locus-tag class description BBF96_00040 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BBF96_00040 PF01871 AMMECR1 BBF96_00045 PF00892 EamA-like transporter family BBF96_00065 PF08240 Alcohol dehydrogenase GroES-like domain BBF96_00065 PF00107 Zinc-binding dehydrogenase BBF96_00070 PF00155 Aminotransferase class I and II BBF96_00075 PF08281 Sigma-70, region 4 BBF96_00075 PF04542 Sigma-70 region 2 BBF96_00095 PF00596 Class II Aldolase and Adducin N-terminal domain BBF96_00100 PF02457 DisA bacterial checkpoint controller nucleotide-binding BBF96_00115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBF96_00115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBF96_00115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBF96_00115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBF96_00125 PF01380 SIS domain BBF96_00200 PF00920 Dehydratase family BBF96_00210 PF03480 Bacterial extracellular solute-binding protein, family 7 BBF96_00215 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BBF96_00220 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BBF96_00225 PF03480 Bacterial extracellular solute-binding protein, family 7 BBF96_00235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BBF96_00240 PF09861 Lactate racemase N-terminal domain BBF96_00245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBF96_00245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBF96_00250 PF00294 pfkB family carbohydrate kinase BBF96_00255 PF01081 KDPG and KHG aldolase BBF96_00260 PF09339 IclR helix-turn-helix domain BBF96_00260 PF01614 Bacterial transcriptional regulator BBF96_00265 PF00258 Flavodoxin BBF96_00265 PF00753 Metallo-beta-lactamase superfamily BBF96_00265 PF00301 Rubredoxin BBF96_00270 PF09312 SurA N-terminal domain BBF96_00280 PF00132 Bacterial transferase hexapeptide (six repeats) BBF96_00285 PF01648 4'-phosphopantetheinyl transferase superfamily BBF96_00290 PF01256 Carbohydrate kinase BBF96_00290 PF03853 YjeF-related protein N-terminus BBF96_00295 PF00842 Alanine racemase, C-terminal domain BBF96_00295 PF01168 Alanine racemase, N-terminal domain BBF96_00300 PF12146 Serine aminopeptidase, S33 BBF96_00315 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BBF96_00325 PF07687 Peptidase dimerisation domain BBF96_00325 PF01546 Peptidase family M20/M25/M40 BBF96_00335 PF01979 Amidohydrolase family BBF96_00350 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BBF96_00355 PF00814 Glycoprotease family BBF96_00360 PF00583 Acetyltransferase (GNAT) family BBF96_00375 PF00166 Chaperonin 10 Kd subunit BBF96_00380 PF00118 TCP-1/cpn60 chaperonin family BBF96_00385 PF00291 Pyridoxal-phosphate dependent enzyme BBF96_00390 PF00005 ABC transporter BBF96_00405 PF00082 Subtilase family BBF96_00410 PF00117 Glutamine amidotransferase class-I BBF96_00410 PF00958 GMP synthase C terminal domain BBF96_00415 PF00860 Permease family BBF96_00420 PF01967 MoaC family BBF96_00425 PF07690 Major Facilitator Superfamily BBF96_00435 PF00994 Probable molybdopterin binding domain BBF96_00440 PF01168 Alanine racemase, N-terminal domain BBF96_00445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBF96_00445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBF96_00450 PF01371 Trp repressor protein BBF96_00455 PF00291 Pyridoxal-phosphate dependent enzyme BBF96_00460 PF00005 ABC transporter BBF96_00460 PF09383 NIL domain BBF96_00465 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_00470 PF03180 NLPA lipoprotein BBF96_00475 PF00483 Nucleotidyl transferase BBF96_00485 PF16363 GDP-mannose 4,6 dehydratase BBF96_00490 PF04321 RmlD substrate binding domain BBF96_00505 PF00535 Glycosyl transferase family 2 BBF96_00515 PF00535 Glycosyl transferase family 2 BBF96_00520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BBF96_00520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BBF96_00520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BBF96_00525 PF12996 DUF based on E. rectale Gene description (DUF3880) BBF96_00530 PF00343 Carbohydrate phosphorylase BBF96_00530 PF11897 Protein of unknown function (DUF3417) BBF96_00535 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BBF96_00535 PF00534 Glycosyl transferases group 1 BBF96_00540 PF01810 LysE type translocator BBF96_00670 PF13472 GDSL-like Lipase/Acylhydrolase family BBF96_00690 PF01661 Macro domain BBF96_00695 PF12627 Probable RNA and SrmB- binding site of polymerase A BBF96_00695 PF12626 Polymerase A arginine-rich C-terminus BBF96_00695 PF01743 Poly A polymerase head domain BBF96_00700 PF00497 Bacterial extracellular solute-binding proteins, family 3 BBF96_00710 PF00005 ABC transporter BBF96_00715 PF00005 ABC transporter BBF96_00720 PF00005 ABC transporter BBF96_00735 PF00005 ABC transporter BBF96_00745 PF02608 ABC transporter substrate-binding protein PnrA-like BBF96_00790 PF03061 Thioesterase superfamily BBF96_00830 PF13361 UvrD-like helicase C-terminal domain BBF96_00830 PF00580 UvrD/REP helicase N-terminal domain BBF96_00835 PF12826 Helix-hairpin-helix motif BBF96_00835 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BBF96_00835 PF03120 NAD-dependent DNA ligase OB-fold domain BBF96_00835 PF01653 NAD-dependent DNA ligase adenylation domain BBF96_00835 PF00533 BRCA1 C Terminus (BRCT) domain BBF96_00845 PF01551 Peptidase family M23 BBF96_00845 PF01476 LysM domain BBF96_00845 PF08525 Opacity-associated protein A N-terminal motif BBF96_00850 PF02562 PhoH-like protein BBF96_00850 PF13638 PIN domain BBF96_00855 PF02686 Glu-tRNAGln amidotransferase C subunit BBF96_00860 PF01425 Amidase BBF96_00865 PF00583 Acetyltransferase (GNAT) family BBF96_00870 PF02934 GatB/GatE catalytic domain BBF96_00870 PF02637 GatB domain BBF96_00890 PF01695 IstB-like ATP binding protein BBF96_00910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BBF96_00910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BBF96_00915 PF13193 AMP-binding enzyme C-terminal domain BBF96_00915 PF00501 AMP-binding enzyme BBF96_00920 PF00550 Phosphopantetheine attachment site BBF96_00925 PF18152 DAHP synthase ferredoxin-like domain BBF96_00925 PF00793 DAHP synthetase I family BBF96_00940 PF01554 MatE BBF96_00950 PF01938 TRAM domain BBF96_00950 PF05958 tRNA (Uracil-5-)-methyltransferase BBF96_00955 PF00440 Bacterial regulatory proteins, tetR family BBF96_00960 PF00391 PEP-utilising enzyme, mobile domain BBF96_00960 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BBF96_00965 PF07690 Major Facilitator Superfamily BBF96_00975 PF00892 EamA-like transporter family BBF96_00980 PF02682 Carboxyltransferase domain, subdomain C and D BBF96_00985 PF03746 LamB/YcsF family BBF96_00990 PF02626 Carboxyltransferase domain, subdomain A and B BBF96_01010 PF00072 Response regulator receiver domain BBF96_01010 PF01966 HD domain BBF96_01015 PF02954 Bacterial regulatory protein, Fis family BBF96_01015 PF00158 Sigma-54 interaction domain BBF96_01015 PF13426 PAS domain BBF96_01020 PF01432 Peptidase family M3 BBF96_01020 PF08439 Oligopeptidase F BBF96_01025 PF00149 Calcineurin-like phosphoesterase BBF96_01025 PF02872 5'-nucleotidase, C-terminal domain BBF96_01030 PF04542 Sigma-70 region 2 BBF96_01030 PF08281 Sigma-70, region 4 BBF96_01045 PF00005 ABC transporter BBF96_01060 PF00005 ABC transporter BBF96_01060 PF13732 Domain of unknown function (DUF4162) BBF96_01070 PF05724 Thiopurine S-methyltransferase (TPMT) BBF96_01080 PF01411 tRNA synthetases class II (A) BBF96_01080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBF96_01080 PF02272 DHHA1 domain BBF96_01085 PF08241 Methyltransferase domain BBF96_01090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBF96_01090 PF03459 TOBE domain BBF96_01100 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01110 PF00152 tRNA synthetases class II (D, K and N) BBF96_01110 PF01336 OB-fold nucleic acid binding domain BBF96_01115 PF00892 EamA-like transporter family BBF96_01120 PF00730 HhH-GPD superfamily base excision DNA repair protein BBF96_01135 PF01546 Peptidase family M20/M25/M40 BBF96_01140 PF02390 Putative methyltransferase BBF96_01150 PF00436 Single-strand binding protein family BBF96_01170 PF00849 RNA pseudouridylate synthase BBF96_01175 PF00291 Pyridoxal-phosphate dependent enzyme BBF96_01180 PF01565 FAD binding domain BBF96_01180 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BBF96_01185 PF01048 Phosphorylase superfamily BBF96_01190 PF00082 Subtilase family BBF96_01200 PF00082 Subtilase family BBF96_01205 PF02310 B12 binding domain BBF96_01205 PF04055 Radical SAM superfamily BBF96_01210 PF00962 Adenosine/AMP deaminase BBF96_01220 PF16916 Dimerisation domain of Zinc Transporter BBF96_01220 PF01545 Cation efflux family BBF96_01225 PF03951 Glutamine synthetase, beta-Grasp domain BBF96_01225 PF00120 Glutamine synthetase, catalytic domain BBF96_01230 PF03956 Lysine exporter LysO BBF96_01240 PF00664 ABC transporter transmembrane region BBF96_01240 PF00005 ABC transporter BBF96_01245 PF00664 ABC transporter transmembrane region BBF96_01245 PF00005 ABC transporter BBF96_01270 PF13416 Bacterial extracellular solute-binding protein BBF96_01275 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01280 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01285 PF00005 ABC transporter BBF96_01285 PF08402 TOBE domain BBF96_01295 PF13556 PucR C-terminal helix-turn-helix domain BBF96_01295 PF06018 CodY GAF-like domain BBF96_01295 PF17853 GGDEF-like domain BBF96_01310 PF04143 Sulphur transport BBF96_01315 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BBF96_01315 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BBF96_01315 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_01320 PF00581 Rhodanese-like domain BBF96_01325 PF09335 SNARE associated Golgi protein BBF96_01380 PF00266 Aminotransferase class-V BBF96_01420 PF01966 HD domain BBF96_01430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BBF96_01440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_01445 PF00005 ABC transporter BBF96_01450 PF02687 FtsX-like permease family BBF96_01450 PF00005 ABC transporter BBF96_01450 PF12704 MacB-like periplasmic core domain BBF96_01455 PF02687 FtsX-like permease family BBF96_01455 PF12704 MacB-like periplasmic core domain BBF96_01470 PF00480 ROK family BBF96_01470 PF01047 MarR family BBF96_01480 PF00480 ROK family BBF96_01485 PF01261 Xylose isomerase-like TIM barrel BBF96_01490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BBF96_01490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BBF96_01495 PF13407 Periplasmic binding protein domain BBF96_01500 PF00005 ABC transporter BBF96_01505 PF02653 Branched-chain amino acid transport system / permease component BBF96_01520 PF01043 SecA preprotein cross-linking domain BBF96_01520 PF07516 SecA Wing and Scaffold domain BBF96_01520 PF07517 SecA DEAD-like domain BBF96_01520 PF02810 SEC-C motif BBF96_01540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_01540 PF00672 HAMP domain BBF96_01540 PF02743 Cache domain BBF96_01545 PF01406 tRNA synthetases class I (C) catalytic domain BBF96_01550 PF03462 PCRF domain BBF96_01550 PF00472 RF-1 domain BBF96_01570 PF03808 Glycosyl transferase WecB/TagA/CpsF family BBF96_01575 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BBF96_01575 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BBF96_01580 PF00456 Transketolase, thiamine diphosphate binding domain BBF96_01585 PF02780 Transketolase, C-terminal domain BBF96_01585 PF02779 Transketolase, pyrimidine binding domain BBF96_01585 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BBF96_01600 PF13180 PDZ domain BBF96_01600 PF03572 Peptidase family S41 BBF96_01615 PF01520 N-acetylmuramoyl-L-alanine amidase BBF96_01615 PF04122 Putative cell wall binding repeat 2 BBF96_01635 PF12850 Calcineurin-like phosphoesterase superfamily domain BBF96_01645 PF02151 UvrB/uvrC motif BBF96_01645 PF12344 Ultra-violet resistance protein B BBF96_01645 PF00271 Helicase conserved C-terminal domain BBF96_01645 PF17757 UvrB interaction domain BBF96_01645 PF04851 Type III restriction enzyme, res subunit BBF96_01650 PF17760 UvrA interaction domain BBF96_01650 PF17755 UvrA DNA-binding domain BBF96_01655 PF00356 Bacterial regulatory proteins, lacI family BBF96_01660 PF17137 Domain of unknown function (DUF5110) BBF96_01660 PF01055 Glycosyl hydrolases family 31 BBF96_01660 PF16338 Domain of unknown function (DUF4968) BBF96_01660 PF13802 Galactose mutarotase-like BBF96_01665 PF13416 Bacterial extracellular solute-binding protein BBF96_01670 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01675 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01680 PF02903 Alpha amylase, N-terminal ig-like domain BBF96_01680 PF00128 Alpha amylase, catalytic domain BBF96_01685 PF02151 UvrB/uvrC motif BBF96_01685 PF08459 UvrC Helix-hairpin-helix N-terminal BBF96_01685 PF01541 GIY-YIG catalytic domain BBF96_01690 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01695 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_01710 PF02811 PHP domain BBF96_01735 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BBF96_01740 PF12838 4Fe-4S dicluster domain BBF96_01745 PF02583 Metal-sensitive transcriptional repressor BBF96_01750 PF00403 Heavy-metal-associated domain BBF96_01760 PF00403 Heavy-metal-associated domain BBF96_01770 PF00999 Sodium/hydrogen exchanger family BBF96_01785 PF02585 GlcNAc-PI de-N-acetylase BBF96_01790 PF00534 Glycosyl transferases group 1 BBF96_01790 PF13439 Glycosyltransferase Family 4 BBF96_01795 PF02645 Uncharacterised protein, DegV family COG1307 BBF96_01805 PF00480 ROK family BBF96_01810 PF07475 HPr Serine kinase C-terminal domain BBF96_01810 PF02603 HPr Serine kinase N terminus BBF96_01855 PF09210 Domain of unknown function (DUF1957) BBF96_01855 PF03065 Glycosyl hydrolase family 57 BBF96_01860 PF13439 Glycosyltransferase Family 4 BBF96_01860 PF00534 Glycosyl transferases group 1 BBF96_01865 PF00483 Nucleotidyl transferase BBF96_01875 PF00381 PTS HPr component phosphorylation site BBF96_01885 PF02811 PHP domain BBF96_01890 PF01979 Amidohydrolase family BBF96_01930 PF00072 Response regulator receiver domain BBF96_01935 PF01040 UbiA prenyltransferase family BBF96_01945 PF00005 ABC transporter BBF96_01955 PF01926 50S ribosome-binding GTPase BBF96_01955 PF01018 GTP1/OBG BBF96_01965 PF00269 Small, acid-soluble spore proteins, alpha/beta type BBF96_01970 PF02811 PHP domain BBF96_01975 PF03668 P-loop ATPase protein family BBF96_01980 PF01933 Uncharacterised protein family UPF0052 BBF96_01985 PF10298 WhiA N-terminal LAGLIDADG-like domain BBF96_01985 PF14527 WhiA LAGLIDADG-like domain BBF96_01985 PF02650 WhiA C-terminal HTH domain BBF96_01990 PF04963 Sigma-54 factor, core binding domain BBF96_01990 PF04552 Sigma-54, DNA binding domain BBF96_01990 PF00309 Sigma-54 factor, Activator interacting domain (AID) BBF96_02010 PF04198 Putative sugar-binding domain BBF96_02015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BBF96_02015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BBF96_02020 PF00162 Phosphoglycerate kinase BBF96_02025 PF00121 Triosephosphate isomerase BBF96_02030 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BBF96_02030 PF01676 Metalloenzyme superfamily BBF96_02035 PF03952 Enolase, N-terminal domain BBF96_02035 PF00113 Enolase, C-terminal TIM barrel domain BBF96_02040 PF03840 Preprotein translocase SecG subunit BBF96_02045 PF03030 Inorganic H+ pyrophosphatase BBF96_02060 PF00881 Nitroreductase family BBF96_02070 PF00575 S1 RNA binding domain BBF96_02070 PF00773 RNB domain BBF96_02070 PF17876 Cold shock domain BBF96_02070 PF08206 Ribonuclease B OB domain BBF96_02075 PF01668 SmpB protein BBF96_02090 PF00672 HAMP domain BBF96_02090 PF02743 Cache domain BBF96_02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_02100 PF01979 Amidohydrolase family BBF96_02105 PF02073 Thermophilic metalloprotease (M29) BBF96_02110 PF01740 STAS domain BBF96_02115 PF13581 Histidine kinase-like ATPase domain BBF96_02120 PF04545 Sigma-70, region 4 BBF96_02120 PF04542 Sigma-70 region 2 BBF96_02120 PF04539 Sigma-70 region 3 BBF96_02125 PF04198 Putative sugar-binding domain BBF96_02130 PF06130 Phosphate propanoyltransferase BBF96_02135 PF00936 BMC domain BBF96_02145 PF03319 Ethanolamine utilisation protein EutN/carboxysome BBF96_02150 PF00171 Aldehyde dehydrogenase family BBF96_02155 PF10531 SLBB domain BBF96_02155 PF13375 RnfC Barrel sandwich hybrid domain BBF96_02155 PF13237 4Fe-4S dicluster domain BBF96_02155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_02165 PF00936 BMC domain BBF96_02170 PF02502 Ribose/Galactose Isomerase BBF96_02180 PF03319 Ethanolamine utilisation protein EutN/carboxysome BBF96_02185 PF01791 DeoC/LacD family aldolase BBF96_02225 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BBF96_02230 PF07451 Stage V sporulation protein AD (SpoVAD) BBF96_02235 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BBF96_02240 PF14097 Stage V sporulation protein AE1 BBF96_02245 PF03323 Bacillus/Clostridium GerA spore germination protein BBF96_02260 PF01869 BadF/BadG/BcrA/BcrD ATPase family BBF96_02265 PF07969 Amidohydrolase family BBF96_02270 PF07722 Peptidase C26 BBF96_02275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_02285 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_02285 PF12911 N-terminal TM domain of oligopeptide transport permease C BBF96_02290 PF12627 Probable RNA and SrmB- binding site of polymerase A BBF96_02290 PF01966 HD domain BBF96_02290 PF01743 Poly A polymerase head domain BBF96_02295 PF13180 PDZ domain BBF96_02295 PF02163 Peptidase family M50 BBF96_02305 PF00579 tRNA synthetases class I (W and Y) BBF96_02310 PF02616 Segregation and condensation protein ScpA BBF96_02315 PF04079 Segregation and condensation complex subunit ScpB BBF96_02325 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BBF96_02330 PF00768 D-alanyl-D-alanine carboxypeptidase BBF96_02330 PF07943 Penicillin-binding protein 5, C-terminal domain BBF96_02345 PF00005 ABC transporter BBF96_02350 PF00849 RNA pseudouridylate synthase BBF96_02350 PF01479 S4 domain BBF96_02355 PF04232 Stage V sporulation protein S (SpoVS) BBF96_02360 PF02463 RecF/RecN/SMC N terminal domain BBF96_02360 PF06470 SMC proteins Flexible Hinge Domain BBF96_02370 PF02881 SRP54-type protein, helical bundle domain BBF96_02370 PF00448 SRP54-type protein, GTPase domain BBF96_02395 PF07690 Major Facilitator Superfamily BBF96_02420 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BBF96_02425 PF00448 SRP54-type protein, GTPase domain BBF96_02425 PF02881 SRP54-type protein, helical bundle domain BBF96_02425 PF02978 Signal peptide binding domain BBF96_02430 PF00886 Ribosomal protein S16 BBF96_02440 PF01782 RimM N-terminal domain BBF96_02440 PF05239 PRC-barrel domain BBF96_02445 PF01746 tRNA (Guanine-1)-methyltransferase BBF96_02450 PF01245 Ribosomal protein L19 BBF96_02455 PF10502 Signal peptidase, peptidase S26 BBF96_02460 PF01926 50S ribosome-binding GTPase BBF96_02465 PF01351 Ribonuclease HII BBF96_02480 PF13335 Magnesium chelatase, subunit ChlI C-terminal BBF96_02480 PF01078 Magnesium chelatase, subunit ChlI BBF96_02485 PF02021 Uncharacterised protein family UPF0102 BBF96_02495 PF17782 DprA winged helix domain BBF96_02495 PF02481 DNA recombination-mediator protein A BBF96_02505 PF01751 Toprim domain BBF96_02505 PF01396 Topoisomerase DNA binding C4 zinc finger BBF96_02505 PF01131 DNA topoisomerase BBF96_02510 PF01134 Glucose inhibited division protein A BBF96_02515 PF00227 Proteasome subunit BBF96_02520 PF10431 C-terminal, D2-small domain, of ClpB protein BBF96_02520 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_02520 PF07724 AAA domain (Cdc48 subfamily) BBF96_02525 PF06018 CodY GAF-like domain BBF96_02525 PF08222 CodY helix-turn-helix domain BBF96_02530 PF00072 Response regulator receiver domain BBF96_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_02535 PF01627 Hpt domain BBF96_02535 PF07194 P2 response regulator binding domain BBF96_02535 PF02895 Signal transducing histidine kinase, homodimeric domain BBF96_02535 PF01584 CheW-like domain BBF96_02540 PF01584 CheW-like domain BBF96_02545 PF04509 CheC-like family BBF96_02550 PF03975 CheD chemotactic sensory transduction BBF96_02555 PF00318 Ribosomal protein S2 BBF96_02560 PF00889 Elongation factor TS BBF96_02565 PF00696 Amino acid kinase family BBF96_02570 PF01765 Ribosome recycling factor BBF96_02580 PF01255 Putative undecaprenyl diphosphate synthase BBF96_02595 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BBF96_02595 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BBF96_02595 PF13288 DXP reductoisomerase C-terminal domain BBF96_02600 PF13180 PDZ domain BBF96_02600 PF02163 Peptidase family M50 BBF96_02610 PF04551 GcpE protein BBF96_02615 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBF96_02615 PF03129 Anticodon binding domain BBF96_02615 PF04073 Aminoacyl-tRNA editing domain BBF96_02620 PF00535 Glycosyl transferase family 2 BBF96_02625 PF02308 MgtC family BBF96_02630 PF07690 Major Facilitator Superfamily BBF96_02635 PF00929 Exonuclease BBF96_02635 PF02811 PHP domain BBF96_02635 PF01336 OB-fold nucleic acid binding domain BBF96_02635 PF11490 DNA polymerase III polC-type N-terminus II BBF96_02635 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBF96_02635 PF14579 Helix-hairpin-helix motif BBF96_02635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBF96_02655 PF00664 ABC transporter transmembrane region BBF96_02655 PF00005 ABC transporter BBF96_02660 PF00005 ABC transporter BBF96_02660 PF00664 ABC transporter transmembrane region BBF96_02665 PF02576 RimP N-terminal domain BBF96_02665 PF17384 RimP C-terminal SH3 domain BBF96_02670 PF00575 S1 RNA binding domain BBF96_02670 PF13184 NusA-like KH domain BBF96_02670 PF08529 NusA N-terminal domain BBF96_02675 PF04296 Protein of unknown function (DUF448) BBF96_02685 PF04760 Translation initiation factor IF-2, N-terminal region BBF96_02685 PF11987 Translation-initiation factor 2 BBF96_02685 PF00009 Elongation factor Tu GTP binding domain BBF96_02690 PF02033 Ribosome-binding factor A BBF96_02695 PF01368 DHH family BBF96_02695 PF02272 DHHA1 domain BBF96_02700 PF01509 TruB family pseudouridylate synthase (N terminal domain) BBF96_02700 PF16198 tRNA pseudouridylate synthase B C-terminal domain BBF96_02705 PF01687 Riboflavin kinase BBF96_02705 PF06574 FAD synthetase BBF96_02720 PF00312 Ribosomal protein S15 BBF96_02725 PF03725 3' exoribonuclease family, domain 2 BBF96_02725 PF00575 S1 RNA binding domain BBF96_02725 PF00013 KH domain BBF96_02725 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BBF96_02725 PF01138 3' exoribonuclease family, domain 1 BBF96_02730 PF01261 Xylose isomerase-like TIM barrel BBF96_02735 PF13307 Helicase C-terminal domain BBF96_02735 PF06733 DEAD_2 BBF96_02740 PF07486 Cell Wall Hydrolase BBF96_02740 PF01471 Putative peptidoglycan binding domain BBF96_02745 PF00990 Diguanylate cyclase, GGDEF domain BBF96_02750 PF08239 Bacterial SH3 domain BBF96_02750 PF01520 N-acetylmuramoyl-L-alanine amidase BBF96_02755 PF01522 Polysaccharide deacetylase BBF96_02760 PF01522 Polysaccharide deacetylase BBF96_02765 PF04294 VanW like protein BBF96_02770 PF00692 dUTPase BBF96_02775 PF08497 Radical SAM N-terminal BBF96_02775 PF04055 Radical SAM superfamily BBF96_02775 PF11842 Domain of unknown function (DUF3362) BBF96_02800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BBF96_02800 PF16924 Dipicolinate synthase subunit A N-terminal domain BBF96_02805 PF02441 Flavoprotein BBF96_02810 PF01118 Semialdehyde dehydrogenase, NAD binding domain BBF96_02810 PF02774 Semialdehyde dehydrogenase, dimerisation domain BBF96_02815 PF00696 Amino acid kinase family BBF96_02815 PF13840 ACT domain BBF96_02820 PF00701 Dihydrodipicolinate synthetase family BBF96_02825 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BBF96_02825 PF00753 Metallo-beta-lactamase superfamily BBF96_02825 PF17770 Ribonuclease J C-terminal domain BBF96_02830 PF18211 Csm1 subunit domain B BBF96_02840 PF03787 RAMP superfamily BBF96_02850 PF03787 RAMP superfamily BBF96_02865 PF01910 Thiamine-binding protein BBF96_02870 PF00574 Clp protease BBF96_02880 PF02690 Na+/Pi-cotransporter BBF96_02885 PF02673 Bacitracin resistance protein BacA BBF96_02890 PF02690 Na+/Pi-cotransporter BBF96_02895 PF09397 Ftsk gamma domain BBF96_02895 PF17854 FtsK alpha domain BBF96_02895 PF01580 FtsK/SpoIIIE family BBF96_02900 PF07702 UTRA domain BBF96_02900 PF00392 Bacterial regulatory proteins, gntR family BBF96_02925 PF11868 Protein of unknown function (DUF3388) BBF96_02930 PF13464 Domain of unknown function (DUF4115) BBF96_02950 PF01048 Phosphorylase superfamily BBF96_02960 PF12631 MnmE helical domain BBF96_02960 PF01926 50S ribosome-binding GTPase BBF96_02960 PF10396 GTP-binding protein TrmE N-terminus BBF96_03025 PF01975 Survival protein SurE BBF96_03040 PF00271 Helicase conserved C-terminal domain BBF96_03040 PF00176 SNF2 family N-terminal domain BBF96_03055 PF07690 Major Facilitator Superfamily BBF96_03060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBF96_03060 PF03129 Anticodon binding domain BBF96_03095 PF01613 Flavin reductase like domain BBF96_03105 PF13732 Domain of unknown function (DUF4162) BBF96_03105 PF00005 ABC transporter BBF96_03130 PF07690 Major Facilitator Superfamily BBF96_03160 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BBF96_03165 PF02436 Conserved carboxylase domain BBF96_03165 PF00682 HMGL-like BBF96_03165 PF00364 Biotin-requiring enzyme BBF96_03170 PF01551 Peptidase family M23 BBF96_03170 PF01476 LysM domain BBF96_03180 PF04324 BFD-like [2Fe-2S] binding domain BBF96_03180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_03195 PF01266 FAD dependent oxidoreductase BBF96_03200 PF00171 Aldehyde dehydrogenase family BBF96_03205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_03205 PF00672 HAMP domain BBF96_03205 PF02743 Cache domain BBF96_03215 PF03576 Peptidase family S58 BBF96_03235 PF14659 Phage integrase, N-terminal SAM-like domain BBF96_03235 PF00589 Phage integrase family BBF96_03305 PF09856 Predicted transcriptional regulator (DUF2083) BBF96_03305 PF06114 IrrE N-terminal-like domain BBF96_03305 PF01381 Helix-turn-helix BBF96_03365 PF00270 DEAD/DEAH box helicase BBF96_03365 PF00271 Helicase conserved C-terminal domain BBF96_03395 PF00436 Single-strand binding protein family BBF96_03570 PF08239 Bacterial SH3 domain BBF96_03570 PF01520 N-acetylmuramoyl-L-alanine amidase BBF96_03625 PF01066 CDP-alcohol phosphatidyltransferase BBF96_03630 PF04608 Phosphatidylglycerophosphatase A BBF96_03660 PF13426 PAS domain BBF96_03660 PF02954 Bacterial regulatory protein, Fis family BBF96_03660 PF00158 Sigma-54 interaction domain BBF96_03670 PF01053 Cys/Met metabolism PLP-dependent enzyme BBF96_03675 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BBF96_03675 PF01276 Orn/Lys/Arg decarboxylase, major domain BBF96_03680 PF02464 Competence-damaged protein BBF96_03680 PF18146 Damage-inducible protein CinA KH domain BBF96_03680 PF00994 Probable molybdopterin binding domain BBF96_03685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BBF96_03685 PF00437 Type II/IV secretion system protein BBF96_03690 PF00482 Type II secretion system (T2SS), protein F BBF96_03695 PF08334 Type II secretion system (T2SS), protein G BBF96_03695 PF07963 Prokaryotic N-terminal methylation motif BBF96_03735 PF11741 AMIN domain BBF96_03735 PF07660 Secretin and TonB N terminus short domain BBF96_03735 PF03958 Bacterial type II/III secretion system short domain BBF96_03735 PF00263 Bacterial type II and III secretion system protein BBF96_03750 PF00154 recA bacterial DNA recombination protein BBF96_03755 PF02631 RecX family BBF96_03760 PF01966 HD domain BBF96_03760 PF00013 KH domain BBF96_03760 PF12072 Domain of unknown function (DUF3552) BBF96_03770 PF13277 YmdB-like protein BBF96_03775 PF04232 Stage V sporulation protein S (SpoVS) BBF96_03780 PF01979 Amidohydrolase family BBF96_03785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BBF96_03785 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BBF96_03790 PF03450 CO dehydrogenase flavoprotein C-terminal domain BBF96_03790 PF00941 FAD binding domain in molybdopterin dehydrogenase BBF96_03795 PF00111 2Fe-2S iron-sulfur cluster binding domain BBF96_03795 PF01799 [2Fe-2S] binding domain BBF96_03805 PF01244 Membrane dipeptidase (Peptidase family M19) BBF96_03820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_03825 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_03830 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_03830 PF12911 N-terminal TM domain of oligopeptide transport permease C BBF96_03835 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_03835 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBF96_03840 PF00672 HAMP domain BBF96_03840 PF12729 Four helix bundle sensory module for signal transduction BBF96_03840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_03875 PF05067 Manganese containing catalase BBF96_03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_03890 PF02424 ApbE family BBF96_03905 PF00348 Polyprenyl synthetase BBF96_03920 PF03167 Uracil DNA glycosylase superfamily BBF96_03930 PF02926 THUMP domain BBF96_03930 PF01170 Putative RNA methylase family UPF0020 BBF96_03935 PF05362 Lon protease (S16) C-terminal proteolytic domain BBF96_03935 PF13654 AAA domain BBF96_03945 PF01402 Ribbon-helix-helix protein, copG family BBF96_03945 PF08753 NikR C terminal nickel binding domain BBF96_03950 PF01891 Cobalt uptake substrate-specific transmembrane region BBF96_03950 PF13190 PDGLE domain BBF96_03965 PF00005 ABC transporter BBF96_03970 PF07670 Nucleoside recognition BBF96_03975 PF07670 Nucleoside recognition BBF96_03980 PF02811 PHP domain BBF96_03995 PF01618 MotA/TolQ/ExbB proton channel family BBF96_04000 PF02472 Biopolymer transport protein ExbD/TolR BBF96_04020 PF00334 Nucleoside diphosphate kinase BBF96_04025 PF07486 Cell Wall Hydrolase BBF96_04025 PF01471 Putative peptidoglycan binding domain BBF96_04030 PF00313 'Cold-shock' DNA-binding domain BBF96_04040 PF00521 DNA gyrase/topoisomerase IV, subunit A BBF96_04040 PF03989 DNA gyrase C-terminal domain, beta-propeller BBF96_04045 PF00204 DNA gyrase B BBF96_04045 PF00986 DNA gyrase B subunit, carboxyl terminus BBF96_04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_04045 PF01751 Toprim domain BBF96_04050 PF04122 Putative cell wall binding repeat 2 BBF96_04050 PF08486 Stage II sporulation protein BBF96_04055 PF00403 Heavy-metal-associated domain BBF96_04060 PF01022 Bacterial regulatory protein, arsR family BBF96_04065 PF00919 Uncharacterized protein family UPF0004 BBF96_04065 PF01938 TRAM domain BBF96_04065 PF04055 Radical SAM superfamily BBF96_04080 PF01497 Periplasmic binding protein BBF96_04085 PF01966 HD domain BBF96_04090 PF12392 Collagenase BBF96_04090 PF01136 Peptidase family U32 BBF96_04095 PF01594 AI-2E family transporter BBF96_04120 PF01066 CDP-alcohol phosphatidyltransferase BBF96_04125 PF02666 Phosphatidylserine decarboxylase BBF96_04150 PF05190 MutS family domain IV BBF96_04150 PF05192 MutS domain III BBF96_04150 PF05188 MutS domain II BBF96_04150 PF00488 MutS domain V BBF96_04150 PF01624 MutS domain I BBF96_04155 PF01119 DNA mismatch repair protein, C-terminal domain BBF96_04155 PF08676 MutL C terminal dimerisation domain BBF96_04170 PF04055 Radical SAM superfamily BBF96_04170 PF00919 Uncharacterized protein family UPF0004 BBF96_04170 PF01938 TRAM domain BBF96_04175 PF01554 MatE BBF96_04180 PF00326 Prolyl oligopeptidase family BBF96_04180 PF07676 WD40-like Beta Propeller Repeat BBF96_04185 PF00512 His Kinase A (phospho-acceptor) domain BBF96_04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_04185 PF00989 PAS fold BBF96_04190 PF13538 UvrD-like helicase C-terminal domain BBF96_04205 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BBF96_04205 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BBF96_04235 PF00941 FAD binding domain in molybdopterin dehydrogenase BBF96_04235 PF03450 CO dehydrogenase flavoprotein C-terminal domain BBF96_04240 PF01799 [2Fe-2S] binding domain BBF96_04240 PF00111 2Fe-2S iron-sulfur cluster binding domain BBF96_04245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BBF96_04250 PF00860 Permease family BBF96_04260 PF01039 Carboxyl transferase domain BBF96_04270 PF00364 Biotin-requiring enzyme BBF96_04275 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BBF96_04280 PF07905 Purine catabolism regulatory protein-like family BBF96_04280 PF17853 GGDEF-like domain BBF96_04280 PF13556 PucR C-terminal helix-turn-helix domain BBF96_04290 PF02629 CoA binding domain BBF96_04290 PF00549 CoA-ligase BBF96_04300 PF06545 Protein of unknown function (DUF1116) BBF96_04305 PF02515 CoA-transferase family III BBF96_04315 PF00795 Carbon-nitrogen hydrolase BBF96_04320 PF00881 Nitroreductase family BBF96_04335 PF05977 Transmembrane secretion effector BBF96_04350 PF02219 Methylenetetrahydrofolate reductase BBF96_04355 PF02607 B12 binding domain BBF96_04355 PF02965 Vitamin B12 dependent methionine synthase, activation domain BBF96_04355 PF00809 Pterin binding enzyme BBF96_04355 PF02310 B12 binding domain BBF96_04355 PF02574 Homocysteine S-methyltransferase BBF96_04370 PF00881 Nitroreductase family BBF96_04375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BBF96_04375 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_04380 PF01008 Initiation factor 2 subunit family BBF96_04385 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BBF96_04385 PF05221 S-adenosyl-L-homocysteine hydrolase BBF96_04390 PF01979 Amidohydrolase family BBF96_04395 PF04002 RadC-like JAB domain BBF96_04395 PF12826 Helix-hairpin-helix motif BBF96_04400 PF00440 Bacterial regulatory proteins, tetR family BBF96_04400 PF17938 Tetracyclin repressor-like, C-terminal domain BBF96_04415 PF00873 AcrB/AcrD/AcrF family BBF96_04440 PF00005 ABC transporter BBF96_04440 PF00664 ABC transporter transmembrane region BBF96_04445 PF01134 Glucose inhibited division protein A BBF96_04445 PF13932 GidA associated domain BBF96_04450 PF00092 von Willebrand factor type A domain BBF96_04455 PF03699 Uncharacterised protein family (UPF0182) BBF96_04460 PF05193 Peptidase M16 inactive domain BBF96_04465 PF05193 Peptidase M16 inactive domain BBF96_04465 PF00675 Insulinase (Peptidase family M16) BBF96_04470 PF00581 Rhodanese-like domain BBF96_04475 PF07690 Major Facilitator Superfamily BBF96_04485 PF00209 Sodium:neurotransmitter symporter family BBF96_04495 PF03315 Serine dehydratase beta chain BBF96_04495 PF01842 ACT domain BBF96_04500 PF03313 Serine dehydratase alpha chain BBF96_04505 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BBF96_04505 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BBF96_04515 PF13419 Haloacid dehalogenase-like hydrolase BBF96_04520 PF06071 Protein of unknown function (DUF933) BBF96_04520 PF01926 50S ribosome-binding GTPase BBF96_04525 PF02645 Uncharacterised protein, DegV family COG1307 BBF96_04530 PF12822 ECF transporter, substrate-specific component BBF96_04545 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BBF96_04545 PF00037 4Fe-4S binding domain BBF96_04545 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_04550 PF02256 Iron hydrogenase small subunit BBF96_04550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BBF96_04550 PF00037 4Fe-4S binding domain BBF96_04550 PF02906 Iron only hydrogenase large subunit, C-terminal domain BBF96_04555 PF16657 Maltogenic Amylase, C-terminal domain BBF96_04555 PF02903 Alpha amylase, N-terminal ig-like domain BBF96_04555 PF00128 Alpha amylase, catalytic domain BBF96_04560 PF01554 MatE BBF96_04565 PF01047 MarR family BBF96_04575 PF07670 Nucleoside recognition BBF96_04580 PF00206 Lyase BBF96_04580 PF14698 Argininosuccinate lyase C-terminal BBF96_04590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BBF96_04590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BBF96_04600 PF00689 Cation transporting ATPase, C-terminus BBF96_04600 PF00690 Cation transporter/ATPase, N-terminus BBF96_04605 PF13649 Methyltransferase domain BBF96_04615 PF01734 Patatin-like phospholipase BBF96_04620 PF05362 Lon protease (S16) C-terminal proteolytic domain BBF96_04620 PF13180 PDZ domain BBF96_04625 PF00753 Metallo-beta-lactamase superfamily BBF96_04625 PF16123 Hydroxyacylglutathione hydrolase C-terminus BBF96_04635 PF01515 Phosphate acetyl/butaryl transferase BBF96_04640 PF00871 Acetokinase family BBF96_04645 PF02620 Large ribosomal RNA subunit accumulation protein YceD BBF96_04650 PF01783 Ribosomal L32p protein family BBF96_04665 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BBF96_04665 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BBF96_04670 PF03060 Nitronate monooxygenase BBF96_04675 PF00698 Acyl transferase domain BBF96_04685 PF00550 Phosphopantetheine attachment site BBF96_04690 PF00109 Beta-ketoacyl synthase, N-terminal domain BBF96_04690 PF02801 Beta-ketoacyl synthase, C-terminal domain BBF96_04695 PF14622 Ribonuclease-III-like BBF96_04695 PF00035 Double-stranded RNA binding motif BBF96_04705 PF02224 Cytidylate kinase BBF96_04715 PF00575 S1 RNA binding domain BBF96_04715 PF02401 LytB protein BBF96_04725 PF07454 Stage II sporulation protein P (SpoIIP) BBF96_04730 PF14045 YIEGIA protein BBF96_04750 PF17820 PDZ domain BBF96_04750 PF02163 Peptidase family M50 BBF96_04755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BBF96_04755 PF01926 50S ribosome-binding GTPase BBF96_04760 PF02660 Glycerol-3-phosphate acyltransferase BBF96_04765 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BBF96_04765 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BBF96_04770 PF09547 Stage IV sporulation protein A (spore_IV_A) BBF96_04780 PF00216 Bacterial DNA-binding protein BBF96_04785 PF02080 TrkA-C domain BBF96_04785 PF02254 TrkA-N domain BBF96_04795 PF02386 Cation transport protein BBF96_04800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_04805 PF01189 16S rRNA methyltransferase RsmB/F BBF96_04805 PF17126 RsmF rRNA methyltransferase first C-terminal domain BBF96_04805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BBF96_04810 PF01479 S4 domain BBF96_04810 PF00849 RNA pseudouridylate synthase BBF96_04830 PF05343 M42 glutamyl aminopeptidase BBF96_04835 PF01066 CDP-alcohol phosphatidyltransferase BBF96_04865 PF00440 Bacterial regulatory proteins, tetR family BBF96_04865 PF08359 YsiA-like protein, C-terminal region BBF96_04880 PF13286 Phosphohydrolase-associated domain BBF96_04880 PF01966 HD domain BBF96_04885 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BBF96_04885 PF18277 AbrB C-terminal domain BBF96_04890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_04890 PF02743 Cache domain BBF96_04890 PF00672 HAMP domain BBF96_04905 PF00490 Delta-aminolevulinic acid dehydratase BBF96_04910 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_04910 PF17866 AAA lid domain BBF96_04930 PF17209 Hfq protein BBF96_04935 PF01678 Diaminopimelate epimerase BBF96_04940 PF00155 Aminotransferase class I and II BBF96_04945 PF02667 Short chain fatty acid transporter BBF96_04960 PF00005 ABC transporter BBF96_04965 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_04970 PF01726 LexA DNA binding domain BBF96_04970 PF00717 Peptidase S24-like BBF96_04975 PF01476 LysM domain BBF96_04990 PF02899 Phage integrase, N-terminal SAM-like domain BBF96_04990 PF00589 Phage integrase family BBF96_04995 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BBF96_04995 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BBF96_05000 PF02585 GlcNAc-PI de-N-acetylase BBF96_05005 PF00248 Aldo/keto reductase family BBF96_05010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BBF96_05010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BBF96_05015 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BBF96_05020 PF00364 Biotin-requiring enzyme BBF96_05030 PF01039 Carboxyl transferase domain BBF96_05045 PF01642 Methylmalonyl-CoA mutase BBF96_05045 PF02310 B12 binding domain BBF96_05060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBF96_05065 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BBF96_05065 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BBF96_05065 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BBF96_05075 PF03477 ATP cone domain BBF96_05080 PF04055 Radical SAM superfamily BBF96_05095 PF07690 Major Facilitator Superfamily BBF96_05100 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BBF96_05100 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BBF96_05100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBF96_05100 PF10371 Domain of unknown function BBF96_05100 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BBF96_05105 PF01554 MatE BBF96_05145 PF02585 GlcNAc-PI de-N-acetylase BBF96_05150 PF00877 NlpC/P60 family BBF96_05150 PF01476 LysM domain BBF96_05175 PF05343 M42 glutamyl aminopeptidase BBF96_05180 PF00588 SpoU rRNA Methylase family BBF96_05185 PF08241 Methyltransferase domain BBF96_05200 PF07486 Cell Wall Hydrolase BBF96_05200 PF01471 Putative peptidoglycan binding domain BBF96_05205 PF01139 tRNA-splicing ligase RtcB BBF96_05220 PF01012 Electron transfer flavoprotein domain BBF96_05220 PF00766 Electron transfer flavoprotein FAD-binding domain BBF96_05225 PF01012 Electron transfer flavoprotein domain BBF96_05230 PF02770 Acyl-CoA dehydrogenase, middle domain BBF96_05230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BBF96_05230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BBF96_05235 PF03632 Glycosyl hydrolase family 65 central catalytic domain BBF96_05235 PF03636 Glycosyl hydrolase family 65, N-terminal domain BBF96_05235 PF03633 Glycosyl hydrolase family 65, C-terminal domain BBF96_05240 PF13419 Haloacid dehalogenase-like hydrolase BBF96_05245 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BBF96_05245 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BBF96_05250 PF00862 Sucrose synthase BBF96_05250 PF00534 Glycosyl transferases group 1 BBF96_05255 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_05260 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_05265 PF01547 Bacterial extracellular solute-binding protein BBF96_05270 PF00294 pfkB family carbohydrate kinase BBF96_05275 PF00356 Bacterial regulatory proteins, lacI family BBF96_05285 PF00633 Helix-hairpin-helix motif BBF96_05285 PF00730 HhH-GPD superfamily base excision DNA repair protein BBF96_05290 PF14716 Helix-hairpin-helix domain BBF96_05290 PF14791 DNA polymerase beta thumb BBF96_05290 PF02811 PHP domain BBF96_05295 PF13419 Haloacid dehalogenase-like hydrolase BBF96_05340 PF00005 ABC transporter BBF96_05345 PF07478 D-ala D-ala ligase C-terminus BBF96_05345 PF01820 D-ala D-ala ligase N-terminus BBF96_05365 PF01467 Cytidylyltransferase-like BBF96_05375 PF00271 Helicase conserved C-terminal domain BBF96_05375 PF00270 DEAD/DEAH box helicase BBF96_05375 PF17191 RecG wedge domain BBF96_05380 PF02734 DAK2 domain BBF96_05380 PF13684 Dihydroxyacetone kinase family BBF96_05385 PF03780 Asp23 family, cell envelope-related function BBF96_05390 PF00830 Ribosomal L28 family BBF96_05395 PF01226 Formate/nitrite transporter BBF96_05400 PF12804 MobA-like NTP transferase domain BBF96_05405 PF02504 Fatty acid synthesis protein BBF96_05410 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BBF96_05415 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) BBF96_05420 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) BBF96_05425 PF04723 Glycine reductase complex selenoprotein A BBF96_05430 PF04723 Glycine reductase complex selenoprotein A BBF96_05435 PF09338 Glycine/sarcosine/betaine reductase component B subunits BBF96_05440 PF00085 Thioredoxin BBF96_05445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_05455 PF00390 Malic enzyme, N-terminal domain BBF96_05455 PF03949 Malic enzyme, NAD binding domain BBF96_05460 PF05683 Fumarase C-terminus BBF96_05465 PF05681 Fumarate hydratase (Fumerase) BBF96_05495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBF96_05495 PF02811 PHP domain BBF96_05495 PF14579 Helix-hairpin-helix motif BBF96_05495 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBF96_05505 PF01523 Putative modulator of DNA gyrase BBF96_05530 PF02447 GntP family permease BBF96_05535 PF02595 Glycerate kinase family BBF96_05540 PF13556 PucR C-terminal helix-turn-helix domain BBF96_05540 PF17853 GGDEF-like domain BBF96_05540 PF05651 Putative sugar diacid recognition BBF96_05545 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBF96_05545 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_05550 PF03099 Biotin/lipoate A/B protein ligase family BBF96_05555 PF06968 Biotin and Thiamin Synthesis associated domain BBF96_05555 PF04055 Radical SAM superfamily BBF96_05565 PF02347 Glycine cleavage system P-protein BBF96_05570 PF02347 Glycine cleavage system P-protein BBF96_05575 PF01597 Glycine cleavage H-protein BBF96_05580 PF01571 Aminomethyltransferase folate-binding domain BBF96_05580 PF08669 Glycine cleavage T-protein C-terminal barrel domain BBF96_05585 PF07676 WD40-like Beta Propeller Repeat BBF96_05585 PF04052 TolB amino-terminal domain BBF96_05600 PF04015 Domain of unknown function (DUF362) BBF96_05605 PF00324 Amino acid permease BBF96_05615 PF01435 Peptidase family M48 BBF96_05620 PF04055 Radical SAM superfamily BBF96_05625 PF11230 Protein of unknown function (DUF3029) BBF96_05630 PF01584 CheW-like domain BBF96_05645 PF12705 PD-(D/E)XK nuclease superfamily BBF96_05645 PF13361 UvrD-like helicase C-terminal domain BBF96_05645 PF00580 UvrD/REP helicase N-terminal domain BBF96_05665 PF05343 M42 glutamyl aminopeptidase BBF96_05670 PF00082 Subtilase family BBF96_05690 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BBF96_05690 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BBF96_05695 PF13185 GAF domain BBF96_05705 PF12911 N-terminal TM domain of oligopeptide transport permease C BBF96_05705 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_05710 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_05715 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_05725 PF01300 Telomere recombination BBF96_05725 PF07503 HypF finger BBF96_05725 PF00708 Acylphosphatase BBF96_05725 PF17788 HypF Kae1-like domain BBF96_05740 PF00348 Polyprenyl synthetase BBF96_05750 PF00586 AIR synthase related protein, N-terminal domain BBF96_05750 PF02769 AIR synthase related protein, C-terminal domain BBF96_05755 PF01924 Hydrogenase formation hypA family BBF96_05760 PF01455 HupF/HypC family BBF96_05765 PF00902 Sec-independent protein translocase protein (TatC) BBF96_05770 PF02416 mttA/Hcf106 family BBF96_05775 PF02492 CobW/HypB/UreG, nucleotide-binding domain BBF96_05780 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BBF96_05790 PF00374 Nickel-dependent hydrogenase BBF96_05795 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BBF96_05795 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BBF96_05800 PF13649 Methyltransferase domain BBF96_05815 PF09515 Thiamine transporter protein (Thia_YuaJ) BBF96_05820 PF00885 6,7-dimethyl-8-ribityllumazine synthase BBF96_05825 PF00925 GTP cyclohydrolase II BBF96_05825 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BBF96_05830 PF00677 Lumazine binding domain BBF96_05835 PF01872 RibD C-terminal domain BBF96_05835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BBF96_05840 PF00834 Ribulose-phosphate 3 epimerase family BBF96_05845 PF03193 RsgA GTPase BBF96_05845 PF16745 RsgA N-terminal domain BBF96_05850 PF03793 PASTA domain BBF96_05850 PF00069 Protein kinase domain BBF96_05860 PF00498 FHA domain BBF96_05870 PF01029 NusB family BBF96_05870 PF01189 16S rRNA methyltransferase RsmB/F BBF96_05880 PF04298 Putative neutral zinc metallopeptidase BBF96_05895 PF01327 Polypeptide deformylase BBF96_05900 PF18074 Primosomal protein N C-terminal domain BBF96_05900 PF00271 Helicase conserved C-terminal domain BBF96_05900 PF17764 3′ DNA-binding domain (3′BD) BBF96_05900 PF04851 Type III restriction enzyme, res subunit BBF96_05900 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BBF96_05910 PF09334 tRNA synthetases class I (M) BBF96_05915 PF02773 S-adenosylmethionine synthetase, C-terminal domain BBF96_05915 PF02772 S-adenosylmethionine synthetase, central domain BBF96_05915 PF00438 S-adenosylmethionine synthetase, N-terminal domain BBF96_05920 PF17746 SfsA N-terminal OB domain BBF96_05920 PF03749 Sugar fermentation stimulation protein RE domain BBF96_05925 PF01790 Prolipoprotein diacylglyceryl transferase BBF96_05935 PF02441 Flavoprotein BBF96_05935 PF04127 DNA / pantothenate metabolism flavoprotein BBF96_05940 PF01192 RNA polymerase Rpb6 BBF96_05945 PF00625 Guanylate kinase BBF96_05950 PF04025 Domain of unknown function (DUF370) BBF96_05955 PF08340 Domain of unknown function (DUF1732) BBF96_05955 PF03755 YicC-like family, N-terminal region BBF96_05970 PF00005 ABC transporter BBF96_05970 PF02687 FtsX-like permease family BBF96_05970 PF12704 MacB-like periplasmic core domain BBF96_05980 PF00005 ABC transporter BBF96_05980 PF02687 FtsX-like permease family BBF96_05980 PF12704 MacB-like periplasmic core domain BBF96_05995 PF13545 Crp-like helix-turn-helix domain BBF96_05995 PF00027 Cyclic nucleotide-binding domain BBF96_06005 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain BBF96_06005 PF02558 Ketopantoate reductase PanE/ApbA BBF96_06015 PF00009 Elongation factor Tu GTP binding domain BBF96_06015 PF03764 Elongation factor G, domain IV BBF96_06015 PF00679 Elongation factor G C-terminus BBF96_06015 PF14492 Elongation Factor G, domain II BBF96_06015 PF03144 Elongation factor Tu domain 2 BBF96_06020 PF03819 MazG nucleotide pyrophosphohydrolase domain BBF96_06030 PF00850 Histone deacetylase domain BBF96_06095 PF01676 Metalloenzyme superfamily BBF96_06095 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BBF96_06100 PF00156 Phosphoribosyl transferase domain BBF96_06105 PF01180 Dihydroorotate dehydrogenase BBF96_06110 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BBF96_06110 PF00175 Oxidoreductase NAD-binding domain BBF96_06115 PF02142 MGS-like domain BBF96_06115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBF96_06115 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BBF96_06120 PF00117 Glutamine amidotransferase class-I BBF96_06120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BBF96_06125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BBF96_06130 PF01979 Amidohydrolase family BBF96_06135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBF96_06135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBF96_06140 PF00156 Phosphoribosyl transferase domain BBF96_06145 PF00849 RNA pseudouridylate synthase BBF96_06145 PF01479 S4 domain BBF96_06150 PF01252 Signal peptidase (SPase) II BBF96_06155 PF01258 Prokaryotic dksA/traR C4-type zinc finger BBF96_06160 PF00881 Nitroreductase family BBF96_06180 PF01479 S4 domain BBF96_06180 PF17774 Putative RNA-binding domain in YlmH BBF96_06185 PF02325 YGGT family BBF96_06190 PF01168 Alanine racemase, N-terminal domain BBF96_06205 PF03477 ATP cone domain BBF96_06210 PF05239 PRC-barrel domain BBF96_06220 PF09551 Stage II sporulation protein R (spore_II_R) BBF96_06225 PF04539 Sigma-70 region 3 BBF96_06225 PF04545 Sigma-70, region 4 BBF96_06225 PF04542 Sigma-70 region 2 BBF96_06230 PF04542 Sigma-70 region 2 BBF96_06230 PF04545 Sigma-70, region 4 BBF96_06235 PF03419 Sporulation factor SpoIIGA BBF96_06240 PF12327 FtsZ family, C-terminal domain BBF96_06240 PF00091 Tubulin/FtsZ family, GTPase domain BBF96_06245 PF02491 SHS2 domain inserted in FTSA BBF96_06255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBF96_06260 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BBF96_06260 PF01565 FAD binding domain BBF96_06265 PF01225 Mur ligase family, catalytic domain BBF96_06265 PF08245 Mur ligase middle domain BBF96_06265 PF02875 Mur ligase family, glutamate ligase domain BBF96_06270 PF04101 Glycosyltransferase family 28 C-terminal domain BBF96_06270 PF03033 Glycosyltransferase family 28 N-terminal domain BBF96_06275 PF01098 Cell cycle protein BBF96_06280 PF02875 Mur ligase family, glutamate ligase domain BBF96_06280 PF08245 Mur ligase middle domain BBF96_06285 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BBF96_06285 PF00953 Glycosyl transferase family 4 BBF96_06290 PF01225 Mur ligase family, catalytic domain BBF96_06290 PF02875 Mur ligase family, glutamate ligase domain BBF96_06290 PF08245 Mur ligase middle domain BBF96_06295 PF02875 Mur ligase family, glutamate ligase domain BBF96_06295 PF01225 Mur ligase family, catalytic domain BBF96_06295 PF08245 Mur ligase middle domain BBF96_06300 PF03793 PASTA domain BBF96_06300 PF03717 Penicillin-binding Protein dimerisation domain BBF96_06300 PF00905 Penicillin binding protein transpeptidase domain BBF96_06310 PF01795 MraW methylase family BBF96_06315 PF02381 MraZ protein, putative antitoxin-like BBF96_06330 PF11798 IMS family HHH motif BBF96_06330 PF11799 impB/mucB/samB family C-terminal domain BBF96_06330 PF00817 impB/mucB/samB family BBF96_06335 PF01906 Putative heavy-metal-binding BBF96_06345 PF01820 D-ala D-ala ligase N-terminus BBF96_06345 PF07478 D-ala D-ala ligase C-terminus BBF96_06350 PF01475 Ferric uptake regulator family BBF96_06360 PF01979 Amidohydrolase family BBF96_06365 PF00860 Permease family BBF96_06445 PF02073 Thermophilic metalloprotease (M29) BBF96_06460 PF00085 Thioredoxin BBF96_06480 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component BBF96_06485 PF01869 BadF/BadG/BcrA/BcrD ATPase family BBF96_06515 PF01380 SIS domain BBF96_06520 PF01380 SIS domain BBF96_06540 PF00005 ABC transporter BBF96_06540 PF00664 ABC transporter transmembrane region BBF96_06550 PF00664 ABC transporter transmembrane region BBF96_06550 PF00005 ABC transporter BBF96_06555 PF00664 ABC transporter transmembrane region BBF96_06555 PF00005 ABC transporter BBF96_06560 PF00664 ABC transporter transmembrane region BBF96_06560 PF00005 ABC transporter BBF96_06590 PF01592 NifU-like N terminal domain BBF96_06595 PF00266 Aminotransferase class-V BBF96_06600 PF02082 Transcriptional regulator BBF96_06605 PF09186 Domain of unknown function (DUF1949) BBF96_06605 PF01205 Uncharacterized protein family UPF0029 BBF96_06610 PF05496 Holliday junction DNA helicase RuvB P-loop domain BBF96_06610 PF12002 MgsA AAA+ ATPase C terminal BBF96_06610 PF16193 AAA C-terminal domain BBF96_06615 PF01812 5-formyltetrahydrofolate cyclo-ligase family BBF96_06625 PF01336 OB-fold nucleic acid binding domain BBF96_06625 PF00152 tRNA synthetases class II (D, K and N) BBF96_06625 PF02938 GAD domain BBF96_06630 PF03129 Anticodon binding domain BBF96_06630 PF13393 Histidyl-tRNA synthetase BBF96_06635 PF05698 Bacterial trigger factor protein (TF) C-terminus BBF96_06640 PF04055 Radical SAM superfamily BBF96_06645 PF00753 Metallo-beta-lactamase superfamily BBF96_06650 PF02580 D-Tyr-tRNA(Tyr) deacylase BBF96_06655 PF04607 Region found in RelA / SpoT proteins BBF96_06655 PF13291 ACT domain BBF96_06655 PF02824 TGS domain BBF96_06660 PF00156 Phosphoribosyl transferase domain BBF96_06665 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BBF96_06665 PF17768 RecJ OB domain BBF96_06665 PF02272 DHHA1 domain BBF96_06665 PF01368 DHH family BBF96_06670 PF17099 Tryptophan transporter TrpP BBF96_06675 PF06305 Lipopolysaccharide assembly protein A domain BBF96_06680 PF02355 Protein export membrane protein BBF96_06680 PF07549 SecD/SecF GG Motif BBF96_06685 PF02355 Protein export membrane protein BBF96_06685 PF07549 SecD/SecF GG Motif BBF96_06710 PF00005 ABC transporter BBF96_06725 PF00196 Bacterial regulatory proteins, luxR family BBF96_06725 PF00072 Response regulator receiver domain BBF96_06730 PF05231 MASE1 BBF96_06730 PF07730 Histidine kinase BBF96_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_06735 PF10502 Signal peptidase, peptidase S26 BBF96_06740 PF02699 Preprotein translocase subunit BBF96_06745 PF01702 Queuine tRNA-ribosyltransferase BBF96_06750 PF02547 Queuosine biosynthesis protein BBF96_06760 PF05496 Holliday junction DNA helicase RuvB P-loop domain BBF96_06760 PF05491 RuvB C-terminal winged helix domain BBF96_06760 PF17864 RuvB AAA lid domain BBF96_06765 PF07499 RuvA, C-terminal domain BBF96_06765 PF01330 RuvA N terminal domain BBF96_06770 PF02075 Crossover junction endodeoxyribonuclease RuvC BBF96_06780 PF01709 Transcriptional regulator BBF96_06815 PF12697 Alpha/beta hydrolase family BBF96_06830 PF01784 NIF3 (NGG1p interacting factor 3) BBF96_06840 PF00294 pfkB family carbohydrate kinase BBF96_06845 PF04227 Indigoidine synthase A like protein BBF96_06860 PF08241 Methyltransferase domain BBF96_06875 PF16736 Single Cache-like BBF96_06875 PF00989 PAS fold BBF96_06875 PF00512 His Kinase A (phospho-acceptor) domain BBF96_06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_06880 PF00072 Response regulator receiver domain BBF96_06880 PF00486 Transcriptional regulatory protein, C terminal BBF96_06885 PF14045 YIEGIA protein BBF96_06895 PF01554 MatE BBF96_06900 PF02583 Metal-sensitive transcriptional repressor BBF96_06915 PF04542 Sigma-70 region 2 BBF96_06915 PF04539 Sigma-70 region 3 BBF96_06915 PF00140 Sigma-70 factor, region 1.2 BBF96_06915 PF03979 Sigma-70 factor, region 1.1 BBF96_06915 PF04545 Sigma-70, region 4 BBF96_06920 PF10410 DnaB-helicase binding domain of primase BBF96_06920 PF08275 DNA primase catalytic core, N-terminal domain BBF96_06920 PF01807 CHC2 zinc finger BBF96_06925 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BBF96_06930 PF01966 HD domain BBF96_06930 PF13286 Phosphohydrolase-associated domain BBF96_06935 PF00391 PEP-utilising enzyme, mobile domain BBF96_06935 PF02896 PEP-utilising enzyme, TIM barrel domain BBF96_06935 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BBF96_06940 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BBF96_06945 PF03618 Kinase/pyrophosphorylase BBF96_06950 PF08279 HTH domain BBF96_06950 PF00571 CBS domain BBF96_06955 PF03618 Kinase/pyrophosphorylase BBF96_06965 PF11967 Recombination protein O N terminal BBF96_06965 PF02565 Recombination protein O C terminal BBF96_06975 PF01791 DeoC/LacD family aldolase BBF96_06980 PF01926 50S ribosome-binding GTPase BBF96_06980 PF07650 KH domain BBF96_06985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BBF96_06990 PF11258 Protein of unknown function (DUF3048) N-terminal domain BBF96_06990 PF17479 Protein of unknown function (DUF3048) C-terminal domain BBF96_07000 PF01595 Cyclin M transmembrane N-terminal domain BBF96_07000 PF00571 CBS domain BBF96_07000 PF03471 Transporter associated domain BBF96_07005 PF01219 Prokaryotic diacylglycerol kinase BBF96_07010 PF02130 Uncharacterized protein family UPF0054 BBF96_07015 PF01966 HD domain BBF96_07015 PF07697 7TM-HD extracellular BBF96_07015 PF07698 7TM receptor with intracellular HD hydrolase BBF96_07020 PF02562 PhoH-like protein BBF96_07030 PF07873 YabP family BBF96_07035 PF04239 Protein of unknown function (DUF421) BBF96_07040 PF04239 Protein of unknown function (DUF421) BBF96_07050 PF12127 SigmaW regulon antibacterial BBF96_07055 PF01957 NfeD-like C-terminal, partner-binding BBF96_07055 PF01972 Serine dehydrogenase proteinase BBF96_07065 PF08281 Sigma-70, region 4 BBF96_07065 PF04542 Sigma-70 region 2 BBF96_07070 PF09424 Yqey-like protein BBF96_07080 PF01230 HIT domain BBF96_07085 PF04055 Radical SAM superfamily BBF96_07085 PF01938 TRAM domain BBF96_07085 PF00919 Uncharacterized protein family UPF0004 BBF96_07090 PF04452 RNA methyltransferase BBF96_07110 PF00226 DnaJ domain BBF96_07110 PF01556 DnaJ C terminal domain BBF96_07110 PF00684 DnaJ central domain BBF96_07115 PF00012 Hsp70 protein BBF96_07125 PF01628 HrcA protein C terminal domain BBF96_07130 PF04055 Radical SAM superfamily BBF96_07130 PF06969 HemN C-terminal domain BBF96_07155 PF03418 Germination protease BBF96_07165 PF01649 Ribosomal protein S20 BBF96_07170 PF06144 DNA polymerase III, delta subunit BBF96_07180 PF01758 Sodium Bile acid symporter family BBF96_07185 PF01022 Bacterial regulatory protein, arsR family BBF96_07200 PF01022 Bacterial regulatory protein, arsR family BBF96_07205 PF00269 Small, acid-soluble spore proteins, alpha/beta type BBF96_07210 PF01063 Amino-transferase class IV BBF96_07220 PF00117 Glutamine amidotransferase class-I BBF96_07225 PF02581 Thiamine monophosphate synthase BBF96_07230 PF01964 Radical SAM ThiC family BBF96_07235 PF02581 Thiamine monophosphate synthase BBF96_07240 PF06968 Biotin and Thiamin Synthesis associated domain BBF96_07240 PF04055 Radical SAM superfamily BBF96_07250 PF00581 Rhodanese-like domain BBF96_07250 PF00899 ThiF family BBF96_07255 PF02597 ThiS family BBF96_07255 PF05690 Thiazole biosynthesis protein ThiG BBF96_07260 PF00269 Small, acid-soluble spore proteins, alpha/beta type BBF96_07265 PF03772 Competence protein BBF96_07265 PF13567 Domain of unknown function (DUF4131) BBF96_07265 PF00753 Metallo-beta-lactamase superfamily BBF96_07280 PF03816 Cell envelope-related transcriptional attenuator domain BBF96_07285 PF01966 HD domain BBF96_07290 PF01467 Cytidylyltransferase-like BBF96_07315 PF00892 EamA-like transporter family BBF96_07330 PF10079 Bacillithiol biosynthesis BshC BBF96_07340 PF03841 L-seryl-tRNA selenium transferase BBF96_07340 PF12390 Selenocysteine synthase N terminal BBF96_07375 PF13610 DDE domain BBF96_07380 PF00005 ABC transporter BBF96_07380 PF00664 ABC transporter transmembrane region BBF96_07385 PF13180 PDZ domain BBF96_07395 PF03601 Conserved hypothetical protein 698 BBF96_07400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBF96_07400 PF03466 LysR substrate binding domain BBF96_07405 PF05225 helix-turn-helix, Psq domain BBF96_07405 PF02810 SEC-C motif BBF96_07410 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BBF96_07410 PF00037 4Fe-4S binding domain BBF96_07410 PF02256 Iron hydrogenase small subunit BBF96_07410 PF02906 Iron only hydrogenase large subunit, C-terminal domain BBF96_07415 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BBF96_07415 PF00037 4Fe-4S binding domain BBF96_07415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_07455 PF03063 Prismane/CO dehydrogenase family BBF96_07515 PF01882 Protein of unknown function DUF58 BBF96_07520 PF17863 AAA lid domain BBF96_07520 PF07726 ATPase family associated with various cellular activities (AAA) BBF96_07525 PF00011 Hsp20/alpha crystallin family BBF96_07545 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_07550 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_07570 PF04041 beta-1,4-mannooligosaccharide phosphorylase BBF96_07575 PF00356 Bacterial regulatory proteins, lacI family BBF96_07585 PF00474 Sodium:solute symporter family BBF96_07590 PF07687 Peptidase dimerisation domain BBF96_07590 PF01546 Peptidase family M20/M25/M40 BBF96_07610 PF00578 AhpC/TSA family BBF96_07615 PF02683 Cytochrome C biogenesis protein transmembrane region BBF96_07620 PF00873 AcrB/AcrD/AcrF family BBF96_07640 PF01212 Beta-eliminating lyase BBF96_07645 PF01430 Hsp33 protein BBF96_07650 PF04951 D-aminopeptidase BBF96_07655 PF07690 Major Facilitator Superfamily BBF96_07670 PF01926 50S ribosome-binding GTPase BBF96_07670 PF01018 GTP1/OBG BBF96_07670 PF09269 Domain of unknown function (DUF1967) BBF96_07675 PF01016 Ribosomal L27 protein BBF96_07685 PF00829 Ribosomal prokaryotic L21 protein BBF96_07690 PF10150 Ribonuclease E/G family BBF96_07690 PF00575 S1 RNA binding domain BBF96_07705 PF00571 CBS domain BBF96_07705 PF02163 Peptidase family M50 BBF96_07715 PF01098 Cell cycle protein BBF96_07720 PF03776 Septum formation topological specificity factor MinE BBF96_07725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BBF96_07730 PF03775 Septum formation inhibitor MinC, C-terminal domain BBF96_07735 PF00905 Penicillin binding protein transpeptidase domain BBF96_07735 PF03717 Penicillin-binding Protein dimerisation domain BBF96_07745 PF04085 rod shape-determining protein MreC BBF96_07755 PF04002 RadC-like JAB domain BBF96_07760 PF02545 Maf-like protein BBF96_07765 PF06463 Molybdenum Cofactor Synthesis C BBF96_07765 PF04055 Radical SAM superfamily BBF96_07770 PF00202 Aminotransferase class-III BBF96_07780 PF03900 Porphobilinogen deaminase, C-terminal domain BBF96_07780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BBF96_07785 PF14824 Sirohaem biosynthesis protein central BBF96_07785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBF96_07785 PF10414 Sirohaem synthase dimerisation region BBF96_07790 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BBF96_07790 PF01488 Shikimate / quinate 5-dehydrogenase BBF96_07790 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BBF96_07800 PF13187 4Fe-4S dicluster domain BBF96_07800 PF00037 4Fe-4S binding domain BBF96_07800 PF04060 Putative Fe-S cluster BBF96_07805 PF02508 Rnf-Nqr subunit, membrane protein BBF96_07810 PF02508 Rnf-Nqr subunit, membrane protein BBF96_07815 PF04205 FMN-binding domain BBF96_07820 PF03116 NQR2, RnfD, RnfE family BBF96_07825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_07825 PF13237 4Fe-4S dicluster domain BBF96_07825 PF13375 RnfC Barrel sandwich hybrid domain BBF96_07825 PF10531 SLBB domain BBF96_07830 PF10609 NUBPL iron-transfer P-loop NTPase BBF96_07835 PF10609 NUBPL iron-transfer P-loop NTPase BBF96_07845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BBF96_07865 PF02001 Protein of unknown function DUF134 BBF96_07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_07870 PF00989 PAS fold BBF96_07870 PF13426 PAS domain BBF96_07870 PF13188 PAS domain BBF96_07870 PF00512 His Kinase A (phospho-acceptor) domain BBF96_07885 PF00571 CBS domain BBF96_07885 PF00478 IMP dehydrogenase / GMP reductase domain BBF96_07900 PF02875 Mur ligase family, glutamate ligase domain BBF96_07900 PF08245 Mur ligase middle domain BBF96_07905 PF07969 Amidohydrolase family BBF96_07920 PF07194 P2 response regulator binding domain BBF96_07920 PF01627 Hpt domain BBF96_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_07920 PF02895 Signal transducing histidine kinase, homodimeric domain BBF96_07920 PF01584 CheW-like domain BBF96_07925 PF00486 Transcriptional regulatory protein, C terminal BBF96_07925 PF00072 Response regulator receiver domain BBF96_07930 PF01739 CheR methyltransferase, SAM binding domain BBF96_07930 PF03705 CheR methyltransferase, all-alpha domain BBF96_07940 PF00072 Response regulator receiver domain BBF96_07940 PF01339 CheB methylesterase BBF96_07945 PF01584 CheW-like domain BBF96_07950 PF00672 HAMP domain BBF96_07950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_07950 PF02743 Cache domain BBF96_07955 PF00072 Response regulator receiver domain BBF96_07965 PF01523 Putative modulator of DNA gyrase BBF96_07975 PF01042 Endoribonuclease L-PSP BBF96_07980 PF05223 NTF2-like N-terminal transpeptidase domain BBF96_07980 PF03717 Penicillin-binding Protein dimerisation domain BBF96_07980 PF00905 Penicillin binding protein transpeptidase domain BBF96_07985 PF04286 Protein of unknown function (DUF445) BBF96_07995 PF01368 DHH family BBF96_07995 PF17768 RecJ OB domain BBF96_07995 PF02272 DHHA1 domain BBF96_07995 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BBF96_08005 PF00580 UvrD/REP helicase N-terminal domain BBF96_08005 PF13361 UvrD-like helicase C-terminal domain BBF96_08015 PF04055 Radical SAM superfamily BBF96_08015 PF06463 Molybdenum Cofactor Synthesis C BBF96_08025 PF01209 ubiE/COQ5 methyltransferase family BBF96_08075 PF00872 Transposase, Mutator family BBF96_08110 PF01523 Putative modulator of DNA gyrase BBF96_08125 PF02310 B12 binding domain BBF96_08125 PF04055 Radical SAM superfamily BBF96_08140 PF12832 MFS_1 like family BBF96_08145 PF00133 tRNA synthetases class I (I, L, M and V) BBF96_08145 PF10458 Valyl tRNA synthetase tRNA binding arm BBF96_08145 PF08264 Anticodon-binding domain of tRNA BBF96_08155 PF00209 Sodium:neurotransmitter symporter family BBF96_08160 PF00300 Histidine phosphatase superfamily (branch 1) BBF96_08170 PF00270 DEAD/DEAH box helicase BBF96_08170 PF00271 Helicase conserved C-terminal domain BBF96_08170 PF09369 Domain of unknown function (DUF1998) BBF96_08175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BBF96_08175 PF03466 LysR substrate binding domain BBF96_08180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_08180 PF08447 PAS fold BBF96_08180 PF13426 PAS domain BBF96_08195 PF00535 Glycosyl transferase family 2 BBF96_08195 PF00534 Glycosyl transferases group 1 BBF96_08200 PF13181 Tetratricopeptide repeat BBF96_08200 PF00535 Glycosyl transferase family 2 BBF96_08205 PF00535 Glycosyl transferase family 2 BBF96_08210 PF00535 Glycosyl transferase family 2 BBF96_08210 PF13181 Tetratricopeptide repeat BBF96_08220 PF13649 Methyltransferase domain BBF96_08225 PF13302 Acetyltransferase (GNAT) domain BBF96_08255 PF01548 Transposase BBF96_08255 PF02371 Transposase IS116/IS110/IS902 family BBF96_08260 PF01926 50S ribosome-binding GTPase BBF96_08265 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_08265 PF02190 ATP-dependent protease La (LON) substrate-binding domain BBF96_08265 PF05362 Lon protease (S16) C-terminal proteolytic domain BBF96_08270 PF05362 Lon protease (S16) C-terminal proteolytic domain BBF96_08270 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_08275 PF00534 Glycosyl transferases group 1 BBF96_08280 PF00128 Alpha amylase, catalytic domain BBF96_08285 PF00356 Bacterial regulatory proteins, lacI family BBF96_08285 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BBF96_08290 PF06689 ClpX C4-type zinc finger BBF96_08290 PF10431 C-terminal, D2-small domain, of ClpB protein BBF96_08290 PF07724 AAA domain (Cdc48 subfamily) BBF96_08295 PF00574 Clp protease BBF96_08300 PF05698 Bacterial trigger factor protein (TF) C-terminus BBF96_08300 PF05697 Bacterial trigger factor protein (TF) BBF96_08300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BBF96_08315 PF01725 Ham1 family BBF96_08320 PF01138 3' exoribonuclease family, domain 1 BBF96_08320 PF03725 3' exoribonuclease family, domain 2 BBF96_08330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BBF96_08345 PF00005 ABC transporter BBF96_08345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_08350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_08350 PF00005 ABC transporter BBF96_08355 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_08360 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_08365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_08380 PF05034 Methylaspartate ammonia-lyase N-terminus BBF96_08380 PF07476 Methylaspartate ammonia-lyase C-terminus BBF96_08385 PF06368 Methylaspartate mutase E chain (MutE) BBF96_08390 PF13941 MutL protein BBF96_08395 PF02310 B12 binding domain BBF96_08400 PF01177 Asp/Glu/Hydantoin racemase BBF96_08405 PF00392 Bacterial regulatory proteins, gntR family BBF96_08425 PF11741 AMIN domain BBF96_08425 PF01520 N-acetylmuramoyl-L-alanine amidase BBF96_08430 PF17770 Ribonuclease J C-terminal domain BBF96_08430 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BBF96_08430 PF00753 Metallo-beta-lactamase superfamily BBF96_08455 PF07726 ATPase family associated with various cellular activities (AAA) BBF96_08455 PF17863 AAA lid domain BBF96_08465 PF00005 ABC transporter BBF96_08465 PF00664 ABC transporter transmembrane region BBF96_08480 PF10415 Fumarase C C-terminus BBF96_08480 PF00206 Lyase BBF96_08485 PF12631 MnmE helical domain BBF96_08485 PF10396 GTP-binding protein TrmE N-terminus BBF96_08485 PF01926 50S ribosome-binding GTPase BBF96_08490 PF00343 Carbohydrate phosphorylase BBF96_08490 PF11897 Protein of unknown function (DUF3417) BBF96_08495 PF02592 Putative vitamin uptake transporter BBF96_08500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BBF96_08505 PF02152 Dihydroneopterin aldolase BBF96_08510 PF00809 Pterin binding enzyme BBF96_08520 PF00128 Alpha amylase, catalytic domain BBF96_08520 PF03714 Bacterial pullanase-associated domain BBF96_08520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBF96_08540 PF00072 Response regulator receiver domain BBF96_08550 PF02915 Rubrerythrin BBF96_08555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_08555 PF00672 HAMP domain BBF96_08555 PF05227 CHASE3 domain BBF96_08560 PF00768 D-alanyl-D-alanine carboxypeptidase BBF96_08560 PF07943 Penicillin-binding protein 5, C-terminal domain BBF96_08570 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BBF96_08570 PF00591 Glycosyl transferase family, a/b domain BBF96_08570 PF02885 Glycosyl transferase family, helical bundle domain BBF96_08575 PF01048 Phosphorylase superfamily BBF96_08580 PF01676 Metalloenzyme superfamily BBF96_08590 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BBF96_08590 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BBF96_08595 PF01944 Stage II sporulation protein M BBF96_08610 PF00293 NUDIX domain BBF96_08620 PF01546 Peptidase family M20/M25/M40 BBF96_08620 PF07687 Peptidase dimerisation domain BBF96_08645 PF00871 Acetokinase family BBF96_08650 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BBF96_08650 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BBF96_08655 PF01515 Phosphate acetyl/butaryl transferase BBF96_08660 PF00871 Acetokinase family BBF96_08665 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BBF96_08665 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BBF96_08670 PF02954 Bacterial regulatory protein, Fis family BBF96_08670 PF00989 PAS fold BBF96_08670 PF00158 Sigma-54 interaction domain BBF96_08675 PF01699 Sodium/calcium exchanger protein BBF96_08695 PF00912 Transglycosylase BBF96_08695 PF00905 Penicillin binding protein transpeptidase domain BBF96_08705 PF02522 Aminoglycoside 3-N-acetyltransferase BBF96_08710 PF00942 Cellulose binding domain BBF96_08710 PF00150 Cellulase (glycosyl hydrolase family 5) BBF96_08720 PF01230 HIT domain BBF96_08820 PF01548 Transposase BBF96_08820 PF02371 Transposase IS116/IS110/IS902 family BBF96_08830 PF03527 RHS protein BBF96_08830 PF05593 RHS Repeat BBF96_08960 PF05593 RHS Repeat BBF96_08960 PF03527 RHS protein BBF96_09010 PF08769 Sporulation initiation factor Spo0A C terminal BBF96_09010 PF00072 Response regulator receiver domain BBF96_09015 PF17820 PDZ domain BBF96_09015 PF05580 SpoIVB peptidase S55 BBF96_09020 PF13476 AAA domain BBF96_09025 PF01316 Arginine repressor, DNA binding domain BBF96_09025 PF02863 Arginine repressor, C-terminal domain BBF96_09030 PF01513 ATP-NAD kinase BBF96_09035 PF01479 S4 domain BBF96_09035 PF01728 FtsJ-like methyltransferase BBF96_09040 PF02780 Transketolase, C-terminal domain BBF96_09040 PF02779 Transketolase, pyrimidine binding domain BBF96_09040 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BBF96_09050 PF00348 Polyprenyl synthetase BBF96_09055 PF02609 Exonuclease VII small subunit BBF96_09060 PF02601 Exonuclease VII, large subunit BBF96_09060 PF13742 OB-fold nucleic acid binding domain BBF96_09065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BBF96_09065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BBF96_09070 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_09070 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BBF96_09070 PF13247 4Fe-4S dicluster domain BBF96_09075 PF00175 Oxidoreductase NAD-binding domain BBF96_09075 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BBF96_09090 PF17910 FeoB cytosolic helical domain BBF96_09090 PF07664 Ferrous iron transport protein B C terminus BBF96_09090 PF04023 FeoA domain BBF96_09090 PF07670 Nucleoside recognition BBF96_09090 PF02421 Ferrous iron transport protein B BBF96_09100 PF04055 Radical SAM superfamily BBF96_09100 PF06968 Biotin and Thiamin Synthesis associated domain BBF96_09125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BBF96_09125 PF02906 Iron only hydrogenase large subunit, C-terminal domain BBF96_09125 PF00037 4Fe-4S binding domain BBF96_09125 PF02256 Iron hydrogenase small subunit BBF96_09130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BBF96_09130 PF00037 4Fe-4S binding domain BBF96_09130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_09145 PF00814 Glycoprotease family BBF96_09150 PF01029 NusB family BBF96_09165 PF03780 Asp23 family, cell envelope-related function BBF96_09170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BBF96_09170 PF00289 Biotin carboxylase, N-terminal domain BBF96_09170 PF02785 Biotin carboxylase C-terminal domain BBF96_09175 PF00364 Biotin-requiring enzyme BBF96_09195 PF09581 Stage III sporulation protein AF (Spore_III_AF) BBF96_09200 PF09546 Stage III sporulation protein AE (spore_III_AE) BBF96_09205 PF06686 Stage III sporulation protein AC/AD protein family BBF96_09225 PF01132 Elongation factor P (EF-P) OB domain BBF96_09225 PF08207 Elongation factor P (EF-P) KOW-like domain BBF96_09225 PF09285 Elongation factor P, C-terminal BBF96_09230 PF00005 ABC transporter BBF96_09240 PF02687 FtsX-like permease family BBF96_09240 PF00005 ABC transporter BBF96_09240 PF12704 MacB-like periplasmic core domain BBF96_09245 PF00005 ABC transporter BBF96_09245 PF02687 FtsX-like permease family BBF96_09245 PF12704 MacB-like periplasmic core domain BBF96_09260 PF01321 Creatinase/Prolidase N-terminal domain BBF96_09260 PF00557 Metallopeptidase family M24 BBF96_09265 PF01220 Dehydroquinase class II BBF96_09270 PF11741 AMIN domain BBF96_09270 PF00263 Bacterial type II and III secretion system protein BBF96_09270 PF03958 Bacterial type II/III secretion system short domain BBF96_09270 PF07660 Secretin and TonB N terminus short domain BBF96_09325 PF01478 Type IV leader peptidase family BBF96_09325 PF06750 Bacterial Peptidase A24 N-terminal domain BBF96_09330 PF08334 Type II secretion system (T2SS), protein G BBF96_09330 PF07963 Prokaryotic N-terminal methylation motif BBF96_09335 PF00482 Type II secretion system (T2SS), protein F BBF96_09340 PF00437 Type II/IV secretion system protein BBF96_09355 PF02223 Thymidylate kinase BBF96_09370 PF01212 Beta-eliminating lyase BBF96_09380 PF00027 Cyclic nucleotide-binding domain BBF96_09380 PF13545 Crp-like helix-turn-helix domain BBF96_09390 PF07670 Nucleoside recognition BBF96_09390 PF02421 Ferrous iron transport protein B BBF96_09390 PF17910 FeoB cytosolic helical domain BBF96_09390 PF07664 Ferrous iron transport protein B C terminus BBF96_09395 PF01475 Ferric uptake regulator family BBF96_09405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBF96_09410 PF18277 AbrB C-terminal domain BBF96_09410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BBF96_09425 PF11867 Domain of unknown function (DUF3387) BBF96_09425 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BBF96_09425 PF18766 SWI2/SNF2 ATPase BBF96_09435 PF01420 Type I restriction modification DNA specificity domain BBF96_09460 PF00005 ABC transporter BBF96_09465 PF00860 Permease family BBF96_09470 PF13382 Adenine deaminase C-terminal domain BBF96_09470 PF01979 Amidohydrolase family BBF96_09475 PF01180 Dihydroorotate dehydrogenase BBF96_09480 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BBF96_09485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BBF96_09485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BBF96_09490 PF01799 [2Fe-2S] binding domain BBF96_09490 PF00111 2Fe-2S iron-sulfur cluster binding domain BBF96_09495 PF03450 CO dehydrogenase flavoprotein C-terminal domain BBF96_09495 PF00941 FAD binding domain in molybdopterin dehydrogenase BBF96_09500 PF01979 Amidohydrolase family BBF96_09505 PF01979 Amidohydrolase family BBF96_09510 PF00464 Serine hydroxymethyltransferase BBF96_09515 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BBF96_09515 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BBF96_09520 PF01546 Peptidase family M20/M25/M40 BBF96_09520 PF07687 Peptidase dimerisation domain BBF96_09525 PF01381 Helix-turn-helix BBF96_09525 PF07883 Cupin domain BBF96_09530 PF00291 Pyridoxal-phosphate dependent enzyme BBF96_09545 PF01979 Amidohydrolase family BBF96_09555 PF02743 Cache domain BBF96_09555 PF00672 HAMP domain BBF96_09555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_09560 PF13416 Bacterial extracellular solute-binding protein BBF96_09570 PF01966 HD domain BBF96_09575 PF07486 Cell Wall Hydrolase BBF96_09575 PF01471 Putative peptidoglycan binding domain BBF96_09585 PF04545 Sigma-70, region 4 BBF96_09585 PF04542 Sigma-70 region 2 BBF96_09600 PF02618 YceG-like family BBF96_09610 PF03652 Holliday junction resolvase BBF96_09645 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BBF96_09645 PF01411 tRNA synthetases class II (A) BBF96_09645 PF02272 DHHA1 domain BBF96_09650 PF01594 AI-2E family transporter BBF96_09675 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BBF96_09675 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BBF96_09680 PF01799 [2Fe-2S] binding domain BBF96_09680 PF00111 2Fe-2S iron-sulfur cluster binding domain BBF96_09690 PF01145 SPFH domain / Band 7 family BBF96_09695 PF12221 Bacterial membrane protein N terminal BBF96_09695 PF01145 SPFH domain / Band 7 family BBF96_09700 PF08264 Anticodon-binding domain of tRNA BBF96_09700 PF00133 tRNA synthetases class I (I, L, M and V) BBF96_09700 PF13603 Leucyl-tRNA synthetase, Domain 2 BBF96_09700 PF09334 tRNA synthetases class I (M) BBF96_09710 PF13649 Methyltransferase domain BBF96_09715 PF00075 RNase H BBF96_09730 PF00005 ABC transporter BBF96_09730 PF09383 NIL domain BBF96_09740 PF00872 Transposase, Mutator family BBF96_09750 PF00128 Alpha amylase, catalytic domain BBF96_09750 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BBF96_09750 PF03714 Bacterial pullanase-associated domain BBF96_09755 PF01476 LysM domain BBF96_09760 PF02633 Creatinine amidohydrolase BBF96_09765 PF02491 SHS2 domain inserted in FTSA BBF96_09780 PF00248 Aldo/keto reductase family BBF96_09785 PF13419 Haloacid dehalogenase-like hydrolase BBF96_09815 PF00072 Response regulator receiver domain BBF96_09815 PF00990 Diguanylate cyclase, GGDEF domain BBF96_09825 PF00579 tRNA synthetases class I (W and Y) BBF96_09825 PF01479 S4 domain BBF96_09830 PF00912 Transglycosylase BBF96_09830 PF00905 Penicillin binding protein transpeptidase domain BBF96_09840 PF01713 Smr domain BBF96_09840 PF00488 MutS domain V BBF96_09845 PF02811 PHP domain BBF96_09845 PF14716 Helix-hairpin-helix domain BBF96_09845 PF14791 DNA polymerase beta thumb BBF96_09860 PF04055 Radical SAM superfamily BBF96_09860 PF06463 Molybdenum Cofactor Synthesis C BBF96_09870 PF03358 NADPH-dependent FMN reductase BBF96_09885 PF03483 B3/4 domain BBF96_09885 PF03147 Ferredoxin-fold anticodon binding domain BBF96_09885 PF03484 tRNA synthetase B5 domain BBF96_09885 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BBF96_09885 PF01588 Putative tRNA binding domain BBF96_09890 PF01409 tRNA synthetases class II core domain (F) BBF96_09890 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BBF96_09895 PF00588 SpoU rRNA Methylase family BBF96_09895 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBF96_09900 PF02254 TrkA-N domain BBF96_09900 PF02080 TrkA-C domain BBF96_09905 PF02386 Cation transport protein BBF96_09910 PF02080 TrkA-C domain BBF96_09910 PF02254 TrkA-N domain BBF96_09915 PF02386 Cation transport protein BBF96_09920 PF00453 Ribosomal protein L20 BBF96_09925 PF01632 Ribosomal protein L35 BBF96_09930 PF05198 Translation initiation factor IF-3, N-terminal domain BBF96_09930 PF00707 Translation initiation factor IF-3, C-terminal domain BBF96_09940 PF00005 ABC transporter BBF96_09940 PF00664 ABC transporter transmembrane region BBF96_09945 PF00664 ABC transporter transmembrane region BBF96_09945 PF00005 ABC transporter BBF96_09955 PF04286 Protein of unknown function (DUF445) BBF96_09970 PF03772 Competence protein BBF96_09970 PF00753 Metallo-beta-lactamase superfamily BBF96_09970 PF13567 Domain of unknown function (DUF4131) BBF96_10030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_10035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_10035 PF00005 ABC transporter BBF96_10040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_10040 PF00005 ABC transporter BBF96_10045 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10045 PF12911 N-terminal TM domain of oligopeptide transport permease C BBF96_10050 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_10075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_10075 PF00005 ABC transporter BBF96_10080 PF00005 ABC transporter BBF96_10080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_10095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_10110 PF01523 Putative modulator of DNA gyrase BBF96_10115 PF18693 TRAM domain BBF96_10115 PF00919 Uncharacterized protein family UPF0004 BBF96_10115 PF04055 Radical SAM superfamily BBF96_10120 PF13186 Iron-sulfur cluster-binding domain BBF96_10120 PF04055 Radical SAM superfamily BBF96_10125 PF06463 Molybdenum Cofactor Synthesis C BBF96_10125 PF04055 Radical SAM superfamily BBF96_10135 PF00664 ABC transporter transmembrane region BBF96_10135 PF00005 ABC transporter BBF96_10140 PF00005 ABC transporter BBF96_10140 PF00664 ABC transporter transmembrane region BBF96_10145 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_10145 PF00005 ABC transporter BBF96_10150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BBF96_10150 PF00005 ABC transporter BBF96_10165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_10170 PF13722 5TM C-terminal transporter carbon starvation CstA BBF96_10170 PF02554 Carbon starvation protein CstA BBF96_10175 PF01464 Transglycosylase SLT domain BBF96_10175 PF10145 Phage-related minor tail protein BBF96_10175 PF01551 Peptidase family M23 BBF96_10180 PF02142 MGS-like domain BBF96_10185 PF01121 Dephospho-CoA kinase BBF96_10190 PF02659 Putative manganese efflux pump BBF96_10195 PF00005 ABC transporter BBF96_10195 PF12848 ABC transporter BBF96_10195 PF16326 ABC transporter C-terminal domain BBF96_10200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BBF96_10200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BBF96_10200 PF06827 Zinc finger found in FPG and IleRS BBF96_10240 PF01523 Putative modulator of DNA gyrase BBF96_10245 PF01523 Putative modulator of DNA gyrase BBF96_10275 PF01523 Putative modulator of DNA gyrase BBF96_10285 PF00005 ABC transporter BBF96_10290 PF02310 B12 binding domain BBF96_10290 PF13282 Domain of unknown function (DUF4070) BBF96_10290 PF04055 Radical SAM superfamily BBF96_10320 PF04055 Radical SAM superfamily BBF96_10320 PF13186 Iron-sulfur cluster-binding domain BBF96_10340 PF00005 ABC transporter BBF96_10345 PF13407 Periplasmic binding protein domain BBF96_10350 PF02653 Branched-chain amino acid transport system / permease component BBF96_10355 PF00005 ABC transporter BBF96_10360 PF05025 RbsD / FucU transport protein family BBF96_10365 PF00294 pfkB family carbohydrate kinase BBF96_10370 PF00356 Bacterial regulatory proteins, lacI family BBF96_10375 PF00375 Sodium:dicarboxylate symporter family BBF96_10385 PF00245 Alkaline phosphatase BBF96_10395 PF16916 Dimerisation domain of Zinc Transporter BBF96_10395 PF01545 Cation efflux family BBF96_10410 PF01301 Glycosyl hydrolases family 35 BBF96_10415 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10420 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10425 PF13416 Bacterial extracellular solute-binding protein BBF96_10430 PF06452 Carbohydrate family 9 binding domain-like BBF96_10430 PF00331 Glycosyl hydrolase family 10 BBF96_10430 PF00395 S-layer homology domain BBF96_10430 PF02018 Carbohydrate binding domain BBF96_10435 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BBF96_10435 PF06165 Glycosyltransferase family 36 BBF96_10435 PF10091 Putative glucoamylase BBF96_10440 PF00356 Bacterial regulatory proteins, lacI family BBF96_10480 PF00929 Exonuclease BBF96_10480 PF02811 PHP domain BBF96_10480 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBF96_10480 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBF96_10480 PF14579 Helix-hairpin-helix motif BBF96_10490 PF01547 Bacterial extracellular solute-binding protein BBF96_10495 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10500 PF08402 TOBE domain BBF96_10500 PF00005 ABC transporter BBF96_10505 PF17202 Single cache domain 3 BBF96_10505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_10505 PF00672 HAMP domain BBF96_10540 PF00483 Nucleotidyl transferase BBF96_10540 PF01050 Mannose-6-phosphate isomerase BBF96_10545 PF00534 Glycosyl transferases group 1 BBF96_10545 PF13439 Glycosyltransferase Family 4 BBF96_10565 PF08281 Sigma-70, region 4 BBF96_10565 PF04542 Sigma-70 region 2 BBF96_10575 PF03734 L,D-transpeptidase catalytic domain BBF96_10575 PF01476 LysM domain BBF96_10630 PF01546 Peptidase family M20/M25/M40 BBF96_10635 PF01106 NifU-like domain BBF96_10650 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10655 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_10660 PF01547 Bacterial extracellular solute-binding protein BBF96_10665 PF00356 Bacterial regulatory proteins, lacI family BBF96_10675 PF13419 Haloacid dehalogenase-like hydrolase BBF96_10680 PF06133 Control of competence regulator ComK, YlbF/YmcA BBF96_10690 PF06962 Putative rRNA methylase BBF96_10705 PF00491 Arginase family BBF96_10710 PF17284 Spermidine synthase tetramerisation domain BBF96_10720 PF02675 S-adenosylmethionine decarboxylase BBF96_10745 PF14620 YpeB sporulation BBF96_10750 PF07486 Cell Wall Hydrolase BBF96_10750 PF01471 Putative peptidoglycan binding domain BBF96_10765 PF04463 Protein of unknown function (DUF523) BBF96_10780 PF02082 Transcriptional regulator BBF96_10785 PF01470 Pyroglutamyl peptidase BBF96_10790 PF08331 Domain of unknown function (DUF1730) BBF96_10800 PF17785 PUA-like domain BBF96_10800 PF10672 S-adenosylmethionine-dependent methyltransferase BBF96_10810 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BBF96_10810 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BBF96_10815 PF00156 Phosphoribosyl transferase domain BBF96_10820 PF04851 Type III restriction enzyme, res subunit BBF96_10820 PF00271 Helicase conserved C-terminal domain BBF96_10825 PF04542 Sigma-70 region 2 BBF96_10825 PF08281 Sigma-70, region 4 BBF96_10830 PF01047 MarR family BBF96_10840 PF13545 Crp-like helix-turn-helix domain BBF96_10840 PF00027 Cyclic nucleotide-binding domain BBF96_10850 PF00211 Adenylate and Guanylate cyclase catalytic domain BBF96_10850 PF00072 Response regulator receiver domain BBF96_10885 PF02119 Flagellar P-ring protein BBF96_10890 PF02107 Flagellar L-ring protein BBF96_10900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBF96_10900 PF00460 Flagella basal body rod protein BBF96_10905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBF96_10905 PF00460 Flagella basal body rod protein BBF96_10930 PF04545 Sigma-70, region 4 BBF96_10930 PF04539 Sigma-70 region 3 BBF96_10930 PF04542 Sigma-70 region 2 BBF96_10945 PF10609 NUBPL iron-transfer P-loop NTPase BBF96_10950 PF00448 SRP54-type protein, GTPase domain BBF96_10955 PF00771 FHIPEP family BBF96_10960 PF01312 FlhB HrpN YscU SpaS Family BBF96_10965 PF01311 Bacterial export proteins, family 1 BBF96_10970 PF01313 Bacterial export proteins, family 3 BBF96_10975 PF00813 FliP family BBF96_10990 PF04509 CheC-like family BBF96_10990 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BBF96_10995 PF02154 Flagellar motor switch protein FliM BBF96_10995 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BBF96_11005 PF00691 OmpA family BBF96_11005 PF13677 Membrane MotB of proton-channel complex MotA/MotB BBF96_11010 PF01618 MotA/TolQ/ExbB proton channel family BBF96_11015 PF06289 Flagellar and Swarming motility proteins BBF96_11020 PF07559 Flagellar basal body protein FlaE BBF96_11020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBF96_11020 PF00460 Flagella basal body rod protein BBF96_11030 PF03963 Flagellar hook capping protein - N-terminal region BBF96_11045 PF02050 Flagellar FliJ protein BBF96_11050 PF18269 T3SS EscN ATPase C-terminal domain BBF96_11050 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBF96_11050 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBF96_11055 PF02108 Flagellar assembly protein FliH BBF96_11060 PF01706 FliG C-terminal domain BBF96_11060 PF14841 FliG middle domain BBF96_11060 PF14842 FliG N-terminal domain BBF96_11065 PF08345 Flagellar M-ring protein C-terminal BBF96_11065 PF01514 Secretory protein of YscJ/FliF family BBF96_11070 PF02049 Flagellar hook-basal body complex protein FliE BBF96_11075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBF96_11075 PF00460 Flagella basal body rod protein BBF96_11080 PF00460 Flagella basal body rod protein BBF96_11085 PF00483 Nucleotidyl transferase BBF96_11095 PF02350 UDP-N-acetylglucosamine 2-epimerase BBF96_11100 PF03102 NeuB family BBF96_11100 PF08666 SAF domain BBF96_11105 PF02348 Cytidylyltransferase BBF96_11110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BBF96_11115 PF16363 GDP-mannose 4,6 dehydratase BBF96_11125 PF02561 Flagellar protein FliS BBF96_11145 PF07195 Flagellar hook-associated protein 2 C-terminus BBF96_11145 PF02465 Flagellar hook-associated protein 2 N-terminus BBF96_11145 PF07196 Flagellin hook IN motif BBF96_11150 PF03646 FlaG protein BBF96_11155 PF00700 Bacterial flagellin C-terminal helical region BBF96_11155 PF00669 Bacterial flagellin N-terminal helical region BBF96_11160 PF02599 Global regulator protein family BBF96_11165 PF02623 FliW protein BBF96_11175 PF00700 Bacterial flagellin C-terminal helical region BBF96_11175 PF00669 Bacterial flagellin N-terminal helical region BBF96_11180 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BBF96_11180 PF00460 Flagella basal body rod protein BBF96_11200 PF00485 Phosphoribulokinase / Uridine kinase family BBF96_11205 PF00202 Aminotransferase class-III BBF96_11225 PF00082 Subtilase family BBF96_11235 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BBF96_11235 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BBF96_11235 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BBF96_11235 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BBF96_11240 PF01238 Phosphomannose isomerase type I BBF96_11265 PF00342 Phosphoglucose isomerase BBF96_11270 PF16363 GDP-mannose 4,6 dehydratase BBF96_11290 PF03023 Lipid II flippase MurJ BBF96_11295 PF01467 Cytidylyltransferase-like BBF96_11300 PF04991 LicD family BBF96_11315 PF02350 UDP-N-acetylglucosamine 2-epimerase BBF96_11320 PF01370 NAD dependent epimerase/dehydratase family BBF96_11325 PF08485 Polysaccharide biosynthesis protein C-terminal BBF96_11325 PF02719 Polysaccharide biosynthesis protein BBF96_11330 PF13579 Glycosyl transferase 4-like domain BBF96_11340 PF02397 Bacterial sugar transferase BBF96_11350 PF02719 Polysaccharide biosynthesis protein BBF96_11370 PF00395 S-layer homology domain BBF96_11380 PF11283 Protein of unknown function (DUF3084) BBF96_11390 PF00005 ABC transporter BBF96_11405 PF00483 Nucleotidyl transferase BBF96_11415 PF00005 ABC transporter BBF96_11415 PF00664 ABC transporter transmembrane region BBF96_11420 PF00535 Glycosyl transferase family 2 BBF96_11430 PF02684 Lipid-A-disaccharide synthetase BBF96_11435 PF06230 LpxI C-terminal domain BBF96_11435 PF17930 LpxI N-terminal domain BBF96_11440 PF00132 Bacterial transferase hexapeptide (six repeats) BBF96_11440 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BBF96_11445 PF07977 FabA-like domain BBF96_11455 PF00005 ABC transporter BBF96_11505 PF00872 Transposase, Mutator family BBF96_11515 PF00872 Transposase, Mutator family BBF96_11520 PF02350 UDP-N-acetylglucosamine 2-epimerase BBF96_11540 PF00082 Subtilase family BBF96_11560 PF00132 Bacterial transferase hexapeptide (six repeats) BBF96_11560 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BBF96_11585 PF07244 Surface antigen variable number repeat BBF96_11585 PF01103 Surface antigen BBF96_11600 PF01966 HD domain BBF96_11605 PF04545 Sigma-70, region 4 BBF96_11605 PF04539 Sigma-70 region 3 BBF96_11605 PF00140 Sigma-70 factor, region 1.2 BBF96_11605 PF04542 Sigma-70 region 2 BBF96_11605 PF03979 Sigma-70 factor, region 1.1 BBF96_11625 PF12116 Stage III sporulation protein D BBF96_11635 PF08486 Stage II sporulation protein BBF96_11640 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBF96_11650 PF01925 Sulfite exporter TauE/SafE BBF96_11680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_11680 PF02743 Cache domain BBF96_11680 PF00672 HAMP domain BBF96_11690 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BBF96_11690 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BBF96_11695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBF96_11695 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBF96_11700 PF00231 ATP synthase BBF96_11705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBF96_11705 PF02874 ATP synthase alpha/beta family, beta-barrel domain BBF96_11705 PF00306 ATP synthase alpha/beta chain, C terminal domain BBF96_11710 PF00213 ATP synthase delta (OSCP) subunit BBF96_11715 PF00430 ATP synthase B/B' CF(0) BBF96_11720 PF00137 ATP synthase subunit C BBF96_11725 PF00119 ATP synthase A chain BBF96_11745 PF00953 Glycosyl transferase family 4 BBF96_11760 PF02502 Ribose/Galactose Isomerase BBF96_11765 PF01451 Low molecular weight phosphotyrosine protein phosphatase BBF96_11770 PF02659 Putative manganese efflux pump BBF96_11775 PF03481 Putative GTP-binding controlling metal-binding BBF96_11775 PF01300 Telomere recombination BBF96_11785 PF05175 Methyltransferase small domain BBF96_11785 PF17827 PrmC N-terminal domain BBF96_11790 PF00472 RF-1 domain BBF96_11790 PF03462 PCRF domain BBF96_11795 PF07136 Protein of unknown function (DUF1385) BBF96_11800 PF00265 Thymidine kinase BBF96_11805 PF00672 HAMP domain BBF96_11805 PF02743 Cache domain BBF96_11805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_11810 PF01197 Ribosomal protein L31 BBF96_11815 PF01551 Peptidase family M23 BBF96_11820 PF07497 Rho termination factor, RNA-binding domain BBF96_11820 PF07498 Rho termination factor, N-terminal domain BBF96_11820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BBF96_11855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BBF96_11855 PF01502 Phosphoribosyl-AMP cyclohydrolase BBF96_11860 PF00977 Histidine biosynthesis protein BBF96_11865 PF00977 Histidine biosynthesis protein BBF96_11870 PF00117 Glutamine amidotransferase class-I BBF96_11875 PF00475 Imidazoleglycerol-phosphate dehydratase BBF96_11880 PF00155 Aminotransferase class I and II BBF96_11885 PF00815 Histidinol dehydrogenase BBF96_11890 PF01634 ATP phosphoribosyltransferase BBF96_11895 PF13393 Histidyl-tRNA synthetase BBF96_11900 PF02811 PHP domain BBF96_11910 PF01116 Fructose-bisphosphate aldolase class-II BBF96_11935 PF02743 Cache domain BBF96_11935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_11935 PF00672 HAMP domain BBF96_11960 PF02310 B12 binding domain BBF96_11960 PF04055 Radical SAM superfamily BBF96_11990 PF00117 Glutamine amidotransferase class-I BBF96_11990 PF06418 CTP synthase N-terminus BBF96_12020 PF00990 Diguanylate cyclase, GGDEF domain BBF96_12020 PF08448 PAS fold BBF96_12025 PF00378 Enoyl-CoA hydratase/isomerase BBF96_12030 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BBF96_12030 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BBF96_12035 PF02803 Thiolase, C-terminal domain BBF96_12035 PF00108 Thiolase, N-terminal domain BBF96_12040 PF01144 Coenzyme A transferase BBF96_12045 PF01144 Coenzyme A transferase BBF96_12050 PF05853 beta-keto acid cleavage enzyme BBF96_12055 PF03061 Thioesterase superfamily BBF96_12060 PF07969 Amidohydrolase family BBF96_12065 PF02310 B12 binding domain BBF96_12065 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase BBF96_12070 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit BBF96_12075 PF00488 MutS domain V BBF96_12075 PF01713 Smr domain BBF96_12125 PF12704 MacB-like periplasmic core domain BBF96_12125 PF02687 FtsX-like permease family BBF96_12125 PF00005 ABC transporter BBF96_12130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_12130 PF00512 His Kinase A (phospho-acceptor) domain BBF96_12130 PF00989 PAS fold BBF96_12130 PF16736 Single Cache-like BBF96_12135 PF00072 Response regulator receiver domain BBF96_12135 PF00486 Transcriptional regulatory protein, C terminal BBF96_12150 PF12704 MacB-like periplasmic core domain BBF96_12150 PF02687 FtsX-like permease family BBF96_12150 PF00005 ABC transporter BBF96_12155 PF00005 ABC transporter BBF96_12215 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BBF96_12215 PF10135 Rod binding protein BBF96_12340 PF00263 Bacterial type II and III secretion system protein BBF96_12340 PF03958 Bacterial type II/III secretion system short domain BBF96_12345 PF00158 Sigma-54 interaction domain BBF96_12345 PF00989 PAS fold BBF96_12345 PF02954 Bacterial regulatory protein, Fis family BBF96_12350 PF02417 Chromate transporter BBF96_12355 PF02417 Chromate transporter BBF96_12360 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BBF96_12360 PF00037 4Fe-4S binding domain BBF96_12360 PF02256 Iron hydrogenase small subunit BBF96_12360 PF02906 Iron only hydrogenase large subunit, C-terminal domain BBF96_12365 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_12365 PF00037 4Fe-4S binding domain BBF96_12365 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BBF96_12390 PF00282 Pyridoxal-dependent decarboxylase conserved domain BBF96_12395 PF00248 Aldo/keto reductase family BBF96_12405 PF02540 NAD synthase BBF96_12410 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BBF96_12410 PF15714 Stage V sporulation protein T C-terminal, transcription factor BBF96_12440 PF03323 Bacillus/Clostridium GerA spore germination protein BBF96_12455 PF05067 Manganese containing catalase BBF96_12460 PF12652 CotJB protein BBF96_12470 PF02554 Carbon starvation protein CstA BBF96_12475 PF00072 Response regulator receiver domain BBF96_12475 PF04397 LytTr DNA-binding domain BBF96_12480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_12480 PF13492 GAF domain BBF96_12480 PF07694 5TMR of 5TMR-LYT BBF96_12480 PF06580 Histidine kinase BBF96_12495 PF03845 Spore germination protein BBF96_12500 PF03323 Bacillus/Clostridium GerA spore germination protein BBF96_12515 PF00465 Iron-containing alcohol dehydrogenase BBF96_12520 PF00128 Alpha amylase, catalytic domain BBF96_12520 PF02903 Alpha amylase, N-terminal ig-like domain BBF96_12520 PF16657 Maltogenic Amylase, C-terminal domain BBF96_12530 PF03600 Citrate transporter BBF96_12535 PF10057 Uncharacterized conserved protein (DUF2294) BBF96_12540 PF00392 Bacterial regulatory proteins, gntR family BBF96_12540 PF00155 Aminotransferase class I and II BBF96_12545 PF01680 SOR/SNZ family BBF96_12550 PF01174 SNO glutamine amidotransferase family BBF96_12560 PF00465 Iron-containing alcohol dehydrogenase BBF96_12570 PF12838 4Fe-4S dicluster domain BBF96_12570 PF02256 Iron hydrogenase small subunit BBF96_12570 PF02906 Iron only hydrogenase large subunit, C-terminal domain BBF96_12605 PF02915 Rubrerythrin BBF96_12610 PF00990 Diguanylate cyclase, GGDEF domain BBF96_12610 PF05230 MASE2 domain BBF96_12615 PF14667 Polysaccharide biosynthesis C-terminal domain BBF96_12615 PF01943 Polysaccharide biosynthesis protein BBF96_12630 PF01053 Cys/Met metabolism PLP-dependent enzyme BBF96_12635 PF04307 LexA-binding, inner membrane-associated putative hydrolase BBF96_12645 PF00731 AIR carboxylase BBF96_12650 PF02540 NAD synthase BBF96_12665 PF18030 RimK PreATP-grasp domain BBF96_12665 PF08443 RimK-like ATP-grasp domain BBF96_12695 PF01761 3-dehydroquinate synthase BBF96_12700 PF01202 Shikimate kinase BBF96_12705 PF01264 Chorismate synthase BBF96_12710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BBF96_12710 PF08501 Shikimate dehydrogenase substrate binding domain BBF96_12710 PF01488 Shikimate / quinate 5-dehydrogenase BBF96_12715 PF01817 Chorismate mutase type II BBF96_12715 PF00800 Prephenate dehydratase BBF96_12715 PF01842 ACT domain BBF96_12720 PF02153 Prephenate dehydrogenase BBF96_12725 PF00793 DAHP synthetase I family BBF96_12725 PF18152 DAHP synthase ferredoxin-like domain BBF96_12730 PF00155 Aminotransferase class I and II BBF96_12735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BBF96_12740 PF05746 DALR anticodon binding domain BBF96_12740 PF00750 tRNA synthetases class I (R) BBF96_12740 PF03485 Arginyl tRNA synthetase N terminal domain BBF96_12765 PF00749 tRNA synthetases class I (E and Q), catalytic domain BBF96_12770 PF02535 ZIP Zinc transporter BBF96_12775 PF00512 His Kinase A (phospho-acceptor) domain BBF96_12775 PF13188 PAS domain BBF96_12775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_12775 PF00989 PAS fold BBF96_12775 PF13426 PAS domain BBF96_12780 PF00072 Response regulator receiver domain BBF96_12790 PF00082 Subtilase family BBF96_12790 PF05922 Peptidase inhibitor I9 BBF96_12805 PF00892 EamA-like transporter family BBF96_12830 PF01209 ubiE/COQ5 methyltransferase family BBF96_12845 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBF96_12845 PF14572 Phosphoribosyl synthetase-associated domain BBF96_12855 PF00005 ABC transporter BBF96_12895 PF02590 Predicted SPOUT methyltransferase BBF96_12900 PF17099 Tryptophan transporter TrpP BBF96_12905 PF13180 PDZ domain BBF96_12910 PF00753 Metallo-beta-lactamase superfamily BBF96_12915 PF00072 Response regulator receiver domain BBF96_12915 PF01339 CheB methylesterase BBF96_12920 PF03705 CheR methyltransferase, all-alpha domain BBF96_12920 PF01739 CheR methyltransferase, SAM binding domain BBF96_12930 PF16360 GTP-binding GTPase Middle Region BBF96_12930 PF13167 GTP-binding GTPase N-terminal BBF96_12930 PF01926 50S ribosome-binding GTPase BBF96_12935 PF02629 CoA binding domain BBF96_12935 PF06971 Putative DNA-binding protein N-terminus BBF96_12945 PF02517 CPBP intramembrane metalloprotease BBF96_12950 PF00512 His Kinase A (phospho-acceptor) domain BBF96_12950 PF00989 PAS fold BBF96_12950 PF16736 Single Cache-like BBF96_12950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_12955 PF00486 Transcriptional regulatory protein, C terminal BBF96_12955 PF00072 Response regulator receiver domain BBF96_12960 PF07669 Eco57I restriction-modification methylase BBF96_12975 PF00551 Formyl transferase BBF96_12980 PF02769 AIR synthase related protein, C-terminal domain BBF96_12980 PF00586 AIR synthase related protein, N-terminal domain BBF96_12985 PF00156 Phosphoribosyl transferase domain BBF96_12990 PF02769 AIR synthase related protein, C-terminal domain BBF96_12990 PF00586 AIR synthase related protein, N-terminal domain BBF96_12990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BBF96_13000 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BBF96_13010 PF10397 Adenylosuccinate lyase C-terminus BBF96_13010 PF00206 Lyase BBF96_13025 PF03477 ATP cone domain BBF96_13025 PF02867 Ribonucleotide reductase, barrel domain BBF96_13025 PF00317 Ribonucleotide reductase, all-alpha domain BBF96_13030 PF03109 ABC1 family BBF96_13045 PF07690 Major Facilitator Superfamily BBF96_13060 PF03009 Glycerophosphoryl diester phosphodiesterase family BBF96_13070 PF01734 Patatin-like phospholipase BBF96_13075 PF00731 AIR carboxylase BBF96_13080 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BBF96_13080 PF02843 Phosphoribosylglycinamide synthetase, C domain BBF96_13080 PF02844 Phosphoribosylglycinamide synthetase, N domain BBF96_13085 PF00709 Adenylosuccinate synthetase BBF96_13090 PF10397 Adenylosuccinate lyase C-terminus BBF96_13090 PF00206 Lyase BBF96_13095 PF01817 Chorismate mutase type II BBF96_13095 PF00793 DAHP synthetase I family BBF96_13115 PF02310 B12 binding domain BBF96_13115 PF04055 Radical SAM superfamily BBF96_13145 PF01695 IstB-like ATP binding protein BBF96_13150 PF03796 DnaB-like helicase C terminal domain BBF96_13150 PF00772 DnaB-like helicase N terminal domain BBF96_13165 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_13165 PF05362 Lon protease (S16) C-terminal proteolytic domain BBF96_13170 PF03948 Ribosomal protein L9, C-terminal domain BBF96_13170 PF01281 Ribosomal protein L9, N-terminal domain BBF96_13185 PF01084 Ribosomal protein S18 BBF96_13190 PF00436 Single-strand binding protein family BBF96_13195 PF01250 Ribosomal protein S6 BBF96_13205 PF00005 ABC transporter BBF96_13215 PF01926 50S ribosome-binding GTPase BBF96_13215 PF06071 Protein of unknown function (DUF933) BBF96_13220 PF06107 Bacterial protein of unknown function (DUF951) BBF96_13225 PF00924 Mechanosensitive ion channel BBF96_13255 PF04055 Radical SAM superfamily BBF96_13255 PF06463 Molybdenum Cofactor Synthesis C BBF96_13265 PF06866 Protein of unknown function (DUF1256) BBF96_13270 PF03698 Uncharacterised protein family (UPF0180) BBF96_13275 PF00781 Diacylglycerol kinase catalytic domain BBF96_13285 PF01476 LysM domain BBF96_13285 PF08525 Opacity-associated protein A N-terminal motif BBF96_13285 PF01551 Peptidase family M23 BBF96_13300 PF01168 Alanine racemase, N-terminal domain BBF96_13300 PF14031 Putative serine dehydratase domain BBF96_13310 PF02080 TrkA-C domain BBF96_13310 PF02254 TrkA-N domain BBF96_13315 PF00266 Aminotransferase class-V BBF96_13320 PF02195 ParB-like nuclease domain BBF96_13320 PF17762 HTH domain found in ParB protein BBF96_13325 PF13614 AAA domain BBF96_13330 PF17762 HTH domain found in ParB protein BBF96_13330 PF02195 ParB-like nuclease domain BBF96_13335 PF02527 rRNA small subunit methyltransferase G BBF96_13340 PF13932 GidA associated domain BBF96_13340 PF01134 Glucose inhibited division protein A BBF96_13345 PF01926 50S ribosome-binding GTPase BBF96_13345 PF12631 MnmE helical domain BBF96_13345 PF10396 GTP-binding protein TrmE N-terminus BBF96_13350 PF01424 R3H domain BBF96_13350 PF14804 Jag N-terminus BBF96_13355 PF02096 60Kd inner membrane protein BBF96_13360 PF01809 Putative membrane protein insertion efficiency factor BBF96_13365 PF00825 Ribonuclease P BBF96_13370 PF08299 Bacterial dnaA protein helix-turn-helix BBF96_13370 PF00308 Bacterial dnaA protein BBF96_13370 PF11638 DnaA N-terminal domain BBF96_13375 PF02767 DNA polymerase III beta subunit, central domain BBF96_13375 PF00712 DNA polymerase III beta subunit, N-terminal domain BBF96_13375 PF02768 DNA polymerase III beta subunit, C-terminal domain BBF96_13385 PF02463 RecF/RecN/SMC N terminal domain BBF96_13395 PF00204 DNA gyrase B BBF96_13395 PF00986 DNA gyrase B subunit, carboxyl terminus BBF96_13395 PF01751 Toprim domain BBF96_13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_13400 PF00521 DNA gyrase/topoisomerase IV, subunit A BBF96_13400 PF03989 DNA gyrase C-terminal domain, beta-propeller BBF96_13500 PF07690 Major Facilitator Superfamily BBF96_13520 PF00872 Transposase, Mutator family BBF96_13525 PF00872 Transposase, Mutator family BBF96_13535 PF02583 Metal-sensitive transcriptional repressor BBF96_13550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BBF96_13550 PF07992 Pyridine nucleotide-disulphide oxidoreductase BBF96_13555 PF01022 Bacterial regulatory protein, arsR family BBF96_13560 PF01113 Dihydrodipicolinate reductase, N-terminus BBF96_13570 PF00291 Pyridoxal-phosphate dependent enzyme BBF96_13580 PF16552 D-ornithine 4,5-aminomutase alpha-subunit BBF96_13585 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit BBF96_13585 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase BBF96_13585 PF02310 B12 binding domain BBF96_13590 PF13941 MutL protein BBF96_13610 PF13344 Haloacid dehalogenase-like hydrolase BBF96_13615 PF04055 Radical SAM superfamily BBF96_13615 PF12544 Lysine-2,3-aminomutase BBF96_13620 PF13426 PAS domain BBF96_13620 PF02954 Bacterial regulatory protein, Fis family BBF96_13620 PF00158 Sigma-54 interaction domain BBF96_13625 PF01343 Peptidase family S49 BBF96_13635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBF96_13635 PF02403 Seryl-tRNA synthetase N-terminal domain BBF96_13655 PF00149 Calcineurin-like phosphoesterase BBF96_13665 PF00989 PAS fold BBF96_13665 PF00512 His Kinase A (phospho-acceptor) domain BBF96_13665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_13670 PF01520 N-acetylmuramoyl-L-alanine amidase BBF96_13670 PF08239 Bacterial SH3 domain BBF96_13685 PF14437 MafB19-like deaminase BBF96_13695 PF00293 NUDIX domain BBF96_13735 PF00005 ABC transporter BBF96_13740 PF00005 ABC transporter BBF96_13775 PF03060 Nitronate monooxygenase BBF96_13780 PF06803 Protein of unknown function (DUF1232) BBF96_13790 PF01209 ubiE/COQ5 methyltransferase family BBF96_13825 PF03060 Nitronate monooxygenase BBF96_13850 PF03979 Sigma-70 factor, region 1.1 BBF96_13850 PF00140 Sigma-70 factor, region 1.2 BBF96_13850 PF04539 Sigma-70 region 3 BBF96_13850 PF04542 Sigma-70 region 2 BBF96_13850 PF04545 Sigma-70, region 4 BBF96_13880 PF00005 ABC transporter BBF96_13885 PF02001 Protein of unknown function DUF134 BBF96_13905 PF00005 ABC transporter BBF96_13910 PF04055 Radical SAM superfamily BBF96_13910 PF13186 Iron-sulfur cluster-binding domain BBF96_13920 PF00302 Chloramphenicol acetyltransferase BBF96_13925 PF00005 ABC transporter BBF96_13925 PF00664 ABC transporter transmembrane region BBF96_13935 PF12169 DNA polymerase III subunits gamma and tau domain III BBF96_13940 PF02575 YbaB/EbfC DNA-binding family BBF96_13945 PF13662 Toprim domain BBF96_13945 PF02132 RecR protein BBF96_13950 PF02903 Alpha amylase, N-terminal ig-like domain BBF96_13950 PF00128 Alpha amylase, catalytic domain BBF96_13955 PF07690 Major Facilitator Superfamily BBF96_13960 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) BBF96_13965 PF04029 2-phosphosulpholactate phosphatase BBF96_13970 PF04284 Protein of unknown function (DUF441) BBF96_13985 PF03601 Conserved hypothetical protein 698 BBF96_13990 PF02743 Cache domain BBF96_13990 PF00672 HAMP domain BBF96_13990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_14020 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BBF96_14030 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BBF96_14030 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BBF96_14035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BBF96_14050 PF00672 HAMP domain BBF96_14050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_14050 PF17202 Single cache domain 3 BBF96_14055 PF00072 Response regulator receiver domain BBF96_14060 PF00571 CBS domain BBF96_14060 PF00478 IMP dehydrogenase / GMP reductase domain BBF96_14065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BBF96_14065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BBF96_14075 PF06153 Cyclic-di-AMP receptor BBF96_14080 PF12169 DNA polymerase III subunits gamma and tau domain III BBF96_14085 PF04468 PSP1 C-terminal conserved region BBF96_14090 PF06156 Initiation control protein YabA BBF96_14095 PF05175 Methyltransferase small domain BBF96_14100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BBF96_14105 PF18277 AbrB C-terminal domain BBF96_14105 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BBF96_14110 PF08264 Anticodon-binding domain of tRNA BBF96_14110 PF09334 tRNA synthetases class I (M) BBF96_14110 PF01588 Putative tRNA binding domain BBF96_14115 PF00128 Alpha amylase, catalytic domain BBF96_14115 PF00686 Starch binding domain BBF96_14115 PF02806 Alpha amylase, C-terminal all-beta domain BBF96_14115 PF01833 IPT/TIG domain BBF96_14125 PF07690 Major Facilitator Superfamily BBF96_14125 PF00083 Sugar (and other) transporter BBF96_14130 PF01026 TatD related DNase BBF96_14145 PF05384 Sensor protein DegS BBF96_14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_14145 PF07730 Histidine kinase BBF96_14150 PF00072 Response regulator receiver domain BBF96_14150 PF00196 Bacterial regulatory proteins, luxR family BBF96_14155 PF00196 Bacterial regulatory proteins, luxR family BBF96_14155 PF00072 Response regulator receiver domain BBF96_14175 PF00704 Glycosyl hydrolases family 18 BBF96_14185 PF00923 Transaldolase/Fructose-6-phosphate aldolase BBF96_14190 PF00082 Subtilase family BBF96_14195 PF05547 Immune inhibitor A peptidase M6 BBF96_14215 PF00398 Ribosomal RNA adenine dimethylase BBF96_14225 PF05582 YabG peptidase U57 BBF96_14230 PF06257 Biofilm formation stimulator VEG BBF96_14240 PF03576 Peptidase family S58 BBF96_14250 PF00535 Glycosyl transferase family 2 BBF96_14265 PF00486 Transcriptional regulatory protein, C terminal BBF96_14265 PF00072 Response regulator receiver domain BBF96_14270 PF00512 His Kinase A (phospho-acceptor) domain BBF96_14270 PF00989 PAS fold BBF96_14270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_14270 PF16736 Single Cache-like BBF96_14275 PF01171 PP-loop family BBF96_14290 PF00356 Bacterial regulatory proteins, lacI family BBF96_14295 PF01547 Bacterial extracellular solute-binding protein BBF96_14300 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_14305 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_14310 PF03636 Glycosyl hydrolase family 65, N-terminal domain BBF96_14310 PF03633 Glycosyl hydrolase family 65, C-terminal domain BBF96_14310 PF03632 Glycosyl hydrolase family 65 central catalytic domain BBF96_14340 PF13186 Iron-sulfur cluster-binding domain BBF96_14340 PF04055 Radical SAM superfamily BBF96_14345 PF13732 Domain of unknown function (DUF4162) BBF96_14345 PF00005 ABC transporter BBF96_14355 PF01523 Putative modulator of DNA gyrase BBF96_14370 PF12849 PBP superfamily domain BBF96_14375 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_14380 PF00528 Binding-protein-dependent transport system inner membrane component BBF96_14385 PF00005 ABC transporter BBF96_14390 PF01895 PhoU domain BBF96_14395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BBF96_14425 PF03401 Tripartite tricarboxylate transporter family receptor BBF96_14440 PF00701 Dihydrodipicolinate synthetase family BBF96_14445 PF01614 Bacterial transcriptional regulator BBF96_14445 PF09339 IclR helix-turn-helix domain BBF96_14455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BBF96_14455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BBF96_14490 PF00654 Voltage gated chloride channel BBF96_14495 PF01950 Fructose-1,6-bisphosphatase BBF96_14500 PF01336 OB-fold nucleic acid binding domain BBF96_14500 PF00152 tRNA synthetases class II (D, K and N) BBF96_14505 PF00266 Aminotransferase class-V BBF96_14510 PF02926 THUMP domain BBF96_14510 PF02568 Thiamine biosynthesis protein (ThiI) BBF96_14515 PF17202 Single cache domain 3 BBF96_14515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_14515 PF00672 HAMP domain BBF96_14530 PF17202 Single cache domain 3 BBF96_14530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_14530 PF00672 HAMP domain BBF96_14535 PF00672 HAMP domain BBF96_14535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BBF96_14535 PF02743 Cache domain BBF96_14540 PF01476 LysM domain BBF96_14540 PF03734 L,D-transpeptidase catalytic domain BBF96_14545 PF00437 Type II/IV secretion system protein BBF96_14550 PF00437 Type II/IV secretion system protein BBF96_14555 PF00482 Type II secretion system (T2SS), protein F BBF96_14560 PF07963 Prokaryotic N-terminal methylation motif BBF96_14560 PF14245 Type IV pilin PilA BBF96_14650 PF13649 Methyltransferase domain BBF96_14660 PF00291 Pyridoxal-phosphate dependent enzyme BBF96_14680 PF01476 LysM domain BBF96_14685 PF01699 Sodium/calcium exchanger protein BBF96_14695 PF00288 GHMP kinases N terminal domain BBF96_14695 PF08544 GHMP kinases C terminal BBF96_14705 PF00156 Phosphoribosyl transferase domain BBF96_14705 PF09182 Bacterial purine repressor, N-terminal BBF96_14720 PF00005 ABC transporter BBF96_14735 PF00072 Response regulator receiver domain BBF96_14735 PF00486 Transcriptional regulatory protein, C terminal BBF96_14740 PF00512 His Kinase A (phospho-acceptor) domain BBF96_14740 PF00672 HAMP domain BBF96_14740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_14750 PF02403 Seryl-tRNA synthetase N-terminal domain BBF96_14750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BBF96_14815 PF07690 Major Facilitator Superfamily BBF96_14825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BBF96_14825 PF07685 CobB/CobQ-like glutamine amidotransferase domain BBF96_14835 PF03186 CobD/Cbib protein BBF96_14840 PF12557 Cob(I)alamin adenosyltransferase N terminal BBF96_14840 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BBF96_14850 PF13411 MerR HTH family regulatory protein BBF96_14855 PF00120 Glutamine synthetase, catalytic domain BBF96_14855 PF03951 Glutamine synthetase, beta-Grasp domain BBF96_14865 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BBF96_14865 PF02769 AIR synthase related protein, C-terminal domain BBF96_14865 PF00586 AIR synthase related protein, N-terminal domain BBF96_14870 PF04026 SpoVG BBF96_14880 PF00483 Nucleotidyl transferase BBF96_14880 PF00132 Bacterial transferase hexapeptide (six repeats) BBF96_14885 PF14572 Phosphoribosyl synthetase-associated domain BBF96_14885 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BBF96_14890 PF14693 Ribosomal protein TL5, C-terminal domain BBF96_14890 PF01386 Ribosomal L25p family BBF96_14895 PF01195 Peptidyl-tRNA hydrolase BBF96_14905 PF04012 PspA/IM30 family BBF96_14925 PF07885 Ion channel BBF96_14925 PF02254 TrkA-N domain BBF96_14940 PF00271 Helicase conserved C-terminal domain BBF96_14940 PF00270 DEAD/DEAH box helicase BBF96_14940 PF02559 CarD-like/TRCF domain BBF96_14940 PF17757 UvrB interaction domain BBF96_14940 PF03461 TRCF domain BBF96_14945 PF15714 Stage V sporulation protein T C-terminal, transcription factor BBF96_14945 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BBF96_14950 PF14667 Polysaccharide biosynthesis C-terminal domain BBF96_14950 PF01943 Polysaccharide biosynthesis protein BBF96_14955 PF03819 MazG nucleotide pyrophosphohydrolase domain BBF96_14960 PF00082 Subtilase family BBF96_14965 PF00768 D-alanyl-D-alanine carboxypeptidase BBF96_14965 PF07943 Penicillin-binding protein 5, C-terminal domain BBF96_14970 PF08486 Stage II sporulation protein BBF96_15065 PF01032 FecCD transport family BBF96_15070 PF00005 ABC transporter BBF96_15075 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BBF96_15085 PF09107 Elongation factor SelB, winged helix BBF96_15085 PF09106 Elongation factor SelB, winged helix BBF96_15085 PF03144 Elongation factor Tu domain 2 BBF96_15085 PF09105 Elongation factor SelB, winged helix BBF96_15085 PF00009 Elongation factor Tu GTP binding domain BBF96_15090 PF02625 XdhC and CoxI family BBF96_15090 PF13478 XdhC Rossmann domain BBF96_15105 PF12804 MobA-like NTP transferase domain BBF96_15110 PF13478 XdhC Rossmann domain BBF96_15110 PF02625 XdhC and CoxI family BBF96_15115 PF00994 Probable molybdopterin binding domain BBF96_15115 PF02464 Competence-damaged protein BBF96_15120 PF17210 SdrD B-like domain BBF96_15120 PF00746 LPXTG cell wall anchor motif BBF96_15120 PF17961 Bacterial Ig domain BBF96_15120 PF04650 YSIRK type signal peptide BBF96_15135 PF00696 Amino acid kinase family BBF96_15140 PF00356 Bacterial regulatory proteins, lacI family BBF96_15145 PF03459 TOBE domain BBF96_15145 PF00005 ABC transporter BBF96_15145 PF17912 MalK OB fold domain BBF96_15160 PF08448 PAS fold BBF96_15160 PF00990 Diguanylate cyclase, GGDEF domain BBF96_15185 PF16921 Tex protein YqgF-like domain BBF96_15185 PF09371 Tex-like protein N-terminal domain BBF96_15185 PF17674 HHH domain BBF96_15185 PF00575 S1 RNA binding domain BBF96_15200 PF00005 ABC transporter BBF96_15205 PF07228 Stage II sporulation protein E (SpoIIE) BBF96_15210 PF01171 PP-loop family BBF96_15210 PF11734 TilS substrate C-terminal domain BBF96_15220 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_15220 PF06480 FtsH Extracellular BBF96_15220 PF01434 Peptidase family M41 BBF96_15220 PF17862 AAA+ lid domain BBF96_15230 PF00221 Aromatic amino acid lyase BBF96_15235 PF17392 Urocanase C-terminal domain BBF96_15235 PF01175 Urocanase Rossmann-like domain BBF96_15235 PF17391 Urocanase N-terminal domain BBF96_15240 PF02971 Formiminotransferase domain BBF96_15240 PF07837 Formiminotransferase domain, N-terminal subdomain BBF96_15245 PF01979 Amidohydrolase family BBF96_15250 PF04961 Formiminotransferase-cyclodeaminase BBF96_15255 PF01268 Formate--tetrahydrofolate ligase BBF96_15260 PF01894 Uncharacterised protein family UPF0047 BBF96_15270 PF14034 Sporulation protein YtrH BBF96_15275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BBF96_15275 PF14579 Helix-hairpin-helix motif BBF96_15275 PF07733 Bacterial DNA polymerase III alpha NTPase domain BBF96_15275 PF02811 PHP domain BBF96_15275 PF01336 OB-fold nucleic acid binding domain BBF96_15280 PF04608 Phosphatidylglycerophosphatase A BBF96_15285 PF10415 Fumarase C C-terminus BBF96_15285 PF00206 Lyase BBF96_15295 PF02081 Tryptophan RNA-binding attenuator protein BBF96_15305 PF01039 Carboxyl transferase domain BBF96_15305 PF17848 Acetyl-coA carboxylase zinc finger domain BBF96_15310 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BBF96_15315 PF00365 Phosphofructokinase BBF96_15320 PF02887 Pyruvate kinase, alpha/beta domain BBF96_15320 PF00224 Pyruvate kinase, barrel domain BBF96_15320 PF00391 PEP-utilising enzyme, mobile domain BBF96_15325 PF04186 FxsA cytoplasmic membrane protein BBF96_15340 PF08141 Small acid-soluble spore protein H family BBF96_15345 PF10145 Phage-related minor tail protein BBF96_15345 PF01551 Peptidase family M23 BBF96_15345 PF01464 Transglycosylase SLT domain BBF96_15350 PF01022 Bacterial regulatory protein, arsR family BBF96_15355 PF02954 Bacterial regulatory protein, Fis family BBF96_15355 PF00989 PAS fold BBF96_15355 PF00158 Sigma-54 interaction domain BBF96_15360 PF13237 4Fe-4S dicluster domain BBF96_15360 PF13375 RnfC Barrel sandwich hybrid domain BBF96_15360 PF10531 SLBB domain BBF96_15360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BBF96_15365 PF09338 Glycine/sarcosine/betaine reductase component B subunits BBF96_15375 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) BBF96_15380 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) BBF96_15385 PF09338 Glycine/sarcosine/betaine reductase component B subunits BBF96_15390 PF09338 Glycine/sarcosine/betaine reductase component B subunits BBF96_15395 PF05544 Proline racemase BBF96_15415 PF00133 tRNA synthetases class I (I, L, M and V) BBF96_15415 PF08264 Anticodon-binding domain of tRNA BBF96_15425 PF00465 Iron-containing alcohol dehydrogenase BBF96_15430 PF00005 ABC transporter BBF96_15445 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BBF96_15455 PF00300 Histidine phosphatase superfamily (branch 1) BBF96_15460 PF02277 Phosphoribosyltransferase BBF96_15470 PF00072 Response regulator receiver domain BBF96_15470 PF00486 Transcriptional regulatory protein, C terminal BBF96_15475 PF00989 PAS fold BBF96_15475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BBF96_15475 PF18698 Histidine kinase sensor domain BBF96_15475 PF00512 His Kinase A (phospho-acceptor) domain BBF96_15475 PF00672 HAMP domain BBF96_15480 PF03448 MgtE intracellular N domain BBF96_15480 PF00571 CBS domain BBF96_15480 PF01769 Divalent cation transporter BBF96_15490 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BBF96_15490 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BBF96_15510 PF02548 Ketopantoate hydroxymethyltransferase BBF96_15515 PF02569 Pantoate-beta-alanine ligase BBF96_15520 PF02261 Aspartate decarboxylase BBF96_15525 PF02445 Quinolinate synthetase A protein BBF96_15530 PF02910 Fumarate reductase flavoprotein C-term BBF96_15530 PF00890 FAD binding domain BBF96_15535 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BBF96_15535 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BBF96_15580 PF08279 HTH domain BBF96_15580 PF03099 Biotin/lipoate A/B protein ligase family BBF96_15580 PF02237 Biotin protein ligase C terminal domain BBF96_15585 PF02632 BioY family BBF96_15590 PF03309 Type III pantothenate kinase BBF96_15595 PF01207 Dihydrouridine synthase (Dus) BBF96_15605 PF08245 Mur ligase middle domain BBF96_15605 PF01225 Mur ligase family, catalytic domain BBF96_15605 PF02875 Mur ligase family, glutamate ligase domain BBF96_15620 PF00202 Aminotransferase class-III BBF96_15630 PF00152 tRNA synthetases class II (D, K and N) BBF96_15630 PF01336 OB-fold nucleic acid binding domain BBF96_15655 PF00005 ABC transporter BBF96_15680 PF17727 CtsR C-terminal dimerization domain BBF96_15680 PF05848 CtsR N-terminal HTH domain BBF96_15685 PF02151 UvrB/uvrC motif BBF96_15690 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BBF96_15695 PF02861 Clp amino terminal domain, pathogenicity island component BBF96_15695 PF10431 C-terminal, D2-small domain, of ClpB protein BBF96_15695 PF00004 ATPase family associated with various cellular activities (AAA) BBF96_15695 PF17871 AAA lid domain BBF96_15695 PF07724 AAA domain (Cdc48 subfamily) BBF96_15700 PF18073 Rubredoxin metal binding domain BBF96_15705 PF12826 Helix-hairpin-helix motif BBF96_15705 PF02457 DisA bacterial checkpoint controller nucleotide-binding BBF96_15705 PF10635 DisA bacterial checkpoint controller linker region BBF96_15715 PF02559 CarD-like/TRCF domain BBF96_15725 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BBF96_15730 PF02542 YgbB family BBF96_15735 PF00478 IMP dehydrogenase / GMP reductase domain BBF96_15735 PF00571 CBS domain BBF96_15745 PF03553 Na+/H+ antiporter family BBF96_15755 PF06207 Protein of unknown function (DUF1002) BBF96_15760 PF00132 Bacterial transferase hexapeptide (six repeats) BBF96_15765 PF00636 Ribonuclease III domain BBF96_15770 PF02511 Thymidylate synthase complementing protein BBF96_15775 PF08032 RNA 2'-O ribose methyltransferase substrate binding BBF96_15775 PF00588 SpoU rRNA Methylase family BBF96_15780 PF08281 Sigma-70, region 4 BBF96_15780 PF04542 Sigma-70 region 2 BBF96_15785 PF03143 Elongation factor Tu C-terminal domain BBF96_15785 PF00009 Elongation factor Tu GTP binding domain BBF96_15785 PF03144 Elongation factor Tu domain 2 BBF96_15790 PF05175 Methyltransferase small domain BBF96_15795 PF00471 Ribosomal protein L33 BBF96_15800 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BBF96_15805 PF02357 Transcription termination factor nusG BBF96_15805 PF00467 KOW motif BBF96_15810 PF00298 Ribosomal protein L11, RNA binding domain BBF96_15810 PF03946 Ribosomal protein L11, N-terminal domain BBF96_15815 PF00687 Ribosomal protein L1p/L10e family BBF96_15820 PF00466 Ribosomal protein L10 BBF96_15835 PF04998 RNA polymerase Rpb1, domain 5 BBF96_15835 PF00623 RNA polymerase Rpb1, domain 2 BBF96_15835 PF04997 RNA polymerase Rpb1, domain 1 BBF96_15835 PF05000 RNA polymerase Rpb1, domain 4 BBF96_15835 PF04983 RNA polymerase Rpb1, domain 3 BBF96_15840 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BBF96_15845 PF00164 Ribosomal protein S12/S23 BBF96_15850 PF00177 Ribosomal protein S7p/S5e BBF96_15855 PF14492 Elongation Factor G, domain II BBF96_15855 PF03764 Elongation factor G, domain IV BBF96_15855 PF03144 Elongation factor Tu domain 2 BBF96_15855 PF00679 Elongation factor G C-terminus BBF96_15855 PF00009 Elongation factor Tu GTP binding domain BBF96_15860 PF00009 Elongation factor Tu GTP binding domain BBF96_15860 PF03143 Elongation factor Tu C-terminal domain BBF96_15860 PF03144 Elongation factor Tu domain 2 BBF96_15865 PF00338 Ribosomal protein S10p/S20e BBF96_15870 PF00297 Ribosomal protein L3 BBF96_15875 PF00573 Ribosomal protein L4/L1 family BBF96_15880 PF00276 Ribosomal protein L23 BBF96_15885 PF00181 Ribosomal Proteins L2, RNA binding domain BBF96_15885 PF03947 Ribosomal Proteins L2, C-terminal domain BBF96_15890 PF00203 Ribosomal protein S19 BBF96_15895 PF00237 Ribosomal protein L22p/L17e BBF96_15900 PF00189 Ribosomal protein S3, C-terminal domain BBF96_15900 PF07650 KH domain BBF96_15905 PF00252 Ribosomal protein L16p/L10e BBF96_15910 PF00831 Ribosomal L29 protein BBF96_15915 PF00366 Ribosomal protein S17 BBF96_15920 PF00238 Ribosomal protein L14p/L23e BBF96_15925 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BBF96_15925 PF00467 KOW motif BBF96_15930 PF00281 Ribosomal protein L5 BBF96_15930 PF00673 ribosomal L5P family C-terminus BBF96_15935 PF00253 Ribosomal protein S14p/S29e BBF96_15940 PF00410 Ribosomal protein S8 BBF96_15945 PF00347 Ribosomal protein L6 BBF96_15950 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BBF96_15955 PF03719 Ribosomal protein S5, C-terminal domain BBF96_15955 PF00333 Ribosomal protein S5, N-terminal domain BBF96_15960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BBF96_15965 PF00344 SecY translocase BBF96_15970 PF05191 Adenylate kinase, active site lid BBF96_15975 PF00557 Metallopeptidase family M24 BBF96_15985 PF01176 Translation initiation factor 1A / IF-1 BBF96_15990 PF00444 Ribosomal protein L36 BBF96_15995 PF00416 Ribosomal protein S13/S18 BBF96_16000 PF00411 Ribosomal protein S11 BBF96_16005 PF00163 Ribosomal protein S4/S9 N-terminal domain BBF96_16005 PF01479 S4 domain BBF96_16010 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BBF96_16010 PF01000 RNA polymerase Rpb3/RpoA insert domain BBF96_16010 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BBF96_16015 PF01196 Ribosomal protein L17 BBF96_16020 PF00005 ABC transporter BBF96_16025 PF00005 ABC transporter BBF96_16030 PF02361 Cobalt transport protein BBF96_16040 PF00572 Ribosomal protein L13 BBF96_16045 PF00380 Ribosomal protein S9/S16