locus-tag class description GFC29_10 PF03608 PTS system enzyme II sorbitol-specific factor GFC29_1001 PF01039 Carboxyl transferase domain GFC29_1002 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1003 PF00682 HMGL-like GFC29_1004 PF00364 Biotin-requiring enzyme GFC29_1005 PF00289 Biotin carboxylase, N-terminal domain GFC29_1005 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC29_1005 PF02785 Biotin carboxylase C-terminal domain GFC29_1006 PF13193 AMP-binding enzyme C-terminal domain GFC29_1006 PF00501 AMP-binding enzyme GFC29_1007 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC29_1007 PF02770 Acyl-CoA dehydrogenase, middle domain GFC29_1007 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC29_1009 PF00440 Bacterial regulatory proteins, tetR family GFC29_1010 PF03358 NADPH-dependent FMN reductase GFC29_1014 PF13291 ACT domain GFC29_1014 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_1018 PF07690 Major Facilitator Superfamily GFC29_1020 PF02272 DHHA1 domain GFC29_1020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GFC29_1020 PF01411 tRNA synthetases class II (A) GFC29_1021 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1021 PF00989 PAS fold GFC29_1021 PF00512 His Kinase A (phospho-acceptor) domain GFC29_1022 PF01554 MatE GFC29_1025 PF00892 EamA-like transporter family GFC29_1026 PF01544 CorA-like Mg2+ transporter protein GFC29_1027 PF01545 Cation efflux family GFC29_1027 PF16916 Dimerisation domain of Zinc Transporter GFC29_1028 PF08241 Methyltransferase domain GFC29_1030 PF02557 D-alanyl-D-alanine carboxypeptidase GFC29_1031 PF01048 Phosphorylase superfamily GFC29_1035 PF14191 YodL-like GFC29_1036 PF07070 SpoOM protein GFC29_1037 PF00069 Protein kinase domain GFC29_1038 PF10720 Protein of unknown function (DUF2515) GFC29_1039 PF14162 YozD-like protein GFC29_1041 PF06855 YozE SAM-like fold GFC29_1042 PF14122 YokU-like protein, putative antitoxin GFC29_1043 PF12544 Lysine-2,3-aminomutase GFC29_1044 PF00583 Acetyltransferase (GNAT) family GFC29_1045 PF07687 Peptidase dimerisation domain GFC29_1045 PF01546 Peptidase family M20/M25/M40 GFC29_1046 PF01144 Coenzyme A transferase GFC29_1047 PF01144 Coenzyme A transferase GFC29_1048 PF00202 Aminotransferase class-III GFC29_1049 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_1050 PF04055 Radical SAM superfamily GFC29_1050 PF06968 Biotin and Thiamin Synthesis associated domain GFC29_1054 PF01521 Iron-sulphur cluster biosynthesis GFC29_1055 PF03061 Thioesterase superfamily GFC29_1057 PF03061 Thioesterase superfamily GFC29_1059 PF08177 Small acid-soluble spore protein N family GFC29_106 PF00781 Diacylglycerol kinase catalytic domain GFC29_1061 PF00578 AhpC/TSA family GFC29_1062 PF00581 Rhodanese-like domain GFC29_1065 PF00350 Dynamin family GFC29_1066 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family GFC29_1067 PF02797 Chalcone and stilbene synthases, C-terminal domain GFC29_1067 PF00195 Chalcone and stilbene synthases, N-terminal domain GFC29_1068 PF01709 Transcriptional regulator GFC29_1069 PF00860 Permease family GFC29_107 PF02913 FAD linked oxidases, C-terminal domain GFC29_107 PF01565 FAD binding domain GFC29_1070 PF00156 Phosphoribosyl transferase domain GFC29_1072 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GFC29_1072 PF09125 Cytochrome C oxidase subunit II, transmembrane GFC29_1073 PF00115 Cytochrome C and Quinol oxidase polypeptide I GFC29_1074 PF01593 Flavin containing amine oxidoreductase GFC29_1079 PF05593 RHS Repeat GFC29_108 PF02754 Cysteine-rich domain GFC29_108 PF13183 4Fe-4S dicluster domain GFC29_1081 PF05593 RHS Repeat GFC29_1084 PF05593 RHS Repeat GFC29_1087 PF05593 RHS Repeat GFC29_1089 PF05593 RHS Repeat GFC29_109 PF02913 FAD linked oxidases, C-terminal domain GFC29_109 PF01565 FAD binding domain GFC29_1093 PF05593 RHS Repeat GFC29_1094 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GFC29_1095 PF13307 Helicase C-terminal domain GFC29_11 PF07663 Sorbitol phosphotransferase enzyme II C-terminus GFC29_11 PF03612 Sorbitol phosphotransferase enzyme II N-terminus GFC29_110 PF01274 Malate synthase GFC29_1101 PF04545 Sigma-70, region 4 GFC29_1102 PF13333 Integrase core domain GFC29_1102 PF13276 HTH-like domain GFC29_1102 PF00665 Integrase core domain GFC29_1109 PF08281 Sigma-70, region 4 GFC29_1109 PF04542 Sigma-70 region 2 GFC29_111 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC29_1114 PF02926 THUMP domain GFC29_1114 PF01170 Putative RNA methylase family UPF0020 GFC29_1115 PF03707 Bacterial signalling protein N terminal repeat GFC29_1115 PF00563 EAL domain GFC29_1115 PF00990 Diguanylate cyclase, GGDEF domain GFC29_1116 PF05103 DivIVA protein GFC29_1117 PF06908 YspA SLOG family GFC29_112 PF01614 Bacterial transcriptional regulator GFC29_112 PF09339 IclR helix-turn-helix domain GFC29_1121 PF06908 YspA SLOG family GFC29_1122 PF11122 Inner spore coat protein D GFC29_1124 PF13482 RNase_H superfamily GFC29_1125 PF09369 Domain of unknown function (DUF1998) GFC29_1125 PF00271 Helicase conserved C-terminal domain GFC29_1125 PF00270 DEAD/DEAH box helicase GFC29_1126 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_1127 PF00672 HAMP domain GFC29_1127 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1127 PF00989 PAS fold GFC29_1127 PF00512 His Kinase A (phospho-acceptor) domain GFC29_1127 PF18698 Histidine kinase sensor domain GFC29_1128 PF00486 Transcriptional regulatory protein, C terminal GFC29_1128 PF00072 Response regulator receiver domain GFC29_113 PF00999 Sodium/hydrogen exchanger family GFC29_1130 PF00989 PAS fold GFC29_1130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1130 PF00512 His Kinase A (phospho-acceptor) domain GFC29_1131 PF00565 Staphylococcal nuclease homologue GFC29_1132 PF00854 POT family GFC29_1133 PF00324 Amino acid permease GFC29_1134 PF02416 mttA/Hcf106 family GFC29_1135 PF02581 Thiamine monophosphate synthase GFC29_1136 PF08543 Phosphomethylpyrimidine kinase GFC29_1137 PF02110 Hydroxyethylthiazole kinase family GFC29_1139 PF00535 Glycosyl transferase family 2 GFC29_114 PF02080 TrkA-C domain GFC29_1141 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GFC29_1141 PF00384 Molybdopterin oxidoreductase GFC29_1141 PF12838 4Fe-4S dicluster domain GFC29_1141 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GFC29_1141 PF01568 Molydopterin dinucleotide binding domain GFC29_1142 PF02634 FdhD/NarQ family GFC29_1143 PF03746 LamB/YcsF family GFC29_1144 PF02626 Carboxyltransferase domain, subdomain A and B GFC29_1145 PF02682 Carboxyltransferase domain, subdomain C and D GFC29_1146 PF03853 YjeF-related protein N-terminus GFC29_1146 PF01256 Carbohydrate kinase GFC29_1147 PF01476 LysM domain GFC29_1147 PF00877 NlpC/P60 family GFC29_1149 PF04134 Protein of unknown function, DUF393 GFC29_115 PF06738 Putative threonine/serine exporter GFC29_1152 PF13673 Acetyltransferase (GNAT) domain GFC29_1152 PF04229 GrpB protein GFC29_1156 PF13673 Acetyltransferase (GNAT) domain GFC29_1156 PF04229 GrpB protein GFC29_1160 PF04439 Streptomycin adenylyltransferase GFC29_1162 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC29_1162 PF18158 Adaptive response protein AidB N-terminal domain GFC29_1162 PF02770 Acyl-CoA dehydrogenase, middle domain GFC29_1163 PF13193 AMP-binding enzyme C-terminal domain GFC29_1163 PF00501 AMP-binding enzyme GFC29_1164 PF09278 MerR, DNA binding GFC29_1164 PF00376 MerR family regulatory protein GFC29_1167 PF01872 RibD C-terminal domain GFC29_1168 PF01872 RibD C-terminal domain GFC29_1169 PF13193 AMP-binding enzyme C-terminal domain GFC29_1169 PF00501 AMP-binding enzyme GFC29_117 PF07687 Peptidase dimerisation domain GFC29_117 PF01546 Peptidase family M20/M25/M40 GFC29_1170 PF04023 FeoA domain GFC29_1170 PF17910 FeoB cytosolic helical domain GFC29_1170 PF07664 Ferrous iron transport protein B C terminus GFC29_1170 PF07670 Nucleoside recognition GFC29_1170 PF02421 Ferrous iron transport protein B GFC29_1171 PF07670 Nucleoside recognition GFC29_1171 PF02421 Ferrous iron transport protein B GFC29_1171 PF17910 FeoB cytosolic helical domain GFC29_1171 PF07664 Ferrous iron transport protein B C terminus GFC29_1172 PF07664 Ferrous iron transport protein B C terminus GFC29_1172 PF02421 Ferrous iron transport protein B GFC29_1172 PF17910 FeoB cytosolic helical domain GFC29_1172 PF07670 Nucleoside recognition GFC29_1173 PF00300 Histidine phosphatase superfamily (branch 1) GFC29_1174 PF00563 EAL domain GFC29_1174 PF03707 Bacterial signalling protein N terminal repeat GFC29_1174 PF00990 Diguanylate cyclase, GGDEF domain GFC29_1176 PF00005 ABC transporter GFC29_1177 PF01032 FecCD transport family GFC29_1178 PF01032 FecCD transport family GFC29_1179 PF01497 Periplasmic binding protein GFC29_1183 PF00909 Ammonium Transporter Family GFC29_1186 PF10710 Protein of unknown function (DUF2512) GFC29_1187 PF05816 Toxic anion resistance protein (TelA) GFC29_119 PF13378 Enolase C-terminal domain-like GFC29_119 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GFC29_1192 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC29_1192 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_1194 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC29_1194 PF00364 Biotin-requiring enzyme GFC29_1194 PF02817 e3 binding domain GFC29_1195 PF02779 Transketolase, pyrimidine binding domain GFC29_1195 PF02780 Transketolase, C-terminal domain GFC29_1196 PF00676 Dehydrogenase E1 component GFC29_1197 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GFC29_1197 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFC29_1199 PF03060 Nitronate monooxygenase GFC29_12 PF03829 PTS system glucitol/sorbitol-specific IIA component GFC29_1200 PF00132 Bacterial transferase hexapeptide (six repeats) GFC29_1201 PF07848 PaaX-like protein GFC29_1201 PF08223 PaaX-like protein C-terminal domain GFC29_1202 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1203 PF02803 Thiolase, C-terminal domain GFC29_1203 PF00108 Thiolase, N-terminal domain GFC29_1204 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC29_1204 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC29_1206 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1207 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1209 PF01883 Iron-sulfur cluster assembly protein GFC29_121 PF00474 Sodium:solute symporter family GFC29_1212 PF05138 Phenylacetic acid catabolic protein GFC29_1213 PF14535 AMP-binding enzyme C-terminal domain GFC29_1213 PF00501 AMP-binding enzyme GFC29_1214 PF00155 Aminotransferase class I and II GFC29_1214 PF00392 Bacterial regulatory proteins, gntR family GFC29_1216 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC29_1217 PF01472 PUA domain GFC29_1217 PF00696 Amino acid kinase family GFC29_1218 PF00171 Aldehyde dehydrogenase family GFC29_1219 PF00672 HAMP domain GFC29_1219 PF02743 Cache domain GFC29_1219 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_122 PF04341 Protein of unknown function, DUF485 GFC29_1222 PF01367 5'-3' exonuclease, C-terminal SAM fold GFC29_1222 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GFC29_1225 PF00920 Dehydratase family GFC29_1226 PF04239 Protein of unknown function (DUF421) GFC29_1227 PF01026 TatD related DNase GFC29_1228 PF08125 Mannitol dehydrogenase C-terminal domain GFC29_1228 PF01232 Mannitol dehydrogenase Rossmann domain GFC29_1229 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC29_123 PF13520 Amino acid permease GFC29_1230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_1230 PF00874 PRD domain GFC29_1230 PF05043 Mga helix-turn-helix domain GFC29_1230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC29_1230 PF08279 HTH domain GFC29_1231 PF02378 Phosphotransferase system, EIIC GFC29_1231 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_1232 PF00248 Aldo/keto reductase family GFC29_1233 PF13243 Squalene-hopene cyclase C-terminal domain GFC29_1233 PF13249 Squalene-hopene cyclase N-terminal domain GFC29_1238 PF04227 Indigoidine synthase A like protein GFC29_1239 PF00294 pfkB family carbohydrate kinase GFC29_124 PF00210 Ferritin-like domain GFC29_1241 PF02378 Phosphotransferase system, EIIC GFC29_1241 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_1242 PF00874 PRD domain GFC29_1242 PF03123 CAT RNA binding domain GFC29_1243 PF08240 Alcohol dehydrogenase GroES-like domain GFC29_1243 PF00107 Zinc-binding dehydrogenase GFC29_1244 PF00107 Zinc-binding dehydrogenase GFC29_1244 PF08240 Alcohol dehydrogenase GroES-like domain GFC29_1245 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_125 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC29_1251 PF01381 Helix-turn-helix GFC29_1253 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC29_1254 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GFC29_1256 PF03480 Bacterial extracellular solute-binding protein, family 7 GFC29_1257 PF00682 HMGL-like GFC29_1258 PF02515 CoA-transferase family III GFC29_1259 PF00392 Bacterial regulatory proteins, gntR family GFC29_1259 PF07729 FCD domain GFC29_126 PF00356 Bacterial regulatory proteins, lacI family GFC29_1260 PF00990 Diguanylate cyclase, GGDEF domain GFC29_1260 PF17151 Periplasmic sensor domain GFC29_1265 PF01741 Large-conductance mechanosensitive channel, MscL GFC29_1267 PF01979 Amidohydrolase family GFC29_1268 PF01175 Urocanase Rossmann-like domain GFC29_1268 PF17392 Urocanase C-terminal domain GFC29_1268 PF17391 Urocanase N-terminal domain GFC29_1269 PF12833 Helix-turn-helix domain GFC29_1271 PF00491 Arginase family GFC29_1272 PF00107 Zinc-binding dehydrogenase GFC29_1272 PF08240 Alcohol dehydrogenase GroES-like domain GFC29_1273 PF03006 Haemolysin-III related GFC29_1274 PF00248 Aldo/keto reductase family GFC29_1275 PF00455 DeoR C terminal sensor domain GFC29_1275 PF08220 DeoR-like helix-turn-helix domain GFC29_1276 PF06134 L-rhamnose isomerase (RhaA) GFC29_1277 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC29_1277 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC29_1278 PF00596 Class II Aldolase and Adducin N-terminal domain GFC29_1279 PF13407 Periplasmic binding protein domain GFC29_128 PF13416 Bacterial extracellular solute-binding protein GFC29_1280 PF02653 Branched-chain amino acid transport system / permease component GFC29_1281 PF02653 Branched-chain amino acid transport system / permease component GFC29_1282 PF00005 ABC transporter GFC29_1283 PF00294 pfkB family carbohydrate kinase GFC29_1284 PF00834 Ribulose-phosphate 3 epimerase family GFC29_1285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC29_1285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC29_1286 PF01979 Amidohydrolase family GFC29_1286 PF13382 Adenine deaminase C-terminal domain GFC29_1288 PF00501 AMP-binding enzyme GFC29_1288 PF13193 AMP-binding enzyme C-terminal domain GFC29_1289 PF00378 Enoyl-CoA hydratase/isomerase GFC29_129 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_1292 PF01883 Iron-sulfur cluster assembly protein GFC29_1297 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1299 PF01197 Ribosomal protein L31 GFC29_13 PF04198 Putative sugar-binding domain GFC29_130 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_1300 PF00471 Ribosomal protein L33 GFC29_1301 PF00005 ABC transporter GFC29_1301 PF09383 NIL domain GFC29_1302 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_1303 PF03180 NLPA lipoprotein GFC29_1304 PF07690 Major Facilitator Superfamily GFC29_1306 PF02586 SOS response associated peptidase (SRAP) GFC29_1309 PF00005 ABC transporter GFC29_1310 PF00665 Integrase core domain GFC29_1310 PF13333 Integrase core domain GFC29_1310 PF13276 HTH-like domain GFC29_1313 PF00534 Glycosyl transferases group 1 GFC29_1313 PF13439 Glycosyltransferase Family 4 GFC29_1314 PF01569 PAP2 superfamily GFC29_1318 PF13333 Integrase core domain GFC29_1318 PF00665 Integrase core domain GFC29_1318 PF13276 HTH-like domain GFC29_132 PF07690 Major Facilitator Superfamily GFC29_1320 PF01695 IstB-like ATP binding protein GFC29_1321 PF07690 Major Facilitator Superfamily GFC29_1321 PF00083 Sugar (and other) transporter GFC29_1322 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1323 PF13193 AMP-binding enzyme C-terminal domain GFC29_1323 PF00501 AMP-binding enzyme GFC29_1324 PF00111 2Fe-2S iron-sulfur cluster binding domain GFC29_1324 PF01799 [2Fe-2S] binding domain GFC29_1325 PF00941 FAD binding domain in molybdopterin dehydrogenase GFC29_1325 PF03450 CO dehydrogenase flavoprotein C-terminal domain GFC29_1327 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GFC29_1327 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GFC29_1329 PF02625 XdhC and CoxI family GFC29_1329 PF13478 XdhC Rossmann domain GFC29_133 PF13823 Alcohol dehydrogenase GroES-associated GFC29_133 PF08240 Alcohol dehydrogenase GroES-like domain GFC29_133 PF00107 Zinc-binding dehydrogenase GFC29_1330 PF10114 Sensory domain found in PocR GFC29_1330 PF12833 Helix-turn-helix domain GFC29_1339 PF00270 DEAD/DEAH box helicase GFC29_1339 PF08494 DEAD/H associated GFC29_1339 PF00271 Helicase conserved C-terminal domain GFC29_1345 PF04962 KduI/IolB family GFC29_1346 PF01116 Fructose-bisphosphate aldolase class-II GFC29_1347 PF01261 Xylose isomerase-like TIM barrel GFC29_1348 PF00205 Thiamine pyrophosphate enzyme, central domain GFC29_1348 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC29_1348 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GFC29_1349 PF00171 Aldehyde dehydrogenase family GFC29_1350 PF00294 pfkB family carbohydrate kinase GFC29_1351 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC29_1351 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC29_1352 PF00356 Bacterial regulatory proteins, lacI family GFC29_1353 PF13407 Periplasmic binding protein domain GFC29_1354 PF02653 Branched-chain amino acid transport system / permease component GFC29_1355 PF00005 ABC transporter GFC29_1356 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC29_1356 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC29_1358 PF13520 Amino acid permease GFC29_1364 PF00072 Response regulator receiver domain GFC29_1365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1365 PF17203 Single cache domain 3 GFC29_1365 PF00989 PAS fold GFC29_1365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GFC29_1366 PF01970 Tripartite tricarboxylate transporter TctA family GFC29_1368 PF03401 Tripartite tricarboxylate transporter family receptor GFC29_1369 PF00245 Alkaline phosphatase GFC29_1370 PF00465 Iron-containing alcohol dehydrogenase GFC29_1371 PF00753 Metallo-beta-lactamase superfamily GFC29_1372 PF00989 PAS fold GFC29_1372 PF02954 Bacterial regulatory protein, Fis family GFC29_1372 PF00158 Sigma-54 interaction domain GFC29_1377 PF00872 Transposase, Mutator family GFC29_138 PF13426 PAS domain GFC29_138 PF13188 PAS domain GFC29_138 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_138 PF00512 His Kinase A (phospho-acceptor) domain GFC29_138 PF00989 PAS fold GFC29_1380 PF02661 Fic/DOC family GFC29_1384 PF01695 IstB-like ATP binding protein GFC29_1385 PF00665 Integrase core domain GFC29_1387 PF00293 NUDIX domain GFC29_1389 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_1389 PF03466 LysR substrate binding domain GFC29_139 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GFC29_139 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GFC29_1390 PF07690 Major Facilitator Superfamily GFC29_1392 PF02080 TrkA-C domain GFC29_1392 PF02254 TrkA-N domain GFC29_1392 PF00999 Sodium/hydrogen exchanger family GFC29_1395 PF10086 YhfC intramembrane metalloprotease GFC29_1396 PF13630 SdpI/YhfL protein family GFC29_1396 PF07853 Protein of unknown function (DUF1648) GFC29_1397 PF01022 Bacterial regulatory protein, arsR family GFC29_1398 PF01638 HxlR-like helix-turn-helix GFC29_1399 PF02073 Thermophilic metalloprotease (M29) GFC29_14 PF00676 Dehydrogenase E1 component GFC29_1401 PF00313 'Cold-shock' DNA-binding domain GFC29_1402 PF01593 Flavin containing amine oxidoreductase GFC29_141 PF02653 Branched-chain amino acid transport system / permease component GFC29_1416 PF03707 Bacterial signalling protein N terminal repeat GFC29_1416 PF00990 Diguanylate cyclase, GGDEF domain GFC29_1416 PF00563 EAL domain GFC29_1417 PF01590 GAF domain GFC29_1417 PF00563 EAL domain GFC29_1417 PF00360 Phytochrome region GFC29_1417 PF00990 Diguanylate cyclase, GGDEF domain GFC29_1418 PF00990 Diguanylate cyclase, GGDEF domain GFC29_1418 PF05230 MASE2 domain GFC29_142 PF00005 ABC transporter GFC29_1420 PF00011 Hsp20/alpha crystallin family GFC29_1422 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GFC29_1422 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GFC29_1423 PF16363 GDP-mannose 4,6 dehydratase GFC29_1424 PF00288 GHMP kinases N terminal domain GFC29_1424 PF10509 Galactokinase galactose-binding signature GFC29_1424 PF08544 GHMP kinases C terminal GFC29_1425 PF12787 EcsC protein family GFC29_1426 PF16874 Glycosyl hydrolase family 36 C-terminal domain GFC29_1426 PF16875 Glycosyl hydrolase family 36 N-terminal domain GFC29_1427 PF04309 Glycerol-3-phosphate responsive antiterminator GFC29_1429 PF00512 His Kinase A (phospho-acceptor) domain GFC29_1429 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1429 PF18719 ArlS sensor domain GFC29_143 PF13407 Periplasmic binding protein domain GFC29_1430 PF00486 Transcriptional regulatory protein, C terminal GFC29_1430 PF00072 Response regulator receiver domain GFC29_1433 PF17334 Minor curli fiber component A GFC29_1434 PF14179 YppG-like protein GFC29_1438 PF03838 Recombination protein U GFC29_1439 PF00912 Transglycosylase GFC29_1439 PF00905 Penicillin binding protein transpeptidase domain GFC29_144 PF01008 Initiation factor 2 subunit family GFC29_1441 PF10576 Iron-sulfur binding domain of endonuclease III GFC29_1441 PF00633 Helix-hairpin-helix motif GFC29_1441 PF00730 HhH-GPD superfamily base excision DNA repair protein GFC29_1442 PF07261 Replication initiation and membrane attachment GFC29_1443 PF01336 OB-fold nucleic acid binding domain GFC29_1443 PF00152 tRNA synthetases class II (D, K and N) GFC29_1444 PF00155 Aminotransferase class I and II GFC29_1445 PF17881 Domain of unknown function (DUF5590) GFC29_1445 PF03413 Peptidase propeptide and YPEB domain GFC29_1446 PF14084 Protein of unknown function (DUF4264) GFC29_1447 PF00929 Exonuclease GFC29_1447 PF04851 Type III restriction enzyme, res subunit GFC29_1447 PF13307 Helicase C-terminal domain GFC29_1448 PF02261 Aspartate decarboxylase GFC29_1449 PF02569 Pantoate-beta-alanine ligase GFC29_145 PF01636 Phosphotransferase enzyme family GFC29_1450 PF02548 Ketopantoate hydroxymethyltransferase GFC29_1451 PF02237 Biotin protein ligase C terminal domain GFC29_1451 PF03099 Biotin/lipoate A/B protein ligase family GFC29_1451 PF08279 HTH domain GFC29_1452 PF12627 Probable RNA and SrmB- binding site of polymerase A GFC29_1452 PF13735 tRNA nucleotidyltransferase domain 2 putative GFC29_1452 PF01743 Poly A polymerase head domain GFC29_1453 PF00534 Glycosyl transferases group 1 GFC29_1453 PF13439 Glycosyltransferase Family 4 GFC29_1454 PF02585 GlcNAc-PI de-N-acetylase GFC29_1455 PF02142 MGS-like domain GFC29_1456 PF05173 Dihydrodipicolinate reductase, C-terminus GFC29_1456 PF01113 Dihydrodipicolinate reductase, N-terminus GFC29_1457 PF03819 MazG nucleotide pyrophosphohydrolase domain GFC29_1458 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC29_1458 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC29_1459 PF09577 Sporulation protein YpjB (SpoYpjB) GFC29_146 PF00795 Carbon-nitrogen hydrolase GFC29_1460 PF07187 Protein of unknown function (DUF1405) GFC29_1461 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GFC29_1461 PF00032 Cytochrome b(C-terminal)/b6/petD GFC29_1462 PF00033 Cytochrome b/b6/petB GFC29_1463 PF00355 Rieske [2Fe-2S] domain GFC29_1464 PF10673 Protein of unknown function (DUF2487) GFC29_1465 PF08864 UPF0302 domain GFC29_1465 PF08858 IDEAL domain GFC29_1468 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GFC29_1469 PF02153 Prephenate dehydrogenase GFC29_1469 PF01842 ACT domain GFC29_147 PF00155 Aminotransferase class I and II GFC29_1470 PF00155 Aminotransferase class I and II GFC29_1471 PF00290 Tryptophan synthase alpha chain GFC29_1472 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_1473 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GFC29_1474 PF00218 Indole-3-glycerol phosphate synthase GFC29_1475 PF00591 Glycosyl transferase family, a/b domain GFC29_1475 PF02885 Glycosyl transferase family, helical bundle domain GFC29_1476 PF04715 Anthranilate synthase component I, N terminal region GFC29_1476 PF00425 chorismate binding enzyme GFC29_1477 PF07736 Chorismate mutase type I GFC29_1478 PF01761 3-dehydroquinate synthase GFC29_1479 PF01264 Chorismate synthase GFC29_148 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain GFC29_148 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain GFC29_1480 PF01739 CheR methyltransferase, SAM binding domain GFC29_1480 PF03705 CheR methyltransferase, all-alpha domain GFC29_1481 PF00334 Nucleoside diphosphate kinase GFC29_1482 PF00348 Polyprenyl synthetase GFC29_1483 PF01209 ubiE/COQ5 methyltransferase family GFC29_1484 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 GFC29_1485 PF02081 Tryptophan RNA-binding attenuator protein GFC29_1486 PF01227 GTP cyclohydrolase I GFC29_1487 PF00216 Bacterial DNA-binding protein GFC29_1488 PF09547 Stage IV sporulation protein A (spore_IV_A) GFC29_1491 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GFC29_1491 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GFC29_1492 PF01926 50S ribosome-binding GTPase GFC29_1492 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GFC29_1495 PF14140 YpzI-like protein GFC29_1496 PF01070 FMN-dependent dehydrogenase GFC29_1497 PF00575 S1 RNA binding domain GFC29_1498 PF01553 Acyltransferase GFC29_1499 PF02224 Cytidylate kinase GFC29_15 PF00364 Biotin-requiring enzyme GFC29_15 PF02779 Transketolase, pyrimidine binding domain GFC29_15 PF02780 Transketolase, C-terminal domain GFC29_150 PF00596 Class II Aldolase and Adducin N-terminal domain GFC29_1501 PF07238 PilZ domain GFC29_1501 PF12945 Flagellar protein YcgR GFC29_1502 PF14620 YpeB sporulation GFC29_1502 PF03413 Peptidase propeptide and YPEB domain GFC29_1503 PF07486 Cell Wall Hydrolase GFC29_1503 PF01471 Putative peptidoglycan binding domain GFC29_1504 PF13367 PrsW family intramembrane metalloprotease GFC29_1505 PF00873 AcrB/AcrD/AcrF family GFC29_1506 PF00440 Bacterial regulatory proteins, tetR family GFC29_1509 PF08810 Kinase associated protein B GFC29_151 PF03079 ARD/ARD' family GFC29_1510 PF00710 Asparaginase, N-terminal GFC29_1510 PF17763 Glutaminase/Asparaginase C-terminal domain GFC29_1512 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GFC29_1512 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFC29_1513 PF05389 Negative regulator of genetic competence (MecA) GFC29_1514 PF00149 Calcineurin-like phosphoesterase GFC29_1516 PF11007 Spore coat associated protein JA (CotJA) GFC29_1517 PF12652 CotJB protein GFC29_1518 PF05067 Manganese containing catalase GFC29_152 PF01047 MarR family GFC29_1521 PF02517 CPBP intramembrane metalloprotease GFC29_1522 PF00270 DEAD/DEAH box helicase GFC29_1522 PF00271 Helicase conserved C-terminal domain GFC29_1525 PF00719 Inorganic pyrophosphatase GFC29_1526 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GFC29_1526 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFC29_1526 PF01842 ACT domain GFC29_1527 PF02811 PHP domain GFC29_1529 PF08281 Sigma-70, region 4 GFC29_1529 PF04542 Sigma-70 region 2 GFC29_153 PF13520 Amino acid permease GFC29_1532 PF01923 Cobalamin adenosyltransferase GFC29_1535 PF02654 Cobalamin-5-phosphate synthase GFC29_1536 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GFC29_1537 PF00155 Aminotransferase class I and II GFC29_1538 PF03186 CobD/Cbib protein GFC29_1539 PF00005 ABC transporter GFC29_1540 PF01032 FecCD transport family GFC29_1541 PF01497 Periplasmic binding protein GFC29_1542 PF11724 YvbH-like oligomerisation region GFC29_1542 PF08000 Bacterial PH domain GFC29_1543 PF00005 ABC transporter GFC29_1543 PF00664 ABC transporter transmembrane region GFC29_1544 PF00072 Response regulator receiver domain GFC29_1544 PF00486 Transcriptional regulatory protein, C terminal GFC29_1545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1545 PF00512 His Kinase A (phospho-acceptor) domain GFC29_1545 PF00672 HAMP domain GFC29_1546 PF00989 PAS fold GFC29_1546 PF00512 His Kinase A (phospho-acceptor) domain GFC29_1546 PF18698 Histidine kinase sensor domain GFC29_1546 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_1546 PF00672 HAMP domain GFC29_1547 PF00072 Response regulator receiver domain GFC29_1547 PF00486 Transcriptional regulatory protein, C terminal GFC29_1548 PF01578 Cytochrome C assembly protein GFC29_1549 PF05140 ResB-like family GFC29_155 PF00005 ABC transporter GFC29_1550 PF00578 AhpC/TSA family GFC29_1551 PF01479 S4 domain GFC29_1551 PF00849 RNA pseudouridylate synthase GFC29_1552 PF07670 Nucleoside recognition GFC29_1553 PF07670 Nucleoside recognition GFC29_1554 PF00768 D-alanyl-D-alanine carboxypeptidase GFC29_1554 PF07943 Penicillin-binding protein 5, C-terminal domain GFC29_1555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GFC29_1555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GFC29_1558 PF04079 Segregation and condensation complex subunit ScpB GFC29_1559 PF02616 Segregation and condensation protein ScpA GFC29_1560 PF03745 Domain of unknown function (DUF309) GFC29_1561 PF00583 Acetyltransferase (GNAT) family GFC29_1562 PF00885 6,7-dimethyl-8-ribityllumazine synthase GFC29_1563 PF00925 GTP cyclohydrolase II GFC29_1563 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GFC29_1564 PF00677 Lumazine binding domain GFC29_1565 PF01872 RibD C-terminal domain GFC29_1565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GFC29_1566 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GFC29_1567 PF06207 Protein of unknown function (DUF1002) GFC29_1568 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GFC29_1568 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GFC29_1569 PF03323 Bacillus/Clostridium GerA spore germination protein GFC29_157 PF00440 Bacterial regulatory proteins, tetR family GFC29_1570 PF14097 Stage V sporulation protein AE1 GFC29_1572 PF07451 Stage V sporulation protein AD (SpoVAD) GFC29_1573 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GFC29_1574 PF13782 Stage V sporulation protein AB GFC29_1575 PF12164 Stage V sporulation protein AA GFC29_1576 PF04545 Sigma-70, region 4 GFC29_1576 PF04539 Sigma-70 region 3 GFC29_1576 PF04542 Sigma-70 region 2 GFC29_1577 PF13581 Histidine kinase-like ATPase domain GFC29_1578 PF01740 STAS domain GFC29_1579 PF00768 D-alanyl-D-alanine carboxypeptidase GFC29_1579 PF07943 Penicillin-binding protein 5, C-terminal domain GFC29_158 PF02653 Branched-chain amino acid transport system / permease component GFC29_1581 PF02885 Glycosyl transferase family, helical bundle domain GFC29_1581 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GFC29_1581 PF00591 Glycosyl transferase family, a/b domain GFC29_1582 PF01048 Phosphorylase superfamily GFC29_1583 PF01676 Metalloenzyme superfamily GFC29_1584 PF00589 Phage integrase family GFC29_1584 PF02899 Phage integrase, N-terminal SAM-like domain GFC29_1585 PF14004 Protein of unknown function (DUF4227) GFC29_1586 PF01475 Ferric uptake regulator family GFC29_1587 PF01944 Stage II sporulation protein M GFC29_1589 PF00293 NUDIX domain GFC29_1590 PF00248 Aldo/keto reductase family GFC29_1592 PF10827 Protein of unknown function (DUF2552) GFC29_1593 PF01521 Iron-sulphur cluster biosynthesis GFC29_1598 PF00106 short chain dehydrogenase GFC29_1599 PF00753 Metallo-beta-lactamase superfamily GFC29_16 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC29_16 PF00364 Biotin-requiring enzyme GFC29_16 PF02817 e3 binding domain GFC29_160 PF12399 Branched-chain amino acid ATP-binding cassette transporter GFC29_160 PF00005 ABC transporter GFC29_1600 PF03807 NADP oxidoreductase coenzyme F420-dependent GFC29_1600 PF14748 Pyrroline-5-carboxylate reductase dimerisation GFC29_1601 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GFC29_1603 PF12706 Beta-lactamase superfamily domain GFC29_1603 PF00753 Metallo-beta-lactamase superfamily GFC29_1604 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GFC29_1604 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GFC29_1605 PF04199 Putative cyclase GFC29_1608 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GFC29_1608 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GFC29_161 PF00005 ABC transporter GFC29_1611 PF00893 Small Multidrug Resistance protein GFC29_1612 PF01584 CheW-like domain GFC29_1613 PF07687 Peptidase dimerisation domain GFC29_1613 PF01546 Peptidase family M20/M25/M40 GFC29_1615 PF01039 Carboxyl transferase domain GFC29_1618 PF03734 L,D-transpeptidase catalytic domain GFC29_1619 PF06081 Aromatic acid exporter family member 1 GFC29_1619 PF11728 Putative aromatic acid exporter C-terminal domain GFC29_1620 PF00005 ABC transporter GFC29_1621 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_1622 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC29_1623 PF06491 Disulphide isomerase GFC29_1626 PF01381 Helix-turn-helix GFC29_1628 PF01642 Methylmalonyl-CoA mutase GFC29_1628 PF02310 B12 binding domain GFC29_1629 PF01642 Methylmalonyl-CoA mutase GFC29_1633 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC29_1633 PF00364 Biotin-requiring enzyme GFC29_1633 PF02817 e3 binding domain GFC29_1634 PF02779 Transketolase, pyrimidine binding domain GFC29_1634 PF02780 Transketolase, C-terminal domain GFC29_1635 PF00676 Dehydrogenase E1 component GFC29_1636 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC29_1636 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_1637 PF00871 Acetokinase family GFC29_1638 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GFC29_1638 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GFC29_1639 PF01515 Phosphate acetyl/butaryl transferase GFC29_164 PF10431 C-terminal, D2-small domain, of ClpB protein GFC29_164 PF17871 AAA lid domain GFC29_164 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_164 PF07724 AAA domain (Cdc48 subfamily) GFC29_1640 PF00989 PAS fold GFC29_1640 PF00158 Sigma-54 interaction domain GFC29_1640 PF02954 Bacterial regulatory protein, Fis family GFC29_1641 PF11118 Protein of unknown function (DUF2627) GFC29_1642 PF03009 Glycerophosphoryl diester phosphodiesterase family GFC29_1643 PF14174 YycC-like protein GFC29_1644 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_1646 PF08769 Sporulation initiation factor Spo0A C terminal GFC29_1646 PF00072 Response regulator receiver domain GFC29_1647 PF17820 PDZ domain GFC29_1647 PF05580 SpoIVB peptidase S55 GFC29_1648 PF13476 AAA domain GFC29_1649 PF01316 Arginine repressor, DNA binding domain GFC29_1649 PF02863 Arginine repressor, C-terminal domain GFC29_165 PF13115 YtkA-like GFC29_1650 PF01479 S4 domain GFC29_1650 PF01728 FtsJ-like methyltransferase GFC29_1651 PF02780 Transketolase, C-terminal domain GFC29_1651 PF02779 Transketolase, pyrimidine binding domain GFC29_1651 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GFC29_1652 PF00348 Polyprenyl synthetase GFC29_1653 PF02609 Exonuclease VII small subunit GFC29_1654 PF02601 Exonuclease VII, large subunit GFC29_1654 PF13742 OB-fold nucleic acid binding domain GFC29_1655 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GFC29_1655 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GFC29_1656 PF01029 NusB family GFC29_1657 PF03780 Asp23 family, cell envelope-related function GFC29_1658 PF00289 Biotin carboxylase, N-terminal domain GFC29_1658 PF02785 Biotin carboxylase C-terminal domain GFC29_1658 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC29_1659 PF00364 Biotin-requiring enzyme GFC29_1660 PF12685 SpoIIIAH-like protein GFC29_1662 PF09581 Stage III sporulation protein AF (Spore_III_AF) GFC29_1663 PF09546 Stage III sporulation protein AE (spore_III_AE) GFC29_1664 PF06686 Stage III sporulation protein AC/AD protein family GFC29_1665 PF06686 Stage III sporulation protein AC/AD protein family GFC29_1666 PF09548 Stage III sporulation protein AB (spore_III_AB) GFC29_1668 PF10942 Protein of unknown function (DUF2619) GFC29_1669 PF09285 Elongation factor P, C-terminal GFC29_1669 PF08207 Elongation factor P (EF-P) KOW-like domain GFC29_1669 PF01132 Elongation factor P (EF-P) OB domain GFC29_167 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_167 PF12729 Four helix bundle sensory module for signal transduction GFC29_167 PF00672 HAMP domain GFC29_1670 PF01321 Creatinase/Prolidase N-terminal domain GFC29_1670 PF00557 Metallopeptidase family M24 GFC29_1671 PF01220 Dehydroquinase class II GFC29_1672 PF11085 Conserved membrane protein YqhR GFC29_1673 PF07136 Protein of unknown function (DUF1385) GFC29_1675 PF01734 Patatin-like phospholipase GFC29_1676 PF01325 Iron dependent repressor, N-terminal DNA binding domain GFC29_1676 PF02742 Iron dependent repressor, metal binding and dimerisation domain GFC29_1678 PF00704 Glycosyl hydrolases family 18 GFC29_1678 PF01476 LysM domain GFC29_1678 PF00704 Glycosyl hydrolases family 18 GFC29_1678 PF01476 LysM domain GFC29_168 PF03323 Bacillus/Clostridium GerA spore germination protein GFC29_1681 PF00317 Ribonucleotide reductase, all-alpha domain GFC29_1681 PF02867 Ribonucleotide reductase, barrel domain GFC29_1681 PF03477 ATP cone domain GFC29_1683 PF03099 Biotin/lipoate A/B protein ligase family GFC29_1684 PF00581 Rhodanese-like domain GFC29_1685 PF02347 Glycine cleavage system P-protein GFC29_1686 PF02347 Glycine cleavage system P-protein GFC29_1687 PF01571 Aminomethyltransferase folate-binding domain GFC29_1687 PF08669 Glycine cleavage T-protein C-terminal barrel domain GFC29_1688 PF00176 SNF2 family N-terminal domain GFC29_1688 PF00271 Helicase conserved C-terminal domain GFC29_1689 PF11079 Bacterial protein YqhG of unknown function GFC29_1690 PF14038 YqzE-like protein GFC29_1691 PF01202 Shikimate kinase GFC29_1695 PF00114 Pilin (bacterial filament) GFC29_1695 PF07963 Prokaryotic N-terminal methylation motif GFC29_1696 PF07963 Prokaryotic N-terminal methylation motif GFC29_1697 PF00482 Type II secretion system (T2SS), protein F GFC29_1698 PF00437 Type II/IV secretion system protein GFC29_17 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_17 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC29_170 PF03845 Spore germination protein GFC29_1700 PF11117 Protein of unknown function (DUF2626) GFC29_1702 PF00753 Metallo-beta-lactamase superfamily GFC29_1704 PF10958 Protein of unknown function (DUF2759) GFC29_1705 PF01910 Thiamine-binding protein GFC29_1706 PF01476 LysM domain GFC29_1706 PF00246 Zinc carboxypeptidase GFC29_1707 PF00884 Sulfatase GFC29_1708 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GFC29_1708 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GFC29_1709 PF00480 ROK family GFC29_171 PF06508 Queuosine biosynthesis protein QueC GFC29_1710 PF06014 Bacterial protein of unknown function (DUF910) GFC29_1711 PF03323 Bacillus/Clostridium GerA spore germination protein GFC29_1713 PF01694 Rhomboid family GFC29_1717 PF01812 5-formyltetrahydrofolate cyclo-ligase family GFC29_1718 PF00471 Ribosomal protein L33 GFC29_1719 PF00483 Nucleotidyl transferase GFC29_172 PF01242 6-pyruvoyl tetrahydropterin synthase GFC29_1722 PF01895 PhoU domain GFC29_1723 PF00005 ABC transporter GFC29_1725 PF07690 Major Facilitator Superfamily GFC29_1726 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GFC29_1726 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GFC29_1727 PF02743 Cache domain GFC29_1727 PF00672 HAMP domain GFC29_1727 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_1728 PF06691 Protein of unknown function (DUF1189) GFC29_1729 PF13538 UvrD-like helicase C-terminal domain GFC29_173 PF04055 Radical SAM superfamily GFC29_1730 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_1731 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_1732 PF12849 PBP superfamily domain GFC29_1734 PF04551 GcpE protein GFC29_1736 PF01475 Ferric uptake regulator family GFC29_1737 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) GFC29_1738 PF00950 ABC 3 transport family GFC29_1739 PF00005 ABC transporter GFC29_174 PF14489 QueF-like protein GFC29_1741 PF01261 Xylose isomerase-like TIM barrel GFC29_1742 PF00271 Helicase conserved C-terminal domain GFC29_1742 PF00270 DEAD/DEAH box helicase GFC29_1744 PF02401 LytB protein GFC29_1745 PF01784 NIF3 (NGG1p interacting factor 3) GFC29_1746 PF04816 tRNA (adenine(22)-N(1))-methyltransferase GFC29_1747 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GFC29_1749 PF00140 Sigma-70 factor, region 1.2 GFC29_1749 PF03979 Sigma-70 factor, region 1.1 GFC29_1749 PF04539 Sigma-70 region 3 GFC29_1749 PF04545 Sigma-70, region 4 GFC29_1749 PF04542 Sigma-70 region 2 GFC29_175 PF14489 QueF-like protein GFC29_1750 PF10410 DnaB-helicase binding domain of primase GFC29_1750 PF01807 CHC2 zinc finger GFC29_1750 PF08275 DNA primase catalytic core, N-terminal domain GFC29_1751 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GFC29_1753 PF03618 Kinase/pyrophosphorylase GFC29_1754 PF08279 HTH domain GFC29_1754 PF00571 CBS domain GFC29_1755 PF02565 Recombination protein O C terminal GFC29_1755 PF11967 Recombination protein O N terminal GFC29_1756 PF14006 YqzL-like protein GFC29_1757 PF07650 KH domain GFC29_1757 PF01926 50S ribosome-binding GTPase GFC29_1758 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GFC29_1759 PF01219 Prokaryotic diacylglycerol kinase GFC29_176 PF13460 NAD(P)H-binding GFC29_1760 PF02130 Uncharacterized protein family UPF0054 GFC29_1761 PF02562 PhoH-like protein GFC29_1762 PF06898 Putative stage IV sporulation protein YqfD GFC29_1763 PF07873 YabP family GFC29_1764 PF09424 Yqey-like protein GFC29_1765 PF01165 Ribosomal protein S21 GFC29_1766 PF02690 Na+/Pi-cotransporter GFC29_1767 PF01791 DeoC/LacD family aldolase GFC29_1768 PF04055 Radical SAM superfamily GFC29_1768 PF01938 TRAM domain GFC29_1768 PF00919 Uncharacterized protein family UPF0004 GFC29_1769 PF04452 RNA methyltransferase GFC29_177 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) GFC29_1771 PF01556 DnaJ C terminal domain GFC29_1771 PF00684 DnaJ central domain GFC29_1771 PF00226 DnaJ domain GFC29_1772 PF00012 Hsp70 protein GFC29_1773 PF01025 GrpE GFC29_1774 PF01628 HrcA protein C terminal domain GFC29_1775 PF04055 Radical SAM superfamily GFC29_1775 PF06969 HemN C-terminal domain GFC29_1776 PF00009 Elongation factor Tu GTP binding domain GFC29_1776 PF03144 Elongation factor Tu domain 2 GFC29_1776 PF06421 GTP-binding protein LepA C-terminus GFC29_1776 PF00679 Elongation factor G C-terminus GFC29_1777 PF12438 Protein of unknown function (DUF3679) GFC29_1778 PF07454 Stage II sporulation protein P (SpoIIP) GFC29_1779 PF03418 Germination protease GFC29_178 PF07486 Cell Wall Hydrolase GFC29_1780 PF01649 Ribosomal protein S20 GFC29_1781 PF06144 DNA polymerase III, delta subunit GFC29_1782 PF14141 YqzM-like protein GFC29_1783 PF13567 Domain of unknown function (DUF4131) GFC29_1783 PF00753 Metallo-beta-lactamase superfamily GFC29_1783 PF03772 Competence protein GFC29_1784 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GFC29_1785 PF10531 SLBB domain GFC29_1786 PF03807 NADP oxidoreductase coenzyme F420-dependent GFC29_1786 PF14748 Pyrroline-5-carboxylate reductase dimerisation GFC29_1787 PF13649 Methyltransferase domain GFC29_1789 PF01966 HD domain GFC29_1790 PF01467 Cytidylyltransferase-like GFC29_1791 PF01985 CRS1 / YhbY (CRM) domain GFC29_1792 PF01488 Shikimate / quinate 5-dehydrogenase GFC29_1792 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GFC29_1792 PF08501 Shikimate dehydrogenase substrate binding domain GFC29_1793 PF01926 50S ribosome-binding GTPase GFC29_1795 PF08970 Sporulation inhibitor A GFC29_1796 PF02666 Phosphatidylserine decarboxylase GFC29_1797 PF01066 CDP-alcohol phosphatidyltransferase GFC29_1798 PF01618 MotA/TolQ/ExbB proton channel family GFC29_1799 PF00691 OmpA family GFC29_1799 PF13677 Membrane MotB of proton-channel complex MotA/MotB GFC29_18 PF04198 Putative sugar-binding domain GFC29_180 PF04542 Sigma-70 region 2 GFC29_180 PF00196 Bacterial regulatory proteins, luxR family GFC29_1801 PF02673 Bacitracin resistance protein BacA GFC29_1802 PF09335 SNARE associated Golgi protein GFC29_1803 PF00375 Sodium:dicarboxylate symporter family GFC29_1804 PF04542 Sigma-70 region 2 GFC29_1804 PF04545 Sigma-70, region 4 GFC29_1806 PF07883 Cupin domain GFC29_1808 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC29_1810 PF01494 FAD binding domain GFC29_1811 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC29_1812 PF07883 Cupin domain GFC29_1813 PF00108 Thiolase, N-terminal domain GFC29_1813 PF02803 Thiolase, C-terminal domain GFC29_1814 PF00501 AMP-binding enzyme GFC29_1814 PF13193 AMP-binding enzyme C-terminal domain GFC29_1816 PF07690 Major Facilitator Superfamily GFC29_1817 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1818 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC29_1818 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC29_1819 PF07905 Purine catabolism regulatory protein-like family GFC29_1819 PF13556 PucR C-terminal helix-turn-helix domain GFC29_1819 PF17853 GGDEF-like domain GFC29_1821 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC29_1822 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_1823 PF01048 Phosphorylase superfamily GFC29_1824 PF13649 Methyltransferase domain GFC29_1826 PF10750 Protein of unknown function (DUF2536) GFC29_1827 PF07423 Domain of unknown function (DUF1510) GFC29_1828 PF03717 Penicillin-binding Protein dimerisation domain GFC29_1828 PF00905 Penicillin binding protein transpeptidase domain GFC29_1829 PF03449 Transcription elongation factor, N-terminal GFC29_1829 PF01272 Transcription elongation factor, GreA/GreB, C-term GFC29_1830 PF00485 Phosphoribulokinase / Uridine kinase family GFC29_1834 PF02618 YceG-like family GFC29_1835 PF06949 Protein of unknown function (DUF1292) GFC29_1836 PF03652 Holliday junction resolvase GFC29_1837 PF06135 IreB regulatory phosphoprotein GFC29_1838 PF02272 DHHA1 domain GFC29_1838 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GFC29_1838 PF01411 tRNA synthetases class II (A) GFC29_1839 PF01594 AI-2E family transporter GFC29_184 PF14166 YueH-like protein GFC29_1842 PF13538 UvrD-like helicase C-terminal domain GFC29_1842 PF14490 Helix-hairpin-helix containing domain GFC29_1842 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain GFC29_1845 PF00266 Aminotransferase class-V GFC29_1846 PF02082 Transcriptional regulator GFC29_1848 PF12002 MgsA AAA+ ATPase C terminal GFC29_1848 PF16193 AAA C-terminal domain GFC29_1848 PF05496 Holliday junction DNA helicase RuvB P-loop domain GFC29_1849 PF00440 Bacterial regulatory proteins, tetR family GFC29_185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_185 PF00512 His Kinase A (phospho-acceptor) domain GFC29_185 PF00989 PAS fold GFC29_185 PF08447 PAS fold GFC29_1850 PF00899 ThiF family GFC29_1851 PF02938 GAD domain GFC29_1851 PF00152 tRNA synthetases class II (D, K and N) GFC29_1851 PF01336 OB-fold nucleic acid binding domain GFC29_1852 PF03129 Anticodon binding domain GFC29_1852 PF13393 Histidyl-tRNA synthetase GFC29_1854 PF08239 Bacterial SH3 domain GFC29_1854 PF01520 N-acetylmuramoyl-L-alanine amidase GFC29_1855 PF02580 D-Tyr-tRNA(Tyr) deacylase GFC29_1856 PF02824 TGS domain GFC29_1856 PF04607 Region found in RelA / SpoT proteins GFC29_1856 PF13291 ACT domain GFC29_1857 PF00156 Phosphoribosyl transferase domain GFC29_1858 PF17768 RecJ OB domain GFC29_1858 PF02272 DHHA1 domain GFC29_1858 PF01368 DHH family GFC29_1858 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GFC29_1859 PF16916 Dimerisation domain of Zinc Transporter GFC29_1859 PF01545 Cation efflux family GFC29_186 PF00881 Nitroreductase family GFC29_1860 PF02355 Protein export membrane protein GFC29_1860 PF07549 SecD/SecF GG Motif GFC29_1862 PF14667 Polysaccharide biosynthesis C-terminal domain GFC29_1862 PF01943 Polysaccharide biosynthesis protein GFC29_1863 PF12670 Protein of unknown function (DUF3792) GFC29_1864 PF02699 Preprotein translocase subunit GFC29_1865 PF01702 Queuine tRNA-ribosyltransferase GFC29_1866 PF02547 Queuosine biosynthesis protein GFC29_1867 PF11146 Protein of unknown function (DUF2905) GFC29_1868 PF05491 RuvB C-terminal winged helix domain GFC29_1868 PF05496 Holliday junction DNA helicase RuvB P-loop domain GFC29_1868 PF17864 RuvB AAA lid domain GFC29_1869 PF07499 RuvA, C-terminal domain GFC29_1869 PF01330 RuvA N terminal domain GFC29_1870 PF08955 BofC C-terminal domain GFC29_1870 PF08977 Bypass of Forespore C, N terminal GFC29_1872 PF01709 Transcriptional regulator GFC29_1874 PF02540 NAD synthase GFC29_1876 PF01476 LysM domain GFC29_1877 PF02445 Quinolinate synthetase A protein GFC29_1878 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GFC29_1878 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GFC29_1879 PF02910 Fumarate reductase flavoprotein C-term GFC29_1879 PF00890 FAD binding domain GFC29_1880 PF00266 Aminotransferase class-V GFC29_1881 PF08279 HTH domain GFC29_1881 PF02829 3H domain GFC29_1882 PF02673 Bacitracin resistance protein BacA GFC29_1885 PF17755 UvrA DNA-binding domain GFC29_1885 PF17760 UvrA interaction domain GFC29_1885 PF00005 ABC transporter GFC29_1886 PF13411 MerR HTH family regulatory protein GFC29_1888 PF05593 RHS Repeat GFC29_1890 PF05593 RHS Repeat GFC29_1891 PF00800 Prephenate dehydratase GFC29_1891 PF01842 ACT domain GFC29_1892 PF01842 ACT domain GFC29_1893 PF01926 50S ribosome-binding GTPase GFC29_1893 PF01018 GTP1/OBG GFC29_1893 PF09269 Domain of unknown function (DUF1967) GFC29_1894 PF14682 Sporulation initiation phospho-transferase B, C-terminal GFC29_1894 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GFC29_1895 PF01016 Ribosomal L27 protein GFC29_1896 PF04327 Cysteine protease Prp GFC29_1897 PF00829 Ribosomal prokaryotic L21 protein GFC29_1898 PF02163 Peptidase family M50 GFC29_1899 PF01551 Peptidase family M23 GFC29_190 PF00563 EAL domain GFC29_190 PF00990 Diguanylate cyclase, GGDEF domain GFC29_190 PF08447 PAS fold GFC29_190 PF08448 PAS fold GFC29_1900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GFC29_1901 PF03775 Septum formation inhibitor MinC, C-terminal domain GFC29_1902 PF04093 rod shape-determining protein MreD GFC29_1903 PF04085 rod shape-determining protein MreC GFC29_1905 PF04002 RadC-like JAB domain GFC29_1906 PF02545 Maf-like protein GFC29_1912 PF01478 Type IV leader peptidase family GFC29_1912 PF06750 Bacterial Peptidase A24 N-terminal domain GFC29_1913 PF07963 Prokaryotic N-terminal methylation motif GFC29_1913 PF00114 Pilin (bacterial filament) GFC29_1914 PF00482 Type II secretion system (T2SS), protein F GFC29_1915 PF00437 Type II/IV secretion system protein GFC29_1916 PF00437 Type II/IV secretion system protein GFC29_192 PF00999 Sodium/hydrogen exchanger family GFC29_1925 PF08245 Mur ligase middle domain GFC29_1925 PF02875 Mur ligase family, glutamate ligase domain GFC29_1926 PF08264 Anticodon-binding domain of tRNA GFC29_1926 PF00133 tRNA synthetases class I (I, L, M and V) GFC29_1926 PF10458 Valyl tRNA synthetase tRNA binding arm GFC29_1929 PF01476 LysM domain GFC29_1929 PF01476 LysM domain GFC29_193 PF00561 alpha/beta hydrolase fold GFC29_193 PF08386 TAP-like protein GFC29_1930 PF00202 Aminotransferase class-III GFC29_1931 PF00490 Delta-aminolevulinic acid dehydratase GFC29_1932 PF02602 Uroporphyrinogen-III synthase HemD GFC29_1933 PF03900 Porphobilinogen deaminase, C-terminal domain GFC29_1933 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GFC29_1934 PF01578 Cytochrome C assembly protein GFC29_1935 PF01488 Shikimate / quinate 5-dehydrogenase GFC29_1935 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GFC29_1935 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GFC29_1937 PF01926 50S ribosome-binding GTPase GFC29_1938 PF02190 ATP-dependent protease La (LON) substrate-binding domain GFC29_1938 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_1938 PF05362 Lon protease (S16) C-terminal proteolytic domain GFC29_1939 PF05362 Lon protease (S16) C-terminal proteolytic domain GFC29_1939 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_1940 PF07724 AAA domain (Cdc48 subfamily) GFC29_1940 PF10431 C-terminal, D2-small domain, of ClpB protein GFC29_1940 PF06689 ClpX C4-type zinc finger GFC29_1941 PF05697 Bacterial trigger factor protein (TF) GFC29_1941 PF05698 Bacterial trigger factor protein (TF) C-terminus GFC29_1941 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GFC29_1943 PF00694 Aconitase C-terminal domain GFC29_1944 PF00330 Aconitase family (aconitate hydratase) GFC29_1945 PF00180 Isocitrate/isopropylmalate dehydrogenase GFC29_1946 PF08502 LeuA allosteric (dimerisation) domain GFC29_1946 PF00682 HMGL-like GFC29_1947 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GFC29_1947 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GFC29_1948 PF01842 ACT domain GFC29_1948 PF10369 Small subunit of acetolactate synthase GFC29_1949 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GFC29_1949 PF00205 Thiamine pyrophosphate enzyme, central domain GFC29_1949 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC29_195 PF03123 CAT RNA binding domain GFC29_195 PF00874 PRD domain GFC29_1950 PF01063 Amino-transferase class IV GFC29_1952 PF12850 Calcineurin-like phosphoesterase superfamily domain GFC29_1953 PF01725 Ham1 family GFC29_1954 PF01138 3' exoribonuclease family, domain 1 GFC29_1954 PF03725 3' exoribonuclease family, domain 2 GFC29_1955 PF10646 Sporulation and spore germination GFC29_1956 PF01177 Asp/Glu/Hydantoin racemase GFC29_1957 PF01047 MarR family GFC29_1958 PF00196 Bacterial regulatory proteins, luxR family GFC29_1959 PF13183 4Fe-4S dicluster domain GFC29_1959 PF13085 2Fe-2S iron-sulfur cluster binding domain GFC29_196 PF02378 Phosphotransferase system, EIIC GFC29_196 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GFC29_196 PF00367 phosphotransferase system, EIIB GFC29_1960 PF00890 FAD binding domain GFC29_1960 PF02910 Fumarate reductase flavoprotein C-term GFC29_1961 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GFC29_1962 PF10702 Protein of unknown function (DUF2507) GFC29_1963 PF13840 ACT domain GFC29_1963 PF01842 ACT domain GFC29_1963 PF00696 Amino acid kinase family GFC29_1965 PF08459 UvrC Helix-hairpin-helix N-terminal GFC29_1965 PF02151 UvrB/uvrC motif GFC29_1965 PF01541 GIY-YIG catalytic domain GFC29_1969 PF00535 Glycosyl transferase family 2 GFC29_197 PF00381 PTS HPr component phosphorylation site GFC29_1971 PF16363 GDP-mannose 4,6 dehydratase GFC29_1972 PF00296 Luciferase-like monooxygenase GFC29_1973 PF00085 Thioredoxin GFC29_1974 PF01012 Electron transfer flavoprotein domain GFC29_1974 PF00766 Electron transfer flavoprotein FAD-binding domain GFC29_1975 PF01012 Electron transfer flavoprotein domain GFC29_1976 PF00378 Enoyl-CoA hydratase/isomerase GFC29_1977 PF08359 YsiA-like protein, C-terminal region GFC29_1977 PF00440 Bacterial regulatory proteins, tetR family GFC29_1978 PF13193 AMP-binding enzyme C-terminal domain GFC29_1978 PF00501 AMP-binding enzyme GFC29_1979 PF03994 Domain of Unknown Function (DUF350) GFC29_198 PF00391 PEP-utilising enzyme, mobile domain GFC29_198 PF05524 PEP-utilising enzyme, N-terminal GFC29_198 PF02896 PEP-utilising enzyme, TIM barrel domain GFC29_1980 PF00488 MutS domain V GFC29_1980 PF01713 Smr domain GFC29_1981 PF14791 DNA polymerase beta thumb GFC29_1981 PF02811 PHP domain GFC29_1981 PF14716 Helix-hairpin-helix domain GFC29_1982 PF02674 Colicin V production protein GFC29_1983 PF05164 Cell division protein ZapA GFC29_1984 PF01351 Ribonuclease HII GFC29_1984 PF11858 Domain of unknown function (DUF3378) GFC29_1985 PF03176 MMPL family GFC29_1986 PF01047 MarR family GFC29_1987 PF12679 ABC-2 family transporter protein GFC29_1988 PF00005 ABC transporter GFC29_1989 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GFC29_1989 PF03483 B3/4 domain GFC29_1989 PF01588 Putative tRNA binding domain GFC29_1989 PF03484 tRNA synthetase B5 domain GFC29_1989 PF03147 Ferredoxin-fold anticodon binding domain GFC29_199 PF02743 Cache domain GFC29_199 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_199 PF00672 HAMP domain GFC29_1990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GFC29_1990 PF01409 tRNA synthetases class II core domain (F) GFC29_1992 PF08032 RNA 2'-O ribose methyltransferase substrate binding GFC29_1992 PF00588 SpoU rRNA Methylase family GFC29_1993 PF14098 Small, acid-soluble spore protein I GFC29_1995 PF13649 Methyltransferase domain GFC29_1996 PF05343 M42 glutamyl aminopeptidase GFC29_1999 PF00453 Ribosomal protein L20 GFC29_20 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_200 PF00106 short chain dehydrogenase GFC29_2000 PF01632 Ribosomal protein L35 GFC29_2001 PF05198 Translation initiation factor IF-3, N-terminal domain GFC29_2001 PF00707 Translation initiation factor IF-3, C-terminal domain GFC29_2002 PF03129 Anticodon binding domain GFC29_2002 PF02824 TGS domain GFC29_2002 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC29_2002 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GFC29_2003 PF08812 YtxC-like family GFC29_2004 PF07319 Primosomal protein DnaI N-terminus GFC29_2004 PF01695 IstB-like ATP binding protein GFC29_2005 PF07261 Replication initiation and membrane attachment GFC29_2006 PF03477 ATP cone domain GFC29_2008 PF02675 S-adenosylmethionine decarboxylase GFC29_2009 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFC29_2009 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFC29_201 PF05154 TM2 domain GFC29_2010 PF01121 Dephospho-CoA kinase GFC29_2011 PF06827 Zinc finger found in FPG and IleRS GFC29_2011 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GFC29_2011 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GFC29_2012 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GFC29_2012 PF01367 5'-3' exonuclease, C-terminal SAM fold GFC29_2012 PF00476 DNA polymerase family A GFC29_2013 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_2013 PF00989 PAS fold GFC29_2013 PF16736 Single Cache-like GFC29_2013 PF00512 His Kinase A (phospho-acceptor) domain GFC29_2014 PF00072 Response regulator receiver domain GFC29_2014 PF00486 Transcriptional regulatory protein, C terminal GFC29_2016 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GFC29_2016 PF00056 lactate/malate dehydrogenase, NAD binding domain GFC29_2017 PF00180 Isocitrate/isopropylmalate dehydrogenase GFC29_2018 PF00285 Citrate synthase, C-terminal domain GFC29_2019 PF04284 Protein of unknown function (DUF441) GFC29_202 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GFC29_202 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GFC29_2020 PF01594 AI-2E family transporter GFC29_2022 PF02887 Pyruvate kinase, alpha/beta domain GFC29_2022 PF00224 Pyruvate kinase, barrel domain GFC29_2022 PF00391 PEP-utilising enzyme, mobile domain GFC29_2023 PF00365 Phosphofructokinase GFC29_2024 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GFC29_2025 PF17848 Acetyl-coA carboxylase zinc finger domain GFC29_2025 PF01039 Carboxyl transferase domain GFC29_2026 PF00392 Bacterial regulatory proteins, gntR family GFC29_2027 PF00390 Malic enzyme, N-terminal domain GFC29_2027 PF03949 Malic enzyme, NAD binding domain GFC29_2028 PF07733 Bacterial DNA polymerase III alpha NTPase domain GFC29_2028 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GFC29_2028 PF02811 PHP domain GFC29_2028 PF14579 Helix-hairpin-helix motif GFC29_2028 PF01336 OB-fold nucleic acid binding domain GFC29_2029 PF14034 Sporulation protein YtrH GFC29_203 PF00155 Aminotransferase class I and II GFC29_2031 PF02272 DHHA1 domain GFC29_2031 PF01368 DHH family GFC29_2032 PF14007 YtpI-like protein GFC29_2033 PF07085 DRTGG domain GFC29_2033 PF03061 Thioesterase superfamily GFC29_2033 PF00392 Bacterial regulatory proteins, gntR family GFC29_2033 PF00571 CBS domain GFC29_2035 PF00557 Metallopeptidase family M24 GFC29_2035 PF01321 Creatinase/Prolidase N-terminal domain GFC29_2036 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GFC29_2036 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GFC29_2039 PF00582 Universal stress protein family GFC29_2040 PF00206 Lyase GFC29_2040 PF14698 Argininosuccinate lyase C-terminal GFC29_2041 PF00764 Arginosuccinate synthase GFC29_2043 PF13193 AMP-binding enzyme C-terminal domain GFC29_2043 PF00501 AMP-binding enzyme GFC29_2044 PF00994 Probable molybdopterin binding domain GFC29_2045 PF00871 Acetokinase family GFC29_2046 PF02384 N-6 DNA Methylase GFC29_2047 PF08534 Redoxin GFC29_2048 PF09579 Sporulation protein YtfJ (Spore_YtfJ) GFC29_205 PF01544 CorA-like Mg2+ transporter protein GFC29_2050 PF06271 RDD family GFC29_2051 PF01343 Peptidase family S49 GFC29_2052 PF01513 ATP-NAD kinase GFC29_2053 PF00501 AMP-binding enzyme GFC29_2053 PF13193 AMP-binding enzyme C-terminal domain GFC29_2054 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC29_2055 PF02926 THUMP domain GFC29_2055 PF02568 Thiamine biosynthesis protein (ThiI) GFC29_2056 PF00266 Aminotransferase class-V GFC29_2057 PF06160 Septation ring formation regulator, EzrA GFC29_2058 PF02811 PHP domain GFC29_2059 PF13185 GAF domain GFC29_2060 PF00990 Diguanylate cyclase, GGDEF domain GFC29_2061 PF01479 S4 domain GFC29_2061 PF00163 Ribosomal protein S4/S9 N-terminal domain GFC29_2062 PF00579 tRNA synthetases class I (W and Y) GFC29_2062 PF01479 S4 domain GFC29_2063 PF00912 Transglycosylase GFC29_2063 PF00905 Penicillin binding protein transpeptidase domain GFC29_2064 PF13193 AMP-binding enzyme C-terminal domain GFC29_2064 PF00501 AMP-binding enzyme GFC29_2065 PF00583 Acetyltransferase (GNAT) family GFC29_2066 PF00571 CBS domain GFC29_2067 PF00850 Histone deacetylase domain GFC29_2068 PF00356 Bacterial regulatory proteins, lacI family GFC29_2069 PF01817 Chorismate mutase type II GFC29_2069 PF00793 DAHP synthetase I family GFC29_2070 PF02491 SHS2 domain inserted in FTSA GFC29_2071 PF11009 Protein of unknown function (DUF2847) GFC29_2074 PF02073 Thermophilic metalloprotease (M29) GFC29_2075 PF01225 Mur ligase family, catalytic domain GFC29_2075 PF08245 Mur ligase middle domain GFC29_2075 PF02875 Mur ligase family, glutamate ligase domain GFC29_2076 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GFC29_2076 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GFC29_2076 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GFC29_2077 PF09397 Ftsk gamma domain GFC29_2077 PF01580 FtsK/SpoIIIE family GFC29_2077 PF17854 FtsK alpha domain GFC29_2077 PF09397 Ftsk gamma domain GFC29_2077 PF17854 FtsK alpha domain GFC29_2077 PF01580 FtsK/SpoIIIE family GFC29_2078 PF01588 Putative tRNA binding domain GFC29_2078 PF14794 Domain of unknown function (DUF4479) GFC29_2079 PF07285 Protein of unknown function (DUF1444) GFC29_208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_208 PF00512 His Kinase A (phospho-acceptor) domain GFC29_2080 PF00085 Thioredoxin GFC29_2081 PF01931 Protein of unknown function DUF84 GFC29_2082 PF05343 M42 glutamyl aminopeptidase GFC29_2084 PF00753 Metallo-beta-lactamase superfamily GFC29_2085 PF02390 Putative methyltransferase GFC29_2086 PF01636 Phosphotransferase enzyme family GFC29_2087 PF14165 YtzH-like protein GFC29_2088 PF00128 Alpha amylase, catalytic domain GFC29_2088 PF17999 Pullulanase N1-terminal domain GFC29_2088 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GFC29_2090 PF04172 LrgB-like family GFC29_2091 PF03788 LrgA family GFC29_2092 PF02834 LigT like Phosphoesterase GFC29_2093 PF12832 MFS_1 like family GFC29_2094 PF01546 Peptidase family M20/M25/M40 GFC29_2095 PF08220 DeoR-like helix-turn-helix domain GFC29_2096 PF00849 RNA pseudouridylate synthase GFC29_2096 PF01479 S4 domain GFC29_2098 PF01943 Polysaccharide biosynthesis protein GFC29_2098 PF14667 Polysaccharide biosynthesis C-terminal domain GFC29_21 PF03611 PTS system sugar-specific permease component GFC29_210 PF00072 Response regulator receiver domain GFC29_210 PF01584 CheW-like domain GFC29_2100 PF10957 Sporulation protein Cse60 GFC29_2104 PF00581 Rhodanese-like domain GFC29_2105 PF08264 Anticodon-binding domain of tRNA GFC29_2105 PF00133 tRNA synthetases class I (I, L, M and V) GFC29_2105 PF13603 Leucyl-tRNA synthetase, Domain 2 GFC29_2105 PF09334 tRNA synthetases class I (M) GFC29_2107 PF07690 Major Facilitator Superfamily GFC29_2109 PF10732 Protein of unknown function (DUF2524) GFC29_211 PF14177 YkyB-like protein GFC29_2110 PF16199 Radical_SAM C-terminal domain GFC29_2110 PF04055 Radical SAM superfamily GFC29_2111 PF06962 Putative rRNA methylase GFC29_2112 PF10776 Protein of unknown function (DUF2600) GFC29_2113 PF12146 Serine aminopeptidase, S33 GFC29_2114 PF00132 Bacterial transferase hexapeptide (six repeats) GFC29_2115 PF13537 Glutamine amidotransferase domain GFC29_2115 PF00733 Asparagine synthase GFC29_2116 PF13529 Peptidase_C39 like family GFC29_2117 PF00438 S-adenosylmethionine synthetase, N-terminal domain GFC29_2117 PF02773 S-adenosylmethionine synthetase, C-terminal domain GFC29_2117 PF02772 S-adenosylmethionine synthetase, central domain GFC29_2118 PF01293 Phosphoenolpyruvate carboxykinase GFC29_2119 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GFC29_212 PF02541 Ppx/GppA phosphatase family GFC29_2120 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GFC29_2120 PF00361 Proton-conducting membrane transporter GFC29_2121 PF10763 Protein of unknown function (DUF2584) GFC29_2122 PF00326 Prolyl oligopeptidase family GFC29_2124 PF00005 ABC transporter GFC29_2125 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_2126 PF00293 NUDIX domain GFC29_2127 PF10057 Uncharacterized conserved protein (DUF2294) GFC29_2129 PF05105 Bacteriophage holin family GFC29_213 PF13089 Polyphosphate kinase N-terminal domain GFC29_213 PF17941 Polyphosphate kinase C-terminal domain 1 GFC29_213 PF13090 Polyphosphate kinase C-terminal domain 2 GFC29_213 PF02503 Polyphosphate kinase middle domain GFC29_2130 PF00210 Ferritin-like domain GFC29_2131 PF02664 S-Ribosylhomocysteinase (LuxS) GFC29_2132 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment GFC29_2132 PF01297 Zinc-uptake complex component A periplasmic GFC29_2133 PF01654 Cytochrome bd terminal oxidase subunit I GFC29_2134 PF02322 Cytochrome bd terminal oxidase subunit II GFC29_2139 PF07561 Domain of Unknown Function (DUF1540) GFC29_214 PF00149 Calcineurin-like phosphoesterase GFC29_214 PF10518 TAT (twin-arginine translocation) pathway signal sequence GFC29_2140 PF13193 AMP-binding enzyme C-terminal domain GFC29_2140 PF00501 AMP-binding enzyme GFC29_2141 PF00378 Enoyl-CoA hydratase/isomerase GFC29_2142 PF00561 alpha/beta hydrolase fold GFC29_2143 PF16582 Middle domain of thiamine pyrophosphate GFC29_2143 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC29_2143 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GFC29_2144 PF00425 chorismate binding enzyme GFC29_2145 PF01040 UbiA prenyltransferase family GFC29_2146 PF01258 Prokaryotic dksA/traR C4-type zinc finger GFC29_2148 PF00343 Carbohydrate phosphorylase GFC29_2150 PF00534 Glycosyl transferases group 1 GFC29_2150 PF08323 Starch synthase catalytic domain GFC29_2151 PF00132 Bacterial transferase hexapeptide (six repeats) GFC29_2151 PF00483 Nucleotidyl transferase GFC29_2152 PF00483 Nucleotidyl transferase GFC29_2153 PF00128 Alpha amylase, catalytic domain GFC29_2153 PF02806 Alpha amylase, C-terminal all-beta domain GFC29_2153 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GFC29_2154 PF01545 Cation efflux family GFC29_216 PF13529 Peptidase_C39 like family GFC29_217 PF10388 EAL-domain associated signalling protein domain GFC29_217 PF00563 EAL domain GFC29_2173 PF00892 EamA-like transporter family GFC29_2175 PF02308 MgtC family GFC29_2176 PF02743 Cache domain GFC29_2176 PF00672 HAMP domain GFC29_2176 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_2177 PF07478 D-ala D-ala ligase C-terminus GFC29_2177 PF01820 D-ala D-ala ligase N-terminus GFC29_2178 PF07504 Fungalysin/Thermolysin Propeptide Motif GFC29_2178 PF01447 Thermolysin metallopeptidase, catalytic domain GFC29_2178 PF03413 Peptidase propeptide and YPEB domain GFC29_2178 PF02868 Thermolysin metallopeptidase, alpha-helical domain GFC29_2180 PF00583 Acetyltransferase (GNAT) family GFC29_2181 PF07690 Major Facilitator Superfamily GFC29_2182 PF05225 helix-turn-helix, Psq domain GFC29_2182 PF02810 SEC-C motif GFC29_2183 PF08141 Small acid-soluble spore protein H family GFC29_2184 PF08868 YugN-like family GFC29_2185 PF07885 Ion channel GFC29_2185 PF02254 TrkA-N domain GFC29_2188 PF01381 Helix-turn-helix GFC29_2189 PF00342 Phosphoglucose isomerase GFC29_219 PF08796 Protein of unknown function (DUF1797) GFC29_2191 PF00465 Iron-containing alcohol dehydrogenase GFC29_2192 PF04070 Domain of unknown function (DUF378) GFC29_2193 PF00575 S1 RNA binding domain GFC29_2195 PF00155 Aminotransferase class I and II GFC29_2196 PF01037 Lrp/AsnC ligand binding domain GFC29_2197 PF08958 Domain of unknown function (DUF1871) GFC29_2198 PF00155 Aminotransferase class I and II GFC29_2200 PF00080 Copper/zinc superoxide dismutase (SODC) GFC29_2202 PF00929 Exonuclease GFC29_2204 PF03600 Citrate transporter GFC29_2206 PF02632 BioY family GFC29_2207 PF01384 Phosphate transporter family GFC29_2208 PF01865 Protein of unknown function DUF47 GFC29_2209 PF00883 Cytosol aminopeptidase family, catalytic domain GFC29_2209 PF02789 Cytosol aminopeptidase family, N-terminal domain GFC29_221 PF14156 Antirepressor AbbA GFC29_2211 PF01497 Periplasmic binding protein GFC29_2212 PF06725 3D domain GFC29_2213 PF14068 Putative membrane protein GFC29_2215 PF00293 NUDIX domain GFC29_2215 PF13344 Haloacid dehalogenase-like hydrolase GFC29_2216 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2217 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2218 PF01521 Iron-sulphur cluster biosynthesis GFC29_2219 PF01678 Diaminopimelate epimerase GFC29_2221 PF07293 Protein of unknown function (DUF1450) GFC29_2222 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2223 PF13536 Putative multidrug resistance efflux transporter GFC29_2224 PF07315 Protein of unknown function (DUF1462) GFC29_2225 PF01106 NifU-like domain GFC29_2226 PF00288 GHMP kinases N terminal domain GFC29_2226 PF08544 GHMP kinases C terminal GFC29_2227 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_2228 PF03447 Homoserine dehydrogenase, NAD binding domain GFC29_2228 PF01842 ACT domain GFC29_2228 PF00742 Homoserine dehydrogenase GFC29_223 PF01925 Sulfite exporter TauE/SafE GFC29_2230 PF00872 Transposase, Mutator family GFC29_2236 PF00665 Integrase core domain GFC29_2237 PF00665 Integrase core domain GFC29_2238 PF01695 IstB-like ATP binding protein GFC29_224 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_224 PF03466 LysR substrate binding domain GFC29_2240 PF01695 IstB-like ATP binding protein GFC29_2243 PF00872 Transposase, Mutator family GFC29_2245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GFC29_2245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GFC29_2247 PF04608 Phosphatidylglycerophosphatase A GFC29_2248 PF13344 Haloacid dehalogenase-like hydrolase GFC29_225 PF00132 Bacterial transferase hexapeptide (six repeats) GFC29_225 PF14602 Hexapeptide repeat of succinyl-transferase GFC29_225 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GFC29_2250 PF01934 Protein of unknown function DUF86 GFC29_2253 PF06265 Protein of unknown function (DUF1027) GFC29_2254 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GFC29_2256 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GFC29_2256 PF04055 Radical SAM superfamily GFC29_2257 PF01551 Peptidase family M23 GFC29_2258 PF09560 Sporulation protein YunB (Spo_YunB) GFC29_2259 PF08827 Domain of unknown function (DUF1805) GFC29_226 PF01546 Peptidase family M20/M25/M40 GFC29_226 PF07687 Peptidase dimerisation domain GFC29_2260 PF02872 5'-nucleotidase, C-terminal domain GFC29_2261 PF01925 Sulfite exporter TauE/SafE GFC29_2262 PF01904 Protein of unknown function DUF72 GFC29_2263 PF01458 Uncharacterized protein family (UPF0051) GFC29_2264 PF01592 NifU-like N terminal domain GFC29_2265 PF00266 Aminotransferase class-V GFC29_2266 PF01458 Uncharacterized protein family (UPF0051) GFC29_2267 PF00005 ABC transporter GFC29_2268 PF02627 Carboxymuconolactone decarboxylase family GFC29_2269 PF03180 NLPA lipoprotein GFC29_227 PF03698 Uncharacterised protein family (UPF0180) GFC29_2270 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_2271 PF00005 ABC transporter GFC29_2271 PF09383 NIL domain GFC29_2272 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC29_2274 PF00085 Thioredoxin GFC29_2275 PF01751 Toprim domain GFC29_2276 PF01597 Glycine cleavage H-protein GFC29_2277 PF03960 ArsC family GFC29_2278 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC29_2278 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC29_2278 PF02770 Acyl-CoA dehydrogenase, middle domain GFC29_2279 PF00108 Thiolase, N-terminal domain GFC29_2279 PF02803 Thiolase, C-terminal domain GFC29_228 PF10417 C-terminal domain of 1-Cys peroxiredoxin GFC29_228 PF00578 AhpC/TSA family GFC29_2280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC29_2280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC29_2280 PF00378 Enoyl-CoA hydratase/isomerase GFC29_2281 PF14115 YuzL-like protein GFC29_2282 PF01619 Proline dehydrogenase GFC29_2284 PF07875 Coat F domain GFC29_2288 PF03649 Uncharacterised protein family (UPF0014) GFC29_229 PF00578 AhpC/TSA family GFC29_2293 PF00535 Glycosyl transferase family 2 GFC29_230 PF00578 AhpC/TSA family GFC29_2301 PF07098 Protein of unknown function (DUF1360) GFC29_2303 PF07552 Spore Coat Protein X and V domain GFC29_2304 PF10612 Spore coat protein Z GFC29_2307 PF00881 Nitroreductase family GFC29_2308 PF00664 ABC transporter transmembrane region GFC29_2308 PF00005 ABC transporter GFC29_2309 PF00005 ABC transporter GFC29_2309 PF00664 ABC transporter transmembrane region GFC29_231 PF02080 TrkA-C domain GFC29_231 PF02254 TrkA-N domain GFC29_2310 PF00990 Diguanylate cyclase, GGDEF domain GFC29_2311 PF10835 Protein of unknown function (DUF2573) GFC29_2312 PF13411 MerR HTH family regulatory protein GFC29_2312 PF02607 B12 binding domain GFC29_2313 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2315 PF00440 Bacterial regulatory proteins, tetR family GFC29_2316 PF00719 Inorganic pyrophosphatase GFC29_2319 PF00005 ABC transporter GFC29_232 PF00753 Metallo-beta-lactamase superfamily GFC29_232 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GFC29_232 PF17770 Ribonuclease J C-terminal domain GFC29_2325 PF00719 Inorganic pyrophosphatase GFC29_2326 PF00872 Transposase, Mutator family GFC29_2328 PF05593 RHS Repeat GFC29_2330 PF05593 RHS Repeat GFC29_2332 PF05593 RHS Repeat GFC29_2334 PF05593 RHS Repeat GFC29_2336 PF05593 RHS Repeat GFC29_2337 PF01668 SmpB protein GFC29_2338 PF17876 Cold shock domain GFC29_2338 PF08206 Ribonuclease B OB domain GFC29_2338 PF00773 RNB domain GFC29_2338 PF00575 S1 RNA binding domain GFC29_2339 PF12146 Serine aminopeptidase, S33 GFC29_2340 PF03840 Preprotein translocase SecG subunit GFC29_2342 PF03952 Enolase, N-terminal domain GFC29_2342 PF00113 Enolase, C-terminal TIM barrel domain GFC29_2343 PF01676 Metalloenzyme superfamily GFC29_2343 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GFC29_2344 PF00121 Triosephosphate isomerase GFC29_2345 PF00162 Phosphoglycerate kinase GFC29_2346 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GFC29_2346 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GFC29_2347 PF04198 Putative sugar-binding domain GFC29_2349 PF04963 Sigma-54 factor, core binding domain GFC29_2349 PF00309 Sigma-54 factor, Activator interacting domain (AID) GFC29_2349 PF04552 Sigma-54, DNA binding domain GFC29_235 PF01327 Polypeptide deformylase GFC29_2352 PF00574 Clp protease GFC29_2353 PF00381 PTS HPr component phosphorylation site GFC29_2354 PF02650 WhiA C-terminal HTH domain GFC29_2354 PF10298 WhiA N-terminal LAGLIDADG-like domain GFC29_2354 PF14527 WhiA LAGLIDADG-like domain GFC29_2355 PF01933 Uncharacterised protein family UPF0052 GFC29_2356 PF03668 P-loop ATPase protein family GFC29_2357 PF00293 NUDIX domain GFC29_2358 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GFC29_2360 PF01502 Phosphoribosyl-AMP cyclohydrolase GFC29_2361 PF00977 Histidine biosynthesis protein GFC29_2362 PF00977 Histidine biosynthesis protein GFC29_2363 PF00117 Glutamine amidotransferase class-I GFC29_2364 PF00475 Imidazoleglycerol-phosphate dehydratase GFC29_2365 PF00815 Histidinol dehydrogenase GFC29_2366 PF01634 ATP phosphoribosyltransferase GFC29_2367 PF13393 Histidyl-tRNA synthetase GFC29_2369 PF14602 Hexapeptide repeat of succinyl-transferase GFC29_237 PF00676 Dehydrogenase E1 component GFC29_2370 PF13419 Haloacid dehalogenase-like hydrolase GFC29_2371 PF07670 Nucleoside recognition GFC29_2372 PF01790 Prolipoprotein diacylglyceryl transferase GFC29_2373 PF07475 HPr Serine kinase C-terminal domain GFC29_2373 PF02603 HPr Serine kinase N terminus GFC29_2374 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV GFC29_2376 PF17760 UvrA interaction domain GFC29_2376 PF00005 ABC transporter GFC29_2376 PF17755 UvrA DNA-binding domain GFC29_2377 PF17757 UvrB interaction domain GFC29_2377 PF04851 Type III restriction enzyme, res subunit GFC29_2377 PF02151 UvrB/uvrC motif GFC29_2377 PF00271 Helicase conserved C-terminal domain GFC29_2377 PF12344 Ultra-violet resistance protein B GFC29_2378 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) GFC29_2379 PF17820 PDZ domain GFC29_238 PF02780 Transketolase, C-terminal domain GFC29_238 PF02779 Transketolase, pyrimidine binding domain GFC29_2380 PF13411 MerR HTH family regulatory protein GFC29_2382 PF13358 DDE superfamily endonuclease GFC29_2387 PF00535 Glycosyl transferase family 2 GFC29_2389 PF03572 Peptidase family S41 GFC29_2389 PF01471 Putative peptidoglycan binding domain GFC29_2389 PF17820 PDZ domain GFC29_239 PF00364 Biotin-requiring enzyme GFC29_239 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC29_239 PF02817 e3 binding domain GFC29_2390 PF16916 Dimerisation domain of Zinc Transporter GFC29_2390 PF01545 Cation efflux family GFC29_2391 PF01022 Bacterial regulatory protein, arsR family GFC29_2394 PF00571 CBS domain GFC29_2394 PF01595 Cyclin M transmembrane N-terminal domain GFC29_2394 PF03471 Transporter associated domain GFC29_2395 PF04298 Putative neutral zinc metallopeptidase GFC29_2396 PF13411 MerR HTH family regulatory protein GFC29_2397 PF13192 Thioredoxin domain GFC29_2397 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2398 PF00578 AhpC/TSA family GFC29_2399 PF00877 NlpC/P60 family GFC29_24 PF01738 Dienelactone hydrolase family GFC29_240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC29_240 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_2400 PF18075 FtsX extracellular domain GFC29_2400 PF02687 FtsX-like permease family GFC29_2401 PF00005 ABC transporter GFC29_2402 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GFC29_2403 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC29_2403 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC29_2404 PF03462 PCRF domain GFC29_2404 PF00472 RF-1 domain GFC29_2405 PF07517 SecA DEAD-like domain GFC29_2405 PF01043 SecA preprotein cross-linking domain GFC29_2405 PF02810 SEC-C motif GFC29_2405 PF07516 SecA Wing and Scaffold domain GFC29_2407 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus GFC29_2407 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GFC29_2411 PF02561 Flagellar protein FliS GFC29_2412 PF07195 Flagellar hook-associated protein 2 C-terminus GFC29_2412 PF07196 Flagellin hook IN motif GFC29_2412 PF02465 Flagellar hook-associated protein 2 N-terminus GFC29_2414 PF00669 Bacterial flagellin N-terminal helical region GFC29_2414 PF00700 Bacterial flagellin C-terminal helical region GFC29_2415 PF02348 Cytidylyltransferase GFC29_2416 PF00483 Nucleotidyl transferase GFC29_2418 PF03102 NeuB family GFC29_2418 PF08666 SAF domain GFC29_2419 PF02350 UDP-N-acetylglucosamine 2-epimerase GFC29_2420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GFC29_2421 PF01370 NAD dependent epimerase/dehydratase family GFC29_2426 PF00669 Bacterial flagellin N-terminal helical region GFC29_2426 PF00700 Bacterial flagellin C-terminal helical region GFC29_2427 PF02599 Global regulator protein family GFC29_2428 PF02623 FliW protein GFC29_2430 PF00700 Bacterial flagellin C-terminal helical region GFC29_2430 PF00669 Bacterial flagellin N-terminal helical region GFC29_2431 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC29_2431 PF00460 Flagella basal body rod protein GFC29_2433 PF04316 Anti-sigma-28 factor, FlgM GFC29_2435 PF03885 Protein of unknown function (DUF327) GFC29_2438 PF14572 Phosphoribosyl synthetase-associated domain GFC29_2438 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GFC29_2439 PF00271 Helicase conserved C-terminal domain GFC29_2439 PF04851 Type III restriction enzyme, res subunit GFC29_2440 PF02645 Uncharacterised protein, DegV family COG1307 GFC29_2441 PF00072 Response regulator receiver domain GFC29_2441 PF00196 Bacterial regulatory proteins, luxR family GFC29_2442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_2442 PF05384 Sensor protein DegS GFC29_2442 PF07730 Histidine kinase GFC29_2443 PF09186 Domain of unknown function (DUF1949) GFC29_2443 PF01205 Uncharacterized protein family UPF0029 GFC29_2444 PF03816 Cell envelope-related transcriptional attenuator domain GFC29_2445 PF00953 Glycosyl transferase family 4 GFC29_2446 PF03023 Lipid II flippase MurJ GFC29_2449 PF00534 Glycosyl transferases group 1 GFC29_2449 PF13439 Glycosyltransferase Family 4 GFC29_245 PF01276 Orn/Lys/Arg decarboxylase, major domain GFC29_245 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GFC29_2451 PF00395 S-layer homology domain GFC29_2451 PF01520 N-acetylmuramoyl-L-alanine amidase GFC29_2452 PF00082 Subtilase family GFC29_2453 PF08239 Bacterial SH3 domain GFC29_2453 PF05036 Sporulation related domain GFC29_2453 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GFC29_2454 PF01522 Polysaccharide deacetylase GFC29_2455 PF01497 Periplasmic binding protein GFC29_2459 PF04203 Sortase domain GFC29_246 PF03060 Nitronate monooxygenase GFC29_2463 PF00664 ABC transporter transmembrane region GFC29_2463 PF00005 ABC transporter GFC29_2464 PF00005 ABC transporter GFC29_2464 PF00664 ABC transporter transmembrane region GFC29_2465 PF02322 Cytochrome bd terminal oxidase subunit II GFC29_2466 PF01654 Cytochrome bd terminal oxidase subunit I GFC29_2468 PF13332 Hemagglutinin repeat GFC29_2468 PF13018 Extended Signal Peptide of Type V secretion system GFC29_2468 PF02661 Fic/DOC family GFC29_2468 PF03543 Yersinia/Haemophilus virulence surface antigen GFC29_2468 PF05860 haemagglutination activity domain GFC29_247 PF05256 Uncharacterised protein family (UPF0223) GFC29_2471 PF03099 Biotin/lipoate A/B protein ligase family GFC29_2471 PF10437 Bacterial lipoate protein ligase C-terminus GFC29_2476 PF03992 Antibiotic biosynthesis monooxygenase GFC29_2477 PF02687 FtsX-like permease family GFC29_2478 PF00005 ABC transporter GFC29_2479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_2480 PF00486 Transcriptional regulatory protein, C terminal GFC29_2480 PF00072 Response regulator receiver domain GFC29_2482 PF05373 L-proline 3-hydroxylase, C-terminal GFC29_2482 PF05118 Aspartyl/Asparaginyl beta-hydroxylase GFC29_2483 PF05373 L-proline 3-hydroxylase, C-terminal GFC29_2483 PF05118 Aspartyl/Asparaginyl beta-hydroxylase GFC29_2484 PF03466 LysR substrate binding domain GFC29_2484 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_2485 PF01266 FAD dependent oxidoreductase GFC29_2485 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GFC29_2486 PF00158 Sigma-54 interaction domain GFC29_2486 PF00989 PAS fold GFC29_2486 PF02954 Bacterial regulatory protein, Fis family GFC29_2487 PF02733 Dak1 domain GFC29_2488 PF02734 DAK2 domain GFC29_2489 PF00381 PTS HPr component phosphorylation site GFC29_2489 PF00391 PEP-utilising enzyme, mobile domain GFC29_2489 PF03610 PTS system fructose IIA component GFC29_2489 PF05524 PEP-utilising enzyme, N-terminal GFC29_249 PF00459 Inositol monophosphatase family GFC29_2490 PF00381 PTS HPr component phosphorylation site GFC29_2491 PF00230 Major intrinsic protein GFC29_2493 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC29_2493 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC29_2494 PF01027 Inhibitor of apoptosis-promoting Bax1 GFC29_25 PF10415 Fumarase C C-terminus GFC29_25 PF00206 Lyase GFC29_2500 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GFC29_2508 PF02899 Phage integrase, N-terminal SAM-like domain GFC29_2508 PF00589 Phage integrase family GFC29_2511 PF00395 S-layer homology domain GFC29_2512 PF01695 IstB-like ATP binding protein GFC29_2515 PF01695 IstB-like ATP binding protein GFC29_2517 PF00665 Integrase core domain GFC29_2517 PF02796 Helix-turn-helix domain of resolvase GFC29_2519 PF02368 Bacterial Ig-like domain (group 2) GFC29_2519 PF13205 Bacterial Ig-like domain GFC29_2519 PF00395 S-layer homology domain GFC29_252 PF14036 YlaH-like protein GFC29_2520 PF00877 NlpC/P60 family GFC29_2522 PF02903 Alpha amylase, N-terminal ig-like domain GFC29_2522 PF00395 S-layer homology domain GFC29_2522 PF00128 Alpha amylase, catalytic domain GFC29_2523 PF00082 Subtilase family GFC29_2524 PF07516 SecA Wing and Scaffold domain GFC29_2524 PF07517 SecA DEAD-like domain GFC29_2524 PF01043 SecA preprotein cross-linking domain GFC29_2527 PF03023 Lipid II flippase MurJ GFC29_2528 PF03808 Glycosyl transferase WecB/TagA/CpsF family GFC29_2529 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFC29_2529 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GFC29_2529 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFC29_2530 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFC29_2530 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GFC29_2530 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFC29_2532 PF02350 UDP-N-acetylglucosamine 2-epimerase GFC29_2533 PF03816 Cell envelope-related transcriptional attenuator domain GFC29_2534 PF01476 LysM domain GFC29_2534 PF00877 NlpC/P60 family GFC29_2536 PF00176 SNF2 family N-terminal domain GFC29_2536 PF00271 Helicase conserved C-terminal domain GFC29_2536 PF12419 SNF2 Helicase protein GFC29_2539 PF00436 Single-strand binding protein family GFC29_254 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) GFC29_2540 PF14183 YwpF-like protein GFC29_2541 PF04203 Sortase domain GFC29_2543 PF13840 ACT domain GFC29_2543 PF00696 Amino acid kinase family GFC29_2548 PF00171 Aldehyde dehydrogenase family GFC29_2552 PF00440 Bacterial regulatory proteins, tetR family GFC29_2552 PF13977 BetI-type transcriptional repressor, C-terminal GFC29_2553 PF07690 Major Facilitator Superfamily GFC29_2554 PF00440 Bacterial regulatory proteins, tetR family GFC29_2556 PF00480 ROK family GFC29_2557 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC29_2557 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC29_2559 PF07702 UTRA domain GFC29_2559 PF00392 Bacterial regulatory proteins, gntR family GFC29_256 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GFC29_2560 PF00232 Glycosyl hydrolase family 1 GFC29_2561 PF02378 Phosphotransferase system, EIIC GFC29_2562 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GFC29_2563 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_2564 PF01238 Phosphomannose isomerase type I GFC29_2566 PF12792 CSS motif domain associated with EAL GFC29_2566 PF00563 EAL domain GFC29_2568 PF13407 Periplasmic binding protein domain GFC29_2569 PF02653 Branched-chain amino acid transport system / permease component GFC29_257 PF13638 PIN domain GFC29_257 PF02562 PhoH-like protein GFC29_2570 PF00005 ABC transporter GFC29_2571 PF05025 RbsD / FucU transport protein family GFC29_2572 PF00294 pfkB family carbohydrate kinase GFC29_2573 PF00356 Bacterial regulatory proteins, lacI family GFC29_2574 PF01238 Phosphomannose isomerase type I GFC29_2577 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_2578 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_2580 PF04041 beta-1,4-mannooligosaccharide phosphorylase GFC29_2581 PF00356 Bacterial regulatory proteins, lacI family GFC29_2585 PF07977 FabA-like domain GFC29_2587 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC29_2587 PF00460 Flagella basal body rod protein GFC29_2588 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC29_2588 PF00460 Flagella basal body rod protein GFC29_259 PF07408 Protein of unknown function (DUF1507) GFC29_2590 PF12116 Stage III sporulation protein D GFC29_2592 PF01551 Peptidase family M23 GFC29_2593 PF08486 Stage II sporulation protein GFC29_2594 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GFC29_2595 PF08680 TATA-box binding GFC29_2596 PF06612 Protein of unknown function (DUF1146) GFC29_2597 PF00361 Proton-conducting membrane transporter GFC29_2598 PF00361 Proton-conducting membrane transporter GFC29_2599 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GFC29_2599 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus GFC29_2599 PF00361 Proton-conducting membrane transporter GFC29_260 PF01098 Cell cycle protein GFC29_2600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GFC29_2601 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GFC29_2603 PF00146 NADH dehydrogenase GFC29_2604 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GFC29_2605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GFC29_2606 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GFC29_2607 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GFC29_2608 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GFC29_2608 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GFC29_2609 PF02874 ATP synthase alpha/beta family, beta-barrel domain GFC29_2609 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC29_261 PF02436 Conserved carboxylase domain GFC29_261 PF00682 HMGL-like GFC29_261 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC29_261 PF00364 Biotin-requiring enzyme GFC29_261 PF02785 Biotin carboxylase C-terminal domain GFC29_261 PF00289 Biotin carboxylase, N-terminal domain GFC29_2610 PF00231 ATP synthase GFC29_2611 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC29_2611 PF00306 ATP synthase alpha/beta chain, C terminal domain GFC29_2611 PF02874 ATP synthase alpha/beta family, beta-barrel domain GFC29_2612 PF00213 ATP synthase delta (OSCP) subunit GFC29_2613 PF00430 ATP synthase B/B' CF(0) GFC29_2614 PF00137 ATP synthase subunit C GFC29_2615 PF00119 ATP synthase A chain GFC29_2616 PF03899 ATP synthase I chain GFC29_2619 PF00464 Serine hydroxymethyltransferase GFC29_262 PF02628 Cytochrome oxidase assembly protein GFC29_2620 PF04260 Protein of unknown function (DUF436) GFC29_2621 PF02502 Ribose/Galactose Isomerase GFC29_2622 PF02743 Cache domain GFC29_2622 PF00672 HAMP domain GFC29_2622 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_2623 PF01451 Low molecular weight phosphotyrosine protein phosphatase GFC29_2624 PF02659 Putative manganese efflux pump GFC29_2625 PF03481 Putative GTP-binding controlling metal-binding GFC29_2625 PF01300 Telomere recombination GFC29_2626 PF09551 Stage II sporulation protein R (spore_II_R) GFC29_2627 PF13847 Methyltransferase domain GFC29_2627 PF17827 PrmC N-terminal domain GFC29_2628 PF00472 RF-1 domain GFC29_2628 PF03462 PCRF domain GFC29_2629 PF00107 Zinc-binding dehydrogenase GFC29_2629 PF08240 Alcohol dehydrogenase GroES-like domain GFC29_263 PF01040 UbiA prenyltransferase family GFC29_2630 PF00171 Aldehyde dehydrogenase family GFC29_2631 PF02954 Bacterial regulatory protein, Fis family GFC29_2631 PF00072 Response regulator receiver domain GFC29_2631 PF00158 Sigma-54 interaction domain GFC29_2632 PF13188 PAS domain GFC29_2632 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_2632 PF00072 Response regulator receiver domain GFC29_2632 PF08448 PAS fold GFC29_2632 PF00512 His Kinase A (phospho-acceptor) domain GFC29_2633 PF00465 Iron-containing alcohol dehydrogenase GFC29_2635 PF00265 Thymidine kinase GFC29_2636 PF01197 Ribosomal protein L31 GFC29_2637 PF07497 Rho termination factor, RNA-binding domain GFC29_2637 PF07498 Rho termination factor, N-terminal domain GFC29_2637 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC29_2638 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GFC29_2639 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GFC29_264 PF00034 Cytochrome c GFC29_264 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GFC29_264 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GFC29_2640 PF00923 Transaldolase/Fructose-6-phosphate aldolase GFC29_2641 PF01116 Fructose-bisphosphate aldolase class-II GFC29_2642 PF00072 Response regulator receiver domain GFC29_2643 PF10740 Domain of unknown function (DUF2529) GFC29_2644 PF06418 CTP synthase N-terminus GFC29_2644 PF00117 Glutamine amidotransferase class-I GFC29_2645 PF05066 HB1, ASXL, restriction endonuclease HTH domain GFC29_2646 PF02310 B12 binding domain GFC29_2646 PF01642 Methylmalonyl-CoA mutase GFC29_2648 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC29_2648 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC29_2648 PF02770 Acyl-CoA dehydrogenase, middle domain GFC29_2649 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC29_2649 PF02770 Acyl-CoA dehydrogenase, middle domain GFC29_2649 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GFC29_265 PF00115 Cytochrome C and Quinol oxidase polypeptide I GFC29_2650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC29_2650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC29_2651 PF02803 Thiolase, C-terminal domain GFC29_2651 PF00108 Thiolase, N-terminal domain GFC29_2652 PF13183 4Fe-4S dicluster domain GFC29_2652 PF02754 Cysteine-rich domain GFC29_2653 PF13091 PLD-like domain GFC29_2655 PF05746 DALR anticodon binding domain GFC29_2655 PF00750 tRNA synthetases class I (R) GFC29_2655 PF03485 Arginyl tRNA synthetase N terminal domain GFC29_2656 PF09148 Domain of unknown function (DUF1934) GFC29_2657 PF00491 Arginase family GFC29_2659 PF00912 Transglycosylase GFC29_2659 PF00905 Penicillin binding protein transpeptidase domain GFC29_266 PF00510 Cytochrome c oxidase subunit III GFC29_2660 PF08741 YwhD family GFC29_2661 PF02163 Peptidase family M50 GFC29_2662 PF01361 Tautomerase enzyme GFC29_2663 PF00860 Permease family GFC29_2666 PF01966 HD domain GFC29_2667 PF07293 Protein of unknown function (DUF1450) GFC29_2669 PF03099 Biotin/lipoate A/B protein ligase family GFC29_267 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GFC29_2670 PF01515 Phosphate acetyl/butaryl transferase GFC29_2672 PF07486 Cell Wall Hydrolase GFC29_2673 PF09671 Spore coat protein (Spore_GerQ) GFC29_2674 PF04241 Protein of unknown function (DUF423) GFC29_2677 PF03167 Uracil DNA glycosylase superfamily GFC29_268 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GFC29_2680 PF03129 Anticodon binding domain GFC29_2680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC29_2681 PF00535 Glycosyl transferase family 2 GFC29_2682 PF07690 Major Facilitator Superfamily GFC29_2683 PF01546 Peptidase family M20/M25/M40 GFC29_2684 PF06018 CodY GAF-like domain GFC29_2684 PF17853 GGDEF-like domain GFC29_2684 PF13556 PucR C-terminal helix-turn-helix domain GFC29_2685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GFC29_2685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GFC29_2686 PF00474 Sodium:solute symporter family GFC29_2687 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC29_2688 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_2689 PF00005 ABC transporter GFC29_2690 PF03626 Prokaryotic Cytochrome C oxidase subunit IV GFC29_2691 PF00510 Cytochrome c oxidase subunit III GFC29_2692 PF00115 Cytochrome C and Quinol oxidase polypeptide I GFC29_2693 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GFC29_2694 PF00588 SpoU rRNA Methylase family GFC29_2694 PF12105 SpoU, rRNA methylase, C-terminal GFC29_2695 PF00005 ABC transporter GFC29_2696 PF12399 Branched-chain amino acid ATP-binding cassette transporter GFC29_2696 PF00005 ABC transporter GFC29_2697 PF02653 Branched-chain amino acid transport system / permease component GFC29_2697 PF11862 Domain of unknown function (DUF3382) GFC29_2698 PF02653 Branched-chain amino acid transport system / permease component GFC29_2699 PF13458 Periplasmic binding protein GFC29_2701 PF01266 FAD dependent oxidoreductase GFC29_2701 PF00355 Rieske [2Fe-2S] domain GFC29_2702 PF01235 Sodium:alanine symporter family GFC29_2703 PF02595 Glycerate kinase family GFC29_2704 PF01168 Alanine racemase, N-terminal domain GFC29_2706 PF01061 ABC-2 type transporter GFC29_2707 PF00005 ABC transporter GFC29_2707 PF13732 Domain of unknown function (DUF4162) GFC29_2708 PF07690 Major Facilitator Superfamily GFC29_2709 PF01047 MarR family GFC29_271 PF08868 YugN-like family GFC29_2710 PF01381 Helix-turn-helix GFC29_2711 PF02590 Predicted SPOUT methyltransferase GFC29_2713 PF13180 PDZ domain GFC29_2714 PF00753 Metallo-beta-lactamase superfamily GFC29_2715 PF09648 YycH protein GFC29_2716 PF07435 YycH protein GFC29_2717 PF00672 HAMP domain GFC29_2717 PF00512 His Kinase A (phospho-acceptor) domain GFC29_2717 PF13426 PAS domain GFC29_2717 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_2718 PF00072 Response regulator receiver domain GFC29_2718 PF00486 Transcriptional regulatory protein, C terminal GFC29_2719 PF00709 Adenylosuccinate synthetase GFC29_272 PF00188 Cysteine-rich secretory protein family GFC29_2720 PF03796 DnaB-like helicase C terminal domain GFC29_2720 PF00772 DnaB-like helicase N terminal domain GFC29_2721 PF03948 Ribosomal protein L9, C-terminal domain GFC29_2721 PF01281 Ribosomal protein L9, N-terminal domain GFC29_2722 PF02272 DHHA1 domain GFC29_2722 PF01368 DHH family GFC29_2723 PF09991 Predicted membrane protein (DUF2232) GFC29_2724 PF01084 Ribosomal protein S18 GFC29_2725 PF00436 Single-strand binding protein family GFC29_2726 PF01250 Ribosomal protein S6 GFC29_2727 PF06071 Protein of unknown function (DUF933) GFC29_2727 PF01926 50S ribosome-binding GTPase GFC29_2728 PF00384 Molybdopterin oxidoreductase GFC29_2728 PF01568 Molydopterin dinucleotide binding domain GFC29_2728 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GFC29_2729 PF06107 Bacterial protein of unknown function (DUF951) GFC29_273 PF00571 CBS domain GFC29_2730 PF00924 Mechanosensitive ion channel GFC29_2731 PF06866 Protein of unknown function (DUF1256) GFC29_2733 PF02195 ParB-like nuclease domain GFC29_2733 PF17762 HTH domain found in ParB protein GFC29_2734 PF13614 AAA domain GFC29_2735 PF02195 ParB-like nuclease domain GFC29_2735 PF17762 HTH domain found in ParB protein GFC29_2736 PF02527 rRNA small subunit methyltransferase G GFC29_2737 PF13932 GidA associated domain GFC29_2737 PF01134 Glucose inhibited division protein A GFC29_2738 PF01926 50S ribosome-binding GTPase GFC29_2738 PF12631 MnmE helical domain GFC29_2738 PF10396 GTP-binding protein TrmE N-terminus GFC29_2739 PF01424 R3H domain GFC29_2739 PF14804 Jag N-terminus GFC29_274 PF14504 CAP-associated N-terminal GFC29_274 PF00188 Cysteine-rich secretory protein family GFC29_2740 PF02096 60Kd inner membrane protein GFC29_2741 PF00825 Ribonuclease P GFC29_2742 PF00468 Ribosomal protein L34 GFC29_2743 PF00308 Bacterial dnaA protein GFC29_2743 PF08299 Bacterial dnaA protein helix-turn-helix GFC29_2743 PF11638 DnaA N-terminal domain GFC29_2744 PF00712 DNA polymerase III beta subunit, N-terminal domain GFC29_2744 PF02768 DNA polymerase III beta subunit, C-terminal domain GFC29_2744 PF02767 DNA polymerase III beta subunit, central domain GFC29_2746 PF02463 RecF/RecN/SMC N terminal domain GFC29_2747 PF00986 DNA gyrase B subunit, carboxyl terminus GFC29_2747 PF01751 Toprim domain GFC29_2747 PF00204 DNA gyrase B GFC29_2747 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_2748 PF03989 DNA gyrase C-terminal domain, beta-propeller GFC29_2748 PF00521 DNA gyrase/topoisomerase IV, subunit A GFC29_2749 PF11871 Domain of unknown function (DUF3391) GFC29_2749 PF01966 HD domain GFC29_275 PF14071 Putative coat protein GFC29_2758 PF14175 YaaC-like Protein GFC29_2759 PF00571 CBS domain GFC29_2759 PF00478 IMP dehydrogenase / GMP reductase domain GFC29_276 PF14003 YlbE-like protein GFC29_2760 PF00768 D-alanyl-D-alanine carboxypeptidase GFC29_2760 PF07943 Penicillin-binding protein 5, C-terminal domain GFC29_2761 PF01680 SOR/SNZ family GFC29_2762 PF01174 SNO glutamine amidotransferase family GFC29_2763 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC29_2763 PF02403 Seryl-tRNA synthetase N-terminal domain GFC29_2765 PF01712 Deoxynucleoside kinase GFC29_2766 PF01712 Deoxynucleoside kinase GFC29_2767 PF01476 LysM domain GFC29_2767 PF00704 Glycosyl hydrolases family 18 GFC29_2768 PF14437 MafB19-like deaminase GFC29_2769 PF12169 DNA polymerase III subunits gamma and tau domain III GFC29_2770 PF02575 YbaB/EbfC DNA-binding family GFC29_2771 PF02132 RecR protein GFC29_2771 PF13662 Toprim domain GFC29_2772 PF10704 Protein of unknown function (DUF2508) GFC29_2773 PF07441 SigmaK-factor processing regulatory protein BofA GFC29_278 PF06133 Control of competence regulator ComK, YlbF/YmcA GFC29_2780 PF13333 Integrase core domain GFC29_2780 PF13276 HTH-like domain GFC29_2780 PF00665 Integrase core domain GFC29_2781 PF13276 HTH-like domain GFC29_2781 PF13333 Integrase core domain GFC29_2781 PF00665 Integrase core domain GFC29_2783 PF01276 Orn/Lys/Arg decarboxylase, major domain GFC29_2783 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GFC29_2784 PF02223 Thymidylate kinase GFC29_2785 PF09115 DNA polymerase III, delta subunit, C terminal GFC29_2786 PF04468 PSP1 C-terminal conserved region GFC29_2787 PF06156 Initiation control protein YabA GFC29_2788 PF05175 Methyltransferase small domain GFC29_2789 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_279 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) GFC29_2790 PF18277 AbrB C-terminal domain GFC29_2790 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GFC29_2791 PF08264 Anticodon-binding domain of tRNA GFC29_2791 PF09334 tRNA synthetases class I (M) GFC29_2791 PF01588 Putative tRNA binding domain GFC29_2792 PF01026 TatD related DNase GFC29_2793 PF06725 3D domain GFC29_2793 PF03990 G5-linked-Ubiquitin-like domain GFC29_2793 PF07501 G5 domain GFC29_2794 PF13662 Toprim domain GFC29_2794 PF13331 Domain of unknown function (DUF4093) GFC29_2795 PF00398 Ribosomal RNA adenine dimethylase GFC29_2796 PF05582 YabG peptidase U57 GFC29_2797 PF06257 Biofilm formation stimulator VEG GFC29_2798 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC29_2799 PF00288 GHMP kinases N terminal domain GFC29_2799 PF08544 GHMP kinases C terminal GFC29_2800 PF00156 Phosphoribosyl transferase domain GFC29_2800 PF09182 Bacterial purine repressor, N-terminal GFC29_2801 PF01042 Endoribonuclease L-PSP GFC29_2802 PF04026 SpoVG GFC29_2803 PF00132 Bacterial transferase hexapeptide (six repeats) GFC29_2803 PF00483 Nucleotidyl transferase GFC29_2804 PF14572 Phosphoribosyl synthetase-associated domain GFC29_2804 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GFC29_2805 PF14693 Ribosomal protein TL5, C-terminal domain GFC29_2805 PF01386 Ribosomal L25p family GFC29_2806 PF01195 Peptidyl-tRNA hydrolase GFC29_2807 PF10955 Protein of unknown function (DUF2757) GFC29_2808 PF02559 CarD-like/TRCF domain GFC29_2808 PF00270 DEAD/DEAH box helicase GFC29_2808 PF00271 Helicase conserved C-terminal domain GFC29_2808 PF17757 UvrB interaction domain GFC29_2808 PF03461 TRCF domain GFC29_2809 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin GFC29_2809 PF15714 Stage V sporulation protein T C-terminal, transcription factor GFC29_2810 PF14667 Polysaccharide biosynthesis C-terminal domain GFC29_2810 PF01943 Polysaccharide biosynthesis protein GFC29_2811 PF03819 MazG nucleotide pyrophosphohydrolase domain GFC29_2811 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_2812 PF01479 S4 domain GFC29_2813 PF07873 YabP family GFC29_2814 PF09578 Spore cortex protein YabQ (Spore_YabQ) GFC29_2816 PF00575 S1 RNA binding domain GFC29_2819 PF07228 Stage II sporulation protein E (SpoIIE) GFC29_2820 PF00092 von Willebrand factor type A domain GFC29_2821 PF00069 Protein kinase domain GFC29_2822 PF11734 TilS substrate C-terminal domain GFC29_2822 PF09179 TilS substrate binding domain GFC29_2822 PF01171 PP-loop family GFC29_2824 PF01434 Peptidase family M41 GFC29_2824 PF06480 FtsH Extracellular GFC29_2824 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_2824 PF17862 AAA+ lid domain GFC29_2825 PF03309 Type III pantothenate kinase GFC29_2826 PF01430 Hsp33 protein GFC29_2827 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_2828 PF00425 chorismate binding enzyme GFC29_2828 PF04715 Anthranilate synthase component I, N terminal region GFC29_2829 PF00117 Glutamine amidotransferase class-I GFC29_283 PF01467 Cytidylyltransferase-like GFC29_2830 PF01063 Amino-transferase class IV GFC29_2831 PF00809 Pterin binding enzyme GFC29_2832 PF02152 Dihydroneopterin aldolase GFC29_2833 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GFC29_2834 PF01381 Helix-turn-helix GFC29_2835 PF01207 Dihydrouridine synthase (Dus) GFC29_2836 PF01336 OB-fold nucleic acid binding domain GFC29_2836 PF00152 tRNA synthetases class II (D, K and N) GFC29_284 PF01734 Patatin-like phospholipase GFC29_285 PF05636 HIGH Nucleotidyl Transferase GFC29_2857 PF17727 CtsR C-terminal dimerization domain GFC29_2857 PF05848 CtsR N-terminal HTH domain GFC29_2858 PF02151 UvrB/uvrC motif GFC29_2859 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain GFC29_286 PF13180 PDZ domain GFC29_286 PF05362 Lon protease (S16) C-terminal proteolytic domain GFC29_2860 PF07724 AAA domain (Cdc48 subfamily) GFC29_2860 PF10431 C-terminal, D2-small domain, of ClpB protein GFC29_2860 PF02861 Clp amino terminal domain, pathogenicity island component GFC29_2860 PF17871 AAA lid domain GFC29_2860 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_2861 PF18073 Rubredoxin metal binding domain GFC29_2863 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GFC29_2864 PF02542 YgbB family GFC29_2865 PF00749 tRNA synthetases class I (E and Q), catalytic domain GFC29_2866 PF00132 Bacterial transferase hexapeptide (six repeats) GFC29_2866 PF06426 Serine acetyltransferase, N-terminal GFC29_2867 PF01406 tRNA synthetases class I (C) catalytic domain GFC29_2867 PF09190 DALR domain GFC29_2868 PF00636 Ribonuclease III domain GFC29_2869 PF08032 RNA 2'-O ribose methyltransferase substrate binding GFC29_2869 PF00588 SpoU rRNA Methylase family GFC29_287 PF02620 Large ribosomal RNA subunit accumulation protein YceD GFC29_2870 PF05991 YacP-like NYN domain GFC29_2871 PF04542 Sigma-70 region 2 GFC29_2871 PF08281 Sigma-70, region 4 GFC29_2872 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GFC29_2873 PF00467 KOW motif GFC29_2873 PF02357 Transcription termination factor nusG GFC29_2874 PF00298 Ribosomal protein L11, RNA binding domain GFC29_2874 PF03946 Ribosomal protein L11, N-terminal domain GFC29_2875 PF00687 Ribosomal protein L1p/L10e family GFC29_2877 PF00466 Ribosomal protein L10 GFC29_2878 PF00542 Ribosomal protein L7/L12 C-terminal domain GFC29_2878 PF16320 Ribosomal protein L7/L12 dimerisation domain GFC29_2879 PF05175 Methyltransferase small domain GFC29_288 PF01783 Ribosomal L32p protein family GFC29_2880 PF04561 RNA polymerase Rpb2, domain 2 GFC29_2880 PF04565 RNA polymerase Rpb2, domain 3 GFC29_2880 PF04560 RNA polymerase Rpb2, domain 7 GFC29_2880 PF04563 RNA polymerase beta subunit GFC29_2880 PF10385 RNA polymerase beta subunit external 1 domain GFC29_2880 PF00562 RNA polymerase Rpb2, domain 6 GFC29_2881 PF04998 RNA polymerase Rpb1, domain 5 GFC29_2881 PF05000 RNA polymerase Rpb1, domain 4 GFC29_2881 PF04997 RNA polymerase Rpb1, domain 1 GFC29_2881 PF00623 RNA polymerase Rpb1, domain 2 GFC29_2881 PF04983 RNA polymerase Rpb1, domain 3 GFC29_2882 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GFC29_2883 PF00164 Ribosomal protein S12/S23 GFC29_2884 PF00177 Ribosomal protein S7p/S5e GFC29_2885 PF00009 Elongation factor Tu GTP binding domain GFC29_2885 PF03144 Elongation factor Tu domain 2 GFC29_2885 PF03764 Elongation factor G, domain IV GFC29_2885 PF00679 Elongation factor G C-terminus GFC29_2885 PF14492 Elongation Factor G, domain II GFC29_2886 PF00009 Elongation factor Tu GTP binding domain GFC29_2886 PF03144 Elongation factor Tu domain 2 GFC29_2886 PF03143 Elongation factor Tu C-terminal domain GFC29_2887 PF00338 Ribosomal protein S10p/S20e GFC29_2888 PF00297 Ribosomal protein L3 GFC29_2889 PF00573 Ribosomal protein L4/L1 family GFC29_289 PF00378 Enoyl-CoA hydratase/isomerase GFC29_2890 PF00276 Ribosomal protein L23 GFC29_2891 PF00181 Ribosomal Proteins L2, RNA binding domain GFC29_2891 PF03947 Ribosomal Proteins L2, C-terminal domain GFC29_2892 PF00203 Ribosomal protein S19 GFC29_2893 PF00237 Ribosomal protein L22p/L17e GFC29_2894 PF00189 Ribosomal protein S3, C-terminal domain GFC29_2894 PF07650 KH domain GFC29_2895 PF00252 Ribosomal protein L16p/L10e GFC29_2896 PF00831 Ribosomal L29 protein GFC29_2897 PF00366 Ribosomal protein S17 GFC29_2898 PF00238 Ribosomal protein L14p/L23e GFC29_2899 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GFC29_2899 PF00467 KOW motif GFC29_2900 PF00673 ribosomal L5P family C-terminus GFC29_2900 PF00281 Ribosomal protein L5 GFC29_2901 PF00253 Ribosomal protein S14p/S29e GFC29_2902 PF00410 Ribosomal protein S8 GFC29_2903 PF00347 Ribosomal protein L6 GFC29_2904 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GFC29_2905 PF03719 Ribosomal protein S5, C-terminal domain GFC29_2905 PF00333 Ribosomal protein S5, N-terminal domain GFC29_2906 PF00327 Ribosomal protein L30p/L7e GFC29_2907 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GFC29_2908 PF00344 SecY translocase GFC29_2909 PF05191 Adenylate kinase, active site lid GFC29_291 PF08546 Ketopantoate reductase PanE/ApbA C terminal GFC29_291 PF02558 Ketopantoate reductase PanE/ApbA GFC29_2910 PF00557 Metallopeptidase family M24 GFC29_2912 PF01176 Translation initiation factor 1A / IF-1 GFC29_2913 PF00444 Ribosomal protein L36 GFC29_2914 PF00416 Ribosomal protein S13/S18 GFC29_2915 PF00411 Ribosomal protein S11 GFC29_2916 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GFC29_2916 PF01000 RNA polymerase Rpb3/RpoA insert domain GFC29_2916 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GFC29_2917 PF01196 Ribosomal protein L17 GFC29_2918 PF00005 ABC transporter GFC29_2919 PF00005 ABC transporter GFC29_2921 PF01416 tRNA pseudouridine synthase GFC29_2922 PF00572 Ribosomal protein L13 GFC29_2923 PF00380 Ribosomal protein S9/S16 GFC29_2927 PF00535 Glycosyl transferase family 2 GFC29_2927 PF13181 Tetratricopeptide repeat GFC29_2929 PF13181 Tetratricopeptide repeat GFC29_2929 PF00535 Glycosyl transferase family 2 GFC29_293 PF10079 Bacillithiol biosynthesis BshC GFC29_2930 PF10730 Protein of unknown function (DUF2521) GFC29_2931 PF01520 N-acetylmuramoyl-L-alanine amidase GFC29_2932 PF10609 NUBPL iron-transfer P-loop NTPase GFC29_2933 PF17898 Spore germination GerD central core domain GFC29_2934 PF14089 KinB-signalling pathway activation in sporulation GFC29_2935 PF01522 Polysaccharide deacetylase GFC29_294 PF01795 MraW methylase family GFC29_295 PF04977 Septum formation initiator GFC29_2953 PF00491 Arginase family GFC29_2954 PF08281 Sigma-70, region 4 GFC29_2954 PF04542 Sigma-70 region 2 GFC29_2955 PF13490 Putative zinc-finger GFC29_2956 PF02457 DisA bacterial checkpoint controller nucleotide-binding GFC29_2957 PF07949 YbbR-like protein GFC29_2958 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GFC29_2958 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GFC29_2958 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GFC29_2958 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GFC29_2961 PF01380 SIS domain GFC29_2963 PF07690 Major Facilitator Superfamily GFC29_2964 PF03781 Sulfatase-modifying factor enzyme 1 GFC29_2967 PF01695 IstB-like ATP binding protein GFC29_2968 PF13419 Haloacid dehalogenase-like hydrolase GFC29_297 PF00905 Penicillin binding protein transpeptidase domain GFC29_297 PF03717 Penicillin-binding Protein dimerisation domain GFC29_297 PF03793 PASTA domain GFC29_2971 PF00583 Acetyltransferase (GNAT) family GFC29_2972 PF00795 Carbon-nitrogen hydrolase GFC29_2972 PF00583 Acetyltransferase (GNAT) family GFC29_2973 PF01638 HxlR-like helix-turn-helix GFC29_2975 PF11738 Protein of unknown function (DUF3298) GFC29_2975 PF01522 Polysaccharide deacetylase GFC29_2975 PF13739 Deacetylase PdaC GFC29_2978 PF00881 Nitroreductase family GFC29_2979 PF12833 Helix-turn-helix domain GFC29_2979 PF01497 Periplasmic binding protein GFC29_298 PF01225 Mur ligase family, catalytic domain GFC29_298 PF02875 Mur ligase family, glutamate ligase domain GFC29_298 PF08245 Mur ligase middle domain GFC29_2980 PF07690 Major Facilitator Superfamily GFC29_2981 PF00857 Isochorismatase family GFC29_2985 PF01546 Peptidase family M20/M25/M40 GFC29_2985 PF07687 Peptidase dimerisation domain GFC29_2986 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin GFC29_2987 PF08543 Phosphomethylpyrimidine kinase GFC29_2988 PF00106 short chain dehydrogenase GFC29_2989 PF00425 chorismate binding enzyme GFC29_2990 PF00501 AMP-binding enzyme GFC29_2990 PF13193 AMP-binding enzyme C-terminal domain GFC29_2991 PF00857 Isochorismatase family GFC29_2991 PF00550 Phosphopantetheine attachment site GFC29_2992 PF00550 Phosphopantetheine attachment site GFC29_2992 PF00668 Condensation domain GFC29_2992 PF13193 AMP-binding enzyme C-terminal domain GFC29_2992 PF00501 AMP-binding enzyme GFC29_2992 PF00975 Thioesterase domain GFC29_2993 PF03621 MbtH-like protein GFC29_2995 PF12833 Helix-turn-helix domain GFC29_2995 PF01497 Periplasmic binding protein GFC29_2996 PF01497 Periplasmic binding protein GFC29_2997 PF01032 FecCD transport family GFC29_2998 PF01032 FecCD transport family GFC29_2999 PF00881 Nitroreductase family GFC29_3 PF13580 SIS domain GFC29_300 PF00953 Glycosyl transferase family 4 GFC29_3000 PF00756 Putative esterase GFC29_3001 PF00756 Putative esterase GFC29_3002 PF01032 FecCD transport family GFC29_3003 PF01032 FecCD transport family GFC29_3004 PF01497 Periplasmic binding protein GFC29_3005 PF00005 ABC transporter GFC29_3006 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_3009 PF09278 MerR, DNA binding GFC29_3009 PF00376 MerR family regulatory protein GFC29_301 PF02875 Mur ligase family, glutamate ligase domain GFC29_301 PF08245 Mur ligase middle domain GFC29_3010 PF01323 DSBA-like thioredoxin domain GFC29_3011 PF00884 Sulfatase GFC29_3014 PF02386 Cation transport protein GFC29_3015 PF13520 Amino acid permease GFC29_3016 PF02659 Putative manganese efflux pump GFC29_3019 PF05163 DinB family GFC29_302 PF01098 Cell cycle protein GFC29_3020 PF01757 Acyltransferase family GFC29_3028 PF00196 Bacterial regulatory proteins, luxR family GFC29_3028 PF00072 Response regulator receiver domain GFC29_303 PF01565 FAD binding domain GFC29_303 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GFC29_3030 PF03033 Glycosyltransferase family 28 N-terminal domain GFC29_3030 PF04101 Glycosyltransferase family 28 C-terminal domain GFC29_3031 PF13739 Deacetylase PdaC GFC29_3031 PF01522 Polysaccharide deacetylase GFC29_3031 PF11738 Protein of unknown function (DUF3298) GFC29_3032 PF09335 SNARE associated Golgi protein GFC29_3033 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase GFC29_3034 PF01820 D-ala D-ala ligase N-terminus GFC29_3034 PF07478 D-ala D-ala ligase C-terminus GFC29_3035 PF01225 Mur ligase family, catalytic domain GFC29_3035 PF02875 Mur ligase family, glutamate ligase domain GFC29_3035 PF08245 Mur ligase middle domain GFC29_3036 PF12146 Serine aminopeptidase, S33 GFC29_3037 PF00271 Helicase conserved C-terminal domain GFC29_3037 PF00270 DEAD/DEAH box helicase GFC29_3038 PF01694 Rhomboid family GFC29_3039 PF01648 4'-phosphopantetheinyl transferase superfamily GFC29_304 PF08478 POTRA domain, FtsQ-type GFC29_3041 PF01168 Alanine racemase, N-terminal domain GFC29_3041 PF00842 Alanine racemase, C-terminal domain GFC29_3042 PF01402 Ribbon-helix-helix protein, copG family GFC29_3043 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system GFC29_3044 PF16921 Tex protein YqgF-like domain GFC29_3044 PF17674 HHH domain GFC29_3044 PF00575 S1 RNA binding domain GFC29_3044 PF09371 Tex-like protein N-terminal domain GFC29_3046 PF10263 SprT-like family GFC29_3046 PF17283 SprT-like zinc ribbon domain GFC29_305 PF05949 Bacterial protein of unknown function (DUF881) GFC29_306 PF05949 Bacterial protein of unknown function (DUF881) GFC29_3065 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GFC29_3066 PF00814 Glycoprotease family GFC29_3067 PF00583 Acetyltransferase (GNAT) family GFC29_3068 PF00814 Glycoprotease family GFC29_3069 PF16326 ABC transporter C-terminal domain GFC29_3069 PF00005 ABC transporter GFC29_3069 PF12848 ABC transporter GFC29_307 PF06947 Protein of unknown function (DUF1290) GFC29_3070 PF01967 MoaC family GFC29_3071 PF02629 CoA binding domain GFC29_3071 PF06971 Putative DNA-binding protein N-terminus GFC29_3072 PF02416 mttA/Hcf106 family GFC29_3073 PF00902 Sec-independent protein translocase protein (TatC) GFC29_3075 PF02517 CPBP intramembrane metalloprotease GFC29_3077 PF00166 Chaperonin 10 Kd subunit GFC29_3079 PF14659 Phage integrase, N-terminal SAM-like domain GFC29_3079 PF00589 Phage integrase family GFC29_308 PF02491 SHS2 domain inserted in FTSA GFC29_3084 PF03793 PASTA domain GFC29_3084 PF00069 Protein kinase domain GFC29_309 PF12327 FtsZ family, C-terminal domain GFC29_309 PF00091 Tubulin/FtsZ family, GTPase domain GFC29_3099 PF09588 YqaJ-like viral recombinase domain GFC29_310 PF03419 Sporulation factor SpoIIGA GFC29_3100 PF03837 RecT family GFC29_311 PF04542 Sigma-70 region 2 GFC29_311 PF04545 Sigma-70, region 4 GFC29_3115 PF10668 Phage terminase small subunit GFC29_3116 PF04466 Phage terminase large subunit GFC29_3116 PF17288 Terminase RNAseH like domain GFC29_3117 PF04860 Phage portal protein GFC29_3118 PF04233 Phage Mu protein F like protein GFC29_312 PF04545 Sigma-70, region 4 GFC29_312 PF04539 Sigma-70 region 3 GFC29_312 PF04542 Sigma-70 region 2 GFC29_3120 PF14550 Putative phage serine protease XkdF GFC29_3123 PF11436 Protein of unknown function (DUF3199) GFC29_3124 PF12206 Domain of unknown function (DUF3599) GFC29_3125 PF04883 Bacteriophage HK97-gp10, putative tail-component GFC29_3127 PF17482 Phage tail sheath C-terminal domain GFC29_3127 PF17481 Phage tail sheath protein beta-sandwich domain GFC29_3127 PF04984 Phage tail sheath protein subtilisin-like domain GFC29_3128 PF09393 Phage tail tube protein GFC29_3129 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC GFC29_313 PF05239 PRC-barrel domain GFC29_3130 PF01464 Transglycosylase SLT domain GFC29_3131 PF01476 LysM domain GFC29_3133 PF10844 Protein of unknown function (DUF2577) GFC29_3134 PF10934 Protein of unknown function (DUF2634) GFC29_3135 PF04865 Baseplate J-like protein GFC29_3143 PF05036 Sporulation related domain GFC29_3143 PF01520 N-acetylmuramoyl-L-alanine amidase GFC29_3146 PF13276 HTH-like domain GFC29_3146 PF00665 Integrase core domain GFC29_3146 PF13333 Integrase core domain GFC29_3147 PF01527 Transposase GFC29_3149 PF00082 Subtilase family GFC29_315 PF01168 Alanine racemase, N-terminal domain GFC29_3153 PF07726 ATPase family associated with various cellular activities (AAA) GFC29_3153 PF17863 AAA lid domain GFC29_3154 PF01882 Protein of unknown function DUF58 GFC29_3155 PF01841 Transglutaminase-like superfamily GFC29_3155 PF13559 Domain of unknown function (DUF4129) GFC29_3155 PF11992 Domain of unknown function (DUF3488) GFC29_3156 PF02540 NAD synthase GFC29_3156 PF00117 Glutamine amidotransferase class-I GFC29_3156 PF00958 GMP synthase C terminal domain GFC29_3157 PF00860 Permease family GFC29_3158 PF13302 Acetyltransferase (GNAT) domain GFC29_316 PF04472 Cell division protein SepF GFC29_3166 PF00731 AIR carboxylase GFC29_3167 PF02222 ATP-grasp domain GFC29_3167 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GFC29_3168 PF10397 Adenylosuccinate lyase C-terminus GFC29_3168 PF00206 Lyase GFC29_3169 PF01259 SAICAR synthetase GFC29_317 PF02325 YGGT family GFC29_3170 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase GFC29_3172 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GFC29_3172 PF00586 AIR synthase related protein, N-terminal domain GFC29_3172 PF02769 AIR synthase related protein, C-terminal domain GFC29_3173 PF00156 Phosphoribosyl transferase domain GFC29_3174 PF02769 AIR synthase related protein, C-terminal domain GFC29_3174 PF00586 AIR synthase related protein, N-terminal domain GFC29_3175 PF00551 Formyl transferase GFC29_3176 PF01808 AICARFT/IMPCHase bienzyme GFC29_3176 PF02142 MGS-like domain GFC29_3178 PF02844 Phosphoribosylglycinamide synthetase, N domain GFC29_3178 PF02843 Phosphoribosylglycinamide synthetase, C domain GFC29_3178 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GFC29_3179 PF01979 Amidohydrolase family GFC29_3179 PF13382 Adenine deaminase C-terminal domain GFC29_318 PF17774 Putative RNA-binding domain in YlmH GFC29_318 PF01479 S4 domain GFC29_3180 PF17479 Protein of unknown function (DUF3048) C-terminal domain GFC29_3180 PF11258 Protein of unknown function (DUF3048) N-terminal domain GFC29_3181 PF01371 Trp repressor protein GFC29_3182 PF01884 PcrB family GFC29_3183 PF00580 UvrD/REP helicase N-terminal domain GFC29_3183 PF13361 UvrD-like helicase C-terminal domain GFC29_3184 PF12826 Helix-hairpin-helix motif GFC29_3184 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GFC29_3184 PF01653 NAD-dependent DNA ligase adenylation domain GFC29_3184 PF00533 BRCA1 C Terminus (BRCT) domain GFC29_3184 PF03120 NAD-dependent DNA ligase OB-fold domain GFC29_3185 PF07537 CamS sex pheromone cAM373 precursor GFC29_3186 PF00171 Aldehyde dehydrogenase family GFC29_3188 PF00072 Response regulator receiver domain GFC29_3188 PF00196 Bacterial regulatory proteins, luxR family GFC29_319 PF05103 DivIVA protein GFC29_3191 PF00005 ABC transporter GFC29_3194 PF00158 Sigma-54 interaction domain GFC29_3194 PF02954 Bacterial regulatory protein, Fis family GFC29_3194 PF01590 GAF domain GFC29_3195 PF00676 Dehydrogenase E1 component GFC29_3196 PF02779 Transketolase, pyrimidine binding domain GFC29_3196 PF02780 Transketolase, C-terminal domain GFC29_3197 PF02817 e3 binding domain GFC29_3197 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC29_3197 PF00364 Biotin-requiring enzyme GFC29_3198 PF01522 Polysaccharide deacetylase GFC29_3199 PF00483 Nucleotidyl transferase GFC29_320 PF08264 Anticodon-binding domain of tRNA GFC29_320 PF00133 tRNA synthetases class I (I, L, M and V) GFC29_320 PF06827 Zinc finger found in FPG and IleRS GFC29_3204 PF00535 Glycosyl transferase family 2 GFC29_3205 PF13382 Adenine deaminase C-terminal domain GFC29_3205 PF01979 Amidohydrolase family GFC29_3206 PF02686 Glu-tRNAGln amidotransferase C subunit GFC29_3207 PF01425 Amidase GFC29_3208 PF02637 GatB domain GFC29_3208 PF02934 GatB/GatE catalytic domain GFC29_3209 PF04069 Substrate binding domain of ABC-type glycine betaine transport system GFC29_321 PF01252 Signal peptidase (SPase) II GFC29_3210 PF00571 CBS domain GFC29_3210 PF00005 ABC transporter GFC29_3211 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3216 PF18019 HD domain GFC29_3216 PF18395 Cas3 C-terminal domain GFC29_3218 PF01867 CRISPR associated protein Cas1 GFC29_3219 PF09827 CRISPR associated protein Cas2 GFC29_322 PF01479 S4 domain GFC29_322 PF00849 RNA pseudouridylate synthase GFC29_3226 PF00005 ABC transporter GFC29_3226 PF08402 TOBE domain GFC29_3227 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3228 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3229 PF13416 Bacterial extracellular solute-binding protein GFC29_323 PF00156 Phosphoribosyl transferase domain GFC29_3233 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_3233 PF13426 PAS domain GFC29_3233 PF00512 His Kinase A (phospho-acceptor) domain GFC29_3233 PF00672 HAMP domain GFC29_3234 PF00072 Response regulator receiver domain GFC29_3234 PF00486 Transcriptional regulatory protein, C terminal GFC29_3236 PF15975 Flotillin GFC29_3236 PF01145 SPFH domain / Band 7 family GFC29_324 PF00860 Permease family GFC29_3241 PF00781 Diacylglycerol kinase catalytic domain GFC29_3242 PF01938 TRAM domain GFC29_3242 PF05958 tRNA (Uracil-5-)-methyltransferase GFC29_3242 PF02475 Met-10+ like-protein GFC29_3245 PF04397 LytTr DNA-binding domain GFC29_3245 PF00072 Response regulator receiver domain GFC29_3246 PF06580 Histidine kinase GFC29_3246 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_3247 PF04203 Sortase domain GFC29_3248 PF01872 RibD C-terminal domain GFC29_325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GFC29_325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GFC29_3254 PF00005 ABC transporter GFC29_3255 PF01435 Peptidase family M48 GFC29_3257 PF00440 Bacterial regulatory proteins, tetR family GFC29_3257 PF17922 Tetracyclin repressor-like, C-terminal domain GFC29_326 PF01979 Amidohydrolase family GFC29_3261 PF12704 MacB-like periplasmic core domain GFC29_3261 PF02687 FtsX-like permease family GFC29_3261 PF00005 ABC transporter GFC29_3263 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain GFC29_3263 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain GFC29_3267 PF13180 PDZ domain GFC29_3268 PF00324 Amino acid permease GFC29_3269 PF02898 Nitric oxide synthase, oxygenase domain GFC29_327 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GFC29_327 PF00117 Glutamine amidotransferase class-I GFC29_3270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GFC29_3270 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GFC29_3271 PF17202 Single cache domain 3 GFC29_3271 PF00672 HAMP domain GFC29_3271 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_3272 PF13667 ThiC-associated domain GFC29_3272 PF01964 Radical SAM ThiC family GFC29_3273 PF01799 [2Fe-2S] binding domain GFC29_3273 PF00111 2Fe-2S iron-sulfur cluster binding domain GFC29_3275 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase GFC29_3275 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain GFC29_3276 PF12804 MobA-like NTP transferase domain GFC29_3277 PF13478 XdhC Rossmann domain GFC29_3277 PF02625 XdhC and CoxI family GFC29_328 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC29_328 PF02142 MGS-like domain GFC29_328 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GFC29_3280 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_3281 PF09021 HutP GFC29_3282 PF00221 Aromatic amino acid lyase GFC29_3283 PF17391 Urocanase N-terminal domain GFC29_3283 PF17392 Urocanase C-terminal domain GFC29_3283 PF01175 Urocanase Rossmann-like domain GFC29_3284 PF07969 Amidohydrolase family GFC29_3285 PF03741 Integral membrane protein TerC family GFC29_3286 PF02589 LUD domain GFC29_3287 PF02589 LUD domain GFC29_3287 PF13183 4Fe-4S dicluster domain GFC29_3287 PF11870 Domain of unknown function (DUF3390) GFC29_3288 PF02754 Cysteine-rich domain GFC29_3289 PF00392 Bacterial regulatory proteins, gntR family GFC29_3289 PF07729 FCD domain GFC29_329 PF00175 Oxidoreductase NAD-binding domain GFC29_329 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B GFC29_3290 PF02652 L-lactate permease GFC29_3291 PF02913 FAD linked oxidases, C-terminal domain GFC29_3291 PF01565 FAD binding domain GFC29_3292 PF02754 Cysteine-rich domain GFC29_3292 PF13183 4Fe-4S dicluster domain GFC29_3293 PF00877 NlpC/P60 family GFC29_3293 PF01476 LysM domain GFC29_3294 PF00563 EAL domain GFC29_3294 PF00498 FHA domain GFC29_3294 PF00990 Diguanylate cyclase, GGDEF domain GFC29_3295 PF09350 Domain of unknown function (DUF1992) GFC29_3297 PF14824 Sirohaem biosynthesis protein central GFC29_3298 PF02585 GlcNAc-PI de-N-acetylase GFC29_3299 PF08830 Protein of unknown function (DUF1806) GFC29_330 PF01180 Dihydroorotate dehydrogenase GFC29_3301 PF00708 Acylphosphatase GFC29_3302 PF01903 CbiX GFC29_3303 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_3305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GFC29_3305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GFC29_3307 PF14306 PUA-like domain GFC29_3307 PF01747 ATP-sulfurylase GFC29_3308 PF01384 Phosphate transporter family GFC29_3309 PF01507 Phosphoadenosine phosphosulfate reductase family GFC29_331 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GFC29_3311 PF06569 Protein of unknown function (DUF1128) GFC29_3312 PF01451 Low molecular weight phosphotyrosine protein phosphatase GFC29_3314 PF03631 Virulence factor BrkB GFC29_3316 PF07690 Major Facilitator Superfamily GFC29_3318 PF01699 Sodium/calcium exchanger protein GFC29_3319 PF14167 YfkD-like protein GFC29_332 PF00156 Phosphoribosyl transferase domain GFC29_3321 PF08756 YfkB-like domain GFC29_3321 PF04055 Radical SAM superfamily GFC29_3323 PF05681 Fumarate hydratase (Fumerase) GFC29_3323 PF05683 Fumarase C-terminus GFC29_3324 PF01522 Polysaccharide deacetylase GFC29_3325 PF00730 HhH-GPD superfamily base excision DNA repair protein GFC29_3326 PF05958 tRNA (Uracil-5-)-methyltransferase GFC29_3326 PF01938 TRAM domain GFC29_3329 PF00664 ABC transporter transmembrane region GFC29_3329 PF00005 ABC transporter GFC29_3329 PF03412 Peptidase C39 family GFC29_3339 PF07282 Putative transposase DNA-binding domain GFC29_3339 PF01385 Probable transposase GFC29_3339 PF12323 Helix-turn-helix domain GFC29_3340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GFC29_3349 PF00209 Sodium:neurotransmitter symporter family GFC29_335 PF00689 Cation transporting ATPase, C-terminus GFC29_335 PF00690 Cation transporter/ATPase, N-terminus GFC29_3353 PF03972 MmgE/PrpD family GFC29_3354 PF00285 Citrate synthase, C-terminal domain GFC29_3356 PF01717 Cobalamin-independent synthase, Catalytic domain GFC29_3356 PF08267 Cobalamin-independent synthase, N-terminal domain GFC29_3357 PF03061 Thioesterase superfamily GFC29_3359 PF00072 Response regulator receiver domain GFC29_3359 PF00196 Bacterial regulatory proteins, luxR family GFC29_336 PF08340 Domain of unknown function (DUF1732) GFC29_336 PF03755 YicC-like family, N-terminal region GFC29_3364 PF01979 Amidohydrolase family GFC29_3365 PF01370 NAD dependent epimerase/dehydratase family GFC29_3365 PF08338 Domain of unknown function (DUF1731) GFC29_3366 PF02631 RecX family GFC29_3367 PF00106 short chain dehydrogenase GFC29_3368 PF08838 Protein of unknown function (DUF1811) GFC29_337 PF04025 Domain of unknown function (DUF370) GFC29_3370 PF08176 Small acid-soluble spore protein K family GFC29_3371 PF14043 WVELL protein GFC29_3373 PF04307 LexA-binding, inner membrane-associated putative hydrolase GFC29_3374 PF14815 NUDIX domain GFC29_3374 PF00730 HhH-GPD superfamily base excision DNA repair protein GFC29_3374 PF00633 Helix-hairpin-helix motif GFC29_3378 PF14182 YgaB-like protein GFC29_3379 PF04167 Protein of unknown function (DUF402) GFC29_338 PF00625 Guanylate kinase GFC29_3380 PF00005 ABC transporter GFC29_3380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC29_3381 PF00005 ABC transporter GFC29_3381 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC29_3382 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GFC29_3386 PF06081 Aromatic acid exporter family member 1 GFC29_339 PF01192 RNA polymerase Rpb6 GFC29_3390 PF01493 GXGXG motif GFC29_3390 PF01645 Conserved region in glutamate synthase GFC29_3390 PF04898 Glutamate synthase central domain GFC29_3390 PF00310 Glutamine amidotransferases class-II GFC29_3391 PF00202 Aminotransferase class-III GFC29_3392 PF00005 ABC transporter GFC29_3395 PF07885 Ion channel GFC29_3396 PF00578 AhpC/TSA family GFC29_3397 PF01475 Ferric uptake regulator family GFC29_3398 PF11023 Zinc-ribbon containing domain GFC29_3399 PF18576 Helix-turn-helix domain GFC29_3399 PF14540 Nucleotidyltransferase-like GFC29_340 PF02441 Flavoprotein GFC29_340 PF04127 DNA / pantothenate metabolism flavoprotein GFC29_341 PF00271 Helicase conserved C-terminal domain GFC29_341 PF18074 Primosomal protein N C-terminal domain GFC29_341 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GFC29_341 PF04851 Type III restriction enzyme, res subunit GFC29_341 PF17764 3′ DNA-binding domain (3′BD) GFC29_342 PF01327 Polypeptide deformylase GFC29_343 PF00551 Formyl transferase GFC29_343 PF02911 Formyl transferase, C-terminal domain GFC29_3430 PF08331 Domain of unknown function (DUF1730) GFC29_3431 PF12671 Putative amidase domain GFC29_3432 PF00588 SpoU rRNA Methylase family GFC29_3434 PF08298 PrkA AAA domain GFC29_3434 PF06798 PrkA serine protein kinase C-terminal domain GFC29_3435 PF04285 Protein of unknown function (DUF444) GFC29_3436 PF10502 Signal peptidase, peptidase S26 GFC29_3438 PF00005 ABC transporter GFC29_3439 PF12704 MacB-like periplasmic core domain GFC29_3439 PF00005 ABC transporter GFC29_3439 PF02687 FtsX-like permease family GFC29_344 PF01189 16S rRNA methyltransferase RsmB/F GFC29_344 PF01029 NusB family GFC29_3440 PF00672 HAMP domain GFC29_3440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_3440 PF00512 His Kinase A (phospho-acceptor) domain GFC29_3442 PF00072 Response regulator receiver domain GFC29_3442 PF04703 FaeA-like protein GFC29_3443 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GFC29_3443 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_3443 PF17203 Single cache domain 3 GFC29_3444 PF03480 Bacterial extracellular solute-binding protein, family 7 GFC29_3445 PF00375 Sodium:dicarboxylate symporter family GFC29_3446 PF17954 Quercetinase C-terminal cupin domain GFC29_3446 PF02678 Pirin GFC29_3447 PF03358 NADPH-dependent FMN reductase GFC29_3448 PF00248 Aldo/keto reductase family GFC29_345 PF04055 Radical SAM superfamily GFC29_3450 PF01385 Probable transposase GFC29_3450 PF12323 Helix-turn-helix domain GFC29_3450 PF07282 Putative transposase DNA-binding domain GFC29_3451 PF04298 Putative neutral zinc metallopeptidase GFC29_3452 PF03471 Transporter associated domain GFC29_3452 PF00571 CBS domain GFC29_3452 PF01595 Cyclin M transmembrane N-terminal domain GFC29_3453 PF01479 S4 domain GFC29_3453 PF00849 RNA pseudouridylate synthase GFC29_3454 PF17326 Family of unknown function (DUF5365) GFC29_3456 PF02600 Disulfide bond formation protein DsbB GFC29_3458 PF00571 CBS domain GFC29_3459 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GFC29_3459 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GFC29_3459 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GFC29_3459 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GFC29_3460 PF00106 short chain dehydrogenase GFC29_3461 PF13185 GAF domain GFC29_3461 PF07730 Histidine kinase GFC29_3462 PF00072 Response regulator receiver domain GFC29_3462 PF00196 Bacterial regulatory proteins, luxR family GFC29_3463 PF03358 NADPH-dependent FMN reductase GFC29_3465 PF14148 YhdB-like protein GFC29_3467 PF09335 SNARE associated Golgi protein GFC29_3469 PF08141 Small acid-soluble spore protein H family GFC29_347 PF03793 PASTA domain GFC29_347 PF00069 Protein kinase domain GFC29_3471 PF04293 SpoVR like protein GFC29_3474 PF02583 Metal-sensitive transcriptional repressor GFC29_3475 PF01206 Sulfurtransferase TusA GFC29_3476 PF13686 DsrE/DsrF/DrsH-like family GFC29_3479 PF01206 Sulfurtransferase TusA GFC29_3479 PF00581 Rhodanese-like domain GFC29_348 PF16745 RsgA N-terminal domain GFC29_348 PF03193 RsgA GTPase GFC29_3480 PF00581 Rhodanese-like domain GFC29_3480 PF00753 Metallo-beta-lactamase superfamily GFC29_3481 PF01925 Sulfite exporter TauE/SafE GFC29_3482 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFC29_3483 PF00258 Flavodoxin GFC29_3485 PF03741 Integral membrane protein TerC family GFC29_3486 PF00268 Ribonucleotide reductase, small chain GFC29_3487 PF02867 Ribonucleotide reductase, barrel domain GFC29_3487 PF00317 Ribonucleotide reductase, all-alpha domain GFC29_3487 PF03477 ATP cone domain GFC29_3489 PF13722 5TM C-terminal transporter carbon starvation CstA GFC29_3489 PF02554 Carbon starvation protein CstA GFC29_349 PF00834 Ribulose-phosphate 3 epimerase family GFC29_3490 PF04328 Selenoprotein, putative GFC29_3491 PF08546 Ketopantoate reductase PanE/ApbA C terminal GFC29_3491 PF02558 Ketopantoate reductase PanE/ApbA GFC29_3492 PF00128 Alpha amylase, catalytic domain GFC29_3492 PF16657 Maltogenic Amylase, C-terminal domain GFC29_3493 PF12867 DinB superfamily GFC29_3494 PF17785 PUA-like domain GFC29_3494 PF10672 S-adenosylmethionine-dependent methyltransferase GFC29_3495 PF03070 TENA/THI-4/PQQC family GFC29_3497 PF00005 ABC transporter GFC29_3498 PF02361 Cobalt transport protein GFC29_3499 PF02581 Thiamine monophosphate synthase GFC29_35 PF11188 Protein of unknown function (DUF2975) GFC29_350 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain GFC29_350 PF04263 Thiamin pyrophosphokinase, catalytic domain GFC29_3500 PF01266 FAD dependent oxidoreductase GFC29_3501 PF02597 ThiS family GFC29_3502 PF05690 Thiazole biosynthesis protein ThiG GFC29_3503 PF00899 ThiF family GFC29_3505 PF01595 Cyclin M transmembrane N-terminal domain GFC29_3505 PF03471 Transporter associated domain GFC29_3505 PF00571 CBS domain GFC29_3506 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC29_3507 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3508 PF00005 ABC transporter GFC29_3509 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC29_351 PF00830 Ribosomal L28 family GFC29_3511 PF17912 MalK OB fold domain GFC29_3511 PF00005 ABC transporter GFC29_3511 PF03459 TOBE domain GFC29_3512 PF13556 PucR C-terminal helix-turn-helix domain GFC29_3515 PF04286 Protein of unknown function (DUF445) GFC29_3516 PF06133 Control of competence regulator ComK, YlbF/YmcA GFC29_3518 PF04055 Radical SAM superfamily GFC29_352 PF03780 Asp23 family, cell envelope-related function GFC29_3520 PF13732 Domain of unknown function (DUF4162) GFC29_3520 PF00005 ABC transporter GFC29_3522 PF01966 HD domain GFC29_3522 PF01336 OB-fold nucleic acid binding domain GFC29_3523 PF14147 Sporulation protein YhaL GFC29_3524 PF00266 Aminotransferase class-V GFC29_3525 PF17099 Tryptophan transporter TrpP GFC29_3528 PF01047 MarR family GFC29_353 PF13684 Dihydroxyacetone kinase family GFC29_353 PF02734 DAK2 domain GFC29_3530 PF05698 Bacterial trigger factor protein (TF) C-terminus GFC29_3531 PF01230 HIT domain GFC29_3532 PF00005 ABC transporter GFC29_3533 PF05975 Bacterial ABC transporter protein EcsB GFC29_3534 PF03992 Antibiotic biosynthesis monooxygenase GFC29_3536 PF07687 Peptidase dimerisation domain GFC29_3536 PF01546 Peptidase family M20/M25/M40 GFC29_3537 PF01208 Uroporphyrinogen decarboxylase (URO-D) GFC29_354 PF01842 ACT domain GFC29_354 PF03315 Serine dehydratase beta chain GFC29_3540 PF17932 Tetracyclin repressor-like, C-terminal domain GFC29_3540 PF00440 Bacterial regulatory proteins, tetR family GFC29_3542 PF00356 Bacterial regulatory proteins, lacI family GFC29_3543 PF01547 Bacterial extracellular solute-binding protein GFC29_3544 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3545 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3546 PF14149 YhfH-like protein GFC29_3547 PF12706 Beta-lactamase superfamily domain GFC29_3548 PF13193 AMP-binding enzyme C-terminal domain GFC29_3548 PF00501 AMP-binding enzyme GFC29_3549 PF03591 AzlC protein GFC29_355 PF03313 Serine dehydratase alpha chain GFC29_3552 PF01435 Peptidase family M48 GFC29_3552 PF16491 CAAX prenyl protease N-terminal, five membrane helices GFC29_3553 PF00463 Isocitrate lyase family GFC29_3556 PF06338 ComK protein GFC29_3557 PF09335 SNARE associated Golgi protein GFC29_3558 PF10502 Signal peptidase, peptidase S26 GFC29_3559 PF13361 UvrD-like helicase C-terminal domain GFC29_3559 PF12705 PD-(D/E)XK nuclease superfamily GFC29_356 PF17191 RecG wedge domain GFC29_356 PF00271 Helicase conserved C-terminal domain GFC29_356 PF00270 DEAD/DEAH box helicase GFC29_3560 PF13361 UvrD-like helicase C-terminal domain GFC29_3560 PF12705 PD-(D/E)XK nuclease superfamily GFC29_3560 PF00580 UvrD/REP helicase N-terminal domain GFC29_3561 PF00149 Calcineurin-like phosphoesterase GFC29_3561 PF12320 Type 5 capsule protein repressor C-terminal domain GFC29_3562 PF13476 AAA domain GFC29_3566 PF10737 Spore germination protein GerPC GFC29_3567 PF10803 Spore germination GerPB GFC29_3568 PF10676 Spore germination protein gerPA/gerPF GFC29_357 PF01575 MaoC like domain GFC29_357 PF08279 HTH domain GFC29_3571 PF00501 AMP-binding enzyme GFC29_3571 PF13193 AMP-binding enzyme C-terminal domain GFC29_3572 PF04235 Protein of unknown function (DUF418) GFC29_3573 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC29_3574 PF00202 Aminotransferase class-III GFC29_3575 PF07457 Protein of unknown function (DUF1516) GFC29_3577 PF00733 Asparagine synthase GFC29_3577 PF13537 Glutamine amidotransferase domain GFC29_3578 PF01554 MatE GFC29_3579 PF12833 Helix-turn-helix domain GFC29_3579 PF02311 AraC-like ligand binding domain GFC29_358 PF02504 Fatty acid synthesis protein GFC29_3580 PF16657 Maltogenic Amylase, C-terminal domain GFC29_3580 PF02903 Alpha amylase, N-terminal ig-like domain GFC29_3580 PF00128 Alpha amylase, catalytic domain GFC29_3581 PF13416 Bacterial extracellular solute-binding protein GFC29_3582 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3583 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3584 PF02903 Alpha amylase, N-terminal ig-like domain GFC29_3584 PF00128 Alpha amylase, catalytic domain GFC29_3585 PF13802 Galactose mutarotase-like GFC29_3585 PF17137 Domain of unknown function (DUF5110) GFC29_3585 PF16338 Domain of unknown function (DUF4968) GFC29_3585 PF01055 Glycosyl hydrolases family 31 GFC29_3586 PF00356 Bacterial regulatory proteins, lacI family GFC29_3588 PF02574 Homocysteine S-methyltransferase GFC29_3588 PF00809 Pterin binding enzyme GFC29_3588 PF02965 Vitamin B12 dependent methionine synthase, activation domain GFC29_3588 PF02607 B12 binding domain GFC29_3588 PF02310 B12 binding domain GFC29_3589 PF02219 Methylenetetrahydrofolate reductase GFC29_3589 PF02574 Homocysteine S-methyltransferase GFC29_359 PF00698 Acyl transferase domain GFC29_3590 PF04461 Protein of unknown function (DUF520) GFC29_3591 PF13509 S1 domain GFC29_3591 PF17783 CvfB-like winged helix domain GFC29_3593 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_3593 PF02743 Cache domain GFC29_3593 PF00672 HAMP domain GFC29_3596 PF00005 ABC transporter GFC29_3597 PF07730 Histidine kinase GFC29_3598 PF00072 Response regulator receiver domain GFC29_3598 PF00196 Bacterial regulatory proteins, luxR family GFC29_36 PF13443 Cro/C1-type HTH DNA-binding domain GFC29_3600 PF02645 Uncharacterised protein, DegV family COG1307 GFC29_3601 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC29_3601 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC29_3604 PF00326 Prolyl oligopeptidase family GFC29_3605 PF12804 MobA-like NTP transferase domain GFC29_3606 PF06463 Molybdenum Cofactor Synthesis C GFC29_3606 PF04055 Radical SAM superfamily GFC29_3607 PF00994 Probable molybdopterin binding domain GFC29_3607 PF03454 MoeA C-terminal region (domain IV) GFC29_3607 PF03453 MoeA N-terminal region (domain I and II) GFC29_3608 PF03205 Molybdopterin guanine dinucleotide synthesis protein B GFC29_3609 PF02391 MoaE protein GFC29_361 PF00550 Phosphopantetheine attachment site GFC29_3610 PF02597 ThiS family GFC29_3611 PF01118 Semialdehyde dehydrogenase, NAD binding domain GFC29_3611 PF02774 Semialdehyde dehydrogenase, dimerisation domain GFC29_3612 PF01960 ArgJ family GFC29_3613 PF00696 Amino acid kinase family GFC29_3614 PF00202 Aminotransferase class-III GFC29_3615 PF00117 Glutamine amidotransferase class-I GFC29_3615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GFC29_3616 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GFC29_3616 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GFC29_3617 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GFC29_3617 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GFC29_3618 PF14168 YjzC-like protein GFC29_3619 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_3619 PF10431 C-terminal, D2-small domain, of ClpB protein GFC29_3619 PF07724 AAA domain (Cdc48 subfamily) GFC29_3619 PF17871 AAA lid domain GFC29_3619 PF02861 Clp amino terminal domain, pathogenicity island component GFC29_362 PF14622 Ribonuclease-III-like GFC29_362 PF00035 Double-stranded RNA binding motif GFC29_3624 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GFC29_3624 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GFC29_3625 PF02801 Beta-ketoacyl synthase, C-terminal domain GFC29_3625 PF00109 Beta-ketoacyl synthase, N-terminal domain GFC29_3626 PF10026 Predicted Zn-dependent protease (DUF2268) GFC29_3628 PF12227 Protein of unknown function (DUF3603) GFC29_3629 PF00579 tRNA synthetases class I (W and Y) GFC29_363 PF06470 SMC proteins Flexible Hinge Domain GFC29_363 PF02463 RecF/RecN/SMC N terminal domain GFC29_3630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GFC29_3631 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3632 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_3632 PF12911 N-terminal TM domain of oligopeptide transport permease C GFC29_3633 PF00005 ABC transporter GFC29_3633 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC29_3634 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC29_3634 PF00005 ABC transporter GFC29_3636 PF03960 ArsC family GFC29_3637 PF03741 Integral membrane protein TerC family GFC29_3638 PF05389 Negative regulator of genetic competence (MecA) GFC29_3639 PF13396 Phospholipase_D-nuclease N-terminal GFC29_3639 PF13091 PLD-like domain GFC29_364 PF02881 SRP54-type protein, helical bundle domain GFC29_364 PF00448 SRP54-type protein, GTPase domain GFC29_3641 PF01432 Peptidase family M3 GFC29_3641 PF08439 Oligopeptidase F GFC29_3644 PF01152 Bacterial-like globin GFC29_3645 PF01464 Transglycosylase SLT domain GFC29_3646 PF01928 CYTH domain GFC29_3648 PF04607 Region found in RelA / SpoT proteins GFC29_3649 PF01513 ATP-NAD kinase GFC29_365 PF04297 Putative helix-turn-helix protein, YlxM / p13 like GFC29_3650 PF00849 RNA pseudouridylate synthase GFC29_3651 PF00149 Calcineurin-like phosphoesterase GFC29_3652 PF01098 Cell cycle protein GFC29_3655 PF01636 Phosphotransferase enzyme family GFC29_3656 PF13439 Glycosyltransferase Family 4 GFC29_3656 PF00534 Glycosyl transferases group 1 GFC29_3657 PF00534 Glycosyl transferases group 1 GFC29_3657 PF13439 Glycosyltransferase Family 4 GFC29_3658 PF01370 NAD dependent epimerase/dehydratase family GFC29_3659 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GFC29_3659 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GFC29_3659 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GFC29_366 PF02881 SRP54-type protein, helical bundle domain GFC29_366 PF00448 SRP54-type protein, GTPase domain GFC29_366 PF02978 Signal peptide binding domain GFC29_3668 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GFC29_3669 PF07451 Stage V sporulation protein AD (SpoVAD) GFC29_367 PF00886 Ribosomal protein S16 GFC29_3670 PF03862 SpoVAC/SpoVAEB sporulation membrane protein GFC29_3672 PF04239 Protein of unknown function (DUF421) GFC29_3674 PF00085 Thioredoxin GFC29_3677 PF14069 Stage VI sporulation protein F GFC29_3678 PF00580 UvrD/REP helicase N-terminal domain GFC29_3678 PF13361 UvrD-like helicase C-terminal domain GFC29_3681 PF13673 Acetyltransferase (GNAT) domain GFC29_3683 PF00756 Putative esterase GFC29_3684 PF13426 PAS domain GFC29_3684 PF00158 Sigma-54 interaction domain GFC29_3684 PF02954 Bacterial regulatory protein, Fis family GFC29_3688 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC29_3689 PF01053 Cys/Met metabolism PLP-dependent enzyme GFC29_369 PF11068 YlqD protein GFC29_3691 PF03601 Conserved hypothetical protein 698 GFC29_3692 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_3692 PF03466 LysR substrate binding domain GFC29_3694 PF01966 HD domain GFC29_3696 PF14659 Phage integrase, N-terminal SAM-like domain GFC29_3696 PF00589 Phage integrase family GFC29_37 PF05675 Protein of unknown function (DUF817) GFC29_370 PF01782 RimM N-terminal domain GFC29_370 PF05239 PRC-barrel domain GFC29_3701 PF00589 Phage integrase family GFC29_3701 PF02899 Phage integrase, N-terminal SAM-like domain GFC29_371 PF01746 tRNA (Guanine-1)-methyltransferase GFC29_3719 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_372 PF01245 Ribosomal protein L19 GFC29_3720 PF00005 ABC transporter GFC29_3729 PF13520 Amino acid permease GFC29_373 PF10502 Signal peptidase, peptidase S26 GFC29_3730 PF00512 His Kinase A (phospho-acceptor) domain GFC29_3730 PF13426 PAS domain GFC29_3730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_3730 PF00672 HAMP domain GFC29_3731 PF00486 Transcriptional regulatory protein, C terminal GFC29_3731 PF00072 Response regulator receiver domain GFC29_3733 PF01476 LysM domain GFC29_3733 PF00877 NlpC/P60 family GFC29_3739 PF07454 Stage II sporulation protein P (SpoIIP) GFC29_374 PF01926 50S ribosome-binding GTPase GFC29_3740 PF13333 Integrase core domain GFC29_3740 PF13276 HTH-like domain GFC29_3740 PF00665 Integrase core domain GFC29_3742 PF00578 AhpC/TSA family GFC29_3745 PF01790 Prolipoprotein diacylglyceryl transferase GFC29_3746 PF01209 ubiE/COQ5 methyltransferase family GFC29_375 PF01351 Ribonuclease HII GFC29_3751 PF01545 Cation efflux family GFC29_3751 PF16916 Dimerisation domain of Zinc Transporter GFC29_3752 PF01566 Natural resistance-associated macrophage protein GFC29_3756 PF02374 Anion-transporting ATPase GFC29_3758 PF13411 MerR HTH family regulatory protein GFC29_3759 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_3759 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GFC29_3759 PF00403 Heavy-metal-associated domain GFC29_3761 PF02583 Metal-sensitive transcriptional repressor GFC29_3762 PF00403 Heavy-metal-associated domain GFC29_3763 PF00403 Heavy-metal-associated domain GFC29_3764 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) GFC29_3766 PF00486 Transcriptional regulatory protein, C terminal GFC29_3766 PF00072 Response regulator receiver domain GFC29_3767 PF00512 His Kinase A (phospho-acceptor) domain GFC29_3767 PF00989 PAS fold GFC29_3767 PF18698 Histidine kinase sensor domain GFC29_3767 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_3767 PF00672 HAMP domain GFC29_377 PF01312 FlhB HrpN YscU SpaS Family GFC29_3773 PF05140 ResB-like family GFC29_3774 PF01578 Cytochrome C assembly protein GFC29_3775 PF00578 AhpC/TSA family GFC29_3776 PF02683 Cytochrome C biogenesis protein transmembrane region GFC29_3778 PF01695 IstB-like ATP binding protein GFC29_3779 PF00665 Integrase core domain GFC29_3779 PF02796 Helix-turn-helix domain of resolvase GFC29_378 PF08442 ATP-grasp domain GFC29_378 PF00549 CoA-ligase GFC29_3780 PF00394 Multicopper oxidase GFC29_3780 PF07731 Multicopper oxidase GFC29_3780 PF07732 Multicopper oxidase GFC29_3781 PF13529 Peptidase_C39 like family GFC29_3782 PF00733 Asparagine synthase GFC29_3782 PF13537 Glutamine amidotransferase domain GFC29_3786 PF00069 Protein kinase domain GFC29_3786 PF03793 PASTA domain GFC29_379 PF00549 CoA-ligase GFC29_379 PF02629 CoA binding domain GFC29_3793 PF00293 NUDIX domain GFC29_3794 PF04851 Type III restriction enzyme, res subunit GFC29_3794 PF08463 EcoEI R protein C-terminal GFC29_3794 PF00271 Helicase conserved C-terminal domain GFC29_3794 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) GFC29_3795 PF00248 Aldo/keto reductase family GFC29_38 PF00005 ABC transporter GFC29_380 PF02481 DNA recombination-mediator protein A GFC29_3800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC29_3801 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC29_3802 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_3803 PF03611 PTS system sugar-specific permease component GFC29_3804 PF02126 Phosphotriesterase family GFC29_381 PF01131 DNA topoisomerase GFC29_381 PF01751 Toprim domain GFC29_381 PF01396 Topoisomerase DNA binding C4 zinc finger GFC29_382 PF01134 Glucose inhibited division protein A GFC29_3821 PF01510 N-acetylmuramoyl-L-alanine amidase GFC29_3821 PF01471 Putative peptidoglycan binding domain GFC29_383 PF00589 Phage integrase family GFC29_383 PF02899 Phage integrase, N-terminal SAM-like domain GFC29_3838 PF00589 Phage integrase family GFC29_3838 PF02899 Phage integrase, N-terminal SAM-like domain GFC29_384 PF00227 Proteasome subunit GFC29_3844 PF01381 Helix-turn-helix GFC29_385 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_385 PF07724 AAA domain (Cdc48 subfamily) GFC29_385 PF10431 C-terminal, D2-small domain, of ClpB protein GFC29_3853 PF03838 Recombination protein U GFC29_386 PF08222 CodY helix-turn-helix domain GFC29_386 PF06018 CodY GAF-like domain GFC29_3866 PF01555 DNA methylase GFC29_3869 PF02899 Phage integrase, N-terminal SAM-like domain GFC29_3869 PF00589 Phage integrase family GFC29_387 PF00460 Flagella basal body rod protein GFC29_3871 PF04466 Phage terminase large subunit GFC29_3871 PF17288 Terminase RNAseH like domain GFC29_3872 PF04860 Phage portal protein GFC29_388 PF00460 Flagella basal body rod protein GFC29_388 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC29_389 PF02049 Flagellar hook-basal body complex protein FliE GFC29_39 PF01032 FecCD transport family GFC29_390 PF08345 Flagellar M-ring protein C-terminal GFC29_390 PF01514 Secretory protein of YscJ/FliF family GFC29_391 PF14842 FliG N-terminal domain GFC29_391 PF14841 FliG middle domain GFC29_391 PF01706 FliG C-terminal domain GFC29_392 PF02108 Flagellar assembly protein FliH GFC29_393 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GFC29_393 PF02874 ATP synthase alpha/beta family, beta-barrel domain GFC29_393 PF18269 T3SS EscN ATPase C-terminal domain GFC29_394 PF02050 Flagellar FliJ protein GFC29_396 PF02120 Flagellar hook-length control protein FliK GFC29_397 PF03963 Flagellar hook capping protein - N-terminal region GFC29_398 PF00460 Flagella basal body rod protein GFC29_398 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GFC29_399 PF06289 Flagellar and Swarming motility proteins GFC29_40 PF01032 FecCD transport family GFC29_400 PF03748 Flagellar basal body-associated protein FliL GFC29_401 PF02154 Flagellar motor switch protein FliM GFC29_401 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GFC29_402 PF04509 CheC-like family GFC29_402 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GFC29_403 PF00072 Response regulator receiver domain GFC29_404 PF04347 Flagellar biosynthesis protein, FliO GFC29_405 PF00813 FliP family GFC29_406 PF01313 Bacterial export proteins, family 3 GFC29_407 PF01311 Bacterial export proteins, family 1 GFC29_408 PF01312 FlhB HrpN YscU SpaS Family GFC29_409 PF00771 FHIPEP family GFC29_410 PF00448 SRP54-type protein, GTPase domain GFC29_411 PF10609 NUBPL iron-transfer P-loop NTPase GFC29_412 PF01339 CheB methylesterase GFC29_412 PF00072 Response regulator receiver domain GFC29_413 PF07194 P2 response regulator binding domain GFC29_413 PF01627 Hpt domain GFC29_413 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_413 PF02895 Signal transducing histidine kinase, homodimeric domain GFC29_413 PF01584 CheW-like domain GFC29_414 PF01584 CheW-like domain GFC29_415 PF04509 CheC-like family GFC29_416 PF03975 CheD chemotactic sensory transduction GFC29_418 PF04542 Sigma-70 region 2 GFC29_418 PF04545 Sigma-70, region 4 GFC29_418 PF04539 Sigma-70 region 3 GFC29_42 PF00465 Iron-containing alcohol dehydrogenase GFC29_421 PF00318 Ribosomal protein S2 GFC29_422 PF00889 Elongation factor TS GFC29_423 PF00696 Amino acid kinase family GFC29_424 PF01765 Ribosome recycling factor GFC29_425 PF01255 Putative undecaprenyl diphosphate synthase GFC29_427 PF13288 DXP reductoisomerase C-terminal domain GFC29_427 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GFC29_427 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GFC29_428 PF02163 Peptidase family M50 GFC29_428 PF13180 PDZ domain GFC29_429 PF03129 Anticodon binding domain GFC29_429 PF04073 Aminoacyl-tRNA editing domain GFC29_429 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GFC29_430 PF02811 PHP domain GFC29_430 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GFC29_430 PF14579 Helix-hairpin-helix motif GFC29_430 PF07733 Bacterial DNA polymerase III alpha NTPase domain GFC29_430 PF11490 DNA polymerase III polC-type N-terminus II GFC29_430 PF00929 Exonuclease GFC29_430 PF14480 DNA polymerase III polC-type N-terminus I GFC29_431 PF02576 RimP N-terminal domain GFC29_431 PF17384 RimP C-terminal SH3 domain GFC29_432 PF08529 NusA N-terminal domain GFC29_432 PF00575 S1 RNA binding domain GFC29_432 PF13184 NusA-like KH domain GFC29_433 PF04296 Protein of unknown function (DUF448) GFC29_434 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GFC29_435 PF00009 Elongation factor Tu GTP binding domain GFC29_435 PF04760 Translation initiation factor IF-2, N-terminal region GFC29_435 PF11987 Translation-initiation factor 2 GFC29_436 PF04456 Protein of unknown function (DUF503) GFC29_437 PF02033 Ribosome-binding factor A GFC29_438 PF01509 TruB family pseudouridylate synthase (N terminal domain) GFC29_438 PF16198 tRNA pseudouridylate synthase B C-terminal domain GFC29_439 PF01687 Riboflavin kinase GFC29_439 PF06574 FAD synthetase GFC29_440 PF00312 Ribosomal protein S15 GFC29_441 PF03725 3' exoribonuclease family, domain 2 GFC29_441 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GFC29_441 PF00575 S1 RNA binding domain GFC29_441 PF00013 KH domain GFC29_441 PF01138 3' exoribonuclease family, domain 1 GFC29_442 PF01522 Polysaccharide deacetylase GFC29_443 PF05193 Peptidase M16 inactive domain GFC29_443 PF00675 Insulinase (Peptidase family M16) GFC29_444 PF05239 PRC-barrel domain GFC29_445 PF16924 Dipicolinate synthase subunit A N-terminal domain GFC29_445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GFC29_446 PF02441 Flavoprotein GFC29_447 PF01118 Semialdehyde dehydrogenase, NAD binding domain GFC29_447 PF02774 Semialdehyde dehydrogenase, dimerisation domain GFC29_448 PF13840 ACT domain GFC29_448 PF00696 Amino acid kinase family GFC29_449 PF00701 Dihydrodipicolinate synthetase family GFC29_450 PF17770 Ribonuclease J C-terminal domain GFC29_450 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GFC29_450 PF00753 Metallo-beta-lactamase superfamily GFC29_451 PF00574 Clp protease GFC29_452 PF14035 YlzJ-like protein GFC29_453 PF17854 FtsK alpha domain GFC29_453 PF09397 Ftsk gamma domain GFC29_453 PF01580 FtsK/SpoIIIE family GFC29_454 PF07702 UTRA domain GFC29_454 PF00392 Bacterial regulatory proteins, gntR family GFC29_459 PF05193 Peptidase M16 inactive domain GFC29_460 PF00675 Insulinase (Peptidase family M16) GFC29_460 PF05193 Peptidase M16 inactive domain GFC29_462 PF11588 Protein of unknown function (DUF3243) GFC29_463 PF11868 Protein of unknown function (DUF3388) GFC29_464 PF13464 Domain of unknown function (DUF4115) GFC29_465 PF01066 CDP-alcohol phosphatidyltransferase GFC29_466 PF18146 Damage-inducible protein CinA KH domain GFC29_466 PF02464 Competence-damaged protein GFC29_466 PF00994 Probable molybdopterin binding domain GFC29_467 PF00154 recA bacterial DNA recombination protein GFC29_468 PF00154 recA bacterial DNA recombination protein GFC29_469 PF12072 Domain of unknown function (DUF3552) GFC29_469 PF01966 HD domain GFC29_469 PF00013 KH domain GFC29_47 PF04960 Glutaminase GFC29_470 PF13277 YmdB-like protein GFC29_471 PF04232 Stage V sporulation protein S (SpoVS) GFC29_473 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GFC29_473 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GFC29_473 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GFC29_474 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GFC29_475 PF04055 Radical SAM superfamily GFC29_475 PF00919 Uncharacterized protein family UPF0004 GFC29_475 PF01938 TRAM domain GFC29_476 PF06133 Control of competence regulator ComK, YlbF/YmcA GFC29_478 PF10628 Outer spore coat protein E (CotE) GFC29_479 PF05190 MutS family domain IV GFC29_479 PF05188 MutS domain II GFC29_479 PF05192 MutS domain III GFC29_479 PF00488 MutS domain V GFC29_479 PF01624 MutS domain I GFC29_480 PF08676 MutL C terminal dimerisation domain GFC29_480 PF01119 DNA mismatch repair protein, C-terminal domain GFC29_481 PF01380 SIS domain GFC29_481 PF01418 Helix-turn-helix domain, rpiR family GFC29_482 PF00367 phosphotransferase system, EIIB GFC29_482 PF02378 Phosphotransferase system, EIIC GFC29_484 PF13580 SIS domain GFC29_487 PF00188 Cysteine-rich secretory protein family GFC29_488 PF00005 ABC transporter GFC29_488 PF13732 Domain of unknown function (DUF4162) GFC29_49 PF00293 NUDIX domain GFC29_493 PF03734 L,D-transpeptidase catalytic domain GFC29_493 PF01476 LysM domain GFC29_495 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) GFC29_495 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 GFC29_496 PF13115 YtkA-like GFC29_496 PF05425 Copper resistance protein D GFC29_496 PF04234 CopC domain GFC29_497 PF07987 Domain of unkown function (DUF1775) GFC29_498 PF02525 Flavodoxin-like fold GFC29_499 PF00457 Glycosyl hydrolases family 11 GFC29_499 PF01522 Polysaccharide deacetylase GFC29_499 PF03422 Carbohydrate binding module (family 6) GFC29_500 PF13171 Protein of unknown function (DUF4004) GFC29_501 PF04519 Polymer-forming cytoskeletal GFC29_502 PF04519 Polymer-forming cytoskeletal GFC29_503 PF07690 Major Facilitator Superfamily GFC29_504 PF07690 Major Facilitator Superfamily GFC29_505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_505 PF12729 Four helix bundle sensory module for signal transduction GFC29_505 PF00672 HAMP domain GFC29_507 PF17209 Hfq protein GFC29_508 PF00004 ATPase family associated with various cellular activities (AAA) GFC29_508 PF17866 AAA lid domain GFC29_509 PF13193 AMP-binding enzyme C-terminal domain GFC29_509 PF00501 AMP-binding enzyme GFC29_51 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_51 PF03466 LysR substrate binding domain GFC29_511 PF02515 CoA-transferase family III GFC29_512 PF00501 AMP-binding enzyme GFC29_512 PF13193 AMP-binding enzyme C-terminal domain GFC29_513 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GFC29_513 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GFC29_514 PF02803 Thiolase, C-terminal domain GFC29_514 PF00108 Thiolase, N-terminal domain GFC29_515 PF03458 UPF0126 domain GFC29_516 PF16360 GTP-binding GTPase Middle Region GFC29_516 PF13167 GTP-binding GTPase N-terminal GFC29_516 PF01926 50S ribosome-binding GTPase GFC29_517 PF06838 Methionine gamma-lyase GFC29_518 PF13411 MerR HTH family regulatory protein GFC29_519 PF03951 Glutamine synthetase, beta-Grasp domain GFC29_519 PF00120 Glutamine synthetase, catalytic domain GFC29_52 PF00701 Dihydrodipicolinate synthetase family GFC29_520 PF01230 HIT domain GFC29_521 PF00872 Transposase, Mutator family GFC29_522 PF01551 Peptidase family M23 GFC29_526 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GFC29_526 PF13457 GW (Gly-Tryp) dipeptide domain GFC29_527 PF01476 LysM domain GFC29_527 PF05257 CHAP domain GFC29_53 PF00171 Aldehyde dehydrogenase family GFC29_536 PF01726 LexA DNA binding domain GFC29_536 PF00717 Peptidase S24-like GFC29_537 PF01476 LysM domain GFC29_538 PF00239 Resolvase, N terminal domain GFC29_539 PF05979 Bacterial protein of unknown function (DUF896) GFC29_54 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal GFC29_54 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal GFC29_540 PF00456 Transketolase, thiamine diphosphate binding domain GFC29_540 PF02779 Transketolase, pyrimidine binding domain GFC29_540 PF02780 Transketolase, C-terminal domain GFC29_542 PF03672 Uncharacterised protein family (UPF0154) GFC29_543 PF09388 Spo0E like sporulation regulatory protein GFC29_544 PF02683 Cytochrome C biogenesis protein transmembrane region GFC29_545 PF00072 Response regulator receiver domain GFC29_546 PF07301 Protein of unknown function (DUF1453) GFC29_547 PF11084 Protein of unknown function (DUF2621) GFC29_548 PF07486 Cell Wall Hydrolase GFC29_549 PF08179 Small acid-soluble spore protein P family GFC29_55 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFC29_552 PF00330 Aconitase family (aconitate hydratase) GFC29_552 PF00694 Aconitase C-terminal domain GFC29_554 PF02681 Divergent PAP2 family GFC29_557 PF13456 Reverse transcriptase-like GFC29_558 PF13456 Reverse transcriptase-like GFC29_559 PF10782 Zinc-finger GFC29_56 PF01613 Flavin reductase like domain GFC29_560 PF00313 'Cold-shock' DNA-binding domain GFC29_564 PF03707 Bacterial signalling protein N terminal repeat GFC29_564 PF00563 EAL domain GFC29_564 PF00990 Diguanylate cyclase, GGDEF domain GFC29_565 PF13407 Periplasmic binding protein domain GFC29_566 PF02743 Cache domain GFC29_566 PF00672 HAMP domain GFC29_566 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_566 PF06580 Histidine kinase GFC29_567 PF04397 LytTr DNA-binding domain GFC29_567 PF00072 Response regulator receiver domain GFC29_568 PF13407 Periplasmic binding protein domain GFC29_569 PF00005 ABC transporter GFC29_57 PF01687 Riboflavin kinase GFC29_57 PF06574 FAD synthetase GFC29_570 PF02653 Branched-chain amino acid transport system / permease component GFC29_572 PF02743 Cache domain GFC29_572 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_572 PF00672 HAMP domain GFC29_573 PF00005 ABC transporter GFC29_573 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC29_574 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GFC29_574 PF00005 ABC transporter GFC29_575 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_576 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_577 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GFC29_579 PF03611 PTS system sugar-specific permease component GFC29_582 PF17853 GGDEF-like domain GFC29_582 PF13556 PucR C-terminal helix-turn-helix domain GFC29_583 PF00171 Aldehyde dehydrogenase family GFC29_584 PF01619 Proline dehydrogenase GFC29_585 PF07690 Major Facilitator Superfamily GFC29_589 PF00491 Arginase family GFC29_59 PF04341 Protein of unknown function, DUF485 GFC29_591 PF00474 Sodium:solute symporter family GFC29_592 PF02694 Uncharacterised BCR, YnfA/UPF0060 family GFC29_593 PF17676 LD-carboxypeptidase C-terminal domain GFC29_593 PF02016 LD-carboxypeptidase N-terminal domain GFC29_594 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC29_594 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC29_595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC29_595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC29_596 PF01261 Xylose isomerase-like TIM barrel GFC29_597 PF01081 KDPG and KHG aldolase GFC29_598 PF00294 pfkB family carbohydrate kinase GFC29_599 PF06445 GyrI-like small molecule binding domain GFC29_599 PF13411 MerR HTH family regulatory protein GFC29_60 PF00474 Sodium:solute symporter family GFC29_601 PF01266 FAD dependent oxidoreductase GFC29_605 PF07228 Stage II sporulation protein E (SpoIIE) GFC29_605 PF13426 PAS domain GFC29_609 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_61 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC29_610 PF00753 Metallo-beta-lactamase superfamily GFC29_612 PF07875 Coat F domain GFC29_616 PF01022 Bacterial regulatory protein, arsR family GFC29_618 PF08818 Domain of unknown function (DU1801) GFC29_619 PF00583 Acetyltransferase (GNAT) family GFC29_62 PF01557 Fumarylacetoacetate (FAA) hydrolase family GFC29_620 PF00356 Bacterial regulatory proteins, lacI family GFC29_620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GFC29_622 PF01047 MarR family GFC29_622 PF00583 Acetyltransferase (GNAT) family GFC29_623 PF00356 Bacterial regulatory proteins, lacI family GFC29_624 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC29_624 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC29_625 PF02447 GntP family permease GFC29_626 PF00324 Amino acid permease GFC29_628 PF03466 LysR substrate binding domain GFC29_628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_629 PF04898 Glutamate synthase central domain GFC29_629 PF01645 Conserved region in glutamate synthase GFC29_629 PF00310 Glutamine amidotransferases class-II GFC29_629 PF01493 GXGXG motif GFC29_63 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase GFC29_630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GFC29_630 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_635 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GFC29_635 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GFC29_635 PF07992 Pyridine nucleotide-disulphide oxidoreductase GFC29_636 PF01180 Dihydroorotate dehydrogenase GFC29_637 PF01979 Amidohydrolase family GFC29_639 PF07905 Purine catabolism regulatory protein-like family GFC29_639 PF13556 PucR C-terminal helix-turn-helix domain GFC29_639 PF17853 GGDEF-like domain GFC29_64 PF06039 Malate:quinone oxidoreductase (Mqo) GFC29_640 PF00171 Aldehyde dehydrogenase family GFC29_641 PF00202 Aminotransferase class-III GFC29_643 PF02146 Sir2 family GFC29_644 PF17932 Tetracyclin repressor-like, C-terminal domain GFC29_644 PF00440 Bacterial regulatory proteins, tetR family GFC29_645 PF00266 Aminotransferase class-V GFC29_646 PF04199 Putative cyclase GFC29_647 PF03301 Tryptophan 2,3-dioxygenase GFC29_648 PF01810 LysE type translocator GFC29_649 PF00072 Response regulator receiver domain GFC29_649 PF08664 YcbB domain GFC29_65 PF10787 Uncharacterised protein from bacillus cereus group GFC29_650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_651 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_652 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_653 PF00497 Bacterial extracellular solute-binding proteins, family 3 GFC29_654 PF00005 ABC transporter GFC29_655 PF07293 Protein of unknown function (DUF1450) GFC29_657 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_657 PF05227 CHASE3 domain GFC29_657 PF00672 HAMP domain GFC29_658 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_659 PF00171 Aldehyde dehydrogenase family GFC29_661 PF12833 Helix-turn-helix domain GFC29_661 PF06445 GyrI-like small molecule binding domain GFC29_663 PF02743 Cache domain GFC29_663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_663 PF00672 HAMP domain GFC29_663 PF06580 Histidine kinase GFC29_664 PF12833 Helix-turn-helix domain GFC29_664 PF00072 Response regulator receiver domain GFC29_665 PF13407 Periplasmic binding protein domain GFC29_666 PF00005 ABC transporter GFC29_667 PF02653 Branched-chain amino acid transport system / permease component GFC29_668 PF00392 Bacterial regulatory proteins, gntR family GFC29_669 PF00596 Class II Aldolase and Adducin N-terminal domain GFC29_67 PF00392 Bacterial regulatory proteins, gntR family GFC29_67 PF00155 Aminotransferase class I and II GFC29_670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC29_670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC29_671 PF02610 L-arabinose isomerase GFC29_671 PF11762 L-arabinose isomerase C-terminal domain GFC29_672 PF07385 D-lyxose isomerase GFC29_673 PF13407 Periplasmic binding protein domain GFC29_674 PF00005 ABC transporter GFC29_675 PF02653 Branched-chain amino acid transport system / permease component GFC29_676 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GFC29_676 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GFC29_677 PF01263 Aldose 1-epimerase GFC29_678 PF00248 Aldo/keto reductase family GFC29_679 PF00480 ROK family GFC29_68 PF00795 Carbon-nitrogen hydrolase GFC29_680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_680 PF00672 HAMP domain GFC29_680 PF06580 Histidine kinase GFC29_680 PF02743 Cache domain GFC29_681 PF00072 Response regulator receiver domain GFC29_681 PF12833 Helix-turn-helix domain GFC29_682 PF01547 Bacterial extracellular solute-binding protein GFC29_683 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_684 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_685 PF03512 Glycosyl hydrolase family 52 GFC29_686 PF00331 Glycosyl hydrolase family 10 GFC29_687 PF00331 Glycosyl hydrolase family 10 GFC29_689 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_69 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GFC29_690 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_691 PF03648 Glycosyl hydrolase family 67 N-terminus GFC29_691 PF07488 Glycosyl hydrolase family 67 middle domain GFC29_691 PF07477 Glycosyl hydrolase family 67 C-terminus GFC29_692 PF01229 Glycosyl hydrolases family 39 GFC29_694 PF07729 FCD domain GFC29_694 PF00392 Bacterial regulatory proteins, gntR family GFC29_695 PF02614 Glucuronate isomerase GFC29_696 PF03786 D-mannonate dehydratase (UxuA) GFC29_697 PF00106 short chain dehydrogenase GFC29_698 PF04854 Protein of unknown function, DUF624 GFC29_700 PF13472 GDSL-like Lipase/Acylhydrolase family GFC29_701 PF00150 Cellulase (glycosyl hydrolase family 5) GFC29_702 PF01261 Xylose isomerase-like TIM barrel GFC29_703 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GFC29_703 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GFC29_704 PF00440 Bacterial regulatory proteins, tetR family GFC29_708 PF00378 Enoyl-CoA hydratase/isomerase GFC29_709 PF03060 Nitronate monooxygenase GFC29_71 PF03816 Cell envelope-related transcriptional attenuator domain GFC29_710 PF06580 Histidine kinase GFC29_710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_710 PF07694 5TMR of 5TMR-LYT GFC29_711 PF04397 LytTr DNA-binding domain GFC29_711 PF00072 Response regulator receiver domain GFC29_714 PF13411 MerR HTH family regulatory protein GFC29_715 PF03553 Na+/H+ antiporter family GFC29_716 PF04231 Endonuclease I GFC29_717 PF17248 Family of unknown function (DUF5317) GFC29_718 PF01966 HD domain GFC29_719 PF00455 DeoR C terminal sensor domain GFC29_719 PF08220 DeoR-like helix-turn-helix domain GFC29_72 PF01381 Helix-turn-helix GFC29_720 PF00294 pfkB family carbohydrate kinase GFC29_721 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GFC29_721 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC29_722 PF03773 Predicted permease GFC29_723 PF09323 Domain of unknown function (DUF1980) GFC29_724 PF12706 Beta-lactamase superfamily domain GFC29_725 PF00557 Metallopeptidase family M24 GFC29_726 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_726 PF00512 His Kinase A (phospho-acceptor) domain GFC29_726 PF00989 PAS fold GFC29_726 PF08447 PAS fold GFC29_728 PF02602 Uroporphyrinogen-III synthase HemD GFC29_73 PF17763 Glutaminase/Asparaginase C-terminal domain GFC29_73 PF00710 Asparaginase, N-terminal GFC29_732 PF02096 60Kd inner membrane protein GFC29_733 PF01432 Peptidase family M3 GFC29_733 PF08439 Oligopeptidase F GFC29_737 PF03109 ABC1 family GFC29_738 PF03737 Aldolase/RraA GFC29_74 PF10415 Fumarase C C-terminus GFC29_74 PF00206 Lyase GFC29_740 PF01891 Cobalt uptake substrate-specific transmembrane region GFC29_741 PF02553 Cobalt transport protein component CbiN GFC29_743 PF00005 ABC transporter GFC29_744 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_744 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GFC29_745 PF01903 CbiX GFC29_746 PF02571 Precorrin-6x reductase CbiJ/CobK GFC29_747 PF02570 Precorrin-8X methylmutase GFC29_748 PF01888 CbiD GFC29_749 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_75 PF03949 Malic enzyme, NAD binding domain GFC29_75 PF00390 Malic enzyme, N-terminal domain GFC29_750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_751 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_752 PF01890 Cobalamin synthesis G C-terminus GFC29_752 PF11761 Cobalamin biosynthesis central region GFC29_752 PF11760 Cobalamin synthesis G N-terminal GFC29_753 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GFC29_753 PF07685 CobB/CobQ-like glutamine amidotransferase domain GFC29_754 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GFC29_754 PF07685 CobB/CobQ-like glutamine amidotransferase domain GFC29_755 PF02277 Phosphoribosyltransferase GFC29_756 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GFC29_757 PF12557 Cob(I)alamin adenosyltransferase N terminal GFC29_757 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GFC29_758 PF08241 Methyltransferase domain GFC29_759 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GFC29_76 PF01638 HxlR-like helix-turn-helix GFC29_760 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GFC29_761 PF04204 Homoserine O-succinyltransferase GFC29_762 PF01268 Formate--tetrahydrofolate ligase GFC29_764 PF00255 Glutathione peroxidase GFC29_765 PF01966 HD domain GFC29_766 PF13769 Virulence factor GFC29_766 PF08712 Scaffold protein Nfu/NifU N terminal GFC29_769 PF06491 Disulphide isomerase GFC29_77 PF07690 Major Facilitator Superfamily GFC29_770 PF04445 Putative SAM-dependent methyltransferase GFC29_772 PF00155 Aminotransferase class I and II GFC29_774 PF00303 Thymidylate synthase GFC29_775 PF00186 Dihydrofolate reductase GFC29_776 PF10710 Protein of unknown function (DUF2512) GFC29_777 PF00585 C-terminal regulatory domain of Threonine dehydratase GFC29_777 PF00291 Pyridoxal-phosphate dependent enzyme GFC29_779 PF02645 Uncharacterised protein, DegV family COG1307 GFC29_78 PF00248 Aldo/keto reductase family GFC29_780 PF02630 SCO1/SenC GFC29_781 PF13472 GDSL-like Lipase/Acylhydrolase family GFC29_783 PF01189 16S rRNA methyltransferase RsmB/F GFC29_783 PF17126 RsmF rRNA methyltransferase first C-terminal domain GFC29_783 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GFC29_784 PF02660 Glycerol-3-phosphate acyltransferase GFC29_785 PF09997 Predicted membrane protein (DUF2238) GFC29_787 PF01546 Peptidase family M20/M25/M40 GFC29_787 PF07687 Peptidase dimerisation domain GFC29_788 PF12822 ECF transporter, substrate-specific component GFC29_79 PF13472 GDSL-like Lipase/Acylhydrolase family GFC29_80 PF00072 Response regulator receiver domain GFC29_80 PF00196 Bacterial regulatory proteins, luxR family GFC29_804 PF07670 Nucleoside recognition GFC29_805 PF02492 CobW/HypB/UreG, nucleotide-binding domain GFC29_805 PF07683 Cobalamin synthesis protein cobW C-terminal domain GFC29_806 PF03773 Predicted permease GFC29_807 PF09323 Domain of unknown function (DUF1980) GFC29_81 PF07730 Histidine kinase GFC29_81 PF00672 HAMP domain GFC29_81 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_810 PF13380 CoA binding domain GFC29_811 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_811 PF00204 DNA gyrase B GFC29_811 PF00986 DNA gyrase B subunit, carboxyl terminus GFC29_811 PF01751 Toprim domain GFC29_812 PF03989 DNA gyrase C-terminal domain, beta-propeller GFC29_812 PF00521 DNA gyrase/topoisomerase IV, subunit A GFC29_814 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GFC29_815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GFC29_816 PF02378 Phosphotransferase system, EIIC GFC29_816 PF00367 phosphotransferase system, EIIB GFC29_817 PF00128 Alpha amylase, catalytic domain GFC29_817 PF16657 Maltogenic Amylase, C-terminal domain GFC29_818 PF00392 Bacterial regulatory proteins, gntR family GFC29_818 PF07702 UTRA domain GFC29_819 PF03553 Na+/H+ antiporter family GFC29_82 PF09922 Cell wall-active antibiotics response 4TMS YvqF GFC29_822 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GFC29_822 PF02770 Acyl-CoA dehydrogenase, middle domain GFC29_822 PF08028 Acyl-CoA dehydrogenase, C-terminal domain GFC29_823 PF17284 Spermidine synthase tetramerisation domain GFC29_825 PF02082 Transcriptional regulator GFC29_826 PF00175 Oxidoreductase NAD-binding domain GFC29_826 PF00042 Globin GFC29_826 PF00970 Oxidoreductase FAD-binding domain GFC29_827 PF01641 SelR domain GFC29_827 PF01625 Peptide methionine sulfoxide reductase GFC29_828 PF01842 ACT domain GFC29_828 PF00551 Formyl transferase GFC29_829 PF02334 Replication terminator protein GFC29_830 PF07728 AAA domain (dynein-related subfamily) GFC29_831 PF00092 von Willebrand factor type A domain GFC29_838 PF00583 Acetyltransferase (GNAT) family GFC29_840 PF03575 Peptidase family S51 GFC29_841 PF00128 Alpha amylase, catalytic domain GFC29_841 PF01833 IPT/TIG domain GFC29_841 PF00686 Starch binding domain GFC29_841 PF02806 Alpha amylase, C-terminal all-beta domain GFC29_848 PF01451 Low molecular weight phosphotyrosine protein phosphatase GFC29_849 PF01758 Sodium Bile acid symporter family GFC29_85 PF01966 HD domain GFC29_85 PF00072 Response regulator receiver domain GFC29_850 PF01022 Bacterial regulatory protein, arsR family GFC29_854 PF18665 Tetracyclin repressor-like, C-terminal domain GFC29_854 PF00440 Bacterial regulatory proteins, tetR family GFC29_855 PF03176 MMPL family GFC29_856 PF08360 QacR-like protein, C-terminal region GFC29_856 PF00440 Bacterial regulatory proteins, tetR family GFC29_857 PF07690 Major Facilitator Superfamily GFC29_858 PF00141 Peroxidase GFC29_86 PF12729 Four helix bundle sensory module for signal transduction GFC29_86 PF00672 HAMP domain GFC29_86 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_861 PF01568 Molydopterin dinucleotide binding domain GFC29_861 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GFC29_861 PF00384 Molybdopterin oxidoreductase GFC29_863 PF12728 Helix-turn-helix domain GFC29_863 PF12727 PBP superfamily domain GFC29_864 PF00528 Binding-protein-dependent transport system inner membrane component GFC29_865 PF00005 ABC transporter GFC29_865 PF03459 TOBE domain GFC29_867 PF01037 Lrp/AsnC ligand binding domain GFC29_869 PF07739 TipAS antibiotic-recognition domain GFC29_869 PF13411 MerR HTH family regulatory protein GFC29_87 PF05593 RHS Repeat GFC29_870 PF01810 LysE type translocator GFC29_871 PF08892 YqcI/YcgG family GFC29_873 PF00664 ABC transporter transmembrane region GFC29_874 PF00664 ABC transporter transmembrane region GFC29_874 PF00005 ABC transporter GFC29_875 PF00664 ABC transporter transmembrane region GFC29_875 PF00005 ABC transporter GFC29_878 PF01566 Natural resistance-associated macrophage protein GFC29_879 PF01810 LysE type translocator GFC29_880 PF00392 Bacterial regulatory proteins, gntR family GFC29_880 PF00155 Aminotransferase class I and II GFC29_881 PF02667 Short chain fatty acid transporter GFC29_883 PF02779 Transketolase, pyrimidine binding domain GFC29_883 PF02780 Transketolase, C-terminal domain GFC29_884 PF00456 Transketolase, thiamine diphosphate binding domain GFC29_885 PF03611 PTS system sugar-specific permease component GFC29_887 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GFC29_889 PF00293 NUDIX domain GFC29_893 PF07995 Glucose / Sorbosone dehydrogenase GFC29_897 PF07681 DoxX GFC29_898 PF00881 Nitroreductase family GFC29_899 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) GFC29_900 PF01751 Toprim domain GFC29_900 PF01131 DNA topoisomerase GFC29_901 PF00106 short chain dehydrogenase GFC29_904 PF08240 Alcohol dehydrogenase GroES-like domain GFC29_904 PF00107 Zinc-binding dehydrogenase GFC29_907 PF00005 ABC transporter GFC29_908 PF00269 Small, acid-soluble spore proteins, alpha/beta type GFC29_911 PF12729 Four helix bundle sensory module for signal transduction GFC29_911 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GFC29_911 PF00672 HAMP domain GFC29_912 PF00563 EAL domain GFC29_912 PF08668 HDOD domain GFC29_913 PF13580 SIS domain GFC29_914 PF02378 Phosphotransferase system, EIIC GFC29_914 PF00367 phosphotransferase system, EIIB GFC29_916 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GFC29_917 PF01979 Amidohydrolase family GFC29_920 PF13276 HTH-like domain GFC29_920 PF13333 Integrase core domain GFC29_920 PF00665 Integrase core domain GFC29_921 PF00665 Integrase core domain GFC29_921 PF02796 Helix-turn-helix domain of resolvase GFC29_926 PF17418 Sporulation delaying protein SdpA GFC29_929 PF00005 ABC transporter GFC29_929 PF00664 ABC transporter transmembrane region GFC29_930 PF00005 ABC transporter GFC29_930 PF00664 ABC transporter transmembrane region GFC29_934 PF00892 EamA-like transporter family GFC29_935 PF03466 LysR substrate binding domain GFC29_935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_936 PF01520 N-acetylmuramoyl-L-alanine amidase GFC29_936 PF05036 Sporulation related domain GFC29_937 PF12464 Maltose acetyltransferase GFC29_937 PF14602 Hexapeptide repeat of succinyl-transferase GFC29_938 PF02146 Sir2 family GFC29_940 PF13520 Amino acid permease GFC29_941 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GFC29_941 PF00364 Biotin-requiring enzyme GFC29_941 PF02817 e3 binding domain GFC29_942 PF16078 2-oxoglutarate dehydrogenase N-terminus GFC29_942 PF00676 Dehydrogenase E1 component GFC29_942 PF16870 2-oxoglutarate dehydrogenase C-terminal GFC29_942 PF02779 Transketolase, pyrimidine binding domain GFC29_944 PF00296 Luciferase-like monooxygenase GFC29_945 PF13411 MerR HTH family regulatory protein GFC29_946 PF07690 Major Facilitator Superfamily GFC29_948 PF00892 EamA-like transporter family GFC29_949 PF01965 DJ-1/PfpI family GFC29_950 PF00403 Heavy-metal-associated domain GFC29_951 PF00403 Heavy-metal-associated domain GFC29_952 PF02583 Metal-sensitive transcriptional repressor GFC29_953 PF00817 impB/mucB/samB family GFC29_953 PF11799 impB/mucB/samB family C-terminal domain GFC29_953 PF11798 IMS family HHH motif GFC29_954 PF01022 Bacterial regulatory protein, arsR family GFC29_955 PF08327 Activator of Hsp90 ATPase homolog 1-like protein GFC29_956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GFC29_956 PF03466 LysR substrate binding domain GFC29_957 PF00892 EamA-like transporter family GFC29_958 PF00293 NUDIX domain GFC29_959 PF12679 ABC-2 family transporter protein GFC29_960 PF00005 ABC transporter GFC29_961 PF13472 GDSL-like Lipase/Acylhydrolase family GFC29_962 PF00753 Metallo-beta-lactamase superfamily GFC29_963 PF01380 SIS domain GFC29_964 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GFC29_965 PF00356 Bacterial regulatory proteins, lacI family GFC29_966 PF07690 Major Facilitator Superfamily GFC29_967 PF00294 pfkB family carbohydrate kinase GFC29_968 PF00120 Glutamine synthetase, catalytic domain GFC29_968 PF03951 Glutamine synthetase, beta-Grasp domain GFC29_969 PF01925 Sulfite exporter TauE/SafE GFC29_973 PF03475 3-alpha domain GFC29_973 PF03473 MOSC domain GFC29_974 PF00005 ABC transporter GFC29_974 PF00664 ABC transporter transmembrane region GFC29_975 PF00664 ABC transporter transmembrane region GFC29_975 PF00005 ABC transporter GFC29_977 PF00403 Heavy-metal-associated domain GFC29_979 PF05163 DinB family GFC29_980 PF01022 Bacterial regulatory protein, arsR family GFC29_982 PF00005 ABC transporter GFC29_983 PF00392 Bacterial regulatory proteins, gntR family GFC29_984 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GFC29_984 PF00512 His Kinase A (phospho-acceptor) domain GFC29_989 PF00005 ABC transporter GFC29_991 PF00892 EamA-like transporter family GFC29_992 PF00892 EamA-like transporter family GFC29_993 PF03845 Spore germination protein GFC29_994 PF03323 Bacillus/Clostridium GerA spore germination protein GFC29_995 PF05504 Spore germination B3/ GerAC like, C-terminal GFC29_998 PF07690 Major Facilitator Superfamily