locus-tag class description IRT44_00035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_00035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_00040 PF01595 Cyclin M transmembrane N-terminal domain IRT44_00040 PF03471 Transporter associated domain IRT44_00040 PF00571 CBS domain IRT44_00045 PF00580 UvrD/REP helicase N-terminal domain IRT44_00045 PF13361 UvrD-like helicase C-terminal domain IRT44_00075 PF00155 Aminotransferase class I and II IRT44_00075 PF00392 Bacterial regulatory proteins, gntR family IRT44_00080 PF03591 AzlC protein IRT44_00090 PF01584 CheW-like domain IRT44_00110 PF01975 Survival protein SurE IRT44_00125 PF07690 Major Facilitator Superfamily IRT44_00130 PF00005 ABC transporter IRT44_00135 PF02653 Branched-chain amino acid transport system / permease component IRT44_00150 PF01595 Cyclin M transmembrane N-terminal domain IRT44_00150 PF03471 Transporter associated domain IRT44_00150 PF00571 CBS domain IRT44_00160 PF08281 Sigma-70, region 4 IRT44_00160 PF04542 Sigma-70 region 2 IRT44_00170 PF12679 ABC-2 family transporter protein IRT44_00185 PF07690 Major Facilitator Superfamily IRT44_00190 PF00753 Metallo-beta-lactamase superfamily IRT44_00200 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_00200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IRT44_00215 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_00225 PF07690 Major Facilitator Superfamily IRT44_00230 PF05225 helix-turn-helix, Psq domain IRT44_00230 PF02810 SEC-C motif IRT44_00245 PF01966 HD domain IRT44_00245 PF01336 OB-fold nucleic acid binding domain IRT44_00270 PF02540 NAD synthase IRT44_00275 PF00557 Metallopeptidase family M24 IRT44_00295 PF01613 Flavin reductase like domain IRT44_00300 PF04209 homogentisate 1,2-dioxygenase IRT44_00305 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_00310 PF00849 RNA pseudouridylate synthase IRT44_00320 PF08534 Redoxin IRT44_00335 PF02436 Conserved carboxylase domain IRT44_00335 PF00682 HMGL-like IRT44_00335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_00335 PF00364 Biotin-requiring enzyme IRT44_00335 PF00289 Biotin carboxylase, N-terminal domain IRT44_00335 PF02785 Biotin carboxylase C-terminal domain IRT44_00345 PF09579 Sporulation protein YtfJ (Spore_YtfJ) IRT44_00355 PF01476 LysM domain IRT44_00355 PF06725 3D domain IRT44_00360 PF03734 L,D-transpeptidase catalytic domain IRT44_00365 PF07486 Cell Wall Hydrolase IRT44_00365 PF01471 Putative peptidoglycan binding domain IRT44_00370 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_00375 PF07451 Stage V sporulation protein AD (SpoVAD) IRT44_00380 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_00385 PF04239 Protein of unknown function (DUF421) IRT44_00395 PF00269 Small, acid-soluble spore proteins, alpha/beta type IRT44_00400 PF04101 Glycosyltransferase family 28 C-terminal domain IRT44_00400 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase IRT44_00410 PF03741 Integral membrane protein TerC family IRT44_00415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_00415 PF00512 His Kinase A (phospho-acceptor) domain IRT44_00415 PF00989 PAS fold IRT44_00415 PF08447 PAS fold IRT44_00520 PF13276 HTH-like domain IRT44_00520 PF00665 Integrase core domain IRT44_00520 PF13333 Integrase core domain IRT44_00525 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_00530 PF02568 Thiamine biosynthesis protein (ThiI) IRT44_00530 PF02926 THUMP domain IRT44_00535 PF00266 Aminotransferase class-V IRT44_00545 PF01678 Diaminopimelate epimerase IRT44_00560 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) IRT44_00570 PF00106 short chain dehydrogenase IRT44_00575 PF07690 Major Facilitator Superfamily IRT44_00590 PF06018 CodY GAF-like domain IRT44_00590 PF08222 CodY helix-turn-helix domain IRT44_00595 PF07070 SpoOM protein IRT44_00605 PF14034 Sporulation protein YtrH IRT44_00615 PF07690 Major Facilitator Superfamily IRT44_00625 PF01966 HD domain IRT44_00635 PF05343 M42 glutamyl aminopeptidase IRT44_00650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_00660 PF06160 Septation ring formation regulator, EzrA IRT44_00665 PF00440 Bacterial regulatory proteins, tetR family IRT44_00675 PF00753 Metallo-beta-lactamase superfamily IRT44_00680 PF00990 Diguanylate cyclase, GGDEF domain IRT44_00685 PF00300 Histidine phosphatase superfamily (branch 1) IRT44_00695 PF01479 S4 domain IRT44_00695 PF00163 Ribosomal protein S4/S9 N-terminal domain IRT44_00705 PF01479 S4 domain IRT44_00705 PF00579 tRNA synthetases class I (W and Y) IRT44_00710 PF00912 Transglycosylase IRT44_00710 PF00905 Penicillin binding protein transpeptidase domain IRT44_00715 PF00583 Acetyltransferase (GNAT) family IRT44_00720 PF00571 CBS domain IRT44_00725 PF00850 Histone deacetylase domain IRT44_00730 PF01048 Phosphorylase superfamily IRT44_00735 PF00356 Bacterial regulatory proteins, lacI family IRT44_00745 PF01817 Chorismate mutase type II IRT44_00745 PF00793 DAHP synthetase I family IRT44_00750 PF02491 SHS2 domain inserted in FTSA IRT44_00755 PF11009 Protein of unknown function (DUF2847) IRT44_00775 PF02073 Thermophilic metalloprotease (M29) IRT44_00780 PF03551 Transcriptional regulator PadR-like family IRT44_00780 PF10400 Virulence activator alpha C-term IRT44_00790 PF01638 HxlR-like helix-turn-helix IRT44_00795 PF00239 Resolvase, N terminal domain IRT44_00795 PF02796 Helix-turn-helix domain of resolvase IRT44_00800 PF13180 PDZ domain IRT44_00820 PF04454 Encapsulating protein for peroxidase IRT44_00825 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_00830 PF00155 Aminotransferase class I and II IRT44_00840 PF00155 Aminotransferase class I and II IRT44_00845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_00850 PF00873 AcrB/AcrD/AcrF family IRT44_00855 PF01047 MarR family IRT44_00860 PF07690 Major Facilitator Superfamily IRT44_00865 PF01967 MoaC family IRT44_00870 PF02391 MoaE protein IRT44_00875 PF00899 ThiF family IRT44_00880 PF00330 Aconitase family (aconitate hydratase) IRT44_00880 PF00694 Aconitase C-terminal domain IRT44_00890 PF01695 IstB-like ATP binding protein IRT44_00895 PF02796 Helix-turn-helix domain of resolvase IRT44_00895 PF00665 Integrase core domain IRT44_00910 PF09339 IclR helix-turn-helix domain IRT44_00910 PF01614 Bacterial transcriptional regulator IRT44_00915 PF00248 Aldo/keto reductase family IRT44_00925 PF08240 Alcohol dehydrogenase GroES-like domain IRT44_00925 PF00107 Zinc-binding dehydrogenase IRT44_00930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_00930 PF03466 LysR substrate binding domain IRT44_00935 PF00892 EamA-like transporter family IRT44_00945 PF10502 Signal peptidase, peptidase S26 IRT44_00955 PF01580 FtsK/SpoIIIE family IRT44_00955 PF17854 FtsK alpha domain IRT44_00955 PF09397 Ftsk gamma domain IRT44_00970 PF01747 ATP-sulfurylase IRT44_00970 PF14306 PUA-like domain IRT44_00975 PF01507 Phosphoadenosine phosphosulfate reductase family IRT44_00980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_00990 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IRT44_00990 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IRT44_01000 PF00459 Inositol monophosphatase family IRT44_01015 PF00920 Dehydratase family IRT44_01020 PF13378 Enolase C-terminal domain-like IRT44_01020 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IRT44_01030 PF02390 Putative methyltransferase IRT44_01035 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_01040 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_01040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_01060 PF01476 LysM domain IRT44_01060 PF03734 L,D-transpeptidase catalytic domain IRT44_01070 PF00912 Transglycosylase IRT44_01070 PF00905 Penicillin binding protein transpeptidase domain IRT44_01075 PF02779 Transketolase, pyrimidine binding domain IRT44_01075 PF00456 Transketolase, thiamine diphosphate binding domain IRT44_01075 PF02780 Transketolase, C-terminal domain IRT44_01085 PF13344 Haloacid dehalogenase-like hydrolase IRT44_01085 PF00293 NUDIX domain IRT44_01090 PF00672 HAMP domain IRT44_01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_01090 PF00512 His Kinase A (phospho-acceptor) domain IRT44_01090 PF13426 PAS domain IRT44_01095 PF00072 Response regulator receiver domain IRT44_01095 PF00486 Transcriptional regulatory protein, C terminal IRT44_01100 PF09335 SNARE associated Golgi protein IRT44_01120 PF07690 Major Facilitator Superfamily IRT44_01125 PF12848 ABC transporter IRT44_01125 PF00005 ABC transporter IRT44_01125 PF16326 ABC transporter C-terminal domain IRT44_01145 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_01150 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_01155 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01160 PF00005 ABC transporter IRT44_01170 PF00723 Glycosyl hydrolases family 15 IRT44_01175 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01180 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01190 PF00356 Bacterial regulatory proteins, lacI family IRT44_01200 PF00459 Inositol monophosphatase family IRT44_01210 PF02554 Carbon starvation protein CstA IRT44_01210 PF13722 5TM C-terminal transporter carbon starvation CstA IRT44_01215 PF04397 LytTr DNA-binding domain IRT44_01215 PF00072 Response regulator receiver domain IRT44_01220 PF07694 5TMR of 5TMR-LYT IRT44_01220 PF13492 GAF domain IRT44_01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_01220 PF06580 Histidine kinase IRT44_01225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_01230 PF08241 Methyltransferase domain IRT44_01245 PF01189 16S rRNA methyltransferase RsmB/F IRT44_01245 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IRT44_01245 PF17126 RsmF rRNA methyltransferase first C-terminal domain IRT44_01250 PF00270 DEAD/DEAH box helicase IRT44_01250 PF00271 Helicase conserved C-terminal domain IRT44_01255 PF01546 Peptidase family M20/M25/M40 IRT44_01260 PF04607 Region found in RelA / SpoT proteins IRT44_01265 PF08447 PAS fold IRT44_01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_01265 PF13426 PAS domain IRT44_01280 PF12392 Collagenase IRT44_01280 PF01136 Peptidase family U32 IRT44_01285 PF06569 Protein of unknown function (DUF1128) IRT44_01295 PF05977 Transmembrane secretion effector IRT44_01300 PF00682 HMGL-like IRT44_01300 PF08502 LeuA allosteric (dimerisation) domain IRT44_01310 PF14398 YheC/D like ATP-grasp IRT44_01315 PF07687 Peptidase dimerisation domain IRT44_01315 PF01546 Peptidase family M20/M25/M40 IRT44_01320 PF00186 Dihydrofolate reductase IRT44_01325 PF00303 Thymidylate synthase IRT44_01340 PF00155 Aminotransferase class I and II IRT44_01340 PF00392 Bacterial regulatory proteins, gntR family IRT44_01345 PF00313 'Cold-shock' DNA-binding domain IRT44_01350 PF00474 Sodium:solute symporter family IRT44_01355 PF00155 Aminotransferase class I and II IRT44_01355 PF00392 Bacterial regulatory proteins, gntR family IRT44_01360 PF00350 Dynamin family IRT44_01365 PF00350 Dynamin family IRT44_01370 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_01375 PF03845 Spore germination protein IRT44_01380 PF05504 Spore germination B3/ GerAC like, C-terminal IRT44_01390 PF03845 Spore germination protein IRT44_01395 PF00403 Heavy-metal-associated domain IRT44_01400 PF01022 Bacterial regulatory protein, arsR family IRT44_01405 PF07670 Nucleoside recognition IRT44_01405 PF02421 Ferrous iron transport protein B IRT44_01405 PF17910 FeoB cytosolic helical domain IRT44_01405 PF04023 FeoA domain IRT44_01405 PF07664 Ferrous iron transport protein B C terminus IRT44_01410 PF07664 Ferrous iron transport protein B C terminus IRT44_01410 PF17910 FeoB cytosolic helical domain IRT44_01410 PF02421 Ferrous iron transport protein B IRT44_01410 PF07670 Nucleoside recognition IRT44_01415 PF07670 Nucleoside recognition IRT44_01415 PF17910 FeoB cytosolic helical domain IRT44_01415 PF07664 Ferrous iron transport protein B C terminus IRT44_01415 PF02421 Ferrous iron transport protein B IRT44_01430 PF02653 Branched-chain amino acid transport system / permease component IRT44_01435 PF00005 ABC transporter IRT44_01450 PF00465 Iron-containing alcohol dehydrogenase IRT44_01455 PF00171 Aldehyde dehydrogenase family IRT44_01460 PF00356 Bacterial regulatory proteins, lacI family IRT44_01465 PF00860 Permease family IRT44_01470 PF00156 Phosphoribosyl transferase domain IRT44_01475 PF03193 RsgA GTPase IRT44_01495 PF00561 alpha/beta hydrolase fold IRT44_01500 PF13416 Bacterial extracellular solute-binding protein IRT44_01505 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01510 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01515 PF00005 ABC transporter IRT44_01515 PF08402 TOBE domain IRT44_01520 PF10400 Virulence activator alpha C-term IRT44_01520 PF03551 Transcriptional regulator PadR-like family IRT44_01525 PF13407 Periplasmic binding protein domain IRT44_01530 PF02653 Branched-chain amino acid transport system / permease component IRT44_01535 PF00005 ABC transporter IRT44_01540 PF05025 RbsD / FucU transport protein family IRT44_01545 PF00294 pfkB family carbohydrate kinase IRT44_01550 PF00356 Bacterial regulatory proteins, lacI family IRT44_01555 PF02589 LUD domain IRT44_01560 PF11870 Domain of unknown function (DUF3390) IRT44_01560 PF13183 4Fe-4S dicluster domain IRT44_01560 PF02589 LUD domain IRT44_01565 PF02754 Cysteine-rich domain IRT44_01570 PF00392 Bacterial regulatory proteins, gntR family IRT44_01570 PF07729 FCD domain IRT44_01575 PF02652 L-lactate permease IRT44_01585 PF01979 Amidohydrolase family IRT44_01590 PF00583 Acetyltransferase (GNAT) family IRT44_01600 PF03060 Nitronate monooxygenase IRT44_01605 PF00293 NUDIX domain IRT44_01615 PF02585 GlcNAc-PI de-N-acetylase IRT44_01620 PF01869 BadF/BadG/BcrA/BcrD ATPase family IRT44_01625 PF14698 Argininosuccinate lyase C-terminal IRT44_01625 PF00206 Lyase IRT44_01630 PF02585 GlcNAc-PI de-N-acetylase IRT44_01635 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01640 PF00005 ABC transporter IRT44_01640 PF08402 TOBE domain IRT44_01650 PF01047 MarR family IRT44_01650 PF00480 ROK family IRT44_01660 PF02743 Cache domain IRT44_01660 PF00672 HAMP domain IRT44_01660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_01670 PF06778 Chlorite dismutase IRT44_01675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IRT44_01680 PF01418 Helix-turn-helix domain, rpiR family IRT44_01680 PF01380 SIS domain IRT44_01685 PF07457 Protein of unknown function (DUF1516) IRT44_01690 PF00317 Ribonucleotide reductase, all-alpha domain IRT44_01690 PF02867 Ribonucleotide reductase, barrel domain IRT44_01690 PF03477 ATP cone domain IRT44_01695 PF00268 Ribonucleotide reductase, small chain IRT44_01700 PF00501 AMP-binding enzyme IRT44_01700 PF13193 AMP-binding enzyme C-terminal domain IRT44_01705 PF01325 Iron dependent repressor, N-terminal DNA binding domain IRT44_01705 PF00480 ROK family IRT44_01715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_01715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_01715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_01715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_01720 PF16363 GDP-mannose 4,6 dehydratase IRT44_01725 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IRT44_01725 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IRT44_01730 PF10509 Galactokinase galactose-binding signature IRT44_01730 PF08544 GHMP kinases C terminal IRT44_01730 PF00288 GHMP kinases N terminal domain IRT44_01740 PF03932 CutC family IRT44_01745 PF06508 Queuosine biosynthesis protein QueC IRT44_01750 PF01242 6-pyruvoyl tetrahydropterin synthase IRT44_01755 PF04055 Radical SAM superfamily IRT44_01760 PF14489 QueF-like protein IRT44_01770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_01770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IRT44_01775 PF02954 Bacterial regulatory protein, Fis family IRT44_01775 PF13426 PAS domain IRT44_01775 PF00158 Sigma-54 interaction domain IRT44_01780 PF00171 Aldehyde dehydrogenase family IRT44_01790 PF13458 Periplasmic binding protein IRT44_01795 PF01476 LysM domain IRT44_01795 PF03734 L,D-transpeptidase catalytic domain IRT44_01805 PF00005 ABC transporter IRT44_01810 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01815 PF00296 Luciferase-like monooxygenase IRT44_01820 PF09084 NMT1/THI5 like IRT44_01830 PF01970 Tripartite tricarboxylate transporter TctA family IRT44_01840 PF18719 ArlS sensor domain IRT44_01840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_01840 PF00512 His Kinase A (phospho-acceptor) domain IRT44_01845 PF00486 Transcriptional regulatory protein, C terminal IRT44_01845 PF00072 Response regulator receiver domain IRT44_01870 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_01875 PF00005 ABC transporter IRT44_01875 PF09383 NIL domain IRT44_01880 PF03180 NLPA lipoprotein IRT44_01890 PF00174 Oxidoreductase molybdopterin binding domain IRT44_01895 PF13380 CoA binding domain IRT44_01900 PF02789 Cytosol aminopeptidase family, N-terminal domain IRT44_01900 PF00883 Cytosol aminopeptidase family, catalytic domain IRT44_01910 PF02681 Divergent PAP2 family IRT44_01915 PF01497 Periplasmic binding protein IRT44_01920 PF06725 3D domain IRT44_01930 PF17302 Family of unknown function (DUF5351) IRT44_01940 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_01945 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_01975 PF01521 Iron-sulphur cluster biosynthesis IRT44_01985 PF04055 Radical SAM superfamily IRT44_01990 PF07293 Protein of unknown function (DUF1450) IRT44_01995 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_02000 PF13333 Integrase core domain IRT44_02000 PF00665 Integrase core domain IRT44_02000 PF13276 HTH-like domain IRT44_02015 PF07315 Protein of unknown function (DUF1462) IRT44_02020 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_02025 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_02030 PF01106 NifU-like domain IRT44_02040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_02040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_02050 PF04608 Phosphatidylglycerophosphatase A IRT44_02055 PF13344 Haloacid dehalogenase-like hydrolase IRT44_02065 PF01934 Protein of unknown function DUF86 IRT44_02075 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IRT44_02085 PF06265 Protein of unknown function (DUF1027) IRT44_02095 PF04055 Radical SAM superfamily IRT44_02095 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IRT44_02105 PF00149 Calcineurin-like phosphoesterase IRT44_02110 PF01969 Protein of unknown function DUF111 IRT44_02120 PF01969 Protein of unknown function DUF111 IRT44_02125 PF01551 Peptidase family M23 IRT44_02130 PF00171 Aldehyde dehydrogenase family IRT44_02135 PF00885 6,7-dimethyl-8-ribityllumazine synthase IRT44_02140 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IRT44_02140 PF00925 GTP cyclohydrolase II IRT44_02145 PF00677 Lumazine binding domain IRT44_02150 PF01872 RibD C-terminal domain IRT44_02150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IRT44_02155 PF09560 Sporulation protein YunB (Spo_YunB) IRT44_02160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_02165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_02165 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IRT44_02170 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_02175 PF00682 HMGL-like IRT44_02180 PF02515 CoA-transferase family III IRT44_02185 PF00392 Bacterial regulatory proteins, gntR family IRT44_02185 PF07729 FCD domain IRT44_02190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_02195 PF00027 Cyclic nucleotide-binding domain IRT44_02195 PF13545 Crp-like helix-turn-helix domain IRT44_02200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_02210 PF01544 CorA-like Mg2+ transporter protein IRT44_02215 PF01966 HD domain IRT44_02215 PF11871 Domain of unknown function (DUF3391) IRT44_02220 PF08827 Domain of unknown function (DUF1805) IRT44_02230 PF02872 5'-nucleotidase, C-terminal domain IRT44_02235 PF01925 Sulfite exporter TauE/SafE IRT44_02240 PF01904 Protein of unknown function DUF72 IRT44_02250 PF05504 Spore germination B3/ GerAC like, C-terminal IRT44_02255 PF03845 Spore germination protein IRT44_02260 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_02265 PF01145 SPFH domain / Band 7 family IRT44_02265 PF15975 Flotillin IRT44_02275 PF00392 Bacterial regulatory proteins, gntR family IRT44_02275 PF00155 Aminotransferase class I and II IRT44_02280 PF00892 EamA-like transporter family IRT44_02285 PF05343 M42 glutamyl aminopeptidase IRT44_02310 PF02129 X-Pro dipeptidyl-peptidase (S15 family) IRT44_02310 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain IRT44_02340 PF01458 Uncharacterized protein family (UPF0051) IRT44_02345 PF01592 NifU-like N terminal domain IRT44_02350 PF00266 Aminotransferase class-V IRT44_02355 PF01458 Uncharacterized protein family (UPF0051) IRT44_02360 PF00005 ABC transporter IRT44_02365 PF01293 Phosphoenolpyruvate carboxykinase IRT44_02370 PF01546 Peptidase family M20/M25/M40 IRT44_02370 PF07687 Peptidase dimerisation domain IRT44_02390 PF01597 Glycine cleavage H-protein IRT44_02395 PF00578 AhpC/TSA family IRT44_02400 PF10417 C-terminal domain of 1-Cys peroxiredoxin IRT44_02400 PF00578 AhpC/TSA family IRT44_02405 PF00155 Aminotransferase class I and II IRT44_02410 PF03960 ArsC family IRT44_02425 PF01522 Polysaccharide deacetylase IRT44_02430 PF00005 ABC transporter IRT44_02445 PF07690 Major Facilitator Superfamily IRT44_02450 PF13302 Acetyltransferase (GNAT) domain IRT44_02455 PF01008 Initiation factor 2 subunit family IRT44_02460 PF01636 Phosphotransferase enzyme family IRT44_02465 PF13800 Sigma factor regulator N-terminal IRT44_02465 PF13791 Sigma factor regulator C-terminal IRT44_02470 PF04542 Sigma-70 region 2 IRT44_02470 PF08281 Sigma-70, region 4 IRT44_02480 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain IRT44_02480 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain IRT44_02490 PF00596 Class II Aldolase and Adducin N-terminal domain IRT44_02495 PF03079 ARD/ARD' family IRT44_02500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_02500 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_02500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_02505 PF02803 Thiolase, C-terminal domain IRT44_02505 PF00108 Thiolase, N-terminal domain IRT44_02510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IRT44_02510 PF00378 Enoyl-CoA hydratase/isomerase IRT44_02510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IRT44_02525 PF00005 ABC transporter IRT44_02535 PF01472 PUA domain IRT44_02535 PF00696 Amino acid kinase family IRT44_02540 PF00171 Aldehyde dehydrogenase family IRT44_02545 PF14748 Pyrroline-5-carboxylate reductase dimerisation IRT44_02545 PF03807 NADP oxidoreductase coenzyme F420-dependent IRT44_02560 PF07875 Coat F domain IRT44_02565 PF00155 Aminotransferase class I and II IRT44_02565 PF00392 Bacterial regulatory proteins, gntR family IRT44_02570 PF01810 LysE type translocator IRT44_02595 PF12832 MFS_1 like family IRT44_02605 PF02558 Ketopantoate reductase PanE/ApbA IRT44_02605 PF08546 Ketopantoate reductase PanE/ApbA C terminal IRT44_02610 PF00120 Glutamine synthetase, catalytic domain IRT44_02610 PF03951 Glutamine synthetase, beta-Grasp domain IRT44_02615 PF00005 ABC transporter IRT44_02625 PF02553 Cobalt transport protein component CbiN IRT44_02630 PF01891 Cobalt uptake substrate-specific transmembrane region IRT44_02635 PF01180 Dihydroorotate dehydrogenase IRT44_02645 PF01695 IstB-like ATP binding protein IRT44_02650 PF00665 Integrase core domain IRT44_02660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IRT44_02660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IRT44_02665 PF17853 GGDEF-like domain IRT44_02665 PF13556 PucR C-terminal helix-turn-helix domain IRT44_02665 PF06018 CodY GAF-like domain IRT44_02670 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_02670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_02675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IRT44_02675 PF02817 e3 binding domain IRT44_02675 PF00364 Biotin-requiring enzyme IRT44_02680 PF02780 Transketolase, C-terminal domain IRT44_02680 PF02779 Transketolase, pyrimidine binding domain IRT44_02685 PF00676 Dehydrogenase E1 component IRT44_02690 PF03099 Biotin/lipoate A/B protein ligase family IRT44_02695 PF01590 GAF domain IRT44_02695 PF00158 Sigma-54 interaction domain IRT44_02695 PF02954 Bacterial regulatory protein, Fis family IRT44_02700 PF00072 Response regulator receiver domain IRT44_02715 PF08447 PAS fold IRT44_02715 PF00989 PAS fold IRT44_02715 PF00512 His Kinase A (phospho-acceptor) domain IRT44_02715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_02720 PF00326 Prolyl oligopeptidase family IRT44_02725 PF00575 S1 RNA binding domain IRT44_02735 PF00873 AcrB/AcrD/AcrF family IRT44_02745 PF01144 Coenzyme A transferase IRT44_02750 PF01144 Coenzyme A transferase IRT44_02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_02765 PF03466 LysR substrate binding domain IRT44_02770 PF01810 LysE type translocator IRT44_02775 PF01842 ACT domain IRT44_02775 PF00551 Formyl transferase IRT44_02780 PF00107 Zinc-binding dehydrogenase IRT44_02780 PF08240 Alcohol dehydrogenase GroES-like domain IRT44_02785 PF00465 Iron-containing alcohol dehydrogenase IRT44_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_02790 PF00512 His Kinase A (phospho-acceptor) domain IRT44_02790 PF00989 PAS fold IRT44_02800 PF00440 Bacterial regulatory proteins, tetR family IRT44_02810 PF00005 ABC transporter IRT44_02815 PF13533 Biotin-lipoyl like IRT44_02820 PF13520 Amino acid permease IRT44_02825 PF00580 UvrD/REP helicase N-terminal domain IRT44_02825 PF12705 PD-(D/E)XK nuclease superfamily IRT44_02825 PF13361 UvrD-like helicase C-terminal domain IRT44_02830 PF13361 UvrD-like helicase C-terminal domain IRT44_02830 PF12705 PD-(D/E)XK nuclease superfamily IRT44_02835 PF13476 AAA domain IRT44_02845 PF02628 Cytochrome oxidase assembly protein IRT44_02850 PF01040 UbiA prenyltransferase family IRT44_02860 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) IRT44_02865 PF03626 Prokaryotic Cytochrome C oxidase subunit IV IRT44_02870 PF00510 Cytochrome c oxidase subunit III IRT44_02875 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_02880 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IRT44_02880 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IRT44_02880 PF00034 Cytochrome c IRT44_02890 PF07690 Major Facilitator Superfamily IRT44_02905 PF01734 Patatin-like phospholipase IRT44_02915 PF13186 Iron-sulfur cluster-binding domain IRT44_02915 PF04055 Radical SAM superfamily IRT44_02920 PF01790 Prolipoprotein diacylglyceryl transferase IRT44_02940 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_02940 PF17863 AAA lid domain IRT44_02955 PF00005 ABC transporter IRT44_02965 PF17314 Family of unknown function (DUF5360) IRT44_02970 PF00893 Small Multidrug Resistance protein IRT44_02980 PF13302 Acetyltransferase (GNAT) domain IRT44_02995 PF07739 TipAS antibiotic-recognition domain IRT44_02995 PF13411 MerR HTH family regulatory protein IRT44_03000 PF13482 RNase_H superfamily IRT44_03005 PF09369 Domain of unknown function (DUF1998) IRT44_03005 PF00270 DEAD/DEAH box helicase IRT44_03005 PF00271 Helicase conserved C-terminal domain IRT44_03010 PF00106 short chain dehydrogenase IRT44_03015 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IRT44_03020 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_03025 PF00571 CBS domain IRT44_03025 PF00005 ABC transporter IRT44_03030 PF12802 MarR family IRT44_03035 PF00296 Luciferase-like monooxygenase IRT44_03040 PF01497 Periplasmic binding protein IRT44_03045 PF00005 ABC transporter IRT44_03050 PF01032 FecCD transport family IRT44_03055 PF01032 FecCD transport family IRT44_03060 PF00881 Nitroreductase family IRT44_03085 PF02687 FtsX-like permease family IRT44_03085 PF00005 ABC transporter IRT44_03085 PF12704 MacB-like periplasmic core domain IRT44_03090 PF00005 ABC transporter IRT44_03095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_03100 PF00486 Transcriptional regulatory protein, C terminal IRT44_03100 PF00072 Response regulator receiver domain IRT44_03105 PF00512 His Kinase A (phospho-acceptor) domain IRT44_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_03115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_03115 PF00672 HAMP domain IRT44_03115 PF02743 Cache domain IRT44_03120 PF00753 Metallo-beta-lactamase superfamily IRT44_03120 PF16123 Hydroxyacylglutathione hydrolase C-terminus IRT44_03125 PF07731 Multicopper oxidase IRT44_03125 PF00394 Multicopper oxidase IRT44_03125 PF07732 Multicopper oxidase IRT44_03130 PF01494 FAD binding domain IRT44_03135 PF01047 MarR family IRT44_03165 PF01668 SmpB protein IRT44_03170 PF00575 S1 RNA binding domain IRT44_03170 PF17876 Cold shock domain IRT44_03170 PF08206 Ribonuclease B OB domain IRT44_03170 PF00773 RNB domain IRT44_03175 PF03840 Preprotein translocase SecG subunit IRT44_03180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IRT44_03185 PF00005 ABC transporter IRT44_03195 PF01497 Periplasmic binding protein IRT44_03200 PF01032 FecCD transport family IRT44_03205 PF01032 FecCD transport family IRT44_03210 PF00005 ABC transporter IRT44_03215 PF00113 Enolase, C-terminal TIM barrel domain IRT44_03215 PF03952 Enolase, N-terminal domain IRT44_03220 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IRT44_03220 PF01676 Metalloenzyme superfamily IRT44_03225 PF00121 Triosephosphate isomerase IRT44_03230 PF00162 Phosphoglycerate kinase IRT44_03235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IRT44_03235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IRT44_03240 PF03553 Na+/H+ antiporter family IRT44_03245 PF04198 Putative sugar-binding domain IRT44_03255 PF04552 Sigma-54, DNA binding domain IRT44_03255 PF04963 Sigma-54 factor, core binding domain IRT44_03255 PF00309 Sigma-54 factor, Activator interacting domain (AID) IRT44_03280 PF04542 Sigma-70 region 2 IRT44_03280 PF08281 Sigma-70, region 4 IRT44_03295 PF00574 Clp protease IRT44_03315 PF00381 PTS HPr component phosphorylation site IRT44_03320 PF14527 WhiA LAGLIDADG-like domain IRT44_03320 PF02650 WhiA C-terminal HTH domain IRT44_03320 PF10298 WhiA N-terminal LAGLIDADG-like domain IRT44_03325 PF01933 Uncharacterised protein family UPF0052 IRT44_03330 PF03668 P-loop ATPase protein family IRT44_03335 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_03390 PF16868 NMT1-like family IRT44_03395 PF02954 Bacterial regulatory protein, Fis family IRT44_03395 PF00072 Response regulator receiver domain IRT44_03395 PF00158 Sigma-54 interaction domain IRT44_03400 PF00989 PAS fold IRT44_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_03400 PF00512 His Kinase A (phospho-acceptor) domain IRT44_03410 PF01502 Phosphoribosyl-AMP cyclohydrolase IRT44_03410 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IRT44_03415 PF00977 Histidine biosynthesis protein IRT44_03420 PF00977 Histidine biosynthesis protein IRT44_03425 PF00117 Glutamine amidotransferase class-I IRT44_03430 PF00475 Imidazoleglycerol-phosphate dehydratase IRT44_03435 PF00815 Histidinol dehydrogenase IRT44_03440 PF01634 ATP phosphoribosyltransferase IRT44_03445 PF13393 Histidyl-tRNA synthetase IRT44_03450 PF14602 Hexapeptide repeat of succinyl-transferase IRT44_03455 PF07475 HPr Serine kinase C-terminal domain IRT44_03455 PF02603 HPr Serine kinase N terminus IRT44_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_03460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_03470 PF01966 HD domain IRT44_03475 PF17760 UvrA interaction domain IRT44_03475 PF17755 UvrA DNA-binding domain IRT44_03480 PF00271 Helicase conserved C-terminal domain IRT44_03480 PF12344 Ultra-violet resistance protein B IRT44_03480 PF17757 UvrB interaction domain IRT44_03480 PF02151 UvrB/uvrC motif IRT44_03480 PF04851 Type III restriction enzyme, res subunit IRT44_03485 PF03963 Flagellar hook capping protein - N-terminal region IRT44_03495 PF17820 PDZ domain IRT44_03500 PF01471 Putative peptidoglycan binding domain IRT44_03500 PF03572 Peptidase family S41 IRT44_03500 PF17820 PDZ domain IRT44_03505 PF01551 Peptidase family M23 IRT44_03505 PF08525 Opacity-associated protein A N-terminal motif IRT44_03505 PF01476 LysM domain IRT44_03510 PF02687 FtsX-like permease family IRT44_03510 PF18075 FtsX extracellular domain IRT44_03515 PF00005 ABC transporter IRT44_03520 PF00465 Iron-containing alcohol dehydrogenase IRT44_03525 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_03530 PF14698 Argininosuccinate lyase C-terminal IRT44_03530 PF00206 Lyase IRT44_03535 PF00764 Arginosuccinate synthase IRT44_03545 PF01966 HD domain IRT44_03555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IRT44_03555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IRT44_03560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_03560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IRT44_03560 PF02142 MGS-like domain IRT44_03565 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IRT44_03565 PF00117 Glutamine amidotransferase class-I IRT44_03570 PF00202 Aminotransferase class-III IRT44_03575 PF00696 Amino acid kinase family IRT44_03580 PF01118 Semialdehyde dehydrogenase, NAD binding domain IRT44_03580 PF02774 Semialdehyde dehydrogenase, dimerisation domain IRT44_03585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IRT44_03605 PF07516 SecA Wing and Scaffold domain IRT44_03605 PF01043 SecA preprotein cross-linking domain IRT44_03605 PF07517 SecA DEAD-like domain IRT44_03610 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus IRT44_03610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IRT44_03615 PF00313 'Cold-shock' DNA-binding domain IRT44_03620 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_03625 PF00497 Bacterial extracellular solute-binding proteins, family 3 IRT44_03630 PF13677 Membrane MotB of proton-channel complex MotA/MotB IRT44_03630 PF00691 OmpA family IRT44_03635 PF01618 MotA/TolQ/ExbB proton channel family IRT44_03650 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_03665 PF02561 Flagellar protein FliS IRT44_03670 PF07196 Flagellin hook IN motif IRT44_03670 PF07195 Flagellar hook-associated protein 2 C-terminus IRT44_03670 PF02465 Flagellar hook-associated protein 2 N-terminus IRT44_03675 PF03646 FlaG protein IRT44_03680 PF00535 Glycosyl transferase family 2 IRT44_03685 PF00535 Glycosyl transferase family 2 IRT44_03685 PF13181 Tetratricopeptide repeat IRT44_03690 PF00700 Bacterial flagellin C-terminal helical region IRT44_03690 PF00669 Bacterial flagellin N-terminal helical region IRT44_03695 PF02599 Global regulator protein family IRT44_03700 PF02623 FliW protein IRT44_03710 PF00700 Bacterial flagellin C-terminal helical region IRT44_03710 PF00669 Bacterial flagellin N-terminal helical region IRT44_03715 PF00460 Flagella basal body rod protein IRT44_03715 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_03740 PF00271 Helicase conserved C-terminal domain IRT44_03740 PF04851 Type III restriction enzyme, res subunit IRT44_03750 PF00196 Bacterial regulatory proteins, luxR family IRT44_03750 PF00072 Response regulator receiver domain IRT44_03755 PF07730 Histidine kinase IRT44_03755 PF05384 Sensor protein DegS IRT44_03755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_03760 PF14883 Hypothetical glycosyl hydrolase family 13 IRT44_03760 PF01522 Polysaccharide deacetylase IRT44_03765 PF02773 S-adenosylmethionine synthetase, C-terminal domain IRT44_03765 PF02772 S-adenosylmethionine synthetase, central domain IRT44_03765 PF00438 S-adenosylmethionine synthetase, N-terminal domain IRT44_03775 PF00082 Subtilase family IRT44_03775 PF05922 Peptidase inhibitor I9 IRT44_03800 PF00248 Aldo/keto reductase family IRT44_03805 PF12729 Four helix bundle sensory module for signal transduction IRT44_03805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_03805 PF00672 HAMP domain IRT44_03825 PF00563 EAL domain IRT44_03825 PF00990 Diguanylate cyclase, GGDEF domain IRT44_03825 PF03707 Bacterial signalling protein N terminal repeat IRT44_03840 PF03527 RHS protein IRT44_03855 PF03527 RHS protein IRT44_03855 PF14220 Domain of unknown function (DUF4329) IRT44_03855 PF05593 RHS Repeat IRT44_03865 PF05593 RHS Repeat IRT44_03865 PF03527 RHS protein IRT44_03875 PF03527 RHS protein IRT44_03895 PF01695 IstB-like ATP binding protein IRT44_03900 PF00665 Integrase core domain IRT44_03900 PF02796 Helix-turn-helix domain of resolvase IRT44_03910 PF11553 Protein of unknown function (DUF3231) IRT44_03920 PF00395 S-layer homology domain IRT44_03930 PF09186 Domain of unknown function (DUF1949) IRT44_03930 PF01205 Uncharacterized protein family UPF0029 IRT44_03940 PF00395 S-layer homology domain IRT44_03945 PF00953 Glycosyl transferase family 4 IRT44_03950 PF03808 Glycosyl transferase WecB/TagA/CpsF family IRT44_03955 PF07977 FabA-like domain IRT44_03960 PF01066 CDP-alcohol phosphatidyltransferase IRT44_03975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_03975 PF00460 Flagella basal body rod protein IRT44_03985 PF12116 Stage III sporulation protein D IRT44_03990 PF01551 Peptidase family M23 IRT44_03995 PF08486 Stage II sporulation protein IRT44_04000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_04010 PF06612 Protein of unknown function (DUF1146) IRT44_04015 PF00361 Proton-conducting membrane transporter IRT44_04025 PF00361 Proton-conducting membrane transporter IRT44_04025 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus IRT44_04025 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus IRT44_04030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L IRT44_04035 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 IRT44_04040 PF12838 4Fe-4S dicluster domain IRT44_04045 PF00146 NADH dehydrogenase IRT44_04050 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit IRT44_04055 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit IRT44_04060 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit IRT44_04065 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 IRT44_04075 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IRT44_04075 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IRT44_04080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_04080 PF02874 ATP synthase alpha/beta family, beta-barrel domain IRT44_04085 PF00231 ATP synthase IRT44_04090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_04090 PF00306 ATP synthase alpha/beta chain, C terminal domain IRT44_04090 PF02874 ATP synthase alpha/beta family, beta-barrel domain IRT44_04095 PF00213 ATP synthase delta (OSCP) subunit IRT44_04100 PF00430 ATP synthase B/B' CF(0) IRT44_04105 PF00137 ATP synthase subunit C IRT44_04110 PF00119 ATP synthase A chain IRT44_04125 PF02803 Thiolase, C-terminal domain IRT44_04125 PF00108 Thiolase, N-terminal domain IRT44_04135 PF00561 alpha/beta hydrolase fold IRT44_04145 PF06968 Biotin and Thiamin Synthesis associated domain IRT44_04145 PF04055 Radical SAM superfamily IRT44_04155 PF00202 Aminotransferase class-III IRT44_04160 PF00963 Cohesin domain IRT44_04160 PF00395 S-layer homology domain IRT44_04165 PF02350 UDP-N-acetylglucosamine 2-epimerase IRT44_04180 PF13333 Integrase core domain IRT44_04180 PF13276 HTH-like domain IRT44_04180 PF00665 Integrase core domain IRT44_04185 PF00464 Serine hydroxymethyltransferase IRT44_04190 PF04260 Protein of unknown function (DUF436) IRT44_04195 PF02502 Ribose/Galactose Isomerase IRT44_04200 PF01451 Low molecular weight phosphotyrosine protein phosphatase IRT44_04205 PF02659 Putative manganese efflux pump IRT44_04210 PF01300 Telomere recombination IRT44_04210 PF03481 Putative GTP-binding controlling metal-binding IRT44_04215 PF09551 Stage II sporulation protein R (spore_II_R) IRT44_04220 PF17827 PrmC N-terminal domain IRT44_04220 PF05175 Methyltransferase small domain IRT44_04225 PF03462 PCRF domain IRT44_04225 PF00472 RF-1 domain IRT44_04235 PF00265 Thymidine kinase IRT44_04240 PF01197 Ribosomal protein L31 IRT44_04250 PF01551 Peptidase family M23 IRT44_04255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_04255 PF07497 Rho termination factor, RNA-binding domain IRT44_04255 PF07498 Rho termination factor, N-terminal domain IRT44_04260 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IRT44_04265 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_04270 PF00923 Transaldolase/Fructose-6-phosphate aldolase IRT44_04275 PF01116 Fructose-bisphosphate aldolase class-II IRT44_04280 PF00072 Response regulator receiver domain IRT44_04285 PF10997 Alternate to MurJ IRT44_04290 PF00117 Glutamine amidotransferase class-I IRT44_04290 PF06418 CTP synthase N-terminus IRT44_04295 PF05066 HB1, ASXL, restriction endonuclease HTH domain IRT44_04300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IRT44_04300 PF09125 Cytochrome C oxidase subunit II, transmembrane IRT44_04305 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_04310 PF01642 Methylmalonyl-CoA mutase IRT44_04310 PF02310 B12 binding domain IRT44_04315 PF00440 Bacterial regulatory proteins, tetR family IRT44_04315 PF08359 YsiA-like protein, C-terminal region IRT44_04325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_04325 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_04325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_04330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_04330 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_04330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_04335 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IRT44_04335 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IRT44_04340 PF00108 Thiolase, N-terminal domain IRT44_04340 PF02803 Thiolase, C-terminal domain IRT44_04360 PF02754 Cysteine-rich domain IRT44_04360 PF13183 4Fe-4S dicluster domain IRT44_04365 PF12544 Lysine-2,3-aminomutase IRT44_04370 PF02954 Bacterial regulatory protein, Fis family IRT44_04370 PF13426 PAS domain IRT44_04370 PF00158 Sigma-54 interaction domain IRT44_04395 PF00491 Arginase family IRT44_04400 PF17284 Spermidine synthase tetramerisation domain IRT44_04405 PF00905 Penicillin binding protein transpeptidase domain IRT44_04405 PF00912 Transglycosylase IRT44_04415 PF08741 YwhD family IRT44_04440 PF00085 Thioredoxin IRT44_04450 PF01966 HD domain IRT44_04455 PF00873 AcrB/AcrD/AcrF family IRT44_04485 PF01695 IstB-like ATP binding protein IRT44_04490 PF00665 Integrase core domain IRT44_04490 PF02796 Helix-turn-helix domain of resolvase IRT44_04500 PF01479 S4 domain IRT44_04500 PF00849 RNA pseudouridylate synthase IRT44_04515 PF02073 Thermophilic metalloprotease (M29) IRT44_04520 PF07690 Major Facilitator Superfamily IRT44_04540 PF02926 THUMP domain IRT44_04540 PF01170 Putative RNA methylase family UPF0020 IRT44_04550 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain IRT44_04550 PF04263 Thiamin pyrophosphokinase, catalytic domain IRT44_04555 PF03167 Uracil DNA glycosylase superfamily IRT44_04560 PF07690 Major Facilitator Superfamily IRT44_04565 PF02525 Flavodoxin-like fold IRT44_04575 PF00440 Bacterial regulatory proteins, tetR family IRT44_04580 PF00749 tRNA synthetases class I (E and Q), catalytic domain IRT44_04580 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IRT44_04590 PF00672 HAMP domain IRT44_04590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_04590 PF02743 Cache domain IRT44_04595 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_04605 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_04610 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_04615 PF17912 MalK OB fold domain IRT44_04615 PF00005 ABC transporter IRT44_04620 PF00665 Integrase core domain IRT44_04620 PF13276 HTH-like domain IRT44_04620 PF13333 Integrase core domain IRT44_04630 PF01048 Phosphorylase superfamily IRT44_04635 PF00174 Oxidoreductase molybdopterin binding domain IRT44_04640 PF02653 Branched-chain amino acid transport system / permease component IRT44_04645 PF02653 Branched-chain amino acid transport system / permease component IRT44_04650 PF00005 ABC transporter IRT44_04655 PF02608 ABC transporter substrate-binding protein PnrA-like IRT44_04660 PF00672 HAMP domain IRT44_04660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_04680 PF01144 Coenzyme A transferase IRT44_04685 PF01144 Coenzyme A transferase IRT44_04690 PF00248 Aldo/keto reductase family IRT44_04695 PF00296 Luciferase-like monooxygenase IRT44_04700 PF07690 Major Facilitator Superfamily IRT44_04705 PF01638 HxlR-like helix-turn-helix IRT44_04710 PF02954 Bacterial regulatory protein, Fis family IRT44_04710 PF00989 PAS fold IRT44_04710 PF00158 Sigma-54 interaction domain IRT44_04725 PF00005 ABC transporter IRT44_04740 PF01235 Sodium:alanine symporter family IRT44_04745 PF00381 PTS HPr component phosphorylation site IRT44_04750 PF02896 PEP-utilising enzyme, TIM barrel domain IRT44_04750 PF00391 PEP-utilising enzyme, mobile domain IRT44_04750 PF05524 PEP-utilising enzyme, N-terminal IRT44_04755 PF01232 Mannitol dehydrogenase Rossmann domain IRT44_04755 PF08125 Mannitol dehydrogenase C-terminal domain IRT44_04760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_04765 PF08279 HTH domain IRT44_04765 PF00874 PRD domain IRT44_04765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_04765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_04765 PF05043 Mga helix-turn-helix domain IRT44_04770 PF02378 Phosphotransferase system, EIIC IRT44_04770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_04775 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_04780 PF00398 Ribosomal RNA adenine dimethylase IRT44_04785 PF08241 Methyltransferase domain IRT44_04795 PF00072 Response regulator receiver domain IRT44_04795 PF00486 Transcriptional regulatory protein, C terminal IRT44_04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_04800 PF00672 HAMP domain IRT44_04800 PF00512 His Kinase A (phospho-acceptor) domain IRT44_04800 PF00989 PAS fold IRT44_04805 PF10415 Fumarase C C-terminus IRT44_04805 PF00206 Lyase IRT44_04810 PF00512 His Kinase A (phospho-acceptor) domain IRT44_04810 PF18698 Histidine kinase sensor domain IRT44_04810 PF00989 PAS fold IRT44_04810 PF00672 HAMP domain IRT44_04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_04820 PF01553 Acyltransferase IRT44_04820 PF00501 AMP-binding enzyme IRT44_04825 PF07690 Major Facilitator Superfamily IRT44_04830 PF01554 MatE IRT44_04835 PF08141 Small acid-soluble spore protein H family IRT44_04840 PF00664 ABC transporter transmembrane region IRT44_04840 PF00005 ABC transporter IRT44_04845 PF00664 ABC transporter transmembrane region IRT44_04845 PF00005 ABC transporter IRT44_04850 PF00005 ABC transporter IRT44_04855 PF01032 FecCD transport family IRT44_04860 PF01032 FecCD transport family IRT44_04875 PF03611 PTS system sugar-specific permease component IRT44_04880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_04885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_04890 PF06039 Malate:quinone oxidoreductase (Mqo) IRT44_04915 PF07690 Major Facilitator Superfamily IRT44_04920 PF07690 Major Facilitator Superfamily IRT44_04925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IRT44_04925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_04930 PF00440 Bacterial regulatory proteins, tetR family IRT44_04965 PF00665 Integrase core domain IRT44_04965 PF02796 Helix-turn-helix domain of resolvase IRT44_04970 PF01695 IstB-like ATP binding protein IRT44_04985 PF08279 HTH domain IRT44_04985 PF13280 WYL domain IRT44_04995 PF04542 Sigma-70 region 2 IRT44_04995 PF08281 Sigma-70, region 4 IRT44_04995 PF12680 SnoaL-like domain IRT44_05000 PF02590 Predicted SPOUT methyltransferase IRT44_05010 PF13091 PLD-like domain IRT44_05010 PF13396 Phospholipase_D-nuclease N-terminal IRT44_05015 PF13180 PDZ domain IRT44_05025 PF00753 Metallo-beta-lactamase superfamily IRT44_05030 PF09648 YycH protein IRT44_05040 PF00672 HAMP domain IRT44_05040 PF13426 PAS domain IRT44_05040 PF00512 His Kinase A (phospho-acceptor) domain IRT44_05040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_05045 PF00486 Transcriptional regulatory protein, C terminal IRT44_05045 PF00072 Response regulator receiver domain IRT44_05050 PF10145 Phage-related minor tail protein IRT44_05050 PF01464 Transglycosylase SLT domain IRT44_05050 PF01551 Peptidase family M23 IRT44_05065 PF00709 Adenylosuccinate synthetase IRT44_05075 PF03948 Ribosomal protein L9, C-terminal domain IRT44_05075 PF01281 Ribosomal protein L9, N-terminal domain IRT44_05080 PF01368 DHH family IRT44_05080 PF02272 DHHA1 domain IRT44_05090 PF01084 Ribosomal protein S18 IRT44_05095 PF00436 Single-strand binding protein family IRT44_05100 PF01250 Ribosomal protein S6 IRT44_05105 PF06071 Protein of unknown function (DUF933) IRT44_05105 PF01926 50S ribosome-binding GTPase IRT44_05110 PF01432 Peptidase family M3 IRT44_05110 PF08439 Oligopeptidase F IRT44_05120 PF06107 Bacterial protein of unknown function (DUF951) IRT44_05125 PF00924 Mechanosensitive ion channel IRT44_05135 PF06866 Protein of unknown function (DUF1256) IRT44_05140 PF00781 Diacylglycerol kinase catalytic domain IRT44_05145 PF01022 Bacterial regulatory protein, arsR family IRT44_05150 PF00892 EamA-like transporter family IRT44_05165 PF04474 Protein of unknown function (DUF554) IRT44_05170 PF00266 Aminotransferase class-V IRT44_05175 PF17762 HTH domain found in ParB protein IRT44_05175 PF02195 ParB-like nuclease domain IRT44_05180 PF13614 AAA domain IRT44_05185 PF02195 ParB-like nuclease domain IRT44_05185 PF17762 HTH domain found in ParB protein IRT44_05195 PF02527 rRNA small subunit methyltransferase G IRT44_05200 PF01134 Glucose inhibited division protein A IRT44_05200 PF13932 GidA associated domain IRT44_05205 PF01926 50S ribosome-binding GTPase IRT44_05205 PF12631 MnmE helical domain IRT44_05205 PF10396 GTP-binding protein TrmE N-terminus IRT44_05215 PF14804 Jag N-terminus IRT44_05215 PF01424 R3H domain IRT44_05220 PF02096 60Kd inner membrane protein IRT44_05225 PF01809 Putative membrane protein insertion efficiency factor IRT44_05230 PF00825 Ribonuclease P IRT44_05235 PF00468 Ribosomal protein L34 IRT44_05245 PF00712 DNA polymerase III beta subunit, N-terminal domain IRT44_05245 PF02767 DNA polymerase III beta subunit, central domain IRT44_05245 PF02768 DNA polymerase III beta subunit, C-terminal domain IRT44_05255 PF02463 RecF/RecN/SMC N terminal domain IRT44_05260 PF04025 Domain of unknown function (DUF370) IRT44_05265 PF00204 DNA gyrase B IRT44_05265 PF00986 DNA gyrase B subunit, carboxyl terminus IRT44_05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_05265 PF01751 Toprim domain IRT44_05270 PF07690 Major Facilitator Superfamily IRT44_05280 PF03989 DNA gyrase C-terminal domain, beta-propeller IRT44_05280 PF00521 DNA gyrase/topoisomerase IV, subunit A IRT44_05285 PF00072 Response regulator receiver domain IRT44_05305 PF14175 YaaC-like Protein IRT44_05310 PF00478 IMP dehydrogenase / GMP reductase domain IRT44_05310 PF00571 CBS domain IRT44_05320 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_05320 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_05325 PF01680 SOR/SNZ family IRT44_05330 PF01174 SNO glutamine amidotransferase family IRT44_05335 PF02403 Seryl-tRNA synthetase N-terminal domain IRT44_05335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_05345 PF01274 Malate synthase IRT44_05350 PF00463 Isocitrate lyase family IRT44_05385 PF01522 Polysaccharide deacetylase IRT44_05395 PF01638 HxlR-like helix-turn-helix IRT44_05425 PF02378 Phosphotransferase system, EIIC IRT44_05425 PF00367 phosphotransferase system, EIIB IRT44_05430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IRT44_05435 PF03123 CAT RNA binding domain IRT44_05435 PF00874 PRD domain IRT44_05445 PF05163 DinB family IRT44_05450 PF00881 Nitroreductase family IRT44_05455 PF14437 MafB19-like deaminase IRT44_05460 PF01479 S4 domain IRT44_05460 PF00849 RNA pseudouridylate synthase IRT44_05480 PF00042 Globin IRT44_05480 PF00175 Oxidoreductase NAD-binding domain IRT44_05480 PF00970 Oxidoreductase FAD-binding domain IRT44_05485 PF01966 HD domain IRT44_05495 PF00989 PAS fold IRT44_05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_05495 PF00512 His Kinase A (phospho-acceptor) domain IRT44_05505 PF02575 YbaB/EbfC DNA-binding family IRT44_05510 PF13662 Toprim domain IRT44_05510 PF02132 RecR protein IRT44_05525 PF07441 SigmaK-factor processing regulatory protein BofA IRT44_05545 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IRT44_05545 PF01276 Orn/Lys/Arg decarboxylase, major domain IRT44_05550 PF02223 Thymidylate kinase IRT44_05555 PF06153 Cyclic-di-AMP receptor IRT44_05560 PF03885 Protein of unknown function (DUF327) IRT44_05565 PF09115 DNA polymerase III, delta subunit, C terminal IRT44_05570 PF04468 PSP1 C-terminal conserved region IRT44_05575 PF06156 Initiation control protein YabA IRT44_05580 PF05175 Methyltransferase small domain IRT44_05585 PF01541 GIY-YIG catalytic domain IRT44_05590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_05595 PF18277 AbrB C-terminal domain IRT44_05595 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IRT44_05600 PF01588 Putative tRNA binding domain IRT44_05600 PF09334 tRNA synthetases class I (M) IRT44_05600 PF08264 Anticodon-binding domain of tRNA IRT44_05605 PF01026 TatD related DNase IRT44_05615 PF06725 3D domain IRT44_05615 PF03990 G5-linked-Ubiquitin-like domain IRT44_05615 PF07501 G5 domain IRT44_05620 PF13331 Domain of unknown function (DUF4093) IRT44_05620 PF13662 Toprim domain IRT44_05625 PF00398 Ribosomal RNA adenine dimethylase IRT44_05630 PF06257 Biofilm formation stimulator VEG IRT44_05635 PF00269 Small, acid-soluble spore proteins, alpha/beta type IRT44_05645 PF08544 GHMP kinases C terminal IRT44_05645 PF00288 GHMP kinases N terminal domain IRT44_05650 PF00156 Phosphoribosyl transferase domain IRT44_05650 PF09182 Bacterial purine repressor, N-terminal IRT44_05655 PF01042 Endoribonuclease L-PSP IRT44_05660 PF04026 SpoVG IRT44_05665 PF07683 Cobalamin synthesis protein cobW C-terminal domain IRT44_05665 PF02492 CobW/HypB/UreG, nucleotide-binding domain IRT44_05670 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_05670 PF12804 MobA-like NTP transferase domain IRT44_05675 PF14572 Phosphoribosyl synthetase-associated domain IRT44_05675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IRT44_05680 PF14693 Ribosomal protein TL5, C-terminal domain IRT44_05680 PF01386 Ribosomal L25p family IRT44_05685 PF01195 Peptidyl-tRNA hydrolase IRT44_05695 PF00270 DEAD/DEAH box helicase IRT44_05695 PF02559 CarD-like/TRCF domain IRT44_05695 PF00271 Helicase conserved C-terminal domain IRT44_05695 PF03461 TRCF domain IRT44_05695 PF17757 UvrB interaction domain IRT44_05700 PF05698 Bacterial trigger factor protein (TF) C-terminus IRT44_05705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin IRT44_05705 PF15714 Stage V sporulation protein T C-terminal, transcription factor IRT44_05710 PF14667 Polysaccharide biosynthesis C-terminal domain IRT44_05710 PF01943 Polysaccharide biosynthesis protein IRT44_05715 PF03819 MazG nucleotide pyrophosphohydrolase domain IRT44_05715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_05720 PF01479 S4 domain IRT44_05735 PF07873 YabP family IRT44_05750 PF00575 S1 RNA binding domain IRT44_05755 PF07228 Stage II sporulation protein E (SpoIIE) IRT44_05760 PF00092 von Willebrand factor type A domain IRT44_05765 PF00069 Protein kinase domain IRT44_05775 PF06738 Putative threonine/serine exporter IRT44_05775 PF12821 Threonine/Serine exporter, ThrE IRT44_05780 PF09179 TilS substrate binding domain IRT44_05780 PF01171 PP-loop family IRT44_05780 PF11734 TilS substrate C-terminal domain IRT44_05785 PF00156 Phosphoribosyl transferase domain IRT44_05790 PF01434 Peptidase family M41 IRT44_05790 PF06480 FtsH Extracellular IRT44_05790 PF17862 AAA+ lid domain IRT44_05790 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_05810 PF02445 Quinolinate synthetase A protein IRT44_05820 PF01297 Zinc-uptake complex component A periplasmic IRT44_05825 PF00005 ABC transporter IRT44_05830 PF00950 ABC 3 transport family IRT44_05835 PF01475 Ferric uptake regulator family IRT44_05840 PF00890 FAD binding domain IRT44_05840 PF02910 Fumarate reductase flavoprotein C-term IRT44_05845 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IRT44_05845 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IRT44_05850 PF03309 Type III pantothenate kinase IRT44_05880 PF01343 Peptidase family S49 IRT44_05900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_05905 PF00437 Type II/IV secretion system protein IRT44_06015 PF04542 Sigma-70 region 2 IRT44_06015 PF04539 Sigma-70 region 3 IRT44_06015 PF03979 Sigma-70 factor, region 1.1 IRT44_06015 PF04545 Sigma-70, region 4 IRT44_06015 PF00140 Sigma-70 factor, region 1.2 IRT44_06020 PF01430 Hsp33 protein IRT44_06025 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_06035 PF00117 Glutamine amidotransferase class-I IRT44_06045 PF02416 mttA/Hcf106 family IRT44_06050 PF01063 Amino-transferase class IV IRT44_06055 PF00809 Pterin binding enzyme IRT44_06060 PF02152 Dihydroneopterin aldolase IRT44_06065 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IRT44_06070 PF01381 Helix-turn-helix IRT44_06070 PF08671 Anti-repressor SinI IRT44_06075 PF01207 Dihydrouridine synthase (Dus) IRT44_06080 PF01272 Transcription elongation factor, GreA/GreB, C-term IRT44_06080 PF03449 Transcription elongation factor, N-terminal IRT44_06085 PF00152 tRNA synthetases class II (D, K and N) IRT44_06085 PF01336 OB-fold nucleic acid binding domain IRT44_06115 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase IRT44_06115 PF04101 Glycosyltransferase family 28 C-terminal domain IRT44_06120 PF13419 Haloacid dehalogenase-like hydrolase IRT44_06125 PF05848 CtsR N-terminal HTH domain IRT44_06125 PF17727 CtsR C-terminal dimerization domain IRT44_06130 PF02151 UvrB/uvrC motif IRT44_06135 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain IRT44_06140 PF02861 Clp amino terminal domain, pathogenicity island component IRT44_06140 PF07724 AAA domain (Cdc48 subfamily) IRT44_06140 PF10431 C-terminal, D2-small domain, of ClpB protein IRT44_06140 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_06140 PF17871 AAA lid domain IRT44_06145 PF18073 Rubredoxin metal binding domain IRT44_06155 PF01066 CDP-alcohol phosphatidyltransferase IRT44_06170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IRT44_06175 PF02542 YgbB family IRT44_06180 PF00749 tRNA synthetases class I (E and Q), catalytic domain IRT44_06185 PF06426 Serine acetyltransferase, N-terminal IRT44_06185 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_06190 PF01406 tRNA synthetases class I (C) catalytic domain IRT44_06190 PF09190 DALR domain IRT44_06195 PF00636 Ribonuclease III domain IRT44_06200 PF00588 SpoU rRNA Methylase family IRT44_06200 PF08032 RNA 2'-O ribose methyltransferase substrate binding IRT44_06205 PF05991 YacP-like NYN domain IRT44_06210 PF04542 Sigma-70 region 2 IRT44_06210 PF08281 Sigma-70, region 4 IRT44_06215 PF00471 Ribosomal protein L33 IRT44_06220 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IRT44_06225 PF02357 Transcription termination factor nusG IRT44_06225 PF00467 KOW motif IRT44_06230 PF00298 Ribosomal protein L11, RNA binding domain IRT44_06230 PF03946 Ribosomal protein L11, N-terminal domain IRT44_06235 PF00687 Ribosomal protein L1p/L10e family IRT44_06240 PF00466 Ribosomal protein L10 IRT44_06245 PF00542 Ribosomal protein L7/L12 C-terminal domain IRT44_06245 PF16320 Ribosomal protein L7/L12 dimerisation domain IRT44_06250 PF05175 Methyltransferase small domain IRT44_06255 PF04563 RNA polymerase beta subunit IRT44_06255 PF04561 RNA polymerase Rpb2, domain 2 IRT44_06255 PF04565 RNA polymerase Rpb2, domain 3 IRT44_06255 PF10385 RNA polymerase beta subunit external 1 domain IRT44_06255 PF04560 RNA polymerase Rpb2, domain 7 IRT44_06255 PF00562 RNA polymerase Rpb2, domain 6 IRT44_06260 PF04983 RNA polymerase Rpb1, domain 3 IRT44_06260 PF00623 RNA polymerase Rpb1, domain 2 IRT44_06260 PF04997 RNA polymerase Rpb1, domain 1 IRT44_06260 PF05000 RNA polymerase Rpb1, domain 4 IRT44_06260 PF04998 RNA polymerase Rpb1, domain 5 IRT44_06265 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family IRT44_06270 PF00164 Ribosomal protein S12/S23 IRT44_06275 PF00177 Ribosomal protein S7p/S5e IRT44_06280 PF03144 Elongation factor Tu domain 2 IRT44_06280 PF00009 Elongation factor Tu GTP binding domain IRT44_06280 PF14492 Elongation Factor G, domain II IRT44_06280 PF03764 Elongation factor G, domain IV IRT44_06280 PF00679 Elongation factor G C-terminus IRT44_06285 PF00009 Elongation factor Tu GTP binding domain IRT44_06285 PF03144 Elongation factor Tu domain 2 IRT44_06285 PF03143 Elongation factor Tu C-terminal domain IRT44_06300 PF00338 Ribosomal protein S10p/S20e IRT44_06305 PF00297 Ribosomal protein L3 IRT44_06310 PF00573 Ribosomal protein L4/L1 family IRT44_06315 PF00276 Ribosomal protein L23 IRT44_06320 PF03947 Ribosomal Proteins L2, C-terminal domain IRT44_06320 PF00181 Ribosomal Proteins L2, RNA binding domain IRT44_06325 PF00203 Ribosomal protein S19 IRT44_06330 PF00237 Ribosomal protein L22p/L17e IRT44_06335 PF00189 Ribosomal protein S3, C-terminal domain IRT44_06335 PF07650 KH domain IRT44_06340 PF00252 Ribosomal protein L16p/L10e IRT44_06345 PF00831 Ribosomal L29 protein IRT44_06350 PF00366 Ribosomal protein S17 IRT44_06355 PF00238 Ribosomal protein L14p/L23e IRT44_06360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IRT44_06360 PF00467 KOW motif IRT44_06365 PF00673 ribosomal L5P family C-terminus IRT44_06365 PF00281 Ribosomal protein L5 IRT44_06370 PF00253 Ribosomal protein S14p/S29e IRT44_06375 PF00410 Ribosomal protein S8 IRT44_06380 PF00347 Ribosomal protein L6 IRT44_06385 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IRT44_06390 PF00333 Ribosomal protein S5, N-terminal domain IRT44_06390 PF03719 Ribosomal protein S5, C-terminal domain IRT44_06395 PF00327 Ribosomal protein L30p/L7e IRT44_06400 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IRT44_06405 PF00344 SecY translocase IRT44_06410 PF05191 Adenylate kinase, active site lid IRT44_06415 PF00557 Metallopeptidase family M24 IRT44_06420 PF01176 Translation initiation factor 1A / IF-1 IRT44_06425 PF00444 Ribosomal protein L36 IRT44_06430 PF00416 Ribosomal protein S13/S18 IRT44_06435 PF00411 Ribosomal protein S11 IRT44_06440 PF01000 RNA polymerase Rpb3/RpoA insert domain IRT44_06440 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IRT44_06440 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IRT44_06445 PF01196 Ribosomal protein L17 IRT44_06450 PF00005 ABC transporter IRT44_06455 PF00005 ABC transporter IRT44_06460 PF02361 Cobalt transport protein IRT44_06465 PF01416 tRNA pseudouridine synthase IRT44_06470 PF00572 Ribosomal protein L13 IRT44_06475 PF00380 Ribosomal protein S9/S16 IRT44_06480 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_06485 PF10609 NUBPL iron-transfer P-loop NTPase IRT44_06500 PF01522 Polysaccharide deacetylase IRT44_06590 PF00491 Arginase family IRT44_06600 PF04542 Sigma-70 region 2 IRT44_06600 PF08281 Sigma-70, region 4 IRT44_06605 PF13490 Putative zinc-finger IRT44_06610 PF02457 DisA bacterial checkpoint controller nucleotide-binding IRT44_06620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_06620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_06620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_06620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_06625 PF01380 SIS domain IRT44_06630 PF11208 Protein of unknown function (DUF2992) IRT44_06635 PF13333 Integrase core domain IRT44_06635 PF00665 Integrase core domain IRT44_06635 PF13276 HTH-like domain IRT44_06640 PF01695 IstB-like ATP binding protein IRT44_06645 PF02796 Helix-turn-helix domain of resolvase IRT44_06645 PF00665 Integrase core domain IRT44_06660 PF00107 Zinc-binding dehydrogenase IRT44_06660 PF08240 Alcohol dehydrogenase GroES-like domain IRT44_06665 PF01638 HxlR-like helix-turn-helix IRT44_06670 PF04127 DNA / pantothenate metabolism flavoprotein IRT44_06670 PF02441 Flavoprotein IRT44_06685 PF01032 FecCD transport family IRT44_06690 PF01032 FecCD transport family IRT44_06695 PF00005 ABC transporter IRT44_06705 PF01872 RibD C-terminal domain IRT44_06710 PF07690 Major Facilitator Superfamily IRT44_06720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_06720 PF03466 LysR substrate binding domain IRT44_06725 PF01545 Cation efflux family IRT44_06725 PF16916 Dimerisation domain of Zinc Transporter IRT44_06755 PF00486 Transcriptional regulatory protein, C terminal IRT44_06755 PF00072 Response regulator receiver domain IRT44_06760 PF00512 His Kinase A (phospho-acceptor) domain IRT44_06760 PF00672 HAMP domain IRT44_06760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_06775 PF00072 Response regulator receiver domain IRT44_06775 PF04397 LytTr DNA-binding domain IRT44_06780 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain IRT44_06780 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain IRT44_06785 PF00144 Beta-lactamase IRT44_06790 PF00144 Beta-lactamase IRT44_06795 PF02678 Pirin IRT44_06795 PF17954 Quercetinase C-terminal cupin domain IRT44_06800 PF07681 DoxX IRT44_06805 PF02525 Flavodoxin-like fold IRT44_06810 PF01047 MarR family IRT44_06820 PF00294 pfkB family carbohydrate kinase IRT44_06825 PF04227 Indigoidine synthase A like protein IRT44_06830 PF00403 Heavy-metal-associated domain IRT44_06840 PF00403 Heavy-metal-associated domain IRT44_06855 PF12833 Helix-turn-helix domain IRT44_06855 PF00072 Response regulator receiver domain IRT44_06860 PF02743 Cache domain IRT44_06860 PF00672 HAMP domain IRT44_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_06860 PF06580 Histidine kinase IRT44_06870 PF00392 Bacterial regulatory proteins, gntR family IRT44_06870 PF07702 UTRA domain IRT44_06875 PF02378 Phosphotransferase system, EIIC IRT44_06875 PF00367 phosphotransferase system, EIIB IRT44_06880 PF16657 Maltogenic Amylase, C-terminal domain IRT44_06880 PF00128 Alpha amylase, catalytic domain IRT44_06890 PF13407 Periplasmic binding protein domain IRT44_06895 PF00005 ABC transporter IRT44_06905 PF02659 Putative manganese efflux pump IRT44_06910 PF00689 Cation transporting ATPase, C-terminus IRT44_06910 PF00690 Cation transporter/ATPase, N-terminus IRT44_06915 PF09560 Sporulation protein YunB (Spo_YunB) IRT44_06920 PF07833 Copper amine oxidase N-terminal domain IRT44_06935 PF07730 Histidine kinase IRT44_06935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_06940 PF00196 Bacterial regulatory proteins, luxR family IRT44_06940 PF00072 Response regulator receiver domain IRT44_06950 PF09125 Cytochrome C oxidase subunit II, transmembrane IRT44_06950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IRT44_06955 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_06965 PF00881 Nitroreductase family IRT44_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_06970 PF16736 Single Cache-like IRT44_06970 PF00989 PAS fold IRT44_06970 PF00512 His Kinase A (phospho-acceptor) domain IRT44_06975 PF00486 Transcriptional regulatory protein, C terminal IRT44_06975 PF00072 Response regulator receiver domain IRT44_06990 PF02447 GntP family permease IRT44_06995 PF02595 Glycerate kinase family IRT44_07000 PF02743 Cache domain IRT44_07000 PF00672 HAMP domain IRT44_07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_07005 PF05651 Putative sugar diacid recognition IRT44_07005 PF13556 PucR C-terminal helix-turn-helix domain IRT44_07005 PF17853 GGDEF-like domain IRT44_07010 PF00471 Ribosomal protein L33 IRT44_07015 PF00999 Sodium/hydrogen exchanger family IRT44_07020 PF07827 KNTase C-terminal domain IRT44_07035 PF01037 Lrp/AsnC ligand binding domain IRT44_07040 PF12706 Beta-lactamase superfamily domain IRT44_07045 PF00082 Subtilase family IRT44_07060 PF00574 Clp protease IRT44_07075 PF13860 FlgD Ig-like domain IRT44_07075 PF05922 Peptidase inhibitor I9 IRT44_07075 PF02225 PA domain IRT44_07075 PF00082 Subtilase family IRT44_07085 PF03466 LysR substrate binding domain IRT44_07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_07090 PF00285 Citrate synthase, C-terminal domain IRT44_07095 PF08220 DeoR-like helix-turn-helix domain IRT44_07095 PF00455 DeoR C terminal sensor domain IRT44_07100 PF00294 pfkB family carbohydrate kinase IRT44_07105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IRT44_07105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_07110 PF00381 PTS HPr component phosphorylation site IRT44_07125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IRT44_07135 PF10055 Uncharacterized small protein (DUF2292) IRT44_07160 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_07160 PF17863 AAA lid domain IRT44_07170 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_07175 PF00581 Rhodanese-like domain IRT44_07175 PF01206 Sulfurtransferase TusA IRT44_07180 PF02630 SCO1/SenC IRT44_07190 PF17770 Ribonuclease J C-terminal domain IRT44_07190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IRT44_07190 PF00753 Metallo-beta-lactamase superfamily IRT44_07195 PF06491 Disulphide isomerase IRT44_07200 PF00248 Aldo/keto reductase family IRT44_07205 PF00891 O-methyltransferase domain IRT44_07210 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_07215 PF09383 NIL domain IRT44_07215 PF00005 ABC transporter IRT44_07220 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07225 PF03180 NLPA lipoprotein IRT44_07230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_07245 PF08239 Bacterial SH3 domain IRT44_07245 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_07255 PF12849 PBP superfamily domain IRT44_07260 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07265 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07270 PF00005 ABC transporter IRT44_07275 PF00005 ABC transporter IRT44_07280 PF02040 Arsenical pump membrane protein IRT44_07295 PF00732 GMC oxidoreductase IRT44_07295 PF05199 GMC oxidoreductase IRT44_07300 PF01022 Bacterial regulatory protein, arsR family IRT44_07315 PF01648 4'-phosphopantetheinyl transferase superfamily IRT44_07330 PF00842 Alanine racemase, C-terminal domain IRT44_07330 PF01168 Alanine racemase, N-terminal domain IRT44_07335 PF01402 Ribbon-helix-helix protein, copG family IRT44_07340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system IRT44_07345 PF13581 Histidine kinase-like ATPase domain IRT44_07350 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain IRT44_07350 PF07228 Stage II sporulation protein E (SpoIIE) IRT44_07355 PF01740 STAS domain IRT44_07360 PF13581 Histidine kinase-like ATPase domain IRT44_07365 PF04545 Sigma-70, region 4 IRT44_07365 PF04539 Sigma-70 region 3 IRT44_07365 PF04542 Sigma-70 region 2 IRT44_07370 PF17674 HHH domain IRT44_07370 PF16921 Tex protein YqgF-like domain IRT44_07370 PF09371 Tex-like protein N-terminal domain IRT44_07370 PF00575 S1 RNA binding domain IRT44_07385 PF10263 SprT-like family IRT44_07385 PF17283 SprT-like zinc ribbon domain IRT44_07390 PF00586 AIR synthase related protein, N-terminal domain IRT44_07390 PF02769 AIR synthase related protein, C-terminal domain IRT44_07395 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IRT44_07400 PF00814 Glycoprotease family IRT44_07405 PF00583 Acetyltransferase (GNAT) family IRT44_07410 PF00814 Glycoprotease family IRT44_07420 PF12848 ABC transporter IRT44_07420 PF16326 ABC transporter C-terminal domain IRT44_07420 PF00005 ABC transporter IRT44_07425 PF01812 5-formyltetrahydrofolate cyclo-ligase family IRT44_07430 PF01967 MoaC family IRT44_07430 PF00994 Probable molybdopterin binding domain IRT44_07435 PF02464 Competence-damaged protein IRT44_07435 PF00994 Probable molybdopterin binding domain IRT44_07440 PF02416 mttA/Hcf106 family IRT44_07445 PF00902 Sec-independent protein translocase protein (TatC) IRT44_07455 PF13333 Integrase core domain IRT44_07455 PF00665 Integrase core domain IRT44_07455 PF13276 HTH-like domain IRT44_07465 PF00188 Cysteine-rich secretory protein family IRT44_07470 PF00166 Chaperonin 10 Kd subunit IRT44_07475 PF00118 TCP-1/cpn60 chaperonin family IRT44_07480 PF13416 Bacterial extracellular solute-binding protein IRT44_07485 PF14785 Maltose transport system permease protein MalF P2 domain IRT44_07485 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07490 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07625 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_07625 PF17863 AAA lid domain IRT44_07635 PF13559 Domain of unknown function (DUF4129) IRT44_07635 PF11992 Domain of unknown function (DUF3488) IRT44_07635 PF01841 Transglutaminase-like superfamily IRT44_07640 PF02540 NAD synthase IRT44_07640 PF00958 GMP synthase C terminal domain IRT44_07640 PF00117 Glutamine amidotransferase class-I IRT44_07645 PF00860 Permease family IRT44_07650 PF00731 AIR carboxylase IRT44_07655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IRT44_07655 PF02222 ATP-grasp domain IRT44_07660 PF00206 Lyase IRT44_07660 PF10397 Adenylosuccinate lyase C-terminus IRT44_07670 PF13333 Integrase core domain IRT44_07670 PF00665 Integrase core domain IRT44_07670 PF13276 HTH-like domain IRT44_07675 PF01695 IstB-like ATP binding protein IRT44_07690 PF00005 ABC transporter IRT44_07695 PF07291 Methylamine utilisation protein MauE IRT44_07705 PF00005 ABC transporter IRT44_07720 PF00486 Transcriptional regulatory protein, C terminal IRT44_07720 PF00072 Response regulator receiver domain IRT44_07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_07730 PF00005 ABC transporter IRT44_07735 PF02687 FtsX-like permease family IRT44_07745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_07750 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07755 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_07755 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_07760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_07760 PF00005 ABC transporter IRT44_07765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_07765 PF00005 ABC transporter IRT44_07770 PF02417 Chromate transporter IRT44_07775 PF02417 Chromate transporter IRT44_07785 PF06750 Bacterial Peptidase A24 N-terminal domain IRT44_07785 PF01478 Type IV leader peptidase family IRT44_07795 PF02954 Bacterial regulatory protein, Fis family IRT44_07795 PF00072 Response regulator receiver domain IRT44_07795 PF00158 Sigma-54 interaction domain IRT44_07800 PF00437 Type II/IV secretion system protein IRT44_07805 PF00482 Type II secretion system (T2SS), protein F IRT44_07820 PF00092 von Willebrand factor type A domain IRT44_07825 PF00092 von Willebrand factor type A domain IRT44_07830 PF00092 von Willebrand factor type A domain IRT44_07855 PF00092 von Willebrand factor type A domain IRT44_07870 PF00092 von Willebrand factor type A domain IRT44_07880 PF02073 Thermophilic metalloprotease (M29) IRT44_07885 PF00465 Iron-containing alcohol dehydrogenase IRT44_07895 PF01259 SAICAR synthetase IRT44_07900 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase IRT44_07910 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IRT44_07910 PF02769 AIR synthase related protein, C-terminal domain IRT44_07910 PF00586 AIR synthase related protein, N-terminal domain IRT44_07915 PF00156 Phosphoribosyl transferase domain IRT44_07920 PF02769 AIR synthase related protein, C-terminal domain IRT44_07920 PF00586 AIR synthase related protein, N-terminal domain IRT44_07925 PF00551 Formyl transferase IRT44_07940 PF02142 MGS-like domain IRT44_07940 PF01808 AICARFT/IMPCHase bienzyme IRT44_07945 PF02844 Phosphoribosylglycinamide synthetase, N domain IRT44_07945 PF02843 Phosphoribosylglycinamide synthetase, C domain IRT44_07945 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IRT44_07960 PF13382 Adenine deaminase C-terminal domain IRT44_07960 PF01979 Amidohydrolase family IRT44_07965 PF02653 Branched-chain amino acid transport system / permease component IRT44_07970 PF11862 Domain of unknown function (DUF3382) IRT44_07970 PF02653 Branched-chain amino acid transport system / permease component IRT44_07975 PF00005 ABC transporter IRT44_07975 PF12399 Branched-chain amino acid ATP-binding cassette transporter IRT44_07980 PF00005 ABC transporter IRT44_08000 PF07690 Major Facilitator Superfamily IRT44_08005 PF13411 MerR HTH family regulatory protein IRT44_08010 PF01614 Bacterial transcriptional regulator IRT44_08010 PF09339 IclR helix-turn-helix domain IRT44_08020 PF00005 ABC transporter IRT44_08020 PF08402 TOBE domain IRT44_08025 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_08030 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_08035 PF01546 Peptidase family M20/M25/M40 IRT44_08035 PF07687 Peptidase dimerisation domain IRT44_08040 PF13458 Periplasmic binding protein IRT44_08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_08045 PF00512 His Kinase A (phospho-acceptor) domain IRT44_08045 PF00672 HAMP domain IRT44_08050 PF00072 Response regulator receiver domain IRT44_08050 PF00486 Transcriptional regulatory protein, C terminal IRT44_08055 PF11258 Protein of unknown function (DUF3048) N-terminal domain IRT44_08055 PF17479 Protein of unknown function (DUF3048) C-terminal domain IRT44_08060 PF01371 Trp repressor protein IRT44_08065 PF01884 PcrB family IRT44_08075 PF03009 Glycerophosphoryl diester phosphodiesterase family IRT44_08085 PF00580 UvrD/REP helicase N-terminal domain IRT44_08085 PF13361 UvrD-like helicase C-terminal domain IRT44_08090 PF00533 BRCA1 C Terminus (BRCT) domain IRT44_08090 PF03120 NAD-dependent DNA ligase OB-fold domain IRT44_08090 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IRT44_08090 PF12826 Helix-hairpin-helix motif IRT44_08090 PF01653 NAD-dependent DNA ligase adenylation domain IRT44_08105 PF00171 Aldehyde dehydrogenase family IRT44_08110 PF03707 Bacterial signalling protein N terminal repeat IRT44_08110 PF00563 EAL domain IRT44_08110 PF00990 Diguanylate cyclase, GGDEF domain IRT44_08115 PF02666 Phosphatidylserine decarboxylase IRT44_08120 PF02686 Glu-tRNAGln amidotransferase C subunit IRT44_08125 PF01425 Amidase IRT44_08130 PF02934 GatB/GatE catalytic domain IRT44_08130 PF02637 GatB domain IRT44_08145 PF00005 ABC transporter IRT44_08150 PF12679 ABC-2 family transporter protein IRT44_08155 PF00480 ROK family IRT44_08160 PF00781 Diacylglycerol kinase catalytic domain IRT44_08165 PF01938 TRAM domain IRT44_08165 PF05958 tRNA (Uracil-5-)-methyltransferase IRT44_08175 PF00872 Transposase, Mutator family IRT44_08190 PF01695 IstB-like ATP binding protein IRT44_08195 PF00665 Integrase core domain IRT44_08195 PF02796 Helix-turn-helix domain of resolvase IRT44_08200 PF12728 Helix-turn-helix domain IRT44_08215 PF00378 Enoyl-CoA hydratase/isomerase IRT44_08220 PF13302 Acetyltransferase (GNAT) domain IRT44_08230 PF00356 Bacterial regulatory proteins, lacI family IRT44_08235 PF05853 beta-keto acid cleavage enzyme IRT44_08240 PF02558 Ketopantoate reductase PanE/ApbA IRT44_08240 PF08546 Ketopantoate reductase PanE/ApbA C terminal IRT44_08245 PF02447 GntP family permease IRT44_08255 PF08818 Domain of unknown function (DU1801) IRT44_08265 PF08818 Domain of unknown function (DU1801) IRT44_08275 PF02311 AraC-like ligand binding domain IRT44_08275 PF12833 Helix-turn-helix domain IRT44_08280 PF13458 Periplasmic binding protein IRT44_08285 PF02653 Branched-chain amino acid transport system / permease component IRT44_08290 PF02653 Branched-chain amino acid transport system / permease component IRT44_08290 PF11862 Domain of unknown function (DUF3382) IRT44_08295 PF12399 Branched-chain amino acid ATP-binding cassette transporter IRT44_08295 PF00005 ABC transporter IRT44_08300 PF00005 ABC transporter IRT44_08305 PF00491 Arginase family IRT44_08310 PF17392 Urocanase C-terminal domain IRT44_08310 PF17391 Urocanase N-terminal domain IRT44_08310 PF01175 Urocanase Rossmann-like domain IRT44_08315 PF01979 Amidohydrolase family IRT44_08320 PF01497 Periplasmic binding protein IRT44_08320 PF12833 Helix-turn-helix domain IRT44_08325 PF01497 Periplasmic binding protein IRT44_08330 PF00756 Putative esterase IRT44_08335 PF00106 short chain dehydrogenase IRT44_08340 PF00425 chorismate binding enzyme IRT44_08345 PF13193 AMP-binding enzyme C-terminal domain IRT44_08345 PF00501 AMP-binding enzyme IRT44_08350 PF00550 Phosphopantetheine attachment site IRT44_08350 PF00857 Isochorismatase family IRT44_08355 PF13193 AMP-binding enzyme C-terminal domain IRT44_08355 PF00501 AMP-binding enzyme IRT44_08355 PF00550 Phosphopantetheine attachment site IRT44_08355 PF00975 Thioesterase domain IRT44_08355 PF00668 Condensation domain IRT44_08360 PF03621 MbtH-like protein IRT44_08365 PF01648 4'-phosphopantetheinyl transferase superfamily IRT44_08375 PF00474 Sodium:solute symporter family IRT44_08380 PF00491 Arginase family IRT44_08385 PF00202 Aminotransferase class-III IRT44_08390 PF00158 Sigma-54 interaction domain IRT44_08395 PF07486 Cell Wall Hydrolase IRT44_08415 PF03965 Penicillinase repressor IRT44_08420 PF01435 Peptidase family M48 IRT44_08425 PF07681 DoxX IRT44_08430 PF00753 Metallo-beta-lactamase superfamily IRT44_08440 PF00375 Sodium:dicarboxylate symporter family IRT44_08445 PF04204 Homoserine O-succinyltransferase IRT44_08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_08450 PF03466 LysR substrate binding domain IRT44_08455 PF03788 LrgA family IRT44_08460 PF04172 LrgB-like family IRT44_08470 PF01266 FAD dependent oxidoreductase IRT44_08475 PF00011 Hsp20/alpha crystallin family IRT44_08485 PF02535 ZIP Zinc transporter IRT44_08490 PF01618 MotA/TolQ/ExbB proton channel family IRT44_08495 PF00691 OmpA family IRT44_08495 PF13677 Membrane MotB of proton-channel complex MotA/MotB IRT44_08500 PF01638 HxlR-like helix-turn-helix IRT44_08505 PF01965 DJ-1/PfpI family IRT44_08520 PF00665 Integrase core domain IRT44_08520 PF02796 Helix-turn-helix domain of resolvase IRT44_08525 PF01695 IstB-like ATP binding protein IRT44_08540 PF01451 Low molecular weight phosphotyrosine protein phosphatase IRT44_08545 PF00989 PAS fold IRT44_08545 PF00512 His Kinase A (phospho-acceptor) domain IRT44_08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_08550 PF00158 Sigma-54 interaction domain IRT44_08550 PF00072 Response regulator receiver domain IRT44_08550 PF02954 Bacterial regulatory protein, Fis family IRT44_08555 PF02667 Short chain fatty acid transporter IRT44_08560 PF00571 CBS domain IRT44_08560 PF01595 Cyclin M transmembrane N-terminal domain IRT44_08560 PF03471 Transporter associated domain IRT44_08600 PF12704 MacB-like periplasmic core domain IRT44_08600 PF02687 FtsX-like permease family IRT44_08605 PF00005 ABC transporter IRT44_08610 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_08615 PF00342 Phosphoglucose isomerase IRT44_08620 PF12728 Helix-turn-helix domain IRT44_08625 PF01266 FAD dependent oxidoreductase IRT44_08635 PF08868 YugN-like family IRT44_08640 PF00293 NUDIX domain IRT44_08645 PF01513 ATP-NAD kinase IRT44_08655 PF13307 Helicase C-terminal domain IRT44_08655 PF04851 Type III restriction enzyme, res subunit IRT44_08655 PF00929 Exonuclease IRT44_08665 PF00909 Ammonium Transporter Family IRT44_08680 PF01751 Toprim domain IRT44_08690 PF02673 Bacitracin resistance protein BacA IRT44_08695 PF17783 CvfB-like winged helix domain IRT44_08695 PF13509 S1 domain IRT44_08715 PF16868 NMT1-like family IRT44_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_08725 PF08664 YcbB domain IRT44_08725 PF00072 Response regulator receiver domain IRT44_08730 PF10776 Protein of unknown function (DUF2600) IRT44_08755 PF07995 Glucose / Sorbosone dehydrogenase IRT44_08760 PF02954 Bacterial regulatory protein, Fis family IRT44_08760 PF00072 Response regulator receiver domain IRT44_08760 PF00158 Sigma-54 interaction domain IRT44_08765 PF01619 Proline dehydrogenase IRT44_08770 PF00730 HhH-GPD superfamily base excision DNA repair protein IRT44_08775 PF05525 Branched-chain amino acid transport protein IRT44_08780 PF00892 EamA-like transporter family IRT44_08795 PF17284 Spermidine synthase tetramerisation domain IRT44_08800 PF00005 ABC transporter IRT44_08810 PF00486 Transcriptional regulatory protein, C terminal IRT44_08810 PF00072 Response regulator receiver domain IRT44_08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_08815 PF00512 His Kinase A (phospho-acceptor) domain IRT44_08820 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_08820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_08835 PF02638 Glycosyl hydrolase-like 10 IRT44_08840 PF01048 Phosphorylase superfamily IRT44_08845 PF02621 Menaquinone biosynthesis IRT44_08855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_08875 PF05958 tRNA (Uracil-5-)-methyltransferase IRT44_08875 PF01938 TRAM domain IRT44_08885 PF00585 C-terminal regulatory domain of Threonine dehydratase IRT44_08885 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_08895 PF02073 Thermophilic metalloprotease (M29) IRT44_08905 PF02632 BioY family IRT44_08910 PF00067 Cytochrome P450 IRT44_08915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_08915 PF00512 His Kinase A (phospho-acceptor) domain IRT44_08915 PF00989 PAS fold IRT44_08915 PF16736 Single Cache-like IRT44_08920 PF00072 Response regulator receiver domain IRT44_08920 PF00486 Transcriptional regulatory protein, C terminal IRT44_08925 PF00877 NlpC/P60 family IRT44_08935 PF04012 PspA/IM30 family IRT44_08940 PF00398 Ribosomal RNA adenine dimethylase IRT44_08945 PF09922 Cell wall-active antibiotics response 4TMS YvqF IRT44_08950 PF07730 Histidine kinase IRT44_08950 PF00672 HAMP domain IRT44_08950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_08955 PF00196 Bacterial regulatory proteins, luxR family IRT44_08955 PF00072 Response regulator receiver domain IRT44_08965 PF00149 Calcineurin-like phosphoesterase IRT44_08980 PF01925 Sulfite exporter TauE/SafE IRT44_08985 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IRT44_08985 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IRT44_08990 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase IRT44_08995 PF04307 LexA-binding, inner membrane-associated putative hydrolase IRT44_09005 PF00633 Helix-hairpin-helix motif IRT44_09005 PF00730 HhH-GPD superfamily base excision DNA repair protein IRT44_09005 PF14815 NUDIX domain IRT44_09030 PF00583 Acetyltransferase (GNAT) family IRT44_09035 PF04167 Protein of unknown function (DUF402) IRT44_09040 PF00005 ABC transporter IRT44_09040 PF00664 ABC transporter transmembrane region IRT44_09045 PF07690 Major Facilitator Superfamily IRT44_09050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IRT44_09050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_09055 PF04298 Putative neutral zinc metallopeptidase IRT44_09060 PF00310 Glutamine amidotransferases class-II IRT44_09060 PF04898 Glutamate synthase central domain IRT44_09060 PF01645 Conserved region in glutamate synthase IRT44_09060 PF01493 GXGXG motif IRT44_09070 PF00202 Aminotransferase class-III IRT44_09075 PF00005 ABC transporter IRT44_09095 PF17418 Sporulation delaying protein SdpA IRT44_09110 PF12822 ECF transporter, substrate-specific component IRT44_09115 PF03129 Anticodon binding domain IRT44_09115 PF09180 Prolyl-tRNA synthetase, C-terminal IRT44_09115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_09120 PF13419 Haloacid dehalogenase-like hydrolase IRT44_09130 PF00578 AhpC/TSA family IRT44_09135 PF05343 M42 glutamyl aminopeptidase IRT44_09145 PF01923 Cobalamin adenosyltransferase IRT44_09155 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family IRT44_09160 PF10576 Iron-sulfur binding domain of endonuclease III IRT44_09160 PF00633 Helix-hairpin-helix motif IRT44_09160 PF00730 HhH-GPD superfamily base excision DNA repair protein IRT44_09165 PF01475 Ferric uptake regulator family IRT44_09170 PF00704 Glycosyl hydrolases family 18 IRT44_09175 PF11023 Zinc-ribbon containing domain IRT44_09265 PF01814 Hemerythrin HHE cation binding domain IRT44_09265 PF04405 Domain of Unknown function (DUF542) IRT44_09270 PF14256 YwiC-like protein IRT44_09275 PF01814 Hemerythrin HHE cation binding domain IRT44_09275 PF04405 Domain of Unknown function (DUF542) IRT44_09280 PF04343 Protein of unknown function, DUF488 IRT44_09285 PF00027 Cyclic nucleotide-binding domain IRT44_09285 PF00325 Bacterial regulatory proteins, crp family IRT44_09295 PF14710 Respiratory nitrate reductase alpha N-terminal IRT44_09295 PF01568 Molydopterin dinucleotide binding domain IRT44_09295 PF00384 Molybdopterin oxidoreductase IRT44_09300 PF14711 Respiratory nitrate reductase beta C-terminal IRT44_09300 PF13247 4Fe-4S dicluster domain IRT44_09305 PF02613 Nitrate reductase delta subunit IRT44_09310 PF02665 Nitrate reductase gamma subunit IRT44_09315 PF07690 Major Facilitator Superfamily IRT44_09325 PF04055 Radical SAM superfamily IRT44_09325 PF13186 Iron-sulfur cluster-binding domain IRT44_09330 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_09335 PF00994 Probable molybdopterin binding domain IRT44_09335 PF03454 MoeA C-terminal region (domain IV) IRT44_09335 PF03453 MoeA N-terminal region (domain I and II) IRT44_09340 PF00860 Permease family IRT44_09350 PF00075 RNase H IRT44_09355 PF08331 Domain of unknown function (DUF1730) IRT44_09360 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IRT44_09360 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IRT44_09365 PF12671 Putative amidase domain IRT44_09370 PF00588 SpoU rRNA Methylase family IRT44_09375 PF13419 Haloacid dehalogenase-like hydrolase IRT44_09380 PF08298 PrkA AAA domain IRT44_09380 PF06798 PrkA serine protein kinase C-terminal domain IRT44_09385 PF04285 Protein of unknown function (DUF444) IRT44_09395 PF00483 Nucleotidyl transferase IRT44_09400 PF13439 Glycosyltransferase Family 4 IRT44_09400 PF00534 Glycosyl transferases group 1 IRT44_09410 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_09410 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_09410 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_09410 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_09415 PF01238 Phosphomannose isomerase type I IRT44_09425 PF00072 Response regulator receiver domain IRT44_09425 PF04397 LytTr DNA-binding domain IRT44_09430 PF00072 Response regulator receiver domain IRT44_09430 PF01966 HD domain IRT44_09435 PF16363 GDP-mannose 4,6 dehydratase IRT44_09475 PF01037 Lrp/AsnC ligand binding domain IRT44_09480 PF00155 Aminotransferase class I and II IRT44_09485 PF00324 Amino acid permease IRT44_09495 PF00005 ABC transporter IRT44_09495 PF08402 TOBE domain IRT44_09500 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_09505 PF13344 Haloacid dehalogenase-like hydrolase IRT44_09510 PF04309 Glycerol-3-phosphate responsive antiterminator IRT44_09515 PF01266 FAD dependent oxidoreductase IRT44_09515 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IRT44_09525 PF00561 alpha/beta hydrolase fold IRT44_09540 PF01695 IstB-like ATP binding protein IRT44_09545 PF02796 Helix-turn-helix domain of resolvase IRT44_09545 PF00665 Integrase core domain IRT44_09560 PF00171 Aldehyde dehydrogenase family IRT44_09565 PF08666 SAF domain IRT44_09565 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IRT44_09570 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus IRT44_09570 PF08666 SAF domain IRT44_09575 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_09625 PF10960 BhlA holin family IRT44_09635 PF00210 Ferritin-like domain IRT44_09640 PF12804 MobA-like NTP transferase domain IRT44_09645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_09650 PF02634 FdhD/NarQ family IRT44_09655 PF07690 Major Facilitator Superfamily IRT44_09660 PF10057 Uncharacterized conserved protein (DUF2294) IRT44_09665 PF03453 MoeA N-terminal region (domain I and II) IRT44_09665 PF00994 Probable molybdopterin binding domain IRT44_09665 PF03454 MoeA C-terminal region (domain IV) IRT44_09670 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IRT44_09680 PF02673 Bacitracin resistance protein BacA IRT44_09685 PF07681 DoxX IRT44_09700 PF04241 Protein of unknown function (DUF423) IRT44_09710 PF04293 SpoVR like protein IRT44_09725 PF07690 Major Facilitator Superfamily IRT44_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_09730 PF03466 LysR substrate binding domain IRT44_09740 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IRT44_09745 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_09750 PF00510 Cytochrome c oxidase subunit III IRT44_09760 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_09765 PF07690 Major Facilitator Superfamily IRT44_09775 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IRT44_09775 PF12557 Cob(I)alamin adenosyltransferase N terminal IRT44_09780 PF00155 Aminotransferase class I and II IRT44_09790 PF02654 Cobalamin-5-phosphate synthase IRT44_09800 PF03186 CobD/Cbib protein IRT44_09805 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IRT44_09805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_09810 PF01903 CbiX IRT44_09815 PF02571 Precorrin-6x reductase CbiJ/CobK IRT44_09820 PF02570 Precorrin-8X methylmutase IRT44_09825 PF01888 CbiD IRT44_09830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_09835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_09840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_09845 PF11760 Cobalamin synthesis G N-terminal IRT44_09845 PF11761 Cobalamin biosynthesis central region IRT44_09845 PF01890 Cobalamin synthesis G C-terminus IRT44_09850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_09850 PF07685 CobB/CobQ-like glutamine amidotransferase domain IRT44_09855 PF07685 CobB/CobQ-like glutamine amidotransferase domain IRT44_09855 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_09860 PF02277 Phosphoribosyltransferase IRT44_09865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_09870 PF14824 Sirohaem biosynthesis protein central IRT44_09870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IRT44_09870 PF10414 Sirohaem synthase dimerisation region IRT44_09875 PF02954 Bacterial regulatory protein, Fis family IRT44_09875 PF00072 Response regulator receiver domain IRT44_09875 PF00158 Sigma-54 interaction domain IRT44_09880 PF03812 2-keto-3-deoxygluconate permease IRT44_09885 PF17042 Nucleotide-binding C-terminal domain IRT44_09885 PF07005 Sugar-binding N-terminal domain IRT44_09905 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_09915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_09920 PF00392 Bacterial regulatory proteins, gntR family IRT44_09920 PF07729 FCD domain IRT44_09925 PF08442 ATP-grasp domain IRT44_09925 PF00549 CoA-ligase IRT44_09930 PF02629 CoA binding domain IRT44_09930 PF00549 CoA-ligase IRT44_09940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IRT44_09945 PF00890 FAD binding domain IRT44_09945 PF02910 Fumarate reductase flavoprotein C-term IRT44_09950 PF13085 2Fe-2S iron-sulfur cluster binding domain IRT44_09950 PF13183 4Fe-4S dicluster domain IRT44_09955 PF05681 Fumarate hydratase (Fumerase) IRT44_09965 PF03328 HpcH/HpaI aldolase/citrate lyase family IRT44_09970 PF00893 Small Multidrug Resistance protein IRT44_09975 PF00893 Small Multidrug Resistance protein IRT44_09980 PF03099 Biotin/lipoate A/B protein ligase family IRT44_09980 PF10437 Bacterial lipoate protein ligase C-terminus IRT44_09985 PF00375 Sodium:dicarboxylate symporter family IRT44_09990 PF00591 Glycosyl transferase family, a/b domain IRT44_09990 PF02885 Glycosyl transferase family, helical bundle domain IRT44_09995 PF08327 Activator of Hsp90 ATPase homolog 1-like protein IRT44_10000 PF01022 Bacterial regulatory protein, arsR family IRT44_10005 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_10010 PF17203 Single cache domain 3 IRT44_10010 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_10015 PF08279 HTH domain IRT44_10015 PF00072 Response regulator receiver domain IRT44_10020 PF02016 LD-carboxypeptidase N-terminal domain IRT44_10020 PF17676 LD-carboxypeptidase C-terminal domain IRT44_10025 PF00210 Ferritin-like domain IRT44_10030 PF00485 Phosphoribulokinase / Uridine kinase family IRT44_10035 PF04463 Protein of unknown function (DUF523) IRT44_10040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IRT44_10040 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IRT44_10045 PF01418 Helix-turn-helix domain, rpiR family IRT44_10045 PF01380 SIS domain IRT44_10050 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IRT44_10050 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IRT44_10055 PF02447 GntP family permease IRT44_10060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_10060 PF03466 LysR substrate binding domain IRT44_10065 PF00860 Permease family IRT44_10090 PF00579 tRNA synthetases class I (W and Y) IRT44_10100 PF01546 Peptidase family M20/M25/M40 IRT44_10100 PF07687 Peptidase dimerisation domain IRT44_10105 PF11755 Protein of unknown function (DUF3311) IRT44_10110 PF00474 Sodium:solute symporter family IRT44_10130 PF01979 Amidohydrolase family IRT44_10135 PF00872 Transposase, Mutator family IRT44_10140 PF02796 Helix-turn-helix domain of resolvase IRT44_10140 PF00665 Integrase core domain IRT44_10145 PF01695 IstB-like ATP binding protein IRT44_10150 PF01418 Helix-turn-helix domain, rpiR family IRT44_10150 PF01380 SIS domain IRT44_10155 PF00144 Beta-lactamase IRT44_10160 PF01547 Bacterial extracellular solute-binding protein IRT44_10165 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_10170 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_10175 PF01869 BadF/BadG/BcrA/BcrD ATPase family IRT44_10190 PF07694 5TMR of 5TMR-LYT IRT44_10190 PF00990 Diguanylate cyclase, GGDEF domain IRT44_10195 PF03553 Na+/H+ antiporter family IRT44_10215 PF01547 Bacterial extracellular solute-binding protein IRT44_10220 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_10225 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_10230 PF10518 TAT (twin-arginine translocation) pathway signal sequence IRT44_10230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_10260 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_10270 PF10417 C-terminal domain of 1-Cys peroxiredoxin IRT44_10270 PF00578 AhpC/TSA family IRT44_10290 PF14398 YheC/D like ATP-grasp IRT44_10295 PF14398 YheC/D like ATP-grasp IRT44_10300 PF14398 YheC/D like ATP-grasp IRT44_10305 PF04286 Protein of unknown function (DUF445) IRT44_10310 PF00571 CBS domain IRT44_10310 PF07085 DRTGG domain IRT44_10310 PF00392 Bacterial regulatory proteins, gntR family IRT44_10310 PF03061 Thioesterase superfamily IRT44_10315 PF01022 Bacterial regulatory protein, arsR family IRT44_10325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IRT44_10325 PF02811 PHP domain IRT44_10325 PF01336 OB-fold nucleic acid binding domain IRT44_10325 PF07733 Bacterial DNA polymerase III alpha NTPase domain IRT44_10325 PF14579 Helix-hairpin-helix motif IRT44_10330 PF00390 Malic enzyme, N-terminal domain IRT44_10330 PF03949 Malic enzyme, NAD binding domain IRT44_10335 PF07729 FCD domain IRT44_10335 PF00392 Bacterial regulatory proteins, gntR family IRT44_10345 PF01039 Carboxyl transferase domain IRT44_10345 PF17848 Acetyl-coA carboxylase zinc finger domain IRT44_10350 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IRT44_10355 PF00365 Phosphofructokinase IRT44_10360 PF00391 PEP-utilising enzyme, mobile domain IRT44_10360 PF00224 Pyruvate kinase, barrel domain IRT44_10360 PF02887 Pyruvate kinase, alpha/beta domain IRT44_10365 PF02867 Ribonucleotide reductase, barrel domain IRT44_10365 PF17975 Ribonucleotide reductase alpha domain IRT44_10370 PF03061 Thioesterase superfamily IRT44_10375 PF04186 FxsA cytoplasmic membrane protein IRT44_10380 PF01594 AI-2E family transporter IRT44_10390 PF00180 Isocitrate/isopropylmalate dehydrogenase IRT44_10395 PF00056 lactate/malate dehydrogenase, NAD binding domain IRT44_10395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IRT44_10400 PF00072 Response regulator receiver domain IRT44_10400 PF00486 Transcriptional regulatory protein, C terminal IRT44_10405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_10405 PF00512 His Kinase A (phospho-acceptor) domain IRT44_10405 PF00989 PAS fold IRT44_10405 PF16736 Single Cache-like IRT44_10410 PF01895 PhoU domain IRT44_10420 PF04294 VanW like protein IRT44_10425 PF01047 MarR family IRT44_10435 PF13533 Biotin-lipoyl like IRT44_10440 PF07690 Major Facilitator Superfamily IRT44_10460 PF04748 Divergent polysaccharide deacetylase IRT44_10465 PF01367 5'-3' exonuclease, C-terminal SAM fold IRT44_10465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IRT44_10465 PF00476 DNA polymerase family A IRT44_10470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IRT44_10470 PF06827 Zinc finger found in FPG and IleRS IRT44_10470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IRT44_10475 PF01121 Dephospho-CoA kinase IRT44_10480 PF01551 Peptidase family M23 IRT44_10480 PF10145 Phage-related minor tail protein IRT44_10480 PF01464 Transglycosylase SLT domain IRT44_10485 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IRT44_10485 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IRT44_10495 PF11871 Domain of unknown function (DUF3391) IRT44_10495 PF01966 HD domain IRT44_10500 PF03477 ATP cone domain IRT44_10510 PF01695 IstB-like ATP binding protein IRT44_10510 PF07319 Primosomal protein DnaI N-terminus IRT44_10535 PF01695 IstB-like ATP binding protein IRT44_10540 PF00665 Integrase core domain IRT44_10540 PF02796 Helix-turn-helix domain of resolvase IRT44_10560 PF13538 UvrD-like helicase C-terminal domain IRT44_10570 PF00881 Nitroreductase family IRT44_10580 PF03702 Anhydro-N-acetylmuramic acid kinase IRT44_10585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_10590 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_10595 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_10595 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_10600 PF00144 Beta-lactamase IRT44_10605 PF00005 ABC transporter IRT44_10605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_10610 PF00005 ABC transporter IRT44_10610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_10625 PF02754 Cysteine-rich domain IRT44_10625 PF13183 4Fe-4S dicluster domain IRT44_10630 PF00375 Sodium:dicarboxylate symporter family IRT44_10645 PF09671 Spore coat protein (Spore_GerQ) IRT44_10650 PF07486 Cell Wall Hydrolase IRT44_10670 PF04055 Radical SAM superfamily IRT44_10680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IRT44_10680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_10680 PF02824 TGS domain IRT44_10680 PF03129 Anticodon binding domain IRT44_10685 PF06463 Molybdenum Cofactor Synthesis C IRT44_10685 PF04055 Radical SAM superfamily IRT44_10690 PF05198 Translation initiation factor IF-3, N-terminal domain IRT44_10690 PF00707 Translation initiation factor IF-3, C-terminal domain IRT44_10695 PF01632 Ribosomal protein L35 IRT44_10700 PF00453 Ribosomal protein L20 IRT44_10705 PF01507 Phosphoadenosine phosphosulfate reductase family IRT44_10710 PF01747 ATP-sulfurylase IRT44_10710 PF14306 PUA-like domain IRT44_10715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IRT44_10715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_10715 PF00205 Thiamine pyrophosphate enzyme, central domain IRT44_10720 PF10369 Small subunit of acetolactate synthase IRT44_10720 PF01842 ACT domain IRT44_10725 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IRT44_10725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IRT44_10730 PF08502 LeuA allosteric (dimerisation) domain IRT44_10730 PF00682 HMGL-like IRT44_10735 PF00180 Isocitrate/isopropylmalate dehydrogenase IRT44_10750 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_10750 PF05036 Sporulation related domain IRT44_10755 PF00994 Probable molybdopterin binding domain IRT44_10760 PF01938 TRAM domain IRT44_10760 PF00919 Uncharacterized protein family UPF0004 IRT44_10760 PF04055 Radical SAM superfamily IRT44_10765 PF09335 SNARE associated Golgi protein IRT44_10770 PF06961 Protein of unknown function (DUF1294) IRT44_10775 PF14098 Small, acid-soluble spore protein I IRT44_10780 PF02254 TrkA-N domain IRT44_10780 PF02080 TrkA-C domain IRT44_10785 PF00588 SpoU rRNA Methylase family IRT44_10785 PF08032 RNA 2'-O ribose methyltransferase substrate binding IRT44_10790 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IRT44_10790 PF01409 tRNA synthetases class II core domain (F) IRT44_10800 PF05164 Cell division protein ZapA IRT44_10805 PF02540 NAD synthase IRT44_10810 PF00731 AIR carboxylase IRT44_10820 PF01713 Smr domain IRT44_10820 PF00488 MutS domain V IRT44_10825 PF03994 Domain of Unknown Function (DUF350) IRT44_10835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_10835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_10835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_10840 PF03600 Citrate transporter IRT44_10845 PF00989 PAS fold IRT44_10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_10845 PF17203 Single cache domain 3 IRT44_10845 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_10850 PF00072 Response regulator receiver domain IRT44_10860 PF04951 D-aminopeptidase IRT44_10865 PF00534 Glycosyl transferases group 1 IRT44_10890 PF03023 Lipid II flippase MurJ IRT44_10900 PF14667 Polysaccharide biosynthesis C-terminal domain IRT44_10900 PF01943 Polysaccharide biosynthesis protein IRT44_10905 PF01209 ubiE/COQ5 methyltransferase family IRT44_10920 PF02803 Thiolase, C-terminal domain IRT44_10920 PF00108 Thiolase, N-terminal domain IRT44_10925 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_10930 PF13193 AMP-binding enzyme C-terminal domain IRT44_10930 PF00501 AMP-binding enzyme IRT44_10935 PF00440 Bacterial regulatory proteins, tetR family IRT44_10935 PF08359 YsiA-like protein, C-terminal region IRT44_10940 PF00378 Enoyl-CoA hydratase/isomerase IRT44_10945 PF01012 Electron transfer flavoprotein domain IRT44_10950 PF01012 Electron transfer flavoprotein domain IRT44_10950 PF00766 Electron transfer flavoprotein FAD-binding domain IRT44_10960 PF00085 Thioredoxin IRT44_10965 PF01541 GIY-YIG catalytic domain IRT44_10965 PF02151 UvrB/uvrC motif IRT44_10965 PF08459 UvrC Helix-hairpin-helix N-terminal IRT44_10970 PF01177 Asp/Glu/Hydantoin racemase IRT44_10975 PF00696 Amino acid kinase family IRT44_10975 PF13840 ACT domain IRT44_10985 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IRT44_10990 PF02910 Fumarate reductase flavoprotein C-term IRT44_10990 PF00890 FAD binding domain IRT44_10995 PF13085 2Fe-2S iron-sulfur cluster binding domain IRT44_10995 PF13183 4Fe-4S dicluster domain IRT44_11000 PF07690 Major Facilitator Superfamily IRT44_11005 PF01047 MarR family IRT44_11010 PF06280 Fn3-like domain IRT44_11010 PF00746 LPXTG cell wall anchor motif IRT44_11010 PF02225 PA domain IRT44_11010 PF00082 Subtilase family IRT44_11020 PF13690 Chemotaxis phosphatase CheX IRT44_11030 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_11030 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_11035 PF00196 Bacterial regulatory proteins, luxR family IRT44_11040 PF02954 Bacterial regulatory protein, Fis family IRT44_11040 PF00158 Sigma-54 interaction domain IRT44_11040 PF00989 PAS fold IRT44_11045 PF00202 Aminotransferase class-III IRT44_11050 PF00171 Aldehyde dehydrogenase family IRT44_11055 PF00324 Amino acid permease IRT44_11070 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_11075 PF08279 HTH domain IRT44_11075 PF05043 Mga helix-turn-helix domain IRT44_11075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IRT44_11075 PF00874 PRD domain IRT44_11080 PF01979 Amidohydrolase family IRT44_11110 PF03841 L-seryl-tRNA selenium transferase IRT44_11120 PF00381 PTS HPr component phosphorylation site IRT44_11125 PF01235 Sodium:alanine symporter family IRT44_11130 PF01012 Electron transfer flavoprotein domain IRT44_11135 PF01012 Electron transfer flavoprotein domain IRT44_11135 PF00766 Electron transfer flavoprotein FAD-binding domain IRT44_11170 PF00535 Glycosyl transferase family 2 IRT44_11180 PF07098 Protein of unknown function (DUF1360) IRT44_11185 PF00535 Glycosyl transferase family 2 IRT44_11195 PF00483 Nucleotidyl transferase IRT44_11195 PF01050 Mannose-6-phosphate isomerase IRT44_11200 PF01370 NAD dependent epimerase/dehydratase family IRT44_11210 PF00535 Glycosyl transferase family 2 IRT44_11225 PF00535 Glycosyl transferase family 2 IRT44_11245 PF00534 Glycosyl transferases group 1 IRT44_11245 PF13439 Glycosyltransferase Family 4 IRT44_11250 PF16363 GDP-mannose 4,6 dehydratase IRT44_11260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_11265 PF02954 Bacterial regulatory protein, Fis family IRT44_11265 PF00989 PAS fold IRT44_11265 PF00158 Sigma-54 interaction domain IRT44_11270 PF01546 Peptidase family M20/M25/M40 IRT44_11275 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_11280 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_11280 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_11285 PF00005 ABC transporter IRT44_11285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_11295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IRT44_11295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IRT44_11300 PF01177 Asp/Glu/Hydantoin racemase IRT44_11305 PF10646 Sporulation and spore germination IRT44_11315 PF01138 3' exoribonuclease family, domain 1 IRT44_11315 PF03725 3' exoribonuclease family, domain 2 IRT44_11325 PF12850 Calcineurin-like phosphoesterase superfamily domain IRT44_11330 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IRT44_11330 PF05698 Bacterial trigger factor protein (TF) C-terminus IRT44_11330 PF05697 Bacterial trigger factor protein (TF) IRT44_11335 PF00574 Clp protease IRT44_11340 PF06689 ClpX C4-type zinc finger IRT44_11340 PF07724 AAA domain (Cdc48 subfamily) IRT44_11340 PF10431 C-terminal, D2-small domain, of ClpB protein IRT44_11345 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_11345 PF05362 Lon protease (S16) C-terminal proteolytic domain IRT44_11350 PF02190 ATP-dependent protease La (LON) substrate-binding domain IRT44_11350 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_11350 PF05362 Lon protease (S16) C-terminal proteolytic domain IRT44_11355 PF01926 50S ribosome-binding GTPase IRT44_11360 PF07555 beta-N-acetylglucosaminidase IRT44_11360 PF00041 Fibronectin type III domain IRT44_11360 PF00754 F5/8 type C domain IRT44_11360 PF00963 Cohesin domain IRT44_11360 PF02838 Glycosyl hydrolase family 20, domain 2 IRT44_11370 PF02743 Cache domain IRT44_11370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_11370 PF00672 HAMP domain IRT44_11375 PF01488 Shikimate / quinate 5-dehydrogenase IRT44_11375 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IRT44_11375 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IRT44_11380 PF01578 Cytochrome C assembly protein IRT44_11385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IRT44_11385 PF03900 Porphobilinogen deaminase, C-terminal domain IRT44_11395 PF00490 Delta-aminolevulinic acid dehydratase IRT44_11400 PF00202 Aminotransferase class-III IRT44_11405 PF00665 Integrase core domain IRT44_11405 PF13276 HTH-like domain IRT44_11405 PF13333 Integrase core domain IRT44_11425 PF00561 alpha/beta hydrolase fold IRT44_11430 PF00149 Calcineurin-like phosphoesterase IRT44_11430 PF02872 5'-nucleotidase, C-terminal domain IRT44_11450 PF01208 Uroporphyrinogen decarboxylase (URO-D) IRT44_11455 PF00762 Ferrochelatase IRT44_11460 PF01593 Flavin containing amine oxidoreductase IRT44_11465 PF01476 LysM domain IRT44_11485 PF13426 PAS domain IRT44_11485 PF07228 Stage II sporulation protein E (SpoIIE) IRT44_11500 PF00133 tRNA synthetases class I (I, L, M and V) IRT44_11500 PF08264 Anticodon-binding domain of tRNA IRT44_11500 PF10458 Valyl tRNA synthetase tRNA binding arm IRT44_11505 PF08245 Mur ligase middle domain IRT44_11505 PF02875 Mur ligase family, glutamate ligase domain IRT44_11510 PF01225 Mur ligase family, catalytic domain IRT44_11510 PF02875 Mur ligase family, glutamate ligase domain IRT44_11510 PF08245 Mur ligase middle domain IRT44_11515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IRT44_11515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IRT44_11520 PF00999 Sodium/hydrogen exchanger family IRT44_11525 PF02080 TrkA-C domain IRT44_11550 PF02545 Maf-like protein IRT44_11555 PF04002 RadC-like JAB domain IRT44_11565 PF04085 rod shape-determining protein MreC IRT44_11570 PF04093 rod shape-determining protein MreD IRT44_11575 PF03717 Penicillin-binding Protein dimerisation domain IRT44_11575 PF00905 Penicillin binding protein transpeptidase domain IRT44_11580 PF03775 Septum formation inhibitor MinC, C-terminal domain IRT44_11585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IRT44_11590 PF01098 Cell cycle protein IRT44_11595 PF00313 'Cold-shock' DNA-binding domain IRT44_11605 PF02163 Peptidase family M50 IRT44_11610 PF10150 Ribonuclease E/G family IRT44_11610 PF00575 S1 RNA binding domain IRT44_11615 PF00829 Ribosomal prokaryotic L21 protein IRT44_11620 PF04327 Cysteine protease Prp IRT44_11625 PF01016 Ribosomal L27 protein IRT44_11635 PF09269 Domain of unknown function (DUF1967) IRT44_11635 PF01018 GTP1/OBG IRT44_11635 PF01926 50S ribosome-binding GTPase IRT44_11655 PF03447 Homoserine dehydrogenase, NAD binding domain IRT44_11655 PF00742 Homoserine dehydrogenase IRT44_11655 PF01842 ACT domain IRT44_11660 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_11665 PF08544 GHMP kinases C terminal IRT44_11665 PF00288 GHMP kinases N terminal domain IRT44_11670 PF00800 Prephenate dehydratase IRT44_11670 PF01842 ACT domain IRT44_11675 PF01476 LysM domain IRT44_11685 PF00149 Calcineurin-like phosphoesterase IRT44_11685 PF02872 5'-nucleotidase, C-terminal domain IRT44_11705 PF02075 Crossover junction endodeoxyribonuclease RuvC IRT44_11710 PF07499 RuvA, C-terminal domain IRT44_11710 PF01330 RuvA N terminal domain IRT44_11715 PF17864 RuvB AAA lid domain IRT44_11715 PF05491 RuvB C-terminal winged helix domain IRT44_11715 PF05496 Holliday junction DNA helicase RuvB P-loop domain IRT44_11720 PF11146 Protein of unknown function (DUF2905) IRT44_11730 PF08486 Stage II sporulation protein IRT44_11735 PF02547 Queuosine biosynthesis protein IRT44_11740 PF01702 Queuine tRNA-ribosyltransferase IRT44_11745 PF02699 Preprotein translocase subunit IRT44_11755 PF01544 CorA-like Mg2+ transporter protein IRT44_11760 PF04239 Protein of unknown function (DUF421) IRT44_11765 PF01943 Polysaccharide biosynthesis protein IRT44_11765 PF14667 Polysaccharide biosynthesis C-terminal domain IRT44_11775 PF07549 SecD/SecF GG Motif IRT44_11775 PF02355 Protein export membrane protein IRT44_11780 PF07549 SecD/SecF GG Motif IRT44_11780 PF02355 Protein export membrane protein IRT44_11785 PF01545 Cation efflux family IRT44_11785 PF16916 Dimerisation domain of Zinc Transporter IRT44_11790 PF10141 Single-strand DNA-specific exonuclease, C terminal domain IRT44_11790 PF17768 RecJ OB domain IRT44_11790 PF02272 DHHA1 domain IRT44_11790 PF01368 DHH family IRT44_11795 PF00156 Phosphoribosyl transferase domain IRT44_11800 PF13291 ACT domain IRT44_11800 PF04607 Region found in RelA / SpoT proteins IRT44_11800 PF02824 TGS domain IRT44_11805 PF02580 D-Tyr-tRNA(Tyr) deacylase IRT44_11815 PF12697 Alpha/beta hydrolase family IRT44_11820 PF00440 Bacterial regulatory proteins, tetR family IRT44_11820 PF08361 MAATS-type transcriptional repressor, C-terminal region IRT44_11825 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_11825 PF08239 Bacterial SH3 domain IRT44_11835 PF04055 Radical SAM superfamily IRT44_11840 PF13393 Histidyl-tRNA synthetase IRT44_11840 PF03129 Anticodon binding domain IRT44_11845 PF00152 tRNA synthetases class II (D, K and N) IRT44_11845 PF02938 GAD domain IRT44_11845 PF01336 OB-fold nucleic acid binding domain IRT44_11855 PF00899 ThiF family IRT44_11865 PF08220 DeoR-like helix-turn-helix domain IRT44_11865 PF00455 DeoR C terminal sensor domain IRT44_11870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IRT44_11870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_11875 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_11875 PF12002 MgsA AAA+ ATPase C terminal IRT44_11875 PF16193 AAA C-terminal domain IRT44_11885 PF02082 Transcriptional regulator IRT44_11890 PF00266 Aminotransferase class-V IRT44_11915 PF03741 Integral membrane protein TerC family IRT44_11920 PF01594 AI-2E family transporter IRT44_11925 PF02272 DHHA1 domain IRT44_11925 PF01411 tRNA synthetases class II (A) IRT44_11925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IRT44_11930 PF06135 IreB regulatory phosphoprotein IRT44_11935 PF03652 Holliday junction resolvase IRT44_11940 PF06949 Protein of unknown function (DUF1292) IRT44_11945 PF02618 YceG-like family IRT44_11950 PF01596 O-methyltransferase IRT44_11955 PF00485 Phosphoribulokinase / Uridine kinase family IRT44_11960 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_11965 PF03717 Penicillin-binding Protein dimerisation domain IRT44_11965 PF00905 Penicillin binding protein transpeptidase domain IRT44_11975 PF00072 Response regulator receiver domain IRT44_11980 PF00455 DeoR C terminal sensor domain IRT44_11980 PF08220 DeoR-like helix-turn-helix domain IRT44_11985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IRT44_11985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IRT44_11990 PF00294 pfkB family carbohydrate kinase IRT44_11995 PF00005 ABC transporter IRT44_12000 PF02653 Branched-chain amino acid transport system / permease component IRT44_12005 PF02653 Branched-chain amino acid transport system / permease component IRT44_12025 PF13276 HTH-like domain IRT44_12025 PF00665 Integrase core domain IRT44_12025 PF13333 Integrase core domain IRT44_12035 PF04542 Sigma-70 region 2 IRT44_12035 PF04545 Sigma-70, region 4 IRT44_12040 PF01614 Bacterial transcriptional regulator IRT44_12040 PF09339 IclR helix-turn-helix domain IRT44_12045 PF13408 Recombinase zinc beta ribbon domain IRT44_12045 PF00239 Resolvase, N terminal domain IRT44_12045 PF07508 Recombinase IRT44_12050 PF04542 Sigma-70 region 2 IRT44_12050 PF04545 Sigma-70, region 4 IRT44_12055 PF13408 Recombinase zinc beta ribbon domain IRT44_12055 PF00239 Resolvase, N terminal domain IRT44_12055 PF07508 Recombinase IRT44_12065 PF00005 ABC transporter IRT44_12075 PF00005 ABC transporter IRT44_12080 PF00392 Bacterial regulatory proteins, gntR family IRT44_12100 PF03641 Possible lysine decarboxylase IRT44_12115 PF01272 Transcription elongation factor, GreA/GreB, C-term IRT44_12115 PF03449 Transcription elongation factor, N-terminal IRT44_12125 PF00085 Thioredoxin IRT44_12130 PF02600 Disulfide bond formation protein DsbB IRT44_12135 PF00149 Calcineurin-like phosphoesterase IRT44_12140 PF02146 Sir2 family IRT44_12165 PF00005 ABC transporter IRT44_12165 PF16326 ABC transporter C-terminal domain IRT44_12165 PF12848 ABC transporter IRT44_12170 PF01063 Amino-transferase class IV IRT44_12175 PF03576 Peptidase family S58 IRT44_12185 PF13769 Virulence factor IRT44_12185 PF08712 Scaffold protein Nfu/NifU N terminal IRT44_12190 PF01593 Flavin containing amine oxidoreductase IRT44_12200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_12205 PF07722 Peptidase C26 IRT44_12210 PF11798 IMS family HHH motif IRT44_12210 PF11799 impB/mucB/samB family C-terminal domain IRT44_12210 PF00817 impB/mucB/samB family IRT44_12220 PF01926 50S ribosome-binding GTPase IRT44_12225 PF01488 Shikimate / quinate 5-dehydrogenase IRT44_12225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IRT44_12225 PF08501 Shikimate dehydrogenase substrate binding domain IRT44_12230 PF01985 CRS1 / YhbY (CRM) domain IRT44_12235 PF01467 Cytidylyltransferase-like IRT44_12240 PF01966 HD domain IRT44_12250 PF13649 Methyltransferase domain IRT44_12255 PF00133 tRNA synthetases class I (I, L, M and V) IRT44_12255 PF09334 tRNA synthetases class I (M) IRT44_12255 PF13603 Leucyl-tRNA synthetase, Domain 2 IRT44_12255 PF08264 Anticodon-binding domain of tRNA IRT44_12260 PF03807 NADP oxidoreductase coenzyme F420-dependent IRT44_12260 PF14748 Pyrroline-5-carboxylate reductase dimerisation IRT44_12265 PF10531 SLBB domain IRT44_12270 PF13537 Glutamine amidotransferase domain IRT44_12270 PF00733 Asparagine synthase IRT44_12275 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IRT44_12280 PF03772 Competence protein IRT44_12280 PF13567 Domain of unknown function (DUF4131) IRT44_12280 PF00753 Metallo-beta-lactamase superfamily IRT44_12285 PF08281 Sigma-70, region 4 IRT44_12285 PF04542 Sigma-70 region 2 IRT44_12300 PF01649 Ribosomal protein S20 IRT44_12305 PF03418 Germination protease IRT44_12310 PF07454 Stage II sporulation protein P (SpoIIP) IRT44_12325 PF00005 ABC transporter IRT44_12325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_12330 PF00005 ABC transporter IRT44_12330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_12335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_12340 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_12345 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_12345 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_12350 PF01321 Creatinase/Prolidase N-terminal domain IRT44_12350 PF00557 Metallopeptidase family M24 IRT44_12360 PF08281 Sigma-70, region 4 IRT44_12360 PF04542 Sigma-70 region 2 IRT44_12370 PF06421 GTP-binding protein LepA C-terminus IRT44_12370 PF03144 Elongation factor Tu domain 2 IRT44_12370 PF00679 Elongation factor G C-terminus IRT44_12370 PF00009 Elongation factor Tu GTP binding domain IRT44_12375 PF04055 Radical SAM superfamily IRT44_12375 PF06969 HemN C-terminal domain IRT44_12380 PF01628 HrcA protein C terminal domain IRT44_12380 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding IRT44_12385 PF01025 GrpE IRT44_12390 PF00012 Hsp70 protein IRT44_12395 PF00684 DnaJ central domain IRT44_12395 PF00226 DnaJ domain IRT44_12395 PF01556 DnaJ C terminal domain IRT44_12405 PF04452 RNA methyltransferase IRT44_12410 PF01938 TRAM domain IRT44_12410 PF04055 Radical SAM superfamily IRT44_12410 PF00919 Uncharacterized protein family UPF0004 IRT44_12420 PF01791 DeoC/LacD family aldolase IRT44_12425 PF03788 LrgA family IRT44_12430 PF04172 LrgB-like family IRT44_12435 PF02690 Na+/Pi-cotransporter IRT44_12440 PF17785 PUA-like domain IRT44_12440 PF10672 S-adenosylmethionine-dependent methyltransferase IRT44_12455 PF01820 D-ala D-ala ligase N-terminus IRT44_12455 PF07478 D-ala D-ala ligase C-terminus IRT44_12460 PF01225 Mur ligase family, catalytic domain IRT44_12460 PF08245 Mur ligase middle domain IRT44_12460 PF02875 Mur ligase family, glutamate ligase domain IRT44_12465 PF01165 Ribosomal protein S21 IRT44_12470 PF09424 Yqey-like protein IRT44_12475 PF01957 NfeD-like C-terminal, partner-binding IRT44_12475 PF01972 Serine dehydrogenase proteinase IRT44_12480 PF12127 SigmaW regulon antibacterial IRT44_12495 PF07873 YabP family IRT44_12500 PF06898 Putative stage IV sporulation protein YqfD IRT44_12505 PF02562 PhoH-like protein IRT44_12510 PF02130 Uncharacterized protein family UPF0054 IRT44_12520 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IRT44_12525 PF01926 50S ribosome-binding GTPase IRT44_12525 PF07650 KH domain IRT44_12535 PF11967 Recombination protein O N terminal IRT44_12535 PF02565 Recombination protein O C terminal IRT44_12545 PF05746 DALR anticodon binding domain IRT44_12545 PF02092 Glycyl-tRNA synthetase beta subunit IRT44_12550 PF00571 CBS domain IRT44_12550 PF08279 HTH domain IRT44_12555 PF03618 Kinase/pyrophosphorylase IRT44_12560 PF10410 DnaB-helicase binding domain of primase IRT44_12560 PF08275 DNA primase catalytic core, N-terminal domain IRT44_12560 PF01807 CHC2 zinc finger IRT44_12565 PF03979 Sigma-70 factor, region 1.1 IRT44_12565 PF00140 Sigma-70 factor, region 1.2 IRT44_12565 PF04542 Sigma-70 region 2 IRT44_12565 PF04539 Sigma-70 region 3 IRT44_12565 PF04545 Sigma-70, region 4 IRT44_12580 PF02770 Acyl-CoA dehydrogenase, middle domain IRT44_12580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IRT44_12580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IRT44_12585 PF04816 tRNA (adenine(22)-N(1))-methyltransferase IRT44_12590 PF01784 NIF3 (NGG1p interacting factor 3) IRT44_12600 PF01471 Putative peptidoglycan binding domain IRT44_12600 PF03572 Peptidase family S41 IRT44_12600 PF17820 PDZ domain IRT44_12610 PF13276 HTH-like domain IRT44_12610 PF00665 Integrase core domain IRT44_12610 PF13333 Integrase core domain IRT44_12620 PF03372 Endonuclease/Exonuclease/phosphatase family IRT44_12685 PF04055 Radical SAM superfamily IRT44_12685 PF16199 Radical_SAM C-terminal domain IRT44_12700 PF00583 Acetyltransferase (GNAT) family IRT44_12710 PF00202 Aminotransferase class-III IRT44_12715 PF01144 Coenzyme A transferase IRT44_12720 PF01144 Coenzyme A transferase IRT44_12725 PF07687 Peptidase dimerisation domain IRT44_12725 PF01546 Peptidase family M20/M25/M40 IRT44_12730 PF00171 Aldehyde dehydrogenase family IRT44_12750 PF01695 IstB-like ATP binding protein IRT44_12755 PF02796 Helix-turn-helix domain of resolvase IRT44_12755 PF00665 Integrase core domain IRT44_12775 PF13193 AMP-binding enzyme C-terminal domain IRT44_12775 PF00501 AMP-binding enzyme IRT44_12785 PF07075 Protein of unknown function (DUF1343) IRT44_12795 PF17932 Tetracyclin repressor-like, C-terminal domain IRT44_12795 PF00440 Bacterial regulatory proteins, tetR family IRT44_12800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_12815 PF02525 Flavodoxin-like fold IRT44_12820 PF00082 Subtilase family IRT44_12830 PF00005 ABC transporter IRT44_12830 PF17912 MalK OB fold domain IRT44_12830 PF03459 TOBE domain IRT44_12835 PF13556 PucR C-terminal helix-turn-helix domain IRT44_12840 PF00149 Calcineurin-like phosphoesterase IRT44_12845 PF13193 AMP-binding enzyme C-terminal domain IRT44_12845 PF00501 AMP-binding enzyme IRT44_12850 PF01545 Cation efflux family IRT44_12850 PF16916 Dimerisation domain of Zinc Transporter IRT44_12865 PF00196 Bacterial regulatory proteins, luxR family IRT44_12865 PF00072 Response regulator receiver domain IRT44_12870 PF00672 HAMP domain IRT44_12870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_12870 PF07730 Histidine kinase IRT44_12870 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IRT44_12875 PF08543 Phosphomethylpyrimidine kinase IRT44_12885 PF04542 Sigma-70 region 2 IRT44_12885 PF08281 Sigma-70, region 4 IRT44_12895 PF01712 Deoxynucleoside kinase IRT44_12900 PF01712 Deoxynucleoside kinase IRT44_12905 PF13649 Methyltransferase domain IRT44_12910 PF01329 Pterin 4 alpha carbinolamine dehydratase IRT44_12920 PF03061 Thioesterase superfamily IRT44_12925 PF04134 Protein of unknown function, DUF393 IRT44_12945 PF00171 Aldehyde dehydrogenase family IRT44_12950 PF00120 Glutamine synthetase, catalytic domain IRT44_12995 PF00005 ABC transporter IRT44_13015 PF00884 Sulfatase IRT44_13020 PF05683 Fumarase C-terminus IRT44_13020 PF05681 Fumarate hydratase (Fumerase) IRT44_13025 PF01476 LysM domain IRT44_13025 PF01551 Peptidase family M23 IRT44_13030 PF00795 Carbon-nitrogen hydrolase IRT44_13050 PF04055 Radical SAM superfamily IRT44_13050 PF08756 YfkB-like domain IRT44_13060 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_13065 PF01521 Iron-sulphur cluster biosynthesis IRT44_13080 PF00733 Asparagine synthase IRT44_13080 PF13537 Glutamine amidotransferase domain IRT44_13085 PF07694 5TMR of 5TMR-LYT IRT44_13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_13085 PF06580 Histidine kinase IRT44_13090 PF04397 LytTr DNA-binding domain IRT44_13090 PF00072 Response regulator receiver domain IRT44_13095 PF04341 Protein of unknown function, DUF485 IRT44_13100 PF00474 Sodium:solute symporter family IRT44_13105 PF00474 Sodium:solute symporter family IRT44_13110 PF01261 Xylose isomerase-like TIM barrel IRT44_13120 PF03485 Arginyl tRNA synthetase N terminal domain IRT44_13120 PF05746 DALR anticodon binding domain IRT44_13120 PF00750 tRNA synthetases class I (R) IRT44_13135 PF02310 B12 binding domain IRT44_13135 PF02965 Vitamin B12 dependent methionine synthase, activation domain IRT44_13135 PF00809 Pterin binding enzyme IRT44_13135 PF02607 B12 binding domain IRT44_13135 PF02574 Homocysteine S-methyltransferase IRT44_13140 PF02574 Homocysteine S-methyltransferase IRT44_13140 PF02219 Methylenetetrahydrofolate reductase IRT44_13145 PF03167 Uracil DNA glycosylase superfamily IRT44_13150 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IRT44_13155 PF00009 Elongation factor Tu GTP binding domain IRT44_13155 PF03144 Elongation factor Tu domain 2 IRT44_13155 PF16658 Class II release factor RF3, C-terminal domain IRT44_13170 PF00581 Rhodanese-like domain IRT44_13200 PF05193 Peptidase M16 inactive domain IRT44_13200 PF00675 Insulinase (Peptidase family M16) IRT44_13205 PF00005 ABC transporter IRT44_13225 PF00072 Response regulator receiver domain IRT44_13225 PF04397 LytTr DNA-binding domain IRT44_13235 PF11084 Protein of unknown function (DUF2621) IRT44_13255 PF02796 Helix-turn-helix domain of resolvase IRT44_13255 PF00239 Resolvase, N terminal domain IRT44_13265 PF05675 Protein of unknown function (DUF817) IRT44_13270 PF13443 Cro/C1-type HTH DNA-binding domain IRT44_13275 PF11188 Protein of unknown function (DUF2975) IRT44_13290 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_13295 PF00005 ABC transporter IRT44_13305 PF12706 Beta-lactamase superfamily domain IRT44_13325 PF00082 Subtilase family IRT44_13335 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IRT44_13340 PF03466 LysR substrate binding domain IRT44_13340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_13345 PF07690 Major Facilitator Superfamily IRT44_13350 PF00324 Amino acid permease IRT44_13355 PF02954 Bacterial regulatory protein, Fis family IRT44_13355 PF00158 Sigma-54 interaction domain IRT44_13355 PF13426 PAS domain IRT44_13360 PF00202 Aminotransferase class-III IRT44_13365 PF08970 Sporulation inhibitor A IRT44_13375 PF07687 Peptidase dimerisation domain IRT44_13375 PF01546 Peptidase family M20/M25/M40 IRT44_13380 PF03806 AbgT putative transporter family IRT44_13385 PF00155 Aminotransferase class I and II IRT44_13390 PF07408 Protein of unknown function (DUF1507) IRT44_13395 PF00209 Sodium:neurotransmitter symporter family IRT44_13405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_13410 PF01699 Sodium/calcium exchanger protein IRT44_13420 PF07486 Cell Wall Hydrolase IRT44_13420 PF01471 Putative peptidoglycan binding domain IRT44_13425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_13425 PF00205 Thiamine pyrophosphate enzyme, central domain IRT44_13425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IRT44_13435 PF01098 Cell cycle protein IRT44_13440 PF08868 YugN-like family IRT44_13450 PF00571 CBS domain IRT44_13455 PF13649 Methyltransferase domain IRT44_13460 PF00565 Staphylococcal nuclease homologue IRT44_13480 PF06133 Control of competence regulator ComK, YlbF/YmcA IRT44_13490 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) IRT44_13495 PF03746 LamB/YcsF family IRT44_13500 PF03459 TOBE domain IRT44_13500 PF00005 ABC transporter IRT44_13505 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_13515 PF12727 PBP superfamily domain IRT44_13515 PF12728 Helix-turn-helix domain IRT44_13525 PF01202 Shikimate kinase IRT44_13530 PF14038 YqzE-like protein IRT44_13535 PF03698 Uncharacterised protein family (UPF0180) IRT44_13550 PF00271 Helicase conserved C-terminal domain IRT44_13550 PF00176 SNF2 family N-terminal domain IRT44_13555 PF01571 Aminomethyltransferase folate-binding domain IRT44_13555 PF08669 Glycine cleavage T-protein C-terminal barrel domain IRT44_13560 PF02347 Glycine cleavage system P-protein IRT44_13565 PF02347 Glycine cleavage system P-protein IRT44_13570 PF04072 Leucine carboxyl methyltransferase IRT44_13575 PF03099 Biotin/lipoate A/B protein ligase family IRT44_13580 PF01047 MarR family IRT44_13585 PF07690 Major Facilitator Superfamily IRT44_13590 PF01063 Amino-transferase class IV IRT44_13600 PF00512 His Kinase A (phospho-acceptor) domain IRT44_13600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_13600 PF13188 PAS domain IRT44_13600 PF13426 PAS domain IRT44_13600 PF00989 PAS fold IRT44_13610 PF03358 NADPH-dependent FMN reductase IRT44_13615 PF02742 Iron dependent repressor, metal binding and dimerisation domain IRT44_13615 PF01325 Iron dependent repressor, N-terminal DNA binding domain IRT44_13620 PF01734 Patatin-like phospholipase IRT44_13630 PF07136 Protein of unknown function (DUF1385) IRT44_13640 PF01220 Dehydroquinase class II IRT44_13645 PF01321 Creatinase/Prolidase N-terminal domain IRT44_13645 PF00557 Metallopeptidase family M24 IRT44_13650 PF01132 Elongation factor P (EF-P) OB domain IRT44_13650 PF09285 Elongation factor P, C-terminal IRT44_13650 PF08207 Elongation factor P (EF-P) KOW-like domain IRT44_13655 PF04284 Protein of unknown function (DUF441) IRT44_13660 PF04029 2-phosphosulpholactate phosphatase IRT44_13665 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) IRT44_13670 PF10942 Protein of unknown function (DUF2619) IRT44_13685 PF09548 Stage III sporulation protein AB (spore_III_AB) IRT44_13695 PF06686 Stage III sporulation protein AC/AD protein family IRT44_13700 PF09546 Stage III sporulation protein AE (spore_III_AE) IRT44_13705 PF09581 Stage III sporulation protein AF (Spore_III_AF) IRT44_13715 PF12685 SpoIIIAH-like protein IRT44_13720 PF00364 Biotin-requiring enzyme IRT44_13725 PF02785 Biotin carboxylase C-terminal domain IRT44_13725 PF00289 Biotin carboxylase, N-terminal domain IRT44_13725 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_13730 PF03780 Asp23 family, cell envelope-related function IRT44_13745 PF01029 NusB family IRT44_13750 PF00814 Glycoprotease family IRT44_13755 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IRT44_13755 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IRT44_13760 PF02601 Exonuclease VII, large subunit IRT44_13760 PF13742 OB-fold nucleic acid binding domain IRT44_13770 PF00348 Polyprenyl synthetase IRT44_13775 PF02780 Transketolase, C-terminal domain IRT44_13775 PF02779 Transketolase, pyrimidine binding domain IRT44_13775 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IRT44_13780 PF01728 FtsJ-like methyltransferase IRT44_13780 PF01479 S4 domain IRT44_13785 PF01513 ATP-NAD kinase IRT44_13790 PF01316 Arginine repressor, DNA binding domain IRT44_13790 PF02863 Arginine repressor, C-terminal domain IRT44_13795 PF13476 AAA domain IRT44_13800 PF17820 PDZ domain IRT44_13800 PF05580 SpoIVB peptidase S55 IRT44_13805 PF08769 Sporulation initiation factor Spo0A C terminal IRT44_13805 PF00072 Response regulator receiver domain IRT44_13810 PF13581 Histidine kinase-like ATPase domain IRT44_13815 PF00512 His Kinase A (phospho-acceptor) domain IRT44_13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_13820 PF00484 Carbonic anhydrase IRT44_13825 PF00149 Calcineurin-like phosphoesterase IRT44_13825 PF10518 TAT (twin-arginine translocation) pathway signal sequence IRT44_13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_13830 PF03466 LysR substrate binding domain IRT44_13860 PF00535 Glycosyl transferase family 2 IRT44_13875 PF02954 Bacterial regulatory protein, Fis family IRT44_13875 PF00989 PAS fold IRT44_13875 PF00158 Sigma-54 interaction domain IRT44_13880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IRT44_13880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IRT44_13885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_13890 PF00676 Dehydrogenase E1 component IRT44_13895 PF02779 Transketolase, pyrimidine binding domain IRT44_13895 PF02780 Transketolase, C-terminal domain IRT44_13900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IRT44_13900 PF00364 Biotin-requiring enzyme IRT44_13900 PF02817 e3 binding domain IRT44_13910 PF02310 B12 binding domain IRT44_13910 PF01642 Methylmalonyl-CoA mutase IRT44_13920 PF01039 Carboxyl transferase domain IRT44_13925 PF01546 Peptidase family M20/M25/M40 IRT44_13925 PF07687 Peptidase dimerisation domain IRT44_13935 PF00293 NUDIX domain IRT44_13945 PF01944 Stage II sporulation protein M IRT44_13950 PF01475 Ferric uptake regulator family IRT44_13955 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IRT44_13955 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IRT44_13965 PF00589 Phage integrase family IRT44_13965 PF02899 Phage integrase, N-terminal SAM-like domain IRT44_13970 PF01676 Metalloenzyme superfamily IRT44_13975 PF01048 Phosphorylase superfamily IRT44_13980 PF02885 Glycosyl transferase family, helical bundle domain IRT44_13980 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IRT44_13980 PF00591 Glycosyl transferase family, a/b domain IRT44_13990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IRT44_13995 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_14000 PF12911 N-terminal TM domain of oligopeptide transport permease C IRT44_14000 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_14005 PF00005 ABC transporter IRT44_14005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_14010 PF00005 ABC transporter IRT44_14010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IRT44_14015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_14015 PF00672 HAMP domain IRT44_14015 PF02743 Cache domain IRT44_14020 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_14020 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_14025 PF01740 STAS domain IRT44_14030 PF13581 Histidine kinase-like ATPase domain IRT44_14035 PF04542 Sigma-70 region 2 IRT44_14035 PF04539 Sigma-70 region 3 IRT44_14035 PF04545 Sigma-70, region 4 IRT44_14040 PF12164 Stage V sporulation protein AA IRT44_14045 PF13782 Stage V sporulation protein AB IRT44_14050 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_14055 PF07451 Stage V sporulation protein AD (SpoVAD) IRT44_14060 PF03862 SpoVAC/SpoVAEB sporulation membrane protein IRT44_14065 PF14097 Stage V sporulation protein AE1 IRT44_14070 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_14075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IRT44_14075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IRT44_14080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IRT44_14085 PF02163 Peptidase family M50 IRT44_14090 PF02616 Segregation and condensation protein ScpA IRT44_14095 PF04079 Segregation and condensation complex subunit ScpB IRT44_14100 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_14100 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_14105 PF07670 Nucleoside recognition IRT44_14110 PF07670 Nucleoside recognition IRT44_14115 PF00849 RNA pseudouridylate synthase IRT44_14115 PF01479 S4 domain IRT44_14120 PF00578 AhpC/TSA family IRT44_14125 PF05140 ResB-like family IRT44_14130 PF01578 Cytochrome C assembly protein IRT44_14135 PF00072 Response regulator receiver domain IRT44_14135 PF00486 Transcriptional regulatory protein, C terminal IRT44_14140 PF18698 Histidine kinase sensor domain IRT44_14140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_14140 PF00672 HAMP domain IRT44_14140 PF00989 PAS fold IRT44_14140 PF00512 His Kinase A (phospho-acceptor) domain IRT44_14145 PF13419 Haloacid dehalogenase-like hydrolase IRT44_14150 PF03600 Citrate transporter IRT44_14155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_14155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_14155 PF01842 ACT domain IRT44_14160 PF00266 Aminotransferase class-V IRT44_14165 PF00719 Inorganic pyrophosphatase IRT44_14180 PF14493 Helix-turn-helix domain IRT44_14185 PF00271 Helicase conserved C-terminal domain IRT44_14185 PF00270 DEAD/DEAH box helicase IRT44_14210 PF05389 Negative regulator of genetic competence (MecA) IRT44_14215 PF02585 GlcNAc-PI de-N-acetylase IRT44_14220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IRT44_14220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IRT44_14225 PF00710 Asparaginase, N-terminal IRT44_14225 PF17763 Glutaminase/Asparaginase C-terminal domain IRT44_14230 PF13367 PrsW family intramembrane metalloprotease IRT44_14250 PF02224 Cytidylate kinase IRT44_14255 PF01553 Acyltransferase IRT44_14260 PF00575 S1 RNA binding domain IRT44_14265 PF01070 FMN-dependent dehydrogenase IRT44_14275 PF14045 YIEGIA protein IRT44_14285 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IRT44_14285 PF01926 50S ribosome-binding GTPase IRT44_14290 PF02660 Glycerol-3-phosphate acyltransferase IRT44_14295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IRT44_14295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IRT44_14330 PF09547 Stage IV sporulation protein A (spore_IV_A) IRT44_14335 PF00216 Bacterial DNA-binding protein IRT44_14340 PF01227 GTP cyclohydrolase I IRT44_14355 PF01464 Transglycosylase SLT domain IRT44_14360 PF02081 Tryptophan RNA-binding attenuator protein IRT44_14370 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 IRT44_14375 PF01209 ubiE/COQ5 methyltransferase family IRT44_14380 PF01040 UbiA prenyltransferase family IRT44_14385 PF02441 Flavoprotein IRT44_14395 PF00348 Polyprenyl synthetase IRT44_14400 PF00334 Nucleoside diphosphate kinase IRT44_14405 PF01739 CheR methyltransferase, SAM binding domain IRT44_14405 PF03705 CheR methyltransferase, all-alpha domain IRT44_14415 PF01264 Chorismate synthase IRT44_14420 PF01761 3-dehydroquinate synthase IRT44_14425 PF07736 Chorismate mutase type I IRT44_14430 PF04715 Anthranilate synthase component I, N terminal region IRT44_14430 PF00425 chorismate binding enzyme IRT44_14435 PF02885 Glycosyl transferase family, helical bundle domain IRT44_14435 PF00591 Glycosyl transferase family, a/b domain IRT44_14440 PF00218 Indole-3-glycerol phosphate synthase IRT44_14445 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IRT44_14450 PF00291 Pyridoxal-phosphate dependent enzyme IRT44_14455 PF00290 Tryptophan synthase alpha chain IRT44_14460 PF00155 Aminotransferase class I and II IRT44_14470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_14475 PF01979 Amidohydrolase family IRT44_14480 PF04542 Sigma-70 region 2 IRT44_14480 PF08281 Sigma-70, region 4 IRT44_14510 PF00355 Rieske [2Fe-2S] domain IRT44_14515 PF00033 Cytochrome b/b6/petB IRT44_14520 PF00032 Cytochrome b(C-terminal)/b6/petD IRT44_14520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IRT44_14535 PF01645 Conserved region in glutamate synthase IRT44_14540 PF09844 Uncharacterized conserved protein (COG2071) IRT44_14545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_14545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_14550 PF03819 MazG nucleotide pyrophosphohydrolase domain IRT44_14555 PF01113 Dihydrodipicolinate reductase, N-terminus IRT44_14555 PF05173 Dihydrodipicolinate reductase, C-terminus IRT44_14560 PF02142 MGS-like domain IRT44_14565 PF02585 GlcNAc-PI de-N-acetylase IRT44_14570 PF13439 Glycosyltransferase Family 4 IRT44_14570 PF00534 Glycosyl transferases group 1 IRT44_14580 PF02237 Biotin protein ligase C terminal domain IRT44_14580 PF03099 Biotin/lipoate A/B protein ligase family IRT44_14580 PF08279 HTH domain IRT44_14585 PF02548 Ketopantoate hydroxymethyltransferase IRT44_14590 PF02569 Pantoate-beta-alanine ligase IRT44_14595 PF02261 Aspartate decarboxylase IRT44_14605 PF00929 Exonuclease IRT44_14605 PF13307 Helicase C-terminal domain IRT44_14605 PF04851 Type III restriction enzyme, res subunit IRT44_14615 PF02629 CoA binding domain IRT44_14615 PF06971 Putative DNA-binding protein N-terminus IRT44_14620 PF01979 Amidohydrolase family IRT44_14645 PF01434 Peptidase family M41 IRT44_14645 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_14645 PF17862 AAA+ lid domain IRT44_14645 PF06480 FtsH Extracellular IRT44_14655 PF01336 OB-fold nucleic acid binding domain IRT44_14655 PF00152 tRNA synthetases class II (D, K and N) IRT44_14660 PF07261 Replication initiation and membrane attachment IRT44_14670 PF00534 Glycosyl transferases group 1 IRT44_14675 PF00483 Nucleotidyl transferase IRT44_14685 PF00534 Glycosyl transferases group 1 IRT44_14685 PF13439 Glycosyltransferase Family 4 IRT44_14690 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_14690 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_14690 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_14695 PF01432 Peptidase family M3 IRT44_14695 PF08439 Oligopeptidase F IRT44_14700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IRT44_14705 PF00873 AcrB/AcrD/AcrF family IRT44_14715 PF04461 Protein of unknown function (DUF520) IRT44_14725 PF00501 AMP-binding enzyme IRT44_14725 PF13193 AMP-binding enzyme C-terminal domain IRT44_14730 PF00694 Aconitase C-terminal domain IRT44_14735 PF00330 Aconitase family (aconitate hydratase) IRT44_14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_14740 PF03466 LysR substrate binding domain IRT44_14745 PF00085 Thioredoxin IRT44_14750 PF00849 RNA pseudouridylate synthase IRT44_14750 PF01479 S4 domain IRT44_14755 PF14398 YheC/D like ATP-grasp IRT44_14775 PF00486 Transcriptional regulatory protein, C terminal IRT44_14775 PF00072 Response regulator receiver domain IRT44_14780 PF00989 PAS fold IRT44_14780 PF00512 His Kinase A (phospho-acceptor) domain IRT44_14780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_14780 PF16736 Single Cache-like IRT44_14785 PF00581 Rhodanese-like domain IRT44_14785 PF12368 Rhodanase C-terminal IRT44_14785 PF17773 UPF0176 acylphosphatase like domain IRT44_14810 PF00692 dUTPase IRT44_14815 PF03473 MOSC domain IRT44_14815 PF03475 3-alpha domain IRT44_14825 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_14830 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_14835 PF00005 ABC transporter IRT44_14835 PF17850 CysA C-terminal regulatory domain IRT44_14835 PF12857 TOBE-like domain IRT44_14840 PF00005 ABC transporter IRT44_14840 PF12848 ABC transporter IRT44_14845 PF17853 GGDEF-like domain IRT44_14845 PF13556 PucR C-terminal helix-turn-helix domain IRT44_14845 PF07905 Purine catabolism regulatory protein-like family IRT44_14850 PF11755 Protein of unknown function (DUF3311) IRT44_14855 PF00474 Sodium:solute symporter family IRT44_14860 PF07969 Amidohydrolase family IRT44_14870 PF00795 Carbon-nitrogen hydrolase IRT44_14870 PF00583 Acetyltransferase (GNAT) family IRT44_14890 PF00989 PAS fold IRT44_14890 PF02954 Bacterial regulatory protein, Fis family IRT44_14890 PF00158 Sigma-54 interaction domain IRT44_14895 PF00180 Isocitrate/isopropylmalate dehydrogenase IRT44_14900 PF00171 Aldehyde dehydrogenase family IRT44_14910 PF00005 ABC transporter IRT44_14915 PF00005 ABC transporter IRT44_14920 PF02361 Cobalt transport protein IRT44_14925 PF12822 ECF transporter, substrate-specific component IRT44_14930 PF07687 Peptidase dimerisation domain IRT44_14930 PF01546 Peptidase family M20/M25/M40 IRT44_14935 PF07690 Major Facilitator Superfamily IRT44_14940 PF01432 Peptidase family M3 IRT44_14940 PF08439 Oligopeptidase F IRT44_14960 PF00535 Glycosyl transferase family 2 IRT44_14965 PF00072 Response regulator receiver domain IRT44_14965 PF00486 Transcriptional regulatory protein, C terminal IRT44_14970 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_14970 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_14970 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_14980 PF01476 LysM domain IRT44_14980 PF00877 NlpC/P60 family IRT44_15010 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_15015 PF00877 NlpC/P60 family IRT44_15025 PF00589 Phage integrase family IRT44_15025 PF13495 Phage integrase, N-terminal SAM-like domain IRT44_15030 PF00155 Aminotransferase class I and II IRT44_15035 PF01370 NAD dependent epimerase/dehydratase family IRT44_15040 PF00395 S-layer homology domain IRT44_15050 PF01230 HIT domain IRT44_15055 PF01568 Molydopterin dinucleotide binding domain IRT44_15055 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IRT44_15055 PF00037 4Fe-4S binding domain IRT44_15055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IRT44_15055 PF00384 Molybdopterin oxidoreductase IRT44_15060 PF07849 Protein of unknown function (DUF1641) IRT44_15065 PF10057 Uncharacterized conserved protein (DUF2294) IRT44_15070 PF07075 Protein of unknown function (DUF1343) IRT44_15075 PF00144 Beta-lactamase IRT44_15080 PF01915 Glycosyl hydrolase family 3 C-terminal domain IRT44_15080 PF00933 Glycosyl hydrolase family 3 N terminal domain IRT44_15090 PF00696 Amino acid kinase family IRT44_15090 PF13840 ACT domain IRT44_15095 PF07690 Major Facilitator Superfamily IRT44_15105 PF01048 Phosphorylase superfamily IRT44_15120 PF00768 D-alanyl-D-alanine carboxypeptidase IRT44_15120 PF07943 Penicillin-binding protein 5, C-terminal domain IRT44_15125 PF04607 Region found in RelA / SpoT proteins IRT44_15135 PF00269 Small, acid-soluble spore proteins, alpha/beta type IRT44_15140 PF01367 5'-3' exonuclease, C-terminal SAM fold IRT44_15140 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IRT44_15140 PF00476 DNA polymerase family A IRT44_15150 PF07728 AAA domain (dynein-related subfamily) IRT44_15150 PF17868 AAA lid domain IRT44_15150 PF12592 Protein of unknown function (DUF3763) IRT44_15180 PF00324 Amino acid permease IRT44_15200 PF00188 Cysteine-rich secretory protein family IRT44_15205 PF01327 Polypeptide deformylase IRT44_15220 PF01047 MarR family IRT44_15230 PF04235 Protein of unknown function (DUF418) IRT44_15235 PF05525 Branched-chain amino acid transport protein IRT44_15245 PF00860 Permease family IRT44_15250 PF07286 Protein of unknown function (DUF1445) IRT44_15260 PF03746 LamB/YcsF family IRT44_15265 PF02626 Carboxyltransferase domain, subdomain A and B IRT44_15270 PF02682 Carboxyltransferase domain, subdomain C and D IRT44_15285 PF13439 Glycosyltransferase Family 4 IRT44_15285 PF00534 Glycosyl transferases group 1 IRT44_15290 PF09084 NMT1/THI5 like IRT44_15295 PF00528 Binding-protein-dependent transport system inner membrane component IRT44_15300 PF00005 ABC transporter IRT44_15305 PF03070 TENA/THI-4/PQQC family IRT44_15310 PF07687 Peptidase dimerisation domain IRT44_15310 PF01546 Peptidase family M20/M25/M40 IRT44_15315 PF05690 Thiazole biosynthesis protein ThiG IRT44_15320 PF02597 ThiS family IRT44_15330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IRT44_15330 PF01411 tRNA synthetases class II (A) IRT44_15330 PF02272 DHHA1 domain IRT44_15340 PF01476 LysM domain IRT44_15340 PF00704 Glycosyl hydrolases family 18 IRT44_15350 PF00171 Aldehyde dehydrogenase family IRT44_15380 PF00395 S-layer homology domain IRT44_15380 PF00963 Cohesin domain IRT44_15405 PF00465 Iron-containing alcohol dehydrogenase IRT44_15455 PF09587 Bacterial capsule synthesis protein PGA_cap IRT44_15460 PF00578 AhpC/TSA family IRT44_15465 PF02683 Cytochrome C biogenesis protein transmembrane region IRT44_15470 PF00512 His Kinase A (phospho-acceptor) domain IRT44_15470 PF00989 PAS fold IRT44_15470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_15475 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IRT44_15485 PF02581 Thiamine monophosphate synthase IRT44_15490 PF02581 Thiamine monophosphate synthase IRT44_15510 PF01970 Tripartite tricarboxylate transporter TctA family IRT44_15520 PF03401 Tripartite tricarboxylate transporter family receptor IRT44_15525 PF00072 Response regulator receiver domain IRT44_15525 PF12431 Transcriptional regulator IRT44_15530 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IRT44_15530 PF00989 PAS fold IRT44_15530 PF17203 Single cache domain 3 IRT44_15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_15535 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IRT44_15540 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IRT44_15545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_15545 PF00672 HAMP domain IRT44_15545 PF12729 Four helix bundle sensory module for signal transduction IRT44_15560 PF00795 Carbon-nitrogen hydrolase IRT44_15565 PF01979 Amidohydrolase family IRT44_15570 PF01180 Dihydroorotate dehydrogenase IRT44_15575 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IRT44_15575 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_15595 PF06445 GyrI-like small molecule binding domain IRT44_15595 PF12833 Helix-turn-helix domain IRT44_15600 PF00202 Aminotransferase class-III IRT44_15605 PF00171 Aldehyde dehydrogenase family IRT44_15615 PF00082 Subtilase family IRT44_15620 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_15620 PF17866 AAA lid domain IRT44_15635 PF03989 DNA gyrase C-terminal domain, beta-propeller IRT44_15635 PF00521 DNA gyrase/topoisomerase IV, subunit A IRT44_15640 PF00986 DNA gyrase B subunit, carboxyl terminus IRT44_15640 PF00204 DNA gyrase B IRT44_15640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_15640 PF01751 Toprim domain IRT44_15645 PF01709 Transcriptional regulator IRT44_15650 PF00899 ThiF family IRT44_15670 PF13426 PAS domain IRT44_15670 PF13188 PAS domain IRT44_15670 PF00989 PAS fold IRT44_15670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_15670 PF00512 His Kinase A (phospho-acceptor) domain IRT44_15675 PF08338 Domain of unknown function (DUF1731) IRT44_15675 PF01370 NAD dependent epimerase/dehydratase family IRT44_15690 PF00005 ABC transporter IRT44_15710 PF08281 Sigma-70, region 4 IRT44_15710 PF04542 Sigma-70 region 2 IRT44_15715 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_15720 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IRT44_15725 PF07486 Cell Wall Hydrolase IRT44_15725 PF01471 Putative peptidoglycan binding domain IRT44_15735 PF04284 Protein of unknown function (DUF441) IRT44_15750 PF10720 Protein of unknown function (DUF2515) IRT44_15760 PF07285 Protein of unknown function (DUF1444) IRT44_15765 PF13037 Domain of unknown function (DUF3898) IRT44_15765 PF13039 Protein of unknown function (DUF3900) IRT44_15770 PF00069 Protein kinase domain IRT44_15780 PF00271 Helicase conserved C-terminal domain IRT44_15780 PF00270 DEAD/DEAH box helicase IRT44_15790 PF12708 Pectate lyase superfamily protein IRT44_15790 PF09992 Phosphodiester glycosidase IRT44_15815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IRT44_15815 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_15820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IRT44_15820 PF00364 Biotin-requiring enzyme IRT44_15820 PF02817 e3 binding domain IRT44_15825 PF02780 Transketolase, C-terminal domain IRT44_15825 PF02779 Transketolase, pyrimidine binding domain IRT44_15830 PF00676 Dehydrogenase E1 component IRT44_15845 PF13520 Amino acid permease IRT44_15855 PF01521 Iron-sulphur cluster biosynthesis IRT44_15860 PF13538 UvrD-like helicase C-terminal domain IRT44_15865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IRT44_15870 PF05979 Bacterial protein of unknown function (DUF896) IRT44_15880 PF01726 LexA DNA binding domain IRT44_15880 PF00717 Peptidase S24-like IRT44_15900 PF03951 Glutamine synthetase, beta-Grasp domain IRT44_15900 PF00120 Glutamine synthetase, catalytic domain IRT44_15905 PF13411 MerR HTH family regulatory protein IRT44_15910 PF06838 Methionine gamma-lyase IRT44_15915 PF16360 GTP-binding GTPase Middle Region IRT44_15915 PF13167 GTP-binding GTPase N-terminal IRT44_15915 PF01926 50S ribosome-binding GTPase IRT44_15920 PF17866 AAA lid domain IRT44_15920 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_15930 PF17209 Hfq protein IRT44_15940 PF04445 Putative SAM-dependent methyltransferase IRT44_15945 PF08676 MutL C terminal dimerisation domain IRT44_15945 PF01119 DNA mismatch repair protein, C-terminal domain IRT44_15950 PF01624 MutS domain I IRT44_15950 PF05190 MutS family domain IV IRT44_15950 PF00488 MutS domain V IRT44_15950 PF05192 MutS domain III IRT44_15960 PF10628 Outer spore coat protein E (CotE) IRT44_15965 PF06133 Control of competence regulator ComK, YlbF/YmcA IRT44_15970 PF04055 Radical SAM superfamily IRT44_15970 PF01938 TRAM domain IRT44_15970 PF00919 Uncharacterized protein family UPF0004 IRT44_15975 PF00395 S-layer homology domain IRT44_15975 PF00963 Cohesin domain IRT44_15980 PF03099 Biotin/lipoate A/B protein ligase family IRT44_16000 PF06962 Putative rRNA methylase IRT44_16005 PF12706 Beta-lactamase superfamily domain IRT44_16015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_16020 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg IRT44_16020 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II IRT44_16020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase IRT44_16025 PF01244 Membrane dipeptidase (Peptidase family M19) IRT44_16030 PF04232 Stage V sporulation protein S (SpoVS) IRT44_16035 PF13277 YmdB-like protein IRT44_16040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_16045 PF01966 HD domain IRT44_16045 PF00013 KH domain IRT44_16045 PF12072 Domain of unknown function (DUF3552) IRT44_16050 PF02631 RecX family IRT44_16055 PF00154 recA bacterial DNA recombination protein IRT44_16060 PF00270 DEAD/DEAH box helicase IRT44_16060 PF00271 Helicase conserved C-terminal domain IRT44_16065 PF02464 Competence-damaged protein IRT44_16065 PF18146 Damage-inducible protein CinA KH domain IRT44_16065 PF00994 Probable molybdopterin binding domain IRT44_16070 PF01066 CDP-alcohol phosphatidyltransferase IRT44_16075 PF18693 TRAM domain IRT44_16075 PF00919 Uncharacterized protein family UPF0004 IRT44_16075 PF04055 Radical SAM superfamily IRT44_16080 PF13464 Domain of unknown function (DUF4115) IRT44_16085 PF11868 Protein of unknown function (DUF3388) IRT44_16090 PF11588 Protein of unknown function (DUF3243) IRT44_16100 PF00675 Insulinase (Peptidase family M16) IRT44_16100 PF05193 Peptidase M16 inactive domain IRT44_16105 PF05193 Peptidase M16 inactive domain IRT44_16115 PF02653 Branched-chain amino acid transport system / permease component IRT44_16120 PF02653 Branched-chain amino acid transport system / permease component IRT44_16125 PF00005 ABC transporter IRT44_16130 PF02608 ABC transporter substrate-binding protein PnrA-like IRT44_16135 PF07702 UTRA domain IRT44_16135 PF00392 Bacterial regulatory proteins, gntR family IRT44_16150 PF00574 Clp protease IRT44_16160 PF00753 Metallo-beta-lactamase superfamily IRT44_16160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IRT44_16160 PF17770 Ribonuclease J C-terminal domain IRT44_16165 PF00701 Dihydrodipicolinate synthetase family IRT44_16170 PF00696 Amino acid kinase family IRT44_16170 PF13840 ACT domain IRT44_16175 PF01118 Semialdehyde dehydrogenase, NAD binding domain IRT44_16175 PF02774 Semialdehyde dehydrogenase, dimerisation domain IRT44_16180 PF02441 Flavoprotein IRT44_16185 PF16924 Dipicolinate synthase subunit A N-terminal domain IRT44_16185 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IRT44_16190 PF05239 PRC-barrel domain IRT44_16195 PF00675 Insulinase (Peptidase family M16) IRT44_16195 PF05193 Peptidase M16 inactive domain IRT44_16200 PF01522 Polysaccharide deacetylase IRT44_16205 PF00013 KH domain IRT44_16205 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IRT44_16205 PF01138 3' exoribonuclease family, domain 1 IRT44_16205 PF03725 3' exoribonuclease family, domain 2 IRT44_16205 PF00575 S1 RNA binding domain IRT44_16210 PF00312 Ribosomal protein S15 IRT44_16215 PF01687 Riboflavin kinase IRT44_16215 PF06574 FAD synthetase IRT44_16220 PF16198 tRNA pseudouridylate synthase B C-terminal domain IRT44_16220 PF01509 TruB family pseudouridylate synthase (N terminal domain) IRT44_16225 PF01368 DHH family IRT44_16225 PF02272 DHHA1 domain IRT44_16230 PF02033 Ribosome-binding factor A IRT44_16240 PF00009 Elongation factor Tu GTP binding domain IRT44_16240 PF11987 Translation-initiation factor 2 IRT44_16240 PF04760 Translation initiation factor IF-2, N-terminal region IRT44_16245 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family IRT44_16250 PF04296 Protein of unknown function (DUF448) IRT44_16255 PF00575 S1 RNA binding domain IRT44_16255 PF08529 NusA N-terminal domain IRT44_16255 PF13184 NusA-like KH domain IRT44_16260 PF17384 RimP C-terminal SH3 domain IRT44_16260 PF02576 RimP N-terminal domain IRT44_16265 PF14579 Helix-hairpin-helix motif IRT44_16265 PF00929 Exonuclease IRT44_16265 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IRT44_16265 PF14480 DNA polymerase III polC-type N-terminus I IRT44_16265 PF11490 DNA polymerase III polC-type N-terminus II IRT44_16265 PF02811 PHP domain IRT44_16265 PF07733 Bacterial DNA polymerase III alpha NTPase domain IRT44_16270 PF04073 Aminoacyl-tRNA editing domain IRT44_16270 PF03129 Anticodon binding domain IRT44_16270 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IRT44_16275 PF04551 GcpE protein IRT44_16280 PF13180 PDZ domain IRT44_16280 PF02163 Peptidase family M50 IRT44_16285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IRT44_16285 PF13288 DXP reductoisomerase C-terminal domain IRT44_16285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IRT44_16295 PF01255 Putative undecaprenyl diphosphate synthase IRT44_16300 PF01765 Ribosome recycling factor IRT44_16305 PF00696 Amino acid kinase family IRT44_16310 PF00889 Elongation factor TS IRT44_16315 PF00318 Ribosomal protein S2 IRT44_16340 PF04539 Sigma-70 region 3 IRT44_16340 PF04545 Sigma-70, region 4 IRT44_16340 PF04542 Sigma-70 region 2 IRT44_16350 PF03975 CheD chemotactic sensory transduction IRT44_16355 PF04509 CheC-like family IRT44_16360 PF01584 CheW-like domain IRT44_16365 PF02895 Signal transducing histidine kinase, homodimeric domain IRT44_16365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_16365 PF01627 Hpt domain IRT44_16365 PF07194 P2 response regulator binding domain IRT44_16365 PF01584 CheW-like domain IRT44_16370 PF01339 CheB methylesterase IRT44_16370 PF00072 Response regulator receiver domain IRT44_16375 PF10609 NUBPL iron-transfer P-loop NTPase IRT44_16380 PF00448 SRP54-type protein, GTPase domain IRT44_16385 PF00771 FHIPEP family IRT44_16390 PF01312 FlhB HrpN YscU SpaS Family IRT44_16395 PF01311 Bacterial export proteins, family 1 IRT44_16400 PF01313 Bacterial export proteins, family 3 IRT44_16410 PF04347 Flagellar biosynthesis protein, FliO IRT44_16415 PF00072 Response regulator receiver domain IRT44_16420 PF04509 CheC-like family IRT44_16420 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IRT44_16425 PF02154 Flagellar motor switch protein FliM IRT44_16425 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IRT44_16440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_16440 PF00460 Flagella basal body rod protein IRT44_16460 PF02050 Flagellar FliJ protein IRT44_16465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IRT44_16465 PF02874 ATP synthase alpha/beta family, beta-barrel domain IRT44_16465 PF18269 T3SS EscN ATPase C-terminal domain IRT44_16475 PF14842 FliG N-terminal domain IRT44_16475 PF14841 FliG middle domain IRT44_16475 PF01706 FliG C-terminal domain IRT44_16480 PF01514 Secretory protein of YscJ/FliF family IRT44_16480 PF08345 Flagellar M-ring protein C-terminal IRT44_16485 PF02049 Flagellar hook-basal body complex protein FliE IRT44_16490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IRT44_16490 PF00460 Flagella basal body rod protein IRT44_16495 PF00460 Flagella basal body rod protein IRT44_16500 PF08222 CodY helix-turn-helix domain IRT44_16500 PF06018 CodY GAF-like domain IRT44_16505 PF07724 AAA domain (Cdc48 subfamily) IRT44_16505 PF00004 ATPase family associated with various cellular activities (AAA) IRT44_16505 PF10431 C-terminal, D2-small domain, of ClpB protein IRT44_16510 PF00227 Proteasome subunit IRT44_16515 PF00589 Phage integrase family IRT44_16515 PF02899 Phage integrase, N-terminal SAM-like domain IRT44_16520 PF01134 Glucose inhibited division protein A IRT44_16525 PF01396 Topoisomerase DNA binding C4 zinc finger IRT44_16525 PF01131 DNA topoisomerase IRT44_16525 PF01751 Toprim domain IRT44_16530 PF02481 DNA recombination-mediator protein A IRT44_16530 PF17782 DprA winged helix domain IRT44_16535 PF02629 CoA binding domain IRT44_16535 PF00549 CoA-ligase IRT44_16540 PF08442 ATP-grasp domain IRT44_16540 PF00549 CoA-ligase IRT44_16550 PF01906 Putative heavy-metal-binding IRT44_16560 PF01418 Helix-turn-helix domain, rpiR family IRT44_16560 PF01380 SIS domain IRT44_16570 PF13171 Protein of unknown function (DUF4004) IRT44_16590 PF09339 IclR helix-turn-helix domain IRT44_16590 PF01614 Bacterial transcriptional regulator IRT44_16600 PF00294 pfkB family carbohydrate kinase IRT44_16610 PF00920 Dehydratase family IRT44_16615 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IRT44_16615 PF13378 Enolase C-terminal domain-like IRT44_16625 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_16630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_16630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_16630 PF01842 ACT domain IRT44_16635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IRT44_16640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IRT44_16645 PF03480 Bacterial extracellular solute-binding protein, family 7 IRT44_16650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_16650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_16655 PF07690 Major Facilitator Superfamily IRT44_16660 PF03853 YjeF-related protein N-terminus IRT44_16660 PF01256 Carbohydrate kinase IRT44_16665 PF01223 DNA/RNA non-specific endonuclease IRT44_16690 PF03992 Antibiotic biosynthesis monooxygenase IRT44_16695 PF00756 Putative esterase IRT44_16700 PF01032 FecCD transport family IRT44_16705 PF01032 FecCD transport family IRT44_16710 PF01497 Periplasmic binding protein IRT44_16715 PF01520 N-acetylmuramoyl-L-alanine amidase IRT44_16730 PF13386 Cytochrome C biogenesis protein transmembrane region IRT44_16735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IRT44_16735 PF01568 Molydopterin dinucleotide binding domain IRT44_16735 PF00384 Molybdopterin oxidoreductase IRT44_16740 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_16745 PF02652 L-lactate permease IRT44_16755 PF13183 4Fe-4S dicluster domain IRT44_16755 PF02754 Cysteine-rich domain IRT44_16760 PF02913 FAD linked oxidases, C-terminal domain IRT44_16760 PF01565 FAD binding domain IRT44_16765 PF07729 FCD domain IRT44_16765 PF00392 Bacterial regulatory proteins, gntR family IRT44_16770 PF01274 Malate synthase IRT44_16795 PF01266 FAD dependent oxidoreductase IRT44_16850 PF01523 Putative modulator of DNA gyrase IRT44_16855 PF01523 Putative modulator of DNA gyrase IRT44_16865 PF03358 NADPH-dependent FMN reductase IRT44_16885 PF12833 Helix-turn-helix domain IRT44_16885 PF06445 GyrI-like small molecule binding domain IRT44_16890 PF07883 Cupin domain IRT44_16895 PF04199 Putative cyclase IRT44_16900 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain IRT44_16900 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain IRT44_16905 PF01645 Conserved region in glutamate synthase IRT44_16905 PF13187 4Fe-4S dicluster domain IRT44_16910 PF00005 ABC transporter IRT44_16935 PF01810 LysE type translocator IRT44_16945 PF00155 Aminotransferase class I and II IRT44_16945 PF00392 Bacterial regulatory proteins, gntR family IRT44_16955 PF00005 ABC transporter IRT44_16955 PF16326 ABC transporter C-terminal domain IRT44_16955 PF12848 ABC transporter IRT44_16955 PF00005 ABC transporter IRT44_16955 PF16326 ABC transporter C-terminal domain IRT44_16955 PF12848 ABC transporter IRT44_16960 PF02557 D-alanyl-D-alanine carboxypeptidase IRT44_16965 PF01427 D-ala-D-ala dipeptidase IRT44_16970 PF07478 D-ala D-ala ligase C-terminus IRT44_16970 PF01820 D-ala D-ala ligase N-terminus IRT44_16975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IRT44_16975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IRT44_16980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_16980 PF00512 His Kinase A (phospho-acceptor) domain IRT44_16985 PF00072 Response regulator receiver domain IRT44_16985 PF00486 Transcriptional regulatory protein, C terminal IRT44_16995 PF13520 Amino acid permease IRT44_17000 PF02805 Metal binding domain of Ada IRT44_17000 PF12833 Helix-turn-helix domain IRT44_17010 PF00872 Transposase, Mutator family IRT44_17015 PF01966 HD domain IRT44_17015 PF13286 Phosphohydrolase-associated domain IRT44_17040 PF02586 SOS response associated peptidase (SRAP) IRT44_17045 PF00557 Metallopeptidase family M24 IRT44_17050 PF00294 pfkB family carbohydrate kinase IRT44_17055 PF00251 Glycosyl hydrolases family 32 N-terminal domain IRT44_17055 PF08244 Glycosyl hydrolases family 32 C terminal IRT44_17060 PF00367 phosphotransferase system, EIIB IRT44_17060 PF02378 Phosphotransferase system, EIIC IRT44_17065 PF00356 Bacterial regulatory proteins, lacI family IRT44_17065 PF13407 Periplasmic binding protein domain IRT44_17070 PF00850 Histone deacetylase domain IRT44_17075 PF07690 Major Facilitator Superfamily IRT44_17080 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain IRT44_17080 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase IRT44_17095 PF00202 Aminotransferase class-III IRT44_17100 PF17329 Family of unknown function (DUF5367) IRT44_17105 PF00440 Bacterial regulatory proteins, tetR family IRT44_17140 PF00583 Acetyltransferase (GNAT) family IRT44_17150 PF06445 GyrI-like small molecule binding domain IRT44_17150 PF12833 Helix-turn-helix domain IRT44_17155 PF00394 Multicopper oxidase IRT44_17155 PF07731 Multicopper oxidase IRT44_17155 PF07732 Multicopper oxidase IRT44_17160 PF00672 HAMP domain IRT44_17160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IRT44_17160 PF00512 His Kinase A (phospho-acceptor) domain IRT44_17165 PF00486 Transcriptional regulatory protein, C terminal IRT44_17165 PF00072 Response regulator receiver domain IRT44_17170 PF07690 Major Facilitator Superfamily IRT44_17180 PF01757 Acyltransferase family IRT44_17185 PF01757 Acyltransferase family IRT44_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_17190 PF03466 LysR substrate binding domain IRT44_17195 PF03358 NADPH-dependent FMN reductase IRT44_17200 PF01695 IstB-like ATP binding protein IRT44_17205 PF00665 Integrase core domain IRT44_17205 PF02796 Helix-turn-helix domain of resolvase IRT44_17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IRT44_17210 PF03466 LysR substrate binding domain IRT44_17215 PF02423 Ornithine cyclodeaminase/mu-crystallin family IRT44_17220 PF00155 Aminotransferase class I and II IRT44_17225 PF02583 Metal-sensitive transcriptional repressor IRT44_17230 PF13686 DsrE/DsrF/DrsH-like family IRT44_17235 PF01206 Sulfurtransferase TusA IRT44_17240 PF00581 Rhodanese-like domain IRT44_17240 PF00753 Metallo-beta-lactamase superfamily IRT44_17245 PF00581 Rhodanese-like domain IRT44_17245 PF01206 Sulfurtransferase TusA IRT44_17250 PF01925 Sulfite exporter TauE/SafE IRT44_17280 PF01883 Iron-sulfur cluster assembly protein IRT44_17285 PF00115 Cytochrome C and Quinol oxidase polypeptide I IRT44_17290 PF00325 Bacterial regulatory proteins, crp family IRT44_17290 PF00027 Cyclic nucleotide-binding domain IRT44_17300 PF04343 Protein of unknown function, DUF488 IRT44_17310 PF13335 Magnesium chelatase, subunit ChlI C-terminal IRT44_17310 PF01078 Magnesium chelatase, subunit ChlI IRT44_17315 PF02021 Uncharacterised protein family UPF0102 IRT44_17320 PF01312 FlhB HrpN YscU SpaS Family IRT44_17330 PF01351 Ribonuclease HII IRT44_17335 PF01926 50S ribosome-binding GTPase IRT44_17340 PF10502 Signal peptidase, peptidase S26 IRT44_17345 PF01245 Ribosomal protein L19 IRT44_17350 PF01746 tRNA (Guanine-1)-methyltransferase IRT44_17355 PF05239 PRC-barrel domain IRT44_17355 PF01782 RimM N-terminal domain IRT44_17360 PF11068 YlqD protein IRT44_17370 PF00886 Ribosomal protein S16 IRT44_17375 PF00448 SRP54-type protein, GTPase domain IRT44_17375 PF02881 SRP54-type protein, helical bundle domain IRT44_17375 PF02978 Signal peptide binding domain IRT44_17380 PF04297 Putative helix-turn-helix protein, YlxM / p13 like IRT44_17400 PF00005 ABC transporter IRT44_17425 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_17430 PF00448 SRP54-type protein, GTPase domain IRT44_17430 PF02881 SRP54-type protein, helical bundle domain IRT44_17435 PF06470 SMC proteins Flexible Hinge Domain IRT44_17435 PF02463 RecF/RecN/SMC N terminal domain IRT44_17440 PF00120 Glutamine synthetase, catalytic domain IRT44_17445 PF00324 Amino acid permease IRT44_17455 PF00158 Sigma-54 interaction domain IRT44_17455 PF13426 PAS domain IRT44_17455 PF02954 Bacterial regulatory protein, Fis family IRT44_17460 PF00035 Double-stranded RNA binding motif IRT44_17460 PF14622 Ribonuclease-III-like IRT44_17465 PF00109 Beta-ketoacyl synthase, N-terminal domain IRT44_17465 PF02801 Beta-ketoacyl synthase, C-terminal domain IRT44_17470 PF00550 Phosphopantetheine attachment site IRT44_17480 PF00698 Acyl transferase domain IRT44_17485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IRT44_17485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IRT44_17490 PF02504 Fatty acid synthesis protein IRT44_17495 PF03061 Thioesterase superfamily IRT44_17500 PF01783 Ribosomal L32p protein family IRT44_17510 PF05362 Lon protease (S16) C-terminal proteolytic domain IRT44_17510 PF13180 PDZ domain IRT44_17515 PF01734 Patatin-like phospholipase IRT44_17520 PF07670 Nucleoside recognition IRT44_17525 PF01467 Cytidylyltransferase-like IRT44_17540 PF13302 Acetyltransferase (GNAT) domain IRT44_17550 PF02735 Ku70/Ku80 beta-barrel domain IRT44_17565 PF16916 Dimerisation domain of Zinc Transporter IRT44_17565 PF01545 Cation efflux family IRT44_17570 PF13667 ThiC-associated domain IRT44_17570 PF01964 Radical SAM ThiC family IRT44_17580 PF01068 ATP dependent DNA ligase domain IRT44_17580 PF04679 ATP dependent DNA ligase C terminal region IRT44_17595 PF05504 Spore germination B3/ GerAC like, C-terminal IRT44_17600 PF03323 Bacillus/Clostridium GerA spore germination protein IRT44_17605 PF13298 DNA polymerase Ligase (LigD) IRT44_17605 PF04679 ATP dependent DNA ligase C terminal region IRT44_17605 PF01068 ATP dependent DNA ligase domain IRT44_17610 PF01790 Prolipoprotein diacylglyceryl transferase IRT44_17620 PF00682 HMGL-like IRT44_17620 PF07836 DmpG-like communication domain IRT44_17625 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation IRT44_17625 PF01118 Semialdehyde dehydrogenase, NAD binding domain IRT44_17630 PF01557 Fumarylacetoacetate (FAA) hydrolase family IRT44_17635 PF00171 Aldehyde dehydrogenase family IRT44_17640 PF01042 Endoribonuclease L-PSP IRT44_17650 PF06052 3-hydroxyanthranilic acid dioxygenase IRT44_17655 PF01361 Tautomerase enzyme IRT44_17660 PF03358 NADPH-dependent FMN reductase IRT44_17665 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal IRT44_17665 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal IRT44_17675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IRT44_17695 PF01384 Phosphate transporter family IRT44_17705 PF00990 Diguanylate cyclase, GGDEF domain IRT44_17705 PF08448 PAS fold IRT44_17710 PF07690 Major Facilitator Superfamily IRT44_17715 PF02797 Chalcone and stilbene synthases, C-terminal domain IRT44_17715 PF00195 Chalcone and stilbene synthases, N-terminal domain IRT44_17720 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family IRT44_17735 PF01047 MarR family IRT44_17740 PF10502 Signal peptidase, peptidase S26 IRT44_17755 PF04542 Sigma-70 region 2 IRT44_17755 PF08281 Sigma-70, region 4 IRT44_17760 PF02557 D-alanyl-D-alanine carboxypeptidase IRT44_17770 PF12708 Pectate lyase superfamily protein IRT44_17770 PF09992 Phosphodiester glycosidase IRT44_17795 PF17863 AAA lid domain IRT44_17795 PF07726 ATPase family associated with various cellular activities (AAA) IRT44_17820 PF00534 Glycosyl transferases group 1 IRT44_17820 PF13439 Glycosyltransferase Family 4 IRT44_17825 PF01636 Phosphotransferase enzyme family IRT44_17835 PF01370 NAD dependent epimerase/dehydratase family IRT44_17850 PF11007 Spore coat associated protein JA (CotJA) IRT44_17855 PF05067 Manganese containing catalase IRT44_17880 PF00817 impB/mucB/samB family IRT44_17880 PF11799 impB/mucB/samB family C-terminal domain IRT44_17895 PF00270 DEAD/DEAH box helicase IRT44_17895 PF00271 Helicase conserved C-terminal domain IRT44_17895 PF17191 RecG wedge domain IRT44_17900 PF03313 Serine dehydratase alpha chain IRT44_17905 PF01842 ACT domain IRT44_17905 PF03315 Serine dehydratase beta chain IRT44_17910 PF02645 Uncharacterised protein, DegV family COG1307 IRT44_17915 PF13684 Dihydroxyacetone kinase family IRT44_17915 PF02734 DAK2 domain IRT44_17920 PF03780 Asp23 family, cell envelope-related function IRT44_17925 PF00830 Ribosomal L28 family IRT44_17930 PF08183 Stage V sporulation protein family IRT44_17935 PF09515 Thiamine transporter protein (Thia_YuaJ) IRT44_17940 PF00005 ABC transporter IRT44_17950 PF07687 Peptidase dimerisation domain IRT44_17950 PF01546 Peptidase family M20/M25/M40 IRT44_17960 PF00834 Ribulose-phosphate 3 epimerase family IRT44_17965 PF03193 RsgA GTPase IRT44_17965 PF16745 RsgA N-terminal domain IRT44_17970 PF00069 Protein kinase domain IRT44_17970 PF03793 PASTA domain IRT44_17980 PF04055 Radical SAM superfamily IRT44_17985 PF01029 NusB family IRT44_17985 PF01189 16S rRNA methyltransferase RsmB/F IRT44_17990 PF02911 Formyl transferase, C-terminal domain IRT44_17990 PF00551 Formyl transferase IRT44_17995 PF01327 Polypeptide deformylase IRT44_18000 PF00271 Helicase conserved C-terminal domain IRT44_18000 PF18074 Primosomal protein N C-terminal domain IRT44_18000 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IRT44_18000 PF04851 Type III restriction enzyme, res subunit IRT44_18000 PF17764 3′ DNA-binding domain (3′BD) IRT44_18005 PF04127 DNA / pantothenate metabolism flavoprotein IRT44_18005 PF02441 Flavoprotein IRT44_18010 PF01192 RNA polymerase Rpb6 IRT44_18015 PF00625 Guanylate kinase IRT44_18020 PF04025 Domain of unknown function (DUF370) IRT44_18025 PF08340 Domain of unknown function (DUF1732) IRT44_18025 PF03755 YicC-like family, N-terminal region IRT44_18030 PF05670 NFACT protein RNA binding domain IRT44_18055 PF00378 Enoyl-CoA hydratase/isomerase IRT44_18075 PF00392 Bacterial regulatory proteins, gntR family IRT44_18075 PF07729 FCD domain IRT44_18090 PF03745 Domain of unknown function (DUF309) IRT44_18105 PF07301 Protein of unknown function (DUF1453) IRT44_18110 PF13520 Amino acid permease IRT44_18120 PF02423 Ornithine cyclodeaminase/mu-crystallin family IRT44_18125 PF07690 Major Facilitator Superfamily IRT44_18125 PF00083 Sugar (and other) transporter IRT44_18130 PF00857 Isochorismatase family IRT44_18135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IRT44_18135 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain IRT44_18135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IRT44_18140 PF01266 FAD dependent oxidoreductase IRT44_18140 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IRT44_18145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IRT44_18145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IRT44_18150 PF00230 Major intrinsic protein IRT44_18155 PF04309 Glycerol-3-phosphate responsive antiterminator IRT44_18160 PF03447 Homoserine dehydrogenase, NAD binding domain IRT44_18160 PF00742 Homoserine dehydrogenase IRT44_18160 PF01842 ACT domain IRT44_18170 PF00156 Phosphoribosyl transferase domain IRT44_18175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IRT44_18180 PF02142 MGS-like domain IRT44_18180 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IRT44_18180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_18185 PF00117 Glutamine amidotransferase class-I IRT44_18185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IRT44_18190 PF01979 Amidohydrolase family IRT44_18195 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IRT44_18195 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IRT44_18200 PF00860 Permease family IRT44_18205 PF00156 Phosphoribosyl transferase domain IRT44_18215 PF00849 RNA pseudouridylate synthase IRT44_18215 PF01479 S4 domain IRT44_18220 PF01252 Signal peptidase (SPase) II IRT44_18230 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IRT44_18230 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IRT44_18230 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IRT44_18230 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IRT44_18240 PF00483 Nucleotidyl transferase IRT44_18255 PF05067 Manganese containing catalase IRT44_18260 PF12652 CotJB protein IRT44_18285 PF04012 PspA/IM30 family IRT44_18290 PF01131 DNA topoisomerase IRT44_18290 PF01751 Toprim domain IRT44_18290 PF13342 C-terminal repeat of topoisomerase IRT44_18290 PF01396 Topoisomerase DNA binding C4 zinc finger IRT44_18310 PF03816 Cell envelope-related transcriptional attenuator domain IRT44_18315 PF07992 Pyridine nucleotide-disulphide oxidoreductase IRT44_18320 PF00293 NUDIX domain IRT44_18325 PF07690 Major Facilitator Superfamily IRT44_18330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IRT44_18330 PF13378 Enolase C-terminal domain-like IRT44_18335 PF01258 Prokaryotic dksA/traR C4-type zinc finger IRT44_18340 PF08264 Anticodon-binding domain of tRNA IRT44_18340 PF00133 tRNA synthetases class I (I, L, M and V) IRT44_18345 PF05103 DivIVA protein IRT44_18350 PF01479 S4 domain IRT44_18350 PF17774 Putative RNA-binding domain in YlmH IRT44_18355 PF02325 YGGT family IRT44_18360 PF04472 Cell division protein SepF IRT44_18365 PF01168 Alanine racemase, N-terminal domain IRT44_18370 PF02578 Multi-copper polyphenol oxidoreductase laccase IRT44_18375 PF05239 PRC-barrel domain IRT44_18380 PF04539 Sigma-70 region 3 IRT44_18380 PF04545 Sigma-70, region 4 IRT44_18380 PF04542 Sigma-70 region 2 IRT44_18385 PF04542 Sigma-70 region 2 IRT44_18385 PF04545 Sigma-70, region 4 IRT44_18390 PF03419 Sporulation factor SpoIIGA IRT44_18395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IRT44_18400 PF00005 ABC transporter IRT44_18405 PF01032 FecCD transport family IRT44_18410 PF01497 Periplasmic binding protein IRT44_18425 PF13333 Integrase core domain IRT44_18425 PF00665 Integrase core domain IRT44_18425 PF13276 HTH-like domain IRT44_18430 PF00091 Tubulin/FtsZ family, GTPase domain IRT44_18430 PF12327 FtsZ family, C-terminal domain IRT44_18435 PF02491 SHS2 domain inserted in FTSA IRT44_18440 PF06947 Protein of unknown function (DUF1290) IRT44_18450 PF05949 Bacterial protein of unknown function (DUF881) IRT44_18455 PF03799 Cell division protein FtsQ IRT44_18455 PF08478 POTRA domain, FtsQ-type IRT44_18460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IRT44_18465 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IRT44_18465 PF01565 FAD binding domain IRT44_18475 PF01098 Cell cycle protein IRT44_18480 PF08245 Mur ligase middle domain IRT44_18480 PF02875 Mur ligase family, glutamate ligase domain IRT44_18485 PF00953 Glycosyl transferase family 4 IRT44_18490 PF01225 Mur ligase family, catalytic domain IRT44_18490 PF08245 Mur ligase middle domain IRT44_18490 PF02875 Mur ligase family, glutamate ligase domain IRT44_18495 PF03793 PASTA domain IRT44_18495 PF00905 Penicillin binding protein transpeptidase domain IRT44_18495 PF03717 Penicillin-binding Protein dimerisation domain IRT44_18500 PF03717 Penicillin-binding Protein dimerisation domain IRT44_18500 PF00905 Penicillin binding protein transpeptidase domain IRT44_18500 PF03793 PASTA domain IRT44_18510 PF01795 MraW methylase family IRT44_18515 PF02381 MraZ protein, putative antitoxin-like IRT44_18520 PF05221 S-adenosyl-L-homocysteine hydrolase IRT44_18520 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain IRT44_18525 PF10079 Bacillithiol biosynthesis BshC IRT44_18530 PF01381 Helix-turn-helix IRT44_18540 PF08546 Ketopantoate reductase PanE/ApbA C terminal IRT44_18540 PF02558 Ketopantoate reductase PanE/ApbA IRT44_18545 PF01039 Carboxyl transferase domain IRT44_18550 PF00378 Enoyl-CoA hydratase/isomerase IRT44_18555 PF00682 HMGL-like IRT44_18560 PF00364 Biotin-requiring enzyme IRT44_18565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IRT44_18565 PF00289 Biotin carboxylase, N-terminal domain IRT44_18565 PF02785 Biotin carboxylase C-terminal domain IRT44_18570 PF00583 Acetyltransferase (GNAT) family IRT44_18580 PF00378 Enoyl-CoA hydratase/isomerase IRT44_18585 PF03960 ArsC family IRT44_18595 PF11117 Protein of unknown function (DUF2626) IRT44_18610 PF00753 Metallo-beta-lactamase superfamily IRT44_18635 PF13276 HTH-like domain IRT44_18635 PF00665 Integrase core domain IRT44_18640 PF13333 Integrase core domain IRT44_18640 PF00665 Integrase core domain IRT44_18640 PF13276 HTH-like domain IRT44_18645 PF13638 PIN domain IRT44_18645 PF02562 PhoH-like protein IRT44_18650 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) IRT44_18655 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_18660 PF01053 Cys/Met metabolism PLP-dependent enzyme IRT44_18690 PF01261 Xylose isomerase-like TIM barrel IRT44_18700 PF14492 Elongation Factor G, domain II IRT44_18700 PF00009 Elongation factor Tu GTP binding domain IRT44_18700 PF00679 Elongation factor G C-terminus IRT44_18700 PF03144 Elongation factor Tu domain 2 IRT44_18705 PF02675 S-adenosylmethionine decarboxylase IRT44_18730 PF06335 Protein of unknown function (DUF1054) IRT44_18735 PF03060 Nitronate monooxygenase IRT44_18740 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IRT44_18740 PF01276 Orn/Lys/Arg decarboxylase, major domain IRT44_18755 PF12146 Serine aminopeptidase, S33 IRT44_18785 PF01546 Peptidase family M20/M25/M40 IRT44_18785 PF07687 Peptidase dimerisation domain IRT44_18790 PF00202 Aminotransferase class-III IRT44_18795 PF00132 Bacterial transferase hexapeptide (six repeats) IRT44_18795 PF14602 Hexapeptide repeat of succinyl-transferase IRT44_18795 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal IRT44_18800 PF00258 Flavodoxin IRT44_18810 PF12787 EcsC protein family IRT44_18830 PF01209 ubiE/COQ5 methyltransferase family IRT44_18835 PF13533 Biotin-lipoyl like IRT44_18840 PF12704 MacB-like periplasmic core domain IRT44_18840 PF02687 FtsX-like permease family IRT44_18840 PF00005 ABC transporter IRT44_18845 PF12704 MacB-like periplasmic core domain IRT44_18845 PF02687 FtsX-like permease family IRT44_18845 PF00005 ABC transporter IRT44_18855 PF08543 Phosphomethylpyrimidine kinase IRT44_18860 PF00892 EamA-like transporter family IRT44_18925 PF02110 Hydroxyethylthiazole kinase family IRT44_18930 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_18930 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_18935 PF00294 pfkB family carbohydrate kinase IRT44_18940 PF04962 KduI/IolB family IRT44_18945 PF01261 Xylose isomerase-like TIM barrel IRT44_18950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IRT44_18950 PF00205 Thiamine pyrophosphate enzyme, central domain IRT44_18950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IRT44_18955 PF02653 Branched-chain amino acid transport system / permease component IRT44_18960 PF00005 ABC transporter IRT44_18965 PF13407 Periplasmic binding protein domain IRT44_18970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IRT44_18970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_18975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IRT44_18975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IRT44_18980 PF00356 Bacterial regulatory proteins, lacI family IRT44_18985 PF04892 VanZ like family IRT44_18990 PF03551 Transcriptional regulator PadR-like family IRT44_18995 PF00665 Integrase core domain IRT44_18995 PF02796 Helix-turn-helix domain of resolvase IRT44_19000 PF01695 IstB-like ATP binding protein IRT44_19015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IRT44_19020 PF04851 Type III restriction enzyme, res subunit IRT44_19020 PF00271 Helicase conserved C-terminal domain IRT44_19030 PF01230 HIT domain IRT44_19035 PF00535 Glycosyl transferase family 2 IRT44_19045 PF16363 GDP-mannose 4,6 dehydratase IRT44_19070 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IRT44_19070 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IRT44_19070 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IRT44_19080 PF08000 Bacterial PH domain IRT44_19090 PF02463 RecF/RecN/SMC N terminal domain IRT44_19110 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IRT44_19125 PF04608 Phosphatidylglycerophosphatase A IRT44_19145 PF13673 Acetyltransferase (GNAT) domain IRT44_19150 PF02811 PHP domain IRT44_19160 PF00753 Metallo-beta-lactamase superfamily IRT44_19160 PF16123 Hydroxyacylglutathione hydrolase C-terminus IRT44_19165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IRT44_19165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) IRT44_19170 PF01595 Cyclin M transmembrane N-terminal domain IRT44_19170 PF03471 Transporter associated domain IRT44_19170 PF00571 CBS domain