IPR036760 SspB-like superfamily P029_01480 6b39b911456b44af69499c3e0b7141f8 146 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 14 131 6.4E-25 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 SUPERFAMILY SSF55931 13 302 4.12E-114 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 Pfam PF02637 GatB domain 335 481 1.0E-48 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 SMART SM00845 334 481 5.2E-73 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 SUPERFAMILY SSF89095 303 408 1.06E-29 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 150 164 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 Gene3D G3DSA:1.10.10.410 421 483 2.6E-25 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 11 481 5.2E-166 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 11 482 35.837 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 Gene3D G3DSA:1.10.150.380 303 420 3.8E-33 T 14-10-2018 P029_02040 fe081b4022b9d0eb2aec0b5232c417ab 483 Pfam PF02934 GatB/GatE catalytic domain 14 294 1.1E-106 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 P029_02750 1a0e45dc9495afc5e3d39261b254871b 412 Gene3D G3DSA:2.40.160.20 228 378 3.0E-10 T 14-10-2018 P029_02750 1a0e45dc9495afc5e3d39261b254871b 412 Pfam PF01617 Surface antigen 29 412 7.1E-76 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02750 1a0e45dc9495afc5e3d39261b254871b 412 SUPERFAMILY SSF56925 29 412 2.17E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01885 9f9cf9f0962a9379c8361edc9578aa1b 201 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 16 162 2.1E-30 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01885 9f9cf9f0962a9379c8361edc9578aa1b 201 Gene3D G3DSA:1.20.120.1200 3 165 2.4E-35 T 14-10-2018 P029_00115 383613187c9b34e6c86a7eeda487d5f8 252 SUPERFAMILY SSF53335 13 188 8.82E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_00115 383613187c9b34e6c86a7eeda487d5f8 252 Gene3D G3DSA:3.40.50.150 2 198 1.5E-25 T 14-10-2018 P029_00115 383613187c9b34e6c86a7eeda487d5f8 252 Pfam PF08241 Methyltransferase domain 48 137 1.9E-15 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 P029_01035 0bbddbce9c2605e7b132958a49a0a480 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site P029_01035 0bbddbce9c2605e7b132958a49a0a480 232 Pfam PF04002 RadC-like JAB domain 112 230 4.1E-38 T 14-10-2018 IPR025657 RadC-like JAB domain P029_01035 0bbddbce9c2605e7b132958a49a0a480 232 SUPERFAMILY SSF102712 157 198 6.02E-5 T 14-10-2018 P029_01035 0bbddbce9c2605e7b132958a49a0a480 232 Gene3D G3DSA:3.40.140.10 108 232 3.6E-40 T 14-10-2018 P029_01035 0bbddbce9c2605e7b132958a49a0a480 232 SUPERFAMILY SSF47781 37 91 8.01E-6 T 14-10-2018 IPR010994 RuvA domain 2-like P029_01035 0bbddbce9c2605e7b132958a49a0a480 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 19 232 1.3E-52 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 P029_04315 bb1ae43e932b7d03eb88abb162b60efe 231 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 18 33 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 P029_04315 bb1ae43e932b7d03eb88abb162b60efe 231 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 7 230 1.6E-80 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 P029_04315 bb1ae43e932b7d03eb88abb162b60efe 231 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 2 230 35.464 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 P029_04315 bb1ae43e932b7d03eb88abb162b60efe 231 Pfam PF01209 ubiE/COQ5 methyltransferase family 4 230 1.6E-80 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 P029_04315 bb1ae43e932b7d03eb88abb162b60efe 231 Gene3D G3DSA:3.40.50.150 13 231 4.9E-69 T 14-10-2018 P029_04315 bb1ae43e932b7d03eb88abb162b60efe 231 SUPERFAMILY SSF53335 6 229 2.3E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_01415 d72325af89ad3f493fabd00aca9c2948 315 Gene3D G3DSA:3.10.50.40 207 301 2.6E-5 T 14-10-2018 P029_01415 d72325af89ad3f493fabd00aca9c2948 315 SUPERFAMILY SSF54534 223 286 1.75E-6 T 14-10-2018 P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SUPERFAMILY SSF51126 39 230 8.79E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 133 155 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 33 55 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 183 205 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 158 180 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 58 80 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 8 30 5000.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 208 230 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 83 105 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 233 255 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_00915 c7561c18f40f7a0bd206b6709a011fb7 258 SMART SM00710 108 130 2200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat P029_04400 380b7f93c69904c44b121706c89930af 204 SMART SM00474 1 168 2.6E-34 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P029_04400 380b7f93c69904c44b121706c89930af 204 Gene3D G3DSA:3.30.420.10 8 188 3.0E-41 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_04400 380b7f93c69904c44b121706c89930af 204 Pfam PF01612 3'-5' exonuclease 19 168 7.2E-36 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 P029_04400 380b7f93c69904c44b121706c89930af 204 SUPERFAMILY SSF53098 18 190 3.36E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_02360 4b2eb8c62ce5a745c743172859b19f36 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.0E-6 T 14-10-2018 P029_02360 4b2eb8c62ce5a745c743172859b19f36 146 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.0E-6 T 14-10-2018 P029_02360 4b2eb8c62ce5a745c743172859b19f36 146 Pfam PF02416 mttA/Hcf106 family 4 41 1.4E-4 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 P029_03260 c284829bc16f836b7b421d6a8eb7afc1 164 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 12 146 27.756 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03260 c284829bc16f836b7b421d6a8eb7afc1 164 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 104 115 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site P029_03260 c284829bc16f836b7b421d6a8eb7afc1 164 Pfam PF12838 4Fe-4S dicluster domain 64 118 5.2E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain P029_03260 c284829bc16f836b7b421d6a8eb7afc1 164 Gene3D G3DSA:3.30.70.3270 38 163 1.7E-42 T 14-10-2018 P029_03260 c284829bc16f836b7b421d6a8eb7afc1 164 SUPERFAMILY SSF54862 38 146 1.26E-27 T 14-10-2018 P029_03260 c284829bc16f836b7b421d6a8eb7afc1 164 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 21 142 2.6E-51 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_03985 d8a078dfc69f6224df5596be7f76e798 220 SUPERFAMILY SSF52540 11 194 6.02E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_03985 d8a078dfc69f6224df5596be7f76e798 220 Pfam PF00308 Bacterial dnaA protein 83 190 4.2E-6 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA P029_03985 d8a078dfc69f6224df5596be7f76e798 220 Gene3D G3DSA:1.10.8.60 150 215 3.5E-5 T 14-10-2018 P029_03985 d8a078dfc69f6224df5596be7f76e798 220 Gene3D G3DSA:3.40.50.300 28 146 6.2E-14 T 14-10-2018 P029_04595 e5a0f0c87943d5942e332f5e3c9b6f32 123 Pfam PF04956 TrbC/VIRB2 family 3 103 1.3E-16 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_04485 988a02478f35c7e7d6ddf5422d617ffe 76 Pfam PF01617 Surface antigen 9 71 1.5E-18 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04485 988a02478f35c7e7d6ddf5422d617ffe 76 SUPERFAMILY SSF56925 7 46 7.46E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_00110 e864a248ab0d3fb7019e3aae7e704607 392 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 36 385 1.3E-65 T 14-10-2018 IPR006427 Phage portal protein, HK97 P029_00110 e864a248ab0d3fb7019e3aae7e704607 392 Pfam PF04860 Phage portal protein 45 378 3.0E-85 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein P029_02560 d805c087b05cda76ac3ee43ab7ff94ba 399 Pfam PF00375 Sodium:dicarboxylate symporter family 12 378 8.2E-26 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 P029_02560 d805c087b05cda76ac3ee43ab7ff94ba 399 Gene3D G3DSA:1.10.3860.10 4 387 8.5E-19 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P029_02560 d805c087b05cda76ac3ee43ab7ff94ba 399 SUPERFAMILY SSF118215 17 378 1.11E-35 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 P029_00705 c85136bdbe616a656951e2d8fca0b904 403 Gene3D G3DSA:1.20.1720.10 9 390 7.6E-78 T 14-10-2018 P029_00705 c85136bdbe616a656951e2d8fca0b904 403 Pfam PF07690 Major Facilitator Superfamily 14 355 7.0E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 P029_00705 c85136bdbe616a656951e2d8fca0b904 403 SUPERFAMILY SSF103473 8 393 2.09E-57 T 14-10-2018 IPR036259 MFS transporter superfamily P029_00705 c85136bdbe616a656951e2d8fca0b904 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 7 384 3.0E-63 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 P029_02480 682b37241ece8e726a5cc519d1c3f2bf 557 Gene3D G3DSA:3.20.20.540 176 489 1.0E-148 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P029_02480 682b37241ece8e726a5cc519d1c3f2bf 557 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 112 555 1.2E-205 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P029_02480 682b37241ece8e726a5cc519d1c3f2bf 557 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 112 557 94.516 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P029_02480 682b37241ece8e726a5cc519d1c3f2bf 557 Pfam PF13667 ThiC-associated domain 9 77 2.7E-18 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P029_02480 682b37241ece8e726a5cc519d1c3f2bf 557 Pfam PF01964 Radical SAM ThiC family 113 553 1.7E-193 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 434 177.464 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 Pfam PF00709 Adenylosuccinate synthetase 4 422 8.2E-156 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 Gene3D G3DSA:3.90.170.10 266 429 8.5E-58 T 14-10-2018 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 Gene3D G3DSA:1.10.300.10 108 206 4.8E-88 T 14-10-2018 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 SUPERFAMILY SSF52540 1 423 3.19E-154 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 426 1.3E-144 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 SMART SM00788 3 423 3.2E-238 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 P029_01440 87db19760ffd438052ac6c7c96df8ed9 434 Gene3D G3DSA:3.40.440.10 5 255 4.8E-88 T 14-10-2018 P029_02535 0b1dfccc1fd4d21738b27a124f9e6ad3 236 SUPERFAMILY SSF53335 12 234 4.87E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_02535 0b1dfccc1fd4d21738b27a124f9e6ad3 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 229 5.7E-78 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 P029_02535 0b1dfccc1fd4d21738b27a124f9e6ad3 236 Gene3D G3DSA:3.40.50.150 8 235 7.3E-67 T 14-10-2018 P029_02535 0b1dfccc1fd4d21738b27a124f9e6ad3 236 Pfam PF13489 Methyltransferase domain 38 199 4.7E-23 T 14-10-2018 P029_02535 0b1dfccc1fd4d21738b27a124f9e6ad3 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 8 235 36.42 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 P029_01530 74b8d4c0e6b919a72d1d52a1a9684095 165 Gene3D G3DSA:2.40.70.10 44 164 3.4E-32 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily P029_01530 74b8d4c0e6b919a72d1d52a1a9684095 165 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 70 81 - T 14-10-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 P029_01530 74b8d4c0e6b919a72d1d52a1a9684095 165 SUPERFAMILY SSF50630 50 154 6.16E-20 T 14-10-2018 IPR021109 Aspartic peptidase domain superfamily P029_01530 74b8d4c0e6b919a72d1d52a1a9684095 165 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 48 164 9.0E-37 T 14-10-2018 IPR011969 Clan AA aspartic peptidase, C-terminal P029_01530 74b8d4c0e6b919a72d1d52a1a9684095 165 Pfam PF13975 gag-polyprotein putative aspartyl protease 61 150 1.7E-23 T 14-10-2018 P029_02370 e699c7736a383c870b5997bc04b8260c 212 Pfam PF06055 Exopolysaccharide synthesis, ExoD 11 188 1.5E-55 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD P029_02370 e699c7736a383c870b5997bc04b8260c 212 PIRSF PIRSF033239 1 204 1.6E-68 T 14-10-2018 IPR010331 Exopolysaccharide synthesis, ExoD P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 1.1E-123 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 SUPERFAMILY SSF55681 1 280 3.23E-112 T 14-10-2018 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.351 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:1.20.58.180 206 282 1.8E-25 T 14-10-2018 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.3E-49 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.3E-49 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.3E-49 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.3E-49 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.3E-49 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.3E-49 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00060 edf8ab53d06a80576ec92ffc231985d1 283 Gene3D G3DSA:3.30.930.10 1 205 1.8E-92 T 14-10-2018 P029_00715 f048f2e147f62e65fc395baa6724da47 283 SUPERFAMILY SSF55681 1 280 1.24E-111 T 14-10-2018 P029_00715 f048f2e147f62e65fc395baa6724da47 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.7E-48 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.7E-48 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.7E-48 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.7E-48 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 242 258 2.7E-48 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.7E-48 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 Gene3D G3DSA:3.30.930.10 1 205 9.7E-92 T 14-10-2018 P029_00715 f048f2e147f62e65fc395baa6724da47 283 Gene3D G3DSA:1.20.58.180 206 282 1.8E-25 T 14-10-2018 P029_00715 f048f2e147f62e65fc395baa6724da47 283 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 278 1.7E-122 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00715 f048f2e147f62e65fc395baa6724da47 283 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 282 47.023 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 P029_00015 3318d72ebe29651f0ba2d10db95c6ead 263 Pfam PF02405 Permease MlaE 51 260 7.5E-68 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 ProSitePatterns PS01057 SAICAR synthetase signature 1. 88 102 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 Gene3D G3DSA:3.30.470.20 87 225 1.4E-90 T 14-10-2018 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 5 239 30.46 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 SUPERFAMILY SSF56104 5 237 3.01E-74 T 14-10-2018 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 213 1.0E-68 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 Gene3D G3DSA:3.30.200.20 8 236 1.4E-90 T 14-10-2018 P029_00545 fdb50109bc7bd5991d9762102b7fddb7 244 Pfam PF01259 SAICAR synthetase 8 236 4.9E-59 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 P029_01470 76e719f989d51999541f6ec5edadc0f0 99 Pfam PF03334 Na+/H+ antiporter subunit 11 88 2.2E-19 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 P029_01615 2f77c8bd2d697d135083018d0d0c1116 853 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 556 663 4.0E-10 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 P029_04705 2b0182fc2c53ad29de4517d34d3b72da 262 Pfam PF00899 ThiF family 5 239 1.4E-65 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 P029_04705 2b0182fc2c53ad29de4517d34d3b72da 262 Gene3D G3DSA:3.40.50.720 1 247 4.8E-82 T 14-10-2018 P029_04705 2b0182fc2c53ad29de4517d34d3b72da 262 SUPERFAMILY SSF69572 3 242 1.27E-80 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 P029_05460 657cbaa738cdfa61a0c2eafa7c60f400 226 SUPERFAMILY SSF56925 104 226 3.92E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05460 657cbaa738cdfa61a0c2eafa7c60f400 226 Gene3D G3DSA:2.40.160.20 4 187 4.8E-10 T 14-10-2018 P029_05460 657cbaa738cdfa61a0c2eafa7c60f400 226 Pfam PF01617 Surface antigen 65 226 5.6E-53 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02455 9df19aacf479c7e141cdc62b1b319a6c 111 Pfam PF03091 CutA1 divalent ion tolerance protein 7 103 9.7E-33 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 P029_02455 9df19aacf479c7e141cdc62b1b319a6c 111 SUPERFAMILY SSF54913 2 106 5.19E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta P029_02455 9df19aacf479c7e141cdc62b1b319a6c 111 Gene3D G3DSA:3.30.70.120 1 105 2.4E-35 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal P029_03755 bc45fd565d81d640130bc98595af9752 275 SUPERFAMILY SSF74653 175 272 2.35E-9 T 14-10-2018 P029_03755 bc45fd565d81d640130bc98595af9752 275 Gene3D G3DSA:3.30.1150.10 166 274 1.2E-16 T 14-10-2018 P029_05095 e49800fdf934c9ec640bf15e0585954e 115 Gene3D G3DSA:3.10.590.10 2 115 1.1E-34 T 14-10-2018 P029_05095 e49800fdf934c9ec640bf15e0585954e 115 SUPERFAMILY SSF88697 6 114 1.16E-34 T 14-10-2018 IPR015947 PUA-like superfamily P029_05095 e49800fdf934c9ec640bf15e0585954e 115 Pfam PF01878 EVE domain 6 112 1.4E-28 T 14-10-2018 IPR002740 EVE domain P029_05290 0e8d14b1e5015869c546513dc995196e 182 SUPERFAMILY SSF52833 10 158 1.1E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_05290 0e8d14b1e5015869c546513dc995196e 182 Gene3D G3DSA:3.40.30.10 37 174 3.1E-10 T 14-10-2018 P029_05290 0e8d14b1e5015869c546513dc995196e 182 Pfam PF00578 AhpC/TSA family 53 134 8.1E-6 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 Pfam PF01327 Polypeptide deformylase 13 171 2.4E-35 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 PIRSF PIRSF004749 3 185 9.5E-33 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 PRINTS PR01576 Peptide deformylase signature 121 139 1.4E-20 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 PRINTS PR01576 Peptide deformylase signature 140 169 1.4E-20 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 PRINTS PR01576 Peptide deformylase signature 34 63 1.4E-20 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 PRINTS PR01576 Peptide deformylase signature 108 119 1.4E-20 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 SUPERFAMILY SSF56420 13 173 2.75E-39 T 14-10-2018 IPR036821 Peptide deformylase superfamily P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 Hamap MF_00163 Peptide deformylase [def]. 2 186 20.81 T 14-10-2018 IPR023635 Peptide deformylase P029_04045 abe520b0f405702d20d59afdb0ead2ba 197 Gene3D G3DSA:3.90.45.10 1 185 2.7E-41 T 14-10-2018 IPR036821 Peptide deformylase superfamily P029_04030 68b527435ca78662233452a739edf737 90 Gene3D G3DSA:3.30.300.90 1 87 5.4E-19 T 14-10-2018 P029_04030 68b527435ca78662233452a739edf737 90 Pfam PF01722 BolA-like protein 13 87 1.1E-18 T 14-10-2018 IPR002634 BolA protein P029_04030 68b527435ca78662233452a739edf737 90 PIRSF PIRSF003113 1 90 3.1E-19 T 14-10-2018 IPR002634 BolA protein P029_04030 68b527435ca78662233452a739edf737 90 SUPERFAMILY SSF82657 4 88 8.89E-18 T 14-10-2018 IPR036065 BolA-like superfamily P029_01140 90d6d78863fb3ae56b4905961dd04692 166 ProSitePatterns PS00801 Transketolase signature 1. 15 35 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P029_01140 90d6d78863fb3ae56b4905961dd04692 166 SUPERFAMILY SSF52518 5 154 1.95E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold P029_01140 90d6d78863fb3ae56b4905961dd04692 166 Gene3D G3DSA:3.40.50.970 3 158 8.7E-59 T 14-10-2018 P029_01140 90d6d78863fb3ae56b4905961dd04692 166 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 9 155 3.6E-66 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 P029_01485 6a7a3a0fbeabc9ac2cac4c96c95c8bf0 105 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 11 103 1.1E-17 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like P029_02795 cf28c4219d95b6114156b63351af45db 130 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 1.1E-60 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 P029_02795 cf28c4219d95b6114156b63351af45db 130 Pfam PF01592 NifU-like N terminal domain 3 126 7.6E-47 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 P029_02795 cf28c4219d95b6114156b63351af45db 130 Gene3D G3DSA:3.90.1010.10 1 128 2.3E-50 T 14-10-2018 P029_02795 cf28c4219d95b6114156b63351af45db 130 SUPERFAMILY SSF82649 2 125 2.88E-43 T 14-10-2018 P029_05215 67f8b84e54d56798d7f7ffdf202681cb 420 Pfam PF01617 Surface antigen 27 420 2.0E-82 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05215 67f8b84e54d56798d7f7ffdf202681cb 420 SUPERFAMILY SSF56925 27 420 1.6E-15 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05215 67f8b84e54d56798d7f7ffdf202681cb 420 Gene3D G3DSA:2.40.160.20 196 382 2.4E-9 T 14-10-2018 P029_00170 db957e498339bd56f45c761a9a6c35af 102 PRINTS PR01651 Protein-export SecG membrane protein signature 53 75 4.5E-10 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P029_00170 db957e498339bd56f45c761a9a6c35af 102 PRINTS PR01651 Protein-export SecG membrane protein signature 1 20 4.5E-10 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P029_00170 db957e498339bd56f45c761a9a6c35af 102 PRINTS PR01651 Protein-export SecG membrane protein signature 20 34 4.5E-10 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P029_00170 db957e498339bd56f45c761a9a6c35af 102 Pfam PF03840 Preprotein translocase SecG subunit 2 70 1.8E-15 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P029_00170 db957e498339bd56f45c761a9a6c35af 102 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 1 70 4.4E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 P029_04375 050ba1f93d0a03d59f2af604ec27a984 269 SUPERFAMILY SSF52402 3 70 3.27E-17 T 14-10-2018 P029_04375 050ba1f93d0a03d59f2af604ec27a984 269 Gene3D G3DSA:3.40.50.620 1 94 6.9E-19 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_04375 050ba1f93d0a03d59f2af604ec27a984 269 Pfam PF01171 PP-loop family 3 64 4.5E-16 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 P029_01630 7d3ca9ad91f8eb04668141a4d7e349a7 9935 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 298 495 6.0E-14 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 P029_02465 0e216a3280e152f8e2e2f6e7ee02ae60 218 SUPERFAMILY SSF53335 30 216 1.98E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_02465 0e216a3280e152f8e2e2f6e7ee02ae60 218 Pfam PF01596 O-methyltransferase 34 216 4.9E-37 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 P029_02465 0e216a3280e152f8e2e2f6e7ee02ae60 218 Gene3D G3DSA:3.40.50.150 1 218 3.7E-66 T 14-10-2018 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 317 7.4E-31 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 117 3.9E-18 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 SMART SM00859 4 120 6.8E-10 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 SUPERFAMILY SSF55347 132 317 7.97E-53 T 14-10-2018 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 Gene3D G3DSA:3.40.50.720 5 330 4.7E-97 T 14-10-2018 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 Gene3D G3DSA:3.30.360.10 131 315 4.7E-97 T 14-10-2018 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 PIRSF PIRSF000148 2 337 1.2E-94 T 14-10-2018 P029_05540 5835f7f5472b8989c50b7877a6fef7bc 337 SUPERFAMILY SSF51735 5 158 3.52E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_05640 fdd0ecd95310f30db7dddc62f743b191 290 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 109 281 4.3E-63 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 P029_05640 fdd0ecd95310f30db7dddc62f743b191 290 SMART SM00987 122 275 3.4E-36 T 14-10-2018 P029_05640 fdd0ecd95310f30db7dddc62f743b191 290 SMART SM00986 122 275 3.4E-36 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P029_05640 fdd0ecd95310f30db7dddc62f743b191 290 SUPERFAMILY SSF52141 97 282 2.62E-56 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P029_05640 fdd0ecd95310f30db7dddc62f743b191 290 Pfam PF03167 Uracil DNA glycosylase superfamily 123 275 1.6E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P029_05640 fdd0ecd95310f30db7dddc62f743b191 290 Gene3D G3DSA:3.40.470.10 82 284 1.5E-60 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.4E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 Gene3D G3DSA:3.40.50.720 6 220 1.3E-35 T 14-10-2018 P029_00255 737a33e9a20186a1109b732530b51a31 236 Pfam PF00106 short chain dehydrogenase 9 190 3.7E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 SUPERFAMILY SSF51735 8 200 2.46E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_00255 737a33e9a20186a1109b732530b51a31 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 1.8E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_01750 358990267ee9042f06c165feb834ad67 189 SUPERFAMILY SSF50022 39 183 1.31E-40 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P029_01750 358990267ee9042f06c165feb834ad67 189 Pfam PF00355 Rieske [2Fe-2S] domain 66 169 4.1E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 P029_01750 358990267ee9042f06c165feb834ad67 189 Gene3D G3DSA:2.102.10.10 51 183 5.1E-52 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 P029_01750 358990267ee9042f06c165feb834ad67 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 155 167 3.9E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 P029_01750 358990267ee9042f06c165feb834ad67 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 3.9E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 P029_01750 358990267ee9042f06c165feb834ad67 189 PRINTS PR00162 Rieske 2Fe-2S subunit signature 143 155 3.9E-16 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 P029_01750 358990267ee9042f06c165feb834ad67 189 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 19 183 2.9E-61 T 14-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 P029_05735 4f103f691e650622b0f26f0fd70ac8f2 342 Pfam PF01617 Surface antigen 33 328 2.3E-51 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05735 4f103f691e650622b0f26f0fd70ac8f2 342 SUPERFAMILY SSF56925 33 324 1.26E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01950 a5764102fcbfcfc56690adaab653b38b 75 Gene3D G3DSA:2.40.30.10 5 68 6.3E-12 T 14-10-2018 P029_01950 a5764102fcbfcfc56690adaab653b38b 75 SUPERFAMILY SSF50447 9 53 4.24E-7 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily P029_02265 7894fdcc5ba4a598ab82f4cbb2cc0d16 86 Gene3D G3DSA:1.10.730.10 1 77 2.2E-9 T 14-10-2018 P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 SUPERFAMILY SSF53383 14 417 9.85E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 Gene3D G3DSA:3.40.640.10 61 324 1.7E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 274 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 PIRSF PIRSF000521 27 421 8.2E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 Gene3D G3DSA:3.90.1150.10 11 407 1.7E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 Pfam PF00202 Aminotransferase class-III 26 416 1.6E-106 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 P029_02085 ea03124b9d065c9640e452e8dc57baf7 423 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 417 9.3E-137 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 P029_01855 f566712364056b7c78c45098dec52e8a 443 Pfam PF02646 RmuC family 135 434 2.1E-92 T 14-10-2018 IPR003798 DNA recombination RmuC P029_00440 cf5e726667835bec6c0fb1d5434a31a6 219 Pfam PF02223 Thymidylate kinase 5 177 1.8E-43 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 P029_00440 cf5e726667835bec6c0fb1d5434a31a6 219 SUPERFAMILY SSF52540 1 190 3.96E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00440 cf5e726667835bec6c0fb1d5434a31a6 219 ProSitePatterns PS01331 Thymidylate kinase signature. 92 104 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 P029_00440 cf5e726667835bec6c0fb1d5434a31a6 219 Hamap MF_00165 Thymidylate kinase [tmk]. 1 206 25.5 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 P029_00440 cf5e726667835bec6c0fb1d5434a31a6 219 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 178 1.2E-48 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 P029_00440 cf5e726667835bec6c0fb1d5434a31a6 219 Gene3D G3DSA:3.40.50.300 1 204 1.0E-56 T 14-10-2018 P029_02240 52f9ad1e45dba7d0173ac646a29f4e6c 141 SUPERFAMILY SSF82093 29 131 5.62E-31 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 P029_02240 52f9ad1e45dba7d0173ac646a29f4e6c 141 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 28.276 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 P029_02240 52f9ad1e45dba7d0173ac646a29f4e6c 141 Gene3D G3DSA:2.40.50.140 29 133 9.1E-31 T 14-10-2018 P029_02240 52f9ad1e45dba7d0173ac646a29f4e6c 141 Pfam PF03100 CcmE 3 128 9.1E-37 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 P029_00875 f6bd13af68c9f389a33df4a21f13c62f 127 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 8.3E-31 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS P029_00875 f6bd13af68c9f389a33df4a21f13c62f 127 SUPERFAMILY SSF81301 5 106 1.26E-31 T 14-10-2018 P029_00875 f6bd13af68c9f389a33df4a21f13c62f 127 Pfam PF02410 Ribosomal silencing factor during starvation 12 104 7.6E-26 T 14-10-2018 P029_00875 f6bd13af68c9f389a33df4a21f13c62f 127 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 5 105 21.924 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS P029_00875 f6bd13af68c9f389a33df4a21f13c62f 127 Gene3D G3DSA:3.30.460.10 3 117 8.8E-34 T 14-10-2018 P029_02225 8ae8d0e989dd442ed6ec19900f3deb3d 174 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 6 165 40.525 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02225 8ae8d0e989dd442ed6ec19900f3deb3d 174 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 51 159 8.8E-25 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02225 8ae8d0e989dd442ed6ec19900f3deb3d 174 Gene3D G3DSA:3.40.50.12280 5 173 3.0E-77 T 14-10-2018 P029_02225 8ae8d0e989dd442ed6ec19900f3deb3d 174 SUPERFAMILY SSF56770 28 167 1.44E-65 T 14-10-2018 P029_02225 8ae8d0e989dd442ed6ec19900f3deb3d 174 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 132 148 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02225 8ae8d0e989dd442ed6ec19900f3deb3d 174 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 30 165 3.3E-76 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_00165 7f6dcc36acad94dd92ef59332651d410 541 Gene3D G3DSA:3.40.50.880 290 541 1.9E-89 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_00165 7f6dcc36acad94dd92ef59332651d410 541 SUPERFAMILY SSF52317 294 535 4.43E-72 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like P029_00165 7f6dcc36acad94dd92ef59332651d410 541 Pfam PF00117 Glutamine amidotransferase class-I 307 528 8.3E-51 T 14-10-2018 IPR017926 Glutamine amidotransferase P029_00165 7f6dcc36acad94dd92ef59332651d410 541 Hamap MF_01227 CTP synthase [pyrG]. 8 535 46.171 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 P029_00165 7f6dcc36acad94dd92ef59332651d410 541 TIGRFAM TIGR00337 PyrG: CTP synthase 8 529 6.3E-215 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 P029_00165 7f6dcc36acad94dd92ef59332651d410 541 SUPERFAMILY SSF52540 8 275 6.76E-113 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_00165 7f6dcc36acad94dd92ef59332651d410 541 Pfam PF06418 CTP synthase N-terminus 9 270 1.0E-114 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 P029_00165 7f6dcc36acad94dd92ef59332651d410 541 Gene3D G3DSA:3.40.50.300 6 289 3.1E-119 T 14-10-2018 P029_00300 d4acd971906f9df3896f82be7451558d 76 Gene3D G3DSA:1.10.287.110 11 75 4.6E-21 T 14-10-2018 IPR036869 Chaperone J-domain superfamily P029_00300 d4acd971906f9df3896f82be7451558d 76 SUPERFAMILY SSF46565 20 74 3.79E-15 T 14-10-2018 IPR036869 Chaperone J-domain superfamily P029_00300 d4acd971906f9df3896f82be7451558d 76 SMART SM00271 23 76 7.9E-6 T 14-10-2018 IPR001623 DnaJ domain P029_00300 d4acd971906f9df3896f82be7451558d 76 Pfam PF00226 DnaJ domain 27 56 1.1E-7 T 14-10-2018 IPR001623 DnaJ domain P029_02060 decbfedfc17573d20ab49b08e91284c6 269 PIRSF PIRSF000094 1 256 2.4E-108 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 P029_02060 decbfedfc17573d20ab49b08e91284c6 269 SUPERFAMILY SSF51735 2 251 9.83E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily P029_02060 decbfedfc17573d20ab49b08e91284c6 269 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 248 7.4E-86 T 14-10-2018 P029_02060 decbfedfc17573d20ab49b08e91284c6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02060 decbfedfc17573d20ab49b08e91284c6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02060 decbfedfc17573d20ab49b08e91284c6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02060 decbfedfc17573d20ab49b08e91284c6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02060 decbfedfc17573d20ab49b08e91284c6 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR P029_02060 decbfedfc17573d20ab49b08e91284c6 269 Gene3D G3DSA:3.40.50.720 1 269 3.4E-64 T 14-10-2018 P029_01205 333c592d4602e2aa022ab74e490c2d86 96 SUPERFAMILY SSF54189 2 93 1.26E-20 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 P029_01205 333c592d4602e2aa022ab74e490c2d86 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 15.568 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 P029_01205 333c592d4602e2aa022ab74e490c2d86 96 Pfam PF00276 Ribosomal protein L23 7 91 1.8E-18 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 P029_01205 333c592d4602e2aa022ab74e490c2d86 96 Gene3D G3DSA:3.30.70.330 1 96 1.9E-18 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 72 2.0E-16 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 Pfam PF00298 Ribosomal protein L11, RNA binding domain 80 145 2.4E-21 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 SUPERFAMILY SSF46906 74 146 4.45E-22 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 Gene3D G3DSA:3.30.1550.10 4 79 1.9E-21 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 Gene3D G3DSA:1.10.10.2720 80 148 2.3E-25 T 14-10-2018 P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 7 146 4.4E-45 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 SUPERFAMILY SSF54747 7 77 2.88E-17 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 ProSitePatterns PS00359 Ribosomal protein L11 signature. 132 147 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 SMART SM00649 10 146 1.0E-50 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 P029_04140 935c8f7fbea9d1224f886d4bd6b24b53 148 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 147 25.609 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 P029_02825 5e68fe7a129cb390656d5f2857d4f3d1 879 SUPERFAMILY SSF51445 439 633 1.4E-5 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily P029_02825 5e68fe7a129cb390656d5f2857d4f3d1 879 Pfam PF13550 Putative phage tail protein 701 845 1.7E-15 T 14-10-2018 IPR032876 Tip attachment protein J P029_02825 5e68fe7a129cb390656d5f2857d4f3d1 879 Pfam PF13547 GTA TIM-barrel-like domain 391 637 4.2E-32 T 14-10-2018 IPR025195 GTA TIM-barrel-like domain P029_00665 2e2e7e6b2973b9e0868d3455680cf17d 125 Pfam PF01491 Frataxin-like domain 29 124 3.3E-15 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 P029_00665 2e2e7e6b2973b9e0868d3455680cf17d 125 Gene3D G3DSA:3.30.920.10 28 125 1.9E-14 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 P029_00665 2e2e7e6b2973b9e0868d3455680cf17d 125 SUPERFAMILY SSF55387 14 124 1.27E-22 T 14-10-2018 P029_00665 2e2e7e6b2973b9e0868d3455680cf17d 125 SMART SM01219 22 125 4.6E-23 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 P029_02590 ef29a3b7097a124b28d54b21251b0078 269 Gene3D G3DSA:3.40.50.150 1 198 1.9E-61 T 14-10-2018 P029_02590 ef29a3b7097a124b28d54b21251b0078 269 SMART SM00650 22 194 8.0E-54 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 P029_02590 ef29a3b7097a124b28d54b21251b0078 269 Gene3D G3DSA:1.10.8.100 201 260 1.3E-16 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 P029_02590 ef29a3b7097a124b28d54b21251b0078 269 SUPERFAMILY SSF53335 6 262 7.06E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_02590 ef29a3b7097a124b28d54b21251b0078 269 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 261 1.8E-53 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm P029_02590 ef29a3b7097a124b28d54b21251b0078 269 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 7 261 7.3E-74 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 P029_02590 ef29a3b7097a124b28d54b21251b0078 269 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 6 262 48.506 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 P029_02590 ef29a3b7097a124b28d54b21251b0078 269 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 38 66 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 P029_02035 e5a94e6bf5fbe18b8cf1ca8b9a74746d 461 Gene3D G3DSA:3.40.630.150 183 461 1.3E-108 T 14-10-2018 P029_02035 e5a94e6bf5fbe18b8cf1ca8b9a74746d 461 Pfam PF05292 Malonyl-CoA decarboxylase C-terminal domain 184 431 1.8E-103 T 14-10-2018 IPR007956 Malonyl-CoA decarboxylase, C-terminal GO:0006633|GO:0050080 KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P029_02035 e5a94e6bf5fbe18b8cf1ca8b9a74746d 461 Pfam PF17408 Malonyl-CoA decarboxylase N-terminal domain 94 181 2.2E-20 T 14-10-2018 IPR035372 Malonyl-CoA decarboxylase, N-terminal KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P029_02035 e5a94e6bf5fbe18b8cf1ca8b9a74746d 461 Gene3D G3DSA:1.20.140.90 46 182 7.5E-20 T 14-10-2018 IPR038351 Malonyl-CoA decarboxylase, N-terminal domain superfamily KEGG: 00410+4.1.1.9|KEGG: 00640+4.1.1.9|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 P029_00345 72ade359f4c5f4b32859437ed28f6702 182 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 181 1.0E-35 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 P029_00345 72ade359f4c5f4b32859437ed28f6702 182 Gene3D G3DSA:3.40.50.150 1 182 2.7E-44 T 14-10-2018 P029_00345 72ade359f4c5f4b32859437ed28f6702 182 SUPERFAMILY SSF53335 2 180 5.2E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase P029_00345 72ade359f4c5f4b32859437ed28f6702 182 PIRSF PIRSF004553 1 182 9.3E-49 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 P029_00345 72ade359f4c5f4b32859437ed28f6702 182 Pfam PF03602 Conserved hypothetical protein 95 2 180 7.8E-39 T 14-10-2018 P029_05500 bf18b8052ebecbcb947c677ea2aef998 412 Gene3D G3DSA:1.25.40.10 99 378 1.0E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_05500 bf18b8052ebecbcb947c677ea2aef998 412 SUPERFAMILY SSF48452 115 343 1.33E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 81 513 6.2E-114 T 14-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 492 512 2.5E-31 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 383 2.5E-31 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 477 492 2.5E-31 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 87 110 2.5E-31 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 129 149 2.5E-31 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 P029_04200 2df1c187bc2b149c1e0269ab47948a93 513 Pfam PF13437 HlyD family secretion protein 349 424 2.3E-7 T 14-10-2018 P029_04565 fcbfccf3bb97debcb76b4a26522c83d9 119 Pfam PF04956 TrbC/VIRB2 family 7 99 1.0E-16 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_03945 850eeacb80acfb2f7928f086470811de 56 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 44 5.3E-17 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 P029_03945 850eeacb80acfb2f7928f086470811de 56 Pfam PF02416 mttA/Hcf106 family 3 44 5.6E-12 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 P029_03945 850eeacb80acfb2f7928f086470811de 56 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 51 17.144 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 P029_03150 a939fa9376a1a5245f45565a14a1e91b 300 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 173 227 3.1E-13 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 P029_03150 a939fa9376a1a5245f45565a14a1e91b 300 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 211 5.9E-65 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_03150 a939fa9376a1a5245f45565a14a1e91b 300 SUPERFAMILY SSF55120 2 215 5.76E-69 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_03150 a939fa9376a1a5245f45565a14a1e91b 300 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 298 17.078 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 P029_03150 a939fa9376a1a5245f45565a14a1e91b 300 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 26 172 3.4E-48 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 P029_03150 a939fa9376a1a5245f45565a14a1e91b 300 Gene3D G3DSA:3.30.2350.10 1 234 4.8E-77 T 14-10-2018 P029_01830 6646c81569d4c2fcc99580200f5ae23a 327 TIGRFAM TIGR00761 argB: acetylglutamate kinase 50 297 8.9E-50 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P029_01830 6646c81569d4c2fcc99580200f5ae23a 327 PIRSF PIRSF000728 34 321 2.8E-78 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 P029_01830 6646c81569d4c2fcc99580200f5ae23a 327 Pfam PF00696 Amino acid kinase family 50 243 2.7E-20 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 P029_01830 6646c81569d4c2fcc99580200f5ae23a 327 SUPERFAMILY SSF53633 28 321 3.21E-61 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P029_01830 6646c81569d4c2fcc99580200f5ae23a 327 Gene3D G3DSA:3.40.1160.10 28 325 4.0E-63 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily P029_00290 cb12ae22e6110b38cfd00de26dbd31f1 105 SUPERFAMILY SSF55424 5 100 9.97E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_00290 cb12ae22e6110b38cfd00de26dbd31f1 105 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 4 94 8.6E-22 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 P029_00290 cb12ae22e6110b38cfd00de26dbd31f1 105 Gene3D G3DSA:3.30.390.30 1 104 2.6E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 P029_04065 68f76e4c545824ef3602f5f965866179 378 Gene3D G3DSA:3.40.640.10 60 279 3.3E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 P029_04065 68f76e4c545824ef3602f5f965866179 378 Pfam PF00155 Aminotransferase class I and II 44 363 2.2E-43 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 P029_04065 68f76e4c545824ef3602f5f965866179 378 SUPERFAMILY SSF53383 26 366 2.26E-87 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase P029_04065 68f76e4c545824ef3602f5f965866179 378 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 228 237 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 P029_04065 68f76e4c545824ef3602f5f965866179 378 Gene3D G3DSA:3.90.1150.10 44 360 3.3E-97 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 P029_00250 3db7bafa3c5c9b8544d5324fcba0073e 96 SUPERFAMILY SSF54565 3 80 2.49E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00250 3db7bafa3c5c9b8544d5324fcba0073e 96 Pfam PF00886 Ribosomal protein S16 9 70 2.9E-25 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00250 3db7bafa3c5c9b8544d5324fcba0073e 96 Gene3D G3DSA:3.30.1320.10 1 96 1.2E-31 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00250 3db7bafa3c5c9b8544d5324fcba0073e 96 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 23.903 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_00250 3db7bafa3c5c9b8544d5324fcba0073e 96 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 79 2.7E-29 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 P029_02815 4d168fd7836a72108c338f790bd0a0c1 116 Gene3D G3DSA:3.10.20.30 1 115 2.4E-43 T 14-10-2018 IPR012675 Beta-grasp domain superfamily P029_02815 4d168fd7836a72108c338f790bd0a0c1 116 PRINTS PR00355 Adrenodoxin signature 84 92 8.2E-5 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 P029_02815 4d168fd7836a72108c338f790bd0a0c1 116 PRINTS PR00355 Adrenodoxin signature 39 49 8.2E-5 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 P029_02815 4d168fd7836a72108c338f790bd0a0c1 116 SUPERFAMILY SSF54292 1 104 4.22E-30 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 P029_02815 4d168fd7836a72108c338f790bd0a0c1 116 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 39 49 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 P029_02815 4d168fd7836a72108c338f790bd0a0c1 116 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 93 3.2E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 P029_04070 1aa9225881d64d3be5c97d01dbd60072 62 Pfam PF01617 Surface antigen 6 62 3.1E-10 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00615 fc04ddd1f8bfa1efd6506f308fea7f01 166 Gene3D G3DSA:3.40.30.10 30 166 1.4E-25 T 14-10-2018 P029_00615 fc04ddd1f8bfa1efd6506f308fea7f01 166 Pfam PF08534 Redoxin 35 151 9.4E-9 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 P029_00615 fc04ddd1f8bfa1efd6506f308fea7f01 166 SUPERFAMILY SSF52833 43 165 1.66E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_02220 e4d3dce136587f7eb0a8a311ecba1e67 122 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 5 122 16.785 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 P029_02220 e4d3dce136587f7eb0a8a311ecba1e67 122 Gene3D G3DSA:1.20.58.1610 3 122 6.1E-35 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02220 e4d3dce136587f7eb0a8a311ecba1e67 122 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 121 1.2E-31 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_05275 7c6afde19d90a1261d976acb838cd2d1 235 Gene3D G3DSA:3.90.550.10 3 233 4.3E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P029_05275 7c6afde19d90a1261d976acb838cd2d1 235 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 231 3.2E-42 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 P029_05275 7c6afde19d90a1261d976acb838cd2d1 235 SUPERFAMILY SSF53448 5 231 9.24E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases P029_04940 acd002cfeae127cfb0c9f3dc00c902f2 88 Pfam PF03937 Flavinator of succinate dehydrogenase 10 81 1.9E-21 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase P029_04940 acd002cfeae127cfb0c9f3dc00c902f2 88 Gene3D G3DSA:1.10.150.250 5 88 8.3E-21 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily P029_04940 acd002cfeae127cfb0c9f3dc00c902f2 88 SUPERFAMILY SSF109910 6 82 8.76E-22 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily P029_04335 68ceb008090ad56d2911c8264223271e 149 SUPERFAMILY SSF56925 40 131 4.32E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04335 68ceb008090ad56d2911c8264223271e 149 Pfam PF01617 Surface antigen 55 137 1.9E-20 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02585 d1c26010d91472d0fe3641280ffc9c65 108 Pfam PF05258 Protein of unknown function (DUF721) 13 106 6.0E-17 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 P029_02205 745aa78ecb67a226527984fd0b6a4e3b 220 Pfam PF01713 Smr domain 123 206 2.2E-17 T 14-10-2018 IPR002625 Smr domain P029_02205 745aa78ecb67a226527984fd0b6a4e3b 220 SUPERFAMILY SSF160443 120 206 4.58E-15 T 14-10-2018 IPR036063 Smr domain superfamily P029_02205 745aa78ecb67a226527984fd0b6a4e3b 220 Gene3D G3DSA:3.30.1370.110 79 211 9.5E-29 T 14-10-2018 P029_04635 44df16ce4b186d31f0f878a4244cd0b5 368 Pfam PF01145 SPFH domain / Band 7 family 76 262 1.2E-22 T 14-10-2018 IPR001107 Band 7 domain P029_04635 44df16ce4b186d31f0f878a4244cd0b5 368 TIGRFAM TIGR01933 hflK: HflK protein 74 350 7.9E-79 T 14-10-2018 IPR010201 HflK GO:0016021 P029_04635 44df16ce4b186d31f0f878a4244cd0b5 368 SMART SM00244 72 249 4.2E-24 T 14-10-2018 IPR001107 Band 7 domain P029_04635 44df16ce4b186d31f0f878a4244cd0b5 368 Gene3D G3DSA:3.30.479.30 134 240 3.6E-18 T 14-10-2018 P029_04635 44df16ce4b186d31f0f878a4244cd0b5 368 SUPERFAMILY SSF117892 140 255 1.31E-18 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily P029_01775 8eaf550eaa666f3f041c87bde071fbee 557 Pfam PF13609 Gram-negative porin 64 511 2.6E-11 T 14-10-2018 P029_01775 8eaf550eaa666f3f041c87bde071fbee 557 Gene3D G3DSA:2.40.160.10 241 557 3.0E-7 T 14-10-2018 IPR023614 Porin domain superfamily P029_01775 8eaf550eaa666f3f041c87bde071fbee 557 SUPERFAMILY SSF56935 245 557 3.66E-12 T 14-10-2018 P029_02840 b4604785a267dc5d37f4802f877927b1 135 Pfam PF03918 Cytochrome C biogenesis protein 17 131 1.7E-25 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family P029_02840 b4604785a267dc5d37f4802f877927b1 135 Gene3D G3DSA:1.10.8.640 20 102 4.1E-19 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily P029_00610 a3fee926be00fdc3f808e1d9fdaa0a48 78 PIRSF PIRSF003113 3 78 1.4E-17 T 14-10-2018 IPR002634 BolA protein P029_00610 a3fee926be00fdc3f808e1d9fdaa0a48 78 Pfam PF01722 BolA-like protein 29 71 2.5E-13 T 14-10-2018 IPR002634 BolA protein P029_00610 a3fee926be00fdc3f808e1d9fdaa0a48 78 Gene3D G3DSA:3.30.300.90 5 73 2.3E-25 T 14-10-2018 P029_00610 a3fee926be00fdc3f808e1d9fdaa0a48 78 SUPERFAMILY SSF82657 6 72 2.49E-18 T 14-10-2018 IPR036065 BolA-like superfamily P029_05345 03389b80a11a5eded15dbb97ddc3d060 360 Pfam PF01617 Surface antigen 39 340 3.2E-49 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05345 03389b80a11a5eded15dbb97ddc3d060 360 SUPERFAMILY SSF56925 39 336 3.7E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_02310 c742da803cd2985e77a6b0311770c97a 122 Pfam PF02096 60Kd inner membrane protein 51 117 1.8E-17 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 P029_01900 e6249baca09e1184084299b9aa51de91 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 51 75 1.8E-42 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01900 e6249baca09e1184084299b9aa51de91 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 21 40 1.8E-42 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01900 e6249baca09e1184084299b9aa51de91 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 264 290 1.8E-42 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01900 e6249baca09e1184084299b9aa51de91 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 124 148 1.8E-42 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01900 e6249baca09e1184084299b9aa51de91 382 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 212 231 1.8E-42 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01900 e6249baca09e1184084299b9aa51de91 382 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 1 371 4.5E-127 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_01900 e6249baca09e1184084299b9aa51de91 382 Pfam PF00361 Proton-conducting membrane transporter 19 306 1.1E-61 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_04195 579893a88886d916f6c714a91ac2b181 234 Gene3D G3DSA:1.10.357.10 25 208 4.1E-10 T 14-10-2018 P029_04195 579893a88886d916f6c714a91ac2b181 234 Pfam PF08511 COQ9 137 212 1.3E-25 T 14-10-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 P029_04195 579893a88886d916f6c714a91ac2b181 234 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 32 216 3.0E-39 T 14-10-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 P029_00105 baf48dbe04fd234467e56c3ddd6b4b54 156 Pfam PF04586 Caudovirus prohead serine protease 9 145 1.2E-35 T 14-10-2018 IPR006433 Prohead protease P029_00105 baf48dbe04fd234467e56c3ddd6b4b54 156 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 14 146 4.8E-34 T 14-10-2018 IPR006433 Prohead protease P029_00105 baf48dbe04fd234467e56c3ddd6b4b54 156 SUPERFAMILY SSF50789 15 132 8.83E-8 T 14-10-2018 P029_04850 6b59d8320a12c9e4dd0921af5ad2b73e 417 Gene3D G3DSA:3.40.50.1970 20 167 1.2E-30 T 14-10-2018 P029_04850 6b59d8320a12c9e4dd0921af5ad2b73e 417 SUPERFAMILY SSF56796 23 337 1.7E-50 T 14-10-2018 P029_04850 6b59d8320a12c9e4dd0921af5ad2b73e 417 Pfam PF13685 Iron-containing alcohol dehydrogenase 31 281 6.3E-52 T 14-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 P029_03450 16024609b5b9158a15095a3b1af01440 425 SUPERFAMILY SSF103473 15 416 8.24E-34 T 14-10-2018 IPR036259 MFS transporter superfamily P029_03450 16024609b5b9158a15095a3b1af01440 425 Gene3D G3DSA:1.20.1250.20 14 416 1.2E-35 T 14-10-2018 P029_03450 16024609b5b9158a15095a3b1af01440 425 Pfam PF00083 Sugar (and other) transporter 17 223 2.7E-14 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 P029_02235 e84b642f5f02847b7b2215dc8586de99 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 172 1.7E-43 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P029_02235 e84b642f5f02847b7b2215dc8586de99 250 Gene3D G3DSA:3.40.1210.10 1 250 8.9E-62 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P029_02235 e84b642f5f02847b7b2215dc8586de99 250 Pfam PF01975 Survival protein SurE 3 182 3.6E-45 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P029_02235 e84b642f5f02847b7b2215dc8586de99 250 SUPERFAMILY SSF64167 2 247 7.32E-58 T 14-10-2018 P029_02235 e84b642f5f02847b7b2215dc8586de99 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 250 24.531 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 P029_04515 a8938a5d21bb3bd814e060a859abf921 135 SUPERFAMILY SSF110069 13 130 5.36E-43 T 14-10-2018 IPR036767 ApaG domain superfamily P029_04515 a8938a5d21bb3bd814e060a859abf921 135 Pfam PF04379 ApaG domain 24 108 2.4E-31 T 14-10-2018 IPR007474 ApaG domain P029_04515 a8938a5d21bb3bd814e060a859abf921 135 Gene3D G3DSA:2.60.40.1470 9 134 1.1E-42 T 14-10-2018 IPR036767 ApaG domain superfamily P029_02760 b54381a5a563165faefb391aa4523f56 435 SUPERFAMILY SSF56925 45 435 2.04E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_02760 b54381a5a563165faefb391aa4523f56 435 Gene3D G3DSA:2.40.160.20 207 401 4.2E-7 T 14-10-2018 P029_02760 b54381a5a563165faefb391aa4523f56 435 Pfam PF01617 Surface antigen 44 435 1.7E-59 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04555 8424a2a4a8ffe7360474d0d5ccf6bf2f 797 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 209 396 2.1E-14 T 14-10-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 P029_04555 8424a2a4a8ffe7360474d0d5ccf6bf2f 797 SUPERFAMILY SSF52540 428 748 7.43E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_01465 b7fb98aa7d8cabeff326c00ac2a2271a 85 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 28 79 2.4E-12 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 P029_01810 0fe1b0ed024762652d43b392ee5f6d49 509 Pfam PF01039 Carboxyl transferase domain 27 507 8.8E-193 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 P029_01810 0fe1b0ed024762652d43b392ee5f6d49 509 Gene3D G3DSA:3.90.226.10 4 255 2.4E-91 T 14-10-2018 P029_01810 0fe1b0ed024762652d43b392ee5f6d49 509 SUPERFAMILY SSF52096 6 251 2.49E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P029_01810 0fe1b0ed024762652d43b392ee5f6d49 509 Gene3D G3DSA:3.90.226.10 257 509 7.0E-92 T 14-10-2018 P029_01810 0fe1b0ed024762652d43b392ee5f6d49 509 SUPERFAMILY SSF52096 223 509 1.39E-89 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily P029_05065 2e6d6297ad6f43de10d6bb20497274c0 429 SUPERFAMILY SSF56925 39 429 1.15E-15 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05065 2e6d6297ad6f43de10d6bb20497274c0 429 Pfam PF01617 Surface antigen 39 429 2.8E-83 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05065 2e6d6297ad6f43de10d6bb20497274c0 429 Gene3D G3DSA:2.40.160.20 240 391 2.6E-9 T 14-10-2018 P029_00830 2df226a99afbe0af5f8bc3dd139b6abc 258 Pfam PF03799 Cell division protein FtsQ 139 250 3.6E-8 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB P029_00830 2df226a99afbe0af5f8bc3dd139b6abc 258 Pfam PF08478 POTRA domain, FtsQ-type 67 135 1.1E-8 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type P029_03935 880ea3bc3c92071f99f7eb3af153af28 178 Pfam PF11412 Disulphide bond corrector protein DsbC 44 154 2.9E-13 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain P029_05180 7495854ce492a04e3de90a9753462d9f 473 PIRSF PIRSF004919 13 472 4.0E-124 T 14-10-2018 IPR025502 TldD P029_05180 7495854ce492a04e3de90a9753462d9f 473 Pfam PF01523 Putative modulator of DNA gyrase 34 323 6.4E-52 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 P029_05180 7495854ce492a04e3de90a9753462d9f 473 SUPERFAMILY SSF111283 20 469 6.41E-111 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 P029_05605 e1cfba51ec5260b927f9ec53106422e1 365 SUPERFAMILY SSF56925 28 365 4.84E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05605 e1cfba51ec5260b927f9ec53106422e1 365 Pfam PF01617 Surface antigen 29 365 6.1E-36 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00555 1736f954c7d56ed8d9b392cf99f013c0 248 Gene3D G3DSA:3.40.30.10 72 247 1.8E-33 T 14-10-2018 P029_00555 1736f954c7d56ed8d9b392cf99f013c0 248 Pfam PF13462 Thioredoxin 83 240 1.7E-18 T 14-10-2018 IPR012336 Thioredoxin-like fold P029_00555 1736f954c7d56ed8d9b392cf99f013c0 248 SUPERFAMILY SSF52833 76 240 1.72E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_00635 82a590d37f6c9e6cffdd4e1234847b22 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 129 672 5.1E-64 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit P029_00635 82a590d37f6c9e6cffdd4e1234847b22 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 23 731 2.7E-173 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ P029_00635 82a590d37f6c9e6cffdd4e1234847b22 859 Pfam PF11874 Domain of unknown function (DUF3394) 679 854 1.8E-35 T 14-10-2018 IPR021814 Protein of unknown function DUF3394 P029_00820 75613760c237b96e0cde564bf253552f 198 Pfam PF04972 BON domain 126 191 5.2E-12 T 14-10-2018 IPR007055 BON domain P029_00820 75613760c237b96e0cde564bf253552f 198 Pfam PF04972 BON domain 49 113 3.7E-11 T 14-10-2018 IPR007055 BON domain P029_00820 75613760c237b96e0cde564bf253552f 198 SMART SM00749 130 193 2.5E-8 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria P029_00820 75613760c237b96e0cde564bf253552f 198 SMART SM00749 54 117 6.3 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria P029_02295 0a9d481fd4b24f9abdf43973e25efde3 282 Gene3D G3DSA:1.10.940.10 16 157 1.0E-23 T 14-10-2018 IPR035926 NusB-like superfamily P029_02295 0a9d481fd4b24f9abdf43973e25efde3 282 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 20 151 1.9E-29 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 P029_02295 0a9d481fd4b24f9abdf43973e25efde3 282 Pfam PF01029 NusB family 21 150 1.9E-26 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 P029_02295 0a9d481fd4b24f9abdf43973e25efde3 282 SUPERFAMILY SSF48013 18 150 2.49E-24 T 14-10-2018 IPR035926 NusB-like superfamily P029_05205 7ac0d863017fd660a67956c7fb8daedc 282 SUPERFAMILY SSF56925 45 281 4.97E-21 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05205 7ac0d863017fd660a67956c7fb8daedc 282 Pfam PF01617 Surface antigen 43 281 9.5E-80 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05205 7ac0d863017fd660a67956c7fb8daedc 282 Gene3D G3DSA:2.40.160.20 71 281 3.3E-16 T 14-10-2018 P029_05730 3e3132e35847c55c4b2d83e0e100a500 282 Pfam PF01617 Surface antigen 189 267 1.1E-19 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02125 acb60dcc75b3a4c3ee5369f8dfd5dce4 128 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 4.1E-15 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02125 acb60dcc75b3a4c3ee5369f8dfd5dce4 128 SUPERFAMILY SSF51344 3 85 1.12E-12 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_02125 acb60dcc75b3a4c3ee5369f8dfd5dce4 128 Gene3D G3DSA:2.60.15.10 1 120 3.0E-14 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04385 ee34ecb23de499d7e63b93d764db0b30 108 Gene3D G3DSA:3.10.150.10 18 92 6.6E-10 T 14-10-2018 P029_04385 ee34ecb23de499d7e63b93d764db0b30 108 SUPERFAMILY SSF55979 17 87 1.26E-9 T 14-10-2018 P029_04385 ee34ecb23de499d7e63b93d764db0b30 108 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 17 86 2.2E-10 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 32 152 2.9E-40 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 13 159 27.887 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 80 138 5.0E-23 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 112 133 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 SUPERFAMILY SSF143243 23 184 1.83E-52 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 Gene3D G3DSA:3.30.460.80 4 131 1.2E-34 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_02230 bb3c062afdb3a3178375d87a1e43fd03 188 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 32 151 2.2E-40 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 P029_04215 27be25ab7585a30957f51c8510ee92c2 338 Pfam PF03060 Nitronate monooxygenase 85 327 6.7E-31 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P029_04215 27be25ab7585a30957f51c8510ee92c2 338 Pfam PF03060 Nitronate monooxygenase 11 81 4.3E-16 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P029_04215 27be25ab7585a30957f51c8510ee92c2 338 SUPERFAMILY SSF51412 13 330 7.48E-50 T 14-10-2018 P029_04215 27be25ab7585a30957f51c8510ee92c2 338 Gene3D G3DSA:3.20.20.70 10 338 2.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_05370 1b8af8ac2421efc5c8831043ebf7a456 171 SUPERFAMILY SSF142433 4 167 1.44E-43 T 14-10-2018 IPR036653 CinA-like, C-terminal P029_05370 1b8af8ac2421efc5c8831043ebf7a456 171 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 17 165 1.3E-34 T 14-10-2018 IPR008136 CinA, C-terminal P029_05370 1b8af8ac2421efc5c8831043ebf7a456 171 Gene3D G3DSA:3.90.950.20 2 170 1.9E-50 T 14-10-2018 IPR036653 CinA-like, C-terminal P029_05370 1b8af8ac2421efc5c8831043ebf7a456 171 Pfam PF02464 Competence-damaged protein 11 166 2.6E-45 T 14-10-2018 IPR008136 CinA, C-terminal P029_05445 73657a9d932266807f7ecea4b18d15ed 433 Gene3D G3DSA:2.40.160.20 237 401 2.1E-6 T 14-10-2018 P029_05445 73657a9d932266807f7ecea4b18d15ed 433 SUPERFAMILY SSF56925 231 391 5.76E-9 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05445 73657a9d932266807f7ecea4b18d15ed 433 Pfam PF01617 Surface antigen 45 431 1.8E-50 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01540 59d7313a725cc3abcf9dbe40f8a7f410 230 Pfam PF02602 Uroporphyrinogen-III synthase HemD 16 225 4.5E-33 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_01540 59d7313a725cc3abcf9dbe40f8a7f410 230 SUPERFAMILY SSF69618 2 229 3.66E-37 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 P029_01540 59d7313a725cc3abcf9dbe40f8a7f410 230 Gene3D G3DSA:3.40.50.10090 1 111 4.2E-8 T 14-10-2018 P029_01540 59d7313a725cc3abcf9dbe40f8a7f410 230 Gene3D G3DSA:3.40.50.10090 112 228 1.7E-11 T 14-10-2018 P029_05550 4069cf6885f32aaf5696eec1192191c3 144 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 126 1.3E-25 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 P029_05550 4069cf6885f32aaf5696eec1192191c3 144 Gene3D G3DSA:3.40.50.300 9 143 7.5E-31 T 14-10-2018 P029_05550 4069cf6885f32aaf5696eec1192191c3 144 SUPERFAMILY SSF52540 19 116 4.65E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase P029_05550 4069cf6885f32aaf5696eec1192191c3 144 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 14 127 1.6E-28 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 P029_04945 5b569f9e50c140839eaf40c41b490a00 402 Pfam PF13899 Thioredoxin-like 296 373 3.2E-6 T 14-10-2018 P029_04945 5b569f9e50c140839eaf40c41b490a00 402 SUPERFAMILY SSF52833 290 400 1.31E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily P029_04945 5b569f9e50c140839eaf40c41b490a00 402 Gene3D G3DSA:3.40.30.10 291 399 3.0E-6 T 14-10-2018 P029_03525 8078fd3f513572a32409e8e71f317850 241 Pfam PF03099 Biotin/lipoate A/B protein ligase family 14 138 8.2E-15 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 P029_03525 8078fd3f513572a32409e8e71f317850 241 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 7 231 2.0E-44 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 P029_03525 8078fd3f513572a32409e8e71f317850 241 Gene3D G3DSA:3.30.930.10 5 195 5.9E-43 T 14-10-2018 P029_03525 8078fd3f513572a32409e8e71f317850 241 SUPERFAMILY SSF55681 4 193 6.09E-44 T 14-10-2018 P029_04825 d0baa0c403649d133095ebd4d66feac7 154 SUPERFAMILY SSF56925 66 144 5.76E-13 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04825 d0baa0c403649d133095ebd4d66feac7 154 Pfam PF01617 Surface antigen 39 152 1.4E-41 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04825 d0baa0c403649d133095ebd4d66feac7 154 Gene3D G3DSA:2.40.160.20 24 148 3.6E-10 T 14-10-2018 P029_03815 619d32c677586ecc4e9ae6c90805b4ce 280 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 7 269 52.129 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein P029_03815 619d32c677586ecc4e9ae6c90805b4ce 280 Pfam PF03618 Kinase/pyrophosphorylase 9 264 3.2E-85 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 P029_04805 a8626963b513ef33d992e922207cf7c4 486 Pfam PF02386 Cation transport protein 69 268 1.6E-25 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 P029_04805 a8626963b513ef33d992e922207cf7c4 486 Pfam PF02386 Cation transport protein 295 468 1.3E-13 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 P029_00470 e2e579481696bfa3e52fefb94cc404dd 467 Pfam PF03060 Nitronate monooxygenase 133 350 2.4E-8 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 P029_00470 e2e579481696bfa3e52fefb94cc404dd 467 SUPERFAMILY SSF51412 99 324 5.19E-7 T 14-10-2018 P029_00470 e2e579481696bfa3e52fefb94cc404dd 467 Gene3D G3DSA:3.20.20.70 15 467 1.1E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 P029_03905 1ed32034af1d7ed5d47b4fd2b9af9080 64 Pfam PF01617 Surface antigen 9 64 1.2E-9 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01525 3a27f74130bec61313d3f84d05383e55 278 Gene3D G3DSA:3.30.420.10 5 224 2.8E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 P029_01525 3a27f74130bec61313d3f84d05383e55 278 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 52 266 2.3E-77 T 14-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like P029_01525 3a27f74130bec61313d3f84d05383e55 278 SUPERFAMILY SSF53098 45 239 8.76E-33 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily P029_04585 52b43cf096ff3cbb148226b7b01fbd18 124 Pfam PF04956 TrbC/VIRB2 family 3 104 8.0E-16 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_02725 79e0c3d5c9e8295ff240ea78aaf29508 67 SUPERFAMILY SSF52374 9 57 5.63E-5 T 14-10-2018 P029_02725 79e0c3d5c9e8295ff240ea78aaf29508 67 Gene3D G3DSA:3.40.50.620 1 66 8.9E-9 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_01625 1556a000a0650e2bb1ce2c2c05278aae 1520 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 829 1024 1.6E-18 T 14-10-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 P029_05760 683dd53fdb59f6ea538eeeac677323c2 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 1.5E-11 T 14-10-2018 P029_05760 683dd53fdb59f6ea538eeeac677323c2 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 1.5E-11 T 14-10-2018 P029_05760 683dd53fdb59f6ea538eeeac677323c2 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 1.5E-11 T 14-10-2018 P029_05760 683dd53fdb59f6ea538eeeac677323c2 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 1.5E-11 T 14-10-2018 P029_05760 683dd53fdb59f6ea538eeeac677323c2 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 1.5E-11 T 14-10-2018 P029_05760 683dd53fdb59f6ea538eeeac677323c2 221 Pfam PF03379 CcmB protein 6 208 6.6E-16 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 P029_02755 59735c5165861cd08222159ffd53e628 432 SUPERFAMILY SSF56925 43 390 3.14E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_02755 59735c5165861cd08222159ffd53e628 432 Pfam PF01617 Surface antigen 43 432 8.9E-62 T 14-10-2018 IPR002566 Surface antigen msp4 P029_02755 59735c5165861cd08222159ffd53e628 432 Gene3D G3DSA:2.40.160.20 212 394 1.9E-9 T 14-10-2018 P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 91 2.3E-11 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 Gene3D G3DSA:3.30.70.1400 8 92 3.5E-23 T 14-10-2018 P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 SUPERFAMILY SSF103025 4 208 3.3E-46 T 14-10-2018 P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 153 215 8.3E-20 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 PIRSF PIRSF006487 138 248 7.4 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 PIRSF PIRSF006487 3 100 1.5E-8 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 P029_05225 26c7923d9ee25132a9046063b74ad2d5 275 Gene3D G3DSA:2.40.30.160 164 257 1.1E-15 T 14-10-2018 P029_04665 0a90c7511f407c7928003575e9315518 115 SUPERFAMILY SSF56925 66 104 8.63E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04665 0a90c7511f407c7928003575e9315518 115 Pfam PF01617 Surface antigen 37 107 3.9E-19 T 14-10-2018 IPR002566 Surface antigen msp4 P029_05010 3bde2d55ad6ce602ae69a7d7a74dcf79 237 Pfam PF01617 Surface antigen 145 223 4.3E-19 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04835 9a9fe8e7cf33d5718e8c0daa6d74be7c 167 Pfam PF02326 Plant ATP synthase F0 5 50 1.6E-7 T 14-10-2018 IPR003319 ATP synthase YMF19-like, N-terminal P029_00640 d0bf4124fe253f2199ab20ccae21b5ff 199 Pfam PF02674 Colicin V production protein 3 153 6.9E-26 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 P029_05535 9b00b24ffe99a874c42af40c59ddc34f 102 Pfam PF02575 YbaB/EbfC DNA-binding family 14 98 9.1E-14 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family P029_05535 9b00b24ffe99a874c42af40c59ddc34f 102 Gene3D G3DSA:3.30.1310.10 4 100 6.1E-11 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily P029_05535 9b00b24ffe99a874c42af40c59ddc34f 102 SUPERFAMILY SSF82607 7 99 5.49E-13 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily P029_04720 9bad21c15074675f7d028918b9a14eff 67 Pfam PF01617 Surface antigen 1 67 1.3E-19 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00750 78f7ba4cefe5b5acf78a3f9ef50b26aa 401 Pfam PF01617 Surface antigen 33 399 9.3E-72 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00750 78f7ba4cefe5b5acf78a3f9ef50b26aa 401 SUPERFAMILY SSF56925 33 391 4.71E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_00750 78f7ba4cefe5b5acf78a3f9ef50b26aa 401 Gene3D G3DSA:2.40.160.20 203 394 2.0E-9 T 14-10-2018 P029_04840 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 45 70 1.7E-16 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04840 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 28 43 1.7E-16 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04840 658774fadc02ee9dbe5d963f46dab684 74 PRINTS PR00124 ATP synthase C subunit signature 7 26 1.7E-16 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04840 658774fadc02ee9dbe5d963f46dab684 74 SUPERFAMILY SSF81333 3 71 8.24E-16 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily P029_04840 658774fadc02ee9dbe5d963f46dab684 74 Gene3D G3DSA:1.20.20.10 2 73 6.2E-20 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 P029_04840 658774fadc02ee9dbe5d963f46dab684 74 Pfam PF00137 ATP synthase subunit C 7 69 1.3E-11 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 P029_01705 db90fa723489875278a383abc4ca04a6 393 Gene3D G3DSA:2.130.10.10 55 392 3.3E-46 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 P029_01705 db90fa723489875278a383abc4ca04a6 393 SMART SM00564 152 185 49.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P029_01705 db90fa723489875278a383abc4ca04a6 393 SMART SM00564 65 100 390.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P029_01705 db90fa723489875278a383abc4ca04a6 393 SMART SM00564 248 279 22.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P029_01705 db90fa723489875278a383abc4ca04a6 393 SMART SM00564 112 143 2.6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P029_01705 db90fa723489875278a383abc4ca04a6 393 SMART SM00564 285 317 110.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat P029_01705 db90fa723489875278a383abc4ca04a6 393 SUPERFAMILY SSF50998 71 383 1.06E-45 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily P029_01705 db90fa723489875278a383abc4ca04a6 393 Pfam PF13360 PQQ-like domain 81 315 5.6E-42 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat P029_05745 1d5a7622f1c217359c472754db4b581f 202 Pfam PF05494 MlaC protein 57 201 7.1E-24 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC P029_05745 1d5a7622f1c217359c472754db4b581f 202 Gene3D G3DSA:3.10.450.710 31 202 8.9E-18 T 14-10-2018 P029_04105 790c692803c08aac672144f37a538f50 147 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 7 128 1.0E-28 T 14-10-2018 IPR020143 Uncharacterised protein family, RP436 P029_05670 7571c6cc9d6a11992b650ffe828f81a1 277 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 16 271 17.616 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P029_05670 7571c6cc9d6a11992b650ffe828f81a1 277 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 15 271 3.6E-64 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P029_05670 7571c6cc9d6a11992b650ffe828f81a1 277 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 19 265 1.1E-67 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 P029_01605 c85590b7e89bb841db5ec60dd00d4a23 97 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 7 89 9.0E-23 T 14-10-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB P029_00940 f977f149a90e0866ccb1cf46dc9477f0 151 Pfam PF07310 PAS domain 10 145 1.7E-16 T 14-10-2018 IPR009922 Protein of unknown function DUF1457 P029_00765 b43dbad9033934b5ce858d11190ee138 281 Gene3D G3DSA:1.10.287.700 110 216 3.7E-8 T 14-10-2018 P029_05725 8df0e52bd43fe8c18284c8cfebc21eaa 88 SUPERFAMILY SSF56925 9 88 8.24E-6 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05725 8df0e52bd43fe8c18284c8cfebc21eaa 88 Pfam PF01617 Surface antigen 9 88 2.0E-26 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01860 bd9e66a2a4bea50211c8fe1139e8574d 231 Gene3D G3DSA:3.10.450.230 91 230 1.1E-18 T 14-10-2018 P029_01860 bd9e66a2a4bea50211c8fe1139e8574d 231 SUPERFAMILY SSF54427 93 228 4.38E-6 T 14-10-2018 IPR032710 NTF2-like domain superfamily P029_01860 bd9e66a2a4bea50211c8fe1139e8574d 231 Pfam PF04335 VirB8 protein 19 209 7.1E-5 T 14-10-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 P029_04580 b61b4bf060825f6fde2c1f7d28ebc261 119 Pfam PF04956 TrbC/VIRB2 family 3 100 3.2E-17 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_02260 f2cf1d5360c8061c5340b0bf01554919 79 Pfam PF01026 TatD related DNase 9 61 1.6E-12 T 14-10-2018 IPR001130 TatD family GO:0016788 P029_02260 f2cf1d5360c8061c5340b0bf01554919 79 Gene3D G3DSA:3.20.20.140 2 69 6.9E-16 T 14-10-2018 P029_02260 f2cf1d5360c8061c5340b0bf01554919 79 SUPERFAMILY SSF51556 9 62 1.87E-14 T 14-10-2018 IPR032466 Metal-dependent hydrolase P029_04625 f718cc7eb71cf8dff3530c66c5f9b8fa 125 Pfam PF04956 TrbC/VIRB2 family 6 96 1.5E-15 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_02615 6ae5a5841e3d6f93dd01998d31325ef3 201 Pfam PF06271 RDD family 37 184 1.4E-19 T 14-10-2018 IPR010432 RDD P029_03885 4308520518c54cb12d01e4bf80bf515e 390 SUPERFAMILY SSF55785 254 305 7.67E-5 T 14-10-2018 IPR035965 PAS domain superfamily P029_02900 2a259528689186bc8d11d5b91a756362 84 Gene3D G3DSA:3.30.2290.10 14 75 1.9E-5 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal P029_02650 a22026a139096a98033389d8ddb773e2 185 Pfam PF05135 Phage gp6-like head-tail connector protein 20 121 4.0E-16 T 14-10-2018 IPR021146 Phage gp6-like head-tail connector protein P029_02650 a22026a139096a98033389d8ddb773e2 185 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 15 164 3.1E-12 T 14-10-2018 IPR011738 Phage conserved hypothetical protein P029_05135 42ffffe78840e066f61a005541c1cc74 68 Gene3D G3DSA:3.40.50.1470 1 67 1.6E-13 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 P029_05135 42ffffe78840e066f61a005541c1cc74 68 Pfam PF01195 Peptidyl-tRNA hydrolase 5 59 2.4E-11 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 P029_05135 42ffffe78840e066f61a005541c1cc74 68 SUPERFAMILY SSF53178 4 53 5.1E-13 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 P029_04995 dec12eecd53b4a7441f1e9bb2fa0c9a0 422 SUPERFAMILY SSF56925 39 422 8.11E-16 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_04995 dec12eecd53b4a7441f1e9bb2fa0c9a0 422 Pfam PF01617 Surface antigen 39 422 2.8E-83 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04995 dec12eecd53b4a7441f1e9bb2fa0c9a0 422 Gene3D G3DSA:2.40.160.20 242 384 2.6E-9 T 14-10-2018 P029_01475 428320451677d7aec3bce697acb16ba7 188 Pfam PF13244 Domain of unknown function (DUF4040) 14 78 1.1E-15 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 P029_00580 9638a80d67a805f88bb176b91b4f1c63 147 Pfam PF01617 Surface antigen 57 135 5.3E-20 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00580 9638a80d67a805f88bb176b91b4f1c63 147 SUPERFAMILY SSF56925 92 131 9.42E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05575 0b88c81674981562b3e42b2261c44be5 202 Pfam PF01617 Surface antigen 34 148 1.6E-28 T 14-10-2018 IPR002566 Surface antigen msp4 P029_01050 848cae215829bb819768857c71b4f35e 216 SUPERFAMILY SSF102645 3 211 1.57E-56 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 P029_01050 848cae215829bb819768857c71b4f35e 216 Gene3D G3DSA:3.40.50.10300 2 215 1.5E-52 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 P029_01050 848cae215829bb819768857c71b4f35e 216 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 3 181 8.2E-50 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 P029_00515 8cc5400ea4ee22e7a0d2ef9c9144cbd6 235 Pfam PF01148 Cytidylyltransferase family 62 229 4.4E-46 T 14-10-2018 P029_02400 cde7007cbc93164405368a99dd9c4a9d 93 Pfam PF11020 Domain of unknown function (DUF2610) 4 83 1.2E-41 T 14-10-2018 IPR021277 Protein of unknown function DUF2610 P029_00380 5fd5a8a93c437f9f316e0e89f7e18c27 271 TIGRFAM TIGR02781 VirB9: P-type conjugative transfer protein VirB9 5 257 2.9E-66 T 14-10-2018 IPR014148 P-type conjugative transfer protein VirB9 P029_00380 5fd5a8a93c437f9f316e0e89f7e18c27 271 Pfam PF03524 Conjugal transfer protein 32 256 9.3E-61 T 14-10-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX P029_00380 5fd5a8a93c437f9f316e0e89f7e18c27 271 Gene3D G3DSA:2.60.40.2500 157 268 7.0E-30 T 14-10-2018 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily P029_00945 3465290748962799ac2ef2f1ae8e4993 222 SUPERFAMILY SSF51261 53 211 5.23E-22 T 14-10-2018 IPR011055 Duplicated hybrid motif P029_00945 3465290748962799ac2ef2f1ae8e4993 222 Pfam PF01551 Peptidase family M23 110 209 2.4E-16 T 14-10-2018 IPR016047 Peptidase M23 P029_00945 3465290748962799ac2ef2f1ae8e4993 222 Gene3D G3DSA:2.70.70.10 72 215 2.8E-19 T 14-10-2018 IPR011055 Duplicated hybrid motif P029_02395 178d9733446e4f0b2e093274a559b4fc 99 Gene3D G3DSA:3.40.50.620 34 92 6.5E-12 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold P029_05495 b92095c3ec9799fe5c2f336199bda791 86 Pfam PF07330 Protein of unknown function (DUF1467) 3 74 1.1E-14 T 14-10-2018 IPR009935 Protein of unknown function DUF1467 P029_04475 324654b609451bafd4438b859e6a58c0 97 Pfam PF01617 Surface antigen 6 92 1.6E-25 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04865 b685c4ed865a9dec98bf2361f2863c88 386 Gene3D G3DSA:2.40.160.20 252 380 2.3E-9 T 14-10-2018 P029_04865 b685c4ed865a9dec98bf2361f2863c88 386 Pfam PF01617 Surface antigen 27 384 4.9E-73 T 14-10-2018 IPR002566 Surface antigen msp4 P029_04865 b685c4ed865a9dec98bf2361f2863c88 386 SUPERFAMILY SSF56925 27 376 5.23E-14 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_01135 6d0e07d7764c0025b9a3f39243cd8107 113 Pfam PF13747 Domain of unknown function (DUF4164) 19 109 2.9E-11 T 14-10-2018 IPR025310 Protein of unknown function DUF4164 P029_04780 63ea05833455c9a8ed9b2be83c39beed 332 Pfam PF01617 Surface antigen 27 332 6.8E-43 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00360 4d467208825ff8750a914c17bf9dd327 307 Pfam PF03547 Membrane transport protein 6 124 2.1E-6 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 P029_00210 ef7e9163e1114470fd23b2bd8460ba9c 101 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 21 97 6.4E-14 T 14-10-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 P029_03990 2ba9867810b5dd327799bed51e432746 386 Pfam PF01594 AI-2E family transporter 30 372 7.6E-44 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like P029_04605 fb84b80319ff3655592dae770b659ea9 116 Pfam PF04956 TrbC/VIRB2 family 7 101 6.2E-16 T 14-10-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 P029_05555 3a15d335fc6c6daf687ca977c3b9e5d1 64 SUPERFAMILY SSF56925 17 54 3.92E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel P029_05555 3a15d335fc6c6daf687ca977c3b9e5d1 64 Pfam PF01617 Surface antigen 5 58 9.0E-19 T 14-10-2018 IPR002566 Surface antigen msp4 P029_00280 46e98156fe51b96a17fb43f4b53a6c22 198 Pfam PF06242 Protein of unknown function (DUF1013) 39 177 2.0E-58 T 14-10-2018 IPR010421 Protein of unknown function DUF1013 P029_01955 420e23a4c271870d946a5a95c52542fe 236 Pfam PF03741 Integral membrane protein TerC family 12 199 3.2E-40 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021