locus-tag class description GUI12_00005 PF01039 Carboxyl transferase domain GUI12_00025 PF01327 Polypeptide deformylase GUI12_00065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GUI12_00070 PF01225 Mur ligase family, catalytic domain GUI12_00070 PF02875 Mur ligase family, glutamate ligase domain GUI12_00070 PF08245 Mur ligase middle domain GUI12_00075 PF01649 Ribosomal protein S20 GUI12_00080 PF00762 Ferrochelatase GUI12_00090 PF13614 AAA domain GUI12_00095 PF17762 HTH domain found in ParB protein GUI12_00095 PF02195 ParB-like nuclease domain GUI12_00105 PF03652 Holliday junction resolvase GUI12_00135 PF17760 UvrA interaction domain GUI12_00135 PF17755 UvrA DNA-binding domain GUI12_00140 PF00873 AcrB/AcrD/AcrF family GUI12_00155 PF01975 Survival protein SurE GUI12_00160 PF04608 Phosphatidylglycerophosphatase A GUI12_00175 PF00677 Lumazine binding domain GUI12_00180 PF02810 SEC-C motif GUI12_00180 PF07517 SecA DEAD-like domain GUI12_00180 PF01043 SecA preprotein cross-linking domain GUI12_00180 PF07516 SecA Wing and Scaffold domain GUI12_00185 PF00361 Proton-conducting membrane transporter GUI12_00185 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GUI12_00190 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GUI12_00195 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GUI12_00200 PF01523 Putative modulator of DNA gyrase GUI12_00205 PF01227 GTP cyclohydrolase I GUI12_00210 PF00231 ATP synthase GUI12_00225 PF01207 Dihydrouridine synthase (Dus) GUI12_00235 PF01416 tRNA pseudouridine synthase GUI12_00240 PF00075 RNase H GUI12_00245 PF01979 Amidohydrolase family GUI12_00250 PF00004 ATPase family associated with various cellular activities (AAA) GUI12_00250 PF17862 AAA+ lid domain GUI12_00250 PF06480 FtsH Extracellular GUI12_00250 PF01434 Peptidase family M41 GUI12_00255 PF00072 Response regulator receiver domain GUI12_00255 PF00486 Transcriptional regulatory protein, C terminal GUI12_00260 PF02875 Mur ligase family, glutamate ligase domain GUI12_00260 PF08245 Mur ligase middle domain GUI12_00260 PF01225 Mur ligase family, catalytic domain GUI12_00265 PF02272 DHHA1 domain GUI12_00265 PF01411 tRNA synthetases class II (A) GUI12_00265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GUI12_00275 PF01925 Sulfite exporter TauE/SafE GUI12_00285 PF07687 Peptidase dimerisation domain GUI12_00285 PF01546 Peptidase family M20/M25/M40 GUI12_00290 PF01208 Uroporphyrinogen decarboxylase (URO-D) GUI12_00315 PF00490 Delta-aminolevulinic acid dehydratase GUI12_00330 PF00664 ABC transporter transmembrane region GUI12_00330 PF00005 ABC transporter GUI12_00340 PF04860 Phage portal protein GUI12_00345 PF01176 Translation initiation factor 1A / IF-1 GUI12_00350 PF00436 Single-strand binding protein family GUI12_00360 PF00348 Polyprenyl synthetase GUI12_00370 PF01029 NusB family GUI12_00375 PF00885 6,7-dimethyl-8-ribityllumazine synthase GUI12_00380 PF02096 60Kd inner membrane protein GUI12_00380 PF14849 YidC periplasmic domain GUI12_00395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GUI12_00395 PF07498 Rho termination factor, N-terminal domain GUI12_00395 PF07497 Rho termination factor, RNA-binding domain GUI12_00405 PF10415 Fumarase C C-terminus GUI12_00405 PF00206 Lyase GUI12_00410 PF01250 Ribosomal protein S6 GUI12_00415 PF01084 Ribosomal protein S18 GUI12_00420 PF03948 Ribosomal protein L9, C-terminal domain GUI12_00420 PF01281 Ribosomal protein L9, N-terminal domain GUI12_00425 PF00206 Lyase GUI12_00425 PF10397 Adenylosuccinate lyase C-terminus GUI12_00435 PF00999 Sodium/hydrogen exchanger family GUI12_00435 PF02254 TrkA-N domain GUI12_00445 PF00834 Ribulose-phosphate 3 epimerase family GUI12_00455 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GUI12_00455 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GUI12_00455 PF06827 Zinc finger found in FPG and IleRS GUI12_00465 PF03717 Penicillin-binding Protein dimerisation domain GUI12_00465 PF00905 Penicillin binding protein transpeptidase domain GUI12_00470 PF00005 ABC transporter GUI12_00475 PF00398 Ribosomal RNA adenine dimethylase GUI12_00525 PF12826 Helix-hairpin-helix motif GUI12_00525 PF03120 NAD-dependent DNA ligase OB-fold domain GUI12_00525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GUI12_00525 PF00533 BRCA1 C Terminus (BRCT) domain GUI12_00525 PF01653 NAD-dependent DNA ligase adenylation domain GUI12_00530 PF14864 Alkyl sulfatase C-terminal GUI12_00530 PF14863 Alkyl sulfatase dimerisation GUI12_00530 PF00753 Metallo-beta-lactamase superfamily GUI12_00535 PF06114 IrrE N-terminal-like domain GUI12_00550 PF03618 Kinase/pyrophosphorylase GUI12_00560 PF02502 Ribose/Galactose Isomerase GUI12_00565 PF00464 Serine hydroxymethyltransferase GUI12_00580 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GUI12_00580 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GUI12_00585 PF01313 Bacterial export proteins, family 3 GUI12_00590 PF02142 MGS-like domain GUI12_00590 PF01808 AICARFT/IMPCHase bienzyme GUI12_00610 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GUI12_00615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GUI12_00615 PF00809 Pterin binding enzyme GUI12_00625 PF00929 Exonuclease GUI12_00635 PF14437 MafB19-like deaminase GUI12_00640 PF01612 3'-5' exonuclease GUI12_00640 PF00570 HRDC domain GUI12_00645 PF03309 Type III pantothenate kinase GUI12_00650 PF01180 Dihydroorotate dehydrogenase GUI12_00670 PF01367 5'-3' exonuclease, C-terminal SAM fold GUI12_00670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GUI12_00670 PF00476 DNA polymerase family A GUI12_00675 PF01791 DeoC/LacD family aldolase GUI12_00680 PF01594 AI-2E family transporter GUI12_00690 PF00768 D-alanyl-D-alanine carboxypeptidase GUI12_00690 PF07943 Penicillin-binding protein 5, C-terminal domain GUI12_00695 PF00034 Cytochrome c GUI12_00700 PF00933 Glycosyl hydrolase family 3 N terminal domain GUI12_00715 PF01195 Peptidyl-tRNA hydrolase GUI12_00720 PF01386 Ribosomal L25p family GUI12_00720 PF14693 Ribosomal protein TL5, C-terminal domain GUI12_00725 PF00528 Binding-protein-dependent transport system inner membrane component GUI12_00730 PF01171 PP-loop family GUI12_00735 PF16123 Hydroxyacylglutathione hydrolase C-terminus GUI12_00735 PF00753 Metallo-beta-lactamase superfamily GUI12_00740 PF00902 Sec-independent protein translocase protein (TatC) GUI12_00745 PF05175 Methyltransferase small domain GUI12_00745 PF17827 PrmC N-terminal domain GUI12_00745 PF02390 Putative methyltransferase GUI12_00750 PF00012 Hsp70 protein GUI12_00755 PF12111 Polyribonucleotide phosphorylase C terminal GUI12_00755 PF10150 Ribonuclease E/G family GUI12_00755 PF00575 S1 RNA binding domain GUI12_00765 PF03100 CcmE GUI12_00775 PF00892 EamA-like transporter family GUI12_00780 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GUI12_00780 PF00364 Biotin-requiring enzyme GUI12_00780 PF02817 e3 binding domain GUI12_00785 PF00692 dUTPase GUI12_00790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GUI12_00790 PF00529 HlyD membrane-fusion protein of T1SS GUI12_00800 PF00578 AhpC/TSA family GUI12_00805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GUI12_00805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GUI12_00815 PF01311 Bacterial export proteins, family 1 GUI12_00820 PF00155 Aminotransferase class I and II GUI12_00830 PF08264 Anticodon-binding domain of tRNA GUI12_00830 PF00133 tRNA synthetases class I (I, L, M and V) GUI12_00830 PF13603 Leucyl-tRNA synthetase, Domain 2 GUI12_00830 PF09334 tRNA synthetases class I (M) GUI12_00835 PF08264 Anticodon-binding domain of tRNA GUI12_00835 PF09334 tRNA synthetases class I (M) GUI12_00840 PF08264 Anticodon-binding domain of tRNA GUI12_00840 PF00133 tRNA synthetases class I (I, L, M and V) GUI12_00850 PF14579 Helix-hairpin-helix motif GUI12_00850 PF02811 PHP domain GUI12_00850 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GUI12_00850 PF07733 Bacterial DNA polymerase III alpha NTPase domain GUI12_00890 PF00572 Ribosomal protein L13 GUI12_00895 PF00380 Ribosomal protein S9/S16 GUI12_00910 PF01252 Signal peptidase (SPase) II GUI12_00915 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GUI12_00915 PF17854 FtsK alpha domain GUI12_00915 PF09397 Ftsk gamma domain GUI12_00915 PF01580 FtsK/SpoIIIE family GUI12_00920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GUI12_00920 PF00306 ATP synthase alpha/beta chain, C terminal domain GUI12_00920 PF02874 ATP synthase alpha/beta family, beta-barrel domain GUI12_00930 PF12704 MacB-like periplasmic core domain GUI12_00930 PF02687 FtsX-like permease family GUI12_00935 PF03707 Bacterial signalling protein N terminal repeat GUI12_00935 PF00990 Diguanylate cyclase, GGDEF domain GUI12_00935 PF00563 EAL domain GUI12_00940 PF13244 Domain of unknown function (DUF4040) GUI12_00940 PF00361 Proton-conducting membrane transporter GUI12_00940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GUI12_00945 PF00355 Rieske [2Fe-2S] domain GUI12_00945 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GUI12_00950 PF00032 Cytochrome b(C-terminal)/b6/petD GUI12_00950 PF00033 Cytochrome b/b6/petB GUI12_00955 PF02167 Cytochrome C1 family GUI12_00960 PF00561 alpha/beta hydrolase fold GUI12_00965 PF00330 Aconitase family (aconitate hydratase) GUI12_00965 PF00694 Aconitase C-terminal domain GUI12_00995 PF00285 Citrate synthase, C-terminal domain GUI12_01015 PF01106 NifU-like domain GUI12_01020 PF14572 Phosphoribosyl synthetase-associated domain GUI12_01020 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GUI12_01025 PF02785 Biotin carboxylase C-terminal domain GUI12_01025 PF00289 Biotin carboxylase, N-terminal domain GUI12_01025 PF00364 Biotin-requiring enzyme GUI12_01025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GUI12_01025 PF18140 Propionyl-coenzyme A carboxylase BT domain GUI12_01030 PF02938 GAD domain GUI12_01030 PF00152 tRNA synthetases class II (D, K and N) GUI12_01030 PF01336 OB-fold nucleic acid binding domain GUI12_01050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GUI12_01055 PF00829 Ribosomal prokaryotic L21 protein GUI12_01060 PF01016 Ribosomal L27 protein GUI12_01080 PF05036 Sporulation related domain GUI12_01080 PF03330 Lytic transglycolase GUI12_01100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GUI12_01100 PF02874 ATP synthase alpha/beta family, beta-barrel domain GUI12_01110 PF00923 Transaldolase/Fructose-6-phosphate aldolase GUI12_01115 PF01381 Helix-turn-helix GUI12_01120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GUI12_01120 PF00056 lactate/malate dehydrogenase, NAD binding domain GUI12_01125 PF00391 PEP-utilising enzyme, mobile domain GUI12_01125 PF02896 PEP-utilising enzyme, TIM barrel domain GUI12_01125 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GUI12_01135 PF08704 tRNA methyltransferase complex GCD14 subunit GUI12_01140 PF00795 Carbon-nitrogen hydrolase GUI12_01150 PF00709 Adenylosuccinate synthetase GUI12_01170 PF13393 Histidyl-tRNA synthetase GUI12_01170 PF03129 Anticodon binding domain GUI12_01180 PF08946 Osmosensory transporter coiled coil GUI12_01180 PF00083 Sugar (and other) transporter GUI12_01195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GUI12_01200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GUI12_01205 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GUI12_01210 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GUI12_01210 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GUI12_01215 PF12838 4Fe-4S dicluster domain GUI12_01225 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GUI12_01235 PF03485 Arginyl tRNA synthetase N terminal domain GUI12_01235 PF05746 DALR anticodon binding domain GUI12_01235 PF00750 tRNA synthetases class I (R) GUI12_01240 PF01687 Riboflavin kinase GUI12_01240 PF06574 FAD synthetase GUI12_01245 PF01553 Acyltransferase GUI12_01250 PF03462 PCRF domain GUI12_01250 PF00472 RF-1 domain GUI12_01265 PF03167 Uracil DNA glycosylase superfamily GUI12_01275 PF00204 DNA gyrase B GUI12_01275 PF00986 DNA gyrase B subunit, carboxyl terminus GUI12_01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GUI12_01275 PF01751 Toprim domain GUI12_01280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GUI12_01280 PF01926 50S ribosome-binding GTPase GUI12_01285 PF00684 DnaJ central domain GUI12_01285 PF01556 DnaJ C terminal domain GUI12_01285 PF00226 DnaJ domain GUI12_01295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GUI12_01295 PF03900 Porphobilinogen deaminase, C-terminal domain GUI12_01300 PF12705 PD-(D/E)XK nuclease superfamily GUI12_01300 PF00580 UvrD/REP helicase N-terminal domain GUI12_01300 PF13361 UvrD-like helicase C-terminal domain GUI12_01310 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GUI12_01310 PF00117 Glutamine amidotransferase class-I GUI12_01320 PF00293 NUDIX domain GUI12_01335 PF00676 Dehydrogenase E1 component GUI12_01340 PF00154 recA bacterial DNA recombination protein GUI12_01345 PF01514 Secretory protein of YscJ/FliF family GUI12_01345 PF08345 Flagellar M-ring protein C-terminal GUI12_01350 PF14841 FliG middle domain GUI12_01350 PF14842 FliG N-terminal domain GUI12_01350 PF01706 FliG C-terminal domain GUI12_01375 PF04452 RNA methyltransferase GUI12_01385 PF01272 Transcription elongation factor, GreA/GreB, C-term GUI12_01385 PF03449 Transcription elongation factor, N-terminal GUI12_01390 PF07992 Pyridine nucleotide-disulphide oxidoreductase GUI12_01390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GUI12_01400 PF08241 Methyltransferase domain GUI12_01410 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GUI12_01410 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GUI12_01410 PF13288 DXP reductoisomerase C-terminal domain GUI12_01420 PF00462 Glutaredoxin GUI12_01425 PF03702 Anhydro-N-acetylmuramic acid kinase GUI12_01430 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GUI12_01435 PF00266 Aminotransferase class-V GUI12_01440 PF00266 Aminotransferase class-V GUI12_01445 PF01592 NifU-like N terminal domain GUI12_01450 PF01521 Iron-sulphur cluster biosynthesis GUI12_01455 PF07743 HSCB C-terminal oligomerisation domain GUI12_01460 PF00012 Hsp70 protein GUI12_01465 PF00111 2Fe-2S iron-sulfur cluster binding domain GUI12_01470 PF18073 Rubredoxin metal binding domain GUI12_01475 PF02405 Permease MlaE GUI12_01480 PF00005 ABC transporter GUI12_01485 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GUI12_01485 PF02222 ATP-grasp domain GUI12_01490 PF01790 Prolipoprotein diacylglyceryl transferase GUI12_01495 PF06071 Protein of unknown function (DUF933) GUI12_01495 PF01926 50S ribosome-binding GTPase GUI12_01500 PF01134 Glucose inhibited division protein A GUI12_01500 PF13932 GidA associated domain GUI12_01510 PF00270 DEAD/DEAH box helicase GUI12_01510 PF17764 3′ DNA-binding domain (3′BD) GUI12_01510 PF18074 Primosomal protein N C-terminal domain GUI12_01510 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GUI12_01530 PF01966 HD domain GUI12_01530 PF13286 Phosphohydrolase-associated domain GUI12_01545 PF02132 RecR protein GUI12_01545 PF13662 Toprim domain GUI12_01550 PF00919 Uncharacterized protein family UPF0004 GUI12_01550 PF04055 Radical SAM superfamily GUI12_01555 PF00701 Dihydrodipicolinate synthetase family GUI12_01560 PF00117 Glutamine amidotransferase class-I GUI12_01560 PF00958 GMP synthase C terminal domain GUI12_01560 PF02540 NAD synthase GUI12_01575 PF00460 Flagella basal body rod protein GUI12_01575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GUI12_01580 PF13144 Chaperone for flagella basal body P-ring formation GUI12_01605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GUI12_01605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GUI12_01605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GUI12_01605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GUI12_01615 PF00696 Amino acid kinase family GUI12_01620 PF07992 Pyridine nucleotide-disulphide oxidoreductase GUI12_01625 PF00550 Phosphopantetheine attachment site GUI12_01630 PF00109 Beta-ketoacyl synthase, N-terminal domain GUI12_01630 PF02801 Beta-ketoacyl synthase, C-terminal domain GUI12_01635 PF02618 YceG-like family GUI12_01640 PF02660 Glycerol-3-phosphate acyltransferase GUI12_01645 PF03717 Penicillin-binding Protein dimerisation domain GUI12_01645 PF00905 Penicillin binding protein transpeptidase domain GUI12_01720 PF00899 ThiF family GUI12_01730 PF12804 MobA-like NTP transferase domain GUI12_01735 PF02391 MoaE protein GUI12_01745 PF03453 MoeA N-terminal region (domain I and II) GUI12_01745 PF03454 MoeA C-terminal region (domain IV) GUI12_01745 PF00994 Probable molybdopterin binding domain GUI12_01750 PF01967 MoaC family GUI12_01750 PF00994 Probable molybdopterin binding domain GUI12_01755 PF06463 Molybdenum Cofactor Synthesis C GUI12_01755 PF04055 Radical SAM superfamily GUI12_01760 PF07690 Major Facilitator Superfamily GUI12_01765 PF00384 Molybdopterin oxidoreductase GUI12_01765 PF01568 Molydopterin dinucleotide binding domain GUI12_01765 PF14710 Respiratory nitrate reductase alpha N-terminal GUI12_01770 PF13247 4Fe-4S dicluster domain GUI12_01770 PF14711 Respiratory nitrate reductase beta C-terminal GUI12_01775 PF02613 Nitrate reductase delta subunit GUI12_01780 PF02665 Nitrate reductase gamma subunit GUI12_01805 PF00293 NUDIX domain GUI12_01805 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain GUI12_01805 PF09297 NADH pyrophosphatase zinc ribbon domain GUI12_01815 PF01494 FAD binding domain GUI12_01835 PF00892 EamA-like transporter family GUI12_01860 PF02769 AIR synthase related protein, C-terminal domain GUI12_01860 PF00586 AIR synthase related protein, N-terminal domain GUI12_01865 PF00579 tRNA synthetases class I (W and Y) GUI12_01870 PF00775 Dioxygenase GUI12_01875 PF00312 Ribosomal protein S15 GUI12_01880 PF00013 KH domain GUI12_01880 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GUI12_01880 PF01138 3' exoribonuclease family, domain 1 GUI12_01880 PF03725 3' exoribonuclease family, domain 2 GUI12_01880 PF00575 S1 RNA binding domain GUI12_01885 PF02934 GatB/GatE catalytic domain GUI12_01885 PF02637 GatB domain GUI12_01900 PF02767 DNA polymerase III beta subunit, central domain GUI12_01900 PF02768 DNA polymerase III beta subunit, C-terminal domain GUI12_01900 PF00712 DNA polymerase III beta subunit, N-terminal domain GUI12_01905 PF01678 Diaminopimelate epimerase GUI12_01950 PF03129 Anticodon binding domain GUI12_01950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GUI12_01955 PF03477 ATP cone domain GUI12_01955 PF02867 Ribonucleotide reductase, barrel domain GUI12_01955 PF00317 Ribonucleotide reductase, all-alpha domain GUI12_01960 PF00676 Dehydrogenase E1 component GUI12_01960 PF16078 2-oxoglutarate dehydrogenase N-terminus GUI12_01960 PF02779 Transketolase, pyrimidine binding domain GUI12_01960 PF16870 2-oxoglutarate dehydrogenase C-terminal GUI12_01975 PF01523 Putative modulator of DNA gyrase GUI12_01985 PF05198 Translation initiation factor IF-3, N-terminal domain GUI12_01985 PF00707 Translation initiation factor IF-3, C-terminal domain GUI12_01990 PF03129 Anticodon binding domain GUI12_01990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GUI12_01990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GUI12_02000 PF01351 Ribonuclease HII GUI12_02005 PF00679 Elongation factor G C-terminus GUI12_02005 PF14492 Elongation Factor G, domain II GUI12_02005 PF00009 Elongation factor Tu GTP binding domain GUI12_02005 PF03144 Elongation factor Tu domain 2 GUI12_02005 PF06421 GTP-binding protein LepA C-terminus GUI12_02025 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GUI12_02030 PF00471 Ribosomal protein L33 GUI12_02045 PF00521 DNA gyrase/topoisomerase IV, subunit A GUI12_02045 PF03989 DNA gyrase C-terminal domain, beta-propeller GUI12_02050 PF10576 Iron-sulfur binding domain of endonuclease III GUI12_02050 PF00633 Helix-hairpin-helix motif GUI12_02050 PF00730 HhH-GPD superfamily base excision DNA repair protein GUI12_02055 PF02875 Mur ligase family, glutamate ligase domain GUI12_02055 PF08245 Mur ligase middle domain GUI12_02060 PF01467 Cytidylyltransferase-like GUI12_02065 PF05193 Peptidase M16 inactive domain GUI12_02065 PF00675 Insulinase (Peptidase family M16) GUI12_02070 PF00227 Proteasome subunit GUI12_02075 PF07724 AAA domain (Cdc48 subfamily) GUI12_02075 PF00493 MCM P-loop domain GUI12_02075 PF10431 C-terminal, D2-small domain, of ClpB protein GUI12_02080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GUI12_02085 PF02542 YgbB family GUI12_02090 PF01245 Ribosomal protein L19 GUI12_02095 PF01746 tRNA (Guanine-1)-methyltransferase GUI12_02100 PF05239 PRC-barrel domain GUI12_02100 PF01782 RimM N-terminal domain GUI12_02105 PF00886 Ribosomal protein S16 GUI12_02110 PF02021 Uncharacterised protein family UPF0102 GUI12_02115 PF07992 Pyridine nucleotide-disulphide oxidoreductase GUI12_02115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GUI12_02120 PF01259 SAICAR synthetase GUI12_02125 PF03477 ATP cone domain GUI12_02130 PF02899 Phage integrase, N-terminal SAM-like domain GUI12_02130 PF00589 Phage integrase family GUI12_02135 PF04002 RadC-like JAB domain GUI12_02140 PF00288 GHMP kinases N terminal domain GUI12_02140 PF08544 GHMP kinases C terminal GUI12_02150 PF01256 Carbohydrate kinase GUI12_02150 PF03853 YjeF-related protein N-terminus GUI12_02155 PF00772 DnaB-like helicase N terminal domain GUI12_02155 PF03796 DnaB-like helicase C terminal domain GUI12_02160 PF00462 Glutaredoxin GUI12_02165 PF01513 ATP-NAD kinase GUI12_02170 PF01121 Dephospho-CoA kinase GUI12_02175 PF00571 CBS domain GUI12_02175 PF00478 IMP dehydrogenase / GMP reductase domain GUI12_02180 PF03109 ABC1 family GUI12_02185 PF00005 ABC transporter GUI12_02190 PF00121 Triosephosphate isomerase GUI12_02195 PF01218 Coproporphyrinogen III oxidase GUI12_02200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GUI12_02200 PF01565 FAD binding domain GUI12_02210 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GUI12_02215 PF02556 Preprotein translocase subunit SecB GUI12_02225 PF02390 Putative methyltransferase GUI12_02230 PF01343 Peptidase family S49 GUI12_02235 PF00575 S1 RNA binding domain GUI12_02240 PF00588 SpoU rRNA Methylase family GUI12_02240 PF08032 RNA 2'-O ribose methyltransferase substrate binding GUI12_02255 PF00338 Ribosomal protein S10p/S20e GUI12_02260 PF00297 Ribosomal protein L3 GUI12_02265 PF00573 Ribosomal protein L4/L1 family GUI12_02270 PF00276 Ribosomal protein L23 GUI12_02275 PF03947 Ribosomal Proteins L2, C-terminal domain GUI12_02275 PF00181 Ribosomal Proteins L2, RNA binding domain GUI12_02280 PF00203 Ribosomal protein S19 GUI12_02285 PF00237 Ribosomal protein L22p/L17e GUI12_02290 PF07650 KH domain GUI12_02290 PF00189 Ribosomal protein S3, C-terminal domain GUI12_02295 PF00252 Ribosomal protein L16p/L10e GUI12_02305 PF00366 Ribosomal protein S17 GUI12_02310 PF00238 Ribosomal protein L14p/L23e GUI12_02315 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GUI12_02315 PF00467 KOW motif GUI12_02320 PF00281 Ribosomal protein L5 GUI12_02320 PF00673 ribosomal L5P family C-terminus GUI12_02325 PF00253 Ribosomal protein S14p/S29e GUI12_02330 PF00410 Ribosomal protein S8 GUI12_02335 PF00347 Ribosomal protein L6 GUI12_02340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GUI12_02345 PF00333 Ribosomal protein S5, N-terminal domain GUI12_02345 PF03719 Ribosomal protein S5, C-terminal domain GUI12_02355 PF00344 SecY translocase GUI12_02360 PF05191 Adenylate kinase, active site lid GUI12_02365 PF00416 Ribosomal protein S13/S18 GUI12_02370 PF00411 Ribosomal protein S11 GUI12_02375 PF01000 RNA polymerase Rpb3/RpoA insert domain GUI12_02375 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GUI12_02375 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GUI12_02380 PF01196 Ribosomal protein L17 GUI12_02405 PF02401 LytB protein GUI12_02410 PF01098 Cell cycle protein GUI12_02430 PF01795 MraW methylase family GUI12_02435 PF00989 PAS fold GUI12_02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GUI12_02435 PF00512 His Kinase A (phospho-acceptor) domain GUI12_02435 PF13188 PAS domain GUI12_02445 PF07977 FabA-like domain GUI12_02455 PF00308 Bacterial dnaA protein GUI12_02455 PF08299 Bacterial dnaA protein helix-turn-helix GUI12_02455 PF11638 DnaA N-terminal domain GUI12_02465 PF00448 SRP54-type protein, GTPase domain GUI12_02465 PF02881 SRP54-type protein, helical bundle domain GUI12_02525 PF06418 CTP synthase N-terminus GUI12_02525 PF00117 Glutamine amidotransferase class-I GUI12_02530 PF00510 Cytochrome c oxidase subunit III GUI12_02540 PF01118 Semialdehyde dehydrogenase, NAD binding domain GUI12_02540 PF02774 Semialdehyde dehydrogenase, dimerisation domain GUI12_02545 PF07690 Major Facilitator Superfamily GUI12_02550 PF07690 Major Facilitator Superfamily GUI12_02560 PF17757 UvrB interaction domain GUI12_02560 PF03461 TRCF domain GUI12_02560 PF00271 Helicase conserved C-terminal domain GUI12_02560 PF02559 CarD-like/TRCF domain GUI12_02560 PF00270 DEAD/DEAH box helicase GUI12_02565 PF02646 RmuC family GUI12_02570 PF07478 D-ala D-ala ligase C-terminus GUI12_02570 PF01820 D-ala D-ala ligase N-terminus GUI12_02575 PF03799 Cell division protein FtsQ GUI12_02575 PF08478 POTRA domain, FtsQ-type GUI12_02580 PF00120 Glutamine synthetase, catalytic domain GUI12_02580 PF03951 Glutamine synthetase, beta-Grasp domain GUI12_02585 PF01230 HIT domain GUI12_02600 PF01668 SmpB protein GUI12_02605 PF09190 DALR domain GUI12_02605 PF01406 tRNA synthetases class I (C) catalytic domain GUI12_02615 PF11953 Domain of unknown function (DUF3470) GUI12_02615 PF00037 4Fe-4S binding domain GUI12_02625 PF01026 TatD related DNase GUI12_02630 PF00132 Bacterial transferase hexapeptide (six repeats) GUI12_02630 PF14602 Hexapeptide repeat of succinyl-transferase GUI12_02630 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GUI12_02635 PF01312 FlhB HrpN YscU SpaS Family GUI12_02640 PF02630 SCO1/SenC GUI12_02645 PF10609 NUBPL iron-transfer P-loop NTPase GUI12_02650 PF02355 Protein export membrane protein GUI12_02655 PF00456 Transketolase, thiamine diphosphate binding domain GUI12_02655 PF02779 Transketolase, pyrimidine binding domain GUI12_02655 PF02780 Transketolase, C-terminal domain GUI12_02660 PF00361 Proton-conducting membrane transporter GUI12_02670 PF08463 EcoEI R protein C-terminal GUI12_02670 PF00271 Helicase conserved C-terminal domain GUI12_02670 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GUI12_02670 PF04851 Type III restriction enzyme, res subunit GUI12_02675 PF04546 Sigma-70, non-essential region GUI12_02675 PF03979 Sigma-70 factor, region 1.1 GUI12_02675 PF00140 Sigma-70 factor, region 1.2 GUI12_02675 PF04542 Sigma-70 region 2 GUI12_02675 PF04539 Sigma-70 region 3 GUI12_02675 PF04545 Sigma-70, region 4 GUI12_02680 PF03462 PCRF domain GUI12_02680 PF00472 RF-1 domain GUI12_02695 PF01209 ubiE/COQ5 methyltransferase family GUI12_02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GUI12_02700 PF00512 His Kinase A (phospho-acceptor) domain GUI12_02700 PF08448 PAS fold GUI12_02700 PF13188 PAS domain GUI12_02700 PF00072 Response regulator receiver domain GUI12_02710 PF13085 2Fe-2S iron-sulfur cluster binding domain GUI12_02715 PF01300 Telomere recombination GUI12_02720 PF12706 Beta-lactamase superfamily domain GUI12_02735 PF00163 Ribosomal protein S4/S9 N-terminal domain GUI12_02735 PF01479 S4 domain GUI12_02740 PF00528 Binding-protein-dependent transport system inner membrane component GUI12_02745 PF01494 FAD binding domain GUI12_02750 PF10531 SLBB domain GUI12_02750 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GUI12_02750 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GUI12_02755 PF01921 tRNA synthetases class I (K) GUI12_02760 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GUI12_02760 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GUI12_02765 PF01578 Cytochrome C assembly protein GUI12_02770 PF01018 GTP1/OBG GUI12_02770 PF01926 50S ribosome-binding GTPase GUI12_02775 PF10431 C-terminal, D2-small domain, of ClpB protein GUI12_02775 PF02861 Clp amino terminal domain, pathogenicity island component GUI12_02775 PF17871 AAA lid domain GUI12_02775 PF00004 ATPase family associated with various cellular activities (AAA) GUI12_02775 PF07724 AAA domain (Cdc48 subfamily) GUI12_02780 PF02617 ATP-dependent Clp protease adaptor protein ClpS GUI12_02785 PF00005 ABC transporter GUI12_02795 PF00270 DEAD/DEAH box helicase GUI12_02795 PF00271 Helicase conserved C-terminal domain GUI12_02795 PF17191 RecG wedge domain GUI12_02800 PF02386 Cation transport protein GUI12_02805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GUI12_02805 PF02142 MGS-like domain GUI12_02805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GUI12_02815 PF07992 Pyridine nucleotide-disulphide oxidoreductase GUI12_02830 PF00698 Acyl transferase domain GUI12_02845 PF07992 Pyridine nucleotide-disulphide oxidoreductase GUI12_02850 PF01479 S4 domain GUI12_02850 PF00849 RNA pseudouridylate synthase GUI12_02865 PF13180 PDZ domain GUI12_02870 PF01145 SPFH domain / Band 7 family GUI12_02875 PF01145 SPFH domain / Band 7 family GUI12_02880 PF02511 Thymidylate synthase complementing protein GUI12_02885 PF01258 Prokaryotic dksA/traR C4-type zinc finger GUI12_02920 PF00719 Inorganic pyrophosphatase GUI12_02925 PF00113 Enolase, C-terminal TIM barrel domain GUI12_02925 PF03952 Enolase, N-terminal domain GUI12_02930 PF01743 Poly A polymerase head domain GUI12_02930 PF12627 Probable RNA and SrmB- binding site of polymerase A GUI12_02930 PF13735 tRNA nucleotidyltransferase domain 2 putative GUI12_02940 PF00849 RNA pseudouridylate synthase GUI12_02940 PF01479 S4 domain GUI12_02945 PF07992 Pyridine nucleotide-disulphide oxidoreductase GUI12_02950 PF10417 C-terminal domain of 1-Cys peroxiredoxin GUI12_02950 PF00578 AhpC/TSA family GUI12_02965 PF00625 Guanylate kinase GUI12_02975 PF01119 DNA mismatch repair protein, C-terminal domain GUI12_02975 PF08676 MutL C terminal dimerisation domain GUI12_02980 PF01321 Creatinase/Prolidase N-terminal domain GUI12_02980 PF00557 Metallopeptidase family M24 GUI12_02985 PF02628 Cytochrome oxidase assembly protein GUI12_02990 PF03372 Endonuclease/Exonuclease/phosphatase family GUI12_03005 PF03471 Transporter associated domain GUI12_03005 PF03741 Integral membrane protein TerC family GUI12_03010 PF00664 ABC transporter transmembrane region GUI12_03010 PF00005 ABC transporter GUI12_03015 PF00180 Isocitrate/isopropylmalate dehydrogenase GUI12_03015 PF18324 Hypothetical protein TT1725 GUI12_03030 PF06689 ClpX C4-type zinc finger GUI12_03030 PF10431 C-terminal, D2-small domain, of ClpB protein GUI12_03030 PF07724 AAA domain (Cdc48 subfamily) GUI12_03035 PF00574 Clp protease GUI12_03040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GUI12_03040 PF05698 Bacterial trigger factor protein (TF) C-terminus GUI12_03040 PF05697 Bacterial trigger factor protein (TF) GUI12_03065 PF02779 Transketolase, pyrimidine binding domain GUI12_03065 PF02780 Transketolase, C-terminal domain GUI12_03075 PF00162 Phosphoglycerate kinase GUI12_03080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GUI12_03080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GUI12_03085 PF12804 MobA-like NTP transferase domain GUI12_03085 PF00132 Bacterial transferase hexapeptide (six repeats) GUI12_03095 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GUI12_03095 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GUI12_03105 PF01040 UbiA prenyltransferase family GUI12_03110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GUI12_03110 PF01872 RibD C-terminal domain GUI12_03115 PF07676 WD40-like Beta Propeller Repeat GUI12_03115 PF04052 TolB amino-terminal domain GUI12_03120 PF10502 Signal peptidase, peptidase S26 GUI12_03125 PF02441 Flavoprotein GUI12_03125 PF04127 DNA / pantothenate metabolism flavoprotein GUI12_03130 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GUI12_03130 PF01578 Cytochrome C assembly protein GUI12_03140 PF01255 Putative undecaprenyl diphosphate synthase GUI12_03145 PF01765 Ribosome recycling factor GUI12_03150 PF00696 Amino acid kinase family GUI12_03155 PF00889 Elongation factor TS GUI12_03160 PF00318 Ribosomal protein S2 GUI12_03165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GUI12_03165 PF00364 Biotin-requiring enzyme GUI12_03165 PF02817 e3 binding domain GUI12_03170 PF02223 Thymidylate kinase GUI12_03175 PF02463 RecF/RecN/SMC N terminal domain GUI12_03190 PF01098 Cell cycle protein GUI12_03195 PF00334 Nucleoside diphosphate kinase GUI12_03200 PF01103 Surface antigen GUI12_03200 PF07244 Surface antigen variable number repeat GUI12_03205 PF02163 Peptidase family M50 GUI12_03205 PF17820 PDZ domain GUI12_03210 PF00183 Hsp90 protein GUI12_03215 PF04101 Glycosyltransferase family 28 C-terminal domain GUI12_03215 PF03033 Glycosyltransferase family 28 N-terminal domain GUI12_03230 PF00009 Elongation factor Tu GTP binding domain GUI12_03230 PF11987 Translation-initiation factor 2 GUI12_03230 PF04760 Translation initiation factor IF-2, N-terminal region GUI12_03235 PF13184 NusA-like KH domain GUI12_03235 PF08529 NusA N-terminal domain GUI12_03235 PF00575 S1 RNA binding domain GUI12_03240 PF00268 Ribonucleotide reductase, small chain GUI12_03250 PF00155 Aminotransferase class I and II GUI12_03260 PF00072 Response regulator receiver domain GUI12_03260 PF00990 Diguanylate cyclase, GGDEF domain GUI12_03265 PF02416 mttA/Hcf106 family GUI12_03270 PF05088 Bacterial NAD-glutamate dehydrogenase GUI12_03295 PF00813 FliP family GUI12_03300 PF01368 DHH family GUI12_03300 PF02272 DHHA1 domain GUI12_03300 PF17768 RecJ OB domain GUI12_03305 PF00271 Helicase conserved C-terminal domain GUI12_03305 PF04851 Type III restriction enzyme, res subunit GUI12_03305 PF02151 UvrB/uvrC motif GUI12_03305 PF12344 Ultra-violet resistance protein B GUI12_03305 PF17757 UvrB interaction domain GUI12_03310 PF00830 Ribosomal L28 family GUI12_03315 PF04055 Radical SAM superfamily GUI12_03315 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GUI12_03325 PF00579 tRNA synthetases class I (W and Y) GUI12_03330 PF01025 GrpE GUI12_03345 PF03364 Polyketide cyclase / dehydrase and lipid transport GUI12_03350 PF00488 MutS domain V GUI12_03350 PF01624 MutS domain I GUI12_03350 PF05188 MutS domain II GUI12_03350 PF05192 MutS domain III GUI12_03350 PF05190 MutS family domain IV GUI12_03360 PF01926 50S ribosome-binding GTPase GUI12_03360 PF07650 KH domain GUI12_03375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GUI12_03375 PF00460 Flagella basal body rod protein GUI12_03390 PF00905 Penicillin binding protein transpeptidase domain GUI12_03390 PF17092 Penicillin-binding protein OB-like domain GUI12_03390 PF00912 Transglycosylase GUI12_03395 PF13361 UvrD-like helicase C-terminal domain GUI12_03395 PF00580 UvrD/REP helicase N-terminal domain GUI12_03400 PF05000 RNA polymerase Rpb1, domain 4 GUI12_03400 PF04998 RNA polymerase Rpb1, domain 5 GUI12_03400 PF04983 RNA polymerase Rpb1, domain 3 GUI12_03400 PF00623 RNA polymerase Rpb1, domain 2 GUI12_03400 PF04997 RNA polymerase Rpb1, domain 1 GUI12_03405 PF04563 RNA polymerase beta subunit GUI12_03405 PF04561 RNA polymerase Rpb2, domain 2 GUI12_03405 PF04565 RNA polymerase Rpb2, domain 3 GUI12_03405 PF10385 RNA polymerase beta subunit external 1 domain GUI12_03405 PF00562 RNA polymerase Rpb2, domain 6 GUI12_03405 PF04560 RNA polymerase Rpb2, domain 7 GUI12_03420 PF00687 Ribosomal protein L1p/L10e family GUI12_03425 PF00298 Ribosomal protein L11, RNA binding domain GUI12_03425 PF03946 Ribosomal protein L11, N-terminal domain GUI12_03440 PF03143 Elongation factor Tu C-terminal domain GUI12_03440 PF03144 Elongation factor Tu domain 2 GUI12_03440 PF00009 Elongation factor Tu GTP binding domain GUI12_03445 PF00679 Elongation factor G C-terminus GUI12_03445 PF14492 Elongation Factor G, domain II GUI12_03445 PF03764 Elongation factor G, domain IV GUI12_03445 PF00009 Elongation factor Tu GTP binding domain GUI12_03445 PF03144 Elongation factor Tu domain 2 GUI12_03450 PF00177 Ribosomal protein S7p/S5e GUI12_03455 PF00164 Ribosomal protein S12/S23 GUI12_03465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GUI12_03470 PF00118 TCP-1/cpn60 chaperonin family GUI12_03475 PF00166 Chaperonin 10 Kd subunit GUI12_03490 PF01396 Topoisomerase DNA binding C4 zinc finger GUI12_03490 PF01751 Toprim domain GUI12_03490 PF13368 Topoisomerase C-terminal repeat GUI12_03490 PF01131 DNA topoisomerase GUI12_03505 PF03023 Lipid II flippase MurJ GUI12_03515 PF00731 AIR carboxylase GUI12_03520 PF02075 Crossover junction endodeoxyribonuclease RuvC GUI12_03525 PF02673 Bacitracin resistance protein BacA GUI12_03530 PF05746 DALR anticodon binding domain GUI12_03530 PF02092 Glycyl-tRNA synthetase beta subunit GUI12_03535 PF02091 Glycyl-tRNA synthetase alpha subunit GUI12_03550 PF00749 tRNA synthetases class I (E and Q), catalytic domain GUI12_03555 PF03144 Elongation factor Tu domain 2 GUI12_03555 PF00679 Elongation factor G C-terminus GUI12_03555 PF00009 Elongation factor Tu GTP binding domain GUI12_03560 PF02780 Transketolase, C-terminal domain GUI12_03560 PF02779 Transketolase, pyrimidine binding domain GUI12_03560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GUI12_03565 PF01425 Amidase GUI12_03570 PF00581 Rhodanese-like domain GUI12_03570 PF17773 UPF0176 acylphosphatase like domain GUI12_03575 PF02899 Phage integrase, N-terminal SAM-like domain GUI12_03575 PF00589 Phage integrase family GUI12_03580 PF00390 Malic enzyme, N-terminal domain GUI12_03580 PF03949 Malic enzyme, NAD binding domain GUI12_03580 PF01515 Phosphate acetyl/butaryl transferase GUI12_03585 PF08402 TOBE domain GUI12_03585 PF00005 ABC transporter GUI12_03590 PF02416 mttA/Hcf106 family GUI12_03610 PF08378 Nuclease-related domain GUI12_03615 PF01380 SIS domain GUI12_03620 PF00749 tRNA synthetases class I (E and Q), catalytic domain GUI12_03625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GUI12_03625 PF02843 Phosphoribosylglycinamide synthetase, C domain GUI12_03625 PF02844 Phosphoribosylglycinamide synthetase, N domain GUI12_03635 PF02481 DNA recombination-mediator protein A GUI12_03645 PF08338 Domain of unknown function (DUF1731) GUI12_03645 PF01370 NAD dependent epimerase/dehydratase family GUI12_03665 PF00557 Metallopeptidase family M24 GUI12_03670 PF00448 SRP54-type protein, GTPase domain GUI12_03670 PF02881 SRP54-type protein, helical bundle domain GUI12_03670 PF02978 Signal peptide binding domain GUI12_03695 PF01676 Metalloenzyme superfamily GUI12_03695 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GUI12_03715 PF13335 Magnesium chelatase, subunit ChlI C-terminal GUI12_03715 PF01078 Magnesium chelatase, subunit ChlI GUI12_03725 PF01066 CDP-alcohol phosphatidyltransferase GUI12_03730 PF01812 5-formyltetrahydrofolate cyclo-ligase family GUI12_03735 PF01618 MotA/TolQ/ExbB proton channel family GUI12_03740 PF13677 Membrane MotB of proton-channel complex MotA/MotB GUI12_03740 PF00691 OmpA family GUI12_03755 PF02911 Formyl transferase, C-terminal domain GUI12_03755 PF00551 Formyl transferase GUI12_03770 PF08207 Elongation factor P (EF-P) KOW-like domain GUI12_03770 PF01132 Elongation factor P (EF-P) OB domain GUI12_03770 PF09285 Elongation factor P, C-terminal GUI12_03780 PF04551 GcpE protein GUI12_03785 PF00549 CoA-ligase GUI12_03785 PF02629 CoA binding domain GUI12_03790 PF00549 CoA-ligase GUI12_03790 PF08442 ATP-grasp domain GUI12_03795 PF00664 ABC transporter transmembrane region GUI12_03795 PF00005 ABC transporter GUI12_03805 PF00883 Cytosol aminopeptidase family, catalytic domain GUI12_03805 PF02789 Cytosol aminopeptidase family, N-terminal domain GUI12_03810 PF00551 Formyl transferase GUI12_03820 PF01027 Inhibitor of apoptosis-promoting Bax1 GUI12_03825 PF01551 Peptidase family M23 GUI12_03835 PF01316 Arginine repressor, DNA binding domain GUI12_03835 PF02863 Arginine repressor, C-terminal domain GUI12_03840 PF00497 Bacterial extracellular solute-binding proteins, family 3 GUI12_03845 PF00528 Binding-protein-dependent transport system inner membrane component GUI12_03850 PF00005 ABC transporter GUI12_03860 PF01409 tRNA synthetases class II core domain (F) GUI12_03860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GUI12_03865 PF00453 Ribosomal protein L20 GUI12_03870 PF01632 Ribosomal protein L35 GUI12_03890 PF01066 CDP-alcohol phosphatidyltransferase GUI12_03895 PF02666 Phosphatidylserine decarboxylase GUI12_03905 PF00892 EamA-like transporter family GUI12_03910 PF00950 ABC 3 transport family GUI12_03920 PF07690 Major Facilitator Superfamily GUI12_03955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GUI12_03955 PF02874 ATP synthase alpha/beta family, beta-barrel domain GUI12_03955 PF18269 T3SS EscN ATPase C-terminal domain GUI12_03960 PF02534 Type IV secretory system Conjugative DNA transfer GUI12_03965 PF00437 Type II/IV secretion system protein GUI12_03980 PF04335 VirB8 protein GUI12_03985 PF00925 GTP cyclohydrolase II GUI12_03995 PF08459 UvrC Helix-hairpin-helix N-terminal GUI12_03995 PF01541 GIY-YIG catalytic domain GUI12_03995 PF02151 UvrB/uvrC motif GUI12_04000 PF04055 Radical SAM superfamily GUI12_04000 PF00919 Uncharacterized protein family UPF0004 GUI12_04005 PF00035 Double-stranded RNA binding motif GUI12_04005 PF14622 Ribonuclease-III-like GUI12_04015 PF13419 Haloacid dehalogenase-like hydrolase GUI12_04020 PF01063 Amino-transferase class IV GUI12_04025 PF07943 Penicillin-binding protein 5, C-terminal domain GUI12_04025 PF00768 D-alanyl-D-alanine carboxypeptidase GUI12_04030 PF01330 RuvA N terminal domain GUI12_04060 PF05496 Holliday junction DNA helicase RuvB P-loop domain GUI12_04060 PF17864 RuvB AAA lid domain GUI12_04060 PF05491 RuvB C-terminal winged helix domain GUI12_04065 PF00156 Phosphoribosyl transferase domain GUI12_04070 PF08264 Anticodon-binding domain of tRNA GUI12_04070 PF00133 tRNA synthetases class I (I, L, M and V) GUI12_04080 PF00924 Mechanosensitive ion channel GUI12_04085 PF02119 Flagellar P-ring protein GUI12_04090 PF01728 FtsJ-like methyltransferase GUI12_04100 PF02875 Mur ligase family, glutamate ligase domain GUI12_04100 PF08245 Mur ligase middle domain GUI12_04115 PF08245 Mur ligase middle domain GUI12_04120 PF00953 Glycosyl transferase family 4 GUI12_04120 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GUI12_04130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GUI12_04130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GUI12_04140 PF02803 Thiolase, C-terminal domain GUI12_04140 PF00108 Thiolase, N-terminal domain GUI12_04145 PF02322 Cytochrome bd terminal oxidase subunit II GUI12_04150 PF01654 Cytochrome bd terminal oxidase subunit I GUI12_04165 PF00375 Sodium:dicarboxylate symporter family GUI12_04170 PF02107 Flagellar L-ring protein GUI12_04175 PF00596 Class II Aldolase and Adducin N-terminal domain GUI12_04185 PF00005 ABC transporter GUI12_04190 PF05173 Dihydrodipicolinate reductase, C-terminus GUI12_04190 PF01113 Dihydrodipicolinate reductase, N-terminus GUI12_04195 PF01613 Flavin reductase like domain GUI12_04200 PF01040 UbiA prenyltransferase family GUI12_04205 PF01926 50S ribosome-binding GTPase GUI12_04205 PF12631 MnmE helical domain GUI12_04205 PF10396 GTP-binding protein TrmE N-terminus GUI12_04255 PF02504 Fatty acid synthesis protein GUI12_04260 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GUI12_04260 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GUI12_04265 PF00814 Glycoprotease family GUI12_04275 PF03099 Biotin/lipoate A/B protein ligase family GUI12_04280 PF00849 RNA pseudouridylate synthase GUI12_04285 PF13180 PDZ domain GUI12_04285 PF03572 Peptidase family S41 GUI12_04315 PF00137 ATP synthase subunit C GUI12_04320 PF00119 ATP synthase A chain GUI12_04330 PF02472 Biopolymer transport protein ExbD/TolR GUI12_04335 PF01618 MotA/TolQ/ExbB proton channel family GUI12_04340 PF00528 Binding-protein-dependent transport system inner membrane component GUI12_04345 PF03484 tRNA synthetase B5 domain GUI12_04345 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GUI12_04345 PF01588 Putative tRNA binding domain GUI12_04345 PF03483 B3/4 domain GUI12_04345 PF03147 Ferredoxin-fold anticodon binding domain GUI12_04365 PF02403 Seryl-tRNA synthetase N-terminal domain GUI12_04365 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GUI12_04400 PF12706 Beta-lactamase superfamily domain GUI12_04400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GUI12_04400 PF17770 Ribonuclease J C-terminal domain GUI12_04410 PF13537 Glutamine amidotransferase domain GUI12_04410 PF00156 Phosphoribosyl transferase domain GUI12_04415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GUI12_04440 PF00571 CBS domain GUI12_04440 PF01769 Divalent cation transporter GUI12_04440 PF03448 MgtE intracellular N domain GUI12_04445 PF03631 Virulence factor BrkB GUI12_04455 PF02575 YbaB/EbfC DNA-binding family GUI12_04460 PF12169 DNA polymerase III subunits gamma and tau domain III GUI12_04470 PF03060 Nitronate monooxygenase GUI12_04475 PF02699 Preprotein translocase subunit GUI12_04480 PF13662 Toprim domain GUI12_04480 PF08275 DNA primase catalytic core, N-terminal domain GUI12_04480 PF01807 CHC2 zinc finger GUI12_04485 PF01648 4'-phosphopantetheinyl transferase superfamily GUI12_04495 PF00890 FAD binding domain GUI12_04495 PF02910 Fumarate reductase flavoprotein C-term GUI12_04520 PF02578 Multi-copper polyphenol oxidoreductase laccase GUI12_04525 PF02355 Protein export membrane protein GUI12_04525 PF07549 SecD/SecF GG Motif GUI12_04535 PF12327 FtsZ family, C-terminal domain GUI12_04535 PF00091 Tubulin/FtsZ family, GTPase domain GUI12_04540 PF00140 Sigma-70 factor, region 1.2 GUI12_04540 PF04542 Sigma-70 region 2 GUI12_04540 PF04545 Sigma-70, region 4 GUI12_04550 PF00586 AIR synthase related protein, N-terminal domain GUI12_04550 PF02769 AIR synthase related protein, C-terminal domain GUI12_04550 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GUI12_04560 PF00361 Proton-conducting membrane transporter GUI12_04565 PF00361 Proton-conducting membrane transporter GUI12_04570 PF03099 Biotin/lipoate A/B protein ligase family GUI12_04570 PF02237 Biotin protein ligase C terminal domain GUI12_04575 PF00348 Polyprenyl synthetase GUI12_04585 PF01926 50S ribosome-binding GTPase GUI12_04595 PF00771 FHIPEP family GUI12_04605 PF03653 Uncharacterised protein family (UPF0093) GUI12_04610 PF00004 ATPase family associated with various cellular activities (AAA) GUI12_04610 PF05362 Lon protease (S16) C-terminal proteolytic domain GUI12_04610 PF02190 ATP-dependent protease La (LON) substrate-binding domain GUI12_04620 PF01709 Transcriptional regulator GUI12_04635 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GUI12_04635 PF00384 Molybdopterin oxidoreductase GUI12_04635 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GUI12_04640 PF00146 NADH dehydrogenase GUI12_04645 PF00825 Ribonuclease P GUI12_04650 PF00468 Ribosomal protein L34 GUI12_04660 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GUI12_04665 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GUI12_04675 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GUI12_04685 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GUI12_04690 PF03135 CagE, TrbE, VirB family, component of type IV transporter system