locus-tag class description ACH33_00025 PF12169 DNA polymerase III subunits gamma and tau domain III ACH33_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_00030 PF00512 His Kinase A (phospho-acceptor) domain ACH33_00030 PF00989 PAS fold ACH33_00055 PF04454 Encapsulating protein for peroxidase ACH33_00070 PF00440 Bacterial regulatory proteins, tetR family ACH33_00070 PF17932 Tetracyclin repressor-like, C-terminal domain ACH33_00075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACH33_00085 PF14437 MafB19-like deaminase ACH33_00090 PF04199 Putative cyclase ACH33_00095 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ACH33_00095 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ACH33_00100 PF12697 Alpha/beta hydrolase family ACH33_00105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACH33_00105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACH33_00105 PF02770 Acyl-CoA dehydrogenase, middle domain ACH33_00110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACH33_00110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACH33_00115 PF00378 Enoyl-CoA hydratase/isomerase ACH33_00120 PF00158 Sigma-54 interaction domain ACH33_00120 PF02954 Bacterial regulatory protein, Fis family ACH33_00120 PF00989 PAS fold ACH33_00135 PF04012 PspA/IM30 family ACH33_00140 PF00216 Bacterial DNA-binding protein ACH33_00150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_00155 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACH33_00155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACH33_00160 PF01890 Cobalamin synthesis G C-terminus ACH33_00160 PF11761 Cobalamin biosynthesis central region ACH33_00160 PF11760 Cobalamin synthesis G N-terminal ACH33_00165 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_00170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_00175 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_00180 PF01888 CbiD ACH33_00185 PF02570 Precorrin-8X methylmutase ACH33_00190 PF02571 Precorrin-6x reductase CbiJ/CobK ACH33_00195 PF01903 CbiX ACH33_00200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACH33_00200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_00205 PF00005 ABC transporter ACH33_00210 PF02361 Cobalt transport protein ACH33_00215 PF02553 Cobalt transport protein component CbiN ACH33_00220 PF01891 Cobalt uptake substrate-specific transmembrane region ACH33_00250 PF02796 Helix-turn-helix domain of resolvase ACH33_00250 PF00665 Integrase core domain ACH33_00280 PF04237 YjbR ACH33_00290 PF01381 Helix-turn-helix ACH33_00305 PF06039 Malate:quinone oxidoreductase (Mqo) ACH33_00325 PF02403 Seryl-tRNA synthetase N-terminal domain ACH33_00325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACH33_00330 PF07943 Penicillin-binding protein 5, C-terminal domain ACH33_00330 PF00768 D-alanyl-D-alanine carboxypeptidase ACH33_00335 PF00571 CBS domain ACH33_00335 PF00478 IMP dehydrogenase / GMP reductase domain ACH33_00340 PF14175 YaaC-like Protein ACH33_00360 PF03989 DNA gyrase C-terminal domain, beta-propeller ACH33_00360 PF00521 DNA gyrase/topoisomerase IV, subunit A ACH33_00365 PF00986 DNA gyrase B subunit, carboxyl terminus ACH33_00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_00365 PF00204 DNA gyrase B ACH33_00365 PF01751 Toprim domain ACH33_00375 PF02463 RecF/RecN/SMC N terminal domain ACH33_00385 PF02767 DNA polymerase III beta subunit, central domain ACH33_00385 PF02768 DNA polymerase III beta subunit, C-terminal domain ACH33_00385 PF00712 DNA polymerase III beta subunit, N-terminal domain ACH33_00390 PF11638 DnaA N-terminal domain ACH33_00390 PF00308 Bacterial dnaA protein ACH33_00390 PF08299 Bacterial dnaA protein helix-turn-helix ACH33_00395 PF00468 Ribosomal protein L34 ACH33_00400 PF00825 Ribonuclease P ACH33_00405 PF02096 60Kd inner membrane protein ACH33_00410 PF01424 R3H domain ACH33_00410 PF14804 Jag N-terminus ACH33_00415 PF10396 GTP-binding protein TrmE N-terminus ACH33_00415 PF12631 MnmE helical domain ACH33_00415 PF01926 50S ribosome-binding GTPase ACH33_00420 PF01134 Glucose inhibited division protein A ACH33_00420 PF13932 GidA associated domain ACH33_00425 PF02527 rRNA small subunit methyltransferase G ACH33_00435 PF02195 ParB-like nuclease domain ACH33_00435 PF17762 HTH domain found in ParB protein ACH33_00440 PF13614 AAA domain ACH33_00445 PF17762 HTH domain found in ParB protein ACH33_00445 PF02195 ParB-like nuclease domain ACH33_00450 PF00266 Aminotransferase class-V ACH33_00455 PF06866 Protein of unknown function (DUF1256) ACH33_00465 PF00924 Mechanosensitive ion channel ACH33_00470 PF06107 Bacterial protein of unknown function (DUF951) ACH33_00475 PF06071 Protein of unknown function (DUF933) ACH33_00475 PF01926 50S ribosome-binding GTPase ACH33_00480 PF01250 Ribosomal protein S6 ACH33_00485 PF00436 Single-strand binding protein family ACH33_00490 PF01084 Ribosomal protein S18 ACH33_00495 PF09991 Predicted membrane protein (DUF2232) ACH33_00500 PF02272 DHHA1 domain ACH33_00500 PF01368 DHH family ACH33_00505 PF03948 Ribosomal protein L9, C-terminal domain ACH33_00505 PF01281 Ribosomal protein L9, N-terminal domain ACH33_00510 PF03796 DnaB-like helicase C terminal domain ACH33_00510 PF00772 DnaB-like helicase N terminal domain ACH33_00515 PF00709 Adenylosuccinate synthetase ACH33_00520 PF01476 LysM domain ACH33_00520 PF08525 Opacity-associated protein A N-terminal motif ACH33_00520 PF01551 Peptidase family M23 ACH33_00525 PF00072 Response regulator receiver domain ACH33_00525 PF00486 Transcriptional regulatory protein, C terminal ACH33_00530 PF00672 HAMP domain ACH33_00530 PF13426 PAS domain ACH33_00530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_00530 PF00512 His Kinase A (phospho-acceptor) domain ACH33_00535 PF07435 YycH protein ACH33_00540 PF09648 YycH protein ACH33_00545 PF00753 Metallo-beta-lactamase superfamily ACH33_00550 PF13180 PDZ domain ACH33_00560 PF02590 Predicted SPOUT methyltransferase ACH33_00565 PF00005 ABC transporter ACH33_00570 PF01032 FecCD transport family ACH33_00575 PF01032 FecCD transport family ACH33_00580 PF01497 Periplasmic binding protein ACH33_00585 PF13538 UvrD-like helicase C-terminal domain ACH33_00590 PF10415 Fumarase C C-terminus ACH33_00590 PF00206 Lyase ACH33_00605 PF00892 EamA-like transporter family ACH33_00610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_00610 PF03466 LysR substrate binding domain ACH33_00620 PF00672 HAMP domain ACH33_00620 PF02743 Cache domain ACH33_00620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_00625 PF07690 Major Facilitator Superfamily ACH33_00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_00630 PF03466 LysR substrate binding domain ACH33_00635 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACH33_00635 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACH33_00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_00640 PF03466 LysR substrate binding domain ACH33_00650 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ACH33_00650 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACH33_00655 PF04238 Protein of unknown function (DUF420) ACH33_00660 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ACH33_00665 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACH33_00670 PF00510 Cytochrome c oxidase subunit III ACH33_00675 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ACH33_00680 PF08543 Phosphomethylpyrimidine kinase ACH33_00685 PF00440 Bacterial regulatory proteins, tetR family ACH33_00685 PF08360 QacR-like protein, C-terminal region ACH33_00695 PF01904 Protein of unknown function DUF72 ACH33_00700 PF01894 Uncharacterised protein family UPF0047 ACH33_00705 PF01625 Peptide methionine sulfoxide reductase ACH33_00705 PF01641 SelR domain ACH33_00710 PF01235 Sodium:alanine symporter family ACH33_00715 PF01546 Peptidase family M20/M25/M40 ACH33_00725 PF13419 Haloacid dehalogenase-like hydrolase ACH33_00730 PF17912 MalK OB fold domain ACH33_00730 PF00005 ABC transporter ACH33_00730 PF03459 TOBE domain ACH33_00735 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_00740 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_00745 PF01547 Bacterial extracellular solute-binding protein ACH33_00750 PF03009 Glycerophosphoryl diester phosphodiesterase family ACH33_00755 PF01047 MarR family ACH33_00765 PF07690 Major Facilitator Superfamily ACH33_00780 PF04389 Peptidase family M28 ACH33_00785 PF09021 HutP ACH33_00790 PF00221 Aromatic amino acid lyase ACH33_00795 PF00005 ABC transporter ACH33_00800 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACH33_00805 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_00810 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_00815 PF17284 Spermidine synthase tetramerisation domain ACH33_00820 PF01235 Sodium:alanine symporter family ACH33_00900 PF00378 Enoyl-CoA hydratase/isomerase ACH33_00915 PF05816 Toxic anion resistance protein (TelA) ACH33_00920 PF00753 Metallo-beta-lactamase superfamily ACH33_00940 PF03741 Integral membrane protein TerC family ACH33_00995 PF01521 Iron-sulphur cluster biosynthesis ACH33_01000 PF03422 Carbohydrate binding module (family 6) ACH33_01000 PF00457 Glycosyl hydrolases family 11 ACH33_01000 PF01522 Polysaccharide deacetylase ACH33_01005 PF02386 Cation transport protein ACH33_01010 PF00005 ABC transporter ACH33_01030 PF09339 IclR helix-turn-helix domain ACH33_01030 PF01614 Bacterial transcriptional regulator ACH33_01035 PF02682 Carboxyltransferase domain, subdomain C and D ACH33_01040 PF02626 Carboxyltransferase domain, subdomain A and B ACH33_01045 PF03746 LamB/YcsF family ACH33_01070 PF04241 Protein of unknown function (DUF423) ACH33_01075 PF07940 Heparinase II/III-like protein ACH33_01075 PF05426 Alginate lyase ACH33_01080 PF03631 Virulence factor BrkB ACH33_01085 PF17785 PUA-like domain ACH33_01085 PF10672 S-adenosylmethionine-dependent methyltransferase ACH33_01090 PF00892 EamA-like transporter family ACH33_01100 PF00005 ABC transporter ACH33_01105 PF05975 Bacterial ABC transporter protein EcsB ACH33_01110 PF01545 Cation efflux family ACH33_01110 PF16916 Dimerisation domain of Zinc Transporter ACH33_01120 PF13537 Glutamine amidotransferase domain ACH33_01120 PF00733 Asparagine synthase ACH33_01130 PF07293 Protein of unknown function (DUF1450) ACH33_01140 PF02254 TrkA-N domain ACH33_01140 PF02080 TrkA-C domain ACH33_01140 PF00999 Sodium/hydrogen exchanger family ACH33_01145 PF07070 SpoOM protein ACH33_01150 PF01479 S4 domain ACH33_01150 PF00849 RNA pseudouridylate synthase ACH33_01155 PF01966 HD domain ACH33_01160 PF08741 YwhD family ACH33_01165 PF00912 Transglycosylase ACH33_01165 PF00905 Penicillin binding protein transpeptidase domain ACH33_01175 PF17284 Spermidine synthase tetramerisation domain ACH33_01180 PF00491 Arginase family ACH33_01190 PF03485 Arginyl tRNA synthetase N terminal domain ACH33_01190 PF00750 tRNA synthetases class I (R) ACH33_01190 PF05746 DALR anticodon binding domain ACH33_01195 PF01695 IstB-like ATP binding protein ACH33_01200 PF02796 Helix-turn-helix domain of resolvase ACH33_01200 PF00665 Integrase core domain ACH33_01270 PF02754 Cysteine-rich domain ACH33_01270 PF13183 4Fe-4S dicluster domain ACH33_01275 PF02803 Thiolase, C-terminal domain ACH33_01275 PF00108 Thiolase, N-terminal domain ACH33_01285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACH33_01285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACH33_01290 PF02770 Acyl-CoA dehydrogenase, middle domain ACH33_01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACH33_01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACH33_01295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACH33_01295 PF02770 Acyl-CoA dehydrogenase, middle domain ACH33_01295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACH33_01310 PF02310 B12 binding domain ACH33_01310 PF01642 Methylmalonyl-CoA mutase ACH33_01315 PF05066 HB1, ASXL, restriction endonuclease HTH domain ACH33_01320 PF06418 CTP synthase N-terminus ACH33_01320 PF00117 Glutamine amidotransferase class-I ACH33_01325 PF00072 Response regulator receiver domain ACH33_01330 PF01116 Fructose-bisphosphate aldolase class-II ACH33_01335 PF00923 Transaldolase/Fructose-6-phosphate aldolase ACH33_01340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACH33_01345 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ACH33_01350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACH33_01350 PF07498 Rho termination factor, N-terminal domain ACH33_01350 PF07497 Rho termination factor, RNA-binding domain ACH33_01355 PF02673 Bacitracin resistance protein BacA ACH33_01360 PF02386 Cation transport protein ACH33_01370 PF01197 Ribosomal protein L31 ACH33_01375 PF00265 Thymidine kinase ACH33_01385 PF00472 RF-1 domain ACH33_01385 PF03462 PCRF domain ACH33_01390 PF13847 Methyltransferase domain ACH33_01390 PF17827 PrmC N-terminal domain ACH33_01395 PF09551 Stage II sporulation protein R (spore_II_R) ACH33_01400 PF01300 Telomere recombination ACH33_01400 PF03481 Putative GTP-binding controlling metal-binding ACH33_01405 PF02659 Putative manganese efflux pump ACH33_01425 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACH33_01430 PF12729 Four helix bundle sensory module for signal transduction ACH33_01430 PF00672 HAMP domain ACH33_01430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_01435 PF02502 Ribose/Galactose Isomerase ACH33_01440 PF04260 Protein of unknown function (DUF436) ACH33_01445 PF00464 Serine hydroxymethyltransferase ACH33_01455 PF02350 UDP-N-acetylglucosamine 2-epimerase ACH33_01475 PF02803 Thiolase, C-terminal domain ACH33_01475 PF00108 Thiolase, N-terminal domain ACH33_01490 PF00119 ATP synthase A chain ACH33_01495 PF00137 ATP synthase subunit C ACH33_01505 PF00213 ATP synthase delta (OSCP) subunit ACH33_01510 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACH33_01510 PF00306 ATP synthase alpha/beta chain, C terminal domain ACH33_01510 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACH33_01515 PF00231 ATP synthase ACH33_01520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACH33_01520 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACH33_01525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ACH33_01525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ACH33_01530 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACH33_01535 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ACH33_01540 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ACH33_01545 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ACH33_01555 PF00146 NADH dehydrogenase ACH33_01565 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ACH33_01570 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ACH33_01575 PF00361 Proton-conducting membrane transporter ACH33_01575 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus ACH33_01575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ACH33_01580 PF00361 Proton-conducting membrane transporter ACH33_01585 PF00361 Proton-conducting membrane transporter ACH33_01590 PF06612 Protein of unknown function (DUF1146) ACH33_01600 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACH33_01605 PF02028 BCCT, betaine/carnitine/choline family transporter ACH33_01610 PF08486 Stage II sporulation protein ACH33_01615 PF01551 Peptidase family M23 ACH33_01620 PF12116 Stage III sporulation protein D ACH33_01630 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACH33_01630 PF00460 Flagella basal body rod protein ACH33_01635 PF00460 Flagella basal body rod protein ACH33_01635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACH33_01645 PF01037 Lrp/AsnC ligand binding domain ACH33_01650 PF00155 Aminotransferase class I and II ACH33_01655 PF02706 Chain length determinant protein ACH33_01655 PF13807 G-rich domain on putative tyrosine kinase ACH33_01660 PF13614 AAA domain ACH33_01670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ACH33_01670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ACH33_01675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACH33_01680 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACH33_01680 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACH33_01680 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACH33_01695 PF02397 Bacterial sugar transferase ACH33_01700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ACH33_01705 PF02719 Polysaccharide biosynthesis protein ACH33_01710 PF00005 ABC transporter ACH33_01715 PF12704 MacB-like periplasmic core domain ACH33_01715 PF02687 FtsX-like permease family ACH33_01715 PF00005 ABC transporter ACH33_01725 PF13807 G-rich domain on putative tyrosine kinase ACH33_01725 PF02706 Chain length determinant protein ACH33_01750 PF01370 NAD dependent epimerase/dehydratase family ACH33_01760 PF03808 Glycosyl transferase WecB/TagA/CpsF family ACH33_01765 PF00953 Glycosyl transferase family 4 ACH33_01775 PF00395 S-layer homology domain ACH33_01785 PF16363 GDP-mannose 4,6 dehydratase ACH33_01790 PF16363 GDP-mannose 4,6 dehydratase ACH33_01800 PF00005 ABC transporter ACH33_01815 PF13439 Glycosyltransferase Family 4 ACH33_01815 PF00534 Glycosyl transferases group 1 ACH33_01830 PF00483 Nucleotidyl transferase ACH33_01830 PF01050 Mannose-6-phosphate isomerase ACH33_01840 PF00534 Glycosyl transferases group 1 ACH33_01840 PF13439 Glycosyltransferase Family 4 ACH33_01845 PF00534 Glycosyl transferases group 1 ACH33_01845 PF13439 Glycosyltransferase Family 4 ACH33_01850 PF02397 Bacterial sugar transferase ACH33_01905 PF03062 MBOAT, membrane-bound O-acyltransferase family ACH33_01915 PF13180 PDZ domain ACH33_01915 PF01471 Putative peptidoglycan binding domain ACH33_01915 PF03572 Peptidase family S41 ACH33_01925 PF02772 S-adenosylmethionine synthetase, central domain ACH33_01925 PF02773 S-adenosylmethionine synthetase, C-terminal domain ACH33_01925 PF00438 S-adenosylmethionine synthetase, N-terminal domain ACH33_01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_01930 PF07730 Histidine kinase ACH33_01930 PF05384 Sensor protein DegS ACH33_01935 PF00072 Response regulator receiver domain ACH33_01935 PF00196 Bacterial regulatory proteins, luxR family ACH33_01955 PF00271 Helicase conserved C-terminal domain ACH33_01955 PF04851 Type III restriction enzyme, res subunit ACH33_01960 PF00156 Phosphoribosyl transferase domain ACH33_01975 PF08534 Redoxin ACH33_01980 PF04316 Anti-sigma-28 factor, FlgM ACH33_01990 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACH33_01990 PF00460 Flagella basal body rod protein ACH33_01995 PF00700 Bacterial flagellin C-terminal helical region ACH33_01995 PF00669 Bacterial flagellin N-terminal helical region ACH33_02005 PF02623 FliW protein ACH33_02010 PF02599 Global regulator protein family ACH33_02015 PF00669 Bacterial flagellin N-terminal helical region ACH33_02015 PF00700 Bacterial flagellin C-terminal helical region ACH33_02040 PF07195 Flagellar hook-associated protein 2 C-terminus ACH33_02040 PF07196 Flagellin hook IN motif ACH33_02040 PF02465 Flagellar hook-associated protein 2 N-terminus ACH33_02045 PF02561 Flagellar protein FliS ACH33_02070 PF00669 Bacterial flagellin N-terminal helical region ACH33_02070 PF00700 Bacterial flagellin C-terminal helical region ACH33_02075 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_02080 PF00313 'Cold-shock' DNA-binding domain ACH33_02090 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ACH33_02090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ACH33_02100 PF01043 SecA preprotein cross-linking domain ACH33_02100 PF07516 SecA Wing and Scaffold domain ACH33_02100 PF07517 SecA DEAD-like domain ACH33_02105 PF00472 RF-1 domain ACH33_02105 PF03462 PCRF domain ACH33_02110 PF00456 Transketolase, thiamine diphosphate binding domain ACH33_02115 PF02780 Transketolase, C-terminal domain ACH33_02115 PF02779 Transketolase, pyrimidine binding domain ACH33_02120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACH33_02125 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACH33_02125 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACH33_02130 PF00696 Amino acid kinase family ACH33_02135 PF00202 Aminotransferase class-III ACH33_02140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACH33_02140 PF00117 Glutamine amidotransferase class-I ACH33_02145 PF02142 MGS-like domain ACH33_02145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACH33_02145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACH33_02150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACH33_02150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACH33_02170 PF00764 Arginosuccinate synthase ACH33_02175 PF14698 Argininosuccinate lyase C-terminal ACH33_02175 PF00206 Lyase ACH33_02180 PF00005 ABC transporter ACH33_02185 PF18075 FtsX extracellular domain ACH33_02185 PF02687 FtsX-like permease family ACH33_02190 PF01476 LysM domain ACH33_02190 PF01551 Peptidase family M23 ACH33_02195 PF01471 Putative peptidoglycan binding domain ACH33_02195 PF03572 Peptidase family S41 ACH33_02195 PF17820 PDZ domain ACH33_02210 PF12344 Ultra-violet resistance protein B ACH33_02210 PF04851 Type III restriction enzyme, res subunit ACH33_02210 PF00271 Helicase conserved C-terminal domain ACH33_02210 PF02151 UvrB/uvrC motif ACH33_02210 PF17757 UvrB interaction domain ACH33_02215 PF17755 UvrA DNA-binding domain ACH33_02215 PF17760 UvrA interaction domain ACH33_02220 PF02603 HPr Serine kinase N terminus ACH33_02220 PF07475 HPr Serine kinase C-terminal domain ACH33_02225 PF01790 Prolipoprotein diacylglyceryl transferase ACH33_02230 PF13419 Haloacid dehalogenase-like hydrolase ACH33_02235 PF14602 Hexapeptide repeat of succinyl-transferase ACH33_02260 PF13393 Histidyl-tRNA synthetase ACH33_02265 PF01634 ATP phosphoribosyltransferase ACH33_02270 PF00815 Histidinol dehydrogenase ACH33_02275 PF00475 Imidazoleglycerol-phosphate dehydratase ACH33_02280 PF00117 Glutamine amidotransferase class-I ACH33_02285 PF00977 Histidine biosynthesis protein ACH33_02290 PF00977 Histidine biosynthesis protein ACH33_02295 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ACH33_02295 PF01502 Phosphoribosyl-AMP cyclohydrolase ACH33_02310 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_02325 PF03668 P-loop ATPase protein family ACH33_02330 PF01933 Uncharacterised protein family UPF0052 ACH33_02335 PF02650 WhiA C-terminal HTH domain ACH33_02335 PF14527 WhiA LAGLIDADG-like domain ACH33_02335 PF10298 WhiA N-terminal LAGLIDADG-like domain ACH33_02340 PF00381 PTS HPr component phosphorylation site ACH33_02345 PF00574 Clp protease ACH33_02365 PF04963 Sigma-54 factor, core binding domain ACH33_02365 PF00309 Sigma-54 factor, Activator interacting domain (AID) ACH33_02365 PF04552 Sigma-54, DNA binding domain ACH33_02375 PF04198 Putative sugar-binding domain ACH33_02380 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACH33_02380 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACH33_02385 PF00162 Phosphoglycerate kinase ACH33_02390 PF00121 Triosephosphate isomerase ACH33_02395 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ACH33_02395 PF01676 Metalloenzyme superfamily ACH33_02400 PF03952 Enolase, N-terminal domain ACH33_02400 PF00113 Enolase, C-terminal TIM barrel domain ACH33_02405 PF01475 Ferric uptake regulator family ACH33_02410 PF03840 Preprotein translocase SecG subunit ACH33_02415 PF12146 Serine aminopeptidase, S33 ACH33_02420 PF12146 Serine aminopeptidase, S33 ACH33_02425 PF08206 Ribonuclease B OB domain ACH33_02425 PF00575 S1 RNA binding domain ACH33_02425 PF17876 Cold shock domain ACH33_02425 PF00773 RNB domain ACH33_02430 PF01668 SmpB protein ACH33_02465 PF05922 Peptidase inhibitor I9 ACH33_02465 PF00082 Subtilase family ACH33_02475 PF13472 GDSL-like Lipase/Acylhydrolase family ACH33_02490 PF13180 PDZ domain ACH33_02495 PF00072 Response regulator receiver domain ACH33_02495 PF00486 Transcriptional regulatory protein, C terminal ACH33_02500 PF00512 His Kinase A (phospho-acceptor) domain ACH33_02500 PF00672 HAMP domain ACH33_02500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_02505 PF06276 Ferric iron reductase FhuF-like transporter ACH33_02505 PF04183 IucA / IucC family ACH33_02510 PF00083 Sugar (and other) transporter ACH33_02510 PF07690 Major Facilitator Superfamily ACH33_02515 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_02520 PF02423 Ornithine cyclodeaminase/mu-crystallin family ACH33_02525 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACH33_02525 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACH33_02535 PF06276 Ferric iron reductase FhuF-like transporter ACH33_02535 PF04183 IucA / IucC family ACH33_02540 PF06276 Ferric iron reductase FhuF-like transporter ACH33_02540 PF04183 IucA / IucC family ACH33_02555 PF01032 FecCD transport family ACH33_02560 PF01032 FecCD transport family ACH33_02565 PF01497 Periplasmic binding protein ACH33_02570 PF12728 Helix-turn-helix domain ACH33_02570 PF12727 PBP superfamily domain ACH33_02580 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_02585 PF00005 ABC transporter ACH33_02585 PF17845 FbpC C-terminal regulatory nucleotide binding domain ACH33_02590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ACH33_02590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACH33_02595 PF00877 NlpC/P60 family ACH33_02600 PF00565 Staphylococcal nuclease homologue ACH33_02610 PF04134 Protein of unknown function, DUF393 ACH33_02615 PF00881 Nitroreductase family ACH33_02620 PF07687 Peptidase dimerisation domain ACH33_02620 PF01546 Peptidase family M20/M25/M40 ACH33_02625 PF14602 Hexapeptide repeat of succinyl-transferase ACH33_02625 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ACH33_02625 PF00132 Bacterial transferase hexapeptide (six repeats) ACH33_02635 PF03949 Malic enzyme, NAD binding domain ACH33_02635 PF00390 Malic enzyme, N-terminal domain ACH33_02640 PF16197 Ketoacyl-synthetase C-terminal extension ACH33_02640 PF02801 Beta-ketoacyl synthase, C-terminal domain ACH33_02640 PF00109 Beta-ketoacyl synthase, N-terminal domain ACH33_02640 PF14765 Polyketide synthase dehydratase ACH33_02640 PF08240 Alcohol dehydrogenase GroES-like domain ACH33_02640 PF00698 Acyl transferase domain ACH33_02640 PF00550 Phosphopantetheine attachment site ACH33_02640 PF08659 KR domain ACH33_02655 PF00330 Aconitase family (aconitate hydratase) ACH33_02655 PF00694 Aconitase C-terminal domain ACH33_02660 PF09339 IclR helix-turn-helix domain ACH33_02660 PF01614 Bacterial transcriptional regulator ACH33_02675 PF01145 SPFH domain / Band 7 family ACH33_02680 PF11849 Domain of unknown function (DUF3369) ACH33_02685 PF02310 B12 binding domain ACH33_02685 PF02965 Vitamin B12 dependent methionine synthase, activation domain ACH33_02685 PF00809 Pterin binding enzyme ACH33_02685 PF02574 Homocysteine S-methyltransferase ACH33_02685 PF02607 B12 binding domain ACH33_02690 PF02219 Methylenetetrahydrofolate reductase ACH33_02690 PF02574 Homocysteine S-methyltransferase ACH33_02710 PF01580 FtsK/SpoIIIE family ACH33_02710 PF12538 DNA transporter ACH33_02760 PF00579 tRNA synthetases class I (W and Y) ACH33_02765 PF01546 Peptidase family M20/M25/M40 ACH33_02765 PF07687 Peptidase dimerisation domain ACH33_02770 PF01751 Toprim domain ACH33_02780 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ACH33_02780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ACH33_02785 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACH33_02805 PF02630 SCO1/SenC ACH33_02810 PF13556 PucR C-terminal helix-turn-helix domain ACH33_02810 PF06018 CodY GAF-like domain ACH33_02810 PF17853 GGDEF-like domain ACH33_02815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACH33_02815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACH33_02825 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_02830 PF13649 Methyltransferase domain ACH33_02840 PF00005 ABC transporter ACH33_02845 PF02913 FAD linked oxidases, C-terminal domain ACH33_02845 PF01565 FAD binding domain ACH33_02855 PF01594 AI-2E family transporter ACH33_02875 PF00330 Aconitase family (aconitate hydratase) ACH33_02875 PF00694 Aconitase C-terminal domain ACH33_02885 PF07301 Protein of unknown function (DUF1453) ACH33_02890 PF00324 Amino acid permease ACH33_02895 PF00392 Bacterial regulatory proteins, gntR family ACH33_02895 PF07729 FCD domain ACH33_02900 PF02652 L-lactate permease ACH33_02910 PF02627 Carboxymuconolactone decarboxylase family ACH33_02920 PF13185 GAF domain ACH33_02925 PF00171 Aldehyde dehydrogenase family ACH33_02930 PF00202 Aminotransferase class-III ACH33_02935 PF02277 Phosphoribosyltransferase ACH33_02940 PF07690 Major Facilitator Superfamily ACH33_02945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACH33_02945 PF07685 CobB/CobQ-like glutamine amidotransferase domain ACH33_02950 PF14824 Sirohaem biosynthesis protein central ACH33_02955 PF00881 Nitroreductase family ACH33_02960 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ACH33_02960 PF12557 Cob(I)alamin adenosyltransferase N terminal ACH33_02965 PF00155 Aminotransferase class I and II ACH33_02970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ACH33_02975 PF02654 Cobalamin-5-phosphate synthase ACH33_02980 PF00300 Histidine phosphatase superfamily (branch 1) ACH33_02995 PF03186 CobD/Cbib protein ACH33_03010 PF13091 PLD-like domain ACH33_03010 PF13396 Phospholipase_D-nuclease N-terminal ACH33_03015 PF09186 Domain of unknown function (DUF1949) ACH33_03015 PF01205 Uncharacterized protein family UPF0029 ACH33_03020 PF03795 YCII-related domain ACH33_03025 PF02401 LytB protein ACH33_03040 PF13302 Acetyltransferase (GNAT) domain ACH33_03050 PF07875 Coat F domain ACH33_03065 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACH33_03065 PF03807 NADP oxidoreductase coenzyme F420-dependent ACH33_03070 PF00171 Aldehyde dehydrogenase family ACH33_03075 PF01472 PUA domain ACH33_03075 PF00696 Amino acid kinase family ACH33_03080 PF03323 Bacillus/Clostridium GerA spore germination protein ACH33_03085 PF05504 Spore germination B3/ GerAC like, C-terminal ACH33_03100 PF07690 Major Facilitator Superfamily ACH33_03105 PF00005 ABC transporter ACH33_03115 PF00990 Diguanylate cyclase, GGDEF domain ACH33_03120 PF01497 Periplasmic binding protein ACH33_03125 PF01032 FecCD transport family ACH33_03130 PF00005 ABC transporter ACH33_03135 PF03960 ArsC family ACH33_03140 PF00155 Aminotransferase class I and II ACH33_03145 PF00578 AhpC/TSA family ACH33_03150 PF00578 AhpC/TSA family ACH33_03155 PF01597 Glycine cleavage H-protein ACH33_03175 PF04542 Sigma-70 region 2 ACH33_03190 PF00005 ABC transporter ACH33_03195 PF01458 Uncharacterized protein family (UPF0051) ACH33_03200 PF00266 Aminotransferase class-V ACH33_03205 PF01592 NifU-like N terminal domain ACH33_03210 PF01458 Uncharacterized protein family (UPF0051) ACH33_03240 PF01047 MarR family ACH33_03245 PF07690 Major Facilitator Superfamily ACH33_03270 PF01925 Sulfite exporter TauE/SafE ACH33_03275 PF02872 5'-nucleotidase, C-terminal domain ACH33_03285 PF08827 Domain of unknown function (DUF1805) ACH33_03300 PF07690 Major Facilitator Superfamily ACH33_03305 PF00877 NlpC/P60 family ACH33_03310 PF00395 S-layer homology domain ACH33_03320 PF07662 Na+ dependent nucleoside transporter C-terminus ACH33_03320 PF01773 Na+ dependent nucleoside transporter N-terminus ACH33_03325 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ACH33_03325 PF02885 Glycosyl transferase family, helical bundle domain ACH33_03325 PF00591 Glycosyl transferase family, a/b domain ACH33_03330 PF01593 Flavin containing amine oxidoreductase ACH33_03335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_03335 PF00672 HAMP domain ACH33_03335 PF02743 Cache domain ACH33_03340 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ACH33_03345 PF13649 Methyltransferase domain ACH33_03350 PF03734 L,D-transpeptidase catalytic domain ACH33_03355 PF01551 Peptidase family M23 ACH33_03360 PF04055 Radical SAM superfamily ACH33_03360 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ACH33_03385 PF01934 Protein of unknown function DUF86 ACH33_03395 PF01636 Phosphotransferase enzyme family ACH33_03400 PF13344 Haloacid dehalogenase-like hydrolase ACH33_03405 PF04608 Phosphatidylglycerophosphatase A ACH33_03415 PF00293 NUDIX domain ACH33_03420 PF07690 Major Facilitator Superfamily ACH33_03425 PF03466 LysR substrate binding domain ACH33_03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_03430 PF01106 NifU-like domain ACH33_03435 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_03440 PF01053 Cys/Met metabolism PLP-dependent enzyme ACH33_03445 PF07315 Protein of unknown function (DUF1462) ACH33_03450 PF07293 Protein of unknown function (DUF1450) ACH33_03460 PF04055 Radical SAM superfamily ACH33_03465 PF01521 Iron-sulphur cluster biosynthesis ACH33_03490 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_03520 PF02681 Divergent PAP2 family ACH33_03525 PF02789 Cytosol aminopeptidase family, N-terminal domain ACH33_03525 PF00883 Cytosol aminopeptidase family, catalytic domain ACH33_03530 PF00156 Phosphoribosyl transferase domain ACH33_03535 PF00860 Permease family ACH33_03540 PF00205 Thiamine pyrophosphate enzyme, central domain ACH33_03540 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACH33_03540 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACH33_03545 PF01842 ACT domain ACH33_03545 PF10369 Small subunit of acetolactate synthase ACH33_03550 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ACH33_03550 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ACH33_03555 PF00682 HMGL-like ACH33_03555 PF08502 LeuA allosteric (dimerisation) domain ACH33_03560 PF00180 Isocitrate/isopropylmalate dehydrogenase ACH33_03585 PF04070 Domain of unknown function (DUF378) ACH33_03595 PF05343 M42 glutamyl aminopeptidase ACH33_03600 PF14098 Small, acid-soluble spore protein I ACH33_03605 PF02080 TrkA-C domain ACH33_03605 PF02254 TrkA-N domain ACH33_03610 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACH33_03610 PF00588 SpoU rRNA Methylase family ACH33_03620 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ACH33_03620 PF01409 tRNA synthetases class II core domain (F) ACH33_03625 PF03147 Ferredoxin-fold anticodon binding domain ACH33_03625 PF01588 Putative tRNA binding domain ACH33_03625 PF03484 tRNA synthetase B5 domain ACH33_03625 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ACH33_03625 PF03483 B3/4 domain ACH33_03630 PF05164 Cell division protein ZapA ACH33_03635 PF02674 Colicin V production protein ACH33_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_03640 PF03466 LysR substrate binding domain ACH33_03645 PF13520 Amino acid permease ACH33_03650 PF01713 Smr domain ACH33_03650 PF00488 MutS domain V ACH33_03655 PF03994 Domain of Unknown Function (DUF350) ACH33_03660 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACH33_03660 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACH33_03660 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACH33_03670 PF01810 LysE type translocator ACH33_03675 PF00155 Aminotransferase class I and II ACH33_03675 PF00392 Bacterial regulatory proteins, gntR family ACH33_03710 PF00534 Glycosyl transferases group 1 ACH33_03710 PF13439 Glycosyltransferase Family 4 ACH33_03715 PF03023 Lipid II flippase MurJ ACH33_03720 PF16363 GDP-mannose 4,6 dehydratase ACH33_03730 PF00171 Aldehyde dehydrogenase family ACH33_03735 PF01619 Proline dehydrogenase ACH33_03740 PF00474 Sodium:solute symporter family ACH33_03745 PF06150 ChaB ACH33_03760 PF00115 Cytochrome C and Quinol oxidase polypeptide I ACH33_03765 PF08359 YsiA-like protein, C-terminal region ACH33_03765 PF00440 Bacterial regulatory proteins, tetR family ACH33_03770 PF00378 Enoyl-CoA hydratase/isomerase ACH33_03775 PF01012 Electron transfer flavoprotein domain ACH33_03780 PF00766 Electron transfer flavoprotein FAD-binding domain ACH33_03780 PF01012 Electron transfer flavoprotein domain ACH33_03785 PF00085 Thioredoxin ACH33_03790 PF01541 GIY-YIG catalytic domain ACH33_03790 PF02151 UvrB/uvrC motif ACH33_03790 PF08459 UvrC Helix-hairpin-helix N-terminal ACH33_03795 PF13840 ACT domain ACH33_03795 PF00696 Amino acid kinase family ACH33_03800 PF02632 BioY family ACH33_03805 PF00561 alpha/beta hydrolase fold ACH33_03810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ACH33_03815 PF00890 FAD binding domain ACH33_03815 PF02910 Fumarate reductase flavoprotein C-term ACH33_03820 PF13183 4Fe-4S dicluster domain ACH33_03820 PF13085 2Fe-2S iron-sulfur cluster binding domain ACH33_03825 PF06968 Biotin and Thiamin Synthesis associated domain ACH33_03825 PF04055 Radical SAM superfamily ACH33_03840 PF00196 Bacterial regulatory proteins, luxR family ACH33_03845 PF04545 Sigma-70, region 4 ACH33_03845 PF04539 Sigma-70 region 3 ACH33_03845 PF04542 Sigma-70 region 2 ACH33_03850 PF13581 Histidine kinase-like ATPase domain ACH33_03855 PF02954 Bacterial regulatory protein, Fis family ACH33_03855 PF01590 GAF domain ACH33_03855 PF00158 Sigma-54 interaction domain ACH33_03860 PF03099 Biotin/lipoate A/B protein ligase family ACH33_03865 PF00676 Dehydrogenase E1 component ACH33_03870 PF02779 Transketolase, pyrimidine binding domain ACH33_03870 PF02780 Transketolase, C-terminal domain ACH33_03875 PF00364 Biotin-requiring enzyme ACH33_03875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACH33_03875 PF02817 e3 binding domain ACH33_03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACH33_03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_03885 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ACH33_03885 PF04055 Radical SAM superfamily ACH33_03890 PF00107 Zinc-binding dehydrogenase ACH33_03890 PF08240 Alcohol dehydrogenase GroES-like domain ACH33_03895 PF00196 Bacterial regulatory proteins, luxR family ACH33_03900 PF01177 Asp/Glu/Hydantoin racemase ACH33_03905 PF10646 Sporulation and spore germination ACH33_03910 PF03725 3' exoribonuclease family, domain 2 ACH33_03910 PF01138 3' exoribonuclease family, domain 1 ACH33_03915 PF01725 Ham1 family ACH33_03930 PF05697 Bacterial trigger factor protein (TF) ACH33_03930 PF05698 Bacterial trigger factor protein (TF) C-terminus ACH33_03930 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ACH33_03935 PF00574 Clp protease ACH33_03940 PF06689 ClpX C4-type zinc finger ACH33_03940 PF10431 C-terminal, D2-small domain, of ClpB protein ACH33_03940 PF07724 AAA domain (Cdc48 subfamily) ACH33_03945 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_03945 PF05362 Lon protease (S16) C-terminal proteolytic domain ACH33_03950 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_03950 PF02190 ATP-dependent protease La (LON) substrate-binding domain ACH33_03950 PF05362 Lon protease (S16) C-terminal proteolytic domain ACH33_03955 PF01926 50S ribosome-binding GTPase ACH33_03960 PF00892 EamA-like transporter family ACH33_03965 PF02541 Ppx/GppA phosphatase family ACH33_03970 PF17941 Polyphosphate kinase C-terminal domain 1 ACH33_03970 PF13090 Polyphosphate kinase C-terminal domain 2 ACH33_03970 PF13089 Polyphosphate kinase N-terminal domain ACH33_03970 PF02503 Polyphosphate kinase middle domain ACH33_03975 PF01488 Shikimate / quinate 5-dehydrogenase ACH33_03975 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ACH33_03975 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ACH33_03980 PF01578 Cytochrome C assembly protein ACH33_03985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ACH33_03985 PF03900 Porphobilinogen deaminase, C-terminal domain ACH33_03995 PF00490 Delta-aminolevulinic acid dehydratase ACH33_04000 PF00202 Aminotransferase class-III ACH33_04005 PF01476 LysM domain ACH33_04005 PF01476 LysM domain ACH33_04050 PF00005 ABC transporter ACH33_04055 PF00133 tRNA synthetases class I (I, L, M and V) ACH33_04055 PF08264 Anticodon-binding domain of tRNA ACH33_04055 PF10458 Valyl tRNA synthetase tRNA binding arm ACH33_04060 PF08245 Mur ligase middle domain ACH33_04060 PF02875 Mur ligase family, glutamate ligase domain ACH33_04065 PF01225 Mur ligase family, catalytic domain ACH33_04065 PF02875 Mur ligase family, glutamate ligase domain ACH33_04065 PF08245 Mur ligase middle domain ACH33_04070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_04070 PF00672 HAMP domain ACH33_04070 PF02743 Cache domain ACH33_04110 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ACH33_04110 PF00437 Type II/IV secretion system protein ACH33_04115 PF00437 Type II/IV secretion system protein ACH33_04120 PF00482 Type II secretion system (T2SS), protein F ACH33_04125 PF08334 Type II secretion system (T2SS), protein G ACH33_04125 PF07963 Prokaryotic N-terminal methylation motif ACH33_04130 PF01478 Type IV leader peptidase family ACH33_04130 PF06750 Bacterial Peptidase A24 N-terminal domain ACH33_04155 PF02545 Maf-like protein ACH33_04160 PF04002 RadC-like JAB domain ACH33_04170 PF04085 rod shape-determining protein MreC ACH33_04180 PF03775 Septum formation inhibitor MinC, C-terminal domain ACH33_04185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ACH33_04190 PF01098 Cell cycle protein ACH33_04200 PF02163 Peptidase family M50 ACH33_04205 PF00575 S1 RNA binding domain ACH33_04205 PF10150 Ribonuclease E/G family ACH33_04210 PF00829 Ribosomal prokaryotic L21 protein ACH33_04215 PF04327 Cysteine protease Prp ACH33_04220 PF01016 Ribosomal L27 protein ACH33_04225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACH33_04225 PF00205 Thiamine pyrophosphate enzyme, central domain ACH33_04225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACH33_04230 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ACH33_04230 PF14682 Sporulation initiation phospho-transferase B, C-terminal ACH33_04235 PF09269 Domain of unknown function (DUF1967) ACH33_04235 PF01018 GTP1/OBG ACH33_04235 PF01926 50S ribosome-binding GTPase ACH33_04240 PF01842 ACT domain ACH33_04245 PF01842 ACT domain ACH33_04245 PF03447 Homoserine dehydrogenase, NAD binding domain ACH33_04245 PF00742 Homoserine dehydrogenase ACH33_04250 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_04255 PF00288 GHMP kinases N terminal domain ACH33_04255 PF08544 GHMP kinases C terminal ACH33_04260 PF01842 ACT domain ACH33_04260 PF00800 Prephenate dehydratase ACH33_04265 PF01063 Amino-transferase class IV ACH33_04270 PF01709 Transcriptional regulator ACH33_04280 PF01476 LysM domain ACH33_04290 PF01330 RuvA N terminal domain ACH33_04290 PF07499 RuvA, C-terminal domain ACH33_04295 PF05491 RuvB C-terminal winged helix domain ACH33_04295 PF17864 RuvB AAA lid domain ACH33_04295 PF05496 Holliday junction DNA helicase RuvB P-loop domain ACH33_04300 PF11146 Protein of unknown function (DUF2905) ACH33_04310 PF01047 MarR family ACH33_04315 PF03099 Biotin/lipoate A/B protein ligase family ACH33_04320 PF08486 Stage II sporulation protein ACH33_04320 PF04122 Putative cell wall binding repeat 2 ACH33_04325 PF02547 Queuosine biosynthesis protein ACH33_04330 PF01702 Queuine tRNA-ribosyltransferase ACH33_04335 PF02699 Preprotein translocase subunit ACH33_04345 PF01544 CorA-like Mg2+ transporter protein ACH33_04350 PF14667 Polysaccharide biosynthesis C-terminal domain ACH33_04350 PF01943 Polysaccharide biosynthesis protein ACH33_04380 PF01368 DHH family ACH33_04380 PF02272 DHHA1 domain ACH33_04380 PF17768 RecJ OB domain ACH33_04380 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ACH33_04385 PF00156 Phosphoribosyl transferase domain ACH33_04390 PF04607 Region found in RelA / SpoT proteins ACH33_04390 PF13291 ACT domain ACH33_04390 PF02824 TGS domain ACH33_04395 PF02580 D-Tyr-tRNA(Tyr) deacylase ACH33_04400 PF04055 Radical SAM superfamily ACH33_04410 PF03129 Anticodon binding domain ACH33_04410 PF13393 Histidyl-tRNA synthetase ACH33_04415 PF01336 OB-fold nucleic acid binding domain ACH33_04415 PF02938 GAD domain ACH33_04415 PF00152 tRNA synthetases class II (D, K and N) ACH33_04425 PF00899 ThiF family ACH33_04430 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_04430 PF16193 AAA C-terminal domain ACH33_04430 PF12002 MgsA AAA+ ATPase C terminal ACH33_04435 PF02082 Transcriptional regulator ACH33_04440 PF00266 Aminotransferase class-V ACH33_04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_04460 PF02743 Cache domain ACH33_04460 PF00672 HAMP domain ACH33_04475 PF01594 AI-2E family transporter ACH33_04480 PF02272 DHHA1 domain ACH33_04480 PF01411 tRNA synthetases class II (A) ACH33_04480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACH33_04485 PF06135 IreB regulatory phosphoprotein ACH33_04490 PF03652 Holliday junction resolvase ACH33_04495 PF06949 Protein of unknown function (DUF1292) ACH33_04515 PF02618 YceG-like family ACH33_04535 PF00485 Phosphoribulokinase / Uridine kinase family ACH33_04540 PF00905 Penicillin binding protein transpeptidase domain ACH33_04540 PF03717 Penicillin-binding Protein dimerisation domain ACH33_04550 PF13411 MerR HTH family regulatory protein ACH33_04595 PF00109 Beta-ketoacyl synthase, N-terminal domain ACH33_04595 PF02801 Beta-ketoacyl synthase, C-terminal domain ACH33_04600 PF00005 ABC transporter ACH33_04620 PF00550 Phosphopantetheine attachment site ACH33_04630 PF00171 Aldehyde dehydrogenase family ACH33_04635 PF00205 Thiamine pyrophosphate enzyme, central domain ACH33_04635 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACH33_04635 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACH33_04655 PF00501 AMP-binding enzyme ACH33_04655 PF13193 AMP-binding enzyme C-terminal domain ACH33_04665 PF00171 Aldehyde dehydrogenase family ACH33_04670 PF00180 Isocitrate/isopropylmalate dehydrogenase ACH33_04680 PF00355 Rieske [2Fe-2S] domain ACH33_04680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ACH33_04690 PF00474 Sodium:solute symporter family ACH33_04705 PF07075 Protein of unknown function (DUF1343) ACH33_04710 PF05816 Toxic anion resistance protein (TelA) ACH33_04715 PF02086 D12 class N6 adenine-specific DNA methyltransferase ACH33_04720 PF01274 Malate synthase ACH33_04725 PF00463 Isocitrate lyase family ACH33_04730 PF03788 LrgA family ACH33_04735 PF04172 LrgB-like family ACH33_04745 PF01032 FecCD transport family ACH33_04750 PF01032 FecCD transport family ACH33_04755 PF00005 ABC transporter ACH33_04760 PF01497 Periplasmic binding protein ACH33_04765 PF00403 Heavy-metal-associated domain ACH33_04770 PF01022 Bacterial regulatory protein, arsR family ACH33_04775 PF12323 Helix-turn-helix domain ACH33_04775 PF01385 Probable transposase ACH33_04775 PF07282 Putative transposase DNA-binding domain ACH33_04785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_04785 PF00512 His Kinase A (phospho-acceptor) domain ACH33_04785 PF00989 PAS fold ACH33_04790 PF00072 Response regulator receiver domain ACH33_04790 PF02954 Bacterial regulatory protein, Fis family ACH33_04790 PF00158 Sigma-54 interaction domain ACH33_04795 PF00491 Arginase family ACH33_04800 PF03616 Sodium/glutamate symporter ACH33_04815 PF01695 IstB-like ATP binding protein ACH33_04820 PF02796 Helix-turn-helix domain of resolvase ACH33_04820 PF00665 Integrase core domain ACH33_04830 PF13408 Recombinase zinc beta ribbon domain ACH33_04830 PF07508 Recombinase ACH33_04830 PF00239 Resolvase, N terminal domain ACH33_04835 PF07508 Recombinase ACH33_04835 PF00239 Resolvase, N terminal domain ACH33_04865 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_04910 PF01548 Transposase ACH33_04910 PF02371 Transposase IS116/IS110/IS902 family ACH33_04940 PF06725 3D domain ACH33_04940 PF01476 LysM domain ACH33_04945 PF01522 Polysaccharide deacetylase ACH33_04950 PF01654 Cytochrome bd terminal oxidase subunit I ACH33_04955 PF02322 Cytochrome bd terminal oxidase subunit II ACH33_04960 PF13193 AMP-binding enzyme C-terminal domain ACH33_04960 PF00501 AMP-binding enzyme ACH33_04975 PF10415 Fumarase C C-terminus ACH33_04975 PF00206 Lyase ACH33_04980 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_04995 PF01208 Uroporphyrinogen decarboxylase (URO-D) ACH33_05005 PF04029 2-phosphosulpholactate phosphatase ACH33_05010 PF10942 Protein of unknown function (DUF2619) ACH33_05015 PF00246 Zinc carboxypeptidase ACH33_05015 PF01476 LysM domain ACH33_05020 PF01925 Sulfite exporter TauE/SafE ACH33_05025 PF03600 Citrate transporter ACH33_05035 PF00881 Nitroreductase family ACH33_05040 PF01546 Peptidase family M20/M25/M40 ACH33_05050 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_05055 PF00005 ABC transporter ACH33_05070 PF10502 Signal peptidase, peptidase S26 ACH33_05075 PF00781 Diacylglycerol kinase catalytic domain ACH33_05080 PF09335 SNARE associated Golgi protein ACH33_05085 PF08386 TAP-like protein ACH33_05085 PF00561 alpha/beta hydrolase fold ACH33_05090 PF00676 Dehydrogenase E1 component ACH33_05095 PF02780 Transketolase, C-terminal domain ACH33_05095 PF02779 Transketolase, pyrimidine binding domain ACH33_05100 PF00364 Biotin-requiring enzyme ACH33_05100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACH33_05100 PF02817 e3 binding domain ACH33_05105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACH33_05105 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_05110 PF11084 Protein of unknown function (DUF2621) ACH33_05120 PF02554 Carbon starvation protein CstA ACH33_05120 PF13722 5TM C-terminal transporter carbon starvation CstA ACH33_05125 PF02743 Cache domain ACH33_05125 PF00672 HAMP domain ACH33_05125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_05130 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACH33_05135 PF04397 LytTr DNA-binding domain ACH33_05135 PF00072 Response regulator receiver domain ACH33_05140 PF13492 GAF domain ACH33_05140 PF07694 5TMR of 5TMR-LYT ACH33_05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_05140 PF06580 Histidine kinase ACH33_05145 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ACH33_05145 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACH33_05145 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACH33_05160 PF01926 50S ribosome-binding GTPase ACH33_05165 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ACH33_05165 PF01488 Shikimate / quinate 5-dehydrogenase ACH33_05165 PF08501 Shikimate dehydrogenase substrate binding domain ACH33_05170 PF01985 CRS1 / YhbY (CRM) domain ACH33_05175 PF01467 Cytidylyltransferase-like ACH33_05180 PF01966 HD domain ACH33_05190 PF13649 Methyltransferase domain ACH33_05200 PF03807 NADP oxidoreductase coenzyme F420-dependent ACH33_05200 PF14748 Pyrroline-5-carboxylate reductase dimerisation ACH33_05205 PF10752 Protein of unknown function (DUF2533) ACH33_05210 PF10531 SLBB domain ACH33_05215 PF01053 Cys/Met metabolism PLP-dependent enzyme ACH33_05220 PF14437 MafB19-like deaminase ACH33_05235 PF03772 Competence protein ACH33_05235 PF13567 Domain of unknown function (DUF4131) ACH33_05235 PF00753 Metallo-beta-lactamase superfamily ACH33_05240 PF04542 Sigma-70 region 2 ACH33_05240 PF08281 Sigma-70, region 4 ACH33_05250 PF06144 DNA polymerase III, delta subunit ACH33_05255 PF01649 Ribosomal protein S20 ACH33_05270 PF07454 Stage II sporulation protein P (SpoIIP) ACH33_05280 PF00557 Metallopeptidase family M24 ACH33_05280 PF01321 Creatinase/Prolidase N-terminal domain ACH33_05285 PF03144 Elongation factor Tu domain 2 ACH33_05285 PF00009 Elongation factor Tu GTP binding domain ACH33_05285 PF00679 Elongation factor G C-terminus ACH33_05285 PF06421 GTP-binding protein LepA C-terminus ACH33_05290 PF04055 Radical SAM superfamily ACH33_05290 PF06969 HemN C-terminal domain ACH33_05295 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ACH33_05295 PF01628 HrcA protein C terminal domain ACH33_05300 PF00118 TCP-1/cpn60 chaperonin family ACH33_05305 PF01025 GrpE ACH33_05310 PF00012 Hsp70 protein ACH33_05315 PF00684 DnaJ central domain ACH33_05315 PF00226 DnaJ domain ACH33_05315 PF01556 DnaJ C terminal domain ACH33_05325 PF04452 RNA methyltransferase ACH33_05330 PF00919 Uncharacterized protein family UPF0004 ACH33_05330 PF04055 Radical SAM superfamily ACH33_05330 PF01938 TRAM domain ACH33_05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_05335 PF00989 PAS fold ACH33_05335 PF17203 Single cache domain 3 ACH33_05335 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ACH33_05340 PF00072 Response regulator receiver domain ACH33_05345 PF00375 Sodium:dicarboxylate symporter family ACH33_05350 PF03480 Bacterial extracellular solute-binding protein, family 7 ACH33_05355 PF00293 NUDIX domain ACH33_05360 PF01791 DeoC/LacD family aldolase ACH33_05365 PF02690 Na+/Pi-cotransporter ACH33_05380 PF01189 16S rRNA methyltransferase RsmB/F ACH33_05380 PF17126 RsmF rRNA methyltransferase first C-terminal domain ACH33_05380 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ACH33_05400 PF08281 Sigma-70, region 4 ACH33_05400 PF04542 Sigma-70 region 2 ACH33_05420 PF07690 Major Facilitator Superfamily ACH33_05435 PF04286 Protein of unknown function (DUF445) ACH33_05440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_05445 PF00072 Response regulator receiver domain ACH33_05445 PF08664 YcbB domain ACH33_05450 PF01820 D-ala D-ala ligase N-terminus ACH33_05450 PF07478 D-ala D-ala ligase C-terminus ACH33_05455 PF08245 Mur ligase middle domain ACH33_05455 PF02875 Mur ligase family, glutamate ligase domain ACH33_05455 PF01225 Mur ligase family, catalytic domain ACH33_05460 PF01165 Ribosomal protein S21 ACH33_05465 PF09424 Yqey-like protein ACH33_05470 PF07873 YabP family ACH33_05475 PF06898 Putative stage IV sporulation protein YqfD ACH33_05480 PF02562 PhoH-like protein ACH33_05485 PF07698 7TM receptor with intracellular HD hydrolase ACH33_05485 PF01966 HD domain ACH33_05485 PF07697 7TM-HD extracellular ACH33_05490 PF02130 Uncharacterized protein family UPF0054 ACH33_05500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACH33_05505 PF07650 KH domain ACH33_05505 PF01926 50S ribosome-binding GTPase ACH33_05510 PF02565 Recombination protein O C terminal ACH33_05510 PF11967 Recombination protein O N terminal ACH33_05515 PF02091 Glycyl-tRNA synthetase alpha subunit ACH33_05520 PF02092 Glycyl-tRNA synthetase beta subunit ACH33_05520 PF05746 DALR anticodon binding domain ACH33_05525 PF08279 HTH domain ACH33_05525 PF00571 CBS domain ACH33_05530 PF03618 Kinase/pyrophosphorylase ACH33_05535 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ACH33_05540 PF10410 DnaB-helicase binding domain of primase ACH33_05540 PF08275 DNA primase catalytic core, N-terminal domain ACH33_05540 PF01807 CHC2 zinc finger ACH33_05545 PF04539 Sigma-70 region 3 ACH33_05545 PF04542 Sigma-70 region 2 ACH33_05545 PF04545 Sigma-70, region 4 ACH33_05545 PF03979 Sigma-70 factor, region 1.1 ACH33_05545 PF00140 Sigma-70 factor, region 1.2 ACH33_05555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACH33_05555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACH33_05555 PF02770 Acyl-CoA dehydrogenase, middle domain ACH33_05560 PF13193 AMP-binding enzyme C-terminal domain ACH33_05560 PF00501 AMP-binding enzyme ACH33_05575 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ACH33_05580 PF01784 NIF3 (NGG1p interacting factor 3) ACH33_05600 PF09587 Bacterial capsule synthesis protein PGA_cap ACH33_05610 PF01523 Putative modulator of DNA gyrase ACH33_05615 PF01523 Putative modulator of DNA gyrase ACH33_05620 PF01541 GIY-YIG catalytic domain ACH33_05665 PF01520 N-acetylmuramoyl-L-alanine amidase ACH33_05670 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain ACH33_05670 PF01522 Polysaccharide deacetylase ACH33_05680 PF00939 Sodium:sulfate symporter transmembrane region ACH33_05685 PF00797 N-acetyltransferase ACH33_05690 PF00877 NlpC/P60 family ACH33_05705 PF00296 Luciferase-like monooxygenase ACH33_05710 PF07690 Major Facilitator Superfamily ACH33_05715 PF11208 Protein of unknown function (DUF2992) ACH33_05725 PF03744 6-carboxyhexanoate--CoA ligase ACH33_05730 PF00155 Aminotransferase class I and II ACH33_05735 PF02667 Short chain fatty acid transporter ACH33_05740 PF12833 Helix-turn-helix domain ACH33_05740 PF02311 AraC-like ligand binding domain ACH33_05745 PF00491 Arginase family ACH33_05750 PF17391 Urocanase N-terminal domain ACH33_05750 PF17392 Urocanase C-terminal domain ACH33_05750 PF01175 Urocanase Rossmann-like domain ACH33_05755 PF01979 Amidohydrolase family ACH33_05765 PF07729 FCD domain ACH33_05765 PF00392 Bacterial regulatory proteins, gntR family ACH33_05775 PF00795 Carbon-nitrogen hydrolase ACH33_05780 PF07690 Major Facilitator Superfamily ACH33_05800 PF02557 D-alanyl-D-alanine carboxypeptidase ACH33_05805 PF00795 Carbon-nitrogen hydrolase ACH33_05810 PF00158 Sigma-54 interaction domain ACH33_05815 PF00324 Amino acid permease ACH33_05820 PF00850 Histone deacetylase domain ACH33_05830 PF03698 Uncharacterised protein family (UPF0180) ACH33_05835 PF07408 Protein of unknown function (DUF1507) ACH33_05845 PF00210 Ferritin-like domain ACH33_05855 PF00186 Dihydrofolate reductase ACH33_05870 PF00578 AhpC/TSA family ACH33_05875 PF03009 Glycerophosphoryl diester phosphodiesterase family ACH33_05885 PF01638 HxlR-like helix-turn-helix ACH33_05890 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_05900 PF00350 Dynamin family ACH33_05915 PF05525 Branched-chain amino acid transport protein ACH33_05925 PF00082 Subtilase family ACH33_05930 PF13193 AMP-binding enzyme C-terminal domain ACH33_05930 PF00501 AMP-binding enzyme ACH33_05935 PF08543 Phosphomethylpyrimidine kinase ACH33_05950 PF08241 Methyltransferase domain ACH33_05960 PF03061 Thioesterase superfamily ACH33_05965 PF03649 Uncharacterised protein family (UPF0014) ACH33_05970 PF00005 ABC transporter ACH33_05975 PF01694 Rhomboid family ACH33_05980 PF05681 Fumarate hydratase (Fumerase) ACH33_05980 PF05683 Fumarase C-terminus ACH33_05995 PF05343 M42 glutamyl aminopeptidase ACH33_06010 PF01699 Sodium/calcium exchanger protein ACH33_06015 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACH33_06015 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACH33_06015 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACH33_06040 PF00884 Sulfatase ACH33_06040 PF16347 Domain of unknown function (DUF4976) ACH33_06045 PF00535 Glycosyl transferase family 2 ACH33_06050 PF01471 Putative peptidoglycan binding domain ACH33_06050 PF07486 Cell Wall Hydrolase ACH33_06055 PF01022 Bacterial regulatory protein, arsR family ACH33_06060 PF03780 Asp23 family, cell envelope-related function ACH33_06075 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_06085 PF06133 Control of competence regulator ComK, YlbF/YmcA ACH33_06090 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ACH33_06095 PF00582 Universal stress protein family ACH33_06110 PF00437 Type II/IV secretion system protein ACH33_06115 PF00482 Type II secretion system (T2SS), protein F ACH33_06120 PF07963 Prokaryotic N-terminal methylation motif ACH33_06120 PF08334 Type II secretion system (T2SS), protein G ACH33_06125 PF07963 Prokaryotic N-terminal methylation motif ACH33_06145 PF01202 Shikimate kinase ACH33_06155 PF11079 Bacterial protein YqhG of unknown function ACH33_06160 PF00176 SNF2 family N-terminal domain ACH33_06160 PF00271 Helicase conserved C-terminal domain ACH33_06165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACH33_06165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ACH33_06170 PF07885 Ion channel ACH33_06185 PF08669 Glycine cleavage T-protein C-terminal barrel domain ACH33_06185 PF01571 Aminomethyltransferase folate-binding domain ACH33_06190 PF01597 Glycine cleavage H-protein ACH33_06195 PF02347 Glycine cleavage system P-protein ACH33_06200 PF02347 Glycine cleavage system P-protein ACH33_06205 PF01258 Prokaryotic dksA/traR C4-type zinc finger ACH33_06215 PF03099 Biotin/lipoate A/B protein ligase family ACH33_06220 PF03477 ATP cone domain ACH33_06220 PF00317 Ribonucleotide reductase, all-alpha domain ACH33_06220 PF02867 Ribonucleotide reductase, barrel domain ACH33_06225 PF02702 Osmosensitive K+ channel His kinase sensor domain ACH33_06230 PF02669 K+-transporting ATPase, c chain ACH33_06240 PF03814 Potassium-transporting ATPase A subunit ACH33_06245 PF10057 Uncharacterized conserved protein (DUF2294) ACH33_06250 PF02954 Bacterial regulatory protein, Fis family ACH33_06250 PF00158 Sigma-54 interaction domain ACH33_06250 PF00989 PAS fold ACH33_06255 PF00676 Dehydrogenase E1 component ACH33_06260 PF02779 Transketolase, pyrimidine binding domain ACH33_06260 PF02780 Transketolase, C-terminal domain ACH33_06265 PF00364 Biotin-requiring enzyme ACH33_06265 PF02817 e3 binding domain ACH33_06265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACH33_06270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACH33_06270 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_06275 PF04461 Protein of unknown function (DUF520) ACH33_06285 PF02742 Iron dependent repressor, metal binding and dimerisation domain ACH33_06285 PF01325 Iron dependent repressor, N-terminal DNA binding domain ACH33_06290 PF01734 Patatin-like phospholipase ACH33_06300 PF07136 Protein of unknown function (DUF1385) ACH33_06305 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ACH33_06310 PF01220 Dehydroquinase class II ACH33_06315 PF01321 Creatinase/Prolidase N-terminal domain ACH33_06315 PF00557 Metallopeptidase family M24 ACH33_06320 PF09285 Elongation factor P, C-terminal ACH33_06320 PF01132 Elongation factor P (EF-P) OB domain ACH33_06320 PF08207 Elongation factor P (EF-P) KOW-like domain ACH33_06325 PF07690 Major Facilitator Superfamily ACH33_06330 PF00561 alpha/beta hydrolase fold ACH33_06345 PF06686 Stage III sporulation protein AC/AD protein family ACH33_06350 PF06686 Stage III sporulation protein AC/AD protein family ACH33_06355 PF09546 Stage III sporulation protein AE (spore_III_AE) ACH33_06360 PF09581 Stage III sporulation protein AF (Spore_III_AF) ACH33_06370 PF12685 SpoIIIAH-like protein ACH33_06375 PF00364 Biotin-requiring enzyme ACH33_06380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACH33_06380 PF00289 Biotin carboxylase, N-terminal domain ACH33_06380 PF02785 Biotin carboxylase C-terminal domain ACH33_06385 PF03780 Asp23 family, cell envelope-related function ACH33_06400 PF01029 NusB family ACH33_06405 PF00814 Glycoprotease family ACH33_06410 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ACH33_06410 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ACH33_06415 PF13742 OB-fold nucleic acid binding domain ACH33_06415 PF02601 Exonuclease VII, large subunit ACH33_06420 PF02609 Exonuclease VII small subunit ACH33_06425 PF00348 Polyprenyl synthetase ACH33_06430 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ACH33_06430 PF02780 Transketolase, C-terminal domain ACH33_06430 PF02779 Transketolase, pyrimidine binding domain ACH33_06435 PF01728 FtsJ-like methyltransferase ACH33_06435 PF01479 S4 domain ACH33_06440 PF01513 ATP-NAD kinase ACH33_06445 PF01316 Arginine repressor, DNA binding domain ACH33_06445 PF02863 Arginine repressor, C-terminal domain ACH33_06450 PF13476 AAA domain ACH33_06455 PF17820 PDZ domain ACH33_06455 PF05580 SpoIVB peptidase S55 ACH33_06460 PF08769 Sporulation initiation factor Spo0A C terminal ACH33_06460 PF00072 Response regulator receiver domain ACH33_06470 PF02811 PHP domain ACH33_06475 PF13673 Acetyltransferase (GNAT) domain ACH33_06480 PF04608 Phosphatidylglycerophosphatase A ACH33_06485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACH33_06485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACH33_06530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ACH33_06530 PF01276 Orn/Lys/Arg decarboxylase, major domain ACH33_06535 PF03060 Nitronate monooxygenase ACH33_06540 PF06335 Protein of unknown function (DUF1054) ACH33_06550 PF00883 Cytosol aminopeptidase family, catalytic domain ACH33_06550 PF02789 Cytosol aminopeptidase family, N-terminal domain ACH33_06560 PF02675 S-adenosylmethionine decarboxylase ACH33_06575 PF00158 Sigma-54 interaction domain ACH33_06575 PF02954 Bacterial regulatory protein, Fis family ACH33_06575 PF00989 PAS fold ACH33_06590 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ACH33_06595 PF02562 PhoH-like protein ACH33_06595 PF13638 PIN domain ACH33_06600 PF00753 Metallo-beta-lactamase superfamily ACH33_06625 PF03960 ArsC family ACH33_06630 PF01367 5'-3' exonuclease, C-terminal SAM fold ACH33_06630 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACH33_06635 PF00378 Enoyl-CoA hydratase/isomerase ACH33_06645 PF02785 Biotin carboxylase C-terminal domain ACH33_06645 PF00289 Biotin carboxylase, N-terminal domain ACH33_06645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACH33_06650 PF00364 Biotin-requiring enzyme ACH33_06660 PF01039 Carboxyl transferase domain ACH33_06665 PF00440 Bacterial regulatory proteins, tetR family ACH33_06665 PF08359 YsiA-like protein, C-terminal region ACH33_06670 PF10079 Bacillithiol biosynthesis BshC ACH33_06675 PF05221 S-adenosyl-L-homocysteine hydrolase ACH33_06675 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACH33_06685 PF01795 MraW methylase family ACH33_06700 PF03717 Penicillin-binding Protein dimerisation domain ACH33_06700 PF00905 Penicillin binding protein transpeptidase domain ACH33_06700 PF03793 PASTA domain ACH33_06705 PF08245 Mur ligase middle domain ACH33_06705 PF01225 Mur ligase family, catalytic domain ACH33_06705 PF02875 Mur ligase family, glutamate ligase domain ACH33_06710 PF00953 Glycosyl transferase family 4 ACH33_06715 PF08245 Mur ligase middle domain ACH33_06715 PF02875 Mur ligase family, glutamate ligase domain ACH33_06720 PF01098 Cell cycle protein ACH33_06725 PF04101 Glycosyltransferase family 28 C-terminal domain ACH33_06725 PF03033 Glycosyltransferase family 28 N-terminal domain ACH33_06730 PF01565 FAD binding domain ACH33_06730 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ACH33_06735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACH33_06740 PF08478 POTRA domain, FtsQ-type ACH33_06740 PF03799 Cell division protein FtsQ ACH33_06745 PF05949 Bacterial protein of unknown function (DUF881) ACH33_06755 PF06947 Protein of unknown function (DUF1290) ACH33_06760 PF02491 SHS2 domain inserted in FTSA ACH33_06765 PF12327 FtsZ family, C-terminal domain ACH33_06765 PF00091 Tubulin/FtsZ family, GTPase domain ACH33_06770 PF03419 Sporulation factor SpoIIGA ACH33_06775 PF04542 Sigma-70 region 2 ACH33_06775 PF04545 Sigma-70, region 4 ACH33_06780 PF04545 Sigma-70, region 4 ACH33_06780 PF04539 Sigma-70 region 3 ACH33_06780 PF04542 Sigma-70 region 2 ACH33_06785 PF00497 Bacterial extracellular solute-binding proteins, family 3 ACH33_06790 PF05239 PRC-barrel domain ACH33_06800 PF01168 Alanine racemase, N-terminal domain ACH33_06805 PF04472 Cell division protein SepF ACH33_06810 PF02325 YGGT family ACH33_06815 PF01479 S4 domain ACH33_06815 PF17774 Putative RNA-binding domain in YlmH ACH33_06820 PF05103 DivIVA protein ACH33_06825 PF08264 Anticodon-binding domain of tRNA ACH33_06825 PF00133 tRNA synthetases class I (I, L, M and V) ACH33_06830 PF01252 Signal peptidase (SPase) II ACH33_06835 PF01479 S4 domain ACH33_06835 PF00849 RNA pseudouridylate synthase ACH33_06840 PF00156 Phosphoribosyl transferase domain ACH33_06845 PF00860 Permease family ACH33_06850 PF01979 Amidohydrolase family ACH33_06855 PF00117 Glutamine amidotransferase class-I ACH33_06855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ACH33_06860 PF02142 MGS-like domain ACH33_06860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACH33_06860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACH33_06865 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ACH33_06865 PF00970 Oxidoreductase FAD-binding domain ACH33_06870 PF01180 Dihydroorotate dehydrogenase ACH33_06875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ACH33_06880 PF00156 Phosphoribosyl transferase domain ACH33_06885 PF01943 Polysaccharide biosynthesis protein ACH33_06885 PF14667 Polysaccharide biosynthesis C-terminal domain ACH33_06895 PF00690 Cation transporter/ATPase, N-terminus ACH33_06895 PF00689 Cation transporting ATPase, C-terminus ACH33_06905 PF03755 YicC-like family, N-terminal region ACH33_06905 PF08340 Domain of unknown function (DUF1732) ACH33_06910 PF04025 Domain of unknown function (DUF370) ACH33_06915 PF00625 Guanylate kinase ACH33_06920 PF01192 RNA polymerase Rpb6 ACH33_06925 PF02441 Flavoprotein ACH33_06925 PF04127 DNA / pantothenate metabolism flavoprotein ACH33_06930 PF04851 Type III restriction enzyme, res subunit ACH33_06930 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ACH33_06930 PF17764 3′ DNA-binding domain (3′BD) ACH33_06930 PF18074 Primosomal protein N C-terminal domain ACH33_06930 PF00271 Helicase conserved C-terminal domain ACH33_06935 PF01327 Polypeptide deformylase ACH33_06940 PF02911 Formyl transferase, C-terminal domain ACH33_06940 PF00551 Formyl transferase ACH33_06945 PF01189 16S rRNA methyltransferase RsmB/F ACH33_06945 PF01029 NusB family ACH33_06950 PF04055 Radical SAM superfamily ACH33_06960 PF00069 Protein kinase domain ACH33_06960 PF03793 PASTA domain ACH33_06965 PF16745 RsgA N-terminal domain ACH33_06965 PF03193 RsgA GTPase ACH33_06970 PF00834 Ribulose-phosphate 3 epimerase family ACH33_06975 PF00830 Ribosomal L28 family ACH33_06980 PF01842 ACT domain ACH33_06980 PF03315 Serine dehydratase beta chain ACH33_06985 PF03313 Serine dehydratase alpha chain ACH33_06990 PF00271 Helicase conserved C-terminal domain ACH33_06990 PF17191 RecG wedge domain ACH33_06990 PF00270 DEAD/DEAH box helicase ACH33_06995 PF02308 MgtC family ACH33_07005 PF01467 Cytidylyltransferase-like ACH33_07010 PF07670 Nucleoside recognition ACH33_07015 PF01734 Patatin-like phospholipase ACH33_07020 PF05362 Lon protease (S16) C-terminal proteolytic domain ACH33_07020 PF13180 PDZ domain ACH33_07025 PF05636 HIGH Nucleotidyl Transferase ACH33_07035 PF01783 Ribosomal L32p protein family ACH33_07040 PF00082 Subtilase family ACH33_07050 PF03061 Thioesterase superfamily ACH33_07055 PF02504 Fatty acid synthesis protein ACH33_07060 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACH33_07060 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACH33_07065 PF00698 Acyl transferase domain ACH33_07075 PF00550 Phosphopantetheine attachment site ACH33_07080 PF00109 Beta-ketoacyl synthase, N-terminal domain ACH33_07080 PF02801 Beta-ketoacyl synthase, C-terminal domain ACH33_07085 PF00035 Double-stranded RNA binding motif ACH33_07085 PF14622 Ribonuclease-III-like ACH33_07090 PF04055 Radical SAM superfamily ACH33_07090 PF06969 HemN C-terminal domain ACH33_07095 PF02463 RecF/RecN/SMC N terminal domain ACH33_07095 PF06470 SMC proteins Flexible Hinge Domain ACH33_07100 PF02881 SRP54-type protein, helical bundle domain ACH33_07100 PF00448 SRP54-type protein, GTPase domain ACH33_07110 PF00448 SRP54-type protein, GTPase domain ACH33_07110 PF02978 Signal peptide binding domain ACH33_07110 PF02881 SRP54-type protein, helical bundle domain ACH33_07115 PF00886 Ribosomal protein S16 ACH33_07130 PF01782 RimM N-terminal domain ACH33_07130 PF05239 PRC-barrel domain ACH33_07135 PF01746 tRNA (Guanine-1)-methyltransferase ACH33_07140 PF01245 Ribosomal protein L19 ACH33_07145 PF10502 Signal peptidase, peptidase S26 ACH33_07150 PF01926 50S ribosome-binding GTPase ACH33_07155 PF01351 Ribonuclease HII ACH33_07165 PF01312 FlhB HrpN YscU SpaS Family ACH33_07170 PF02021 Uncharacterised protein family UPF0102 ACH33_07175 PF13335 Magnesium chelatase, subunit ChlI C-terminal ACH33_07175 PF01078 Magnesium chelatase, subunit ChlI ACH33_07185 PF00549 CoA-ligase ACH33_07185 PF08442 ATP-grasp domain ACH33_07190 PF00549 CoA-ligase ACH33_07190 PF02629 CoA binding domain ACH33_07195 PF17782 DprA winged helix domain ACH33_07195 PF02481 DNA recombination-mediator protein A ACH33_07200 PF01131 DNA topoisomerase ACH33_07200 PF01751 Toprim domain ACH33_07200 PF01396 Topoisomerase DNA binding C4 zinc finger ACH33_07205 PF01134 Glucose inhibited division protein A ACH33_07210 PF00589 Phage integrase family ACH33_07210 PF02899 Phage integrase, N-terminal SAM-like domain ACH33_07215 PF00227 Proteasome subunit ACH33_07220 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_07220 PF07724 AAA domain (Cdc48 subfamily) ACH33_07220 PF10431 C-terminal, D2-small domain, of ClpB protein ACH33_07225 PF06018 CodY GAF-like domain ACH33_07225 PF08222 CodY helix-turn-helix domain ACH33_07230 PF00460 Flagella basal body rod protein ACH33_07235 PF00460 Flagella basal body rod protein ACH33_07235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACH33_07240 PF02049 Flagellar hook-basal body complex protein FliE ACH33_07245 PF08345 Flagellar M-ring protein C-terminal ACH33_07245 PF01514 Secretory protein of YscJ/FliF family ACH33_07250 PF14842 FliG N-terminal domain ACH33_07250 PF14841 FliG middle domain ACH33_07250 PF01706 FliG C-terminal domain ACH33_07255 PF02108 Flagellar assembly protein FliH ACH33_07260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ACH33_07260 PF02874 ATP synthase alpha/beta family, beta-barrel domain ACH33_07260 PF18269 T3SS EscN ATPase C-terminal domain ACH33_07265 PF02050 Flagellar FliJ protein ACH33_07275 PF02120 Flagellar hook-length control protein FliK ACH33_07280 PF03963 Flagellar hook capping protein - N-terminal region ACH33_07290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ACH33_07290 PF00460 Flagella basal body rod protein ACH33_07295 PF06289 Flagellar and Swarming motility proteins ACH33_07305 PF02154 Flagellar motor switch protein FliM ACH33_07305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACH33_07310 PF04509 CheC-like family ACH33_07310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ACH33_07315 PF00072 Response regulator receiver domain ACH33_07320 PF04347 Flagellar biosynthesis protein, FliO ACH33_07325 PF00813 FliP family ACH33_07330 PF01313 Bacterial export proteins, family 3 ACH33_07335 PF01311 Bacterial export proteins, family 1 ACH33_07340 PF01312 FlhB HrpN YscU SpaS Family ACH33_07345 PF00771 FHIPEP family ACH33_07350 PF00448 SRP54-type protein, GTPase domain ACH33_07355 PF10609 NUBPL iron-transfer P-loop NTPase ACH33_07360 PF00072 Response regulator receiver domain ACH33_07360 PF01339 CheB methylesterase ACH33_07365 PF02895 Signal transducing histidine kinase, homodimeric domain ACH33_07365 PF07194 P2 response regulator binding domain ACH33_07365 PF01627 Hpt domain ACH33_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_07365 PF01584 CheW-like domain ACH33_07370 PF01584 CheW-like domain ACH33_07375 PF04509 CheC-like family ACH33_07380 PF03975 CheD chemotactic sensory transduction ACH33_07390 PF04545 Sigma-70, region 4 ACH33_07390 PF04542 Sigma-70 region 2 ACH33_07390 PF04539 Sigma-70 region 3 ACH33_07410 PF00318 Ribosomal protein S2 ACH33_07415 PF00889 Elongation factor TS ACH33_07420 PF00696 Amino acid kinase family ACH33_07425 PF01765 Ribosome recycling factor ACH33_07430 PF01255 Putative undecaprenyl diphosphate synthase ACH33_07440 PF13288 DXP reductoisomerase C-terminal domain ACH33_07440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACH33_07440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ACH33_07445 PF02163 Peptidase family M50 ACH33_07445 PF13180 PDZ domain ACH33_07450 PF03129 Anticodon binding domain ACH33_07450 PF04073 Aminoacyl-tRNA editing domain ACH33_07450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACH33_07455 PF11490 DNA polymerase III polC-type N-terminus II ACH33_07455 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACH33_07455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACH33_07455 PF14579 Helix-hairpin-helix motif ACH33_07455 PF02811 PHP domain ACH33_07455 PF00929 Exonuclease ACH33_07455 PF14480 DNA polymerase III polC-type N-terminus I ACH33_07460 PF17384 RimP C-terminal SH3 domain ACH33_07460 PF02576 RimP N-terminal domain ACH33_07465 PF00575 S1 RNA binding domain ACH33_07465 PF13184 NusA-like KH domain ACH33_07465 PF08529 NusA N-terminal domain ACH33_07470 PF04296 Protein of unknown function (DUF448) ACH33_07475 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ACH33_07480 PF00009 Elongation factor Tu GTP binding domain ACH33_07480 PF11987 Translation-initiation factor 2 ACH33_07480 PF04760 Translation initiation factor IF-2, N-terminal region ACH33_07485 PF02033 Ribosome-binding factor A ACH33_07490 PF01368 DHH family ACH33_07490 PF02272 DHHA1 domain ACH33_07495 PF16198 tRNA pseudouridylate synthase B C-terminal domain ACH33_07495 PF01509 TruB family pseudouridylate synthase (N terminal domain) ACH33_07500 PF01687 Riboflavin kinase ACH33_07500 PF06574 FAD synthetase ACH33_07505 PF00312 Ribosomal protein S15 ACH33_07510 PF01138 3' exoribonuclease family, domain 1 ACH33_07510 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ACH33_07510 PF00575 S1 RNA binding domain ACH33_07510 PF00013 KH domain ACH33_07510 PF03725 3' exoribonuclease family, domain 2 ACH33_07515 PF01522 Polysaccharide deacetylase ACH33_07520 PF00675 Insulinase (Peptidase family M16) ACH33_07520 PF05193 Peptidase M16 inactive domain ACH33_07525 PF00692 dUTPase ACH33_07535 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACH33_07535 PF16924 Dipicolinate synthase subunit A N-terminal domain ACH33_07540 PF02441 Flavoprotein ACH33_07545 PF02774 Semialdehyde dehydrogenase, dimerisation domain ACH33_07545 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACH33_07550 PF00696 Amino acid kinase family ACH33_07550 PF13840 ACT domain ACH33_07555 PF00701 Dihydrodipicolinate synthetase family ACH33_07560 PF00753 Metallo-beta-lactamase superfamily ACH33_07560 PF17770 Ribonuclease J C-terminal domain ACH33_07560 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ACH33_07565 PF00589 Phage integrase family ACH33_07565 PF14659 Phage integrase, N-terminal SAM-like domain ACH33_07600 PF01385 Probable transposase ACH33_07600 PF12323 Helix-turn-helix domain ACH33_07600 PF07282 Putative transposase DNA-binding domain ACH33_07610 PF17728 BsuBI/PstI restriction endonuclease HTH domain ACH33_07610 PF06616 BsuBI/PstI restriction endonuclease domain ACH33_07715 PF01695 IstB-like ATP binding protein ACH33_07740 PF02915 Rubrerythrin ACH33_07780 PF01555 DNA methylase ACH33_07810 PF04327 Cysteine protease Prp ACH33_07835 PF04883 Bacteriophage HK97-gp10, putative tail-component ACH33_07925 PF05105 Bacteriophage holin family ACH33_07930 PF13539 D-alanyl-D-alanine carboxypeptidase ACH33_07945 PF00665 Integrase core domain ACH33_07945 PF13333 Integrase core domain ACH33_07980 PF13276 HTH-like domain ACH33_07980 PF00665 Integrase core domain ACH33_07980 PF13333 Integrase core domain ACH33_07985 PF02915 Rubrerythrin ACH33_08015 PF03591 AzlC protein ACH33_08035 PF00989 PAS fold ACH33_08035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_08035 PF08447 PAS fold ACH33_08035 PF00512 His Kinase A (phospho-acceptor) domain ACH33_08040 PF02801 Beta-ketoacyl synthase, C-terminal domain ACH33_08040 PF00109 Beta-ketoacyl synthase, N-terminal domain ACH33_08050 PF00535 Glycosyl transferase family 2 ACH33_08065 PF00893 Small Multidrug Resistance protein ACH33_08070 PF00893 Small Multidrug Resistance protein ACH33_08075 PF03845 Spore germination protein ACH33_08080 PF03323 Bacillus/Clostridium GerA spore germination protein ACH33_08090 PF05525 Branched-chain amino acid transport protein ACH33_08095 PF00378 Enoyl-CoA hydratase/isomerase ACH33_08100 PF00501 AMP-binding enzyme ACH33_08100 PF14535 AMP-binding enzyme C-terminal domain ACH33_08105 PF00378 Enoyl-CoA hydratase/isomerase ACH33_08110 PF00378 Enoyl-CoA hydratase/isomerase ACH33_08115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACH33_08115 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ACH33_08115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACH33_08120 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACH33_08120 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACH33_08125 PF00108 Thiolase, N-terminal domain ACH33_08125 PF02803 Thiolase, C-terminal domain ACH33_08130 PF00108 Thiolase, N-terminal domain ACH33_08130 PF02803 Thiolase, C-terminal domain ACH33_08140 PF05138 Phenylacetic acid catabolic protein ACH33_08155 PF01883 Iron-sulfur cluster assembly protein ACH33_08160 PF00171 Aldehyde dehydrogenase family ACH33_08170 PF03358 NADPH-dependent FMN reductase ACH33_08190 PF10776 Protein of unknown function (DUF2600) ACH33_08195 PF04445 Putative SAM-dependent methyltransferase ACH33_08205 PF17209 Hfq protein ACH33_08215 PF00005 ABC transporter ACH33_08215 PF09383 NIL domain ACH33_08220 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_08235 PF00873 AcrB/AcrD/AcrF family ACH33_08250 PF00188 Cysteine-rich secretory protein family ACH33_08255 PF17866 AAA lid domain ACH33_08255 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_08260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ACH33_08265 PF07690 Major Facilitator Superfamily ACH33_08275 PF00440 Bacterial regulatory proteins, tetR family ACH33_08285 PF03473 MOSC domain ACH33_08285 PF03475 3-alpha domain ACH33_08295 PF00498 FHA domain ACH33_08295 PF00005 ABC transporter ACH33_08295 PF01061 ABC-2 type transporter ACH33_08320 PF07504 Fungalysin/Thermolysin Propeptide Motif ACH33_08320 PF03413 Peptidase propeptide and YPEB domain ACH33_08320 PF02868 Thermolysin metallopeptidase, alpha-helical domain ACH33_08320 PF01447 Thermolysin metallopeptidase, catalytic domain ACH33_08325 PF13358 DDE superfamily endonuclease ACH33_08335 PF00258 Flavodoxin ACH33_08340 PF04647 Accessory gene regulator B ACH33_08345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_08345 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ACH33_08395 PF00331 Glycosyl hydrolase family 10 ACH33_08395 PF06452 Carbohydrate family 9 binding domain-like ACH33_08395 PF00395 S-layer homology domain ACH33_08395 PF02018 Carbohydrate binding domain ACH33_08400 PF00893 Small Multidrug Resistance protein ACH33_08405 PF13667 ThiC-associated domain ACH33_08405 PF01964 Radical SAM ThiC family ACH33_08410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACH33_08410 PF13378 Enolase C-terminal domain-like ACH33_08415 PF01546 Peptidase family M20/M25/M40 ACH33_08415 PF07687 Peptidase dimerisation domain ACH33_08425 PF01695 IstB-like ATP binding protein ACH33_08430 PF00665 Integrase core domain ACH33_08430 PF02796 Helix-turn-helix domain of resolvase ACH33_08445 PF17200 Single Cache domain 2 ACH33_08445 PF00672 HAMP domain ACH33_08445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_08460 PF17853 GGDEF-like domain ACH33_08460 PF13556 PucR C-terminal helix-turn-helix domain ACH33_08460 PF05651 Putative sugar diacid recognition ACH33_08465 PF00171 Aldehyde dehydrogenase family ACH33_08470 PF00202 Aminotransferase class-III ACH33_08480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ACH33_08480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ACH33_08490 PF04960 Glutaminase ACH33_08495 PF17932 Tetracyclin repressor-like, C-terminal domain ACH33_08495 PF00440 Bacterial regulatory proteins, tetR family ACH33_08500 PF17329 Family of unknown function (DUF5367) ACH33_08505 PF00589 Phage integrase family ACH33_08565 PF09588 YqaJ-like viral recombinase domain ACH33_08620 PF04237 YjbR ACH33_08635 PF10668 Phage terminase small subunit ACH33_08635 PF03592 Terminase small subunit ACH33_08640 PF17288 Terminase RNAseH like domain ACH33_08640 PF04466 Phage terminase large subunit ACH33_08740 PF04865 Baseplate J-like protein ACH33_08765 PF05105 Bacteriophage holin family ACH33_08770 PF13539 D-alanyl-D-alanine carboxypeptidase ACH33_08775 PF00072 Response regulator receiver domain ACH33_08775 PF00486 Transcriptional regulatory protein, C terminal ACH33_08780 PF00989 PAS fold ACH33_08780 PF00512 His Kinase A (phospho-acceptor) domain ACH33_08780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_08780 PF00672 HAMP domain ACH33_08790 PF02626 Carboxyltransferase domain, subdomain A and B ACH33_08800 PF02785 Biotin carboxylase C-terminal domain ACH33_08800 PF00289 Biotin carboxylase, N-terminal domain ACH33_08800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACH33_08805 PF03746 LamB/YcsF family ACH33_08810 PF00158 Sigma-54 interaction domain ACH33_08810 PF00989 PAS fold ACH33_08810 PF02954 Bacterial regulatory protein, Fis family ACH33_08820 PF02626 Carboxyltransferase domain, subdomain A and B ACH33_08825 PF00483 Nucleotidyl transferase ACH33_08830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ACH33_08830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ACH33_08830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ACH33_08835 PF01636 Phosphotransferase enzyme family ACH33_08845 PF13439 Glycosyltransferase Family 4 ACH33_08845 PF00534 Glycosyl transferases group 1 ACH33_08850 PF00534 Glycosyl transferases group 1 ACH33_08850 PF13439 Glycosyltransferase Family 4 ACH33_08855 PF01370 NAD dependent epimerase/dehydratase family ACH33_08860 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ACH33_08875 PF02322 Cytochrome bd terminal oxidase subunit II ACH33_08880 PF01654 Cytochrome bd terminal oxidase subunit I ACH33_08890 PF00440 Bacterial regulatory proteins, tetR family ACH33_08890 PF08361 MAATS-type transcriptional repressor, C-terminal region ACH33_08895 PF01494 FAD binding domain ACH33_08900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACH33_08900 PF01411 tRNA synthetases class II (A) ACH33_08900 PF02272 DHHA1 domain ACH33_08905 PF01978 Sugar-specific transcriptional regulator TrmB ACH33_08905 PF11495 Archaeal transcriptional regulator TrmB ACH33_08920 PF01497 Periplasmic binding protein ACH33_08920 PF12833 Helix-turn-helix domain ACH33_08925 PF01497 Periplasmic binding protein ACH33_08930 PF01032 FecCD transport family ACH33_08935 PF01032 FecCD transport family ACH33_08940 PF00756 Putative esterase ACH33_08945 PF00881 Nitroreductase family ACH33_08960 PF00005 ABC transporter ACH33_08965 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_08970 PF13419 Haloacid dehalogenase-like hydrolase ACH33_08975 PF00266 Aminotransferase class-V ACH33_08985 PF08220 DeoR-like helix-turn-helix domain ACH33_08985 PF00455 DeoR C terminal sensor domain ACH33_08990 PF01554 MatE ACH33_09000 PF07690 Major Facilitator Superfamily ACH33_09010 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) ACH33_09015 PF07690 Major Facilitator Superfamily ACH33_09020 PF04284 Protein of unknown function (DUF441) ACH33_09025 PF04029 2-phosphosulpholactate phosphatase ACH33_09040 PF02754 Cysteine-rich domain ACH33_09045 PF13183 4Fe-4S dicluster domain ACH33_09045 PF11870 Domain of unknown function (DUF3390) ACH33_09045 PF02589 LUD domain ACH33_09050 PF02589 LUD domain ACH33_09055 PF03323 Bacillus/Clostridium GerA spore germination protein ACH33_09060 PF03845 Spore germination protein ACH33_09065 PF05504 Spore germination B3/ GerAC like, C-terminal ACH33_09075 PF02566 OsmC-like protein ACH33_09085 PF00324 Amino acid permease ACH33_09095 PF00293 NUDIX domain ACH33_09095 PF13344 Haloacid dehalogenase-like hydrolase ACH33_09105 PF00072 Response regulator receiver domain ACH33_09105 PF01584 CheW-like domain ACH33_09120 PF13167 GTP-binding GTPase N-terminal ACH33_09120 PF16360 GTP-binding GTPase Middle Region ACH33_09120 PF01926 50S ribosome-binding GTPase ACH33_09125 PF06838 Methionine gamma-lyase ACH33_09130 PF13411 MerR HTH family regulatory protein ACH33_09135 PF03951 Glutamine synthetase, beta-Grasp domain ACH33_09135 PF00120 Glutamine synthetase, catalytic domain ACH33_09140 PF00512 His Kinase A (phospho-acceptor) domain ACH33_09140 PF00672 HAMP domain ACH33_09140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_09140 PF13426 PAS domain ACH33_09145 PF00072 Response regulator receiver domain ACH33_09145 PF00486 Transcriptional regulatory protein, C terminal ACH33_09180 PF00005 ABC transporter ACH33_09180 PF00664 ABC transporter transmembrane region ACH33_09190 PF02361 Cobalt transport protein ACH33_09195 PF00005 ABC transporter ACH33_09200 PF09819 ABC-type cobalt transport system, permease component ACH33_09205 PF03070 TENA/THI-4/PQQC family ACH33_09210 PF01925 Sulfite exporter TauE/SafE ACH33_09215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ACH33_09215 PF07730 Histidine kinase ACH33_09215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_09215 PF00672 HAMP domain ACH33_09220 PF00196 Bacterial regulatory proteins, luxR family ACH33_09220 PF00072 Response regulator receiver domain ACH33_09240 PF00005 ABC transporter ACH33_09250 PF00144 Beta-lactamase ACH33_09275 PF03190 Protein of unknown function, DUF255 ACH33_09280 PF03190 Protein of unknown function, DUF255 ACH33_09290 PF01695 IstB-like ATP binding protein ACH33_09295 PF00665 Integrase core domain ACH33_09295 PF02796 Helix-turn-helix domain of resolvase ACH33_09300 PF01569 PAP2 superfamily ACH33_09305 PF09335 SNARE associated Golgi protein ACH33_09310 PF13439 Glycosyltransferase Family 4 ACH33_09310 PF00534 Glycosyl transferases group 1 ACH33_09315 PF00535 Glycosyl transferase family 2 ACH33_09325 PF03190 Protein of unknown function, DUF255 ACH33_09330 PF01906 Putative heavy-metal-binding ACH33_09335 PF06207 Protein of unknown function (DUF1002) ACH33_09340 PF01842 ACT domain ACH33_09340 PF03447 Homoserine dehydrogenase, NAD binding domain ACH33_09340 PF00742 Homoserine dehydrogenase ACH33_09350 PF02675 S-adenosylmethionine decarboxylase ACH33_09355 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ACH33_09355 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ACH33_09370 PF04551 GcpE protein ACH33_09375 PF00375 Sodium:dicarboxylate symporter family ACH33_09385 PF02515 CoA-transferase family III ACH33_09395 PF00085 Thioredoxin ACH33_09400 PF00994 Probable molybdopterin binding domain ACH33_09405 PF03734 L,D-transpeptidase catalytic domain ACH33_09405 PF01476 LysM domain ACH33_09410 PF00108 Thiolase, N-terminal domain ACH33_09410 PF02803 Thiolase, C-terminal domain ACH33_09415 PF00589 Phage integrase family ACH33_09415 PF02899 Phage integrase, N-terminal SAM-like domain ACH33_09420 PF03180 NLPA lipoprotein ACH33_09425 PF01144 Coenzyme A transferase ACH33_09430 PF01144 Coenzyme A transferase ACH33_09440 PF00155 Aminotransferase class I and II ACH33_09445 PF12804 MobA-like NTP transferase domain ACH33_09450 PF03454 MoeA C-terminal region (domain IV) ACH33_09450 PF03453 MoeA N-terminal region (domain I and II) ACH33_09450 PF00994 Probable molybdopterin binding domain ACH33_09455 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ACH33_09460 PF02391 MoaE protein ACH33_09490 PF16326 ABC transporter C-terminal domain ACH33_09490 PF00005 ABC transporter ACH33_09490 PF12848 ABC transporter ACH33_09495 PF00253 Ribosomal protein S14p/S29e ACH33_09500 PF00378 Enoyl-CoA hydratase/isomerase ACH33_09505 PF03601 Conserved hypothetical protein 698 ACH33_09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_09510 PF03466 LysR substrate binding domain ACH33_09515 PF01261 Xylose isomerase-like TIM barrel ACH33_09520 PF00266 Aminotransferase class-V ACH33_09525 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACH33_09525 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ACH33_09530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACH33_09530 PF00384 Molybdopterin oxidoreductase ACH33_09530 PF01568 Molydopterin dinucleotide binding domain ACH33_09555 PF14398 YheC/D like ATP-grasp ACH33_09575 PF05698 Bacterial trigger factor protein (TF) C-terminus ACH33_09600 PF03641 Possible lysine decarboxylase ACH33_09605 PF00929 Exonuclease ACH33_09615 PF04172 LrgB-like family ACH33_09620 PF03788 LrgA family ACH33_09625 PF03466 LysR substrate binding domain ACH33_09625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_09645 PF00082 Subtilase family ACH33_09655 PF00171 Aldehyde dehydrogenase family ACH33_09665 PF07728 AAA domain (dynein-related subfamily) ACH33_09665 PF12102 Domain of unknown function (DUF3578) ACH33_09665 PF07728 AAA domain (dynein-related subfamily) ACH33_09665 PF12102 Domain of unknown function (DUF3578) ACH33_09675 PF01022 Bacterial regulatory protein, arsR family ACH33_09680 PF01758 Sodium Bile acid symporter family ACH33_09685 PF01451 Low molecular weight phosphotyrosine protein phosphatase ACH33_09690 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_09695 PF00877 NlpC/P60 family ACH33_09695 PF01476 LysM domain ACH33_09700 PF00239 Resolvase, N terminal domain ACH33_09705 PF05979 Bacterial protein of unknown function (DUF896) ACH33_09720 PF12729 Four helix bundle sensory module for signal transduction ACH33_09720 PF00672 HAMP domain ACH33_09720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_09735 PF01726 LexA DNA binding domain ACH33_09735 PF00717 Peptidase S24-like ACH33_09775 PF07690 Major Facilitator Superfamily ACH33_09785 PF02913 FAD linked oxidases, C-terminal domain ACH33_09785 PF01565 FAD binding domain ACH33_09790 PF02754 Cysteine-rich domain ACH33_09790 PF13183 4Fe-4S dicluster domain ACH33_09795 PF02913 FAD linked oxidases, C-terminal domain ACH33_09795 PF01565 FAD binding domain ACH33_09800 PF02225 PA domain ACH33_09800 PF04389 Peptidase family M28 ACH33_09820 PF01026 TatD related DNase ACH33_09825 PF03745 Domain of unknown function (DUF309) ACH33_09830 PF16655 PhoD-like phosphatase, N-terminal domain ACH33_09830 PF09423 PhoD-like phosphatase ACH33_09840 PF06725 3D domain ACH33_09840 PF01476 LysM domain ACH33_09845 PF13361 UvrD-like helicase C-terminal domain ACH33_09845 PF12705 PD-(D/E)XK nuclease superfamily ACH33_09845 PF00580 UvrD/REP helicase N-terminal domain ACH33_09850 PF12705 PD-(D/E)XK nuclease superfamily ACH33_09855 PF03737 Aldolase/RraA ACH33_09860 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ACH33_09860 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ACH33_09860 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ACH33_09875 PF01554 MatE ACH33_09880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_09880 PF00672 HAMP domain ACH33_09880 PF02743 Cache domain ACH33_09890 PF00155 Aminotransferase class I and II ACH33_09890 PF00392 Bacterial regulatory proteins, gntR family ACH33_09895 PF01174 SNO glutamine amidotransferase family ACH33_09900 PF01680 SOR/SNZ family ACH33_09905 PF03061 Thioesterase superfamily ACH33_09910 PF01751 Toprim domain ACH33_09910 PF01131 DNA topoisomerase ACH33_09915 PF04072 Leucine carboxyl methyltransferase ACH33_09920 PF00324 Amino acid permease ACH33_09925 PF00202 Aminotransferase class-III ACH33_09930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ACH33_09930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ACH33_09935 PF06130 Phosphate propanoyltransferase ACH33_09940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACH33_09940 PF00205 Thiamine pyrophosphate enzyme, central domain ACH33_09940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ACH33_09950 PF07840 FadR C-terminal domain ACH33_09950 PF00392 Bacterial regulatory proteins, gntR family ACH33_09980 PF13462 Thioredoxin ACH33_09990 PF00440 Bacterial regulatory proteins, tetR family ACH33_09990 PF17934 Tetracyclin repressor-like, C-terminal domain ACH33_09995 PF00266 Aminotransferase class-V ACH33_10000 PF04199 Putative cyclase ACH33_10010 PF00209 Sodium:neurotransmitter symporter family ACH33_10015 PF03060 Nitronate monooxygenase ACH33_10025 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACH33_10030 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ACH33_10040 PF08241 Methyltransferase domain ACH33_10050 PF00753 Metallo-beta-lactamase superfamily ACH33_10050 PF16123 Hydroxyacylglutathione hydrolase C-terminus ACH33_10065 PF13276 HTH-like domain ACH33_10065 PF13683 Integrase core domain ACH33_10085 PF00589 Phage integrase family ACH33_10085 PF14659 Phage integrase, N-terminal SAM-like domain ACH33_10095 PF02592 Putative vitamin uptake transporter ACH33_10100 PF02028 BCCT, betaine/carnitine/choline family transporter ACH33_10105 PF00892 EamA-like transporter family ACH33_10110 PF03466 LysR substrate binding domain ACH33_10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_10120 PF07690 Major Facilitator Superfamily ACH33_10125 PF07729 FCD domain ACH33_10125 PF00392 Bacterial regulatory proteins, gntR family ACH33_10130 PF01520 N-acetylmuramoyl-L-alanine amidase ACH33_10130 PF05036 Sporulation related domain ACH33_10140 PF02538 Hydantoinase B/oxoprolinase ACH33_10145 PF01968 Hydantoinase/oxoprolinase ACH33_10145 PF05378 Hydantoinase/oxoprolinase N-terminal region ACH33_10155 PF00403 Heavy-metal-associated domain ACH33_10165 PF00403 Heavy-metal-associated domain ACH33_10170 PF09587 Bacterial capsule synthesis protein PGA_cap ACH33_10175 PF07690 Major Facilitator Superfamily ACH33_10185 PF12102 Domain of unknown function (DUF3578) ACH33_10185 PF07728 AAA domain (dynein-related subfamily) ACH33_10190 PF13476 AAA domain ACH33_10195 PF12320 Type 5 capsule protein repressor C-terminal domain ACH33_10195 PF00149 Calcineurin-like phosphoesterase ACH33_10200 PF10750 Protein of unknown function (DUF2536) ACH33_10255 PF13039 Protein of unknown function (DUF3900) ACH33_10255 PF13037 Domain of unknown function (DUF3898) ACH33_10265 PF05343 M42 glutamyl aminopeptidase ACH33_10290 PF00579 tRNA synthetases class I (W and Y) ACH33_10295 PF00579 tRNA synthetases class I (W and Y) ACH33_10310 PF02806 Alpha amylase, C-terminal all-beta domain ACH33_10310 PF00128 Alpha amylase, catalytic domain ACH33_10310 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ACH33_10330 PF13840 ACT domain ACH33_10330 PF00696 Amino acid kinase family ACH33_10340 PF04346 Ethanolamine utilisation protein, EutH ACH33_10345 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ACH33_10350 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ACH33_10355 PF00936 BMC domain ACH33_10360 PF03319 Ethanolamine utilisation protein EutN/carboxysome ACH33_10370 PF00936 BMC domain ACH33_10375 PF00465 Iron-containing alcohol dehydrogenase ACH33_10375 PF00171 Aldehyde dehydrogenase family ACH33_10380 PF00936 BMC domain ACH33_10385 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ACH33_10390 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ACH33_10395 PF06277 Ethanolamine utilisation protein EutA ACH33_10400 PF03861 ANTAR domain ACH33_10400 PF00072 Response regulator receiver domain ACH33_10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_10405 PF07568 Histidine kinase ACH33_10405 PF12282 Signal transduction histidine kinase ACH33_10410 PF10662 Ethanolamine utilisation - propanediol utilisation ACH33_10415 PF00936 BMC domain ACH33_10430 PF02779 Transketolase, pyrimidine binding domain ACH33_10430 PF00456 Transketolase, thiamine diphosphate binding domain ACH33_10430 PF02780 Transketolase, C-terminal domain ACH33_10435 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACH33_10440 PF13291 ACT domain ACH33_10440 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_10450 PF03553 Na+/H+ antiporter family ACH33_10450 PF13726 Na+-H+ antiporter family ACH33_10455 PF00578 AhpC/TSA family ACH33_10460 PF08439 Oligopeptidase F ACH33_10460 PF01432 Peptidase family M3 ACH33_10465 PF00248 Aldo/keto reductase family ACH33_10470 PF02687 FtsX-like permease family ACH33_10475 PF00005 ABC transporter ACH33_10480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_10485 PF00486 Transcriptional regulatory protein, C terminal ACH33_10485 PF00072 Response regulator receiver domain ACH33_10490 PF00350 Dynamin family ACH33_10500 PF00324 Amino acid permease ACH33_10505 PF00877 NlpC/P60 family ACH33_10505 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain ACH33_10510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ACH33_10510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ACH33_10515 PF07486 Cell Wall Hydrolase ACH33_10535 PF02540 NAD synthase ACH33_10540 PF04851 Type III restriction enzyme, res subunit ACH33_10540 PF13307 Helicase C-terminal domain ACH33_10545 PF16363 GDP-mannose 4,6 dehydratase ACH33_10555 PF01728 FtsJ-like methyltransferase ACH33_10560 PF01050 Mannose-6-phosphate isomerase ACH33_10560 PF00483 Nucleotidyl transferase ACH33_10570 PF13181 Tetratricopeptide repeat ACH33_10570 PF00535 Glycosyl transferase family 2 ACH33_10575 PF13181 Tetratricopeptide repeat ACH33_10575 PF00535 Glycosyl transferase family 2 ACH33_10580 PF07098 Protein of unknown function (DUF1360) ACH33_10625 PF18277 AbrB C-terminal domain ACH33_10625 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ACH33_10640 PF09587 Bacterial capsule synthesis protein PGA_cap ACH33_10645 PF03466 LysR substrate binding domain ACH33_10645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ACH33_10650 PF00330 Aconitase family (aconitate hydratase) ACH33_10655 PF00694 Aconitase C-terminal domain ACH33_10665 PF01432 Peptidase family M3 ACH33_10665 PF08439 Oligopeptidase F ACH33_10670 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ACH33_10670 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ACH33_10675 PF00575 S1 RNA binding domain ACH33_10685 PF00986 DNA gyrase B subunit, carboxyl terminus ACH33_10685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_10685 PF01751 Toprim domain ACH33_10685 PF00204 DNA gyrase B ACH33_10690 PF02581 Thiamine monophosphate synthase ACH33_10695 PF02110 Hydroxyethylthiazole kinase family ACH33_10705 PF01619 Proline dehydrogenase ACH33_10710 PF13426 PAS domain ACH33_10710 PF02954 Bacterial regulatory protein, Fis family ACH33_10710 PF00158 Sigma-54 interaction domain ACH33_10715 PF00465 Iron-containing alcohol dehydrogenase ACH33_10725 PF00465 Iron-containing alcohol dehydrogenase ACH33_10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_10730 PF00512 His Kinase A (phospho-acceptor) domain ACH33_10730 PF00989 PAS fold ACH33_10735 PF02954 Bacterial regulatory protein, Fis family ACH33_10735 PF00072 Response regulator receiver domain ACH33_10735 PF00158 Sigma-54 interaction domain ACH33_10745 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACH33_10745 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACH33_10745 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACH33_10745 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACH33_10760 PF00483 Nucleotidyl transferase ACH33_10765 PF01238 Phosphomannose isomerase type I ACH33_10770 PF00753 Metallo-beta-lactamase superfamily ACH33_10780 PF00326 Prolyl oligopeptidase family ACH33_10785 PF00704 Glycosyl hydrolases family 18 ACH33_10785 PF01476 LysM domain ACH33_10790 PF00892 EamA-like transporter family ACH33_10795 PF01152 Bacterial-like globin ACH33_10810 PF00691 OmpA family ACH33_10810 PF00223 Photosystem I psaA/psaB protein ACH33_10835 PF01381 Helix-turn-helix ACH33_10845 PF02796 Helix-turn-helix domain of resolvase ACH33_10845 PF00239 Resolvase, N terminal domain ACH33_10850 PF01476 LysM domain ACH33_10850 PF00704 Glycosyl hydrolases family 18 ACH33_10860 PF01569 PAP2 superfamily ACH33_10865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACH33_10865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ACH33_10870 PF01520 N-acetylmuramoyl-L-alanine amidase ACH33_10870 PF04122 Putative cell wall binding repeat 2 ACH33_10875 PF01432 Peptidase family M3 ACH33_10875 PF08439 Oligopeptidase F ACH33_10880 PF10576 Iron-sulfur binding domain of endonuclease III ACH33_10880 PF00730 HhH-GPD superfamily base excision DNA repair protein ACH33_10880 PF00633 Helix-hairpin-helix motif ACH33_10890 PF00501 AMP-binding enzyme ACH33_10890 PF13193 AMP-binding enzyme C-terminal domain ACH33_10895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACH33_10895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACH33_10895 PF02770 Acyl-CoA dehydrogenase, middle domain ACH33_10900 PF02803 Thiolase, C-terminal domain ACH33_10900 PF00108 Thiolase, N-terminal domain ACH33_10905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ACH33_10905 PF00378 Enoyl-CoA hydratase/isomerase ACH33_10905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ACH33_10920 PF00271 Helicase conserved C-terminal domain ACH33_10920 PF01043 SecA preprotein cross-linking domain ACH33_10920 PF07516 SecA Wing and Scaffold domain ACH33_10920 PF02810 SEC-C motif ACH33_10920 PF07517 SecA DEAD-like domain ACH33_10925 PF13509 S1 domain ACH33_10925 PF17783 CvfB-like winged helix domain ACH33_10930 PF00580 UvrD/REP helicase N-terminal domain ACH33_10930 PF13361 UvrD-like helicase C-terminal domain ACH33_10935 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ACH33_10935 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ACH33_10955 PF00730 HhH-GPD superfamily base excision DNA repair protein ACH33_10965 PF12822 ECF transporter, substrate-specific component ACH33_10975 PF09397 Ftsk gamma domain ACH33_10975 PF17854 FtsK alpha domain ACH33_10975 PF01580 FtsK/SpoIIIE family ACH33_10980 PF04542 Sigma-70 region 2 ACH33_10980 PF08281 Sigma-70, region 4 ACH33_10990 PF13732 Domain of unknown function (DUF4162) ACH33_10990 PF00005 ABC transporter ACH33_11005 PF04073 Aminoacyl-tRNA editing domain ACH33_11005 PF03129 Anticodon binding domain ACH33_11005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACH33_11010 PF01061 ABC-2 type transporter ACH33_11035 PF11188 Protein of unknown function (DUF2975) ACH33_11040 PF13443 Cro/C1-type HTH DNA-binding domain ACH33_11070 PF14659 Phage integrase, N-terminal SAM-like domain ACH33_11070 PF00589 Phage integrase family ACH33_11075 PF14035 YlzJ-like protein ACH33_11080 PF00574 Clp protease ACH33_11085 PF09335 SNARE associated Golgi protein ACH33_11110 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ACH33_11115 PF03837 RecT family ACH33_11120 PF09588 YqaJ-like viral recombinase domain ACH33_11125 PF01381 Helix-turn-helix ACH33_11130 PF00710 Asparaginase, N-terminal ACH33_11130 PF17763 Glutaminase/Asparaginase C-terminal domain ACH33_11135 PF01235 Sodium:alanine symporter family ACH33_11140 PF02492 CobW/HypB/UreG, nucleotide-binding domain ACH33_11140 PF07683 Cobalamin synthesis protein cobW C-terminal domain ACH33_11145 PF01809 Putative membrane protein insertion efficiency factor ACH33_11150 PF00158 Sigma-54 interaction domain ACH33_11150 PF02954 Bacterial regulatory protein, Fis family ACH33_11150 PF13426 PAS domain ACH33_11155 PF07943 Penicillin-binding protein 5, C-terminal domain ACH33_11155 PF00768 D-alanyl-D-alanine carboxypeptidase ACH33_11160 PF01225 Mur ligase family, catalytic domain ACH33_11160 PF02875 Mur ligase family, glutamate ligase domain ACH33_11160 PF08245 Mur ligase middle domain ACH33_11165 PF01497 Periplasmic binding protein ACH33_11175 PF01032 FecCD transport family ACH33_11180 PF01032 FecCD transport family ACH33_11185 PF00005 ABC transporter ACH33_11190 PF00266 Aminotransferase class-V ACH33_11195 PF00149 Calcineurin-like phosphoesterase ACH33_11200 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ACH33_11240 PF01551 Peptidase family M23 ACH33_11260 PF00464 Serine hydroxymethyltransferase ACH33_11280 PF02080 TrkA-C domain ACH33_11280 PF18030 RimK PreATP-grasp domain ACH33_11280 PF08443 RimK-like ATP-grasp domain ACH33_11285 PF00202 Aminotransferase class-III ACH33_11290 PF01820 D-ala D-ala ligase N-terminus ACH33_11290 PF07478 D-ala D-ala ligase C-terminus ACH33_11300 PF14489 QueF-like protein ACH33_11305 PF01227 GTP cyclohydrolase I ACH33_11315 PF06508 Queuosine biosynthesis protein QueC ACH33_11320 PF04055 Radical SAM superfamily ACH33_11340 PF00701 Dihydrodipicolinate synthetase family ACH33_11345 PF00171 Aldehyde dehydrogenase family ACH33_11350 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_11350 PF04324 BFD-like [2Fe-2S] binding domain ACH33_11365 PF02954 Bacterial regulatory protein, Fis family ACH33_11365 PF00158 Sigma-54 interaction domain ACH33_11365 PF00989 PAS fold ACH33_11370 PF01266 FAD dependent oxidoreductase ACH33_11375 PF05544 Proline racemase ACH33_11380 PF13520 Amino acid permease ACH33_11385 PF01522 Polysaccharide deacetylase ACH33_11390 PF00989 PAS fold ACH33_11390 PF00512 His Kinase A (phospho-acceptor) domain ACH33_11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_11390 PF16736 Single Cache-like ACH33_11395 PF00486 Transcriptional regulatory protein, C terminal ACH33_11395 PF00072 Response regulator receiver domain ACH33_11400 PF07732 Multicopper oxidase ACH33_11405 PF12787 EcsC protein family ACH33_11415 PF00881 Nitroreductase family ACH33_11440 PF00668 Condensation domain ACH33_11440 PF00550 Phosphopantetheine attachment site ACH33_11440 PF00975 Thioesterase domain ACH33_11440 PF00501 AMP-binding enzyme ACH33_11440 PF13193 AMP-binding enzyme C-terminal domain ACH33_11445 PF00550 Phosphopantetheine attachment site ACH33_11445 PF00668 Condensation domain ACH33_11445 PF13193 AMP-binding enzyme C-terminal domain ACH33_11445 PF00501 AMP-binding enzyme ACH33_11455 PF01648 4'-phosphopantetheinyl transferase superfamily ACH33_11460 PF00975 Thioesterase domain ACH33_11465 PF00440 Bacterial regulatory proteins, tetR family ACH33_11470 PF01040 UbiA prenyltransferase family ACH33_11475 PF08240 Alcohol dehydrogenase GroES-like domain ACH33_11475 PF00107 Zinc-binding dehydrogenase ACH33_11475 PF13823 Alcohol dehydrogenase GroES-associated ACH33_11480 PF00042 Globin ACH33_11480 PF00970 Oxidoreductase FAD-binding domain ACH33_11480 PF00175 Oxidoreductase NAD-binding domain ACH33_11485 PF00175 Oxidoreductase NAD-binding domain ACH33_11485 PF00042 Globin ACH33_11485 PF00970 Oxidoreductase FAD-binding domain ACH33_11500 PF03063 Prismane/CO dehydrogenase family ACH33_11505 PF01380 SIS domain ACH33_11530 PF07833 Copper amine oxidase N-terminal domain ACH33_11545 PF08386 TAP-like protein ACH33_11545 PF00561 alpha/beta hydrolase fold ACH33_11560 PF07478 D-ala D-ala ligase C-terminus ACH33_11560 PF01820 D-ala D-ala ligase N-terminus ACH33_11565 PF03737 Aldolase/RraA ACH33_11565 PF00180 Isocitrate/isopropylmalate dehydrogenase ACH33_11580 PF01063 Amino-transferase class IV ACH33_11590 PF00682 HMGL-like ACH33_11590 PF07836 DmpG-like communication domain ACH33_11595 PF03070 TENA/THI-4/PQQC family ACH33_11600 PF07478 D-ala D-ala ligase C-terminus ACH33_11600 PF01820 D-ala D-ala ligase N-terminus ACH33_11675 PF08676 MutL C terminal dimerisation domain ACH33_11675 PF01119 DNA mismatch repair protein, C-terminal domain ACH33_11680 PF00488 MutS domain V ACH33_11680 PF05190 MutS family domain IV ACH33_11680 PF01624 MutS domain I ACH33_11680 PF05192 MutS domain III ACH33_11705 PF07836 DmpG-like communication domain ACH33_11705 PF00682 HMGL-like ACH33_11710 PF01118 Semialdehyde dehydrogenase, NAD binding domain ACH33_11710 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ACH33_11715 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACH33_11720 PF00171 Aldehyde dehydrogenase family ACH33_11725 PF01042 Endoribonuclease L-PSP ACH33_11735 PF06052 3-hydroxyanthranilic acid dioxygenase ACH33_11740 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ACH33_11740 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ACH33_11765 PF14449 Pre-toxin TG ACH33_11775 PF01695 IstB-like ATP binding protein ACH33_11780 PF02796 Helix-turn-helix domain of resolvase ACH33_11780 PF00665 Integrase core domain ACH33_11795 PF01548 Transposase ACH33_11795 PF02371 Transposase IS116/IS110/IS902 family ACH33_11820 PF04634 Protein of unknown function, DUF600 ACH33_11825 PF14449 Pre-toxin TG ACH33_11900 PF01556 DnaJ C terminal domain ACH33_11900 PF00226 DnaJ domain ACH33_11900 PF00684 DnaJ central domain ACH33_11915 PF00069 Protein kinase domain ACH33_11920 PF10628 Outer spore coat protein E (CotE) ACH33_11940 PF00005 ABC transporter ACH33_11950 PF06133 Control of competence regulator ComK, YlbF/YmcA ACH33_11955 PF00919 Uncharacterized protein family UPF0004 ACH33_11955 PF01938 TRAM domain ACH33_11955 PF04055 Radical SAM superfamily ACH33_11970 PF06962 Putative rRNA methylase ACH33_11975 PF12706 Beta-lactamase superfamily domain ACH33_11980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ACH33_11985 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ACH33_11985 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ACH33_11985 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ACH33_11990 PF04232 Stage V sporulation protein S (SpoVS) ACH33_11995 PF13277 YmdB-like protein ACH33_12000 PF12072 Domain of unknown function (DUF3552) ACH33_12000 PF00013 KH domain ACH33_12000 PF01966 HD domain ACH33_12005 PF02631 RecX family ACH33_12010 PF00154 recA bacterial DNA recombination protein ACH33_12015 PF02632 BioY family ACH33_12025 PF00202 Aminotransferase class-III ACH33_12030 PF00271 Helicase conserved C-terminal domain ACH33_12030 PF00270 DEAD/DEAH box helicase ACH33_12035 PF02464 Competence-damaged protein ACH33_12035 PF18146 Damage-inducible protein CinA KH domain ACH33_12035 PF00994 Probable molybdopterin binding domain ACH33_12040 PF01066 CDP-alcohol phosphatidyltransferase ACH33_12045 PF00919 Uncharacterized protein family UPF0004 ACH33_12045 PF04055 Radical SAM superfamily ACH33_12045 PF18693 TRAM domain ACH33_12050 PF13464 Domain of unknown function (DUF4115) ACH33_12055 PF11868 Protein of unknown function (DUF3388) ACH33_12060 PF11588 Protein of unknown function (DUF3243) ACH33_12070 PF05193 Peptidase M16 inactive domain ACH33_12070 PF00675 Insulinase (Peptidase family M16) ACH33_12075 PF05193 Peptidase M16 inactive domain ACH33_12090 PF00069 Protein kinase domain ACH33_12095 PF00664 ABC transporter transmembrane region ACH33_12095 PF00005 ABC transporter ACH33_12100 PF00581 Rhodanese-like domain ACH33_12105 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ACH33_12105 PF00391 PEP-utilising enzyme, mobile domain ACH33_12105 PF02896 PEP-utilising enzyme, TIM barrel domain ACH33_12115 PF13333 Integrase core domain ACH33_12115 PF00665 Integrase core domain ACH33_12125 PF07261 Replication initiation and membrane attachment ACH33_12135 PF00155 Aminotransferase class I and II ACH33_12140 PF01434 Peptidase family M41 ACH33_12140 PF17862 AAA+ lid domain ACH33_12140 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_12150 PF01385 Probable transposase ACH33_12150 PF07282 Putative transposase DNA-binding domain ACH33_12150 PF12323 Helix-turn-helix domain ACH33_12165 PF01979 Amidohydrolase family ACH33_12170 PF02629 CoA binding domain ACH33_12170 PF06971 Putative DNA-binding protein N-terminus ACH33_12175 PF00929 Exonuclease ACH33_12175 PF04851 Type III restriction enzyme, res subunit ACH33_12175 PF13307 Helicase C-terminal domain ACH33_12185 PF02261 Aspartate decarboxylase ACH33_12190 PF02569 Pantoate-beta-alanine ligase ACH33_12195 PF02548 Ketopantoate hydroxymethyltransferase ACH33_12200 PF08279 HTH domain ACH33_12200 PF03099 Biotin/lipoate A/B protein ligase family ACH33_12200 PF02237 Biotin protein ligase C terminal domain ACH33_12205 PF13735 tRNA nucleotidyltransferase domain 2 putative ACH33_12205 PF12627 Probable RNA and SrmB- binding site of polymerase A ACH33_12205 PF01743 Poly A polymerase head domain ACH33_12210 PF00534 Glycosyl transferases group 1 ACH33_12210 PF13439 Glycosyltransferase Family 4 ACH33_12215 PF02585 GlcNAc-PI de-N-acetylase ACH33_12220 PF02142 MGS-like domain ACH33_12225 PF05173 Dihydrodipicolinate reductase, C-terminus ACH33_12225 PF01113 Dihydrodipicolinate reductase, N-terminus ACH33_12230 PF03819 MazG nucleotide pyrophosphohydrolase domain ACH33_12235 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ACH33_12235 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACH33_12255 PF00033 Cytochrome b/b6/petB ACH33_12260 PF00355 Rieske [2Fe-2S] domain ACH33_12290 PF04542 Sigma-70 region 2 ACH33_12290 PF08281 Sigma-70, region 4 ACH33_12310 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ACH33_12315 PF02153 Prephenate dehydrogenase ACH33_12315 PF01842 ACT domain ACH33_12320 PF00155 Aminotransferase class I and II ACH33_12325 PF00290 Tryptophan synthase alpha chain ACH33_12330 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_12335 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ACH33_12340 PF00218 Indole-3-glycerol phosphate synthase ACH33_12345 PF02885 Glycosyl transferase family, helical bundle domain ACH33_12345 PF00591 Glycosyl transferase family, a/b domain ACH33_12360 PF07736 Chorismate mutase type I ACH33_12365 PF01761 3-dehydroquinate synthase ACH33_12370 PF01264 Chorismate synthase ACH33_12375 PF03705 CheR methyltransferase, all-alpha domain ACH33_12375 PF01739 CheR methyltransferase, SAM binding domain ACH33_12380 PF00334 Nucleoside diphosphate kinase ACH33_12385 PF00348 Polyprenyl synthetase ACH33_12400 PF01040 UbiA prenyltransferase family ACH33_12405 PF01209 ubiE/COQ5 methyltransferase family ACH33_12410 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 ACH33_12415 PF02081 Tryptophan RNA-binding attenuator protein ACH33_12420 PF00216 Bacterial DNA-binding protein ACH33_12430 PF09547 Stage IV sporulation protein A (spore_IV_A) ACH33_12460 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ACH33_12460 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ACH33_12465 PF02660 Glycerol-3-phosphate acyltransferase ACH33_12470 PF01926 50S ribosome-binding GTPase ACH33_12470 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ACH33_12480 PF14045 YIEGIA protein ACH33_12490 PF01070 FMN-dependent dehydrogenase ACH33_12495 PF00575 S1 RNA binding domain ACH33_12500 PF01553 Acyltransferase ACH33_12505 PF02224 Cytidylate kinase ACH33_12515 PF03413 Peptidase propeptide and YPEB domain ACH33_12515 PF14620 YpeB sporulation ACH33_12520 PF13367 PrsW family intramembrane metalloprotease ACH33_12530 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACH33_12530 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACH33_12535 PF00391 PEP-utilising enzyme, mobile domain ACH33_12535 PF02896 PEP-utilising enzyme, TIM barrel domain ACH33_12535 PF05524 PEP-utilising enzyme, N-terminal ACH33_12540 PF00381 PTS HPr component phosphorylation site ACH33_12545 PF00874 PRD domain ACH33_12545 PF03123 CAT RNA binding domain ACH33_12550 PF00342 Phosphoglucose isomerase ACH33_12555 PF00365 Phosphofructokinase ACH33_12560 PF02378 Phosphotransferase system, EIIC ACH33_12560 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ACH33_12560 PF00367 phosphotransferase system, EIIB ACH33_12565 PF05389 Negative regulator of genetic competence (MecA) ACH33_12570 PF04607 Region found in RelA / SpoT proteins ACH33_12575 PF00561 alpha/beta hydrolase fold ACH33_12580 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_12600 PF00270 DEAD/DEAH box helicase ACH33_12600 PF00271 Helicase conserved C-terminal domain ACH33_12605 PF14493 Helix-turn-helix domain ACH33_12620 PF01544 CorA-like Mg2+ transporter protein ACH33_12630 PF00719 Inorganic pyrophosphatase ACH33_12640 PF01842 ACT domain ACH33_12640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACH33_12640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACH33_12645 PF13419 Haloacid dehalogenase-like hydrolase ACH33_12655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACH33_12660 PF03061 Thioesterase superfamily ACH33_12665 PF18698 Histidine kinase sensor domain ACH33_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_12665 PF00672 HAMP domain ACH33_12665 PF00989 PAS fold ACH33_12665 PF00512 His Kinase A (phospho-acceptor) domain ACH33_12670 PF00072 Response regulator receiver domain ACH33_12670 PF00486 Transcriptional regulatory protein, C terminal ACH33_12680 PF00270 DEAD/DEAH box helicase ACH33_12680 PF00271 Helicase conserved C-terminal domain ACH33_12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_12685 PF00512 His Kinase A (phospho-acceptor) domain ACH33_12685 PF00989 PAS fold ACH33_12685 PF00672 HAMP domain ACH33_12685 PF18698 Histidine kinase sensor domain ACH33_12690 PF00486 Transcriptional regulatory protein, C terminal ACH33_12690 PF00072 Response regulator receiver domain ACH33_12700 PF01578 Cytochrome C assembly protein ACH33_12705 PF05140 ResB-like family ACH33_12710 PF00578 AhpC/TSA family ACH33_12720 PF00849 RNA pseudouridylate synthase ACH33_12720 PF01479 S4 domain ACH33_12725 PF00381 PTS HPr component phosphorylation site ACH33_12730 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ACH33_12740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ACH33_12745 PF01979 Amidohydrolase family ACH33_12750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ACH33_12750 PF00367 phosphotransferase system, EIIB ACH33_12750 PF02378 Phosphotransferase system, EIIC ACH33_12755 PF07670 Nucleoside recognition ACH33_12760 PF07670 Nucleoside recognition ACH33_12765 PF07943 Penicillin-binding protein 5, C-terminal domain ACH33_12765 PF00768 D-alanyl-D-alanine carboxypeptidase ACH33_12770 PF04079 Segregation and condensation complex subunit ScpB ACH33_12775 PF02616 Segregation and condensation protein ScpA ACH33_12780 PF02163 Peptidase family M50 ACH33_12785 PF00885 6,7-dimethyl-8-ribityllumazine synthase ACH33_12790 PF00925 GTP cyclohydrolase II ACH33_12790 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ACH33_12795 PF00677 Lumazine binding domain ACH33_12800 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ACH33_12800 PF01872 RibD C-terminal domain ACH33_12805 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ACH33_12810 PF01266 FAD dependent oxidoreductase ACH33_12815 PF08943 CsiD ACH33_12825 PF00171 Aldehyde dehydrogenase family ACH33_12830 PF00324 Amino acid permease ACH33_12835 PF00202 Aminotransferase class-III ACH33_12840 PF00158 Sigma-54 interaction domain ACH33_12845 PF01230 HIT domain ACH33_12850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ACH33_12850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ACH33_12855 PF14097 Stage V sporulation protein AE1 ACH33_12860 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ACH33_12865 PF07451 Stage V sporulation protein AD (SpoVAD) ACH33_12870 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ACH33_12875 PF13782 Stage V sporulation protein AB ACH33_12880 PF12164 Stage V sporulation protein AA ACH33_12885 PF04542 Sigma-70 region 2 ACH33_12885 PF04545 Sigma-70, region 4 ACH33_12885 PF04539 Sigma-70 region 3 ACH33_12890 PF13581 Histidine kinase-like ATPase domain ACH33_12895 PF01740 STAS domain ACH33_12900 PF00768 D-alanyl-D-alanine carboxypeptidase ACH33_12900 PF07943 Penicillin-binding protein 5, C-terminal domain ACH33_12905 PF00005 ABC transporter ACH33_12905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACH33_12910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ACH33_12910 PF00005 ABC transporter ACH33_12915 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_12915 PF12911 N-terminal TM domain of oligopeptide transport permease C ACH33_12920 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_12925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ACH33_12930 PF01037 Lrp/AsnC ligand binding domain ACH33_12930 PF13404 AsnC-type helix-turn-helix domain ACH33_12935 PF01048 Phosphorylase superfamily ACH33_12940 PF01048 Phosphorylase superfamily ACH33_12945 PF01676 Metalloenzyme superfamily ACH33_12950 PF00589 Phage integrase family ACH33_12950 PF02899 Phage integrase, N-terminal SAM-like domain ACH33_12965 PF01475 Ferric uptake regulator family ACH33_12970 PF01944 Stage II sporulation protein M ACH33_12980 PF00293 NUDIX domain ACH33_12990 PF07687 Peptidase dimerisation domain ACH33_12990 PF01546 Peptidase family M20/M25/M40 ACH33_12995 PF01039 Carboxyl transferase domain ACH33_13010 PF02817 e3 binding domain ACH33_13010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ACH33_13010 PF00364 Biotin-requiring enzyme ACH33_13015 PF02780 Transketolase, C-terminal domain ACH33_13015 PF02779 Transketolase, pyrimidine binding domain ACH33_13020 PF00676 Dehydrogenase E1 component ACH33_13025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ACH33_13025 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_13030 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ACH33_13030 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACH33_13035 PF00158 Sigma-54 interaction domain ACH33_13035 PF02954 Bacterial regulatory protein, Fis family ACH33_13035 PF00989 PAS fold ACH33_13050 PF00535 Glycosyl transferase family 2 ACH33_13060 PF00581 Rhodanese-like domain ACH33_13075 PF00571 CBS domain ACH33_13075 PF01595 Cyclin M transmembrane N-terminal domain ACH33_13075 PF03471 Transporter associated domain ACH33_13080 PF04298 Putative neutral zinc metallopeptidase ACH33_13085 PF13411 MerR HTH family regulatory protein ACH33_13095 PF01975 Survival protein SurE ACH33_13105 PF10502 Signal peptidase, peptidase S26 ACH33_13110 PF00171 Aldehyde dehydrogenase family ACH33_13115 PF07285 Protein of unknown function (DUF1444) ACH33_13130 PF00378 Enoyl-CoA hydratase/isomerase ACH33_13160 PF01865 Protein of unknown function DUF47 ACH33_13165 PF01384 Phosphate transporter family ACH33_13180 PF01152 Bacterial-like globin ACH33_13185 PF01464 Transglycosylase SLT domain ACH33_13190 PF00501 AMP-binding enzyme ACH33_13190 PF13193 AMP-binding enzyme C-terminal domain ACH33_13200 PF01329 Pterin 4 alpha carbinolamine dehydratase ACH33_13205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_13205 PF00989 PAS fold ACH33_13205 PF00512 His Kinase A (phospho-acceptor) domain ACH33_13210 PF00072 Response regulator receiver domain ACH33_13215 PF00512 His Kinase A (phospho-acceptor) domain ACH33_13215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_13215 PF00672 HAMP domain ACH33_13215 PF01627 Hpt domain ACH33_13215 PF00072 Response regulator receiver domain ACH33_13215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ACH33_13220 PF02608 ABC transporter substrate-binding protein PnrA-like ACH33_13225 PF02954 Bacterial regulatory protein, Fis family ACH33_13225 PF00072 Response regulator receiver domain ACH33_13225 PF00158 Sigma-54 interaction domain ACH33_13235 PF16295 Tetracyclin repressor-like, C-terminal domain ACH33_13235 PF00440 Bacterial regulatory proteins, tetR family ACH33_13260 PF06491 Disulphide isomerase ACH33_13265 PF01522 Polysaccharide deacetylase ACH33_13270 PF12679 ABC-2 family transporter protein ACH33_13275 PF00005 ABC transporter ACH33_13285 PF02423 Ornithine cyclodeaminase/mu-crystallin family ACH33_13295 PF01381 Helix-turn-helix ACH33_13300 PF01381 Helix-turn-helix ACH33_13305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACH33_13305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACH33_13305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACH33_13305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACH33_13310 PF00342 Phosphoglucose isomerase ACH33_13315 PF00365 Phosphofructokinase ACH33_13320 PF03070 TENA/THI-4/PQQC family ACH33_13330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_13340 PF07690 Major Facilitator Superfamily ACH33_13350 PF01144 Coenzyme A transferase ACH33_13355 PF01144 Coenzyme A transferase ACH33_13365 PF00158 Sigma-54 interaction domain ACH33_13365 PF00989 PAS fold ACH33_13365 PF02954 Bacterial regulatory protein, Fis family ACH33_13370 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_13370 PF17866 AAA lid domain ACH33_13410 PF14698 Argininosuccinate lyase C-terminal ACH33_13410 PF00206 Lyase ACH33_13410 PF00583 Acetyltransferase (GNAT) family ACH33_13420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ACH33_13430 PF00005 ABC transporter ACH33_13435 PF02653 Branched-chain amino acid transport system / permease component ACH33_13445 PF00849 RNA pseudouridylate synthase ACH33_13450 PF02785 Biotin carboxylase C-terminal domain ACH33_13450 PF00364 Biotin-requiring enzyme ACH33_13450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ACH33_13450 PF00289 Biotin carboxylase, N-terminal domain ACH33_13450 PF00682 HMGL-like ACH33_13450 PF02436 Conserved carboxylase domain ACH33_13455 PF09579 Sporulation protein YtfJ (Spore_YtfJ) ACH33_13470 PF01144 Coenzyme A transferase ACH33_13475 PF01144 Coenzyme A transferase ACH33_13480 PF13193 AMP-binding enzyme C-terminal domain ACH33_13480 PF00501 AMP-binding enzyme ACH33_13485 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_13490 PF03741 Integral membrane protein TerC family ACH33_13495 PF00027 Cyclic nucleotide-binding domain ACH33_13495 PF00325 Bacterial regulatory proteins, crp family ACH33_13510 PF00551 Formyl transferase ACH33_13510 PF01842 ACT domain ACH33_13515 PF01227 GTP cyclohydrolase I ACH33_13525 PF00005 ABC transporter ACH33_13550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACH33_13550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACH33_13555 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ACH33_13570 PF00909 Ammonium Transporter Family ACH33_13580 PF03109 ABC1 family ACH33_13590 PF07681 DoxX ACH33_13605 PF00596 Class II Aldolase and Adducin N-terminal domain ACH33_13610 PF01575 MaoC like domain ACH33_13635 PF00561 alpha/beta hydrolase fold ACH33_13640 PF02926 THUMP domain ACH33_13640 PF02568 Thiamine biosynthesis protein (ThiI) ACH33_13645 PF00266 Aminotransferase class-V ACH33_13660 PF07561 Domain of Unknown Function (DUF1540) ACH33_13665 PF01546 Peptidase family M20/M25/M40 ACH33_13665 PF07687 Peptidase dimerisation domain ACH33_13675 PF00106 short chain dehydrogenase ACH33_13680 PF04070 Domain of unknown function (DUF378) ACH33_13685 PF00255 Glutathione peroxidase ACH33_13690 PF03845 Spore germination protein ACH33_13695 PF08281 Sigma-70, region 4 ACH33_13695 PF04542 Sigma-70 region 2 ACH33_13700 PF11738 Protein of unknown function (DUF3298) ACH33_13700 PF13739 Deacetylase PdaC ACH33_13715 PF01012 Electron transfer flavoprotein domain ACH33_13715 PF00766 Electron transfer flavoprotein FAD-binding domain ACH33_13720 PF01012 Electron transfer flavoprotein domain ACH33_13740 PF04341 Protein of unknown function, DUF485 ACH33_13745 PF00474 Sodium:solute symporter family ACH33_13750 PF06160 Septation ring formation regulator, EzrA ACH33_13755 PF00440 Bacterial regulatory proteins, tetR family ACH33_13765 PF00753 Metallo-beta-lactamase superfamily ACH33_13770 PF00990 Diguanylate cyclase, GGDEF domain ACH33_13780 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_13790 PF01479 S4 domain ACH33_13790 PF00163 Ribosomal protein S4/S9 N-terminal domain ACH33_13795 PF00579 tRNA synthetases class I (W and Y) ACH33_13795 PF01479 S4 domain ACH33_13800 PF00905 Penicillin binding protein transpeptidase domain ACH33_13800 PF00912 Transglycosylase ACH33_13805 PF13193 AMP-binding enzyme C-terminal domain ACH33_13805 PF00501 AMP-binding enzyme ACH33_13810 PF00583 Acetyltransferase (GNAT) family ACH33_13815 PF00571 CBS domain ACH33_13820 PF00850 Histone deacetylase domain ACH33_13825 PF01048 Phosphorylase superfamily ACH33_13830 PF00356 Bacterial regulatory proteins, lacI family ACH33_13840 PF00793 DAHP synthetase I family ACH33_13840 PF01817 Chorismate mutase type II ACH33_13845 PF02491 SHS2 domain inserted in FTSA ACH33_13850 PF11009 Protein of unknown function (DUF2847) ACH33_13865 PF00180 Isocitrate/isopropylmalate dehydrogenase ACH33_13885 PF13180 PDZ domain ACH33_13890 PF16658 Class II release factor RF3, C-terminal domain ACH33_13890 PF03144 Elongation factor Tu domain 2 ACH33_13890 PF00009 Elongation factor Tu GTP binding domain ACH33_13900 PF00571 CBS domain ACH33_13920 PF11007 Spore coat associated protein JA (CotJA) ACH33_13925 PF12652 CotJB protein ACH33_13930 PF05067 Manganese containing catalase ACH33_13935 PF00881 Nitroreductase family ACH33_13940 PF03838 Recombination protein U ACH33_13950 PF07992 Pyridine nucleotide-disulphide oxidoreductase ACH33_14045 PF00768 D-alanyl-D-alanine carboxypeptidase ACH33_14045 PF07943 Penicillin-binding protein 5, C-terminal domain ACH33_14060 PF00005 ABC transporter ACH33_14065 PF00005 ABC transporter ACH33_14065 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACH33_14075 PF02653 Branched-chain amino acid transport system / permease component ACH33_14080 PF13458 Periplasmic binding protein ACH33_14085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACH33_14090 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ACH33_14090 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ACH33_14095 PF00171 Aldehyde dehydrogenase family ACH33_14100 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACH33_14105 PF00701 Dihydrodipicolinate synthetase family ACH33_14110 PF00392 Bacterial regulatory proteins, gntR family ACH33_14115 PF01967 MoaC family ACH33_14120 PF04055 Radical SAM superfamily ACH33_14120 PF06463 Molybdenum Cofactor Synthesis C ACH33_14125 PF00892 EamA-like transporter family ACH33_14130 PF05373 L-proline 3-hydroxylase, C-terminal ACH33_14130 PF05118 Aspartyl/Asparaginyl beta-hydroxylase ACH33_14135 PF00899 ThiF family ACH33_14145 PF01580 FtsK/SpoIIIE family ACH33_14145 PF09397 Ftsk gamma domain ACH33_14145 PF17854 FtsK alpha domain ACH33_14160 PF03169 OPT oligopeptide transporter protein ACH33_14165 PF00920 Dehydratase family ACH33_14170 PF03734 L,D-transpeptidase catalytic domain ACH33_14170 PF01476 LysM domain ACH33_14175 PF00196 Bacterial regulatory proteins, luxR family ACH33_14175 PF00072 Response regulator receiver domain ACH33_14180 PF00672 HAMP domain ACH33_14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_14180 PF07730 Histidine kinase ACH33_14185 PF09922 Cell wall-active antibiotics response 4TMS YvqF ACH33_14195 PF00849 RNA pseudouridylate synthase ACH33_14195 PF01479 S4 domain ACH33_14200 PF01189 16S rRNA methyltransferase RsmB/F ACH33_14200 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ACH33_14200 PF17126 RsmF rRNA methyltransferase first C-terminal domain ACH33_14210 PF00905 Penicillin binding protein transpeptidase domain ACH33_14210 PF00912 Transglycosylase ACH33_14220 PF14489 QueF-like protein ACH33_14225 PF06508 Queuosine biosynthesis protein QueC ACH33_14230 PF04055 Radical SAM superfamily ACH33_14235 PF01242 6-pyruvoyl tetrahydropterin synthase ACH33_14240 PF00459 Inositol monophosphatase family ACH33_14245 PF13649 Methyltransferase domain ACH33_14260 PF03741 Integral membrane protein TerC family ACH33_14270 PF02581 Thiamine monophosphate synthase ACH33_14275 PF01266 FAD dependent oxidoreductase ACH33_14280 PF02597 ThiS family ACH33_14285 PF05690 Thiazole biosynthesis protein ThiG ACH33_14295 PF01869 BadF/BadG/BcrA/BcrD ATPase family ACH33_14300 PF00682 HMGL-like ACH33_14300 PF08502 LeuA allosteric (dimerisation) domain ACH33_14315 PF07690 Major Facilitator Superfamily ACH33_14320 PF02416 mttA/Hcf106 family ACH33_14325 PF00149 Calcineurin-like phosphoesterase ACH33_14325 PF10518 TAT (twin-arginine translocation) pathway signal sequence ACH33_14340 PF16199 Radical_SAM C-terminal domain ACH33_14340 PF04055 Radical SAM superfamily ACH33_14345 PF04284 Protein of unknown function (DUF441) ACH33_14355 PF03816 Cell envelope-related transcriptional attenuator domain ACH33_14360 PF12146 Serine aminopeptidase, S33 ACH33_14370 PF01293 Phosphoenolpyruvate carboxykinase ACH33_14395 PF13183 4Fe-4S dicluster domain ACH33_14395 PF11870 Domain of unknown function (DUF3390) ACH33_14395 PF02589 LUD domain ACH33_14400 PF02754 Cysteine-rich domain ACH33_14420 PF18427 DD-reactivating factor swiveling domain ACH33_14420 PF08841 Diol dehydratase reactivase ATPase-like domain ACH33_14425 PF02287 Dehydratase small subunit ACH33_14430 PF02288 Dehydratase medium subunit ACH33_14440 PF12833 Helix-turn-helix domain ACH33_14440 PF02311 AraC-like ligand binding domain ACH33_14450 PF00465 Iron-containing alcohol dehydrogenase ACH33_14455 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACH33_14460 PF00106 short chain dehydrogenase ACH33_14465 PF04951 D-aminopeptidase ACH33_14470 PF00501 AMP-binding enzyme ACH33_14470 PF13193 AMP-binding enzyme C-terminal domain ACH33_14475 PF03180 NLPA lipoprotein ACH33_14480 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_14485 PF00005 ABC transporter ACH33_14485 PF09383 NIL domain ACH33_14515 PF13407 Periplasmic binding protein domain ACH33_14520 PF02653 Branched-chain amino acid transport system / permease component ACH33_14525 PF00005 ABC transporter ACH33_14530 PF05025 RbsD / FucU transport protein family ACH33_14535 PF00294 pfkB family carbohydrate kinase ACH33_14540 PF00356 Bacterial regulatory proteins, lacI family ACH33_14560 PF02666 Phosphatidylserine decarboxylase ACH33_14565 PF11066 Protein of unknown function (DUF2867) ACH33_14565 PF13460 NAD(P)H-binding ACH33_14590 PF13358 DDE superfamily endonuclease ACH33_14600 PF13380 CoA binding domain ACH33_14610 PF00453 Ribosomal protein L20 ACH33_14615 PF01632 Ribosomal protein L35 ACH33_14620 PF00707 Translation initiation factor IF-3, C-terminal domain ACH33_14620 PF05198 Translation initiation factor IF-3, N-terminal domain ACH33_14625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_14625 PF02743 Cache domain ACH33_14625 PF00672 HAMP domain ACH33_14630 PF02824 TGS domain ACH33_14630 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ACH33_14630 PF03129 Anticodon binding domain ACH33_14630 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ACH33_14640 PF04055 Radical SAM superfamily ACH33_14645 PF07319 Primosomal protein DnaI N-terminus ACH33_14645 PF01695 IstB-like ATP binding protein ACH33_14650 PF07261 Replication initiation and membrane attachment ACH33_14655 PF03477 ATP cone domain ACH33_14660 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACH33_14660 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ACH33_14665 PF01551 Peptidase family M23 ACH33_14665 PF10145 Phage-related minor tail protein ACH33_14665 PF01464 Transglycosylase SLT domain ACH33_14670 PF01121 Dephospho-CoA kinase ACH33_14675 PF02659 Putative manganese efflux pump ACH33_14680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ACH33_14680 PF06827 Zinc finger found in FPG and IleRS ACH33_14680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ACH33_14685 PF01367 5'-3' exonuclease, C-terminal SAM fold ACH33_14685 PF00476 DNA polymerase family A ACH33_14685 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ACH33_14690 PF01145 SPFH domain / Band 7 family ACH33_14700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_14700 PF00512 His Kinase A (phospho-acceptor) domain ACH33_14700 PF00989 PAS fold ACH33_14700 PF16736 Single Cache-like ACH33_14705 PF00072 Response regulator receiver domain ACH33_14705 PF00486 Transcriptional regulatory protein, C terminal ACH33_14725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ACH33_14725 PF00056 lactate/malate dehydrogenase, NAD binding domain ACH33_14730 PF00180 Isocitrate/isopropylmalate dehydrogenase ACH33_14735 PF00285 Citrate synthase, C-terminal domain ACH33_14745 PF01594 AI-2E family transporter ACH33_14750 PF04186 FxsA cytoplasmic membrane protein ACH33_14755 PF03061 Thioesterase superfamily ACH33_14760 PF02887 Pyruvate kinase, alpha/beta domain ACH33_14760 PF00391 PEP-utilising enzyme, mobile domain ACH33_14760 PF00224 Pyruvate kinase, barrel domain ACH33_14765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ACH33_14770 PF01039 Carboxyl transferase domain ACH33_14770 PF17848 Acetyl-coA carboxylase zinc finger domain ACH33_14780 PF00392 Bacterial regulatory proteins, gntR family ACH33_14780 PF07729 FCD domain ACH33_14785 PF00390 Malic enzyme, N-terminal domain ACH33_14785 PF03949 Malic enzyme, NAD binding domain ACH33_14790 PF07733 Bacterial DNA polymerase III alpha NTPase domain ACH33_14790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ACH33_14790 PF14579 Helix-hairpin-helix motif ACH33_14790 PF01336 OB-fold nucleic acid binding domain ACH33_14790 PF02811 PHP domain ACH33_14795 PF14034 Sporulation protein YtrH ACH33_14815 PF00392 Bacterial regulatory proteins, gntR family ACH33_14815 PF03061 Thioesterase superfamily ACH33_14815 PF00571 CBS domain ACH33_14815 PF07085 DRTGG domain ACH33_14825 PF02390 Putative methyltransferase ACH33_14830 PF01272 Transcription elongation factor, GreA/GreB, C-term ACH33_14830 PF03449 Transcription elongation factor, N-terminal ACH33_14840 PF14398 YheC/D like ATP-grasp ACH33_14845 PF14398 YheC/D like ATP-grasp ACH33_14850 PF14398 YheC/D like ATP-grasp ACH33_14875 PF00155 Aminotransferase class I and II ACH33_14880 PF04463 Protein of unknown function (DUF523) ACH33_14885 PF02583 Metal-sensitive transcriptional repressor ACH33_14890 PF00067 Cytochrome P450 ACH33_14895 PF17954 Quercetinase C-terminal cupin domain ACH33_14895 PF02678 Pirin ACH33_14915 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ACH33_14925 PF04293 SpoVR like protein ACH33_14940 PF13358 DDE superfamily endonuclease ACH33_14950 PF13539 D-alanyl-D-alanine carboxypeptidase ACH33_14955 PF05105 Bacteriophage holin family ACH33_15040 PF04883 Bacteriophage HK97-gp10, putative tail-component ACH33_15120 PF06798 PrkA serine protein kinase C-terminal domain ACH33_15120 PF08298 PrkA AAA domain ACH33_15130 PF03180 NLPA lipoprotein ACH33_15140 PF00588 SpoU rRNA Methylase family ACH33_15145 PF06271 RDD family ACH33_15150 PF01343 Peptidase family S49 ACH33_15155 PF12671 Putative amidase domain ACH33_15160 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ACH33_15160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ACH33_15165 PF08331 Domain of unknown function (DUF1730) ACH33_15170 PF00075 RNase H ACH33_15180 PF00860 Permease family ACH33_15185 PF03167 Uracil DNA glycosylase superfamily ACH33_15190 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_15195 PF03167 Uracil DNA glycosylase superfamily ACH33_15300 PF11023 Zinc-ribbon containing domain ACH33_15305 PF01475 Ferric uptake regulator family ACH33_15345 PF01923 Cobalamin adenosyltransferase ACH33_15350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ACH33_15350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ACH33_15355 PF13649 Methyltransferase domain ACH33_15360 PF00578 AhpC/TSA family ACH33_15380 PF10612 Spore coat protein Z ACH33_15390 PF00005 ABC transporter ACH33_15395 PF00202 Aminotransferase class-III ACH33_15400 PF00310 Glutamine amidotransferases class-II ACH33_15400 PF04898 Glutamate synthase central domain ACH33_15400 PF01493 GXGXG motif ACH33_15400 PF01645 Conserved region in glutamate synthase ACH33_15405 PF06081 Aromatic acid exporter family member 1 ACH33_15410 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain ACH33_15410 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain ACH33_15420 PF00596 Class II Aldolase and Adducin N-terminal domain ACH33_15425 PF03079 ARD/ARD' family ACH33_15430 PF02525 Flavodoxin-like fold ACH33_15435 PF00664 ABC transporter transmembrane region ACH33_15435 PF00005 ABC transporter ACH33_15440 PF04167 Protein of unknown function (DUF402) ACH33_15445 PF00583 Acetyltransferase (GNAT) family ACH33_15460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ACH33_15460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ACH33_15465 PF01027 Inhibitor of apoptosis-promoting Bax1 ACH33_15470 PF07690 Major Facilitator Superfamily ACH33_15475 PF13183 4Fe-4S dicluster domain ACH33_15475 PF02754 Cysteine-rich domain ACH33_15480 PF01565 FAD binding domain ACH33_15480 PF02913 FAD linked oxidases, C-terminal domain ACH33_15485 PF00633 Helix-hairpin-helix motif ACH33_15485 PF00730 HhH-GPD superfamily base excision DNA repair protein ACH33_15485 PF14815 NUDIX domain ACH33_15495 PF04307 LexA-binding, inner membrane-associated putative hydrolase ACH33_15505 PF00188 Cysteine-rich secretory protein family ACH33_15510 PF02525 Flavodoxin-like fold ACH33_15515 PF01554 MatE ACH33_15530 PF14306 PUA-like domain ACH33_15530 PF01747 ATP-sulfurylase ACH33_15535 PF01507 Phosphoadenosine phosphosulfate reductase family ACH33_15540 PF01384 Phosphate transporter family ACH33_15550 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ACH33_15550 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ACH33_15555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_15560 PF02687 FtsX-like permease family ACH33_15560 PF12704 MacB-like periplasmic core domain ACH33_15565 PF00005 ABC transporter ACH33_15575 PF00202 Aminotransferase class-III ACH33_15580 PF00171 Aldehyde dehydrogenase family ACH33_15585 PF00158 Sigma-54 interaction domain ACH33_15585 PF00989 PAS fold ACH33_15585 PF02954 Bacterial regulatory protein, Fis family ACH33_15605 PF03323 Bacillus/Clostridium GerA spore germination protein ACH33_15610 PF03845 Spore germination protein ACH33_15620 PF02595 Glycerate kinase family ACH33_15625 PF03600 Citrate transporter ACH33_15635 PF01066 CDP-alcohol phosphatidyltransferase ACH33_15640 PF00324 Amino acid permease ACH33_15645 PF02770 Acyl-CoA dehydrogenase, middle domain ACH33_15645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ACH33_15645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ACH33_15650 PF02515 CoA-transferase family III ACH33_15665 PF00512 His Kinase A (phospho-acceptor) domain ACH33_15665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_15675 PF13649 Methyltransferase domain ACH33_15680 PF03848 Tellurite resistance protein TehB ACH33_15680 PF09313 Domain of unknown function (DUF1971) ACH33_15695 PF01810 LysE type translocator ACH33_15715 PF13333 Integrase core domain ACH33_15715 PF00665 Integrase core domain ACH33_15730 PF13358 DDE superfamily endonuclease ACH33_15735 PF13408 Recombinase zinc beta ribbon domain ACH33_15735 PF07508 Recombinase ACH33_15740 PF02810 SEC-C motif ACH33_15740 PF07517 SecA DEAD-like domain ACH33_15740 PF07516 SecA Wing and Scaffold domain ACH33_15740 PF01043 SecA preprotein cross-linking domain ACH33_15755 PF00239 Resolvase, N terminal domain ACH33_15785 PF01938 TRAM domain ACH33_15785 PF05958 tRNA (Uracil-5-)-methyltransferase ACH33_15800 PF16916 Dimerisation domain of Zinc Transporter ACH33_15800 PF01545 Cation efflux family ACH33_15810 PF02673 Bacitracin resistance protein BacA ACH33_15815 PF00581 Rhodanese-like domain ACH33_15820 PF06569 Protein of unknown function (DUF1128) ACH33_15825 PF00209 Sodium:neurotransmitter symporter family ACH33_15830 PF00085 Thioredoxin ACH33_15835 PF00011 Hsp20/alpha crystallin family ACH33_15840 PF00209 Sodium:neurotransmitter symporter family ACH33_15845 PF01544 CorA-like Mg2+ transporter protein ACH33_15860 PF04239 Protein of unknown function (DUF421) ACH33_15870 PF00005 ABC transporter ACH33_15875 PF00664 ABC transporter transmembrane region ACH33_15875 PF00005 ABC transporter ACH33_15880 PF13186 Iron-sulfur cluster-binding domain ACH33_15880 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ACH33_15880 PF04055 Radical SAM superfamily ACH33_15885 PF07681 DoxX ACH33_15905 PF00375 Sodium:dicarboxylate symporter family ACH33_15910 PF00324 Amino acid permease ACH33_15920 PF01048 Phosphorylase superfamily ACH33_15925 PF02621 Menaquinone biosynthesis ACH33_15950 PF09827 CRISPR associated protein Cas2 ACH33_15955 PF01867 CRISPR associated protein Cas1 ACH33_15965 PF00270 DEAD/DEAH box helicase ACH33_15965 PF00271 Helicase conserved C-terminal domain ACH33_15965 PF18019 HD domain ACH33_15990 PF00854 POT family ACH33_16020 PF03611 PTS system sugar-specific permease component ACH33_16025 PF02796 Helix-turn-helix domain of resolvase ACH33_16025 PF00665 Integrase core domain ACH33_16030 PF01695 IstB-like ATP binding protein ACH33_16035 PF04851 Type III restriction enzyme, res subunit ACH33_16035 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ACH33_16035 PF00271 Helicase conserved C-terminal domain ACH33_16035 PF08463 EcoEI R protein C-terminal ACH33_16040 PF01420 Type I restriction modification DNA specificity domain ACH33_16045 PF02384 N-6 DNA Methylase ACH33_16055 PF00672 HAMP domain ACH33_16055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_16055 PF13426 PAS domain ACH33_16055 PF00512 His Kinase A (phospho-acceptor) domain ACH33_16060 PF00072 Response regulator receiver domain ACH33_16060 PF00486 Transcriptional regulatory protein, C terminal ACH33_16065 PF05147 Lanthionine synthetase C-like protein ACH33_16070 PF00005 ABC transporter ACH33_16075 PF04738 Lantibiotic dehydratase, N terminus ACH33_16075 PF14028 Lantibiotic biosynthesis dehydratase C-term ACH33_16095 PF00005 ABC transporter ACH33_16100 PF01938 TRAM domain ACH33_16100 PF05958 tRNA (Uracil-5-)-methyltransferase ACH33_16105 PF00781 Diacylglycerol kinase catalytic domain ACH33_16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_16110 PF00512 His Kinase A (phospho-acceptor) domain ACH33_16110 PF00989 PAS fold ACH33_16115 PF01381 Helix-turn-helix ACH33_16120 PF13183 4Fe-4S dicluster domain ACH33_16120 PF02754 Cysteine-rich domain ACH33_16125 PF02913 FAD linked oxidases, C-terminal domain ACH33_16125 PF01565 FAD binding domain ACH33_16130 PF07729 FCD domain ACH33_16130 PF00392 Bacterial regulatory proteins, gntR family ACH33_16135 PF00762 Ferrochelatase ACH33_16140 PF00990 Diguanylate cyclase, GGDEF domain ACH33_16145 PF00589 Phage integrase family ACH33_16155 PF02934 GatB/GatE catalytic domain ACH33_16155 PF02637 GatB domain ACH33_16160 PF01425 Amidase ACH33_16165 PF02686 Glu-tRNAGln amidotransferase C subunit ACH33_16170 PF00672 HAMP domain ACH33_16170 PF02743 Cache domain ACH33_16170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_16175 PF00491 Arginase family ACH33_16180 PF00158 Sigma-54 interaction domain ACH33_16185 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ACH33_16185 PF12826 Helix-hairpin-helix motif ACH33_16185 PF03120 NAD-dependent DNA ligase OB-fold domain ACH33_16185 PF01653 NAD-dependent DNA ligase adenylation domain ACH33_16185 PF00533 BRCA1 C Terminus (BRCT) domain ACH33_16190 PF00580 UvrD/REP helicase N-terminal domain ACH33_16190 PF13361 UvrD-like helicase C-terminal domain ACH33_16205 PF00005 ABC transporter ACH33_16220 PF01884 PcrB family ACH33_16225 PF01371 Trp repressor protein ACH33_16230 PF12323 Helix-turn-helix domain ACH33_16230 PF01385 Probable transposase ACH33_16230 PF07282 Putative transposase DNA-binding domain ACH33_16235 PF02743 Cache domain ACH33_16235 PF00672 HAMP domain ACH33_16235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_16240 PF11258 Protein of unknown function (DUF3048) N-terminal domain ACH33_16240 PF17479 Protein of unknown function (DUF3048) C-terminal domain ACH33_16245 PF00005 ABC transporter ACH33_16250 PF12399 Branched-chain amino acid ATP-binding cassette transporter ACH33_16250 PF00005 ABC transporter ACH33_16255 PF02653 Branched-chain amino acid transport system / permease component ACH33_16255 PF11862 Domain of unknown function (DUF3382) ACH33_16260 PF02653 Branched-chain amino acid transport system / permease component ACH33_16265 PF13458 Periplasmic binding protein ACH33_16275 PF02843 Phosphoribosylglycinamide synthetase, C domain ACH33_16275 PF02844 Phosphoribosylglycinamide synthetase, N domain ACH33_16275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ACH33_16280 PF02142 MGS-like domain ACH33_16280 PF01808 AICARFT/IMPCHase bienzyme ACH33_16285 PF00551 Formyl transferase ACH33_16290 PF02769 AIR synthase related protein, C-terminal domain ACH33_16290 PF00586 AIR synthase related protein, N-terminal domain ACH33_16295 PF00156 Phosphoribosyl transferase domain ACH33_16300 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ACH33_16300 PF02769 AIR synthase related protein, C-terminal domain ACH33_16300 PF00586 AIR synthase related protein, N-terminal domain ACH33_16310 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ACH33_16315 PF01259 SAICAR synthetase ACH33_16320 PF00206 Lyase ACH33_16320 PF10397 Adenylosuccinate lyase C-terminus ACH33_16325 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ACH33_16325 PF02222 ATP-grasp domain ACH33_16330 PF00731 AIR carboxylase ACH33_16335 PF00072 Response regulator receiver domain ACH33_16340 PF00860 Permease family ACH33_16345 PF00958 GMP synthase C terminal domain ACH33_16345 PF02540 NAD synthase ACH33_16345 PF00117 Glutamine amidotransferase class-I ACH33_16355 PF00166 Chaperonin 10 Kd subunit ACH33_16360 PF00902 Sec-independent protein translocase protein (TatC) ACH33_16365 PF00994 Probable molybdopterin binding domain ACH33_16370 PF01812 5-formyltetrahydrofolate cyclo-ligase family ACH33_16375 PF16326 ABC transporter C-terminal domain ACH33_16375 PF12848 ABC transporter ACH33_16375 PF00005 ABC transporter ACH33_16385 PF00814 Glycoprotease family ACH33_16390 PF00583 Acetyltransferase (GNAT) family ACH33_16395 PF00814 Glycoprotease family ACH33_16400 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ACH33_16405 PF00586 AIR synthase related protein, N-terminal domain ACH33_16405 PF02769 AIR synthase related protein, C-terminal domain ACH33_16410 PF17283 SprT-like zinc ribbon domain ACH33_16410 PF10263 SprT-like family ACH33_16420 PF09371 Tex-like protein N-terminal domain ACH33_16420 PF16921 Tex protein YqgF-like domain ACH33_16420 PF17674 HHH domain ACH33_16420 PF00575 S1 RNA binding domain ACH33_16425 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ACH33_16430 PF01402 Ribbon-helix-helix protein, copG family ACH33_16435 PF01168 Alanine racemase, N-terminal domain ACH33_16435 PF00842 Alanine racemase, C-terminal domain ACH33_16550 PF03853 YjeF-related protein N-terminus ACH33_16550 PF01256 Carbohydrate kinase ACH33_16555 PF01648 4'-phosphopantetheinyl transferase superfamily ACH33_16560 PF01520 N-acetylmuramoyl-L-alanine amidase ACH33_16565 PF02322 Cytochrome bd terminal oxidase subunit II ACH33_16570 PF00691 OmpA family ACH33_16570 PF13677 Membrane MotB of proton-channel complex MotA/MotB ACH33_16575 PF01618 MotA/TolQ/ExbB proton channel family ACH33_16580 PF00583 Acetyltransferase (GNAT) family ACH33_16590 PF00268 Ribonucleotide reductase, small chain ACH33_16595 PF02867 Ribonucleotide reductase, barrel domain ACH33_16595 PF03477 ATP cone domain ACH33_16595 PF00317 Ribonucleotide reductase, all-alpha domain ACH33_16600 PF09335 SNARE associated Golgi protein ACH33_16605 PF03816 Cell envelope-related transcriptional attenuator domain ACH33_16620 PF00535 Glycosyl transferase family 2 ACH33_16625 PF02683 Cytochrome C biogenesis protein transmembrane region ACH33_16630 PF04397 LytTr DNA-binding domain ACH33_16630 PF00072 Response regulator receiver domain ACH33_16635 PF04647 Accessory gene regulator B ACH33_16650 PF01546 Peptidase family M20/M25/M40 ACH33_16650 PF07687 Peptidase dimerisation domain ACH33_16655 PF01144 Coenzyme A transferase ACH33_16660 PF01144 Coenzyme A transferase ACH33_16665 PF00202 Aminotransferase class-III ACH33_16670 PF06018 CodY GAF-like domain ACH33_16670 PF17853 GGDEF-like domain ACH33_16670 PF13556 PucR C-terminal helix-turn-helix domain ACH33_16680 PF02954 Bacterial regulatory protein, Fis family ACH33_16680 PF00158 Sigma-54 interaction domain ACH33_16680 PF13426 PAS domain ACH33_16685 PF12544 Lysine-2,3-aminomutase ACH33_16695 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ACH33_16700 PF07451 Stage V sporulation protein AD (SpoVAD) ACH33_16705 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ACH33_16715 PF04239 Protein of unknown function (DUF421) ACH33_16720 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_16720 PF17871 AAA lid domain ACH33_16720 PF07724 AAA domain (Cdc48 subfamily) ACH33_16720 PF10431 C-terminal, D2-small domain, of ClpB protein ACH33_16720 PF02861 Clp amino terminal domain, pathogenicity island component ACH33_16725 PF00011 Hsp20/alpha crystallin family ACH33_16730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ACH33_16730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ACH33_16735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_16735 PF17200 Single Cache domain 2 ACH33_16735 PF00672 HAMP domain ACH33_16785 PF01548 Transposase ACH33_16785 PF02371 Transposase IS116/IS110/IS902 family ACH33_16805 PF13358 DDE superfamily endonuclease ACH33_16840 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_16865 PF13539 D-alanyl-D-alanine carboxypeptidase ACH33_16870 PF05105 Bacteriophage holin family ACH33_16915 PF01695 IstB-like ATP binding protein ACH33_16955 PF01381 Helix-turn-helix ACH33_16960 PF01475 Ferric uptake regulator family ACH33_16965 PF00950 ABC 3 transport family ACH33_16970 PF00005 ABC transporter ACH33_16975 PF01297 Zinc-uptake complex component A periplasmic ACH33_16985 PF02421 Ferrous iron transport protein B ACH33_16985 PF07664 Ferrous iron transport protein B C terminus ACH33_16985 PF07670 Nucleoside recognition ACH33_16985 PF17910 FeoB cytosolic helical domain ACH33_16990 PF07670 Nucleoside recognition ACH33_16990 PF07664 Ferrous iron transport protein B C terminus ACH33_16990 PF17910 FeoB cytosolic helical domain ACH33_16990 PF02421 Ferrous iron transport protein B ACH33_17010 PF00005 ABC transporter ACH33_17020 PF08281 Sigma-70, region 4 ACH33_17020 PF04542 Sigma-70 region 2 ACH33_17030 PF00392 Bacterial regulatory proteins, gntR family ACH33_17030 PF00155 Aminotransferase class I and II ACH33_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_17035 PF00512 His Kinase A (phospho-acceptor) domain ACH33_17040 PF00072 Response regulator receiver domain ACH33_17040 PF00486 Transcriptional regulatory protein, C terminal ACH33_17050 PF00989 PAS fold ACH33_17050 PF02954 Bacterial regulatory protein, Fis family ACH33_17050 PF00158 Sigma-54 interaction domain ACH33_17060 PF00202 Aminotransferase class-III ACH33_17075 PF02416 mttA/Hcf106 family ACH33_17100 PF07690 Major Facilitator Superfamily ACH33_17105 PF00324 Amino acid permease ACH33_17110 PF00491 Arginase family ACH33_17115 PF07849 Protein of unknown function (DUF1641) ACH33_17120 PF12838 4Fe-4S dicluster domain ACH33_17120 PF01568 Molydopterin dinucleotide binding domain ACH33_17120 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACH33_17120 PF00384 Molybdopterin oxidoreductase ACH33_17120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ACH33_17125 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACH33_17125 PF13378 Enolase C-terminal domain-like ACH33_17140 PF02634 FdhD/NarQ family ACH33_17145 PF13537 Glutamine amidotransferase domain ACH33_17145 PF00733 Asparagine synthase ACH33_17255 PF04308 Ribonuclease H-like ACH33_17260 PF00378 Enoyl-CoA hydratase/isomerase ACH33_17265 PF01235 Sodium:alanine symporter family ACH33_17270 PF00484 Carbonic anhydrase ACH33_17280 PF00578 AhpC/TSA family ACH33_17280 PF10417 C-terminal domain of 1-Cys peroxiredoxin ACH33_17300 PF02673 Bacitracin resistance protein BacA ACH33_17310 PF00005 ABC transporter ACH33_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ACH33_17315 PF00512 His Kinase A (phospho-acceptor) domain ACH33_17320 PF00072 Response regulator receiver domain ACH33_17320 PF00486 Transcriptional regulatory protein, C terminal ACH33_17325 PF01695 IstB-like ATP binding protein ACH33_17335 PF01380 SIS domain ACH33_17340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ACH33_17340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ACH33_17340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ACH33_17340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ACH33_17345 PF07949 YbbR-like protein ACH33_17350 PF02457 DisA bacterial checkpoint controller nucleotide-binding ACH33_17355 PF13490 Putative zinc-finger ACH33_17360 PF04542 Sigma-70 region 2 ACH33_17360 PF08281 Sigma-70, region 4 ACH33_17365 PF00491 Arginase family ACH33_17465 PF01522 Polysaccharide deacetylase ACH33_17470 PF14089 KinB-signalling pathway activation in sporulation ACH33_17475 PF17898 Spore germination GerD central core domain ACH33_17480 PF10609 NUBPL iron-transfer P-loop NTPase ACH33_17485 PF01520 N-acetylmuramoyl-L-alanine amidase ACH33_17495 PF00380 Ribosomal protein S9/S16 ACH33_17500 PF00572 Ribosomal protein L13 ACH33_17505 PF01416 tRNA pseudouridine synthase ACH33_17515 PF00005 ABC transporter ACH33_17520 PF00005 ABC transporter ACH33_17525 PF01196 Ribosomal protein L17 ACH33_17530 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ACH33_17530 PF01000 RNA polymerase Rpb3/RpoA insert domain ACH33_17530 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ACH33_17535 PF00411 Ribosomal protein S11 ACH33_17540 PF00416 Ribosomal protein S13/S18 ACH33_17545 PF00444 Ribosomal protein L36 ACH33_17550 PF01176 Translation initiation factor 1A / IF-1 ACH33_17555 PF00557 Metallopeptidase family M24 ACH33_17560 PF05191 Adenylate kinase, active site lid ACH33_17565 PF00344 SecY translocase ACH33_17570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ACH33_17575 PF00327 Ribosomal protein L30p/L7e ACH33_17580 PF03719 Ribosomal protein S5, C-terminal domain ACH33_17580 PF00333 Ribosomal protein S5, N-terminal domain ACH33_17585 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ACH33_17590 PF00347 Ribosomal protein L6 ACH33_17595 PF00410 Ribosomal protein S8 ACH33_17600 PF00253 Ribosomal protein S14p/S29e ACH33_17605 PF00281 Ribosomal protein L5 ACH33_17605 PF00673 ribosomal L5P family C-terminus ACH33_17610 PF00467 KOW motif ACH33_17610 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ACH33_17615 PF00238 Ribosomal protein L14p/L23e ACH33_17620 PF00366 Ribosomal protein S17 ACH33_17625 PF00831 Ribosomal L29 protein ACH33_17630 PF00252 Ribosomal protein L16p/L10e ACH33_17635 PF07650 KH domain ACH33_17635 PF00189 Ribosomal protein S3, C-terminal domain ACH33_17640 PF00237 Ribosomal protein L22p/L17e ACH33_17645 PF00203 Ribosomal protein S19 ACH33_17650 PF03947 Ribosomal Proteins L2, C-terminal domain ACH33_17650 PF00181 Ribosomal Proteins L2, RNA binding domain ACH33_17655 PF00276 Ribosomal protein L23 ACH33_17660 PF00573 Ribosomal protein L4/L1 family ACH33_17665 PF00297 Ribosomal protein L3 ACH33_17670 PF00338 Ribosomal protein S10p/S20e ACH33_17685 PF05199 GMC oxidoreductase ACH33_17685 PF00732 GMC oxidoreductase ACH33_17690 PF02416 mttA/Hcf106 family ACH33_17700 PF01266 FAD dependent oxidoreductase ACH33_17700 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ACH33_17705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ACH33_17705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ACH33_17710 PF00230 Major intrinsic protein ACH33_17715 PF07690 Major Facilitator Superfamily ACH33_17720 PF04309 Glycerol-3-phosphate responsive antiterminator ACH33_17750 PF08810 Kinase associated protein B ACH33_17770 PF13520 Amino acid permease ACH33_17785 PF00155 Aminotransferase class I and II ACH33_17790 PF01557 Fumarylacetoacetate (FAA) hydrolase family ACH33_17795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ACH33_17850 PF01895 PhoU domain ACH33_17855 PF01098 Cell cycle protein ACH33_17860 PF03143 Elongation factor Tu C-terminal domain ACH33_17860 PF00009 Elongation factor Tu GTP binding domain ACH33_17860 PF03144 Elongation factor Tu domain 2 ACH33_17865 PF03144 Elongation factor Tu domain 2 ACH33_17865 PF00009 Elongation factor Tu GTP binding domain ACH33_17865 PF14492 Elongation Factor G, domain II ACH33_17865 PF00679 Elongation factor G C-terminus ACH33_17865 PF03764 Elongation factor G, domain IV ACH33_17870 PF00177 Ribosomal protein S7p/S5e ACH33_17875 PF00164 Ribosomal protein S12/S23 ACH33_17880 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ACH33_17885 PF04997 RNA polymerase Rpb1, domain 1 ACH33_17885 PF00623 RNA polymerase Rpb1, domain 2 ACH33_17885 PF04983 RNA polymerase Rpb1, domain 3 ACH33_17885 PF05000 RNA polymerase Rpb1, domain 4 ACH33_17885 PF04998 RNA polymerase Rpb1, domain 5 ACH33_17890 PF04565 RNA polymerase Rpb2, domain 3 ACH33_17890 PF00562 RNA polymerase Rpb2, domain 6 ACH33_17890 PF04560 RNA polymerase Rpb2, domain 7 ACH33_17890 PF04563 RNA polymerase beta subunit ACH33_17890 PF04561 RNA polymerase Rpb2, domain 2 ACH33_17890 PF10385 RNA polymerase beta subunit external 1 domain ACH33_17895 PF05175 Methyltransferase small domain ACH33_17900 PF16320 Ribosomal protein L7/L12 dimerisation domain ACH33_17900 PF00542 Ribosomal protein L7/L12 C-terminal domain ACH33_17905 PF00466 Ribosomal protein L10 ACH33_17910 PF00687 Ribosomal protein L1p/L10e family ACH33_17915 PF03946 Ribosomal protein L11, N-terminal domain ACH33_17915 PF00298 Ribosomal protein L11, RNA binding domain ACH33_17920 PF00467 KOW motif ACH33_17920 PF02357 Transcription termination factor nusG ACH33_17925 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ACH33_17930 PF00471 Ribosomal protein L33 ACH33_17935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ACH33_17935 PF00672 HAMP domain ACH33_17935 PF02743 Cache domain ACH33_17940 PF04542 Sigma-70 region 2 ACH33_17940 PF08281 Sigma-70, region 4 ACH33_17945 PF05991 YacP-like NYN domain ACH33_17950 PF00588 SpoU rRNA Methylase family ACH33_17950 PF08032 RNA 2'-O ribose methyltransferase substrate binding ACH33_17955 PF00636 Ribonuclease III domain ACH33_17960 PF01406 tRNA synthetases class I (C) catalytic domain ACH33_17960 PF09190 DALR domain ACH33_17965 PF00132 Bacterial transferase hexapeptide (six repeats) ACH33_17965 PF06426 Serine acetyltransferase, N-terminal ACH33_17970 PF00749 tRNA synthetases class I (E and Q), catalytic domain ACH33_17975 PF02542 YgbB family ACH33_17980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACH33_17990 PF02559 CarD-like/TRCF domain ACH33_17995 PF01066 CDP-alcohol phosphatidyltransferase ACH33_18000 PF10635 DisA bacterial checkpoint controller linker region ACH33_18000 PF02457 DisA bacterial checkpoint controller nucleotide-binding ACH33_18005 PF18073 Rubredoxin metal binding domain ACH33_18010 PF07724 AAA domain (Cdc48 subfamily) ACH33_18010 PF17871 AAA lid domain ACH33_18010 PF02861 Clp amino terminal domain, pathogenicity island component ACH33_18010 PF10431 C-terminal, D2-small domain, of ClpB protein ACH33_18010 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_18015 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ACH33_18020 PF02151 UvrB/uvrC motif ACH33_18025 PF05848 CtsR N-terminal HTH domain ACH33_18025 PF17727 CtsR C-terminal dimerization domain ACH33_18030 PF00005 ABC transporter ACH33_18035 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_18040 PF00528 Binding-protein-dependent transport system inner membrane component ACH33_18045 PF12849 PBP superfamily domain ACH33_18050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ACH33_18050 PF13378 Enolase C-terminal domain-like ACH33_18060 PF07687 Peptidase dimerisation domain ACH33_18060 PF01546 Peptidase family M20/M25/M40 ACH33_18095 PF01272 Transcription elongation factor, GreA/GreB, C-term ACH33_18095 PF03449 Transcription elongation factor, N-terminal ACH33_18100 PF01207 Dihydrouridine synthase (Dus) ACH33_18105 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ACH33_18110 PF02152 Dihydroneopterin aldolase ACH33_18115 PF00809 Pterin binding enzyme ACH33_18120 PF01063 Amino-transferase class IV ACH33_18125 PF00117 Glutamine amidotransferase class-I ACH33_18130 PF00425 chorismate binding enzyme ACH33_18130 PF04715 Anthranilate synthase component I, N terminal region ACH33_18135 PF00291 Pyridoxal-phosphate dependent enzyme ACH33_18140 PF01430 Hsp33 protein ACH33_18145 PF03309 Type III pantothenate kinase ACH33_18150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ACH33_18150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ACH33_18155 PF02910 Fumarate reductase flavoprotein C-term ACH33_18155 PF00890 FAD binding domain ACH33_18160 PF02445 Quinolinate synthetase A protein ACH33_18165 PF17862 AAA+ lid domain ACH33_18165 PF01434 Peptidase family M41 ACH33_18165 PF00004 ATPase family associated with various cellular activities (AAA) ACH33_18165 PF06480 FtsH Extracellular ACH33_18170 PF01171 PP-loop family ACH33_18170 PF00156 Phosphoribosyl transferase domain ACH33_18170 PF11734 TilS substrate C-terminal domain ACH33_18175 PF01171 PP-loop family ACH33_18175 PF09179 TilS substrate binding domain ACH33_18175 PF11734 TilS substrate C-terminal domain ACH33_18185 PF07228 Stage II sporulation protein E (SpoIIE) ACH33_18200 PF07873 YabP family ACH33_18205 PF01479 S4 domain ACH33_18210 PF03819 MazG nucleotide pyrophosphohydrolase domain ACH33_18210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_18215 PF01943 Polysaccharide biosynthesis protein ACH33_18215 PF14667 Polysaccharide biosynthesis C-terminal domain ACH33_18225 PF15714 Stage V sporulation protein T C-terminal, transcription factor ACH33_18225 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ACH33_18230 PF13145 PPIC-type PPIASE domain ACH33_18235 PF17757 UvrB interaction domain ACH33_18235 PF03461 TRCF domain ACH33_18235 PF00271 Helicase conserved C-terminal domain ACH33_18235 PF00270 DEAD/DEAH box helicase ACH33_18235 PF02559 CarD-like/TRCF domain ACH33_18245 PF01195 Peptidyl-tRNA hydrolase ACH33_18250 PF14693 Ribosomal protein TL5, C-terminal domain ACH33_18250 PF01386 Ribosomal L25p family ACH33_18255 PF14572 Phosphoribosyl synthetase-associated domain ACH33_18255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ACH33_18260 PF00483 Nucleotidyl transferase ACH33_18260 PF00132 Bacterial transferase hexapeptide (six repeats) ACH33_18265 PF04026 SpoVG ACH33_18270 PF01042 Endoribonuclease L-PSP ACH33_18275 PF00156 Phosphoribosyl transferase domain ACH33_18275 PF09182 Bacterial purine repressor, N-terminal ACH33_18280 PF08544 GHMP kinases C terminal ACH33_18280 PF00288 GHMP kinases N terminal domain ACH33_18285 PF00269 Small, acid-soluble spore proteins, alpha/beta type ACH33_18290 PF06257 Biofilm formation stimulator VEG ACH33_18295 PF05582 YabG peptidase U57 ACH33_18300 PF00398 Ribosomal RNA adenine dimethylase ACH33_18305 PF13331 Domain of unknown function (DUF4093) ACH33_18305 PF13662 Toprim domain ACH33_18310 PF07501 G5 domain ACH33_18310 PF06725 3D domain ACH33_18310 PF03990 G5-linked-Ubiquitin-like domain ACH33_18315 PF01026 TatD related DNase ACH33_18320 PF01588 Putative tRNA binding domain ACH33_18320 PF08264 Anticodon-binding domain of tRNA ACH33_18320 PF09334 tRNA synthetases class I (M) ACH33_18325 PF18277 AbrB C-terminal domain ACH33_18325 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ACH33_18330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ACH33_18335 PF05175 Methyltransferase small domain ACH33_18340 PF06156 Initiation control protein YabA ACH33_18345 PF04468 PSP1 C-terminal conserved region ACH33_18355 PF03885 Protein of unknown function (DUF327) ACH33_18360 PF02223 Thymidylate kinase ACH33_18365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ACH33_18365 PF01276 Orn/Lys/Arg decarboxylase, major domain