locus-tag class description GFC28_10 PF01039 Carboxyl transferase domain GFC28_100 PF00719 Inorganic pyrophosphatase GFC28_1001 PF00324 Amino acid permease GFC28_1002 PF02447 GntP family permease GFC28_1003 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC28_1003 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC28_1004 PF00356 Bacterial regulatory proteins, lacI family GFC28_1005 PF01047 MarR family GFC28_1005 PF00583 Acetyltransferase (GNAT) family GFC28_1007 PF00356 Bacterial regulatory proteins, lacI family GFC28_1007 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GFC28_1008 PF00583 Acetyltransferase (GNAT) family GFC28_1009 PF08818 Domain of unknown function (DU1801) GFC28_1011 PF01022 Bacterial regulatory protein, arsR family GFC28_1015 PF07875 Coat F domain GFC28_1017 PF00753 Metallo-beta-lactamase superfamily GFC28_1018 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1022 PF13426 PAS domain GFC28_1022 PF07228 Stage II sporulation protein E (SpoIIE) GFC28_1026 PF01266 FAD dependent oxidoreductase GFC28_1028 PF13411 MerR HTH family regulatory protein GFC28_1028 PF06445 GyrI-like small molecule binding domain GFC28_1029 PF00294 pfkB family carbohydrate kinase GFC28_103 PF00271 Helicase conserved C-terminal domain GFC28_103 PF00270 DEAD/DEAH box helicase GFC28_1030 PF01081 KDPG and KHG aldolase GFC28_1031 PF01261 Xylose isomerase-like TIM barrel GFC28_1032 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC28_1032 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC28_1033 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC28_1033 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC28_1034 PF17676 LD-carboxypeptidase C-terminal domain GFC28_1034 PF02016 LD-carboxypeptidase N-terminal domain GFC28_1035 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GFC28_1038 PF00491 Arginase family GFC28_104 PF02517 CPBP intramembrane metalloprotease GFC28_1042 PF07690 Major Facilitator Superfamily GFC28_1043 PF01619 Proline dehydrogenase GFC28_1044 PF00171 Aldehyde dehydrogenase family GFC28_1045 PF17853 GGDEF-like domain GFC28_1045 PF13556 PucR C-terminal helix-turn-helix domain GFC28_1048 PF03611 PTS system sugar-specific permease component GFC28_1050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GFC28_1051 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1052 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1053 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC28_1053 PF00005 ABC transporter GFC28_1054 PF00005 ABC transporter GFC28_1054 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC28_1055 PF02743 Cache domain GFC28_1055 PF00672 HAMP domain GFC28_1055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1057 PF02653 Branched-chain amino acid transport system / permease component GFC28_1058 PF00005 ABC transporter GFC28_1059 PF13407 Periplasmic binding protein domain GFC28_1060 PF04397 LytTr DNA-binding domain GFC28_1060 PF00072 Response regulator receiver domain GFC28_1061 PF06580 Histidine kinase GFC28_1061 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1061 PF00672 HAMP domain GFC28_1061 PF02743 Cache domain GFC28_1062 PF13407 Periplasmic binding protein domain GFC28_1063 PF03707 Bacterial signalling protein N terminal repeat GFC28_1063 PF00563 EAL domain GFC28_1063 PF00990 Diguanylate cyclase, GGDEF domain GFC28_1067 PF00313 'Cold-shock' DNA-binding domain GFC28_1068 PF10782 Zinc-finger GFC28_1069 PF13456 Reverse transcriptase-like GFC28_107 PF05067 Manganese containing catalase GFC28_1070 PF13456 Reverse transcriptase-like GFC28_1073 PF02681 Divergent PAP2 family GFC28_1075 PF00694 Aconitase C-terminal domain GFC28_1075 PF00330 Aconitase family (aconitate hydratase) GFC28_1078 PF08179 Small acid-soluble spore protein P family GFC28_1079 PF07486 Cell Wall Hydrolase GFC28_108 PF12652 CotJB protein GFC28_1080 PF11084 Protein of unknown function (DUF2621) GFC28_1081 PF07301 Protein of unknown function (DUF1453) GFC28_1082 PF00072 Response regulator receiver domain GFC28_1083 PF02683 Cytochrome C biogenesis protein transmembrane region GFC28_1084 PF09388 Spo0E like sporulation regulatory protein GFC28_1085 PF03672 Uncharacterised protein family (UPF0154) GFC28_1087 PF02779 Transketolase, pyrimidine binding domain GFC28_1087 PF00456 Transketolase, thiamine diphosphate binding domain GFC28_1087 PF02780 Transketolase, C-terminal domain GFC28_1088 PF05979 Bacterial protein of unknown function (DUF896) GFC28_1089 PF00239 Resolvase, N terminal domain GFC28_109 PF11007 Spore coat associated protein JA (CotJA) GFC28_1090 PF01476 LysM domain GFC28_1091 PF00717 Peptidase S24-like GFC28_1091 PF01726 LexA DNA binding domain GFC28_1100 PF05257 CHAP domain GFC28_1100 PF01476 LysM domain GFC28_1101 PF13457 GW (Gly-Tryp) dipeptide domain GFC28_1101 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GFC28_1105 PF01551 Peptidase family M23 GFC28_1106 PF00872 Transposase, Mutator family GFC28_1107 PF01230 HIT domain GFC28_1108 PF03951 Glutamine synthetase, beta-Grasp domain GFC28_1108 PF00120 Glutamine synthetase, catalytic domain GFC28_1109 PF13411 MerR HTH family regulatory protein GFC28_111 PF00149 Calcineurin-like phosphoesterase GFC28_1110 PF06838 Methionine gamma-lyase GFC28_1111 PF16360 GTP-binding GTPase Middle Region GFC28_1111 PF13167 GTP-binding GTPase N-terminal GFC28_1111 PF01926 50S ribosome-binding GTPase GFC28_1112 PF03458 UPF0126 domain GFC28_1113 PF02803 Thiolase, C-terminal domain GFC28_1113 PF00108 Thiolase, N-terminal domain GFC28_1114 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC28_1114 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC28_1115 PF00501 AMP-binding enzyme GFC28_1115 PF13193 AMP-binding enzyme C-terminal domain GFC28_1116 PF02515 CoA-transferase family III GFC28_1118 PF13193 AMP-binding enzyme C-terminal domain GFC28_1118 PF00501 AMP-binding enzyme GFC28_1119 PF17866 AAA lid domain GFC28_1119 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_112 PF05389 Negative regulator of genetic competence (MecA) GFC28_1120 PF17209 Hfq protein GFC28_1122 PF12729 Four helix bundle sensory module for signal transduction GFC28_1122 PF00672 HAMP domain GFC28_1122 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1123 PF07690 Major Facilitator Superfamily GFC28_1124 PF07690 Major Facilitator Superfamily GFC28_1125 PF04519 Polymer-forming cytoskeletal GFC28_1126 PF04519 Polymer-forming cytoskeletal GFC28_1127 PF13171 Protein of unknown function (DUF4004) GFC28_1128 PF01522 Polysaccharide deacetylase GFC28_1128 PF00457 Glycosyl hydrolases family 11 GFC28_1128 PF03422 Carbohydrate binding module (family 6) GFC28_1129 PF02525 Flavodoxin-like fold GFC28_113 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFC28_113 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GFC28_1130 PF07987 Domain of unkown function (DUF1775) GFC28_1131 PF13115 YtkA-like GFC28_1131 PF05425 Copper resistance protein D GFC28_1131 PF04234 CopC domain GFC28_1132 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC28_1132 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC28_1134 PF03734 L,D-transpeptidase catalytic domain GFC28_1134 PF01476 LysM domain GFC28_1139 PF00005 ABC transporter GFC28_1139 PF13732 Domain of unknown function (DUF4162) GFC28_1140 PF00188 Cysteine-rich secretory protein family GFC28_1143 PF13580 SIS domain GFC28_1145 PF02378 Phosphotransferase system, EIIC GFC28_1145 PF00367 phosphotransferase system, EIIB GFC28_1146 PF01380 SIS domain GFC28_1146 PF01418 Helix-turn-helix domain, rpiR family GFC28_1147 PF01119 DNA mismatch repair protein, C-terminal domain GFC28_1147 PF08676 MutL C terminal dimerisation domain GFC28_1148 PF01624 MutS domain I GFC28_1148 PF05188 MutS domain II GFC28_1148 PF05192 MutS domain III GFC28_1148 PF05190 MutS family domain IV GFC28_1148 PF00488 MutS domain V GFC28_1149 PF10628 Outer spore coat protein E (CotE) GFC28_115 PF00710 Asparaginase, N-terminal GFC28_115 PF17763 Glutaminase/Asparaginase C-terminal domain GFC28_1151 PF06133 Control of competence regulator ComK, YlbF/YmcA GFC28_1152 PF01938 TRAM domain GFC28_1152 PF00919 Uncharacterized protein family UPF0004 GFC28_1152 PF04055 Radical SAM superfamily GFC28_1153 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC28_1154 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GFC28_1154 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GFC28_1154 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GFC28_1156 PF04232 Stage V sporulation protein S (SpoVS) GFC28_1157 PF13277 YmdB-like protein GFC28_1158 PF01966 HD domain GFC28_1158 PF00013 KH domain GFC28_1158 PF12072 Domain of unknown function (DUF3552) GFC28_1159 PF00154 recA bacterial DNA recombination protein GFC28_116 PF08810 Kinase associated protein B GFC28_1160 PF00154 recA bacterial DNA recombination protein GFC28_1161 PF00994 Probable molybdopterin binding domain GFC28_1161 PF02464 Competence-damaged protein GFC28_1161 PF18146 Damage-inducible protein CinA KH domain GFC28_1162 PF01066 CDP-alcohol phosphatidyltransferase GFC28_1163 PF13464 Domain of unknown function (DUF4115) GFC28_1164 PF11868 Protein of unknown function (DUF3388) GFC28_1165 PF11588 Protein of unknown function (DUF3243) GFC28_1167 PF00675 Insulinase (Peptidase family M16) GFC28_1167 PF05193 Peptidase M16 inactive domain GFC28_1168 PF05193 Peptidase M16 inactive domain GFC28_1173 PF07702 UTRA domain GFC28_1173 PF00392 Bacterial regulatory proteins, gntR family GFC28_1174 PF01580 FtsK/SpoIIIE family GFC28_1174 PF17854 FtsK alpha domain GFC28_1174 PF09397 Ftsk gamma domain GFC28_1175 PF14035 YlzJ-like protein GFC28_1176 PF00574 Clp protease GFC28_1177 PF00753 Metallo-beta-lactamase superfamily GFC28_1177 PF17770 Ribonuclease J C-terminal domain GFC28_1177 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GFC28_1178 PF00701 Dihydrodipicolinate synthetase family GFC28_1179 PF00696 Amino acid kinase family GFC28_1179 PF13840 ACT domain GFC28_1180 PF01118 Semialdehyde dehydrogenase, NAD binding domain GFC28_1180 PF02774 Semialdehyde dehydrogenase, dimerisation domain GFC28_1181 PF02441 Flavoprotein GFC28_1182 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GFC28_1182 PF16924 Dipicolinate synthase subunit A N-terminal domain GFC28_1183 PF05239 PRC-barrel domain GFC28_1184 PF05193 Peptidase M16 inactive domain GFC28_1184 PF00675 Insulinase (Peptidase family M16) GFC28_1185 PF01522 Polysaccharide deacetylase GFC28_1186 PF01138 3' exoribonuclease family, domain 1 GFC28_1186 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GFC28_1186 PF03725 3' exoribonuclease family, domain 2 GFC28_1186 PF00013 KH domain GFC28_1186 PF00575 S1 RNA binding domain GFC28_1187 PF00312 Ribosomal protein S15 GFC28_1188 PF06574 FAD synthetase GFC28_1188 PF01687 Riboflavin kinase GFC28_1189 PF01509 TruB family pseudouridylate synthase (N terminal domain) GFC28_1189 PF16198 tRNA pseudouridylate synthase B C-terminal domain GFC28_119 PF00440 Bacterial regulatory proteins, tetR family GFC28_1190 PF02033 Ribosome-binding factor A GFC28_1191 PF04456 Protein of unknown function (DUF503) GFC28_1192 PF04760 Translation initiation factor IF-2, N-terminal region GFC28_1192 PF00009 Elongation factor Tu GTP binding domain GFC28_1192 PF11987 Translation-initiation factor 2 GFC28_1193 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GFC28_1194 PF04296 Protein of unknown function (DUF448) GFC28_1195 PF13184 NusA-like KH domain GFC28_1195 PF08529 NusA N-terminal domain GFC28_1195 PF00575 S1 RNA binding domain GFC28_1196 PF17384 RimP C-terminal SH3 domain GFC28_1196 PF02576 RimP N-terminal domain GFC28_1197 PF02811 PHP domain GFC28_1197 PF14579 Helix-hairpin-helix motif GFC28_1197 PF00929 Exonuclease GFC28_1197 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GFC28_1197 PF07733 Bacterial DNA polymerase III alpha NTPase domain GFC28_1197 PF11490 DNA polymerase III polC-type N-terminus II GFC28_1197 PF14480 DNA polymerase III polC-type N-terminus I GFC28_1198 PF03129 Anticodon binding domain GFC28_1198 PF04073 Aminoacyl-tRNA editing domain GFC28_1198 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC28_1199 PF02163 Peptidase family M50 GFC28_1199 PF13180 PDZ domain GFC28_12 PF07687 Peptidase dimerisation domain GFC28_12 PF01546 Peptidase family M20/M25/M40 GFC28_120 PF00873 AcrB/AcrD/AcrF family GFC28_1200 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GFC28_1200 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GFC28_1200 PF13288 DXP reductoisomerase C-terminal domain GFC28_1202 PF01255 Putative undecaprenyl diphosphate synthase GFC28_1203 PF01765 Ribosome recycling factor GFC28_1204 PF00696 Amino acid kinase family GFC28_1205 PF00889 Elongation factor TS GFC28_1206 PF00318 Ribosomal protein S2 GFC28_1209 PF04545 Sigma-70, region 4 GFC28_1209 PF04539 Sigma-70 region 3 GFC28_1209 PF04542 Sigma-70 region 2 GFC28_121 PF13367 PrsW family intramembrane metalloprotease GFC28_1211 PF03975 CheD chemotactic sensory transduction GFC28_1212 PF04509 CheC-like family GFC28_1213 PF01584 CheW-like domain GFC28_1214 PF01627 Hpt domain GFC28_1214 PF02895 Signal transducing histidine kinase, homodimeric domain GFC28_1214 PF01584 CheW-like domain GFC28_1214 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1214 PF07194 P2 response regulator binding domain GFC28_1215 PF00072 Response regulator receiver domain GFC28_1215 PF01339 CheB methylesterase GFC28_1216 PF10609 NUBPL iron-transfer P-loop NTPase GFC28_1217 PF00448 SRP54-type protein, GTPase domain GFC28_1218 PF00771 FHIPEP family GFC28_1219 PF01312 FlhB HrpN YscU SpaS Family GFC28_122 PF07486 Cell Wall Hydrolase GFC28_122 PF01471 Putative peptidoglycan binding domain GFC28_1220 PF01311 Bacterial export proteins, family 1 GFC28_1221 PF01313 Bacterial export proteins, family 3 GFC28_1222 PF00813 FliP family GFC28_1223 PF04347 Flagellar biosynthesis protein, FliO GFC28_1224 PF00072 Response regulator receiver domain GFC28_1225 PF04509 CheC-like family GFC28_1225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GFC28_1226 PF02154 Flagellar motor switch protein FliM GFC28_1226 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GFC28_1227 PF03748 Flagellar basal body-associated protein FliL GFC28_1228 PF06289 Flagellar and Swarming motility proteins GFC28_1229 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC28_1229 PF00460 Flagella basal body rod protein GFC28_123 PF14620 YpeB sporulation GFC28_123 PF03413 Peptidase propeptide and YPEB domain GFC28_1230 PF03963 Flagellar hook capping protein - N-terminal region GFC28_1231 PF02120 Flagellar hook-length control protein FliK GFC28_1233 PF02050 Flagellar FliJ protein GFC28_1234 PF18269 T3SS EscN ATPase C-terminal domain GFC28_1234 PF02874 ATP synthase alpha/beta family, beta-barrel domain GFC28_1234 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC28_1235 PF02108 Flagellar assembly protein FliH GFC28_1236 PF01706 FliG C-terminal domain GFC28_1236 PF14841 FliG middle domain GFC28_1236 PF14842 FliG N-terminal domain GFC28_1237 PF08345 Flagellar M-ring protein C-terminal GFC28_1237 PF01514 Secretory protein of YscJ/FliF family GFC28_1238 PF02049 Flagellar hook-basal body complex protein FliE GFC28_1239 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC28_1239 PF00460 Flagella basal body rod protein GFC28_124 PF07238 PilZ domain GFC28_124 PF12945 Flagellar protein YcgR GFC28_1240 PF00460 Flagella basal body rod protein GFC28_1241 PF06018 CodY GAF-like domain GFC28_1241 PF08222 CodY helix-turn-helix domain GFC28_1242 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_1242 PF07724 AAA domain (Cdc48 subfamily) GFC28_1242 PF10431 C-terminal, D2-small domain, of ClpB protein GFC28_1243 PF00227 Proteasome subunit GFC28_1244 PF02899 Phage integrase, N-terminal SAM-like domain GFC28_1244 PF00589 Phage integrase family GFC28_1245 PF01134 Glucose inhibited division protein A GFC28_1246 PF01751 Toprim domain GFC28_1246 PF01396 Topoisomerase DNA binding C4 zinc finger GFC28_1246 PF01131 DNA topoisomerase GFC28_1247 PF02481 DNA recombination-mediator protein A GFC28_1248 PF00549 CoA-ligase GFC28_1248 PF02629 CoA binding domain GFC28_1249 PF08442 ATP-grasp domain GFC28_1249 PF00549 CoA-ligase GFC28_1250 PF01312 FlhB HrpN YscU SpaS Family GFC28_1252 PF01351 Ribonuclease HII GFC28_1253 PF01926 50S ribosome-binding GTPase GFC28_1254 PF10502 Signal peptidase, peptidase S26 GFC28_1255 PF01245 Ribosomal protein L19 GFC28_1256 PF01746 tRNA (Guanine-1)-methyltransferase GFC28_1257 PF05239 PRC-barrel domain GFC28_1257 PF01782 RimM N-terminal domain GFC28_1258 PF11068 YlqD protein GFC28_126 PF02224 Cytidylate kinase GFC28_1260 PF00886 Ribosomal protein S16 GFC28_1261 PF02881 SRP54-type protein, helical bundle domain GFC28_1261 PF00448 SRP54-type protein, GTPase domain GFC28_1261 PF02978 Signal peptide binding domain GFC28_1262 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GFC28_1263 PF02881 SRP54-type protein, helical bundle domain GFC28_1263 PF00448 SRP54-type protein, GTPase domain GFC28_1264 PF06470 SMC proteins Flexible Hinge Domain GFC28_1264 PF02463 RecF/RecN/SMC N terminal domain GFC28_1265 PF00035 Double-stranded RNA binding motif GFC28_1265 PF14622 Ribonuclease-III-like GFC28_1266 PF00550 Phosphopantetheine attachment site GFC28_1268 PF00698 Acyl transferase domain GFC28_1269 PF02504 Fatty acid synthesis protein GFC28_127 PF01553 Acyltransferase GFC28_1270 PF08279 HTH domain GFC28_1270 PF01575 MaoC like domain GFC28_1271 PF00271 Helicase conserved C-terminal domain GFC28_1271 PF00270 DEAD/DEAH box helicase GFC28_1271 PF17191 RecG wedge domain GFC28_1272 PF03313 Serine dehydratase alpha chain GFC28_1273 PF01842 ACT domain GFC28_1273 PF03315 Serine dehydratase beta chain GFC28_1274 PF13684 Dihydroxyacetone kinase family GFC28_1274 PF02734 DAK2 domain GFC28_1275 PF03780 Asp23 family, cell envelope-related function GFC28_1276 PF00830 Ribosomal L28 family GFC28_1277 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GFC28_1277 PF04263 Thiamin pyrophosphokinase, catalytic domain GFC28_1278 PF00834 Ribulose-phosphate 3 epimerase family GFC28_1279 PF03193 RsgA GTPase GFC28_1279 PF16745 RsgA N-terminal domain GFC28_128 PF00575 S1 RNA binding domain GFC28_1280 PF00069 Protein kinase domain GFC28_1280 PF03793 PASTA domain GFC28_1282 PF04055 Radical SAM superfamily GFC28_1283 PF01029 NusB family GFC28_1283 PF01189 16S rRNA methyltransferase RsmB/F GFC28_1284 PF02911 Formyl transferase, C-terminal domain GFC28_1284 PF00551 Formyl transferase GFC28_1285 PF01327 Polypeptide deformylase GFC28_1286 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GFC28_1286 PF00271 Helicase conserved C-terminal domain GFC28_1286 PF18074 Primosomal protein N C-terminal domain GFC28_1286 PF04851 Type III restriction enzyme, res subunit GFC28_1286 PF17764 3′ DNA-binding domain (3′BD) GFC28_1287 PF02441 Flavoprotein GFC28_1287 PF04127 DNA / pantothenate metabolism flavoprotein GFC28_1288 PF01192 RNA polymerase Rpb6 GFC28_1289 PF00625 Guanylate kinase GFC28_129 PF01070 FMN-dependent dehydrogenase GFC28_1290 PF04025 Domain of unknown function (DUF370) GFC28_1291 PF03755 YicC-like family, N-terminal region GFC28_1291 PF08340 Domain of unknown function (DUF1732) GFC28_1292 PF00689 Cation transporting ATPase, C-terminus GFC28_1292 PF00690 Cation transporter/ATPase, N-terminus GFC28_1295 PF00156 Phosphoribosyl transferase domain GFC28_1296 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GFC28_1297 PF01180 Dihydroorotate dehydrogenase GFC28_1298 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GFC28_1298 PF00175 Oxidoreductase NAD-binding domain GFC28_1299 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC28_1299 PF02142 MGS-like domain GFC28_1299 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GFC28_13 PF01584 CheW-like domain GFC28_130 PF14140 YpzI-like protein GFC28_1300 PF00117 Glutamine amidotransferase class-I GFC28_1300 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GFC28_1301 PF01979 Amidohydrolase family GFC28_1302 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GFC28_1302 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GFC28_1303 PF00860 Permease family GFC28_1304 PF00156 Phosphoribosyl transferase domain GFC28_1305 PF01479 S4 domain GFC28_1305 PF00849 RNA pseudouridylate synthase GFC28_1306 PF01252 Signal peptidase (SPase) II GFC28_1307 PF06827 Zinc finger found in FPG and IleRS GFC28_1307 PF00133 tRNA synthetases class I (I, L, M and V) GFC28_1307 PF08264 Anticodon-binding domain of tRNA GFC28_1308 PF05103 DivIVA protein GFC28_1309 PF01479 S4 domain GFC28_1309 PF17774 Putative RNA-binding domain in YlmH GFC28_1310 PF02325 YGGT family GFC28_1311 PF04472 Cell division protein SepF GFC28_1312 PF01168 Alanine racemase, N-terminal domain GFC28_1314 PF05239 PRC-barrel domain GFC28_1315 PF04539 Sigma-70 region 3 GFC28_1315 PF04542 Sigma-70 region 2 GFC28_1315 PF04545 Sigma-70, region 4 GFC28_1316 PF04545 Sigma-70, region 4 GFC28_1316 PF04542 Sigma-70 region 2 GFC28_1317 PF03419 Sporulation factor SpoIIGA GFC28_1318 PF12327 FtsZ family, C-terminal domain GFC28_1318 PF00091 Tubulin/FtsZ family, GTPase domain GFC28_1319 PF02491 SHS2 domain inserted in FTSA GFC28_1320 PF06947 Protein of unknown function (DUF1290) GFC28_1321 PF05949 Bacterial protein of unknown function (DUF881) GFC28_1322 PF05949 Bacterial protein of unknown function (DUF881) GFC28_1323 PF08478 POTRA domain, FtsQ-type GFC28_1324 PF01565 FAD binding domain GFC28_1324 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GFC28_1325 PF01098 Cell cycle protein GFC28_1326 PF08245 Mur ligase middle domain GFC28_1326 PF02875 Mur ligase family, glutamate ligase domain GFC28_1327 PF00953 Glycosyl transferase family 4 GFC28_1329 PF01225 Mur ligase family, catalytic domain GFC28_1329 PF02875 Mur ligase family, glutamate ligase domain GFC28_1329 PF08245 Mur ligase middle domain GFC28_133 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GFC28_133 PF01926 50S ribosome-binding GTPase GFC28_1330 PF03793 PASTA domain GFC28_1330 PF00905 Penicillin binding protein transpeptidase domain GFC28_1330 PF03717 Penicillin-binding Protein dimerisation domain GFC28_1332 PF04977 Septum formation initiator GFC28_1333 PF01795 MraW methylase family GFC28_1334 PF10079 Bacillithiol biosynthesis BshC GFC28_1336 PF02558 Ketopantoate reductase PanE/ApbA GFC28_1336 PF08546 Ketopantoate reductase PanE/ApbA C terminal GFC28_1338 PF00378 Enoyl-CoA hydratase/isomerase GFC28_1339 PF01783 Ribosomal L32p protein family GFC28_134 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GFC28_134 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFC28_1340 PF02620 Large ribosomal RNA subunit accumulation protein YceD GFC28_1341 PF13180 PDZ domain GFC28_1341 PF05362 Lon protease (S16) C-terminal proteolytic domain GFC28_1342 PF05636 HIGH Nucleotidyl Transferase GFC28_1343 PF01734 Patatin-like phospholipase GFC28_1344 PF01467 Cytidylyltransferase-like GFC28_1348 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GFC28_1349 PF06133 Control of competence regulator ComK, YlbF/YmcA GFC28_1351 PF14003 YlbE-like protein GFC28_1352 PF14071 Putative coat protein GFC28_1353 PF14504 CAP-associated N-terminal GFC28_1353 PF00188 Cysteine-rich secretory protein family GFC28_1354 PF00571 CBS domain GFC28_1355 PF00188 Cysteine-rich secretory protein family GFC28_1356 PF08868 YugN-like family GFC28_1359 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GFC28_1360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GFC28_1361 PF00510 Cytochrome c oxidase subunit III GFC28_1362 PF00115 Cytochrome C and Quinol oxidase polypeptide I GFC28_1363 PF00034 Cytochrome c GFC28_1363 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GFC28_1363 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GFC28_1364 PF01040 UbiA prenyltransferase family GFC28_1365 PF02628 Cytochrome oxidase assembly protein GFC28_1366 PF02785 Biotin carboxylase C-terminal domain GFC28_1366 PF00364 Biotin-requiring enzyme GFC28_1366 PF02436 Conserved carboxylase domain GFC28_1366 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC28_1366 PF00289 Biotin carboxylase, N-terminal domain GFC28_1366 PF00682 HMGL-like GFC28_1367 PF01098 Cell cycle protein GFC28_1368 PF07408 Protein of unknown function (DUF1507) GFC28_137 PF09547 Stage IV sporulation protein A (spore_IV_A) GFC28_1370 PF02562 PhoH-like protein GFC28_1370 PF13638 PIN domain GFC28_1371 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GFC28_1373 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GFC28_1375 PF14036 YlaH-like protein GFC28_1378 PF00459 Inositol monophosphatase family GFC28_138 PF00216 Bacterial DNA-binding protein GFC28_1380 PF05256 Uncharacterised protein family (UPF0223) GFC28_1381 PF03060 Nitronate monooxygenase GFC28_1382 PF01276 Orn/Lys/Arg decarboxylase, major domain GFC28_1382 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GFC28_1387 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_1387 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC28_1388 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC28_1388 PF02817 e3 binding domain GFC28_1388 PF00364 Biotin-requiring enzyme GFC28_1389 PF02780 Transketolase, C-terminal domain GFC28_1389 PF02779 Transketolase, pyrimidine binding domain GFC28_139 PF01227 GTP cyclohydrolase I GFC28_1390 PF00676 Dehydrogenase E1 component GFC28_1392 PF01327 Polypeptide deformylase GFC28_1396 PF17770 Ribonuclease J C-terminal domain GFC28_1396 PF00753 Metallo-beta-lactamase superfamily GFC28_1396 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GFC28_1397 PF02254 TrkA-N domain GFC28_1397 PF02080 TrkA-C domain GFC28_1398 PF00578 AhpC/TSA family GFC28_1399 PF00578 AhpC/TSA family GFC28_14 PF00893 Small Multidrug Resistance protein GFC28_140 PF02081 Tryptophan RNA-binding attenuator protein GFC28_1400 PF00578 AhpC/TSA family GFC28_1400 PF10417 C-terminal domain of 1-Cys peroxiredoxin GFC28_1401 PF03698 Uncharacterised protein family (UPF0180) GFC28_1402 PF01546 Peptidase family M20/M25/M40 GFC28_1402 PF07687 Peptidase dimerisation domain GFC28_1403 PF00132 Bacterial transferase hexapeptide (six repeats) GFC28_1403 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GFC28_1403 PF14602 Hexapeptide repeat of succinyl-transferase GFC28_1404 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_1404 PF03466 LysR substrate binding domain GFC28_1405 PF01925 Sulfite exporter TauE/SafE GFC28_1407 PF14156 Antirepressor AbbA GFC28_1409 PF08796 Protein of unknown function (DUF1797) GFC28_141 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GFC28_1411 PF10388 EAL-domain associated signalling protein domain GFC28_1411 PF00563 EAL domain GFC28_1412 PF13529 Peptidase_C39 like family GFC28_1414 PF10518 TAT (twin-arginine translocation) pathway signal sequence GFC28_1414 PF00149 Calcineurin-like phosphoesterase GFC28_1415 PF02503 Polyphosphate kinase middle domain GFC28_1415 PF13090 Polyphosphate kinase C-terminal domain 2 GFC28_1415 PF17941 Polyphosphate kinase C-terminal domain 1 GFC28_1415 PF13089 Polyphosphate kinase N-terminal domain GFC28_1416 PF02541 Ppx/GppA phosphatase family GFC28_1417 PF14177 YkyB-like protein GFC28_1418 PF01584 CheW-like domain GFC28_1418 PF00072 Response regulator receiver domain GFC28_142 PF01209 ubiE/COQ5 methyltransferase family GFC28_1420 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1423 PF01544 CorA-like Mg2+ transporter protein GFC28_1425 PF00155 Aminotransferase class I and II GFC28_1426 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GFC28_1426 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GFC28_1427 PF05154 TM2 domain GFC28_1428 PF00106 short chain dehydrogenase GFC28_1429 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1429 PF02743 Cache domain GFC28_1429 PF00672 HAMP domain GFC28_143 PF00348 Polyprenyl synthetase GFC28_1430 PF02896 PEP-utilising enzyme, TIM barrel domain GFC28_1430 PF00391 PEP-utilising enzyme, mobile domain GFC28_1430 PF05524 PEP-utilising enzyme, N-terminal GFC28_1431 PF00381 PTS HPr component phosphorylation site GFC28_1432 PF02378 Phosphotransferase system, EIIC GFC28_1432 PF00367 phosphotransferase system, EIIB GFC28_1432 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GFC28_1433 PF00874 PRD domain GFC28_1433 PF03123 CAT RNA binding domain GFC28_1435 PF00561 alpha/beta hydrolase fold GFC28_1435 PF08386 TAP-like protein GFC28_1436 PF00999 Sodium/hydrogen exchanger family GFC28_1438 PF00990 Diguanylate cyclase, GGDEF domain GFC28_1438 PF08448 PAS fold GFC28_1438 PF00563 EAL domain GFC28_1438 PF08447 PAS fold GFC28_144 PF00334 Nucleoside diphosphate kinase GFC28_1442 PF00881 Nitroreductase family GFC28_1443 PF00989 PAS fold GFC28_1443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1443 PF08447 PAS fold GFC28_1443 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1444 PF14166 YueH-like protein GFC28_1448 PF00196 Bacterial regulatory proteins, luxR family GFC28_1448 PF04542 Sigma-70 region 2 GFC28_145 PF03705 CheR methyltransferase, all-alpha domain GFC28_145 PF01739 CheR methyltransferase, SAM binding domain GFC28_1450 PF07486 Cell Wall Hydrolase GFC28_1451 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GFC28_1452 PF13460 NAD(P)H-binding GFC28_1453 PF14489 QueF-like protein GFC28_1454 PF14489 QueF-like protein GFC28_1455 PF04055 Radical SAM superfamily GFC28_1456 PF01242 6-pyruvoyl tetrahydropterin synthase GFC28_1457 PF06508 Queuosine biosynthesis protein QueC GFC28_1458 PF03845 Spore germination protein GFC28_146 PF01264 Chorismate synthase GFC28_1460 PF03323 Bacillus/Clostridium GerA spore germination protein GFC28_1461 PF12729 Four helix bundle sensory module for signal transduction GFC28_1461 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1461 PF00672 HAMP domain GFC28_1463 PF13115 YtkA-like GFC28_1464 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_1464 PF10431 C-terminal, D2-small domain, of ClpB protein GFC28_1464 PF07724 AAA domain (Cdc48 subfamily) GFC28_1464 PF17871 AAA lid domain GFC28_1467 PF00005 ABC transporter GFC28_1468 PF12399 Branched-chain amino acid ATP-binding cassette transporter GFC28_1468 PF00005 ABC transporter GFC28_147 PF01761 3-dehydroquinate synthase GFC28_1470 PF02653 Branched-chain amino acid transport system / permease component GFC28_1471 PF00440 Bacterial regulatory proteins, tetR family GFC28_1473 PF00005 ABC transporter GFC28_1475 PF13520 Amino acid permease GFC28_1476 PF01047 MarR family GFC28_1477 PF03079 ARD/ARD' family GFC28_1478 PF00596 Class II Aldolase and Adducin N-terminal domain GFC28_148 PF07736 Chorismate mutase type I GFC28_1480 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GFC28_1480 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GFC28_1481 PF00155 Aminotransferase class I and II GFC28_1482 PF00795 Carbon-nitrogen hydrolase GFC28_1483 PF01636 Phosphotransferase enzyme family GFC28_1484 PF01008 Initiation factor 2 subunit family GFC28_1485 PF13407 Periplasmic binding protein domain GFC28_1486 PF00005 ABC transporter GFC28_1487 PF02653 Branched-chain amino acid transport system / permease component GFC28_1489 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GFC28_1489 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GFC28_149 PF00425 chorismate binding enzyme GFC28_149 PF04715 Anthranilate synthase component I, N terminal region GFC28_1490 PF00989 PAS fold GFC28_1490 PF13426 PAS domain GFC28_1490 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1490 PF13188 PAS domain GFC28_1490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1495 PF13823 Alcohol dehydrogenase GroES-associated GFC28_1495 PF08240 Alcohol dehydrogenase GroES-like domain GFC28_1495 PF00107 Zinc-binding dehydrogenase GFC28_1496 PF07690 Major Facilitator Superfamily GFC28_1498 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1499 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_150 PF02885 Glycosyl transferase family, helical bundle domain GFC28_150 PF00591 Glycosyl transferase family, a/b domain GFC28_1500 PF13416 Bacterial extracellular solute-binding protein GFC28_1502 PF00356 Bacterial regulatory proteins, lacI family GFC28_1503 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC28_1504 PF00210 Ferritin-like domain GFC28_1505 PF13520 Amino acid permease GFC28_1506 PF04341 Protein of unknown function, DUF485 GFC28_1507 PF00474 Sodium:solute symporter family GFC28_1509 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GFC28_1509 PF13378 Enolase C-terminal domain-like GFC28_151 PF00218 Indole-3-glycerol phosphate synthase GFC28_1511 PF07687 Peptidase dimerisation domain GFC28_1511 PF01546 Peptidase family M20/M25/M40 GFC28_1513 PF06738 Putative threonine/serine exporter GFC28_1514 PF02080 TrkA-C domain GFC28_1515 PF00999 Sodium/hydrogen exchanger family GFC28_1516 PF09339 IclR helix-turn-helix domain GFC28_1516 PF01614 Bacterial transcriptional regulator GFC28_1517 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC28_1518 PF01274 Malate synthase GFC28_1519 PF01565 FAD binding domain GFC28_1519 PF02913 FAD linked oxidases, C-terminal domain GFC28_152 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GFC28_1520 PF13183 4Fe-4S dicluster domain GFC28_1520 PF02754 Cysteine-rich domain GFC28_1521 PF02913 FAD linked oxidases, C-terminal domain GFC28_1521 PF01565 FAD binding domain GFC28_1522 PF00781 Diacylglycerol kinase catalytic domain GFC28_153 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_154 PF00290 Tryptophan synthase alpha chain GFC28_1541 PF05593 RHS Repeat GFC28_1542 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1542 PF12729 Four helix bundle sensory module for signal transduction GFC28_1542 PF00672 HAMP domain GFC28_1543 PF00072 Response regulator receiver domain GFC28_1543 PF01966 HD domain GFC28_1546 PF09922 Cell wall-active antibiotics response 4TMS YvqF GFC28_1547 PF07730 Histidine kinase GFC28_1547 PF00672 HAMP domain GFC28_1547 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1548 PF00196 Bacterial regulatory proteins, luxR family GFC28_1548 PF00072 Response regulator receiver domain GFC28_1549 PF13472 GDSL-like Lipase/Acylhydrolase family GFC28_155 PF00155 Aminotransferase class I and II GFC28_1550 PF00248 Aldo/keto reductase family GFC28_1551 PF07690 Major Facilitator Superfamily GFC28_1552 PF01638 HxlR-like helix-turn-helix GFC28_1553 PF00390 Malic enzyme, N-terminal domain GFC28_1553 PF03949 Malic enzyme, NAD binding domain GFC28_1554 PF00206 Lyase GFC28_1554 PF10415 Fumarase C C-terminus GFC28_1555 PF17763 Glutaminase/Asparaginase C-terminal domain GFC28_1555 PF00710 Asparaginase, N-terminal GFC28_1556 PF01381 Helix-turn-helix GFC28_1557 PF03816 Cell envelope-related transcriptional attenuator domain GFC28_1559 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFC28_156 PF02153 Prephenate dehydrogenase GFC28_156 PF01842 ACT domain GFC28_1560 PF00795 Carbon-nitrogen hydrolase GFC28_1561 PF00155 Aminotransferase class I and II GFC28_1561 PF00392 Bacterial regulatory proteins, gntR family GFC28_1563 PF10787 Uncharacterised protein from bacillus cereus group GFC28_1564 PF06039 Malate:quinone oxidoreductase (Mqo) GFC28_1565 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase GFC28_1566 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC28_1567 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC28_1568 PF00474 Sodium:solute symporter family GFC28_1569 PF04341 Protein of unknown function, DUF485 GFC28_157 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GFC28_1571 PF06574 FAD synthetase GFC28_1571 PF01687 Riboflavin kinase GFC28_1572 PF01613 Flavin reductase like domain GFC28_1573 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFC28_1574 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GFC28_1574 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GFC28_1575 PF00171 Aldehyde dehydrogenase family GFC28_1576 PF00701 Dihydrodipicolinate synthetase family GFC28_1577 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_1577 PF03466 LysR substrate binding domain GFC28_1579 PF00293 NUDIX domain GFC28_1581 PF04960 Glutaminase GFC28_1586 PF00465 Iron-containing alcohol dehydrogenase GFC28_1588 PF01032 FecCD transport family GFC28_1589 PF01032 FecCD transport family GFC28_1590 PF00005 ABC transporter GFC28_1591 PF05675 Protein of unknown function (DUF817) GFC28_1592 PF13443 Cro/C1-type HTH DNA-binding domain GFC28_1593 PF11188 Protein of unknown function (DUF2975) GFC28_160 PF08864 UPF0302 domain GFC28_160 PF08858 IDEAL domain GFC28_1603 PF10415 Fumarase C C-terminus GFC28_1603 PF00206 Lyase GFC28_1604 PF01738 Dienelactone hydrolase family GFC28_1607 PF03611 PTS system sugar-specific permease component GFC28_1608 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_161 PF10673 Protein of unknown function (DUF2487) GFC28_1610 PF04198 Putative sugar-binding domain GFC28_1611 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC28_1611 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_1612 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC28_1612 PF00364 Biotin-requiring enzyme GFC28_1612 PF02817 e3 binding domain GFC28_1613 PF02780 Transketolase, C-terminal domain GFC28_1613 PF02779 Transketolase, pyrimidine binding domain GFC28_1613 PF00364 Biotin-requiring enzyme GFC28_1614 PF00676 Dehydrogenase E1 component GFC28_1615 PF04198 Putative sugar-binding domain GFC28_1616 PF03829 PTS system glucitol/sorbitol-specific IIA component GFC28_1617 PF03612 Sorbitol phosphotransferase enzyme II N-terminus GFC28_1617 PF07663 Sorbitol phosphotransferase enzyme II C-terminus GFC28_1618 PF03608 PTS system enzyme II sorbitol-specific factor GFC28_162 PF00355 Rieske [2Fe-2S] domain GFC28_1625 PF13580 SIS domain GFC28_163 PF00033 Cytochrome b/b6/petB GFC28_1630 PF02126 Phosphotriesterase family GFC28_1631 PF03611 PTS system sugar-specific permease component GFC28_1632 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_1633 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC28_1634 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC28_1639 PF00248 Aldo/keto reductase family GFC28_164 PF00032 Cytochrome b(C-terminal)/b6/petD GFC28_164 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GFC28_1640 PF08463 EcoEI R protein C-terminal GFC28_1640 PF00271 Helicase conserved C-terminal domain GFC28_1640 PF04851 Type III restriction enzyme, res subunit GFC28_1640 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GFC28_1641 PF00293 NUDIX domain GFC28_1648 PF00069 Protein kinase domain GFC28_1648 PF03793 PASTA domain GFC28_165 PF07187 Protein of unknown function (DUF1405) GFC28_1652 PF00733 Asparagine synthase GFC28_1652 PF13537 Glutamine amidotransferase domain GFC28_1653 PF13529 Peptidase_C39 like family GFC28_1654 PF07732 Multicopper oxidase GFC28_1654 PF00394 Multicopper oxidase GFC28_1654 PF07731 Multicopper oxidase GFC28_1655 PF00665 Integrase core domain GFC28_1655 PF02796 Helix-turn-helix domain of resolvase GFC28_1656 PF01695 IstB-like ATP binding protein GFC28_1658 PF02683 Cytochrome C biogenesis protein transmembrane region GFC28_1659 PF00578 AhpC/TSA family GFC28_166 PF09577 Sporulation protein YpjB (SpoYpjB) GFC28_1660 PF01578 Cytochrome C assembly protein GFC28_1661 PF05140 ResB-like family GFC28_1667 PF00672 HAMP domain GFC28_1667 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1667 PF00989 PAS fold GFC28_1667 PF18698 Histidine kinase sensor domain GFC28_1667 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1668 PF00486 Transcriptional regulatory protein, C terminal GFC28_1668 PF00072 Response regulator receiver domain GFC28_167 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC28_167 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC28_1670 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GFC28_1671 PF00403 Heavy-metal-associated domain GFC28_1672 PF00403 Heavy-metal-associated domain GFC28_1673 PF02583 Metal-sensitive transcriptional repressor GFC28_1675 PF00403 Heavy-metal-associated domain GFC28_1675 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC28_1675 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_1676 PF13411 MerR HTH family regulatory protein GFC28_1678 PF02374 Anion-transporting ATPase GFC28_168 PF03819 MazG nucleotide pyrophosphohydrolase domain GFC28_1682 PF01566 Natural resistance-associated macrophage protein GFC28_1683 PF01545 Cation efflux family GFC28_1683 PF16916 Dimerisation domain of Zinc Transporter GFC28_1688 PF01209 ubiE/COQ5 methyltransferase family GFC28_1689 PF01790 Prolipoprotein diacylglyceryl transferase GFC28_169 PF01113 Dihydrodipicolinate reductase, N-terminus GFC28_169 PF05173 Dihydrodipicolinate reductase, C-terminus GFC28_1692 PF00578 AhpC/TSA family GFC28_1694 PF13276 HTH-like domain GFC28_1694 PF00665 Integrase core domain GFC28_1694 PF13333 Integrase core domain GFC28_1695 PF07454 Stage II sporulation protein P (SpoIIP) GFC28_17 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GFC28_17 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GFC28_170 PF02142 MGS-like domain GFC28_1701 PF01476 LysM domain GFC28_1701 PF00877 NlpC/P60 family GFC28_1703 PF00072 Response regulator receiver domain GFC28_1703 PF00486 Transcriptional regulatory protein, C terminal GFC28_1704 PF00672 HAMP domain GFC28_1704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1704 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1704 PF13426 PAS domain GFC28_1705 PF13520 Amino acid permease GFC28_171 PF02585 GlcNAc-PI de-N-acetylase GFC28_1714 PF00005 ABC transporter GFC28_1715 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_172 PF00534 Glycosyl transferases group 1 GFC28_172 PF13439 Glycosyltransferase Family 4 GFC28_173 PF12627 Probable RNA and SrmB- binding site of polymerase A GFC28_173 PF01743 Poly A polymerase head domain GFC28_173 PF13735 tRNA nucleotidyltransferase domain 2 putative GFC28_1733 PF00589 Phage integrase family GFC28_1733 PF02899 Phage integrase, N-terminal SAM-like domain GFC28_1738 PF14659 Phage integrase, N-terminal SAM-like domain GFC28_1738 PF00589 Phage integrase family GFC28_174 PF02237 Biotin protein ligase C terminal domain GFC28_174 PF08279 HTH domain GFC28_174 PF03099 Biotin/lipoate A/B protein ligase family GFC28_1740 PF01966 HD domain GFC28_1742 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_1742 PF03466 LysR substrate binding domain GFC28_1743 PF03601 Conserved hypothetical protein 698 GFC28_1745 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC28_1746 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC28_175 PF02548 Ketopantoate hydroxymethyltransferase GFC28_1750 PF13426 PAS domain GFC28_1750 PF00158 Sigma-54 interaction domain GFC28_1750 PF02954 Bacterial regulatory protein, Fis family GFC28_1751 PF00756 Putative esterase GFC28_1753 PF13673 Acetyltransferase (GNAT) domain GFC28_1756 PF13361 UvrD-like helicase C-terminal domain GFC28_1756 PF00580 UvrD/REP helicase N-terminal domain GFC28_1757 PF14069 Stage VI sporulation protein F GFC28_176 PF02569 Pantoate-beta-alanine ligase GFC28_1760 PF00085 Thioredoxin GFC28_1762 PF04239 Protein of unknown function (DUF421) GFC28_1764 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GFC28_1765 PF07451 Stage V sporulation protein AD (SpoVAD) GFC28_1766 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GFC28_177 PF02261 Aspartate decarboxylase GFC28_1775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFC28_1775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFC28_1775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GFC28_1776 PF01370 NAD dependent epimerase/dehydratase family GFC28_1777 PF13439 Glycosyltransferase Family 4 GFC28_1777 PF00534 Glycosyl transferases group 1 GFC28_1778 PF13439 Glycosyltransferase Family 4 GFC28_1778 PF00534 Glycosyl transferases group 1 GFC28_1779 PF01636 Phosphotransferase enzyme family GFC28_178 PF00929 Exonuclease GFC28_178 PF13307 Helicase C-terminal domain GFC28_178 PF04851 Type III restriction enzyme, res subunit GFC28_1782 PF01098 Cell cycle protein GFC28_1783 PF00149 Calcineurin-like phosphoesterase GFC28_1784 PF00849 RNA pseudouridylate synthase GFC28_1785 PF01513 ATP-NAD kinase GFC28_1786 PF04607 Region found in RelA / SpoT proteins GFC28_1788 PF01928 CYTH domain GFC28_1789 PF01464 Transglycosylase SLT domain GFC28_179 PF14084 Protein of unknown function (DUF4264) GFC28_1790 PF01152 Bacterial-like globin GFC28_1793 PF01432 Peptidase family M3 GFC28_1793 PF08439 Oligopeptidase F GFC28_1795 PF13396 Phospholipase_D-nuclease N-terminal GFC28_1795 PF13091 PLD-like domain GFC28_1796 PF05389 Negative regulator of genetic competence (MecA) GFC28_1797 PF03741 Integral membrane protein TerC family GFC28_1798 PF03960 ArsC family GFC28_180 PF03413 Peptidase propeptide and YPEB domain GFC28_180 PF17881 Domain of unknown function (DUF5590) GFC28_1800 PF00005 ABC transporter GFC28_1800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC28_1801 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC28_1801 PF00005 ABC transporter GFC28_1802 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1802 PF12911 N-terminal TM domain of oligopeptide transport permease C GFC28_1803 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1804 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GFC28_1805 PF00579 tRNA synthetases class I (W and Y) GFC28_1806 PF12227 Protein of unknown function (DUF3603) GFC28_1808 PF10026 Predicted Zn-dependent protease (DUF2268) GFC28_1809 PF00109 Beta-ketoacyl synthase, N-terminal domain GFC28_1809 PF02801 Beta-ketoacyl synthase, C-terminal domain GFC28_181 PF00155 Aminotransferase class I and II GFC28_1810 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GFC28_1810 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GFC28_1815 PF10431 C-terminal, D2-small domain, of ClpB protein GFC28_1815 PF02861 Clp amino terminal domain, pathogenicity island component GFC28_1815 PF17871 AAA lid domain GFC28_1815 PF07724 AAA domain (Cdc48 subfamily) GFC28_1815 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_1816 PF14168 YjzC-like protein GFC28_1817 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GFC28_1817 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GFC28_1818 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GFC28_1818 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC28_1819 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GFC28_1819 PF00117 Glutamine amidotransferase class-I GFC28_182 PF00152 tRNA synthetases class II (D, K and N) GFC28_182 PF01336 OB-fold nucleic acid binding domain GFC28_1820 PF00202 Aminotransferase class-III GFC28_1821 PF00696 Amino acid kinase family GFC28_1822 PF01960 ArgJ family GFC28_1823 PF01118 Semialdehyde dehydrogenase, NAD binding domain GFC28_1823 PF02774 Semialdehyde dehydrogenase, dimerisation domain GFC28_1824 PF02597 ThiS family GFC28_1825 PF02391 MoaE protein GFC28_1826 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GFC28_1827 PF03453 MoeA N-terminal region (domain I and II) GFC28_1827 PF03454 MoeA C-terminal region (domain IV) GFC28_1827 PF00994 Probable molybdopterin binding domain GFC28_1828 PF04055 Radical SAM superfamily GFC28_1828 PF06463 Molybdenum Cofactor Synthesis C GFC28_1829 PF12804 MobA-like NTP transferase domain GFC28_183 PF07261 Replication initiation and membrane attachment GFC28_1830 PF00326 Prolyl oligopeptidase family GFC28_1833 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC28_1833 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC28_1834 PF02645 Uncharacterised protein, DegV family COG1307 GFC28_1836 PF00196 Bacterial regulatory proteins, luxR family GFC28_1836 PF00072 Response regulator receiver domain GFC28_1837 PF07730 Histidine kinase GFC28_1838 PF00005 ABC transporter GFC28_184 PF10576 Iron-sulfur binding domain of endonuclease III GFC28_184 PF00730 HhH-GPD superfamily base excision DNA repair protein GFC28_184 PF00633 Helix-hairpin-helix motif GFC28_1841 PF02743 Cache domain GFC28_1841 PF00672 HAMP domain GFC28_1841 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_1843 PF17783 CvfB-like winged helix domain GFC28_1843 PF13509 S1 domain GFC28_1844 PF04461 Protein of unknown function (DUF520) GFC28_1845 PF02574 Homocysteine S-methyltransferase GFC28_1845 PF02219 Methylenetetrahydrofolate reductase GFC28_1846 PF02310 B12 binding domain GFC28_1846 PF02607 B12 binding domain GFC28_1846 PF02965 Vitamin B12 dependent methionine synthase, activation domain GFC28_1846 PF00809 Pterin binding enzyme GFC28_1846 PF02574 Homocysteine S-methyltransferase GFC28_1848 PF00356 Bacterial regulatory proteins, lacI family GFC28_1849 PF16338 Domain of unknown function (DUF4968) GFC28_1849 PF17137 Domain of unknown function (DUF5110) GFC28_1849 PF13802 Galactose mutarotase-like GFC28_1849 PF01055 Glycosyl hydrolases family 31 GFC28_1850 PF00128 Alpha amylase, catalytic domain GFC28_1850 PF02903 Alpha amylase, N-terminal ig-like domain GFC28_1851 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1852 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1853 PF13416 Bacterial extracellular solute-binding protein GFC28_1854 PF00128 Alpha amylase, catalytic domain GFC28_1854 PF16657 Maltogenic Amylase, C-terminal domain GFC28_1854 PF02903 Alpha amylase, N-terminal ig-like domain GFC28_1855 PF02311 AraC-like ligand binding domain GFC28_1855 PF12833 Helix-turn-helix domain GFC28_1856 PF01554 MatE GFC28_1857 PF00733 Asparagine synthase GFC28_1857 PF13537 Glutamine amidotransferase domain GFC28_1859 PF07457 Protein of unknown function (DUF1516) GFC28_186 PF00912 Transglycosylase GFC28_186 PF00905 Penicillin binding protein transpeptidase domain GFC28_1860 PF00202 Aminotransferase class-III GFC28_1861 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC28_1862 PF04235 Protein of unknown function (DUF418) GFC28_1863 PF00501 AMP-binding enzyme GFC28_1863 PF13193 AMP-binding enzyme C-terminal domain GFC28_1866 PF10676 Spore germination protein gerPA/gerPF GFC28_1867 PF10803 Spore germination GerPB GFC28_1868 PF10737 Spore germination protein GerPC GFC28_187 PF03838 Recombination protein U GFC28_1872 PF13476 AAA domain GFC28_1873 PF12320 Type 5 capsule protein repressor C-terminal domain GFC28_1873 PF00149 Calcineurin-like phosphoesterase GFC28_1874 PF12705 PD-(D/E)XK nuclease superfamily GFC28_1874 PF13361 UvrD-like helicase C-terminal domain GFC28_1874 PF00580 UvrD/REP helicase N-terminal domain GFC28_1875 PF13361 UvrD-like helicase C-terminal domain GFC28_1875 PF12705 PD-(D/E)XK nuclease superfamily GFC28_1876 PF10502 Signal peptidase, peptidase S26 GFC28_1877 PF09335 SNARE associated Golgi protein GFC28_1878 PF06338 ComK protein GFC28_1881 PF00463 Isocitrate lyase family GFC28_1882 PF01435 Peptidase family M48 GFC28_1882 PF16491 CAAX prenyl protease N-terminal, five membrane helices GFC28_1885 PF03591 AzlC protein GFC28_1886 PF00501 AMP-binding enzyme GFC28_1886 PF13193 AMP-binding enzyme C-terminal domain GFC28_1887 PF12706 Beta-lactamase superfamily domain GFC28_1888 PF14149 YhfH-like protein GFC28_1889 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1890 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1891 PF01547 Bacterial extracellular solute-binding protein GFC28_1892 PF00356 Bacterial regulatory proteins, lacI family GFC28_1894 PF17932 Tetracyclin repressor-like, C-terminal domain GFC28_1894 PF00440 Bacterial regulatory proteins, tetR family GFC28_1897 PF01208 Uroporphyrinogen decarboxylase (URO-D) GFC28_1898 PF07687 Peptidase dimerisation domain GFC28_1898 PF01546 Peptidase family M20/M25/M40 GFC28_1900 PF03992 Antibiotic biosynthesis monooxygenase GFC28_1901 PF05975 Bacterial ABC transporter protein EcsB GFC28_1902 PF00005 ABC transporter GFC28_1903 PF01230 HIT domain GFC28_1904 PF05698 Bacterial trigger factor protein (TF) C-terminus GFC28_1906 PF01047 MarR family GFC28_1909 PF17099 Tryptophan transporter TrpP GFC28_191 PF14179 YppG-like protein GFC28_1910 PF00266 Aminotransferase class-V GFC28_1911 PF14147 Sporulation protein YhaL GFC28_1912 PF01966 HD domain GFC28_1912 PF01336 OB-fold nucleic acid binding domain GFC28_1914 PF00005 ABC transporter GFC28_1914 PF13732 Domain of unknown function (DUF4162) GFC28_1916 PF04055 Radical SAM superfamily GFC28_1918 PF06133 Control of competence regulator ComK, YlbF/YmcA GFC28_1919 PF04286 Protein of unknown function (DUF445) GFC28_192 PF17334 Minor curli fiber component A GFC28_1922 PF13556 PucR C-terminal helix-turn-helix domain GFC28_1923 PF03459 TOBE domain GFC28_1923 PF00005 ABC transporter GFC28_1923 PF17912 MalK OB fold domain GFC28_1925 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC28_1926 PF00005 ABC transporter GFC28_1927 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_1928 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC28_1929 PF03471 Transporter associated domain GFC28_1929 PF00571 CBS domain GFC28_1929 PF01595 Cyclin M transmembrane N-terminal domain GFC28_1931 PF00899 ThiF family GFC28_1932 PF05690 Thiazole biosynthesis protein ThiG GFC28_1933 PF02597 ThiS family GFC28_1934 PF01266 FAD dependent oxidoreductase GFC28_1935 PF02581 Thiamine monophosphate synthase GFC28_1936 PF02361 Cobalt transport protein GFC28_1937 PF00005 ABC transporter GFC28_1939 PF03070 TENA/THI-4/PQQC family GFC28_1940 PF10672 S-adenosylmethionine-dependent methyltransferase GFC28_1940 PF17785 PUA-like domain GFC28_1941 PF12867 DinB superfamily GFC28_1942 PF00128 Alpha amylase, catalytic domain GFC28_1942 PF16657 Maltogenic Amylase, C-terminal domain GFC28_1943 PF08546 Ketopantoate reductase PanE/ApbA C terminal GFC28_1943 PF02558 Ketopantoate reductase PanE/ApbA GFC28_1944 PF04328 Selenoprotein, putative GFC28_1945 PF02554 Carbon starvation protein CstA GFC28_1945 PF13722 5TM C-terminal transporter carbon starvation CstA GFC28_1947 PF02867 Ribonucleotide reductase, barrel domain GFC28_1947 PF00317 Ribonucleotide reductase, all-alpha domain GFC28_1947 PF03477 ATP cone domain GFC28_1948 PF00268 Ribonucleotide reductase, small chain GFC28_1949 PF03741 Integral membrane protein TerC family GFC28_195 PF00486 Transcriptional regulatory protein, C terminal GFC28_195 PF00072 Response regulator receiver domain GFC28_1951 PF00258 Flavodoxin GFC28_1952 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFC28_1953 PF01925 Sulfite exporter TauE/SafE GFC28_1954 PF00581 Rhodanese-like domain GFC28_1954 PF00753 Metallo-beta-lactamase superfamily GFC28_1955 PF00581 Rhodanese-like domain GFC28_1955 PF01206 Sulfurtransferase TusA GFC28_1958 PF13686 DsrE/DsrF/DrsH-like family GFC28_1959 PF01206 Sulfurtransferase TusA GFC28_196 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_196 PF18719 ArlS sensor domain GFC28_196 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1960 PF02583 Metal-sensitive transcriptional repressor GFC28_1963 PF04293 SpoVR like protein GFC28_1965 PF08141 Small acid-soluble spore protein H family GFC28_1967 PF09335 SNARE associated Golgi protein GFC28_1969 PF14148 YhdB-like protein GFC28_1971 PF03358 NADPH-dependent FMN reductase GFC28_1972 PF00072 Response regulator receiver domain GFC28_1972 PF00196 Bacterial regulatory proteins, luxR family GFC28_1973 PF07730 Histidine kinase GFC28_1973 PF13185 GAF domain GFC28_1974 PF00106 short chain dehydrogenase GFC28_1975 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GFC28_1975 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GFC28_1975 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GFC28_1975 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GFC28_1976 PF00571 CBS domain GFC28_1978 PF02600 Disulfide bond formation protein DsbB GFC28_198 PF04309 Glycerol-3-phosphate responsive antiterminator GFC28_1980 PF17326 Family of unknown function (DUF5365) GFC28_1981 PF00849 RNA pseudouridylate synthase GFC28_1981 PF01479 S4 domain GFC28_1982 PF01595 Cyclin M transmembrane N-terminal domain GFC28_1982 PF03471 Transporter associated domain GFC28_1982 PF00571 CBS domain GFC28_1983 PF04298 Putative neutral zinc metallopeptidase GFC28_1984 PF01385 Probable transposase GFC28_1984 PF12323 Helix-turn-helix domain GFC28_1984 PF07282 Putative transposase DNA-binding domain GFC28_1986 PF00248 Aldo/keto reductase family GFC28_1987 PF03358 NADPH-dependent FMN reductase GFC28_1988 PF17954 Quercetinase C-terminal cupin domain GFC28_1988 PF02678 Pirin GFC28_1989 PF00375 Sodium:dicarboxylate symporter family GFC28_199 PF16875 Glycosyl hydrolase family 36 N-terminal domain GFC28_199 PF16874 Glycosyl hydrolase family 36 C-terminal domain GFC28_1990 PF03480 Bacterial extracellular solute-binding protein, family 7 GFC28_1991 PF17203 Single cache domain 3 GFC28_1991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1991 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GFC28_1992 PF04703 FaeA-like protein GFC28_1992 PF00072 Response regulator receiver domain GFC28_1994 PF00672 HAMP domain GFC28_1994 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_1994 PF00512 His Kinase A (phospho-acceptor) domain GFC28_1995 PF12704 MacB-like periplasmic core domain GFC28_1995 PF00005 ABC transporter GFC28_1995 PF02687 FtsX-like permease family GFC28_1996 PF00005 ABC transporter GFC28_1998 PF10502 Signal peptidase, peptidase S26 GFC28_1999 PF04285 Protein of unknown function (DUF444) GFC28_2 PF06491 Disulphide isomerase GFC28_20 PF04199 Putative cyclase GFC28_200 PF12787 EcsC protein family GFC28_2000 PF08298 PrkA AAA domain GFC28_2000 PF06798 PrkA serine protein kinase C-terminal domain GFC28_2002 PF00588 SpoU rRNA Methylase family GFC28_2003 PF12671 Putative amidase domain GFC28_2004 PF08331 Domain of unknown function (DUF1730) GFC28_201 PF08544 GHMP kinases C terminal GFC28_201 PF10509 Galactokinase galactose-binding signature GFC28_201 PF00288 GHMP kinases N terminal domain GFC28_202 PF16363 GDP-mannose 4,6 dehydratase GFC28_203 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GFC28_203 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GFC28_2035 PF14540 Nucleotidyltransferase-like GFC28_2035 PF18576 Helix-turn-helix domain GFC28_2036 PF11023 Zinc-ribbon containing domain GFC28_2037 PF01475 Ferric uptake regulator family GFC28_2038 PF00578 AhpC/TSA family GFC28_2039 PF07885 Ion channel GFC28_2042 PF00005 ABC transporter GFC28_2043 PF00202 Aminotransferase class-III GFC28_2044 PF01493 GXGXG motif GFC28_2044 PF00310 Glutamine amidotransferases class-II GFC28_2044 PF04898 Glutamate synthase central domain GFC28_2044 PF01645 Conserved region in glutamate synthase GFC28_2048 PF06081 Aromatic acid exporter family member 1 GFC28_205 PF00011 Hsp20/alpha crystallin family GFC28_2052 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GFC28_2053 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC28_2053 PF00005 ABC transporter GFC28_2054 PF00005 ABC transporter GFC28_2054 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC28_2055 PF04167 Protein of unknown function (DUF402) GFC28_2056 PF14182 YgaB-like protein GFC28_206 PF00990 Diguanylate cyclase, GGDEF domain GFC28_206 PF05230 MASE2 domain GFC28_2060 PF14815 NUDIX domain GFC28_2060 PF00730 HhH-GPD superfamily base excision DNA repair protein GFC28_2060 PF00633 Helix-hairpin-helix motif GFC28_2061 PF04307 LexA-binding, inner membrane-associated putative hydrolase GFC28_2063 PF14043 WVELL protein GFC28_2064 PF08176 Small acid-soluble spore protein K family GFC28_2066 PF08838 Protein of unknown function (DUF1811) GFC28_2067 PF00106 short chain dehydrogenase GFC28_2068 PF02631 RecX family GFC28_2069 PF01370 NAD dependent epimerase/dehydratase family GFC28_2069 PF08338 Domain of unknown function (DUF1731) GFC28_207 PF00360 Phytochrome region GFC28_207 PF00990 Diguanylate cyclase, GGDEF domain GFC28_207 PF01590 GAF domain GFC28_207 PF00563 EAL domain GFC28_2070 PF01979 Amidohydrolase family GFC28_2075 PF00196 Bacterial regulatory proteins, luxR family GFC28_2075 PF00072 Response regulator receiver domain GFC28_2077 PF03061 Thioesterase superfamily GFC28_2078 PF01717 Cobalamin-independent synthase, Catalytic domain GFC28_2078 PF08267 Cobalamin-independent synthase, N-terminal domain GFC28_208 PF03707 Bacterial signalling protein N terminal repeat GFC28_208 PF00563 EAL domain GFC28_208 PF00990 Diguanylate cyclase, GGDEF domain GFC28_2080 PF00285 Citrate synthase, C-terminal domain GFC28_2081 PF03972 MmgE/PrpD family GFC28_2085 PF00209 Sodium:neurotransmitter symporter family GFC28_2094 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GFC28_2095 PF01385 Probable transposase GFC28_2095 PF12323 Helix-turn-helix domain GFC28_2095 PF07282 Putative transposase DNA-binding domain GFC28_21 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GFC28_21 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GFC28_2105 PF03412 Peptidase C39 family GFC28_2105 PF00664 ABC transporter transmembrane region GFC28_2105 PF00005 ABC transporter GFC28_2108 PF01938 TRAM domain GFC28_2108 PF05958 tRNA (Uracil-5-)-methyltransferase GFC28_2109 PF00730 HhH-GPD superfamily base excision DNA repair protein GFC28_2110 PF01522 Polysaccharide deacetylase GFC28_2111 PF05683 Fumarase C-terminus GFC28_2111 PF05681 Fumarate hydratase (Fumerase) GFC28_2113 PF08756 YfkB-like domain GFC28_2113 PF04055 Radical SAM superfamily GFC28_2115 PF14167 YfkD-like protein GFC28_2116 PF01699 Sodium/calcium exchanger protein GFC28_2118 PF07690 Major Facilitator Superfamily GFC28_2120 PF03631 Virulence factor BrkB GFC28_2122 PF01451 Low molecular weight phosphotyrosine protein phosphatase GFC28_2123 PF06569 Protein of unknown function (DUF1128) GFC28_2125 PF01507 Phosphoadenosine phosphosulfate reductase family GFC28_2126 PF01384 Phosphate transporter family GFC28_2127 PF01747 ATP-sulfurylase GFC28_2127 PF14306 PUA-like domain GFC28_2129 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GFC28_2129 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GFC28_2131 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_2132 PF01903 CbiX GFC28_2133 PF00708 Acylphosphatase GFC28_2135 PF08830 Protein of unknown function (DUF1806) GFC28_2136 PF02585 GlcNAc-PI de-N-acetylase GFC28_2137 PF14824 Sirohaem biosynthesis protein central GFC28_2139 PF09350 Domain of unknown function (DUF1992) GFC28_2140 PF00990 Diguanylate cyclase, GGDEF domain GFC28_2140 PF00563 EAL domain GFC28_2140 PF00498 FHA domain GFC28_2143 PF01476 LysM domain GFC28_2143 PF00877 NlpC/P60 family GFC28_2144 PF02754 Cysteine-rich domain GFC28_2144 PF13183 4Fe-4S dicluster domain GFC28_2145 PF02913 FAD linked oxidases, C-terminal domain GFC28_2145 PF01565 FAD binding domain GFC28_2146 PF02652 L-lactate permease GFC28_2147 PF07729 FCD domain GFC28_2147 PF00392 Bacterial regulatory proteins, gntR family GFC28_2148 PF02754 Cysteine-rich domain GFC28_2149 PF11870 Domain of unknown function (DUF3390) GFC28_2149 PF02589 LUD domain GFC28_2149 PF13183 4Fe-4S dicluster domain GFC28_2150 PF02589 LUD domain GFC28_2151 PF03741 Integral membrane protein TerC family GFC28_2152 PF07969 Amidohydrolase family GFC28_2153 PF17392 Urocanase C-terminal domain GFC28_2153 PF17391 Urocanase N-terminal domain GFC28_2153 PF01175 Urocanase Rossmann-like domain GFC28_2154 PF00221 Aromatic amino acid lyase GFC28_2155 PF09021 HutP GFC28_2156 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_2159 PF02625 XdhC and CoxI family GFC28_2159 PF13478 XdhC Rossmann domain GFC28_2160 PF12804 MobA-like NTP transferase domain GFC28_2161 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GFC28_2161 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GFC28_2163 PF01799 [2Fe-2S] binding domain GFC28_2163 PF00111 2Fe-2S iron-sulfur cluster binding domain GFC28_2164 PF01964 Radical SAM ThiC family GFC28_2164 PF13667 ThiC-associated domain GFC28_2165 PF17202 Single cache domain 3 GFC28_2165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_2165 PF00672 HAMP domain GFC28_2166 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GFC28_2166 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GFC28_2167 PF02898 Nitric oxide synthase, oxygenase domain GFC28_2168 PF00324 Amino acid permease GFC28_2169 PF13180 PDZ domain GFC28_2173 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GFC28_2173 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GFC28_2175 PF00005 ABC transporter GFC28_2175 PF02687 FtsX-like permease family GFC28_2175 PF12704 MacB-like periplasmic core domain GFC28_2179 PF00440 Bacterial regulatory proteins, tetR family GFC28_2179 PF17922 Tetracyclin repressor-like, C-terminal domain GFC28_2181 PF01435 Peptidase family M48 GFC28_2182 PF00005 ABC transporter GFC28_2188 PF01872 RibD C-terminal domain GFC28_2189 PF04203 Sortase domain GFC28_2190 PF06580 Histidine kinase GFC28_2190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2191 PF00072 Response regulator receiver domain GFC28_2191 PF04397 LytTr DNA-binding domain GFC28_2194 PF02475 Met-10+ like-protein GFC28_2194 PF01938 TRAM domain GFC28_2194 PF05958 tRNA (Uracil-5-)-methyltransferase GFC28_2195 PF00781 Diacylglycerol kinase catalytic domain GFC28_22 PF12706 Beta-lactamase superfamily domain GFC28_22 PF00753 Metallo-beta-lactamase superfamily GFC28_2200 PF01145 SPFH domain / Band 7 family GFC28_2200 PF15975 Flotillin GFC28_2202 PF00486 Transcriptional regulatory protein, C terminal GFC28_2202 PF00072 Response regulator receiver domain GFC28_2203 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2203 PF00672 HAMP domain GFC28_2203 PF13426 PAS domain GFC28_2203 PF00512 His Kinase A (phospho-acceptor) domain GFC28_2207 PF13416 Bacterial extracellular solute-binding protein GFC28_2208 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_2209 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_2210 PF08402 TOBE domain GFC28_2210 PF00005 ABC transporter GFC28_2217 PF09827 CRISPR associated protein Cas2 GFC28_2218 PF01867 CRISPR associated protein Cas1 GFC28_222 PF01593 Flavin containing amine oxidoreductase GFC28_2220 PF18019 HD domain GFC28_2220 PF18395 Cas3 C-terminal domain GFC28_2225 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_2226 PF00571 CBS domain GFC28_2226 PF00005 ABC transporter GFC28_2227 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GFC28_2228 PF02637 GatB domain GFC28_2228 PF02934 GatB/GatE catalytic domain GFC28_2229 PF01425 Amidase GFC28_223 PF00313 'Cold-shock' DNA-binding domain GFC28_2230 PF02686 Glu-tRNAGln amidotransferase C subunit GFC28_2231 PF01979 Amidohydrolase family GFC28_2231 PF13382 Adenine deaminase C-terminal domain GFC28_2232 PF00535 Glycosyl transferase family 2 GFC28_2237 PF00483 Nucleotidyl transferase GFC28_2238 PF01522 Polysaccharide deacetylase GFC28_2239 PF02817 e3 binding domain GFC28_2239 PF00364 Biotin-requiring enzyme GFC28_2239 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC28_2240 PF02779 Transketolase, pyrimidine binding domain GFC28_2240 PF02780 Transketolase, C-terminal domain GFC28_2241 PF00676 Dehydrogenase E1 component GFC28_2242 PF01590 GAF domain GFC28_2242 PF02954 Bacterial regulatory protein, Fis family GFC28_2242 PF00158 Sigma-54 interaction domain GFC28_2245 PF00005 ABC transporter GFC28_2248 PF00072 Response regulator receiver domain GFC28_2248 PF00196 Bacterial regulatory proteins, luxR family GFC28_225 PF02073 Thermophilic metalloprotease (M29) GFC28_2250 PF00171 Aldehyde dehydrogenase family GFC28_2251 PF07537 CamS sex pheromone cAM373 precursor GFC28_2252 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GFC28_2252 PF01653 NAD-dependent DNA ligase adenylation domain GFC28_2252 PF12826 Helix-hairpin-helix motif GFC28_2252 PF00533 BRCA1 C Terminus (BRCT) domain GFC28_2252 PF03120 NAD-dependent DNA ligase OB-fold domain GFC28_2253 PF13361 UvrD-like helicase C-terminal domain GFC28_2253 PF00580 UvrD/REP helicase N-terminal domain GFC28_2254 PF01884 PcrB family GFC28_2255 PF01371 Trp repressor protein GFC28_2256 PF11258 Protein of unknown function (DUF3048) N-terminal domain GFC28_2256 PF17479 Protein of unknown function (DUF3048) C-terminal domain GFC28_2257 PF01979 Amidohydrolase family GFC28_2257 PF13382 Adenine deaminase C-terminal domain GFC28_2258 PF02843 Phosphoribosylglycinamide synthetase, C domain GFC28_2258 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GFC28_2258 PF02844 Phosphoribosylglycinamide synthetase, N domain GFC28_226 PF01638 HxlR-like helix-turn-helix GFC28_2260 PF01808 AICARFT/IMPCHase bienzyme GFC28_2260 PF02142 MGS-like domain GFC28_2261 PF00551 Formyl transferase GFC28_2262 PF02769 AIR synthase related protein, C-terminal domain GFC28_2262 PF00586 AIR synthase related protein, N-terminal domain GFC28_2263 PF00156 Phosphoribosyl transferase domain GFC28_2264 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GFC28_2264 PF02769 AIR synthase related protein, C-terminal domain GFC28_2264 PF00586 AIR synthase related protein, N-terminal domain GFC28_2266 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GFC28_2267 PF01259 SAICAR synthetase GFC28_2268 PF00206 Lyase GFC28_2268 PF10397 Adenylosuccinate lyase C-terminus GFC28_2269 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GFC28_2269 PF02222 ATP-grasp domain GFC28_227 PF01022 Bacterial regulatory protein, arsR family GFC28_2270 PF00731 AIR carboxylase GFC28_2278 PF13302 Acetyltransferase (GNAT) domain GFC28_2279 PF00860 Permease family GFC28_228 PF13630 SdpI/YhfL protein family GFC28_228 PF07853 Protein of unknown function (DUF1648) GFC28_2280 PF02540 NAD synthase GFC28_2280 PF00117 Glutamine amidotransferase class-I GFC28_2280 PF00958 GMP synthase C terminal domain GFC28_2281 PF11992 Domain of unknown function (DUF3488) GFC28_2281 PF13559 Domain of unknown function (DUF4129) GFC28_2281 PF01841 Transglutaminase-like superfamily GFC28_2282 PF01882 Protein of unknown function DUF58 GFC28_2283 PF07726 ATPase family associated with various cellular activities (AAA) GFC28_2283 PF17863 AAA lid domain GFC28_2287 PF00082 Subtilase family GFC28_2289 PF01527 Transposase GFC28_229 PF10086 YhfC intramembrane metalloprotease GFC28_2290 PF13276 HTH-like domain GFC28_2290 PF00665 Integrase core domain GFC28_2290 PF13333 Integrase core domain GFC28_2293 PF01520 N-acetylmuramoyl-L-alanine amidase GFC28_2293 PF05036 Sporulation related domain GFC28_2301 PF04865 Baseplate J-like protein GFC28_2302 PF10934 Protein of unknown function (DUF2634) GFC28_2303 PF10844 Protein of unknown function (DUF2577) GFC28_2305 PF01476 LysM domain GFC28_2306 PF01464 Transglycosylase SLT domain GFC28_2307 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GFC28_2308 PF09393 Phage tail tube protein GFC28_2309 PF04984 Phage tail sheath protein subtilisin-like domain GFC28_2309 PF17482 Phage tail sheath C-terminal domain GFC28_2309 PF17481 Phage tail sheath protein beta-sandwich domain GFC28_2311 PF04883 Bacteriophage HK97-gp10, putative tail-component GFC28_2312 PF12206 Domain of unknown function (DUF3599) GFC28_2313 PF11436 Protein of unknown function (DUF3199) GFC28_2316 PF14550 Putative phage serine protease XkdF GFC28_2318 PF04233 Phage Mu protein F like protein GFC28_2319 PF04860 Phage portal protein GFC28_232 PF00999 Sodium/hydrogen exchanger family GFC28_232 PF02080 TrkA-C domain GFC28_232 PF02254 TrkA-N domain GFC28_2320 PF04466 Phage terminase large subunit GFC28_2320 PF17288 Terminase RNAseH like domain GFC28_2321 PF10668 Phage terminase small subunit GFC28_2336 PF03837 RecT family GFC28_2337 PF09588 YqaJ-like viral recombinase domain GFC28_234 PF07690 Major Facilitator Superfamily GFC28_235 PF03466 LysR substrate binding domain GFC28_235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_2352 PF00069 Protein kinase domain GFC28_2352 PF03793 PASTA domain GFC28_2357 PF14659 Phage integrase, N-terminal SAM-like domain GFC28_2357 PF00589 Phage integrase family GFC28_2359 PF00166 Chaperonin 10 Kd subunit GFC28_2360 PF02517 CPBP intramembrane metalloprotease GFC28_2362 PF00902 Sec-independent protein translocase protein (TatC) GFC28_2363 PF02416 mttA/Hcf106 family GFC28_2364 PF02629 CoA binding domain GFC28_2364 PF06971 Putative DNA-binding protein N-terminus GFC28_2365 PF01967 MoaC family GFC28_2366 PF00005 ABC transporter GFC28_2366 PF12848 ABC transporter GFC28_2366 PF16326 ABC transporter C-terminal domain GFC28_2367 PF00814 Glycoprotease family GFC28_2368 PF00583 Acetyltransferase (GNAT) family GFC28_2369 PF00814 Glycoprotease family GFC28_237 PF00293 NUDIX domain GFC28_2370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GFC28_2389 PF17283 SprT-like zinc ribbon domain GFC28_2389 PF10263 SprT-like family GFC28_239 PF00665 Integrase core domain GFC28_2391 PF17674 HHH domain GFC28_2391 PF09371 Tex-like protein N-terminal domain GFC28_2391 PF16921 Tex protein YqgF-like domain GFC28_2391 PF00575 S1 RNA binding domain GFC28_2392 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GFC28_2393 PF01402 Ribbon-helix-helix protein, copG family GFC28_2394 PF01168 Alanine racemase, N-terminal domain GFC28_2394 PF00842 Alanine racemase, C-terminal domain GFC28_2396 PF01648 4'-phosphopantetheinyl transferase superfamily GFC28_2397 PF01694 Rhomboid family GFC28_2398 PF00270 DEAD/DEAH box helicase GFC28_2398 PF00271 Helicase conserved C-terminal domain GFC28_2399 PF00561 alpha/beta hydrolase fold GFC28_24 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GFC28_240 PF01695 IstB-like ATP binding protein GFC28_2400 PF08245 Mur ligase middle domain GFC28_2400 PF02875 Mur ligase family, glutamate ligase domain GFC28_2400 PF01225 Mur ligase family, catalytic domain GFC28_2401 PF01820 D-ala D-ala ligase N-terminus GFC28_2401 PF07478 D-ala D-ala ligase C-terminus GFC28_2402 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GFC28_2403 PF09335 SNARE associated Golgi protein GFC28_2404 PF01522 Polysaccharide deacetylase GFC28_2404 PF13739 Deacetylase PdaC GFC28_2404 PF11738 Protein of unknown function (DUF3298) GFC28_2405 PF04101 Glycosyltransferase family 28 C-terminal domain GFC28_2405 PF03033 Glycosyltransferase family 28 N-terminal domain GFC28_2407 PF00196 Bacterial regulatory proteins, luxR family GFC28_2407 PF00072 Response regulator receiver domain GFC28_2415 PF01757 Acyltransferase family GFC28_2416 PF05163 DinB family GFC28_2419 PF02659 Putative manganese efflux pump GFC28_2420 PF13520 Amino acid permease GFC28_2421 PF02386 Cation transport protein GFC28_2424 PF00884 Sulfatase GFC28_2425 PF01323 DSBA-like thioredoxin domain GFC28_2426 PF00376 MerR family regulatory protein GFC28_2426 PF09278 MerR, DNA binding GFC28_2429 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_2430 PF00005 ABC transporter GFC28_2431 PF01497 Periplasmic binding protein GFC28_2432 PF01032 FecCD transport family GFC28_2433 PF01032 FecCD transport family GFC28_2434 PF00756 Putative esterase GFC28_2435 PF00756 Putative esterase GFC28_2436 PF00881 Nitroreductase family GFC28_2437 PF01032 FecCD transport family GFC28_2438 PF01032 FecCD transport family GFC28_2439 PF01497 Periplasmic binding protein GFC28_244 PF02661 Fic/DOC family GFC28_2440 PF12833 Helix-turn-helix domain GFC28_2440 PF01497 Periplasmic binding protein GFC28_2442 PF03621 MbtH-like protein GFC28_2443 PF00975 Thioesterase domain GFC28_2443 PF13193 AMP-binding enzyme C-terminal domain GFC28_2443 PF00550 Phosphopantetheine attachment site GFC28_2443 PF00668 Condensation domain GFC28_2443 PF00501 AMP-binding enzyme GFC28_2444 PF00550 Phosphopantetheine attachment site GFC28_2444 PF00857 Isochorismatase family GFC28_2445 PF13193 AMP-binding enzyme C-terminal domain GFC28_2445 PF00501 AMP-binding enzyme GFC28_2446 PF00425 chorismate binding enzyme GFC28_2447 PF00106 short chain dehydrogenase GFC28_2448 PF08543 Phosphomethylpyrimidine kinase GFC28_2449 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GFC28_2450 PF07687 Peptidase dimerisation domain GFC28_2450 PF01546 Peptidase family M20/M25/M40 GFC28_2454 PF00857 Isochorismatase family GFC28_2455 PF07690 Major Facilitator Superfamily GFC28_2456 PF01497 Periplasmic binding protein GFC28_2456 PF12833 Helix-turn-helix domain GFC28_2457 PF00881 Nitroreductase family GFC28_2460 PF01522 Polysaccharide deacetylase GFC28_2460 PF13739 Deacetylase PdaC GFC28_2460 PF11738 Protein of unknown function (DUF3298) GFC28_2462 PF01638 HxlR-like helix-turn-helix GFC28_2463 PF00795 Carbon-nitrogen hydrolase GFC28_2463 PF00583 Acetyltransferase (GNAT) family GFC28_2464 PF00583 Acetyltransferase (GNAT) family GFC28_2467 PF13419 Haloacid dehalogenase-like hydrolase GFC28_2468 PF01695 IstB-like ATP binding protein GFC28_247 PF00872 Transposase, Mutator family GFC28_2471 PF03781 Sulfatase-modifying factor enzyme 1 GFC28_2472 PF07690 Major Facilitator Superfamily GFC28_2474 PF01380 SIS domain GFC28_2477 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GFC28_2477 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GFC28_2477 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GFC28_2477 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GFC28_2478 PF07949 YbbR-like protein GFC28_2479 PF02457 DisA bacterial checkpoint controller nucleotide-binding GFC28_2480 PF13490 Putative zinc-finger GFC28_2481 PF04542 Sigma-70 region 2 GFC28_2481 PF08281 Sigma-70, region 4 GFC28_2482 PF00491 Arginase family GFC28_25 PF03807 NADP oxidoreductase coenzyme F420-dependent GFC28_25 PF14748 Pyrroline-5-carboxylate reductase dimerisation GFC28_2500 PF01522 Polysaccharide deacetylase GFC28_2501 PF14089 KinB-signalling pathway activation in sporulation GFC28_2502 PF17898 Spore germination GerD central core domain GFC28_2503 PF10609 NUBPL iron-transfer P-loop NTPase GFC28_2504 PF01520 N-acetylmuramoyl-L-alanine amidase GFC28_2505 PF10730 Protein of unknown function (DUF2521) GFC28_2506 PF13181 Tetratricopeptide repeat GFC28_2506 PF00535 Glycosyl transferase family 2 GFC28_2508 PF13181 Tetratricopeptide repeat GFC28_2508 PF00535 Glycosyl transferase family 2 GFC28_2512 PF00380 Ribosomal protein S9/S16 GFC28_2513 PF00572 Ribosomal protein L13 GFC28_2514 PF01416 tRNA pseudouridine synthase GFC28_2516 PF00005 ABC transporter GFC28_2517 PF00005 ABC transporter GFC28_2518 PF01196 Ribosomal protein L17 GFC28_2519 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GFC28_2519 PF01000 RNA polymerase Rpb3/RpoA insert domain GFC28_2519 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GFC28_252 PF00158 Sigma-54 interaction domain GFC28_252 PF00989 PAS fold GFC28_252 PF02954 Bacterial regulatory protein, Fis family GFC28_2520 PF00411 Ribosomal protein S11 GFC28_2521 PF00416 Ribosomal protein S13/S18 GFC28_2522 PF00444 Ribosomal protein L36 GFC28_2523 PF01176 Translation initiation factor 1A / IF-1 GFC28_2525 PF00557 Metallopeptidase family M24 GFC28_2526 PF05191 Adenylate kinase, active site lid GFC28_2527 PF00344 SecY translocase GFC28_2528 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GFC28_2529 PF00327 Ribosomal protein L30p/L7e GFC28_253 PF00753 Metallo-beta-lactamase superfamily GFC28_2530 PF00333 Ribosomal protein S5, N-terminal domain GFC28_2530 PF03719 Ribosomal protein S5, C-terminal domain GFC28_2531 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GFC28_2532 PF00347 Ribosomal protein L6 GFC28_2533 PF00410 Ribosomal protein S8 GFC28_2534 PF00253 Ribosomal protein S14p/S29e GFC28_2535 PF00281 Ribosomal protein L5 GFC28_2535 PF00673 ribosomal L5P family C-terminus GFC28_2536 PF00467 KOW motif GFC28_2536 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GFC28_2537 PF00238 Ribosomal protein L14p/L23e GFC28_2538 PF00366 Ribosomal protein S17 GFC28_2539 PF00831 Ribosomal L29 protein GFC28_254 PF00465 Iron-containing alcohol dehydrogenase GFC28_2540 PF00252 Ribosomal protein L16p/L10e GFC28_2541 PF07650 KH domain GFC28_2541 PF00189 Ribosomal protein S3, C-terminal domain GFC28_2542 PF00237 Ribosomal protein L22p/L17e GFC28_2543 PF00203 Ribosomal protein S19 GFC28_2544 PF03947 Ribosomal Proteins L2, C-terminal domain GFC28_2544 PF00181 Ribosomal Proteins L2, RNA binding domain GFC28_2545 PF00276 Ribosomal protein L23 GFC28_2546 PF00573 Ribosomal protein L4/L1 family GFC28_2547 PF00297 Ribosomal protein L3 GFC28_2548 PF00338 Ribosomal protein S10p/S20e GFC28_2549 PF03143 Elongation factor Tu C-terminal domain GFC28_2549 PF03144 Elongation factor Tu domain 2 GFC28_2549 PF00009 Elongation factor Tu GTP binding domain GFC28_255 PF00245 Alkaline phosphatase GFC28_2550 PF00679 Elongation factor G C-terminus GFC28_2550 PF03144 Elongation factor Tu domain 2 GFC28_2550 PF14492 Elongation Factor G, domain II GFC28_2550 PF03764 Elongation factor G, domain IV GFC28_2550 PF00009 Elongation factor Tu GTP binding domain GFC28_2551 PF00177 Ribosomal protein S7p/S5e GFC28_2552 PF00164 Ribosomal protein S12/S23 GFC28_2553 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GFC28_2554 PF00623 RNA polymerase Rpb1, domain 2 GFC28_2554 PF04997 RNA polymerase Rpb1, domain 1 GFC28_2554 PF04983 RNA polymerase Rpb1, domain 3 GFC28_2554 PF05000 RNA polymerase Rpb1, domain 4 GFC28_2554 PF04998 RNA polymerase Rpb1, domain 5 GFC28_2555 PF04560 RNA polymerase Rpb2, domain 7 GFC28_2555 PF04561 RNA polymerase Rpb2, domain 2 GFC28_2555 PF04563 RNA polymerase beta subunit GFC28_2555 PF00562 RNA polymerase Rpb2, domain 6 GFC28_2555 PF10385 RNA polymerase beta subunit external 1 domain GFC28_2555 PF04565 RNA polymerase Rpb2, domain 3 GFC28_2556 PF05175 Methyltransferase small domain GFC28_2557 PF16320 Ribosomal protein L7/L12 dimerisation domain GFC28_2557 PF00542 Ribosomal protein L7/L12 C-terminal domain GFC28_2558 PF00466 Ribosomal protein L10 GFC28_256 PF03401 Tripartite tricarboxylate transporter family receptor GFC28_2560 PF00687 Ribosomal protein L1p/L10e family GFC28_2561 PF00298 Ribosomal protein L11, RNA binding domain GFC28_2561 PF03946 Ribosomal protein L11, N-terminal domain GFC28_2562 PF02357 Transcription termination factor nusG GFC28_2562 PF00467 KOW motif GFC28_2563 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GFC28_2564 PF04542 Sigma-70 region 2 GFC28_2564 PF08281 Sigma-70, region 4 GFC28_2565 PF05991 YacP-like NYN domain GFC28_2566 PF00588 SpoU rRNA Methylase family GFC28_2566 PF08032 RNA 2'-O ribose methyltransferase substrate binding GFC28_2567 PF00636 Ribonuclease III domain GFC28_2568 PF09190 DALR domain GFC28_2568 PF01406 tRNA synthetases class I (C) catalytic domain GFC28_2569 PF00132 Bacterial transferase hexapeptide (six repeats) GFC28_2569 PF06426 Serine acetyltransferase, N-terminal GFC28_2570 PF00749 tRNA synthetases class I (E and Q), catalytic domain GFC28_2571 PF02542 YgbB family GFC28_2572 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GFC28_2574 PF18073 Rubredoxin metal binding domain GFC28_2575 PF17871 AAA lid domain GFC28_2575 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_2575 PF02861 Clp amino terminal domain, pathogenicity island component GFC28_2575 PF07724 AAA domain (Cdc48 subfamily) GFC28_2575 PF10431 C-terminal, D2-small domain, of ClpB protein GFC28_2576 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GFC28_2577 PF02151 UvrB/uvrC motif GFC28_2578 PF05848 CtsR N-terminal HTH domain GFC28_2578 PF17727 CtsR C-terminal dimerization domain GFC28_258 PF01970 Tripartite tricarboxylate transporter TctA family GFC28_259 PF17203 Single cache domain 3 GFC28_259 PF00989 PAS fold GFC28_259 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GFC28_259 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2599 PF01336 OB-fold nucleic acid binding domain GFC28_2599 PF00152 tRNA synthetases class II (D, K and N) GFC28_26 PF00753 Metallo-beta-lactamase superfamily GFC28_260 PF00072 Response regulator receiver domain GFC28_2600 PF01207 Dihydrouridine synthase (Dus) GFC28_2601 PF01381 Helix-turn-helix GFC28_2602 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GFC28_2603 PF02152 Dihydroneopterin aldolase GFC28_2604 PF00809 Pterin binding enzyme GFC28_2605 PF01063 Amino-transferase class IV GFC28_2606 PF00117 Glutamine amidotransferase class-I GFC28_2607 PF00425 chorismate binding enzyme GFC28_2607 PF04715 Anthranilate synthase component I, N terminal region GFC28_2608 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_2609 PF01430 Hsp33 protein GFC28_2610 PF03309 Type III pantothenate kinase GFC28_2611 PF06480 FtsH Extracellular GFC28_2611 PF01434 Peptidase family M41 GFC28_2611 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_2611 PF17862 AAA+ lid domain GFC28_2613 PF09179 TilS substrate binding domain GFC28_2613 PF11734 TilS substrate C-terminal domain GFC28_2613 PF01171 PP-loop family GFC28_2614 PF00069 Protein kinase domain GFC28_2615 PF00092 von Willebrand factor type A domain GFC28_2616 PF07228 Stage II sporulation protein E (SpoIIE) GFC28_2619 PF00575 S1 RNA binding domain GFC28_2621 PF09578 Spore cortex protein YabQ (Spore_YabQ) GFC28_2622 PF07873 YabP family GFC28_2623 PF01479 S4 domain GFC28_2624 PF03819 MazG nucleotide pyrophosphohydrolase domain GFC28_2624 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_2625 PF14667 Polysaccharide biosynthesis C-terminal domain GFC28_2625 PF01943 Polysaccharide biosynthesis protein GFC28_2626 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GFC28_2626 PF15714 Stage V sporulation protein T C-terminal, transcription factor GFC28_2627 PF17757 UvrB interaction domain GFC28_2627 PF03461 TRCF domain GFC28_2627 PF00271 Helicase conserved C-terminal domain GFC28_2627 PF00270 DEAD/DEAH box helicase GFC28_2627 PF02559 CarD-like/TRCF domain GFC28_2628 PF10955 Protein of unknown function (DUF2757) GFC28_2629 PF01195 Peptidyl-tRNA hydrolase GFC28_2630 PF14693 Ribosomal protein TL5, C-terminal domain GFC28_2630 PF01386 Ribosomal L25p family GFC28_2631 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GFC28_2631 PF14572 Phosphoribosyl synthetase-associated domain GFC28_2632 PF00132 Bacterial transferase hexapeptide (six repeats) GFC28_2632 PF00483 Nucleotidyl transferase GFC28_2633 PF04026 SpoVG GFC28_2634 PF01042 Endoribonuclease L-PSP GFC28_2635 PF00156 Phosphoribosyl transferase domain GFC28_2635 PF09182 Bacterial purine repressor, N-terminal GFC28_2636 PF08544 GHMP kinases C terminal GFC28_2636 PF00288 GHMP kinases N terminal domain GFC28_2637 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC28_2638 PF06257 Biofilm formation stimulator VEG GFC28_2639 PF05582 YabG peptidase U57 GFC28_2640 PF00398 Ribosomal RNA adenine dimethylase GFC28_2641 PF13662 Toprim domain GFC28_2641 PF13331 Domain of unknown function (DUF4093) GFC28_2642 PF07501 G5 domain GFC28_2642 PF03990 G5-linked-Ubiquitin-like domain GFC28_2642 PF06725 3D domain GFC28_2643 PF01026 TatD related DNase GFC28_2644 PF09334 tRNA synthetases class I (M) GFC28_2644 PF01588 Putative tRNA binding domain GFC28_2644 PF08264 Anticodon-binding domain of tRNA GFC28_2645 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GFC28_2645 PF18277 AbrB C-terminal domain GFC28_2646 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_2647 PF05175 Methyltransferase small domain GFC28_2648 PF06156 Initiation control protein YabA GFC28_2649 PF04468 PSP1 C-terminal conserved region GFC28_2650 PF09115 DNA polymerase III, delta subunit, C terminal GFC28_2651 PF02223 Thymidylate kinase GFC28_2652 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GFC28_2652 PF01276 Orn/Lys/Arg decarboxylase, major domain GFC28_2654 PF00665 Integrase core domain GFC28_2654 PF13333 Integrase core domain GFC28_2654 PF13276 HTH-like domain GFC28_2655 PF00665 Integrase core domain GFC28_2655 PF13276 HTH-like domain GFC28_2655 PF13333 Integrase core domain GFC28_266 PF13520 Amino acid permease GFC28_2662 PF07441 SigmaK-factor processing regulatory protein BofA GFC28_2663 PF10704 Protein of unknown function (DUF2508) GFC28_2664 PF02132 RecR protein GFC28_2664 PF13662 Toprim domain GFC28_2665 PF02575 YbaB/EbfC DNA-binding family GFC28_2666 PF12169 DNA polymerase III subunits gamma and tau domain III GFC28_2667 PF14437 MafB19-like deaminase GFC28_2668 PF00704 Glycosyl hydrolases family 18 GFC28_2668 PF01476 LysM domain GFC28_2669 PF01712 Deoxynucleoside kinase GFC28_2670 PF01712 Deoxynucleoside kinase GFC28_2672 PF02403 Seryl-tRNA synthetase N-terminal domain GFC28_2672 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC28_2673 PF01174 SNO glutamine amidotransferase family GFC28_2674 PF01680 SOR/SNZ family GFC28_2675 PF07943 Penicillin-binding protein 5, C-terminal domain GFC28_2675 PF00768 D-alanyl-D-alanine carboxypeptidase GFC28_2676 PF00478 IMP dehydrogenase / GMP reductase domain GFC28_2676 PF00571 CBS domain GFC28_2677 PF14175 YaaC-like Protein GFC28_268 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC28_268 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC28_2685 PF11871 Domain of unknown function (DUF3391) GFC28_2685 PF01966 HD domain GFC28_2686 PF03989 DNA gyrase C-terminal domain, beta-propeller GFC28_2686 PF00521 DNA gyrase/topoisomerase IV, subunit A GFC28_2687 PF01751 Toprim domain GFC28_2687 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2687 PF00986 DNA gyrase B subunit, carboxyl terminus GFC28_2687 PF00204 DNA gyrase B GFC28_2688 PF02463 RecF/RecN/SMC N terminal domain GFC28_269 PF00005 ABC transporter GFC28_2690 PF00712 DNA polymerase III beta subunit, N-terminal domain GFC28_2690 PF02767 DNA polymerase III beta subunit, central domain GFC28_2690 PF02768 DNA polymerase III beta subunit, C-terminal domain GFC28_2691 PF08299 Bacterial dnaA protein helix-turn-helix GFC28_2691 PF00308 Bacterial dnaA protein GFC28_2691 PF11638 DnaA N-terminal domain GFC28_2692 PF00468 Ribosomal protein L34 GFC28_2693 PF00825 Ribonuclease P GFC28_2694 PF02096 60Kd inner membrane protein GFC28_2695 PF14804 Jag N-terminus GFC28_2695 PF01424 R3H domain GFC28_2696 PF01926 50S ribosome-binding GTPase GFC28_2696 PF12631 MnmE helical domain GFC28_2696 PF10396 GTP-binding protein TrmE N-terminus GFC28_2697 PF01134 Glucose inhibited division protein A GFC28_2697 PF13932 GidA associated domain GFC28_2698 PF02527 rRNA small subunit methyltransferase G GFC28_2699 PF17762 HTH domain found in ParB protein GFC28_2699 PF02195 ParB-like nuclease domain GFC28_27 PF00106 short chain dehydrogenase GFC28_270 PF02653 Branched-chain amino acid transport system / permease component GFC28_2700 PF13614 AAA domain GFC28_2701 PF17762 HTH domain found in ParB protein GFC28_2701 PF02195 ParB-like nuclease domain GFC28_2703 PF06866 Protein of unknown function (DUF1256) GFC28_2704 PF00924 Mechanosensitive ion channel GFC28_2705 PF06107 Bacterial protein of unknown function (DUF951) GFC28_2706 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GFC28_2706 PF01568 Molydopterin dinucleotide binding domain GFC28_2706 PF00384 Molybdopterin oxidoreductase GFC28_2707 PF01926 50S ribosome-binding GTPase GFC28_2707 PF06071 Protein of unknown function (DUF933) GFC28_2708 PF01250 Ribosomal protein S6 GFC28_2709 PF00436 Single-strand binding protein family GFC28_271 PF13407 Periplasmic binding protein domain GFC28_2710 PF01084 Ribosomal protein S18 GFC28_2711 PF09991 Predicted membrane protein (DUF2232) GFC28_2712 PF01368 DHH family GFC28_2712 PF02272 DHHA1 domain GFC28_2713 PF01281 Ribosomal protein L9, N-terminal domain GFC28_2713 PF03948 Ribosomal protein L9, C-terminal domain GFC28_2714 PF03796 DnaB-like helicase C terminal domain GFC28_2714 PF00772 DnaB-like helicase N terminal domain GFC28_2715 PF00709 Adenylosuccinate synthetase GFC28_2716 PF00486 Transcriptional regulatory protein, C terminal GFC28_2716 PF00072 Response regulator receiver domain GFC28_2717 PF13426 PAS domain GFC28_2717 PF00512 His Kinase A (phospho-acceptor) domain GFC28_2717 PF00672 HAMP domain GFC28_2717 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2718 PF07435 YycH protein GFC28_2719 PF09648 YycH protein GFC28_272 PF00356 Bacterial regulatory proteins, lacI family GFC28_2720 PF00753 Metallo-beta-lactamase superfamily GFC28_2721 PF13180 PDZ domain GFC28_2723 PF02590 Predicted SPOUT methyltransferase GFC28_2724 PF01381 Helix-turn-helix GFC28_2725 PF01047 MarR family GFC28_2726 PF07690 Major Facilitator Superfamily GFC28_2727 PF00005 ABC transporter GFC28_2727 PF13732 Domain of unknown function (DUF4162) GFC28_2728 PF01061 ABC-2 type transporter GFC28_273 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC28_273 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC28_2730 PF01168 Alanine racemase, N-terminal domain GFC28_2731 PF02595 Glycerate kinase family GFC28_2732 PF01235 Sodium:alanine symporter family GFC28_2733 PF00355 Rieske [2Fe-2S] domain GFC28_2733 PF01266 FAD dependent oxidoreductase GFC28_2735 PF13458 Periplasmic binding protein GFC28_2736 PF02653 Branched-chain amino acid transport system / permease component GFC28_2737 PF02653 Branched-chain amino acid transport system / permease component GFC28_2737 PF11862 Domain of unknown function (DUF3382) GFC28_2738 PF00005 ABC transporter GFC28_2738 PF12399 Branched-chain amino acid ATP-binding cassette transporter GFC28_2739 PF00005 ABC transporter GFC28_274 PF00294 pfkB family carbohydrate kinase GFC28_2740 PF12105 SpoU, rRNA methylase, C-terminal GFC28_2740 PF00588 SpoU rRNA Methylase family GFC28_2741 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GFC28_2742 PF00115 Cytochrome C and Quinol oxidase polypeptide I GFC28_2743 PF00510 Cytochrome c oxidase subunit III GFC28_2744 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GFC28_2745 PF00005 ABC transporter GFC28_2746 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_2747 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC28_2748 PF00474 Sodium:solute symporter family GFC28_2749 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GFC28_2749 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GFC28_275 PF00171 Aldehyde dehydrogenase family GFC28_2750 PF13556 PucR C-terminal helix-turn-helix domain GFC28_2750 PF17853 GGDEF-like domain GFC28_2750 PF06018 CodY GAF-like domain GFC28_2751 PF01546 Peptidase family M20/M25/M40 GFC28_2752 PF07690 Major Facilitator Superfamily GFC28_2753 PF00535 Glycosyl transferase family 2 GFC28_2754 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC28_2754 PF03129 Anticodon binding domain GFC28_2757 PF03167 Uracil DNA glycosylase superfamily GFC28_276 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC28_276 PF00205 Thiamine pyrophosphate enzyme, central domain GFC28_276 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GFC28_2760 PF04241 Protein of unknown function (DUF423) GFC28_2761 PF09671 Spore coat protein (Spore_GerQ) GFC28_2762 PF07486 Cell Wall Hydrolase GFC28_2764 PF01515 Phosphate acetyl/butaryl transferase GFC28_2765 PF03099 Biotin/lipoate A/B protein ligase family GFC28_2767 PF07293 Protein of unknown function (DUF1450) GFC28_2768 PF01966 HD domain GFC28_277 PF01261 Xylose isomerase-like TIM barrel GFC28_2771 PF00860 Permease family GFC28_2772 PF01361 Tautomerase enzyme GFC28_2773 PF02163 Peptidase family M50 GFC28_2774 PF08741 YwhD family GFC28_2775 PF00905 Penicillin binding protein transpeptidase domain GFC28_2775 PF00912 Transglycosylase GFC28_2777 PF00491 Arginase family GFC28_2778 PF09148 Domain of unknown function (DUF1934) GFC28_2779 PF05746 DALR anticodon binding domain GFC28_2779 PF03485 Arginyl tRNA synthetase N terminal domain GFC28_2779 PF00750 tRNA synthetases class I (R) GFC28_278 PF01116 Fructose-bisphosphate aldolase class-II GFC28_2781 PF13091 PLD-like domain GFC28_2782 PF02754 Cysteine-rich domain GFC28_2782 PF13183 4Fe-4S dicluster domain GFC28_2783 PF00108 Thiolase, N-terminal domain GFC28_2783 PF02803 Thiolase, C-terminal domain GFC28_2784 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC28_2784 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC28_2785 PF02770 Acyl-CoA dehydrogenase, middle domain GFC28_2785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC28_2785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC28_2786 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC28_2786 PF02770 Acyl-CoA dehydrogenase, middle domain GFC28_2786 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC28_2788 PF01642 Methylmalonyl-CoA mutase GFC28_2788 PF02310 B12 binding domain GFC28_2789 PF05066 HB1, ASXL, restriction endonuclease HTH domain GFC28_279 PF04962 KduI/IolB family GFC28_2790 PF06418 CTP synthase N-terminus GFC28_2790 PF00117 Glutamine amidotransferase class-I GFC28_2791 PF10740 Domain of unknown function (DUF2529) GFC28_2792 PF00072 Response regulator receiver domain GFC28_2793 PF01116 Fructose-bisphosphate aldolase class-II GFC28_2794 PF00923 Transaldolase/Fructose-6-phosphate aldolase GFC28_2795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GFC28_2796 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GFC28_2797 PF07497 Rho termination factor, RNA-binding domain GFC28_2797 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC28_2797 PF07498 Rho termination factor, N-terminal domain GFC28_2798 PF01197 Ribosomal protein L31 GFC28_2799 PF00265 Thymidine kinase GFC28_2801 PF00465 Iron-containing alcohol dehydrogenase GFC28_2802 PF00072 Response regulator receiver domain GFC28_2802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2802 PF08448 PAS fold GFC28_2802 PF13188 PAS domain GFC28_2802 PF00512 His Kinase A (phospho-acceptor) domain GFC28_2803 PF00072 Response regulator receiver domain GFC28_2803 PF02954 Bacterial regulatory protein, Fis family GFC28_2803 PF00158 Sigma-54 interaction domain GFC28_2804 PF00171 Aldehyde dehydrogenase family GFC28_2805 PF00107 Zinc-binding dehydrogenase GFC28_2805 PF08240 Alcohol dehydrogenase GroES-like domain GFC28_2806 PF03462 PCRF domain GFC28_2806 PF00472 RF-1 domain GFC28_2807 PF13847 Methyltransferase domain GFC28_2807 PF17827 PrmC N-terminal domain GFC28_2808 PF09551 Stage II sporulation protein R (spore_II_R) GFC28_2809 PF03481 Putative GTP-binding controlling metal-binding GFC28_2809 PF01300 Telomere recombination GFC28_2810 PF02659 Putative manganese efflux pump GFC28_2811 PF01451 Low molecular weight phosphotyrosine protein phosphatase GFC28_2812 PF00672 HAMP domain GFC28_2812 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_2812 PF02743 Cache domain GFC28_2813 PF02502 Ribose/Galactose Isomerase GFC28_2814 PF04260 Protein of unknown function (DUF436) GFC28_2815 PF00464 Serine hydroxymethyltransferase GFC28_2818 PF03899 ATP synthase I chain GFC28_2819 PF00119 ATP synthase A chain GFC28_2820 PF00137 ATP synthase subunit C GFC28_2821 PF00430 ATP synthase B/B' CF(0) GFC28_2822 PF00213 ATP synthase delta (OSCP) subunit GFC28_2823 PF02874 ATP synthase alpha/beta family, beta-barrel domain GFC28_2823 PF00306 ATP synthase alpha/beta chain, C terminal domain GFC28_2823 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC28_2824 PF00231 ATP synthase GFC28_2825 PF02874 ATP synthase alpha/beta family, beta-barrel domain GFC28_2825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC28_2826 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GFC28_2826 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GFC28_2827 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GFC28_2828 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GFC28_2829 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GFC28_2830 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GFC28_2831 PF00146 NADH dehydrogenase GFC28_2833 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GFC28_2834 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GFC28_2835 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GFC28_2835 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus GFC28_2835 PF00361 Proton-conducting membrane transporter GFC28_2836 PF00361 Proton-conducting membrane transporter GFC28_2837 PF00361 Proton-conducting membrane transporter GFC28_2838 PF06612 Protein of unknown function (DUF1146) GFC28_2839 PF08680 TATA-box binding GFC28_2840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GFC28_2841 PF08486 Stage II sporulation protein GFC28_2842 PF01551 Peptidase family M23 GFC28_2844 PF12116 Stage III sporulation protein D GFC28_2846 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC28_2846 PF00460 Flagella basal body rod protein GFC28_2847 PF00460 Flagella basal body rod protein GFC28_2847 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC28_2849 PF07977 FabA-like domain GFC28_285 PF08494 DEAD/H associated GFC28_285 PF00271 Helicase conserved C-terminal domain GFC28_285 PF00270 DEAD/DEAH box helicase GFC28_2853 PF00356 Bacterial regulatory proteins, lacI family GFC28_2854 PF04041 beta-1,4-mannooligosaccharide phosphorylase GFC28_2856 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_2857 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_2860 PF01238 Phosphomannose isomerase type I GFC28_2861 PF00356 Bacterial regulatory proteins, lacI family GFC28_2862 PF00294 pfkB family carbohydrate kinase GFC28_2863 PF05025 RbsD / FucU transport protein family GFC28_2864 PF00005 ABC transporter GFC28_2865 PF02653 Branched-chain amino acid transport system / permease component GFC28_2866 PF13407 Periplasmic binding protein domain GFC28_2868 PF00563 EAL domain GFC28_2868 PF12792 CSS motif domain associated with EAL GFC28_2870 PF01238 Phosphomannose isomerase type I GFC28_2871 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_2872 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GFC28_2873 PF02378 Phosphotransferase system, EIIC GFC28_2874 PF00232 Glycosyl hydrolase family 1 GFC28_2875 PF00392 Bacterial regulatory proteins, gntR family GFC28_2875 PF07702 UTRA domain GFC28_2877 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC28_2877 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC28_2878 PF00480 ROK family GFC28_2880 PF00440 Bacterial regulatory proteins, tetR family GFC28_2881 PF07690 Major Facilitator Superfamily GFC28_2882 PF13977 BetI-type transcriptional repressor, C-terminal GFC28_2882 PF00440 Bacterial regulatory proteins, tetR family GFC28_2886 PF00171 Aldehyde dehydrogenase family GFC28_2891 PF00696 Amino acid kinase family GFC28_2891 PF13840 ACT domain GFC28_2893 PF04203 Sortase domain GFC28_2894 PF14183 YwpF-like protein GFC28_2895 PF00436 Single-strand binding protein family GFC28_2898 PF12419 SNF2 Helicase protein GFC28_2898 PF00271 Helicase conserved C-terminal domain GFC28_2898 PF00176 SNF2 family N-terminal domain GFC28_2900 PF01476 LysM domain GFC28_2900 PF00877 NlpC/P60 family GFC28_2901 PF03816 Cell envelope-related transcriptional attenuator domain GFC28_2902 PF02350 UDP-N-acetylglucosamine 2-epimerase GFC28_2904 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFC28_2904 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFC28_2904 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GFC28_2905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GFC28_2905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFC28_2905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFC28_2906 PF03808 Glycosyl transferase WecB/TagA/CpsF family GFC28_2907 PF03023 Lipid II flippase MurJ GFC28_2910 PF07516 SecA Wing and Scaffold domain GFC28_2910 PF07517 SecA DEAD-like domain GFC28_2910 PF01043 SecA preprotein cross-linking domain GFC28_2911 PF00082 Subtilase family GFC28_2912 PF00395 S-layer homology domain GFC28_2912 PF02903 Alpha amylase, N-terminal ig-like domain GFC28_2912 PF00128 Alpha amylase, catalytic domain GFC28_2914 PF00877 NlpC/P60 family GFC28_2915 PF00395 S-layer homology domain GFC28_2915 PF13205 Bacterial Ig-like domain GFC28_2915 PF02368 Bacterial Ig-like domain (group 2) GFC28_2917 PF00665 Integrase core domain GFC28_2917 PF02796 Helix-turn-helix domain of resolvase GFC28_2919 PF01695 IstB-like ATP binding protein GFC28_2922 PF01695 IstB-like ATP binding protein GFC28_2923 PF00395 S-layer homology domain GFC28_2927 PF02899 Phage integrase, N-terminal SAM-like domain GFC28_2927 PF00589 Phage integrase family GFC28_2935 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GFC28_294 PF10114 Sensory domain found in PocR GFC28_294 PF12833 Helix-turn-helix domain GFC28_2941 PF01027 Inhibitor of apoptosis-promoting Bax1 GFC28_2942 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC28_2942 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC28_2944 PF00230 Major intrinsic protein GFC28_2945 PF00381 PTS HPr component phosphorylation site GFC28_2946 PF00391 PEP-utilising enzyme, mobile domain GFC28_2946 PF05524 PEP-utilising enzyme, N-terminal GFC28_2946 PF03610 PTS system fructose IIA component GFC28_2946 PF00381 PTS HPr component phosphorylation site GFC28_2947 PF02734 DAK2 domain GFC28_2948 PF02733 Dak1 domain GFC28_2949 PF02954 Bacterial regulatory protein, Fis family GFC28_2949 PF00989 PAS fold GFC28_2949 PF00158 Sigma-54 interaction domain GFC28_295 PF13478 XdhC Rossmann domain GFC28_295 PF02625 XdhC and CoxI family GFC28_2950 PF01266 FAD dependent oxidoreductase GFC28_2950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GFC28_2951 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_2951 PF03466 LysR substrate binding domain GFC28_2952 PF05118 Aspartyl/Asparaginyl beta-hydroxylase GFC28_2952 PF05373 L-proline 3-hydroxylase, C-terminal GFC28_2953 PF05373 L-proline 3-hydroxylase, C-terminal GFC28_2953 PF05118 Aspartyl/Asparaginyl beta-hydroxylase GFC28_2955 PF00072 Response regulator receiver domain GFC28_2955 PF00486 Transcriptional regulatory protein, C terminal GFC28_2956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2957 PF00005 ABC transporter GFC28_2958 PF02687 FtsX-like permease family GFC28_2959 PF03992 Antibiotic biosynthesis monooxygenase GFC28_2964 PF10437 Bacterial lipoate protein ligase C-terminus GFC28_2964 PF03099 Biotin/lipoate A/B protein ligase family GFC28_2967 PF13332 Hemagglutinin repeat GFC28_2967 PF02661 Fic/DOC family GFC28_2967 PF13018 Extended Signal Peptide of Type V secretion system GFC28_2967 PF03543 Yersinia/Haemophilus virulence surface antigen GFC28_2967 PF05860 haemagglutination activity domain GFC28_2969 PF01654 Cytochrome bd terminal oxidase subunit I GFC28_297 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GFC28_297 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GFC28_2970 PF02322 Cytochrome bd terminal oxidase subunit II GFC28_2971 PF00664 ABC transporter transmembrane region GFC28_2971 PF00005 ABC transporter GFC28_2972 PF00664 ABC transporter transmembrane region GFC28_2972 PF00005 ABC transporter GFC28_2976 PF04203 Sortase domain GFC28_2980 PF01497 Periplasmic binding protein GFC28_2981 PF01522 Polysaccharide deacetylase GFC28_2982 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GFC28_2982 PF08239 Bacterial SH3 domain GFC28_2982 PF05036 Sporulation related domain GFC28_2983 PF00082 Subtilase family GFC28_2984 PF00395 S-layer homology domain GFC28_2984 PF01520 N-acetylmuramoyl-L-alanine amidase GFC28_2986 PF13439 Glycosyltransferase Family 4 GFC28_2986 PF00534 Glycosyl transferases group 1 GFC28_2989 PF03023 Lipid II flippase MurJ GFC28_299 PF00941 FAD binding domain in molybdopterin dehydrogenase GFC28_299 PF03450 CO dehydrogenase flavoprotein C-terminal domain GFC28_2990 PF00953 Glycosyl transferase family 4 GFC28_2991 PF03816 Cell envelope-related transcriptional attenuator domain GFC28_2992 PF01205 Uncharacterized protein family UPF0029 GFC28_2992 PF09186 Domain of unknown function (DUF1949) GFC28_2993 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_2993 PF07730 Histidine kinase GFC28_2993 PF05384 Sensor protein DegS GFC28_2994 PF00196 Bacterial regulatory proteins, luxR family GFC28_2994 PF00072 Response regulator receiver domain GFC28_2995 PF02645 Uncharacterised protein, DegV family COG1307 GFC28_2996 PF00271 Helicase conserved C-terminal domain GFC28_2996 PF04851 Type III restriction enzyme, res subunit GFC28_2997 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GFC28_2997 PF14572 Phosphoribosyl synthetase-associated domain GFC28_3 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC28_300 PF00111 2Fe-2S iron-sulfur cluster binding domain GFC28_300 PF01799 [2Fe-2S] binding domain GFC28_3000 PF03885 Protein of unknown function (DUF327) GFC28_3002 PF04316 Anti-sigma-28 factor, FlgM GFC28_3004 PF00460 Flagella basal body rod protein GFC28_3004 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC28_3005 PF00669 Bacterial flagellin N-terminal helical region GFC28_3005 PF00700 Bacterial flagellin C-terminal helical region GFC28_3007 PF02623 FliW protein GFC28_3008 PF02599 Global regulator protein family GFC28_3009 PF00669 Bacterial flagellin N-terminal helical region GFC28_3009 PF00700 Bacterial flagellin C-terminal helical region GFC28_301 PF13193 AMP-binding enzyme C-terminal domain GFC28_301 PF00501 AMP-binding enzyme GFC28_3014 PF01370 NAD dependent epimerase/dehydratase family GFC28_3015 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GFC28_3016 PF02350 UDP-N-acetylglucosamine 2-epimerase GFC28_3017 PF03102 NeuB family GFC28_3017 PF08666 SAF domain GFC28_3019 PF00483 Nucleotidyl transferase GFC28_302 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3020 PF02348 Cytidylyltransferase GFC28_3021 PF00700 Bacterial flagellin C-terminal helical region GFC28_3021 PF00669 Bacterial flagellin N-terminal helical region GFC28_3023 PF02465 Flagellar hook-associated protein 2 N-terminus GFC28_3023 PF07196 Flagellin hook IN motif GFC28_3023 PF07195 Flagellar hook-associated protein 2 C-terminus GFC28_3024 PF02561 Flagellar protein FliS GFC28_3028 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GFC28_3028 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GFC28_303 PF07690 Major Facilitator Superfamily GFC28_303 PF00083 Sugar (and other) transporter GFC28_3030 PF02810 SEC-C motif GFC28_3030 PF07517 SecA DEAD-like domain GFC28_3030 PF07516 SecA Wing and Scaffold domain GFC28_3030 PF01043 SecA preprotein cross-linking domain GFC28_3031 PF03462 PCRF domain GFC28_3031 PF00472 RF-1 domain GFC28_3032 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC28_3032 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC28_3033 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GFC28_3034 PF00005 ABC transporter GFC28_3035 PF18075 FtsX extracellular domain GFC28_3035 PF02687 FtsX-like permease family GFC28_3036 PF00877 NlpC/P60 family GFC28_3037 PF00578 AhpC/TSA family GFC28_3038 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3038 PF13192 Thioredoxin domain GFC28_3039 PF13411 MerR HTH family regulatory protein GFC28_304 PF01695 IstB-like ATP binding protein GFC28_3040 PF04298 Putative neutral zinc metallopeptidase GFC28_3041 PF01595 Cyclin M transmembrane N-terminal domain GFC28_3041 PF03471 Transporter associated domain GFC28_3041 PF00571 CBS domain GFC28_3044 PF01022 Bacterial regulatory protein, arsR family GFC28_3045 PF01545 Cation efflux family GFC28_3045 PF16916 Dimerisation domain of Zinc Transporter GFC28_3046 PF01471 Putative peptidoglycan binding domain GFC28_3046 PF17820 PDZ domain GFC28_3046 PF03572 Peptidase family S41 GFC28_3048 PF00535 Glycosyl transferase family 2 GFC28_3053 PF13358 DDE superfamily endonuclease GFC28_3055 PF13411 MerR HTH family regulatory protein GFC28_3056 PF17820 PDZ domain GFC28_3057 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GFC28_3058 PF12344 Ultra-violet resistance protein B GFC28_3058 PF17757 UvrB interaction domain GFC28_3058 PF02151 UvrB/uvrC motif GFC28_3058 PF04851 Type III restriction enzyme, res subunit GFC28_3058 PF00271 Helicase conserved C-terminal domain GFC28_3059 PF17755 UvrA DNA-binding domain GFC28_3059 PF17760 UvrA interaction domain GFC28_3059 PF00005 ABC transporter GFC28_306 PF13276 HTH-like domain GFC28_306 PF00665 Integrase core domain GFC28_306 PF13333 Integrase core domain GFC28_3061 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GFC28_3062 PF02603 HPr Serine kinase N terminus GFC28_3062 PF07475 HPr Serine kinase C-terminal domain GFC28_3063 PF01790 Prolipoprotein diacylglyceryl transferase GFC28_3064 PF07670 Nucleoside recognition GFC28_3065 PF13419 Haloacid dehalogenase-like hydrolase GFC28_3066 PF14602 Hexapeptide repeat of succinyl-transferase GFC28_3068 PF13393 Histidyl-tRNA synthetase GFC28_3069 PF01634 ATP phosphoribosyltransferase GFC28_3070 PF00815 Histidinol dehydrogenase GFC28_3071 PF00475 Imidazoleglycerol-phosphate dehydratase GFC28_3072 PF00117 Glutamine amidotransferase class-I GFC28_3073 PF00977 Histidine biosynthesis protein GFC28_3074 PF00977 Histidine biosynthesis protein GFC28_3075 PF01502 Phosphoribosyl-AMP cyclohydrolase GFC28_3075 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GFC28_3077 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3078 PF00293 NUDIX domain GFC28_3079 PF03668 P-loop ATPase protein family GFC28_3080 PF01933 Uncharacterised protein family UPF0052 GFC28_3081 PF14527 WhiA LAGLIDADG-like domain GFC28_3081 PF02650 WhiA C-terminal HTH domain GFC28_3081 PF10298 WhiA N-terminal LAGLIDADG-like domain GFC28_3082 PF00381 PTS HPr component phosphorylation site GFC28_3083 PF00574 Clp protease GFC28_3086 PF04552 Sigma-54, DNA binding domain GFC28_3086 PF00309 Sigma-54 factor, Activator interacting domain (AID) GFC28_3086 PF04963 Sigma-54 factor, core binding domain GFC28_3088 PF04198 Putative sugar-binding domain GFC28_3089 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFC28_3089 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFC28_3090 PF00162 Phosphoglycerate kinase GFC28_3091 PF00121 Triosephosphate isomerase GFC28_3092 PF01676 Metalloenzyme superfamily GFC28_3092 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GFC28_3093 PF00113 Enolase, C-terminal TIM barrel domain GFC28_3093 PF03952 Enolase, N-terminal domain GFC28_3095 PF03840 Preprotein translocase SecG subunit GFC28_3096 PF12146 Serine aminopeptidase, S33 GFC28_3097 PF17876 Cold shock domain GFC28_3097 PF00773 RNB domain GFC28_3097 PF00575 S1 RNA binding domain GFC28_3097 PF08206 Ribonuclease B OB domain GFC28_3098 PF01668 SmpB protein GFC28_3099 PF05593 RHS Repeat GFC28_310 PF01569 PAP2 superfamily GFC28_3101 PF05593 RHS Repeat GFC28_3103 PF05593 RHS Repeat GFC28_3105 PF05593 RHS Repeat GFC28_3107 PF05593 RHS Repeat GFC28_3109 PF00872 Transposase, Mutator family GFC28_311 PF00534 Glycosyl transferases group 1 GFC28_311 PF13439 Glycosyltransferase Family 4 GFC28_3110 PF00719 Inorganic pyrophosphatase GFC28_3115 PF00005 ABC transporter GFC28_3118 PF00719 Inorganic pyrophosphatase GFC28_3119 PF00440 Bacterial regulatory proteins, tetR family GFC28_3121 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3122 PF02607 B12 binding domain GFC28_3122 PF13411 MerR HTH family regulatory protein GFC28_3123 PF10835 Protein of unknown function (DUF2573) GFC28_3124 PF00990 Diguanylate cyclase, GGDEF domain GFC28_3125 PF00664 ABC transporter transmembrane region GFC28_3125 PF00005 ABC transporter GFC28_3126 PF00005 ABC transporter GFC28_3126 PF00664 ABC transporter transmembrane region GFC28_3127 PF00881 Nitroreductase family GFC28_3130 PF10612 Spore coat protein Z GFC28_3131 PF07552 Spore Coat Protein X and V domain GFC28_3133 PF07098 Protein of unknown function (DUF1360) GFC28_314 PF13276 HTH-like domain GFC28_314 PF13333 Integrase core domain GFC28_314 PF00665 Integrase core domain GFC28_3141 PF00535 Glycosyl transferase family 2 GFC28_3146 PF03649 Uncharacterised protein family (UPF0014) GFC28_315 PF00005 ABC transporter GFC28_3150 PF07875 Coat F domain GFC28_3152 PF01619 Proline dehydrogenase GFC28_3153 PF14115 YuzL-like protein GFC28_3154 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC28_3154 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3154 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC28_3155 PF00108 Thiolase, N-terminal domain GFC28_3155 PF02803 Thiolase, C-terminal domain GFC28_3156 PF02770 Acyl-CoA dehydrogenase, middle domain GFC28_3156 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC28_3156 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC28_3157 PF03960 ArsC family GFC28_3158 PF01597 Glycine cleavage H-protein GFC28_3159 PF01751 Toprim domain GFC28_3160 PF00085 Thioredoxin GFC28_3162 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC28_3163 PF00005 ABC transporter GFC28_3163 PF09383 NIL domain GFC28_3164 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_3165 PF03180 NLPA lipoprotein GFC28_3166 PF02627 Carboxymuconolactone decarboxylase family GFC28_3167 PF00005 ABC transporter GFC28_3168 PF01458 Uncharacterized protein family (UPF0051) GFC28_3169 PF00266 Aminotransferase class-V GFC28_3170 PF01592 NifU-like N terminal domain GFC28_3171 PF01458 Uncharacterized protein family (UPF0051) GFC28_3172 PF01904 Protein of unknown function DUF72 GFC28_3173 PF01925 Sulfite exporter TauE/SafE GFC28_3174 PF02872 5'-nucleotidase, C-terminal domain GFC28_3175 PF08827 Domain of unknown function (DUF1805) GFC28_3176 PF09560 Sporulation protein YunB (Spo_YunB) GFC28_3177 PF01551 Peptidase family M23 GFC28_3178 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GFC28_3178 PF04055 Radical SAM superfamily GFC28_318 PF02586 SOS response associated peptidase (SRAP) GFC28_3180 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GFC28_3181 PF06265 Protein of unknown function (DUF1027) GFC28_3184 PF01934 Protein of unknown function DUF86 GFC28_3186 PF13344 Haloacid dehalogenase-like hydrolase GFC28_3187 PF04608 Phosphatidylglycerophosphatase A GFC28_3189 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GFC28_3189 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFC28_3191 PF00872 Transposase, Mutator family GFC28_3194 PF01695 IstB-like ATP binding protein GFC28_3196 PF01695 IstB-like ATP binding protein GFC28_3197 PF00665 Integrase core domain GFC28_3198 PF00665 Integrase core domain GFC28_32 PF01521 Iron-sulphur cluster biosynthesis GFC28_320 PF07690 Major Facilitator Superfamily GFC28_3204 PF00872 Transposase, Mutator family GFC28_3206 PF01842 ACT domain GFC28_3206 PF00742 Homoserine dehydrogenase GFC28_3206 PF03447 Homoserine dehydrogenase, NAD binding domain GFC28_3207 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_3208 PF00288 GHMP kinases N terminal domain GFC28_3208 PF08544 GHMP kinases C terminal GFC28_3209 PF01106 NifU-like domain GFC28_321 PF03180 NLPA lipoprotein GFC28_3210 PF07315 Protein of unknown function (DUF1462) GFC28_3211 PF13536 Putative multidrug resistance efflux transporter GFC28_3212 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3213 PF07293 Protein of unknown function (DUF1450) GFC28_3215 PF01678 Diaminopimelate epimerase GFC28_3216 PF01521 Iron-sulphur cluster biosynthesis GFC28_3217 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3218 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3219 PF13344 Haloacid dehalogenase-like hydrolase GFC28_3219 PF00293 NUDIX domain GFC28_322 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_3221 PF14068 Putative membrane protein GFC28_3222 PF06725 3D domain GFC28_3223 PF01497 Periplasmic binding protein GFC28_3225 PF02789 Cytosol aminopeptidase family, N-terminal domain GFC28_3225 PF00883 Cytosol aminopeptidase family, catalytic domain GFC28_3226 PF01865 Protein of unknown function DUF47 GFC28_3227 PF01384 Phosphate transporter family GFC28_3228 PF02632 BioY family GFC28_323 PF00005 ABC transporter GFC28_323 PF09383 NIL domain GFC28_3230 PF03600 Citrate transporter GFC28_3232 PF00929 Exonuclease GFC28_3234 PF00080 Copper/zinc superoxide dismutase (SODC) GFC28_3236 PF00155 Aminotransferase class I and II GFC28_3237 PF08958 Domain of unknown function (DUF1871) GFC28_3238 PF01037 Lrp/AsnC ligand binding domain GFC28_3239 PF00155 Aminotransferase class I and II GFC28_324 PF00471 Ribosomal protein L33 GFC28_3241 PF00575 S1 RNA binding domain GFC28_3242 PF04070 Domain of unknown function (DUF378) GFC28_3243 PF00465 Iron-containing alcohol dehydrogenase GFC28_3245 PF00342 Phosphoglucose isomerase GFC28_3246 PF01381 Helix-turn-helix GFC28_3249 PF02254 TrkA-N domain GFC28_3249 PF07885 Ion channel GFC28_325 PF01197 Ribosomal protein L31 GFC28_3250 PF08868 YugN-like family GFC28_3251 PF08141 Small acid-soluble spore protein H family GFC28_3252 PF05225 helix-turn-helix, Psq domain GFC28_3252 PF02810 SEC-C motif GFC28_3253 PF07690 Major Facilitator Superfamily GFC28_3254 PF00583 Acetyltransferase (GNAT) family GFC28_3256 PF03413 Peptidase propeptide and YPEB domain GFC28_3256 PF01447 Thermolysin metallopeptidase, catalytic domain GFC28_3256 PF02868 Thermolysin metallopeptidase, alpha-helical domain GFC28_3256 PF07504 Fungalysin/Thermolysin Propeptide Motif GFC28_3257 PF07478 D-ala D-ala ligase C-terminus GFC28_3257 PF01820 D-ala D-ala ligase N-terminus GFC28_3258 PF02743 Cache domain GFC28_3258 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_3258 PF00672 HAMP domain GFC28_3259 PF02308 MgtC family GFC28_3261 PF00892 EamA-like transporter family GFC28_327 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3280 PF01545 Cation efflux family GFC28_3281 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GFC28_3281 PF00128 Alpha amylase, catalytic domain GFC28_3281 PF02806 Alpha amylase, C-terminal all-beta domain GFC28_3282 PF00483 Nucleotidyl transferase GFC28_3283 PF00483 Nucleotidyl transferase GFC28_3283 PF00132 Bacterial transferase hexapeptide (six repeats) GFC28_3284 PF08323 Starch synthase catalytic domain GFC28_3284 PF00534 Glycosyl transferases group 1 GFC28_3286 PF00343 Carbohydrate phosphorylase GFC28_3288 PF01258 Prokaryotic dksA/traR C4-type zinc finger GFC28_3289 PF01040 UbiA prenyltransferase family GFC28_3290 PF00425 chorismate binding enzyme GFC28_3291 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GFC28_3291 PF16582 Middle domain of thiamine pyrophosphate GFC28_3291 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC28_3292 PF00561 alpha/beta hydrolase fold GFC28_3293 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3294 PF13193 AMP-binding enzyme C-terminal domain GFC28_3294 PF00501 AMP-binding enzyme GFC28_3295 PF07561 Domain of Unknown Function (DUF1540) GFC28_33 PF10827 Protein of unknown function (DUF2552) GFC28_3300 PF02322 Cytochrome bd terminal oxidase subunit II GFC28_3301 PF01654 Cytochrome bd terminal oxidase subunit I GFC28_3302 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GFC28_3302 PF01297 Zinc-uptake complex component A periplasmic GFC28_3303 PF02664 S-Ribosylhomocysteinase (LuxS) GFC28_3304 PF00210 Ferritin-like domain GFC28_3305 PF05105 Bacteriophage holin family GFC28_3307 PF10057 Uncharacterized conserved protein (DUF2294) GFC28_3308 PF00293 NUDIX domain GFC28_3309 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_3310 PF00005 ABC transporter GFC28_3312 PF00326 Prolyl oligopeptidase family GFC28_3313 PF10763 Protein of unknown function (DUF2584) GFC28_3314 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GFC28_3314 PF00361 Proton-conducting membrane transporter GFC28_3315 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GFC28_3316 PF01293 Phosphoenolpyruvate carboxykinase GFC28_3317 PF00438 S-adenosylmethionine synthetase, N-terminal domain GFC28_3317 PF02773 S-adenosylmethionine synthetase, C-terminal domain GFC28_3317 PF02772 S-adenosylmethionine synthetase, central domain GFC28_3318 PF13529 Peptidase_C39 like family GFC28_3319 PF00733 Asparagine synthase GFC28_3319 PF13537 Glutamine amidotransferase domain GFC28_332 PF01883 Iron-sulfur cluster assembly protein GFC28_3320 PF00132 Bacterial transferase hexapeptide (six repeats) GFC28_3321 PF12146 Serine aminopeptidase, S33 GFC28_3322 PF10776 Protein of unknown function (DUF2600) GFC28_3323 PF06962 Putative rRNA methylase GFC28_3324 PF16199 Radical_SAM C-terminal domain GFC28_3324 PF04055 Radical SAM superfamily GFC28_3325 PF10732 Protein of unknown function (DUF2524) GFC28_3327 PF07690 Major Facilitator Superfamily GFC28_3329 PF09334 tRNA synthetases class I (M) GFC28_3329 PF13603 Leucyl-tRNA synthetase, Domain 2 GFC28_3329 PF00133 tRNA synthetases class I (I, L, M and V) GFC28_3329 PF08264 Anticodon-binding domain of tRNA GFC28_3330 PF00581 Rhodanese-like domain GFC28_3334 PF10957 Sporulation protein Cse60 GFC28_3336 PF14667 Polysaccharide biosynthesis C-terminal domain GFC28_3336 PF01943 Polysaccharide biosynthesis protein GFC28_3338 PF00849 RNA pseudouridylate synthase GFC28_3338 PF01479 S4 domain GFC28_3339 PF08220 DeoR-like helix-turn-helix domain GFC28_3340 PF01546 Peptidase family M20/M25/M40 GFC28_3341 PF12832 MFS_1 like family GFC28_3342 PF02834 LigT like Phosphoesterase GFC28_3343 PF03788 LrgA family GFC28_3344 PF04172 LrgB-like family GFC28_3346 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GFC28_3346 PF00128 Alpha amylase, catalytic domain GFC28_3346 PF17999 Pullulanase N1-terminal domain GFC28_3347 PF14165 YtzH-like protein GFC28_3348 PF01636 Phosphotransferase enzyme family GFC28_3349 PF02390 Putative methyltransferase GFC28_335 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3350 PF00753 Metallo-beta-lactamase superfamily GFC28_3352 PF05343 M42 glutamyl aminopeptidase GFC28_3353 PF01931 Protein of unknown function DUF84 GFC28_3354 PF00085 Thioredoxin GFC28_3355 PF07285 Protein of unknown function (DUF1444) GFC28_3356 PF14794 Domain of unknown function (DUF4479) GFC28_3356 PF01588 Putative tRNA binding domain GFC28_3357 PF01580 FtsK/SpoIIIE family GFC28_3357 PF09397 Ftsk gamma domain GFC28_3357 PF17854 FtsK alpha domain GFC28_3357 PF09397 Ftsk gamma domain GFC28_3357 PF01580 FtsK/SpoIIIE family GFC28_3357 PF17854 FtsK alpha domain GFC28_3358 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GFC28_3358 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GFC28_3358 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GFC28_3359 PF08245 Mur ligase middle domain GFC28_3359 PF01225 Mur ligase family, catalytic domain GFC28_3359 PF02875 Mur ligase family, glutamate ligase domain GFC28_336 PF13193 AMP-binding enzyme C-terminal domain GFC28_336 PF00501 AMP-binding enzyme GFC28_3360 PF02073 Thermophilic metalloprotease (M29) GFC28_3363 PF11009 Protein of unknown function (DUF2847) GFC28_3364 PF02491 SHS2 domain inserted in FTSA GFC28_3365 PF01817 Chorismate mutase type II GFC28_3365 PF00793 DAHP synthetase I family GFC28_3366 PF00356 Bacterial regulatory proteins, lacI family GFC28_3367 PF00850 Histone deacetylase domain GFC28_3368 PF00571 CBS domain GFC28_3369 PF00583 Acetyltransferase (GNAT) family GFC28_3370 PF13193 AMP-binding enzyme C-terminal domain GFC28_3370 PF00501 AMP-binding enzyme GFC28_3371 PF00905 Penicillin binding protein transpeptidase domain GFC28_3371 PF00912 Transglycosylase GFC28_3372 PF01479 S4 domain GFC28_3372 PF00579 tRNA synthetases class I (W and Y) GFC28_3373 PF01479 S4 domain GFC28_3373 PF00163 Ribosomal protein S4/S9 N-terminal domain GFC28_3374 PF00990 Diguanylate cyclase, GGDEF domain GFC28_3375 PF13185 GAF domain GFC28_3376 PF02811 PHP domain GFC28_3377 PF06160 Septation ring formation regulator, EzrA GFC28_3378 PF00266 Aminotransferase class-V GFC28_3379 PF02926 THUMP domain GFC28_3379 PF02568 Thiamine biosynthesis protein (ThiI) GFC28_338 PF01979 Amidohydrolase family GFC28_338 PF13382 Adenine deaminase C-terminal domain GFC28_3380 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC28_3381 PF00501 AMP-binding enzyme GFC28_3381 PF13193 AMP-binding enzyme C-terminal domain GFC28_3382 PF01513 ATP-NAD kinase GFC28_3383 PF01343 Peptidase family S49 GFC28_3384 PF06271 RDD family GFC28_3386 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GFC28_3387 PF08534 Redoxin GFC28_3388 PF02384 N-6 DNA Methylase GFC28_3389 PF00871 Acetokinase family GFC28_339 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC28_339 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC28_3390 PF00994 Probable molybdopterin binding domain GFC28_3391 PF00501 AMP-binding enzyme GFC28_3391 PF13193 AMP-binding enzyme C-terminal domain GFC28_3393 PF00764 Arginosuccinate synthase GFC28_3394 PF14698 Argininosuccinate lyase C-terminal GFC28_3394 PF00206 Lyase GFC28_3395 PF00582 Universal stress protein family GFC28_3398 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GFC28_3398 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GFC28_3399 PF00557 Metallopeptidase family M24 GFC28_3399 PF01321 Creatinase/Prolidase N-terminal domain GFC28_340 PF00834 Ribulose-phosphate 3 epimerase family GFC28_3401 PF03061 Thioesterase superfamily GFC28_3401 PF00571 CBS domain GFC28_3401 PF07085 DRTGG domain GFC28_3401 PF00392 Bacterial regulatory proteins, gntR family GFC28_3402 PF14007 YtpI-like protein GFC28_3403 PF02272 DHHA1 domain GFC28_3403 PF01368 DHH family GFC28_3405 PF14034 Sporulation protein YtrH GFC28_3406 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GFC28_3406 PF02811 PHP domain GFC28_3406 PF01336 OB-fold nucleic acid binding domain GFC28_3406 PF07733 Bacterial DNA polymerase III alpha NTPase domain GFC28_3406 PF14579 Helix-hairpin-helix motif GFC28_3407 PF03949 Malic enzyme, NAD binding domain GFC28_3407 PF00390 Malic enzyme, N-terminal domain GFC28_3408 PF00392 Bacterial regulatory proteins, gntR family GFC28_3409 PF17848 Acetyl-coA carboxylase zinc finger domain GFC28_3409 PF01039 Carboxyl transferase domain GFC28_341 PF00294 pfkB family carbohydrate kinase GFC28_3410 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GFC28_3411 PF00365 Phosphofructokinase GFC28_3412 PF00391 PEP-utilising enzyme, mobile domain GFC28_3412 PF02887 Pyruvate kinase, alpha/beta domain GFC28_3412 PF00224 Pyruvate kinase, barrel domain GFC28_3414 PF01594 AI-2E family transporter GFC28_3415 PF04284 Protein of unknown function (DUF441) GFC28_3416 PF00285 Citrate synthase, C-terminal domain GFC28_3417 PF00180 Isocitrate/isopropylmalate dehydrogenase GFC28_3418 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GFC28_3418 PF00056 lactate/malate dehydrogenase, NAD binding domain GFC28_342 PF00005 ABC transporter GFC28_3420 PF00486 Transcriptional regulatory protein, C terminal GFC28_3420 PF00072 Response regulator receiver domain GFC28_3421 PF00989 PAS fold GFC28_3421 PF00512 His Kinase A (phospho-acceptor) domain GFC28_3421 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_3421 PF16736 Single Cache-like GFC28_3422 PF01367 5'-3' exonuclease, C-terminal SAM fold GFC28_3422 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GFC28_3422 PF00476 DNA polymerase family A GFC28_3423 PF06827 Zinc finger found in FPG and IleRS GFC28_3423 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GFC28_3423 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GFC28_3424 PF01121 Dephospho-CoA kinase GFC28_3425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFC28_3425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFC28_3426 PF02675 S-adenosylmethionine decarboxylase GFC28_3428 PF03477 ATP cone domain GFC28_3429 PF07261 Replication initiation and membrane attachment GFC28_343 PF02653 Branched-chain amino acid transport system / permease component GFC28_3430 PF01695 IstB-like ATP binding protein GFC28_3430 PF07319 Primosomal protein DnaI N-terminus GFC28_3431 PF08812 YtxC-like family GFC28_3432 PF03129 Anticodon binding domain GFC28_3432 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC28_3432 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GFC28_3432 PF02824 TGS domain GFC28_3433 PF00707 Translation initiation factor IF-3, C-terminal domain GFC28_3433 PF05198 Translation initiation factor IF-3, N-terminal domain GFC28_3434 PF01632 Ribosomal protein L35 GFC28_3435 PF00453 Ribosomal protein L20 GFC28_3438 PF05343 M42 glutamyl aminopeptidase GFC28_3439 PF13649 Methyltransferase domain GFC28_344 PF02653 Branched-chain amino acid transport system / permease component GFC28_3441 PF14098 Small, acid-soluble spore protein I GFC28_3442 PF08032 RNA 2'-O ribose methyltransferase substrate binding GFC28_3442 PF00588 SpoU rRNA Methylase family GFC28_3444 PF01409 tRNA synthetases class II core domain (F) GFC28_3444 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GFC28_3445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GFC28_3445 PF03484 tRNA synthetase B5 domain GFC28_3445 PF03147 Ferredoxin-fold anticodon binding domain GFC28_3445 PF01588 Putative tRNA binding domain GFC28_3445 PF03483 B3/4 domain GFC28_3446 PF00005 ABC transporter GFC28_3447 PF12679 ABC-2 family transporter protein GFC28_3448 PF01047 MarR family GFC28_3449 PF03176 MMPL family GFC28_345 PF13407 Periplasmic binding protein domain GFC28_3450 PF11858 Domain of unknown function (DUF3378) GFC28_3450 PF01351 Ribonuclease HII GFC28_3451 PF05164 Cell division protein ZapA GFC28_3452 PF02674 Colicin V production protein GFC28_3453 PF02811 PHP domain GFC28_3453 PF14716 Helix-hairpin-helix domain GFC28_3453 PF14791 DNA polymerase beta thumb GFC28_3454 PF00488 MutS domain V GFC28_3454 PF01713 Smr domain GFC28_3455 PF03994 Domain of Unknown Function (DUF350) GFC28_3456 PF00501 AMP-binding enzyme GFC28_3456 PF13193 AMP-binding enzyme C-terminal domain GFC28_3457 PF08359 YsiA-like protein, C-terminal region GFC28_3457 PF00440 Bacterial regulatory proteins, tetR family GFC28_3458 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3459 PF01012 Electron transfer flavoprotein domain GFC28_346 PF00596 Class II Aldolase and Adducin N-terminal domain GFC28_3460 PF01012 Electron transfer flavoprotein domain GFC28_3460 PF00766 Electron transfer flavoprotein FAD-binding domain GFC28_3461 PF00085 Thioredoxin GFC28_3462 PF00296 Luciferase-like monooxygenase GFC28_3463 PF16363 GDP-mannose 4,6 dehydratase GFC28_3465 PF00535 Glycosyl transferase family 2 GFC28_3469 PF08459 UvrC Helix-hairpin-helix N-terminal GFC28_3469 PF02151 UvrB/uvrC motif GFC28_3469 PF01541 GIY-YIG catalytic domain GFC28_347 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC28_347 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC28_3471 PF00696 Amino acid kinase family GFC28_3471 PF13840 ACT domain GFC28_3471 PF01842 ACT domain GFC28_3472 PF10702 Protein of unknown function (DUF2507) GFC28_3473 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GFC28_3474 PF00890 FAD binding domain GFC28_3474 PF02910 Fumarate reductase flavoprotein C-term GFC28_3475 PF13085 2Fe-2S iron-sulfur cluster binding domain GFC28_3475 PF13183 4Fe-4S dicluster domain GFC28_3476 PF00196 Bacterial regulatory proteins, luxR family GFC28_3477 PF01047 MarR family GFC28_3478 PF01177 Asp/Glu/Hydantoin racemase GFC28_3479 PF10646 Sporulation and spore germination GFC28_348 PF06134 L-rhamnose isomerase (RhaA) GFC28_3480 PF01138 3' exoribonuclease family, domain 1 GFC28_3480 PF03725 3' exoribonuclease family, domain 2 GFC28_3481 PF01725 Ham1 family GFC28_3482 PF12850 Calcineurin-like phosphoesterase superfamily domain GFC28_3484 PF01063 Amino-transferase class IV GFC28_3485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GFC28_3485 PF00205 Thiamine pyrophosphate enzyme, central domain GFC28_3485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC28_3486 PF01842 ACT domain GFC28_3486 PF10369 Small subunit of acetolactate synthase GFC28_3487 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GFC28_3487 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GFC28_3488 PF00682 HMGL-like GFC28_3488 PF08502 LeuA allosteric (dimerisation) domain GFC28_3489 PF00180 Isocitrate/isopropylmalate dehydrogenase GFC28_349 PF00455 DeoR C terminal sensor domain GFC28_349 PF08220 DeoR-like helix-turn-helix domain GFC28_3490 PF00330 Aconitase family (aconitate hydratase) GFC28_3491 PF00694 Aconitase C-terminal domain GFC28_3493 PF05698 Bacterial trigger factor protein (TF) C-terminus GFC28_3493 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GFC28_3493 PF05697 Bacterial trigger factor protein (TF) GFC28_3494 PF07724 AAA domain (Cdc48 subfamily) GFC28_3494 PF06689 ClpX C4-type zinc finger GFC28_3494 PF10431 C-terminal, D2-small domain, of ClpB protein GFC28_3495 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_3495 PF05362 Lon protease (S16) C-terminal proteolytic domain GFC28_3496 PF02190 ATP-dependent protease La (LON) substrate-binding domain GFC28_3496 PF00004 ATPase family associated with various cellular activities (AAA) GFC28_3496 PF05362 Lon protease (S16) C-terminal proteolytic domain GFC28_3497 PF01926 50S ribosome-binding GTPase GFC28_3499 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GFC28_3499 PF01488 Shikimate / quinate 5-dehydrogenase GFC28_3499 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GFC28_35 PF00248 Aldo/keto reductase family GFC28_350 PF00248 Aldo/keto reductase family GFC28_3500 PF01578 Cytochrome C assembly protein GFC28_3501 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GFC28_3501 PF03900 Porphobilinogen deaminase, C-terminal domain GFC28_3502 PF02602 Uroporphyrinogen-III synthase HemD GFC28_3503 PF00490 Delta-aminolevulinic acid dehydratase GFC28_3504 PF00202 Aminotransferase class-III GFC28_3505 PF01476 LysM domain GFC28_3505 PF01476 LysM domain GFC28_3508 PF00133 tRNA synthetases class I (I, L, M and V) GFC28_3508 PF10458 Valyl tRNA synthetase tRNA binding arm GFC28_3508 PF08264 Anticodon-binding domain of tRNA GFC28_3509 PF08245 Mur ligase middle domain GFC28_3509 PF02875 Mur ligase family, glutamate ligase domain GFC28_351 PF03006 Haemolysin-III related GFC28_3518 PF00437 Type II/IV secretion system protein GFC28_3519 PF00437 Type II/IV secretion system protein GFC28_352 PF08240 Alcohol dehydrogenase GroES-like domain GFC28_352 PF00107 Zinc-binding dehydrogenase GFC28_3520 PF00482 Type II secretion system (T2SS), protein F GFC28_3521 PF07963 Prokaryotic N-terminal methylation motif GFC28_3521 PF00114 Pilin (bacterial filament) GFC28_3522 PF06750 Bacterial Peptidase A24 N-terminal domain GFC28_3522 PF01478 Type IV leader peptidase family GFC28_3528 PF02545 Maf-like protein GFC28_3529 PF04002 RadC-like JAB domain GFC28_353 PF00491 Arginase family GFC28_3531 PF04085 rod shape-determining protein MreC GFC28_3532 PF04093 rod shape-determining protein MreD GFC28_3533 PF03775 Septum formation inhibitor MinC, C-terminal domain GFC28_3534 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GFC28_3535 PF01551 Peptidase family M23 GFC28_3536 PF02163 Peptidase family M50 GFC28_3537 PF00829 Ribosomal prokaryotic L21 protein GFC28_3538 PF04327 Cysteine protease Prp GFC28_3539 PF01016 Ribosomal L27 protein GFC28_3540 PF14682 Sporulation initiation phospho-transferase B, C-terminal GFC28_3540 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GFC28_3541 PF01926 50S ribosome-binding GTPase GFC28_3541 PF01018 GTP1/OBG GFC28_3541 PF09269 Domain of unknown function (DUF1967) GFC28_3542 PF01842 ACT domain GFC28_3543 PF00800 Prephenate dehydratase GFC28_3543 PF01842 ACT domain GFC28_3544 PF05593 RHS Repeat GFC28_3546 PF05593 RHS Repeat GFC28_3548 PF13411 MerR HTH family regulatory protein GFC28_3549 PF17760 UvrA interaction domain GFC28_3549 PF17755 UvrA DNA-binding domain GFC28_3549 PF00005 ABC transporter GFC28_355 PF12833 Helix-turn-helix domain GFC28_3552 PF02673 Bacitracin resistance protein BacA GFC28_3553 PF08279 HTH domain GFC28_3553 PF02829 3H domain GFC28_3554 PF00266 Aminotransferase class-V GFC28_3555 PF00890 FAD binding domain GFC28_3555 PF02910 Fumarate reductase flavoprotein C-term GFC28_3556 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GFC28_3556 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GFC28_3557 PF02445 Quinolinate synthetase A protein GFC28_3558 PF01476 LysM domain GFC28_356 PF01175 Urocanase Rossmann-like domain GFC28_356 PF17392 Urocanase C-terminal domain GFC28_356 PF17391 Urocanase N-terminal domain GFC28_3560 PF02540 NAD synthase GFC28_3562 PF01709 Transcriptional regulator GFC28_3564 PF08977 Bypass of Forespore C, N terminal GFC28_3564 PF08955 BofC C-terminal domain GFC28_3565 PF01330 RuvA N terminal domain GFC28_3565 PF07499 RuvA, C-terminal domain GFC28_3566 PF05491 RuvB C-terminal winged helix domain GFC28_3566 PF05496 Holliday junction DNA helicase RuvB P-loop domain GFC28_3566 PF17864 RuvB AAA lid domain GFC28_3567 PF11146 Protein of unknown function (DUF2905) GFC28_3568 PF02547 Queuosine biosynthesis protein GFC28_3569 PF01702 Queuine tRNA-ribosyltransferase GFC28_357 PF01979 Amidohydrolase family GFC28_3570 PF02699 Preprotein translocase subunit GFC28_3571 PF12670 Protein of unknown function (DUF3792) GFC28_3572 PF14667 Polysaccharide biosynthesis C-terminal domain GFC28_3572 PF01943 Polysaccharide biosynthesis protein GFC28_3574 PF07549 SecD/SecF GG Motif GFC28_3574 PF02355 Protein export membrane protein GFC28_3575 PF01545 Cation efflux family GFC28_3575 PF16916 Dimerisation domain of Zinc Transporter GFC28_3576 PF01368 DHH family GFC28_3576 PF02272 DHHA1 domain GFC28_3576 PF17768 RecJ OB domain GFC28_3576 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GFC28_3577 PF00156 Phosphoribosyl transferase domain GFC28_3578 PF04607 Region found in RelA / SpoT proteins GFC28_3578 PF13291 ACT domain GFC28_3578 PF02824 TGS domain GFC28_3579 PF02580 D-Tyr-tRNA(Tyr) deacylase GFC28_3580 PF08239 Bacterial SH3 domain GFC28_3580 PF01520 N-acetylmuramoyl-L-alanine amidase GFC28_3582 PF03129 Anticodon binding domain GFC28_3582 PF13393 Histidyl-tRNA synthetase GFC28_3583 PF00152 tRNA synthetases class II (D, K and N) GFC28_3583 PF02938 GAD domain GFC28_3583 PF01336 OB-fold nucleic acid binding domain GFC28_3584 PF00899 ThiF family GFC28_3585 PF00440 Bacterial regulatory proteins, tetR family GFC28_3586 PF12002 MgsA AAA+ ATPase C terminal GFC28_3586 PF16193 AAA C-terminal domain GFC28_3586 PF05496 Holliday junction DNA helicase RuvB P-loop domain GFC28_3588 PF02082 Transcriptional regulator GFC28_3589 PF00266 Aminotransferase class-V GFC28_359 PF01741 Large-conductance mechanosensitive channel, MscL GFC28_3592 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GFC28_3592 PF13538 UvrD-like helicase C-terminal domain GFC28_3592 PF14490 Helix-hairpin-helix containing domain GFC28_3595 PF01594 AI-2E family transporter GFC28_3596 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GFC28_3596 PF02272 DHHA1 domain GFC28_3596 PF01411 tRNA synthetases class II (A) GFC28_3597 PF06135 IreB regulatory phosphoprotein GFC28_3598 PF03652 Holliday junction resolvase GFC28_3599 PF06949 Protein of unknown function (DUF1292) GFC28_36 PF00293 NUDIX domain GFC28_3600 PF02618 YceG-like family GFC28_3604 PF00485 Phosphoribulokinase / Uridine kinase family GFC28_3605 PF01272 Transcription elongation factor, GreA/GreB, C-term GFC28_3605 PF03449 Transcription elongation factor, N-terminal GFC28_3606 PF00905 Penicillin binding protein transpeptidase domain GFC28_3606 PF03717 Penicillin-binding Protein dimerisation domain GFC28_3607 PF07423 Domain of unknown function (DUF1510) GFC28_3608 PF10750 Protein of unknown function (DUF2536) GFC28_3609 PF13649 Methyltransferase domain GFC28_3610 PF01048 Phosphorylase superfamily GFC28_3611 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_3612 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC28_3614 PF07905 Purine catabolism regulatory protein-like family GFC28_3614 PF17853 GGDEF-like domain GFC28_3614 PF13556 PucR C-terminal helix-turn-helix domain GFC28_3615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC28_3615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC28_3616 PF00378 Enoyl-CoA hydratase/isomerase GFC28_3617 PF07690 Major Facilitator Superfamily GFC28_3619 PF00501 AMP-binding enzyme GFC28_3619 PF13193 AMP-binding enzyme C-terminal domain GFC28_3620 PF02803 Thiolase, C-terminal domain GFC28_3620 PF00108 Thiolase, N-terminal domain GFC28_3621 PF07883 Cupin domain GFC28_3622 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC28_3623 PF01494 FAD binding domain GFC28_3625 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC28_3627 PF07883 Cupin domain GFC28_3629 PF04542 Sigma-70 region 2 GFC28_3629 PF04545 Sigma-70, region 4 GFC28_3630 PF00375 Sodium:dicarboxylate symporter family GFC28_3631 PF09335 SNARE associated Golgi protein GFC28_3632 PF02673 Bacitracin resistance protein BacA GFC28_3634 PF13677 Membrane MotB of proton-channel complex MotA/MotB GFC28_3634 PF00691 OmpA family GFC28_3635 PF01618 MotA/TolQ/ExbB proton channel family GFC28_3636 PF01066 CDP-alcohol phosphatidyltransferase GFC28_3637 PF02666 Phosphatidylserine decarboxylase GFC28_3638 PF08970 Sporulation inhibitor A GFC28_364 PF17151 Periplasmic sensor domain GFC28_364 PF00990 Diguanylate cyclase, GGDEF domain GFC28_3640 PF01926 50S ribosome-binding GTPase GFC28_3641 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GFC28_3641 PF08501 Shikimate dehydrogenase substrate binding domain GFC28_3641 PF01488 Shikimate / quinate 5-dehydrogenase GFC28_3642 PF01985 CRS1 / YhbY (CRM) domain GFC28_3643 PF01467 Cytidylyltransferase-like GFC28_3644 PF01966 HD domain GFC28_3646 PF13649 Methyltransferase domain GFC28_3647 PF03807 NADP oxidoreductase coenzyme F420-dependent GFC28_3647 PF14748 Pyrroline-5-carboxylate reductase dimerisation GFC28_3648 PF10531 SLBB domain GFC28_3649 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GFC28_365 PF00392 Bacterial regulatory proteins, gntR family GFC28_365 PF07729 FCD domain GFC28_3650 PF03772 Competence protein GFC28_3650 PF00753 Metallo-beta-lactamase superfamily GFC28_3650 PF13567 Domain of unknown function (DUF4131) GFC28_3651 PF14141 YqzM-like protein GFC28_3652 PF06144 DNA polymerase III, delta subunit GFC28_3653 PF01649 Ribosomal protein S20 GFC28_3654 PF03418 Germination protease GFC28_3655 PF07454 Stage II sporulation protein P (SpoIIP) GFC28_3656 PF12438 Protein of unknown function (DUF3679) GFC28_3657 PF06421 GTP-binding protein LepA C-terminus GFC28_3657 PF00679 Elongation factor G C-terminus GFC28_3657 PF00009 Elongation factor Tu GTP binding domain GFC28_3657 PF03144 Elongation factor Tu domain 2 GFC28_3658 PF04055 Radical SAM superfamily GFC28_3658 PF06969 HemN C-terminal domain GFC28_3659 PF01628 HrcA protein C terminal domain GFC28_366 PF02515 CoA-transferase family III GFC28_3660 PF01025 GrpE GFC28_3661 PF00012 Hsp70 protein GFC28_3662 PF00226 DnaJ domain GFC28_3662 PF01556 DnaJ C terminal domain GFC28_3662 PF00684 DnaJ central domain GFC28_3664 PF04452 RNA methyltransferase GFC28_3665 PF04055 Radical SAM superfamily GFC28_3665 PF01938 TRAM domain GFC28_3665 PF00919 Uncharacterized protein family UPF0004 GFC28_3666 PF01791 DeoC/LacD family aldolase GFC28_3667 PF02690 Na+/Pi-cotransporter GFC28_3668 PF01165 Ribosomal protein S21 GFC28_3669 PF09424 Yqey-like protein GFC28_367 PF00682 HMGL-like GFC28_3670 PF07873 YabP family GFC28_3671 PF06898 Putative stage IV sporulation protein YqfD GFC28_3672 PF02562 PhoH-like protein GFC28_3673 PF02130 Uncharacterized protein family UPF0054 GFC28_3674 PF01219 Prokaryotic diacylglycerol kinase GFC28_3675 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GFC28_3676 PF01926 50S ribosome-binding GTPase GFC28_3676 PF07650 KH domain GFC28_3677 PF14006 YqzL-like protein GFC28_3678 PF11967 Recombination protein O N terminal GFC28_3678 PF02565 Recombination protein O C terminal GFC28_3679 PF00571 CBS domain GFC28_3679 PF08279 HTH domain GFC28_368 PF03480 Bacterial extracellular solute-binding protein, family 7 GFC28_3680 PF03618 Kinase/pyrophosphorylase GFC28_3682 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GFC28_3683 PF10410 DnaB-helicase binding domain of primase GFC28_3683 PF08275 DNA primase catalytic core, N-terminal domain GFC28_3683 PF01807 CHC2 zinc finger GFC28_3684 PF04539 Sigma-70 region 3 GFC28_3684 PF04542 Sigma-70 region 2 GFC28_3684 PF00140 Sigma-70 factor, region 1.2 GFC28_3684 PF04545 Sigma-70, region 4 GFC28_3684 PF03979 Sigma-70 factor, region 1.1 GFC28_3686 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GFC28_3687 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GFC28_3688 PF01784 NIF3 (NGG1p interacting factor 3) GFC28_3689 PF02401 LytB protein GFC28_3691 PF00271 Helicase conserved C-terminal domain GFC28_3691 PF00270 DEAD/DEAH box helicase GFC28_3692 PF01261 Xylose isomerase-like TIM barrel GFC28_3694 PF00005 ABC transporter GFC28_3695 PF00950 ABC 3 transport family GFC28_3696 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GFC28_3697 PF01475 Ferric uptake regulator family GFC28_3699 PF04551 GcpE protein GFC28_370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GFC28_3701 PF12849 PBP superfamily domain GFC28_3702 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_3703 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_3704 PF13538 UvrD-like helicase C-terminal domain GFC28_3705 PF06691 Protein of unknown function (DUF1189) GFC28_3706 PF02743 Cache domain GFC28_3706 PF00672 HAMP domain GFC28_3706 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_3707 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GFC28_3707 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GFC28_3708 PF07690 Major Facilitator Superfamily GFC28_371 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC28_3710 PF00005 ABC transporter GFC28_3711 PF01895 PhoU domain GFC28_3714 PF00483 Nucleotidyl transferase GFC28_3715 PF00471 Ribosomal protein L33 GFC28_3716 PF01812 5-formyltetrahydrofolate cyclo-ligase family GFC28_3720 PF01694 Rhomboid family GFC28_3722 PF03323 Bacillus/Clostridium GerA spore germination protein GFC28_3723 PF06014 Bacterial protein of unknown function (DUF910) GFC28_3724 PF00480 ROK family GFC28_3725 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GFC28_3725 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GFC28_3726 PF00884 Sulfatase GFC28_3727 PF01476 LysM domain GFC28_3727 PF00246 Zinc carboxypeptidase GFC28_3728 PF01910 Thiamine-binding protein GFC28_3729 PF10958 Protein of unknown function (DUF2759) GFC28_373 PF01381 Helix-turn-helix GFC28_3731 PF00753 Metallo-beta-lactamase superfamily GFC28_3733 PF11117 Protein of unknown function (DUF2626) GFC28_3735 PF00437 Type II/IV secretion system protein GFC28_3736 PF00482 Type II secretion system (T2SS), protein F GFC28_3737 PF07963 Prokaryotic N-terminal methylation motif GFC28_3738 PF00114 Pilin (bacterial filament) GFC28_3738 PF07963 Prokaryotic N-terminal methylation motif GFC28_3742 PF01202 Shikimate kinase GFC28_3743 PF14038 YqzE-like protein GFC28_3744 PF11079 Bacterial protein YqhG of unknown function GFC28_3745 PF00176 SNF2 family N-terminal domain GFC28_3745 PF00271 Helicase conserved C-terminal domain GFC28_3746 PF01571 Aminomethyltransferase folate-binding domain GFC28_3746 PF08669 Glycine cleavage T-protein C-terminal barrel domain GFC28_3747 PF02347 Glycine cleavage system P-protein GFC28_3748 PF02347 Glycine cleavage system P-protein GFC28_3749 PF00581 Rhodanese-like domain GFC28_3750 PF03099 Biotin/lipoate A/B protein ligase family GFC28_3752 PF00317 Ribonucleotide reductase, all-alpha domain GFC28_3752 PF02867 Ribonucleotide reductase, barrel domain GFC28_3752 PF03477 ATP cone domain GFC28_3755 PF00704 Glycosyl hydrolases family 18 GFC28_3755 PF00704 Glycosyl hydrolases family 18 GFC28_3755 PF01476 LysM domain GFC28_3755 PF01476 LysM domain GFC28_3757 PF02742 Iron dependent repressor, metal binding and dimerisation domain GFC28_3757 PF01325 Iron dependent repressor, N-terminal DNA binding domain GFC28_3758 PF01734 Patatin-like phospholipase GFC28_3760 PF07136 Protein of unknown function (DUF1385) GFC28_3761 PF11085 Conserved membrane protein YqhR GFC28_3762 PF01220 Dehydroquinase class II GFC28_3763 PF01321 Creatinase/Prolidase N-terminal domain GFC28_3763 PF00557 Metallopeptidase family M24 GFC28_3764 PF01132 Elongation factor P (EF-P) OB domain GFC28_3764 PF08207 Elongation factor P (EF-P) KOW-like domain GFC28_3764 PF09285 Elongation factor P, C-terminal GFC28_3765 PF10942 Protein of unknown function (DUF2619) GFC28_3767 PF09548 Stage III sporulation protein AB (spore_III_AB) GFC28_3768 PF06686 Stage III sporulation protein AC/AD protein family GFC28_3769 PF06686 Stage III sporulation protein AC/AD protein family GFC28_3770 PF09546 Stage III sporulation protein AE (spore_III_AE) GFC28_3771 PF09581 Stage III sporulation protein AF (Spore_III_AF) GFC28_3773 PF12685 SpoIIIAH-like protein GFC28_3774 PF00364 Biotin-requiring enzyme GFC28_3775 PF02785 Biotin carboxylase C-terminal domain GFC28_3775 PF00289 Biotin carboxylase, N-terminal domain GFC28_3775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC28_3776 PF03780 Asp23 family, cell envelope-related function GFC28_3777 PF01029 NusB family GFC28_3778 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GFC28_3778 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GFC28_3779 PF02601 Exonuclease VII, large subunit GFC28_3779 PF13742 OB-fold nucleic acid binding domain GFC28_3780 PF02609 Exonuclease VII small subunit GFC28_3781 PF00348 Polyprenyl synthetase GFC28_3782 PF02779 Transketolase, pyrimidine binding domain GFC28_3782 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GFC28_3782 PF02780 Transketolase, C-terminal domain GFC28_3783 PF01479 S4 domain GFC28_3783 PF01728 FtsJ-like methyltransferase GFC28_3784 PF01316 Arginine repressor, DNA binding domain GFC28_3784 PF02863 Arginine repressor, C-terminal domain GFC28_3785 PF13476 AAA domain GFC28_3786 PF05580 SpoIVB peptidase S55 GFC28_3786 PF17820 PDZ domain GFC28_3787 PF00072 Response regulator receiver domain GFC28_3787 PF08769 Sporulation initiation factor Spo0A C terminal GFC28_3789 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_379 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_3790 PF14174 YycC-like protein GFC28_3791 PF03009 Glycerophosphoryl diester phosphodiesterase family GFC28_3792 PF11118 Protein of unknown function (DUF2627) GFC28_3793 PF02954 Bacterial regulatory protein, Fis family GFC28_3793 PF00989 PAS fold GFC28_3793 PF00158 Sigma-54 interaction domain GFC28_3794 PF01515 Phosphate acetyl/butaryl transferase GFC28_3795 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GFC28_3795 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFC28_3796 PF00871 Acetokinase family GFC28_3797 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_3797 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC28_3798 PF00676 Dehydrogenase E1 component GFC28_3799 PF02780 Transketolase, C-terminal domain GFC28_3799 PF02779 Transketolase, pyrimidine binding domain GFC28_38 PF01944 Stage II sporulation protein M GFC28_380 PF08240 Alcohol dehydrogenase GroES-like domain GFC28_380 PF00107 Zinc-binding dehydrogenase GFC28_3800 PF00364 Biotin-requiring enzyme GFC28_3800 PF02817 e3 binding domain GFC28_3800 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC28_3804 PF01642 Methylmalonyl-CoA mutase GFC28_3805 PF02310 B12 binding domain GFC28_3805 PF01642 Methylmalonyl-CoA mutase GFC28_3807 PF01381 Helix-turn-helix GFC28_381 PF00107 Zinc-binding dehydrogenase GFC28_381 PF08240 Alcohol dehydrogenase GroES-like domain GFC28_382 PF00874 PRD domain GFC28_382 PF03123 CAT RNA binding domain GFC28_383 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_383 PF02378 Phosphotransferase system, EIIC GFC28_385 PF00294 pfkB family carbohydrate kinase GFC28_386 PF04227 Indigoidine synthase A like protein GFC28_39 PF01475 Ferric uptake regulator family GFC28_391 PF13249 Squalene-hopene cyclase N-terminal domain GFC28_391 PF13243 Squalene-hopene cyclase C-terminal domain GFC28_392 PF00248 Aldo/keto reductase family GFC28_393 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_393 PF02378 Phosphotransferase system, EIIC GFC28_394 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC28_394 PF00874 PRD domain GFC28_394 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_394 PF08279 HTH domain GFC28_394 PF05043 Mga helix-turn-helix domain GFC28_395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC28_396 PF01232 Mannitol dehydrogenase Rossmann domain GFC28_396 PF08125 Mannitol dehydrogenase C-terminal domain GFC28_397 PF01026 TatD related DNase GFC28_398 PF04239 Protein of unknown function (DUF421) GFC28_399 PF00920 Dehydratase family GFC28_4 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_40 PF14004 Protein of unknown function (DUF4227) GFC28_402 PF01367 5'-3' exonuclease, C-terminal SAM fold GFC28_402 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GFC28_405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_405 PF00672 HAMP domain GFC28_405 PF02743 Cache domain GFC28_406 PF00171 Aldehyde dehydrogenase family GFC28_407 PF01472 PUA domain GFC28_407 PF00696 Amino acid kinase family GFC28_408 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC28_41 PF02899 Phage integrase, N-terminal SAM-like domain GFC28_41 PF00589 Phage integrase family GFC28_410 PF00155 Aminotransferase class I and II GFC28_410 PF00392 Bacterial regulatory proteins, gntR family GFC28_411 PF00501 AMP-binding enzyme GFC28_411 PF14535 AMP-binding enzyme C-terminal domain GFC28_412 PF05138 Phenylacetic acid catabolic protein GFC28_415 PF01883 Iron-sulfur cluster assembly protein GFC28_417 PF00378 Enoyl-CoA hydratase/isomerase GFC28_418 PF00378 Enoyl-CoA hydratase/isomerase GFC28_42 PF01676 Metalloenzyme superfamily GFC28_420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC28_420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC28_421 PF02803 Thiolase, C-terminal domain GFC28_421 PF00108 Thiolase, N-terminal domain GFC28_422 PF00378 Enoyl-CoA hydratase/isomerase GFC28_423 PF08223 PaaX-like protein C-terminal domain GFC28_423 PF07848 PaaX-like protein GFC28_424 PF00132 Bacterial transferase hexapeptide (six repeats) GFC28_425 PF03060 Nitronate monooxygenase GFC28_427 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GFC28_427 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFC28_428 PF00676 Dehydrogenase E1 component GFC28_429 PF02780 Transketolase, C-terminal domain GFC28_429 PF02779 Transketolase, pyrimidine binding domain GFC28_43 PF01048 Phosphorylase superfamily GFC28_430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC28_430 PF02817 e3 binding domain GFC28_430 PF00364 Biotin-requiring enzyme GFC28_432 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_432 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC28_437 PF05816 Toxic anion resistance protein (TelA) GFC28_438 PF10710 Protein of unknown function (DUF2512) GFC28_44 PF00591 Glycosyl transferase family, a/b domain GFC28_44 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GFC28_44 PF02885 Glycosyl transferase family, helical bundle domain GFC28_441 PF00909 Ammonium Transporter Family GFC28_445 PF01497 Periplasmic binding protein GFC28_446 PF01032 FecCD transport family GFC28_447 PF01032 FecCD transport family GFC28_448 PF00005 ABC transporter GFC28_450 PF03707 Bacterial signalling protein N terminal repeat GFC28_450 PF00563 EAL domain GFC28_450 PF00990 Diguanylate cyclase, GGDEF domain GFC28_451 PF00300 Histidine phosphatase superfamily (branch 1) GFC28_452 PF07664 Ferrous iron transport protein B C terminus GFC28_452 PF17910 FeoB cytosolic helical domain GFC28_452 PF02421 Ferrous iron transport protein B GFC28_452 PF07670 Nucleoside recognition GFC28_453 PF07664 Ferrous iron transport protein B C terminus GFC28_453 PF17910 FeoB cytosolic helical domain GFC28_453 PF02421 Ferrous iron transport protein B GFC28_453 PF07670 Nucleoside recognition GFC28_454 PF17910 FeoB cytosolic helical domain GFC28_454 PF02421 Ferrous iron transport protein B GFC28_454 PF07664 Ferrous iron transport protein B C terminus GFC28_454 PF04023 FeoA domain GFC28_454 PF07670 Nucleoside recognition GFC28_455 PF13193 AMP-binding enzyme C-terminal domain GFC28_455 PF00501 AMP-binding enzyme GFC28_456 PF01872 RibD C-terminal domain GFC28_457 PF01872 RibD C-terminal domain GFC28_46 PF07943 Penicillin-binding protein 5, C-terminal domain GFC28_46 PF00768 D-alanyl-D-alanine carboxypeptidase GFC28_460 PF00376 MerR family regulatory protein GFC28_460 PF09278 MerR, DNA binding GFC28_461 PF13193 AMP-binding enzyme C-terminal domain GFC28_461 PF00501 AMP-binding enzyme GFC28_462 PF02770 Acyl-CoA dehydrogenase, middle domain GFC28_462 PF18158 Adaptive response protein AidB N-terminal domain GFC28_462 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC28_464 PF04439 Streptomycin adenylyltransferase GFC28_468 PF04229 GrpB protein GFC28_468 PF13673 Acetyltransferase (GNAT) domain GFC28_47 PF01740 STAS domain GFC28_472 PF13673 Acetyltransferase (GNAT) domain GFC28_472 PF04229 GrpB protein GFC28_475 PF04134 Protein of unknown function, DUF393 GFC28_477 PF00877 NlpC/P60 family GFC28_477 PF01476 LysM domain GFC28_478 PF03853 YjeF-related protein N-terminus GFC28_478 PF01256 Carbohydrate kinase GFC28_479 PF02682 Carboxyltransferase domain, subdomain C and D GFC28_48 PF13581 Histidine kinase-like ATPase domain GFC28_480 PF02626 Carboxyltransferase domain, subdomain A and B GFC28_481 PF03746 LamB/YcsF family GFC28_482 PF02634 FdhD/NarQ family GFC28_483 PF01568 Molydopterin dinucleotide binding domain GFC28_483 PF00384 Molybdopterin oxidoreductase GFC28_483 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GFC28_483 PF12838 4Fe-4S dicluster domain GFC28_483 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GFC28_485 PF00535 Glycosyl transferase family 2 GFC28_487 PF02110 Hydroxyethylthiazole kinase family GFC28_488 PF08543 Phosphomethylpyrimidine kinase GFC28_489 PF02581 Thiamine monophosphate synthase GFC28_49 PF04545 Sigma-70, region 4 GFC28_49 PF04539 Sigma-70 region 3 GFC28_49 PF04542 Sigma-70 region 2 GFC28_490 PF02416 mttA/Hcf106 family GFC28_491 PF00324 Amino acid permease GFC28_492 PF00854 POT family GFC28_493 PF00565 Staphylococcal nuclease homologue GFC28_494 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_494 PF00512 His Kinase A (phospho-acceptor) domain GFC28_494 PF00989 PAS fold GFC28_496 PF00486 Transcriptional regulatory protein, C terminal GFC28_496 PF00072 Response regulator receiver domain GFC28_497 PF00672 HAMP domain GFC28_497 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_497 PF18698 Histidine kinase sensor domain GFC28_497 PF00512 His Kinase A (phospho-acceptor) domain GFC28_497 PF00989 PAS fold GFC28_498 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_499 PF00270 DEAD/DEAH box helicase GFC28_499 PF09369 Domain of unknown function (DUF1998) GFC28_499 PF00271 Helicase conserved C-terminal domain GFC28_5 PF00005 ABC transporter GFC28_50 PF12164 Stage V sporulation protein AA GFC28_500 PF13482 RNase_H superfamily GFC28_502 PF11122 Inner spore coat protein D GFC28_503 PF06908 YspA SLOG family GFC28_507 PF06908 YspA SLOG family GFC28_508 PF05103 DivIVA protein GFC28_509 PF00990 Diguanylate cyclase, GGDEF domain GFC28_509 PF00563 EAL domain GFC28_509 PF03707 Bacterial signalling protein N terminal repeat GFC28_51 PF13782 Stage V sporulation protein AB GFC28_510 PF01170 Putative RNA methylase family UPF0020 GFC28_510 PF02926 THUMP domain GFC28_515 PF08281 Sigma-70, region 4 GFC28_515 PF04542 Sigma-70 region 2 GFC28_52 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GFC28_522 PF00665 Integrase core domain GFC28_522 PF13276 HTH-like domain GFC28_522 PF13333 Integrase core domain GFC28_523 PF04545 Sigma-70, region 4 GFC28_529 PF13307 Helicase C-terminal domain GFC28_53 PF07451 Stage V sporulation protein AD (SpoVAD) GFC28_530 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GFC28_531 PF05593 RHS Repeat GFC28_535 PF05593 RHS Repeat GFC28_537 PF05593 RHS Repeat GFC28_540 PF05593 RHS Repeat GFC28_543 PF05593 RHS Repeat GFC28_545 PF05593 RHS Repeat GFC28_55 PF14097 Stage V sporulation protein AE1 GFC28_550 PF01593 Flavin containing amine oxidoreductase GFC28_551 PF00115 Cytochrome C and Quinol oxidase polypeptide I GFC28_552 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GFC28_552 PF09125 Cytochrome C oxidase subunit II, transmembrane GFC28_554 PF00156 Phosphoribosyl transferase domain GFC28_555 PF00860 Permease family GFC28_556 PF01709 Transcriptional regulator GFC28_557 PF00195 Chalcone and stilbene synthases, N-terminal domain GFC28_557 PF02797 Chalcone and stilbene synthases, C-terminal domain GFC28_558 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GFC28_559 PF00350 Dynamin family GFC28_56 PF03323 Bacillus/Clostridium GerA spore germination protein GFC28_562 PF00581 Rhodanese-like domain GFC28_563 PF00578 AhpC/TSA family GFC28_565 PF08177 Small acid-soluble spore protein N family GFC28_567 PF03061 Thioesterase superfamily GFC28_569 PF03061 Thioesterase superfamily GFC28_57 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GFC28_57 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GFC28_570 PF01521 Iron-sulphur cluster biosynthesis GFC28_574 PF06968 Biotin and Thiamin Synthesis associated domain GFC28_574 PF04055 Radical SAM superfamily GFC28_575 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_576 PF00202 Aminotransferase class-III GFC28_577 PF01144 Coenzyme A transferase GFC28_578 PF01144 Coenzyme A transferase GFC28_579 PF07687 Peptidase dimerisation domain GFC28_579 PF01546 Peptidase family M20/M25/M40 GFC28_58 PF06207 Protein of unknown function (DUF1002) GFC28_580 PF00583 Acetyltransferase (GNAT) family GFC28_581 PF12544 Lysine-2,3-aminomutase GFC28_582 PF14122 YokU-like protein, putative antitoxin GFC28_583 PF06855 YozE SAM-like fold GFC28_585 PF14162 YozD-like protein GFC28_586 PF10720 Protein of unknown function (DUF2515) GFC28_587 PF00069 Protein kinase domain GFC28_588 PF07070 SpoOM protein GFC28_589 PF14191 YodL-like GFC28_59 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GFC28_593 PF01048 Phosphorylase superfamily GFC28_594 PF02557 D-alanyl-D-alanine carboxypeptidase GFC28_596 PF08241 Methyltransferase domain GFC28_597 PF16916 Dimerisation domain of Zinc Transporter GFC28_597 PF01545 Cation efflux family GFC28_598 PF01544 CorA-like Mg2+ transporter protein GFC28_599 PF00892 EamA-like transporter family GFC28_6 PF06081 Aromatic acid exporter family member 1 GFC28_6 PF11728 Putative aromatic acid exporter C-terminal domain GFC28_60 PF01872 RibD C-terminal domain GFC28_60 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GFC28_602 PF01554 MatE GFC28_603 PF00512 His Kinase A (phospho-acceptor) domain GFC28_603 PF00989 PAS fold GFC28_603 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_604 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GFC28_604 PF01411 tRNA synthetases class II (A) GFC28_604 PF02272 DHHA1 domain GFC28_606 PF07690 Major Facilitator Superfamily GFC28_61 PF00677 Lumazine binding domain GFC28_610 PF13291 ACT domain GFC28_610 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_614 PF03358 NADPH-dependent FMN reductase GFC28_615 PF00440 Bacterial regulatory proteins, tetR family GFC28_617 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC28_617 PF02770 Acyl-CoA dehydrogenase, middle domain GFC28_617 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC28_618 PF00501 AMP-binding enzyme GFC28_618 PF13193 AMP-binding enzyme C-terminal domain GFC28_619 PF00289 Biotin carboxylase, N-terminal domain GFC28_619 PF02785 Biotin carboxylase C-terminal domain GFC28_619 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC28_62 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GFC28_62 PF00925 GTP cyclohydrolase II GFC28_620 PF00364 Biotin-requiring enzyme GFC28_621 PF00682 HMGL-like GFC28_622 PF00378 Enoyl-CoA hydratase/isomerase GFC28_623 PF01039 Carboxyl transferase domain GFC28_626 PF07690 Major Facilitator Superfamily GFC28_629 PF05504 Spore germination B3/ GerAC like, C-terminal GFC28_63 PF00885 6,7-dimethyl-8-ribityllumazine synthase GFC28_630 PF03323 Bacillus/Clostridium GerA spore germination protein GFC28_631 PF03845 Spore germination protein GFC28_632 PF00892 EamA-like transporter family GFC28_633 PF00892 EamA-like transporter family GFC28_635 PF00005 ABC transporter GFC28_64 PF00583 Acetyltransferase (GNAT) family GFC28_640 PF00512 His Kinase A (phospho-acceptor) domain GFC28_640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_641 PF00392 Bacterial regulatory proteins, gntR family GFC28_645 PF00005 ABC transporter GFC28_647 PF01022 Bacterial regulatory protein, arsR family GFC28_648 PF05163 DinB family GFC28_649 PF00403 Heavy-metal-associated domain GFC28_65 PF03745 Domain of unknown function (DUF309) GFC28_651 PF00005 ABC transporter GFC28_651 PF00664 ABC transporter transmembrane region GFC28_652 PF00664 ABC transporter transmembrane region GFC28_652 PF00005 ABC transporter GFC28_653 PF03475 3-alpha domain GFC28_653 PF03473 MOSC domain GFC28_657 PF01925 Sulfite exporter TauE/SafE GFC28_658 PF03951 Glutamine synthetase, beta-Grasp domain GFC28_658 PF00120 Glutamine synthetase, catalytic domain GFC28_659 PF00294 pfkB family carbohydrate kinase GFC28_66 PF02616 Segregation and condensation protein ScpA GFC28_660 PF07690 Major Facilitator Superfamily GFC28_661 PF00356 Bacterial regulatory proteins, lacI family GFC28_662 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GFC28_663 PF01380 SIS domain GFC28_664 PF00753 Metallo-beta-lactamase superfamily GFC28_665 PF13472 GDSL-like Lipase/Acylhydrolase family GFC28_666 PF00005 ABC transporter GFC28_667 PF12679 ABC-2 family transporter protein GFC28_668 PF00293 NUDIX domain GFC28_669 PF00892 EamA-like transporter family GFC28_67 PF04079 Segregation and condensation complex subunit ScpB GFC28_670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_670 PF03466 LysR substrate binding domain GFC28_671 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GFC28_672 PF01022 Bacterial regulatory protein, arsR family GFC28_673 PF11799 impB/mucB/samB family C-terminal domain GFC28_673 PF11798 IMS family HHH motif GFC28_673 PF00817 impB/mucB/samB family GFC28_674 PF02583 Metal-sensitive transcriptional repressor GFC28_675 PF00403 Heavy-metal-associated domain GFC28_676 PF00403 Heavy-metal-associated domain GFC28_677 PF01965 DJ-1/PfpI family GFC28_678 PF00892 EamA-like transporter family GFC28_680 PF07690 Major Facilitator Superfamily GFC28_681 PF13411 MerR HTH family regulatory protein GFC28_682 PF00296 Luciferase-like monooxygenase GFC28_684 PF16870 2-oxoglutarate dehydrogenase C-terminal GFC28_684 PF16078 2-oxoglutarate dehydrogenase N-terminus GFC28_684 PF00676 Dehydrogenase E1 component GFC28_684 PF02779 Transketolase, pyrimidine binding domain GFC28_685 PF02817 e3 binding domain GFC28_685 PF00364 Biotin-requiring enzyme GFC28_685 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC28_686 PF13520 Amino acid permease GFC28_688 PF02146 Sir2 family GFC28_689 PF14602 Hexapeptide repeat of succinyl-transferase GFC28_689 PF12464 Maltose acetyltransferase GFC28_690 PF05036 Sporulation related domain GFC28_690 PF01520 N-acetylmuramoyl-L-alanine amidase GFC28_691 PF03466 LysR substrate binding domain GFC28_691 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_692 PF00892 EamA-like transporter family GFC28_696 PF00005 ABC transporter GFC28_696 PF00664 ABC transporter transmembrane region GFC28_697 PF00664 ABC transporter transmembrane region GFC28_697 PF00005 ABC transporter GFC28_7 PF03734 L,D-transpeptidase catalytic domain GFC28_70 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GFC28_70 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GFC28_700 PF17418 Sporulation delaying protein SdpA GFC28_705 PF00665 Integrase core domain GFC28_705 PF02796 Helix-turn-helix domain of resolvase GFC28_706 PF13333 Integrase core domain GFC28_706 PF00665 Integrase core domain GFC28_706 PF13276 HTH-like domain GFC28_709 PF01979 Amidohydrolase family GFC28_71 PF00768 D-alanyl-D-alanine carboxypeptidase GFC28_71 PF07943 Penicillin-binding protein 5, C-terminal domain GFC28_710 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GFC28_712 PF00367 phosphotransferase system, EIIB GFC28_712 PF02378 Phosphotransferase system, EIIC GFC28_713 PF13580 SIS domain GFC28_714 PF08668 HDOD domain GFC28_714 PF00563 EAL domain GFC28_715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_715 PF00672 HAMP domain GFC28_715 PF12729 Four helix bundle sensory module for signal transduction GFC28_718 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC28_719 PF00005 ABC transporter GFC28_72 PF07670 Nucleoside recognition GFC28_722 PF08240 Alcohol dehydrogenase GroES-like domain GFC28_722 PF00107 Zinc-binding dehydrogenase GFC28_725 PF00106 short chain dehydrogenase GFC28_726 PF01131 DNA topoisomerase GFC28_726 PF01751 Toprim domain GFC28_727 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GFC28_728 PF00881 Nitroreductase family GFC28_729 PF07681 DoxX GFC28_73 PF07670 Nucleoside recognition GFC28_733 PF07995 Glucose / Sorbosone dehydrogenase GFC28_737 PF00293 NUDIX domain GFC28_739 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC28_74 PF00849 RNA pseudouridylate synthase GFC28_74 PF01479 S4 domain GFC28_741 PF03611 PTS system sugar-specific permease component GFC28_742 PF00456 Transketolase, thiamine diphosphate binding domain GFC28_743 PF02780 Transketolase, C-terminal domain GFC28_743 PF02779 Transketolase, pyrimidine binding domain GFC28_745 PF02667 Short chain fatty acid transporter GFC28_746 PF00392 Bacterial regulatory proteins, gntR family GFC28_746 PF00155 Aminotransferase class I and II GFC28_747 PF01810 LysE type translocator GFC28_748 PF01566 Natural resistance-associated macrophage protein GFC28_75 PF00578 AhpC/TSA family GFC28_751 PF00664 ABC transporter transmembrane region GFC28_751 PF00005 ABC transporter GFC28_752 PF00005 ABC transporter GFC28_752 PF00664 ABC transporter transmembrane region GFC28_753 PF00664 ABC transporter transmembrane region GFC28_755 PF08892 YqcI/YcgG family GFC28_756 PF01810 LysE type translocator GFC28_757 PF13411 MerR HTH family regulatory protein GFC28_757 PF07739 TipAS antibiotic-recognition domain GFC28_759 PF01037 Lrp/AsnC ligand binding domain GFC28_76 PF05140 ResB-like family GFC28_761 PF03459 TOBE domain GFC28_761 PF00005 ABC transporter GFC28_762 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_763 PF12727 PBP superfamily domain GFC28_763 PF12728 Helix-turn-helix domain GFC28_765 PF01568 Molydopterin dinucleotide binding domain GFC28_765 PF00384 Molybdopterin oxidoreductase GFC28_765 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GFC28_768 PF00141 Peroxidase GFC28_769 PF07690 Major Facilitator Superfamily GFC28_77 PF01578 Cytochrome C assembly protein GFC28_770 PF00440 Bacterial regulatory proteins, tetR family GFC28_770 PF08360 QacR-like protein, C-terminal region GFC28_771 PF03176 MMPL family GFC28_772 PF00440 Bacterial regulatory proteins, tetR family GFC28_772 PF18665 Tetracyclin repressor-like, C-terminal domain GFC28_776 PF01022 Bacterial regulatory protein, arsR family GFC28_777 PF01758 Sodium Bile acid symporter family GFC28_778 PF01451 Low molecular weight phosphotyrosine protein phosphatase GFC28_78 PF00486 Transcriptional regulatory protein, C terminal GFC28_78 PF00072 Response regulator receiver domain GFC28_785 PF00128 Alpha amylase, catalytic domain GFC28_785 PF02806 Alpha amylase, C-terminal all-beta domain GFC28_785 PF01833 IPT/TIG domain GFC28_785 PF00686 Starch binding domain GFC28_786 PF03575 Peptidase family S51 GFC28_788 PF00583 Acetyltransferase (GNAT) family GFC28_79 PF00989 PAS fold GFC28_79 PF18698 Histidine kinase sensor domain GFC28_79 PF00672 HAMP domain GFC28_79 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_79 PF00512 His Kinase A (phospho-acceptor) domain GFC28_795 PF00092 von Willebrand factor type A domain GFC28_796 PF07728 AAA domain (dynein-related subfamily) GFC28_797 PF02334 Replication terminator protein GFC28_798 PF01842 ACT domain GFC28_798 PF00551 Formyl transferase GFC28_799 PF01625 Peptide methionine sulfoxide reductase GFC28_799 PF01641 SelR domain GFC28_80 PF00512 His Kinase A (phospho-acceptor) domain GFC28_80 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_80 PF00672 HAMP domain GFC28_800 PF00970 Oxidoreductase FAD-binding domain GFC28_800 PF00042 Globin GFC28_800 PF00175 Oxidoreductase NAD-binding domain GFC28_801 PF02082 Transcriptional regulator GFC28_803 PF17284 Spermidine synthase tetramerisation domain GFC28_804 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC28_804 PF02770 Acyl-CoA dehydrogenase, middle domain GFC28_804 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GFC28_807 PF03553 Na+/H+ antiporter family GFC28_808 PF07702 UTRA domain GFC28_808 PF00392 Bacterial regulatory proteins, gntR family GFC28_809 PF16657 Maltogenic Amylase, C-terminal domain GFC28_809 PF00128 Alpha amylase, catalytic domain GFC28_81 PF00072 Response regulator receiver domain GFC28_81 PF00486 Transcriptional regulatory protein, C terminal GFC28_810 PF00367 phosphotransferase system, EIIB GFC28_810 PF02378 Phosphotransferase system, EIIC GFC28_811 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GFC28_812 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GFC28_814 PF00521 DNA gyrase/topoisomerase IV, subunit A GFC28_814 PF03989 DNA gyrase C-terminal domain, beta-propeller GFC28_815 PF00986 DNA gyrase B subunit, carboxyl terminus GFC28_815 PF00204 DNA gyrase B GFC28_815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_815 PF01751 Toprim domain GFC28_816 PF13380 CoA binding domain GFC28_819 PF09323 Domain of unknown function (DUF1980) GFC28_82 PF00664 ABC transporter transmembrane region GFC28_82 PF00005 ABC transporter GFC28_820 PF03773 Predicted permease GFC28_821 PF02492 CobW/HypB/UreG, nucleotide-binding domain GFC28_821 PF07683 Cobalamin synthesis protein cobW C-terminal domain GFC28_822 PF07670 Nucleoside recognition GFC28_83 PF11724 YvbH-like oligomerisation region GFC28_83 PF08000 Bacterial PH domain GFC28_838 PF12822 ECF transporter, substrate-specific component GFC28_839 PF01546 Peptidase family M20/M25/M40 GFC28_839 PF07687 Peptidase dimerisation domain GFC28_84 PF01497 Periplasmic binding protein GFC28_841 PF09997 Predicted membrane protein (DUF2238) GFC28_842 PF02660 Glycerol-3-phosphate acyltransferase GFC28_843 PF17126 RsmF rRNA methyltransferase first C-terminal domain GFC28_843 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GFC28_843 PF01189 16S rRNA methyltransferase RsmB/F GFC28_845 PF13472 GDSL-like Lipase/Acylhydrolase family GFC28_846 PF02630 SCO1/SenC GFC28_847 PF02645 Uncharacterised protein, DegV family COG1307 GFC28_849 PF00585 C-terminal regulatory domain of Threonine dehydratase GFC28_849 PF00291 Pyridoxal-phosphate dependent enzyme GFC28_85 PF01032 FecCD transport family GFC28_850 PF10710 Protein of unknown function (DUF2512) GFC28_851 PF00186 Dihydrofolate reductase GFC28_852 PF00303 Thymidylate synthase GFC28_854 PF00155 Aminotransferase class I and II GFC28_856 PF04445 Putative SAM-dependent methyltransferase GFC28_857 PF06491 Disulphide isomerase GFC28_86 PF00005 ABC transporter GFC28_860 PF08712 Scaffold protein Nfu/NifU N terminal GFC28_860 PF13769 Virulence factor GFC28_861 PF01966 HD domain GFC28_862 PF00255 Glutathione peroxidase GFC28_864 PF01268 Formate--tetrahydrofolate ligase GFC28_865 PF04204 Homoserine O-succinyltransferase GFC28_866 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GFC28_867 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GFC28_868 PF08241 Methyltransferase domain GFC28_869 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GFC28_869 PF12557 Cob(I)alamin adenosyltransferase N terminal GFC28_87 PF03186 CobD/Cbib protein GFC28_870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_871 PF02277 Phosphoribosyltransferase GFC28_872 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GFC28_872 PF07685 CobB/CobQ-like glutamine amidotransferase domain GFC28_873 PF07685 CobB/CobQ-like glutamine amidotransferase domain GFC28_873 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GFC28_874 PF11761 Cobalamin biosynthesis central region GFC28_874 PF11760 Cobalamin synthesis G N-terminal GFC28_874 PF01890 Cobalamin synthesis G C-terminus GFC28_875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_876 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_877 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_878 PF01888 CbiD GFC28_879 PF02570 Precorrin-8X methylmutase GFC28_88 PF00155 Aminotransferase class I and II GFC28_880 PF02571 Precorrin-6x reductase CbiJ/CobK GFC28_881 PF01903 CbiX GFC28_882 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GFC28_882 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC28_883 PF00005 ABC transporter GFC28_885 PF02553 Cobalt transport protein component CbiN GFC28_886 PF01891 Cobalt uptake substrate-specific transmembrane region GFC28_888 PF03737 Aldolase/RraA GFC28_889 PF03109 ABC1 family GFC28_89 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GFC28_893 PF08439 Oligopeptidase F GFC28_893 PF01432 Peptidase family M3 GFC28_894 PF02096 60Kd inner membrane protein GFC28_898 PF02602 Uroporphyrinogen-III synthase HemD GFC28_90 PF02654 Cobalamin-5-phosphate synthase GFC28_900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_900 PF00512 His Kinase A (phospho-acceptor) domain GFC28_900 PF00989 PAS fold GFC28_900 PF08447 PAS fold GFC28_901 PF00557 Metallopeptidase family M24 GFC28_902 PF12706 Beta-lactamase superfamily domain GFC28_903 PF09323 Domain of unknown function (DUF1980) GFC28_904 PF03773 Predicted permease GFC28_905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC28_905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC28_906 PF00294 pfkB family carbohydrate kinase GFC28_907 PF00455 DeoR C terminal sensor domain GFC28_907 PF08220 DeoR-like helix-turn-helix domain GFC28_908 PF01966 HD domain GFC28_909 PF17248 Family of unknown function (DUF5317) GFC28_910 PF04231 Endonuclease I GFC28_911 PF03553 Na+/H+ antiporter family GFC28_912 PF13411 MerR HTH family regulatory protein GFC28_915 PF04397 LytTr DNA-binding domain GFC28_915 PF00072 Response regulator receiver domain GFC28_916 PF06580 Histidine kinase GFC28_916 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_916 PF07694 5TMR of 5TMR-LYT GFC28_917 PF03060 Nitronate monooxygenase GFC28_918 PF00378 Enoyl-CoA hydratase/isomerase GFC28_922 PF00440 Bacterial regulatory proteins, tetR family GFC28_923 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC28_923 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC28_924 PF01261 Xylose isomerase-like TIM barrel GFC28_925 PF00150 Cellulase (glycosyl hydrolase family 5) GFC28_926 PF13472 GDSL-like Lipase/Acylhydrolase family GFC28_928 PF04854 Protein of unknown function, DUF624 GFC28_929 PF00106 short chain dehydrogenase GFC28_93 PF01923 Cobalamin adenosyltransferase GFC28_930 PF03786 D-mannonate dehydratase (UxuA) GFC28_931 PF02614 Glucuronate isomerase GFC28_932 PF07729 FCD domain GFC28_932 PF00392 Bacterial regulatory proteins, gntR family GFC28_934 PF01229 Glycosyl hydrolases family 39 GFC28_935 PF07477 Glycosyl hydrolase family 67 C-terminus GFC28_935 PF03648 Glycosyl hydrolase family 67 N-terminus GFC28_935 PF07488 Glycosyl hydrolase family 67 middle domain GFC28_936 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_937 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_939 PF00331 Glycosyl hydrolase family 10 GFC28_940 PF00331 Glycosyl hydrolase family 10 GFC28_941 PF03512 Glycosyl hydrolase family 52 GFC28_942 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_943 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_944 PF01547 Bacterial extracellular solute-binding protein GFC28_945 PF00072 Response regulator receiver domain GFC28_945 PF12833 Helix-turn-helix domain GFC28_946 PF06580 Histidine kinase GFC28_946 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_946 PF02743 Cache domain GFC28_946 PF00672 HAMP domain GFC28_947 PF00480 ROK family GFC28_948 PF00248 Aldo/keto reductase family GFC28_949 PF01263 Aldose 1-epimerase GFC28_950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC28_950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC28_951 PF02653 Branched-chain amino acid transport system / permease component GFC28_952 PF00005 ABC transporter GFC28_953 PF13407 Periplasmic binding protein domain GFC28_954 PF07385 D-lyxose isomerase GFC28_955 PF11762 L-arabinose isomerase C-terminal domain GFC28_955 PF02610 L-arabinose isomerase GFC28_956 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC28_956 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC28_957 PF00596 Class II Aldolase and Adducin N-terminal domain GFC28_958 PF00392 Bacterial regulatory proteins, gntR family GFC28_959 PF02653 Branched-chain amino acid transport system / permease component GFC28_96 PF08281 Sigma-70, region 4 GFC28_96 PF04542 Sigma-70 region 2 GFC28_960 PF00005 ABC transporter GFC28_961 PF13407 Periplasmic binding protein domain GFC28_962 PF00072 Response regulator receiver domain GFC28_962 PF12833 Helix-turn-helix domain GFC28_963 PF02743 Cache domain GFC28_963 PF00672 HAMP domain GFC28_963 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_963 PF06580 Histidine kinase GFC28_965 PF06445 GyrI-like small molecule binding domain GFC28_965 PF12833 Helix-turn-helix domain GFC28_967 PF00171 Aldehyde dehydrogenase family GFC28_968 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_969 PF12729 Four helix bundle sensory module for signal transduction GFC28_969 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC28_969 PF00672 HAMP domain GFC28_971 PF07293 Protein of unknown function (DUF1450) GFC28_973 PF00005 ABC transporter GFC28_974 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC28_975 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_976 PF00528 Binding-protein-dependent transport system inner membrane component GFC28_977 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC28_978 PF00072 Response regulator receiver domain GFC28_978 PF08664 YcbB domain GFC28_979 PF01810 LysE type translocator GFC28_98 PF02811 PHP domain GFC28_980 PF03301 Tryptophan 2,3-dioxygenase GFC28_981 PF04199 Putative cyclase GFC28_982 PF00266 Aminotransferase class-V GFC28_983 PF17932 Tetracyclin repressor-like, C-terminal domain GFC28_983 PF00440 Bacterial regulatory proteins, tetR family GFC28_984 PF02146 Sir2 family GFC28_986 PF00202 Aminotransferase class-III GFC28_987 PF00171 Aldehyde dehydrogenase family GFC28_988 PF13556 PucR C-terminal helix-turn-helix domain GFC28_988 PF07905 Purine catabolism regulatory protein-like family GFC28_988 PF17853 GGDEF-like domain GFC28_99 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFC28_99 PF01842 ACT domain GFC28_99 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GFC28_990 PF01979 Amidohydrolase family GFC28_991 PF01180 Dihydroorotate dehydrogenase GFC28_992 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GFC28_992 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_992 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GFC28_997 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC28_997 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GFC28_998 PF01493 GXGXG motif GFC28_998 PF04898 Glutamate synthase central domain GFC28_998 PF01645 Conserved region in glutamate synthase GFC28_998 PF00310 Glutamine amidotransferases class-II GFC28_999 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC28_999 PF03466 LysR substrate binding domain