locus-tag class description FK178_00020 PF00834 Ribulose-phosphate 3 epimerase family FK178_00040 PF03979 Sigma-70 factor, region 1.1 FK178_00040 PF00140 Sigma-70 factor, region 1.2 FK178_00040 PF04542 Sigma-70 region 2 FK178_00040 PF04539 Sigma-70 region 3 FK178_00040 PF04545 Sigma-70, region 4 FK178_00045 PF00013 KH domain FK178_00045 PF01138 3' exoribonuclease family, domain 1 FK178_00045 PF00575 S1 RNA binding domain FK178_00045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FK178_00045 PF03725 3' exoribonuclease family, domain 2 FK178_00050 PF00312 Ribosomal protein S15 FK178_00055 PF01039 Carboxyl transferase domain FK178_00060 PF01116 Fructose-bisphosphate aldolase class-II FK178_00080 PF01209 ubiE/COQ5 methyltransferase family FK178_00085 PF02080 TrkA-C domain FK178_00085 PF02254 TrkA-N domain FK178_00090 PF02386 Cation transport protein FK178_00095 PF00912 Transglycosylase FK178_00095 PF00905 Penicillin binding protein transpeptidase domain FK178_00095 PF17092 Penicillin-binding protein OB-like domain FK178_00100 PF00155 Aminotransferase class I and II FK178_00105 PF00487 Fatty acid desaturase FK178_00115 PF05974 Domain of unknown function (DUF892) FK178_00120 PF00355 Rieske [2Fe-2S] domain FK178_00120 PF01266 FAD dependent oxidoreductase FK178_00135 PF14850 DNA-binding domain of Proline dehydrogenase FK178_00135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FK178_00135 PF00171 Aldehyde dehydrogenase family FK178_00135 PF01619 Proline dehydrogenase FK178_00145 PF04379 ApaG domain FK178_00160 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FK178_00160 PF11973 NQRA C-terminal domain FK178_00165 PF03116 NQR2, RnfD, RnfE family FK178_00170 PF04205 FMN-binding domain FK178_00175 PF02508 Rnf-Nqr subunit, membrane protein FK178_00180 PF02508 Rnf-Nqr subunit, membrane protein FK178_00185 PF00970 Oxidoreductase FAD-binding domain FK178_00185 PF00111 2Fe-2S iron-sulfur cluster binding domain FK178_00185 PF00175 Oxidoreductase NAD-binding domain FK178_00195 PF02424 ApbE family FK178_00200 PF08241 Methyltransferase domain FK178_00210 PF00557 Metallopeptidase family M24 FK178_00225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FK178_00225 PF01676 Metalloenzyme superfamily FK178_00255 PF00574 Clp protease FK178_00260 PF00583 Acetyltransferase (GNAT) family FK178_00275 PF04960 Glutaminase FK178_00280 PF03575 Peptidase family S51 FK178_00305 PF02416 mttA/Hcf106 family FK178_00310 PF01596 O-methyltransferase FK178_00315 PF00266 Aminotransferase class-V FK178_00345 PF01494 FAD binding domain FK178_00350 PF03471 Transporter associated domain FK178_00350 PF00999 Sodium/hydrogen exchanger family FK178_00350 PF02080 TrkA-C domain FK178_00355 PF01625 Peptide methionine sulfoxide reductase FK178_00370 PF01784 NIF3 (NGG1p interacting factor 3) FK178_00375 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FK178_00380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_00380 PF01627 Hpt domain FK178_00380 PF17149 Periplasmic sensor domain found in signal transduction proteins FK178_00380 PF00072 Response regulator receiver domain FK178_00380 PF00512 His Kinase A (phospho-acceptor) domain FK178_00380 PF00672 HAMP domain FK178_00385 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FK178_00385 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FK178_00400 PF00535 Glycosyl transferase family 2 FK178_00410 PF02469 Fasciclin domain FK178_00415 PF01565 FAD binding domain FK178_00415 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FK178_00420 PF00155 Aminotransferase class I and II FK178_00435 PF08264 Anticodon-binding domain of tRNA FK178_00435 PF10458 Valyl tRNA synthetase tRNA binding arm FK178_00435 PF00133 tRNA synthetases class I (I, L, M and V) FK178_00445 PF02666 Phosphatidylserine decarboxylase FK178_00460 PF00004 ATPase family associated with various cellular activities (AAA) FK178_00460 PF01434 Peptidase family M41 FK178_00460 PF17862 AAA+ lid domain FK178_00470 PF03099 Biotin/lipoate A/B protein ligase family FK178_00470 PF02237 Biotin protein ligase C terminal domain FK178_00480 PF00156 Phosphoribosyl transferase domain FK178_00485 PF00293 NUDIX domain FK178_00495 PF07715 TonB-dependent Receptor Plug Domain FK178_00495 PF00593 TonB dependent receptor FK178_00500 PF01467 Cytidylyltransferase-like FK178_00505 PF01820 D-ala D-ala ligase N-terminus FK178_00505 PF07478 D-ala D-ala ligase C-terminus FK178_00515 PF00849 RNA pseudouridylate synthase FK178_00515 PF01479 S4 domain FK178_00520 PF03883 Peroxide stress protein YaaA FK178_00540 PF00290 Tryptophan synthase alpha chain FK178_00545 PF00291 Pyridoxal-phosphate dependent enzyme FK178_00550 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FK178_00555 PF00218 Indole-3-glycerol phosphate synthase FK178_00560 PF02885 Glycosyl transferase family, helical bundle domain FK178_00560 PF00591 Glycosyl transferase family, a/b domain FK178_00565 PF00591 Glycosyl transferase family, a/b domain FK178_00565 PF02885 Glycosyl transferase family, helical bundle domain FK178_00565 PF00117 Glutamine amidotransferase class-I FK178_00570 PF04715 Anthranilate synthase component I, N terminal region FK178_00570 PF00425 chorismate binding enzyme FK178_00585 PF00581 Rhodanese-like domain FK178_00590 PF04151 Bacterial pre-peptidase C-terminal domain FK178_00590 PF00082 Subtilase family FK178_00590 PF05922 Peptidase inhibitor I9 FK178_00605 PF07687 Peptidase dimerisation domain FK178_00605 PF01546 Peptidase family M20/M25/M40 FK178_00610 PF01180 Dihydroorotate dehydrogenase FK178_00615 PF01810 LysE type translocator FK178_00620 PF00682 HMGL-like FK178_00630 PF13416 Bacterial extracellular solute-binding protein FK178_00635 PF00528 Binding-protein-dependent transport system inner membrane component FK178_00640 PF00005 ABC transporter FK178_00645 PF00571 CBS domain FK178_00645 PF00478 IMP dehydrogenase / GMP reductase domain FK178_00670 PF00639 PPIC-type PPIASE domain FK178_00670 PF09312 SurA N-terminal domain FK178_00675 PF17863 AAA lid domain FK178_00675 PF07726 ATPase family associated with various cellular activities (AAA) FK178_00680 PF00694 Aconitase C-terminal domain FK178_00680 PF00330 Aconitase family (aconitate hydratase) FK178_00685 PF00578 AhpC/TSA family FK178_00695 PF04116 Fatty acid hydroxylase superfamily FK178_00730 PF01202 Shikimate kinase FK178_00735 PF00156 Phosphoribosyl transferase domain FK178_00745 PF01479 S4 domain FK178_00760 PF02780 Transketolase, C-terminal domain FK178_00760 PF02779 Transketolase, pyrimidine binding domain FK178_00770 PF01702 Queuine tRNA-ribosyltransferase FK178_00785 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FK178_00790 PF03796 DnaB-like helicase C terminal domain FK178_00790 PF00772 DnaB-like helicase N terminal domain FK178_00800 PF01894 Uncharacterised protein family UPF0047 FK178_00805 PF00453 Ribosomal protein L20 FK178_00810 PF01632 Ribosomal protein L35 FK178_00815 PF05198 Translation initiation factor IF-3, N-terminal domain FK178_00815 PF00707 Translation initiation factor IF-3, C-terminal domain FK178_00820 PF02824 TGS domain FK178_00820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FK178_00820 PF03129 Anticodon binding domain FK178_00820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FK178_00865 PF03971 Monomeric isocitrate dehydrogenase FK178_00870 PF00082 Subtilase family FK178_00875 PF01245 Ribosomal protein L19 FK178_00880 PF01746 tRNA (Guanine-1)-methyltransferase FK178_00895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FK178_00895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FK178_00900 PF13180 PDZ domain FK178_00900 PF17820 PDZ domain FK178_00905 PF01678 Diaminopimelate epimerase FK178_00915 PF02618 YceG-like family FK178_00925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FK178_00930 PF01451 Low molecular weight phosphotyrosine protein phosphatase FK178_00935 PF00308 Bacterial dnaA protein FK178_00935 PF08299 Bacterial dnaA protein helix-turn-helix FK178_00935 PF11638 DnaA N-terminal domain FK178_00940 PF03061 Thioesterase superfamily FK178_00945 PF01205 Uncharacterized protein family UPF0029 FK178_00945 PF09186 Domain of unknown function (DUF1949) FK178_00955 PF13419 Haloacid dehalogenase-like hydrolase FK178_00960 PF01872 RibD C-terminal domain FK178_00960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FK178_00965 PF00583 Acetyltransferase (GNAT) family FK178_00970 PF05175 Methyltransferase small domain FK178_00970 PF17827 PrmC N-terminal domain FK178_00975 PF03641 Possible lysine decarboxylase FK178_00985 PF12826 Helix-hairpin-helix motif FK178_00985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FK178_00985 PF01653 NAD-dependent DNA ligase adenylation domain FK178_00985 PF00533 BRCA1 C Terminus (BRCT) domain FK178_00985 PF03120 NAD-dependent DNA ligase OB-fold domain FK178_00990 PF02872 5'-nucleotidase, C-terminal domain FK178_00990 PF00149 Calcineurin-like phosphoesterase FK178_00995 PF00149 Calcineurin-like phosphoesterase FK178_00995 PF00746 LPXTG cell wall anchor motif FK178_00995 PF02872 5'-nucleotidase, C-terminal domain FK178_00995 PF00565 Staphylococcal nuclease homologue FK178_01010 PF00701 Dihydrodipicolinate synthetase family FK178_01025 PF02441 Flavoprotein FK178_01025 PF04127 DNA / pantothenate metabolism flavoprotein FK178_01035 PF13476 AAA domain FK178_01045 PF00535 Glycosyl transferase family 2 FK178_01055 PF01121 Dephospho-CoA kinase FK178_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_01060 PF00512 His Kinase A (phospho-acceptor) domain FK178_01065 PF00486 Transcriptional regulatory protein, C terminal FK178_01065 PF00072 Response regulator receiver domain FK178_01080 PF00520 Ion transport protein FK178_01080 PF00027 Cyclic nucleotide-binding domain FK178_01085 PF00929 Exonuclease FK178_01085 PF02811 PHP domain FK178_01085 PF14579 Helix-hairpin-helix motif FK178_01085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FK178_01085 PF07733 Bacterial DNA polymerase III alpha NTPase domain FK178_01090 PF01168 Alanine racemase, N-terminal domain FK178_01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FK178_01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FK178_01105 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FK178_01105 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FK178_01120 PF01668 SmpB protein FK178_01140 PF00561 alpha/beta hydrolase fold FK178_01145 PF00583 Acetyltransferase (GNAT) family FK178_01150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FK178_01155 PF08281 Sigma-70, region 4 FK178_01155 PF04542 Sigma-70 region 2 FK178_01160 PF00581 Rhodanese-like domain FK178_01180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FK178_01185 PF00326 Prolyl oligopeptidase family FK178_01200 PF01268 Formate--tetrahydrofolate ligase FK178_01210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FK178_01210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FK178_01220 PF00549 CoA-ligase FK178_01220 PF08442 ATP-grasp domain FK178_01230 PF00474 Sodium:solute symporter family FK178_01235 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FK178_01235 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FK178_01240 PF08544 GHMP kinases C terminal FK178_01240 PF00288 GHMP kinases N terminal domain FK178_01240 PF10509 Galactokinase galactose-binding signature FK178_01250 PF00703 Glycosyl hydrolases family 2 FK178_01250 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FK178_01250 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FK178_01250 PF02837 Glycosyl hydrolases family 2, sugar binding domain FK178_01260 PF00128 Alpha amylase, catalytic domain FK178_01260 PF09154 Domain of unknown function (DUF1939) FK178_01270 PF14322 Starch-binding associating with outer membrane FK178_01270 PF07980 SusD family FK178_01275 PF07715 TonB-dependent Receptor Plug Domain FK178_01275 PF00593 TonB dependent receptor FK178_01280 PF00356 Bacterial regulatory proteins, lacI family FK178_01290 PF13419 Haloacid dehalogenase-like hydrolase FK178_01295 PF03636 Glycosyl hydrolase family 65, N-terminal domain FK178_01295 PF03632 Glycosyl hydrolase family 65 central catalytic domain FK178_01295 PF03633 Glycosyl hydrolase family 65, C-terminal domain FK178_01300 PF09087 Cyclomaltodextrinase, N-terminal FK178_01300 PF00128 Alpha amylase, catalytic domain FK178_01300 PF10438 Cyclo-malto-dextrinase C-terminal domain FK178_01305 PF13802 Galactose mutarotase-like FK178_01305 PF17137 Domain of unknown function (DUF5110) FK178_01305 PF01055 Glycosyl hydrolases family 31 FK178_01305 PF16338 Domain of unknown function (DUF4968) FK178_01310 PF00128 Alpha amylase, catalytic domain FK178_01315 PF11941 Domain of unknown function (DUF3459) FK178_01315 PF00128 Alpha amylase, catalytic domain FK178_01320 PF00365 Phosphofructokinase FK178_01325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FK178_01325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FK178_01335 PF01078 Magnesium chelatase, subunit ChlI FK178_01335 PF13335 Magnesium chelatase, subunit ChlI C-terminal FK178_01345 PF01566 Natural resistance-associated macrophage protein FK178_01350 PF03746 LamB/YcsF family FK178_01355 PF02682 Carboxyltransferase domain, subdomain C and D FK178_01380 PF00672 HAMP domain FK178_01380 PF00512 His Kinase A (phospho-acceptor) domain FK178_01385 PF00196 Bacterial regulatory proteins, luxR family FK178_01385 PF00072 Response regulator receiver domain FK178_01390 PF00795 Carbon-nitrogen hydrolase FK178_01390 PF00583 Acetyltransferase (GNAT) family FK178_01400 PF00764 Arginosuccinate synthase FK178_01405 PF02774 Semialdehyde dehydrogenase, dimerisation domain FK178_01405 PF01118 Semialdehyde dehydrogenase, NAD binding domain FK178_01410 PF00202 Aminotransferase class-III FK178_01415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FK178_01415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FK178_01420 PF00696 Amino acid kinase family FK178_01425 PF01546 Peptidase family M20/M25/M40 FK178_01425 PF07687 Peptidase dimerisation domain FK178_01430 PF00206 Lyase FK178_01435 PF00920 Dehydratase family FK178_01440 PF00205 Thiamine pyrophosphate enzyme, central domain FK178_01440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FK178_01440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FK178_01450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FK178_01450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FK178_01460 PF00180 Isocitrate/isopropylmalate dehydrogenase FK178_01465 PF00694 Aconitase C-terminal domain FK178_01470 PF00330 Aconitase family (aconitate hydratase) FK178_01475 PF00682 HMGL-like FK178_01475 PF08502 LeuA allosteric (dimerisation) domain FK178_01485 PF01554 MatE FK178_01490 PF01479 S4 domain FK178_01490 PF00849 RNA pseudouridylate synthase FK178_01495 PF02548 Ketopantoate hydroxymethyltransferase FK178_01515 PF00012 Hsp70 protein FK178_01530 PF03061 Thioesterase superfamily FK178_01545 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FK178_01545 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FK178_01545 PF16582 Middle domain of thiamine pyrophosphate FK178_01555 PF17783 CvfB-like winged helix domain FK178_01555 PF13509 S1 domain FK178_01580 PF02779 Transketolase, pyrimidine binding domain FK178_01580 PF02780 Transketolase, C-terminal domain FK178_01590 PF03641 Possible lysine decarboxylase FK178_01595 PF00005 ABC transporter FK178_01595 PF17760 UvrA interaction domain FK178_01595 PF17755 UvrA DNA-binding domain FK178_01615 PF14200 Ricin-type beta-trefoil lectin domain-like FK178_01615 PF01400 Astacin (Peptidase family M12A) FK178_01620 PF04336 Acyl carrier protein phosphodiesterase FK178_01625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FK178_01625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FK178_01625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FK178_01625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FK178_01645 PF08534 Redoxin FK178_01665 PF05552 Conserved TM helix FK178_01665 PF00924 Mechanosensitive ion channel FK178_01670 PF00210 Ferritin-like domain FK178_01680 PF00852 Glycosyltransferase family 10 (fucosyltransferase) C-term FK178_01680 PF18025 Alpha-(1,3)-fucosyltransferase FucT N-terminal domain FK178_01685 PF16363 GDP-mannose 4,6 dehydratase FK178_01700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FK178_01705 PF00483 Nucleotidyl transferase FK178_01710 PF01370 NAD dependent epimerase/dehydratase family FK178_01720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FK178_01720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FK178_01720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FK178_01725 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FK178_01725 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FK178_01725 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FK178_01730 PF01370 NAD dependent epimerase/dehydratase family FK178_01735 PF01943 Polysaccharide biosynthesis protein FK178_01740 PF02719 Polysaccharide biosynthesis protein FK178_01745 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FK178_01760 PF02348 Cytidylyltransferase FK178_01775 PF03102 NeuB family FK178_01775 PF08666 SAF domain FK178_01785 PF13439 Glycosyltransferase Family 4 FK178_01785 PF00534 Glycosyl transferases group 1 FK178_01795 PF00535 Glycosyl transferase family 2 FK178_01800 PF01522 Polysaccharide deacetylase FK178_01820 PF13439 Glycosyltransferase Family 4 FK178_01820 PF00534 Glycosyl transferases group 1 FK178_01840 PF13537 Glutamine amidotransferase domain FK178_01840 PF00733 Asparagine synthase FK178_01845 PF00535 Glycosyl transferase family 2 FK178_01850 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FK178_01850 PF00535 Glycosyl transferase family 2 FK178_01855 PF17836 PglD N-terminal domain FK178_01855 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_01875 PF00534 Glycosyl transferases group 1 FK178_01875 PF13477 Glycosyl transferase 4-like FK178_01880 PF02397 Bacterial sugar transferase FK178_01885 PF17836 PglD N-terminal domain FK178_01885 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_01890 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FK178_01895 PF02719 Polysaccharide biosynthesis protein FK178_01905 PF02706 Chain length determinant protein FK178_01905 PF13807 G-rich domain on putative tyrosine kinase FK178_01905 PF13614 AAA domain FK178_01920 PF00360 Phytochrome region FK178_01920 PF08446 PAS fold FK178_01920 PF00512 His Kinase A (phospho-acceptor) domain FK178_01920 PF01590 GAF domain FK178_01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_01925 PF00072 Response regulator receiver domain FK178_01935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_01935 PF01627 Hpt domain FK178_01935 PF00072 Response regulator receiver domain FK178_01935 PF01584 CheW-like domain FK178_01935 PF02895 Signal transducing histidine kinase, homodimeric domain FK178_01965 PF03109 ABC1 family FK178_01985 PF00999 Sodium/hydrogen exchanger family FK178_01985 PF02254 TrkA-N domain FK178_02000 PF00171 Aldehyde dehydrogenase family FK178_02005 PF00696 Amino acid kinase family FK178_02005 PF01472 PUA domain FK178_02010 PF03807 NADP oxidoreductase coenzyme F420-dependent FK178_02010 PF14748 Pyrroline-5-carboxylate reductase dimerisation FK178_02035 PF01432 Peptidase family M3 FK178_02040 PF08448 PAS fold FK178_02040 PF03705 CheR methyltransferase, all-alpha domain FK178_02040 PF01739 CheR methyltransferase, SAM binding domain FK178_02040 PF01339 CheB methylesterase FK178_02045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_02045 PF01590 GAF domain FK178_02045 PF00512 His Kinase A (phospho-acceptor) domain FK178_02045 PF00360 Phytochrome region FK178_02045 PF08446 PAS fold FK178_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_02065 PF08447 PAS fold FK178_02065 PF00989 PAS fold FK178_02065 PF00512 His Kinase A (phospho-acceptor) domain FK178_02070 PF00849 RNA pseudouridylate synthase FK178_02075 PF00127 Copper binding proteins, plastocyanin/azurin family FK178_02080 PF03099 Biotin/lipoate A/B protein ligase family FK178_02080 PF10437 Bacterial lipoate protein ligase C-terminus FK178_02090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FK178_02090 PF00753 Metallo-beta-lactamase superfamily FK178_02090 PF10996 Beta-Casp domain FK178_02130 PF00689 Cation transporting ATPase, C-terminus FK178_02130 PF00690 Cation transporter/ATPase, N-terminus FK178_02135 PF03641 Possible lysine decarboxylase FK178_02145 PF00005 ABC transporter FK178_02150 PF02405 Permease MlaE FK178_02175 PF08240 Alcohol dehydrogenase GroES-like domain FK178_02175 PF13823 Alcohol dehydrogenase GroES-associated FK178_02175 PF00107 Zinc-binding dehydrogenase FK178_02200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK178_02200 PF00529 HlyD membrane-fusion protein of T1SS FK178_02205 PF00873 AcrB/AcrD/AcrF family FK178_02215 PF01136 Peptidase family U32 FK178_02245 PF01925 Sulfite exporter TauE/SafE FK178_02250 PF00581 Rhodanese-like domain FK178_02260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FK178_02265 PF02872 5'-nucleotidase, C-terminal domain FK178_02265 PF00149 Calcineurin-like phosphoesterase FK178_02290 PF07690 Major Facilitator Superfamily FK178_02295 PF00753 Metallo-beta-lactamase superfamily FK178_02295 PF00581 Rhodanese-like domain FK178_02330 PF01523 Putative modulator of DNA gyrase FK178_02340 PF17863 AAA lid domain FK178_02340 PF07726 ATPase family associated with various cellular activities (AAA) FK178_02345 PF01882 Protein of unknown function DUF58 FK178_02395 PF00005 ABC transporter FK178_02400 PF13472 GDSL-like Lipase/Acylhydrolase family FK178_02405 PF00535 Glycosyl transferase family 2 FK178_02420 PF00072 Response regulator receiver domain FK178_02420 PF00486 Transcriptional regulatory protein, C terminal FK178_02425 PF09308 LuxQ, periplasmic FK178_02425 PF00512 His Kinase A (phospho-acceptor) domain FK178_02425 PF00072 Response regulator receiver domain FK178_02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_02430 PF14492 Elongation Factor G, domain II FK178_02430 PF03144 Elongation factor Tu domain 2 FK178_02430 PF00009 Elongation factor Tu GTP binding domain FK178_02430 PF00679 Elongation factor G C-terminus FK178_02430 PF03764 Elongation factor G, domain IV FK178_02435 PF03372 Endonuclease/Exonuclease/phosphatase family FK178_02450 PF08501 Shikimate dehydrogenase substrate binding domain FK178_02450 PF01488 Shikimate / quinate 5-dehydrogenase FK178_02455 PF00072 Response regulator receiver domain FK178_02455 PF00486 Transcriptional regulatory protein, C terminal FK178_02460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_02460 PF00512 His Kinase A (phospho-acceptor) domain FK178_02460 PF16736 Single Cache-like FK178_02460 PF00989 PAS fold FK178_02465 PF00027 Cyclic nucleotide-binding domain FK178_02465 PF13545 Crp-like helix-turn-helix domain FK178_02480 PF00005 ABC transporter FK178_02485 PF04228 Putative neutral zinc metallopeptidase FK178_02490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FK178_02490 PF00326 Prolyl oligopeptidase family FK178_02495 PF00144 Beta-lactamase FK178_02505 PF08459 UvrC Helix-hairpin-helix N-terminal FK178_02505 PF02151 UvrB/uvrC motif FK178_02505 PF01541 GIY-YIG catalytic domain FK178_02510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FK178_02510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FK178_02515 PF01758 Sodium Bile acid symporter family FK178_02525 PF13847 Methyltransferase domain FK178_02535 PF02374 Anion-transporting ATPase FK178_02540 PF06953 Arsenical resistance operon trans-acting repressor ArsD FK178_02555 PF00106 short chain dehydrogenase FK178_02560 PF00171 Aldehyde dehydrogenase family FK178_02580 PF02567 Phenazine biosynthesis-like protein FK178_02595 PF01177 Asp/Glu/Hydantoin racemase FK178_02620 PF01381 Helix-turn-helix FK178_02625 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FK178_02625 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FK178_02670 PF01627 Hpt domain FK178_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_02670 PF02895 Signal transducing histidine kinase, homodimeric domain FK178_02670 PF01584 CheW-like domain FK178_02685 PF00403 Heavy-metal-associated domain FK178_02700 PF00535 Glycosyl transferase family 2 FK178_02710 PF02151 UvrB/uvrC motif FK178_02710 PF00271 Helicase conserved C-terminal domain FK178_02710 PF04851 Type III restriction enzyme, res subunit FK178_02710 PF17757 UvrB interaction domain FK178_02710 PF12344 Ultra-violet resistance protein B FK178_02750 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FK178_02795 PF18273 Type III R-M EcoP15I C-terminal domain FK178_02795 PF01555 DNA methylase FK178_02800 PF00176 SNF2 family N-terminal domain FK178_02800 PF00271 Helicase conserved C-terminal domain FK178_02805 PF15935 RNase LS, bacterial toxin FK178_02870 PF00589 Phage integrase family FK178_02870 PF02899 Phage integrase, N-terminal SAM-like domain FK178_02875 PF10396 GTP-binding protein TrmE N-terminus FK178_02875 PF01926 50S ribosome-binding GTPase FK178_02875 PF12631 MnmE helical domain FK178_02910 PF02562 PhoH-like protein FK178_02915 PF01259 SAICAR synthetase FK178_02920 PF13193 AMP-binding enzyme C-terminal domain FK178_02920 PF00501 AMP-binding enzyme FK178_02920 PF16177 Acetyl-coenzyme A synthetase N-terminus FK178_02935 PF07715 TonB-dependent Receptor Plug Domain FK178_02935 PF00593 TonB dependent receptor FK178_02950 PF05343 M42 glutamyl aminopeptidase FK178_03000 PF10672 S-adenosylmethionine-dependent methyltransferase FK178_03000 PF02926 THUMP domain FK178_03000 PF01170 Putative RNA methylase family UPF0020 FK178_03015 PF05958 tRNA (Uracil-5-)-methyltransferase FK178_03015 PF01938 TRAM domain FK178_03020 PF00202 Aminotransferase class-III FK178_03025 PF00588 SpoU rRNA Methylase family FK178_03035 PF07715 TonB-dependent Receptor Plug Domain FK178_03035 PF00593 TonB dependent receptor FK178_03040 PF00271 Helicase conserved C-terminal domain FK178_03040 PF00270 DEAD/DEAH box helicase FK178_03045 PF01725 Ham1 family FK178_03050 PF02590 Predicted SPOUT methyltransferase FK178_03055 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FK178_03055 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FK178_03060 PF03631 Virulence factor BrkB FK178_03075 PF00271 Helicase conserved C-terminal domain FK178_03075 PF17764 3′ DNA-binding domain (3′BD) FK178_03075 PF18074 Primosomal protein N C-terminal domain FK178_03075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FK178_03075 PF04851 Type III restriction enzyme, res subunit FK178_03080 PF00072 Response regulator receiver domain FK178_03080 PF04397 LytTr DNA-binding domain FK178_03085 PF01250 Ribosomal protein S6 FK178_03090 PF01084 Ribosomal protein S18 FK178_03095 PF01281 Ribosomal protein L9, N-terminal domain FK178_03095 PF03948 Ribosomal protein L9, C-terminal domain FK178_03110 PF03129 Anticodon binding domain FK178_03110 PF13393 Histidyl-tRNA synthetase FK178_03145 PF00266 Aminotransferase class-V FK178_03170 PF12072 Domain of unknown function (DUF3552) FK178_03170 PF01966 HD domain FK178_03170 PF00013 KH domain FK178_03175 PF00248 Aldo/keto reductase family FK178_03180 PF02899 Phage integrase, N-terminal SAM-like domain FK178_03180 PF00589 Phage integrase family FK178_03205 PF01220 Dehydroquinase class II FK178_03215 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_03215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK178_03225 PF01641 SelR domain FK178_03230 PF01641 SelR domain FK178_03245 PF11700 Vacuole effluxer Atg22 like FK178_03265 PF08281 Sigma-70, region 4 FK178_03265 PF04542 Sigma-70 region 2 FK178_03270 PF02190 ATP-dependent protease La (LON) substrate-binding domain FK178_03270 PF05362 Lon protease (S16) C-terminal proteolytic domain FK178_03270 PF00004 ATPase family associated with various cellular activities (AAA) FK178_03280 PF02224 Cytidylate kinase FK178_03290 PF00575 S1 RNA binding domain FK178_03295 PF00156 Phosphoribosyl transferase domain FK178_03300 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FK178_03300 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FK178_03310 PF12706 Beta-lactamase superfamily domain FK178_03315 PF00188 Cysteine-rich secretory protein family FK178_03320 PF01389 OmpA-like transmembrane domain FK178_03320 PF00691 OmpA family FK178_03335 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FK178_03335 PF01243 Pyridoxamine 5'-phosphate oxidase FK178_03345 PF13089 Polyphosphate kinase N-terminal domain FK178_03345 PF17941 Polyphosphate kinase C-terminal domain 1 FK178_03345 PF13090 Polyphosphate kinase C-terminal domain 2 FK178_03345 PF02503 Polyphosphate kinase middle domain FK178_03360 PF12169 DNA polymerase III subunits gamma and tau domain III FK178_03395 PF02371 Transposase IS116/IS110/IS902 family FK178_03395 PF01548 Transposase FK178_03435 PF02348 Cytidylyltransferase FK178_03440 PF03441 FAD binding domain of DNA photolyase FK178_03440 PF00875 DNA photolyase FK178_03480 PF02545 Maf-like protein FK178_03490 PF00893 Small Multidrug Resistance protein FK178_03505 PF05140 ResB-like family FK178_03505 PF01578 Cytochrome C assembly protein FK178_03510 PF00206 Lyase FK178_03510 PF10415 Fumarase C C-terminus FK178_03530 PF03960 ArsC family FK178_03545 PF01212 Beta-eliminating lyase FK178_03550 PF02575 YbaB/EbfC DNA-binding family FK178_03555 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FK178_03555 PF00326 Prolyl oligopeptidase family FK178_03560 PF00291 Pyridoxal-phosphate dependent enzyme FK178_03560 PF00571 CBS domain FK178_03565 PF00155 Aminotransferase class I and II FK178_03600 PF00005 ABC transporter FK178_03600 PF17760 UvrA interaction domain FK178_03600 PF17755 UvrA DNA-binding domain FK178_03610 PF00730 HhH-GPD superfamily base excision DNA repair protein FK178_03610 PF10576 Iron-sulfur binding domain of endonuclease III FK178_03610 PF00633 Helix-hairpin-helix motif FK178_03625 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FK178_03625 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FK178_03635 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FK178_03640 PF02954 Bacterial regulatory protein, Fis family FK178_03640 PF00158 Sigma-54 interaction domain FK178_03640 PF00072 Response regulator receiver domain FK178_03645 PF01966 HD domain FK178_03655 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FK178_03655 PF07977 FabA-like domain FK178_03660 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FK178_03660 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_03665 PF08207 Elongation factor P (EF-P) KOW-like domain FK178_03665 PF09285 Elongation factor P, C-terminal FK178_03665 PF01132 Elongation factor P (EF-P) OB domain FK178_03670 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FK178_03670 PF14602 Hexapeptide repeat of succinyl-transferase FK178_03670 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_03680 PF00549 CoA-ligase FK178_03680 PF02629 CoA binding domain FK178_03700 PF08029 HisG, C-terminal domain FK178_03700 PF01634 ATP phosphoribosyltransferase FK178_03705 PF00815 Histidinol dehydrogenase FK178_03710 PF00155 Aminotransferase class I and II FK178_03715 PF00475 Imidazoleglycerol-phosphate dehydratase FK178_03720 PF00117 Glutamine amidotransferase class-I FK178_03725 PF00977 Histidine biosynthesis protein FK178_03730 PF00977 Histidine biosynthesis protein FK178_03735 PF01502 Phosphoribosyl-AMP cyclohydrolase FK178_03735 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FK178_03740 PF03928 Haem-degrading FK178_03745 PF05726 Pirin C-terminal cupin domain FK178_03745 PF02678 Pirin FK178_03775 PF16916 Dimerisation domain of Zinc Transporter FK178_03775 PF01545 Cation efflux family FK178_03780 PF13520 Amino acid permease FK178_03795 PF01594 AI-2E family transporter FK178_03805 PF00199 Catalase FK178_03805 PF06628 Catalase-related immune-responsive FK178_03805 PF18011 C-terminal domain found in long catalases FK178_03810 PF00905 Penicillin binding protein transpeptidase domain FK178_03810 PF17092 Penicillin-binding protein OB-like domain FK178_03810 PF00912 Transglycosylase FK178_03815 PF00486 Transcriptional regulatory protein, C terminal FK178_03815 PF00072 Response regulator receiver domain FK178_03820 PF00512 His Kinase A (phospho-acceptor) domain FK178_03820 PF00672 HAMP domain FK178_03820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_03840 PF01244 Membrane dipeptidase (Peptidase family M19) FK178_03845 PF08443 RimK-like ATP-grasp domain FK178_03845 PF18030 RimK PreATP-grasp domain FK178_03850 PF04107 Glutamate-cysteine ligase family 2(GCS2) FK178_03860 PF02566 OsmC-like protein FK178_03865 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK178_03870 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FK178_03870 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FK178_03885 PF00512 His Kinase A (phospho-acceptor) domain FK178_03885 PF18719 ArlS sensor domain FK178_03885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_03890 PF00486 Transcriptional regulatory protein, C terminal FK178_03890 PF00072 Response regulator receiver domain FK178_03895 PF01569 PAP2 superfamily FK178_03915 PF00696 Amino acid kinase family FK178_03915 PF01842 ACT domain FK178_03930 PF01272 Transcription elongation factor, GreA/GreB, C-term FK178_03930 PF03449 Transcription elongation factor, N-terminal FK178_03935 PF07681 DoxX FK178_03965 PF00582 Universal stress protein family FK178_03985 PF00271 Helicase conserved C-terminal domain FK178_03985 PF00270 DEAD/DEAH box helicase FK178_03985 PF03880 DbpA RNA binding domain FK178_03990 PF09905 DNA-binding protein VF530 FK178_04010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FK178_04015 PF00226 DnaJ domain FK178_04015 PF00684 DnaJ central domain FK178_04015 PF01556 DnaJ C terminal domain FK178_04030 PF00892 EamA-like transporter family FK178_04040 PF13520 Amino acid permease FK178_04070 PF01648 4'-phosphopantetheinyl transferase superfamily FK178_04075 PF00550 Phosphopantetheine attachment site FK178_04080 PF02801 Beta-ketoacyl synthase, C-terminal domain FK178_04080 PF00109 Beta-ketoacyl synthase, N-terminal domain FK178_04085 PF07977 FabA-like domain FK178_04095 PF00195 Chalcone and stilbene synthases, N-terminal domain FK178_04095 PF02797 Chalcone and stilbene synthases, C-terminal domain FK178_04110 PF13488 Glycine zipper FK178_04110 PF00691 OmpA family FK178_04125 PF02779 Transketolase, pyrimidine binding domain FK178_04125 PF02780 Transketolase, C-terminal domain FK178_04145 PF01048 Phosphorylase superfamily FK178_04150 PF17941 Polyphosphate kinase C-terminal domain 1 FK178_04150 PF02503 Polyphosphate kinase middle domain FK178_04150 PF13090 Polyphosphate kinase C-terminal domain 2 FK178_04150 PF13089 Polyphosphate kinase N-terminal domain FK178_04165 PF03167 Uracil DNA glycosylase superfamily FK178_04170 PF01713 Smr domain FK178_04170 PF00488 MutS domain V FK178_04175 PF04134 Protein of unknown function, DUF393 FK178_04180 PF00375 Sodium:dicarboxylate symporter family FK178_04185 PF01264 Chorismate synthase FK178_04200 PF02913 FAD linked oxidases, C-terminal domain FK178_04200 PF01565 FAD binding domain FK178_04200 PF13183 4Fe-4S dicluster domain FK178_04215 PF00933 Glycosyl hydrolase family 3 N terminal domain FK178_04215 PF01915 Glycosyl hydrolase family 3 C-terminal domain FK178_04225 PF02754 Cysteine-rich domain FK178_04225 PF13183 4Fe-4S dicluster domain FK178_04230 PF02665 Nitrate reductase gamma subunit FK178_04230 PF13183 4Fe-4S dicluster domain FK178_04230 PF02754 Cysteine-rich domain FK178_04240 PF01520 N-acetylmuramoyl-L-alanine amidase FK178_04250 PF01042 Endoribonuclease L-PSP FK178_04255 PF02142 MGS-like domain FK178_04260 PF00365 Phosphofructokinase FK178_04270 PF00814 Glycoprotease family FK178_04275 PF04452 RNA methyltransferase FK178_04290 PF01594 AI-2E family transporter FK178_04300 PF13302 Acetyltransferase (GNAT) domain FK178_04310 PF01872 RibD C-terminal domain FK178_04335 PF00535 Glycosyl transferase family 2 FK178_04340 PF07977 FabA-like domain FK178_04350 PF01522 Polysaccharide deacetylase FK178_04360 PF02801 Beta-ketoacyl synthase, C-terminal domain FK178_04360 PF00109 Beta-ketoacyl synthase, N-terminal domain FK178_04365 PF00550 Phosphopantetheine attachment site FK178_04375 PF02801 Beta-ketoacyl synthase, C-terminal domain FK178_04375 PF00109 Beta-ketoacyl synthase, N-terminal domain FK178_04400 PF00221 Aromatic amino acid lyase FK178_04405 PF04820 Tryptophan halogenase FK178_04420 PF00589 Phage integrase family FK178_04420 PF02899 Phage integrase, N-terminal SAM-like domain FK178_04455 PF02685 Glucokinase FK178_04460 PF00011 Hsp20/alpha crystallin family FK178_04465 PF00690 Cation transporter/ATPase, N-terminus FK178_04465 PF00689 Cation transporting ATPase, C-terminus FK178_04470 PF01791 DeoC/LacD family aldolase FK178_04475 PF01048 Phosphorylase superfamily FK178_04495 PF00512 His Kinase A (phospho-acceptor) domain FK178_04495 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FK178_04495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_04495 PF01627 Hpt domain FK178_04495 PF00672 HAMP domain FK178_04495 PF00072 Response regulator receiver domain FK178_04500 PF08448 PAS fold FK178_04500 PF08447 PAS fold FK178_04500 PF00563 EAL domain FK178_04500 PF00990 Diguanylate cyclase, GGDEF domain FK178_04500 PF13426 PAS domain FK178_04500 PF05231 MASE1 FK178_04515 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FK178_04515 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FK178_04535 PF00128 Alpha amylase, catalytic domain FK178_04535 PF16657 Maltogenic Amylase, C-terminal domain FK178_04540 PF00128 Alpha amylase, catalytic domain FK178_04540 PF16657 Maltogenic Amylase, C-terminal domain FK178_04555 PF10282 Lactonase, 7-bladed beta-propeller FK178_04560 PF01544 CorA-like Mg2+ transporter protein FK178_04565 PF09382 RQC domain FK178_04565 PF00270 DEAD/DEAH box helicase FK178_04565 PF00271 Helicase conserved C-terminal domain FK178_04565 PF00570 HRDC domain FK178_04565 PF16124 RecQ zinc-binding FK178_04570 PF01416 tRNA pseudouridine synthase FK178_04575 PF00271 Helicase conserved C-terminal domain FK178_04575 PF04851 Type III restriction enzyme, res subunit FK178_04580 PF00027 Cyclic nucleotide-binding domain FK178_04580 PF13545 Crp-like helix-turn-helix domain FK178_04590 PF00291 Pyridoxal-phosphate dependent enzyme FK178_04595 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_04605 PF12805 FUSC-like inner membrane protein yccS FK178_04610 PF16884 N-terminal domain of oxidoreductase FK178_04610 PF00107 Zinc-binding dehydrogenase FK178_04640 PF00270 DEAD/DEAH box helicase FK178_04640 PF00271 Helicase conserved C-terminal domain FK178_04645 PF01679 Proteolipid membrane potential modulator FK178_04650 PF16363 GDP-mannose 4,6 dehydratase FK178_04655 PF12823 Domain of unknown function (DUF3817) FK178_04660 PF00924 Mechanosensitive ion channel FK178_04680 PF00171 Aldehyde dehydrogenase family FK178_04705 PF07697 7TM-HD extracellular FK178_04705 PF07698 7TM receptor with intracellular HD hydrolase FK178_04705 PF01966 HD domain FK178_04710 PF02803 Thiolase, C-terminal domain FK178_04710 PF00108 Thiolase, N-terminal domain FK178_04715 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain FK178_04715 PF00877 NlpC/P60 family FK178_04725 PF03989 DNA gyrase C-terminal domain, beta-propeller FK178_04725 PF00521 DNA gyrase/topoisomerase IV, subunit A FK178_04730 PF07724 AAA domain (Cdc48 subfamily) FK178_04730 PF02861 Clp amino terminal domain, pathogenicity island component FK178_04730 PF00004 ATPase family associated with various cellular activities (AAA) FK178_04730 PF17871 AAA lid domain FK178_04730 PF10431 C-terminal, D2-small domain, of ClpB protein FK178_04740 PF00221 Aromatic amino acid lyase FK178_04745 PF01256 Carbohydrate kinase FK178_04750 PF01571 Aminomethyltransferase folate-binding domain FK178_04750 PF08669 Glycine cleavage T-protein C-terminal barrel domain FK178_04760 PF01329 Pterin 4 alpha carbinolamine dehydratase FK178_04765 PF01709 Transcriptional regulator FK178_04775 PF01619 Proline dehydrogenase FK178_04780 PF01761 3-dehydroquinate synthase FK178_04790 PF01965 DJ-1/PfpI family FK178_04795 PF03631 Virulence factor BrkB FK178_04825 PF01741 Large-conductance mechanosensitive channel, MscL FK178_04840 PF00986 DNA gyrase B subunit, carboxyl terminus FK178_04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_04840 PF01751 Toprim domain FK178_04840 PF00204 DNA gyrase B FK178_04845 PF01926 50S ribosome-binding GTPase FK178_04845 PF06071 Protein of unknown function (DUF933) FK178_04855 PF07085 DRTGG domain FK178_04855 PF01515 Phosphate acetyl/butaryl transferase FK178_04860 PF00871 Acetokinase family FK178_04865 PF02867 Ribonucleotide reductase, barrel domain FK178_04865 PF03477 ATP cone domain FK178_04865 PF00317 Ribonucleotide reductase, all-alpha domain FK178_04885 PF02446 4-alpha-glucanotransferase FK178_04890 PF00128 Alpha amylase, catalytic domain FK178_04900 PF11941 Domain of unknown function (DUF3459) FK178_04900 PF00128 Alpha amylase, catalytic domain FK178_04905 PF11896 Domain of unknown function (DUF3416) FK178_04905 PF00128 Alpha amylase, catalytic domain FK178_04910 PF00128 Alpha amylase, catalytic domain FK178_04910 PF16657 Maltogenic Amylase, C-terminal domain FK178_04915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FK178_04915 PF02806 Alpha amylase, C-terminal all-beta domain FK178_04915 PF00128 Alpha amylase, catalytic domain FK178_04920 PF00037 4Fe-4S binding domain FK178_04930 PF00266 Aminotransferase class-V FK178_04935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK178_04935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK178_04955 PF00593 TonB dependent receptor FK178_04955 PF07715 TonB-dependent Receptor Plug Domain FK178_04965 PF01227 GTP cyclohydrolase I FK178_04970 PF01625 Peptide methionine sulfoxide reductase FK178_04980 PF00005 ABC transporter FK178_04990 PF17149 Periplasmic sensor domain found in signal transduction proteins FK178_04990 PF00672 HAMP domain FK178_04990 PF00512 His Kinase A (phospho-acceptor) domain FK178_04990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_04990 PF00072 Response regulator receiver domain FK178_04990 PF01627 Hpt domain FK178_04995 PF00672 HAMP domain FK178_04995 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FK178_04995 PF00072 Response regulator receiver domain FK178_04995 PF01627 Hpt domain FK178_04995 PF00512 His Kinase A (phospho-acceptor) domain FK178_04995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_05005 PF01979 Amidohydrolase family FK178_05025 PF00753 Metallo-beta-lactamase superfamily FK178_05035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FK178_05055 PF09382 RQC domain FK178_05055 PF16124 RecQ zinc-binding FK178_05055 PF00570 HRDC domain FK178_05055 PF00271 Helicase conserved C-terminal domain FK178_05055 PF00270 DEAD/DEAH box helicase FK178_05060 PF02911 Formyl transferase, C-terminal domain FK178_05060 PF00551 Formyl transferase FK178_05065 PF00216 Bacterial DNA-binding protein FK178_05070 PF02622 Uncharacterized ACR, COG1678 FK178_05075 PF01063 Amino-transferase class IV FK178_05100 PF01226 Formate/nitrite transporter FK178_05115 PF07715 TonB-dependent Receptor Plug Domain FK178_05115 PF00593 TonB dependent receptor FK178_05125 PF07995 Glucose / Sorbosone dehydrogenase FK178_05135 PF07885 Ion channel FK178_05170 PF14572 Phosphoribosyl synthetase-associated domain FK178_05170 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FK178_05175 PF02885 Glycosyl transferase family, helical bundle domain FK178_05175 PF00591 Glycosyl transferase family, a/b domain FK178_05175 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FK178_05180 PF00753 Metallo-beta-lactamase superfamily FK178_05180 PF10996 Beta-Casp domain FK178_05180 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FK178_05200 PF00543 Nitrogen regulatory protein P-II FK178_05210 PF04945 YHS domain FK178_05235 PF06965 Na+/H+ antiporter 1 FK178_05250 PF04945 YHS domain FK178_05260 PF00873 AcrB/AcrD/AcrF family FK178_05315 PF07731 Multicopper oxidase FK178_05315 PF00394 Multicopper oxidase FK178_05315 PF07732 Multicopper oxidase FK178_05345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK178_05355 PF01022 Bacterial regulatory protein, arsR family FK178_05365 PF00873 AcrB/AcrD/AcrF family FK178_05375 PF00543 Nitrogen regulatory protein P-II FK178_05385 PF00403 Heavy-metal-associated domain FK178_05400 PF00834 Ribulose-phosphate 3 epimerase family FK178_05420 PF13520 Amino acid permease FK178_05425 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_05425 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK178_05445 PF01252 Signal peptidase (SPase) II FK178_05490 PF04122 Putative cell wall binding repeat 2 FK178_05490 PF01520 N-acetylmuramoyl-L-alanine amidase FK178_05545 PF00004 ATPase family associated with various cellular activities (AAA) FK178_05570 PF04002 RadC-like JAB domain FK178_05575 PF00436 Single-strand binding protein family FK178_05600 PF00072 Response regulator receiver domain FK178_05600 PF00486 Transcriptional regulatory protein, C terminal FK178_05610 PF01738 Dienelactone hydrolase family FK178_05610 PF00156 Phosphoribosyl transferase domain FK178_05635 PF00027 Cyclic nucleotide-binding domain FK178_05635 PF13545 Crp-like helix-turn-helix domain FK178_05640 PF13579 Glycosyl transferase 4-like domain FK178_05640 PF00534 Glycosyl transferases group 1 FK178_05655 PF02146 Sir2 family FK178_05660 PF08328 Adenylosuccinate lyase C-terminal FK178_05660 PF00206 Lyase FK178_05695 PF07715 TonB-dependent Receptor Plug Domain FK178_05695 PF00593 TonB dependent receptor FK178_05705 PF01032 FecCD transport family FK178_05710 PF00005 ABC transporter FK178_05715 PF02646 RmuC family FK178_05730 PF03061 Thioesterase superfamily FK178_05735 PF13593 SBF-like CPA transporter family (DUF4137) FK178_05740 PF04241 Protein of unknown function (DUF423) FK178_05750 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FK178_05750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FK178_05750 PF02142 MGS-like domain FK178_05755 PF00468 Ribosomal protein L34 FK178_05785 PF01938 TRAM domain FK178_05785 PF00919 Uncharacterized protein family UPF0004 FK178_05785 PF04055 Radical SAM superfamily FK178_05795 PF01197 Ribosomal protein L31 FK178_05805 PF00535 Glycosyl transferase family 2 FK178_05810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FK178_05810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FK178_05810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FK178_05810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FK178_05815 PF00664 ABC transporter transmembrane region FK178_05815 PF00005 ABC transporter FK178_05820 PF08281 Sigma-70, region 4 FK178_05820 PF04542 Sigma-70 region 2 FK178_05840 PF01189 16S rRNA methyltransferase RsmB/F FK178_05840 PF01029 NusB family FK178_05850 PF02769 AIR synthase related protein, C-terminal domain FK178_05850 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FK178_05850 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FK178_05855 PF00501 AMP-binding enzyme FK178_05860 PF00248 Aldo/keto reductase family FK178_05870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FK178_05870 PF00378 Enoyl-CoA hydratase/isomerase FK178_05870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FK178_05880 PF00108 Thiolase, N-terminal domain FK178_05880 PF02803 Thiolase, C-terminal domain FK178_05885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK178_05885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK178_05885 PF02770 Acyl-CoA dehydrogenase, middle domain FK178_05890 PF00723 Glycosyl hydrolases family 15 FK178_05895 PF00982 Glycosyltransferase family 20 FK178_05905 PF04389 Peptidase family M28 FK178_05905 PF04151 Bacterial pre-peptidase C-terminal domain FK178_05925 PF09371 Tex-like protein N-terminal domain FK178_05925 PF17674 HHH domain FK178_05925 PF00575 S1 RNA binding domain FK178_05925 PF16921 Tex protein YqgF-like domain FK178_05940 PF00593 TonB dependent receptor FK178_05940 PF07715 TonB-dependent Receptor Plug Domain FK178_05945 PF07980 SusD family FK178_05945 PF14322 Starch-binding associating with outer membrane FK178_05975 PF05199 GMC oxidoreductase FK178_05975 PF00732 GMC oxidoreductase FK178_05985 PF03825 Nucleoside H+ symporter FK178_05990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FK178_05990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FK178_06015 PF04542 Sigma-70 region 2 FK178_06015 PF04545 Sigma-70, region 4 FK178_06045 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FK178_06075 PF17863 AAA lid domain FK178_06075 PF07726 ATPase family associated with various cellular activities (AAA) FK178_06085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FK178_06085 PF03466 LysR substrate binding domain FK178_06110 PF03551 Transcriptional regulator PadR-like family FK178_06130 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_06135 PF03458 UPF0126 domain FK178_06150 PF01039 Carboxyl transferase domain FK178_06155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FK178_06155 PF00289 Biotin carboxylase, N-terminal domain FK178_06155 PF02785 Biotin carboxylase C-terminal domain FK178_06165 PF16123 Hydroxyacylglutathione hydrolase C-terminus FK178_06165 PF00753 Metallo-beta-lactamase superfamily FK178_06180 PF01925 Sulfite exporter TauE/SafE FK178_06190 PF03006 Haemolysin-III related FK178_06200 PF00149 Calcineurin-like phosphoesterase FK178_06200 PF12320 Type 5 capsule protein repressor C-terminal domain FK178_06205 PF13476 AAA domain FK178_06215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK178_06215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK178_06220 PF07995 Glucose / Sorbosone dehydrogenase FK178_06225 PF01590 GAF domain FK178_06225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_06225 PF00512 His Kinase A (phospho-acceptor) domain FK178_06225 PF08446 PAS fold FK178_06225 PF00360 Phytochrome region FK178_06230 PF02601 Exonuclease VII, large subunit FK178_06230 PF13742 OB-fold nucleic acid binding domain FK178_06235 PF02609 Exonuclease VII small subunit FK178_06245 PF02469 Fasciclin domain FK178_06250 PF13473 Cupredoxin-like domain FK178_06250 PF18764 Nitrous oxide reductase propeller repeat FK178_06250 PF18793 Nitrous oxide reductase propeller repeat 2 FK178_06265 PF05048 Periplasmic copper-binding protein (NosD) FK178_06270 PF00005 ABC transporter FK178_06280 PF02445 Quinolinate synthetase A protein FK178_06285 PF00890 FAD binding domain FK178_06285 PF02910 Fumarate reductase flavoprotein C-term FK178_06295 PF00999 Sodium/hydrogen exchanger family FK178_06295 PF02254 TrkA-N domain FK178_06300 PF02586 SOS response associated peptidase (SRAP) FK178_06315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FK178_06320 PF04264 YceI-like domain FK178_06335 PF07237 Protein of unknown function (DUF1428) FK178_06370 PF02371 Transposase IS116/IS110/IS902 family FK178_06370 PF01548 Transposase FK178_06385 PF13495 Phage integrase, N-terminal SAM-like domain FK178_06385 PF00589 Phage integrase family FK178_06405 PF00781 Diacylglycerol kinase catalytic domain FK178_06410 PF01975 Survival protein SurE FK178_06420 PF07715 TonB-dependent Receptor Plug Domain FK178_06420 PF00593 TonB dependent receptor FK178_06430 PF00072 Response regulator receiver domain FK178_06430 PF00486 Transcriptional regulatory protein, C terminal FK178_06445 PF00535 Glycosyl transferase family 2 FK178_06455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_06455 PF09308 LuxQ, periplasmic FK178_06455 PF00512 His Kinase A (phospho-acceptor) domain FK178_06455 PF00072 Response regulator receiver domain FK178_06460 PF00486 Transcriptional regulatory protein, C terminal FK178_06460 PF00072 Response regulator receiver domain FK178_06475 PF07676 WD40-like Beta Propeller Repeat FK178_06475 PF04052 TolB amino-terminal domain FK178_06480 PF02899 Phage integrase, N-terminal SAM-like domain FK178_06480 PF00589 Phage integrase family FK178_06490 PF07995 Glucose / Sorbosone dehydrogenase FK178_06495 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FK178_06495 PF00034 Cytochrome c FK178_06500 PF00485 Phosphoribulokinase / Uridine kinase family FK178_06510 PF01642 Methylmalonyl-CoA mutase FK178_06515 PF01642 Methylmalonyl-CoA mutase FK178_06515 PF02310 B12 binding domain FK178_06525 PF13614 AAA domain FK178_06530 PF17762 HTH domain found in ParB protein FK178_06530 PF02195 ParB-like nuclease domain FK178_06540 PF05173 Dihydrodipicolinate reductase, C-terminus FK178_06540 PF01113 Dihydrodipicolinate reductase, N-terminus FK178_06545 PF10502 Signal peptidase, peptidase S26 FK178_06550 PF08889 WbqC-like protein family FK178_06565 PF01694 Rhomboid family FK178_06565 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FK178_06570 PF01119 DNA mismatch repair protein, C-terminal domain FK178_06570 PF08676 MutL C terminal dimerisation domain FK178_06580 PF00885 6,7-dimethyl-8-ribityllumazine synthase FK178_06590 PF02463 RecF/RecN/SMC N terminal domain FK178_06605 PF00334 Nucleoside diphosphate kinase FK178_06615 PF02272 DHHA1 domain FK178_06615 PF01368 DHH family FK178_06625 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FK178_06630 PF01546 Peptidase family M20/M25/M40 FK178_06630 PF07687 Peptidase dimerisation domain FK178_06640 PF01979 Amidohydrolase family FK178_06650 PF00588 SpoU rRNA Methylase family FK178_06650 PF08032 RNA 2'-O ribose methyltransferase substrate binding FK178_06655 PF01435 Peptidase family M48 FK178_06655 PF16491 CAAX prenyl protease N-terminal, five membrane helices FK178_06660 PF04607 Region found in RelA / SpoT proteins FK178_06660 PF02824 TGS domain FK178_06660 PF13291 ACT domain FK178_06665 PF01475 Ferric uptake regulator family FK178_06670 PF00709 Adenylosuccinate synthetase FK178_06690 PF00202 Aminotransferase class-III FK178_06710 PF08501 Shikimate dehydrogenase substrate binding domain FK178_06710 PF01488 Shikimate / quinate 5-dehydrogenase FK178_06710 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FK178_06730 PF03819 MazG nucleotide pyrophosphohydrolase domain FK178_06745 PF03652 Holliday junction resolvase FK178_06755 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_06755 PF14602 Hexapeptide repeat of succinyl-transferase FK178_06755 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FK178_06770 PF00535 Glycosyl transferase family 2 FK178_06775 PF00534 Glycosyl transferases group 1 FK178_06775 PF13439 Glycosyltransferase Family 4 FK178_06780 PF00534 Glycosyl transferases group 1 FK178_06780 PF13439 Glycosyltransferase Family 4 FK178_06785 PF01300 Telomere recombination FK178_06790 PF12627 Probable RNA and SrmB- binding site of polymerase A FK178_06790 PF01743 Poly A polymerase head domain FK178_06790 PF13735 tRNA nucleotidyltransferase domain 2 putative FK178_06795 PF02628 Cytochrome oxidase assembly protein FK178_06815 PF00005 ABC transporter FK178_06835 PF17757 UvrB interaction domain FK178_06835 PF12344 Ultra-violet resistance protein B FK178_06835 PF04851 Type III restriction enzyme, res subunit FK178_06835 PF00271 Helicase conserved C-terminal domain FK178_06845 PF00011 Hsp20/alpha crystallin family FK178_06850 PF10011 Predicted membrane protein (DUF2254) FK178_06875 PF01171 PP-loop family FK178_06875 PF11734 TilS substrate C-terminal domain FK178_06880 PF00425 chorismate binding enzyme FK178_06880 PF04715 Anthranilate synthase component I, N terminal region FK178_06890 PF00270 DEAD/DEAH box helicase FK178_06890 PF00271 Helicase conserved C-terminal domain FK178_06900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK178_06900 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_06910 PF01037 Lrp/AsnC ligand binding domain FK178_06920 PF03553 Na+/H+ antiporter family FK178_06925 PF00578 AhpC/TSA family FK178_06925 PF10417 C-terminal domain of 1-Cys peroxiredoxin FK178_06940 PF08534 Redoxin FK178_06950 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FK178_06950 PF17854 FtsK alpha domain FK178_06950 PF09397 Ftsk gamma domain FK178_06950 PF01580 FtsK/SpoIIIE family FK178_06965 PF00925 GTP cyclohydrolase II FK178_06965 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FK178_06975 PF02698 DUF218 domain FK178_07000 PF00313 'Cold-shock' DNA-binding domain FK178_07025 PF00117 Glutamine amidotransferase class-I FK178_07025 PF06418 CTP synthase N-terminus FK178_07030 PF14849 YidC periplasmic domain FK178_07030 PF02096 60Kd inner membrane protein FK178_07035 PF02469 Fasciclin domain FK178_07050 PF03060 Nitronate monooxygenase FK178_07070 PF02540 NAD synthase FK178_07070 PF00117 Glutamine amidotransferase class-I FK178_07070 PF00958 GMP synthase C terminal domain FK178_07080 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FK178_07080 PF01243 Pyridoxamine 5'-phosphate oxidase FK178_07085 PF07715 TonB-dependent Receptor Plug Domain FK178_07085 PF00593 TonB dependent receptor FK178_07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_07095 PF07694 5TMR of 5TMR-LYT FK178_07095 PF06580 Histidine kinase FK178_07105 PF00072 Response regulator receiver domain FK178_07105 PF04397 LytTr DNA-binding domain FK178_07120 PF01053 Cys/Met metabolism PLP-dependent enzyme FK178_07125 PF01979 Amidohydrolase family FK178_07130 PF00491 Arginase family FK178_07160 PF00464 Serine hydroxymethyltransferase FK178_07180 PF02861 Clp amino terminal domain, pathogenicity island component FK178_07180 PF17871 AAA lid domain FK178_07180 PF10431 C-terminal, D2-small domain, of ClpB protein FK178_07180 PF07724 AAA domain (Cdc48 subfamily) FK178_07180 PF00004 ATPase family associated with various cellular activities (AAA) FK178_07185 PF05532 CsbD-like FK178_07200 PF00271 Helicase conserved C-terminal domain FK178_07200 PF00270 DEAD/DEAH box helicase FK178_07205 PF12848 ABC transporter FK178_07205 PF00005 ABC transporter FK178_07220 PF01039 Carboxyl transferase domain FK178_07245 PF13193 AMP-binding enzyme C-terminal domain FK178_07245 PF00501 AMP-binding enzyme FK178_07250 PF02517 CPBP intramembrane metalloprotease FK178_07255 PF13378 Enolase C-terminal domain-like FK178_07255 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FK178_07265 PF01040 UbiA prenyltransferase family FK178_07290 PF01300 Telomere recombination FK178_07295 PF13361 UvrD-like helicase C-terminal domain FK178_07295 PF00580 UvrD/REP helicase N-terminal domain FK178_07305 PF01546 Peptidase family M20/M25/M40 FK178_07305 PF07687 Peptidase dimerisation domain FK178_07330 PF17191 RecG wedge domain FK178_07330 PF00271 Helicase conserved C-terminal domain FK178_07330 PF00270 DEAD/DEAH box helicase FK178_07360 PF03484 tRNA synthetase B5 domain FK178_07360 PF03483 B3/4 domain FK178_07360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FK178_07360 PF01588 Putative tRNA binding domain FK178_07360 PF03147 Ferredoxin-fold anticodon binding domain FK178_07365 PF02469 Fasciclin domain FK178_07385 PF00005 ABC transporter FK178_07385 PF12848 ABC transporter FK178_07395 PF00923 Transaldolase/Fructose-6-phosphate aldolase FK178_07400 PF00106 short chain dehydrogenase FK178_07420 PF00202 Aminotransferase class-III FK178_07425 PF01476 LysM domain FK178_07425 PF05257 CHAP domain FK178_07430 PF00291 Pyridoxal-phosphate dependent enzyme FK178_07445 PF01175 Urocanase Rossmann-like domain FK178_07445 PF17391 Urocanase N-terminal domain FK178_07445 PF17392 Urocanase C-terminal domain FK178_07470 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FK178_07470 PF01411 tRNA synthetases class II (A) FK178_07470 PF02272 DHHA1 domain FK178_07475 PF01551 Peptidase family M23 FK178_07475 PF08460 Bacterial SH3 domain FK178_07495 PF04536 TPM domain FK178_07505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FK178_07505 PF01926 50S ribosome-binding GTPase FK178_07510 PF03358 NADPH-dependent FMN reductase FK178_07515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FK178_07515 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FK178_07530 PF06965 Na+/H+ antiporter 1 FK178_07550 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FK178_07550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FK178_07570 PF01895 PhoU domain FK178_07575 PF00005 ABC transporter FK178_07580 PF00528 Binding-protein-dependent transport system inner membrane component FK178_07585 PF00528 Binding-protein-dependent transport system inner membrane component FK178_07590 PF12849 PBP superfamily domain FK178_07605 PF08240 Alcohol dehydrogenase GroES-like domain FK178_07605 PF00107 Zinc-binding dehydrogenase FK178_07620 PF14602 Hexapeptide repeat of succinyl-transferase FK178_07620 PF12464 Maltose acetyltransferase FK178_07625 PF02225 PA domain FK178_07625 PF04389 Peptidase family M28 FK178_07630 PF00282 Pyridoxal-dependent decarboxylase conserved domain FK178_07635 PF10079 Bacillithiol biosynthesis BshC FK178_07660 PF01699 Sodium/calcium exchanger protein FK178_07675 PF05139 Erythromycin esterase FK178_07675 PF00156 Phosphoribosyl transferase domain FK178_07680 PF01791 DeoC/LacD family aldolase FK178_07690 PF04055 Radical SAM superfamily FK178_07690 PF18693 TRAM domain FK178_07690 PF00919 Uncharacterized protein family UPF0004 FK178_07695 PF03576 Peptidase family S58 FK178_07700 PF01063 Amino-transferase class IV FK178_07710 PF01425 Amidase FK178_07715 PF00448 SRP54-type protein, GTPase domain FK178_07715 PF02881 SRP54-type protein, helical bundle domain FK178_07725 PF00471 Ribosomal protein L33 FK178_07730 PF00830 Ribosomal L28 family FK178_07735 PF02464 Competence-damaged protein FK178_07735 PF00994 Probable molybdopterin binding domain FK178_07735 PF18146 Damage-inducible protein CinA KH domain FK178_07745 PF01557 Fumarylacetoacetate (FAA) hydrolase family FK178_07755 PF00364 Biotin-requiring enzyme FK178_07755 PF02817 e3 binding domain FK178_07755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FK178_07760 PF02132 RecR protein FK178_07760 PF13662 Toprim domain FK178_07765 PF00474 Sodium:solute symporter family FK178_07780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FK178_07780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FK178_07785 PF00326 Prolyl oligopeptidase family FK178_07790 PF03109 ABC1 family FK178_07800 PF00183 Hsp90 protein FK178_07805 PF00072 Response regulator receiver domain FK178_07805 PF01627 Hpt domain FK178_07805 PF00512 His Kinase A (phospho-acceptor) domain FK178_07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_07805 PF00672 HAMP domain FK178_07805 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FK178_07870 PF01238 Phosphomannose isomerase type I FK178_07875 PF00578 AhpC/TSA family FK178_07885 PF00293 NUDIX domain FK178_07890 PF03144 Elongation factor Tu domain 2 FK178_07890 PF00009 Elongation factor Tu GTP binding domain FK178_07890 PF16658 Class II release factor RF3, C-terminal domain FK178_07920 PF04998 RNA polymerase Rpb1, domain 5 FK178_07920 PF00623 RNA polymerase Rpb1, domain 2 FK178_07920 PF04983 RNA polymerase Rpb1, domain 3 FK178_07920 PF05000 RNA polymerase Rpb1, domain 4 FK178_07920 PF04997 RNA polymerase Rpb1, domain 1 FK178_07925 PF04560 RNA polymerase Rpb2, domain 7 FK178_07925 PF04563 RNA polymerase beta subunit FK178_07925 PF04561 RNA polymerase Rpb2, domain 2 FK178_07925 PF04565 RNA polymerase Rpb2, domain 3 FK178_07925 PF10385 RNA polymerase beta subunit external 1 domain FK178_07925 PF00562 RNA polymerase Rpb2, domain 6 FK178_07930 PF00542 Ribosomal protein L7/L12 C-terminal domain FK178_07930 PF16320 Ribosomal protein L7/L12 dimerisation domain FK178_07935 PF00466 Ribosomal protein L10 FK178_07940 PF00687 Ribosomal protein L1p/L10e family FK178_07945 PF03946 Ribosomal protein L11, N-terminal domain FK178_07945 PF00298 Ribosomal protein L11, RNA binding domain FK178_07950 PF00467 KOW motif FK178_07950 PF02357 Transcription termination factor nusG FK178_07965 PF03144 Elongation factor Tu domain 2 FK178_07965 PF00009 Elongation factor Tu GTP binding domain FK178_07965 PF03143 Elongation factor Tu C-terminal domain FK178_07995 PF02899 Phage integrase, N-terminal SAM-like domain FK178_07995 PF00589 Phage integrase family FK178_08000 PF01165 Ribosomal protein S21 FK178_08005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK178_08005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK178_08005 PF02770 Acyl-CoA dehydrogenase, middle domain FK178_08015 PF01235 Sodium:alanine symporter family FK178_08050 PF00291 Pyridoxal-phosphate dependent enzyme FK178_08050 PF00571 CBS domain FK178_08055 PF12704 MacB-like periplasmic core domain FK178_08055 PF02687 FtsX-like permease family FK178_08060 PF07075 Protein of unknown function (DUF1343) FK178_08075 PF05175 Methyltransferase small domain FK178_08075 PF17827 PrmC N-terminal domain FK178_08085 PF07969 Amidohydrolase family FK178_08115 PF03144 Elongation factor Tu domain 2 FK178_08115 PF00009 Elongation factor Tu GTP binding domain FK178_08115 PF14492 Elongation Factor G, domain II FK178_08115 PF00679 Elongation factor G C-terminus FK178_08125 PF00793 DAHP synthetase I family FK178_08130 PF05552 Conserved TM helix FK178_08150 PF00593 TonB dependent receptor FK178_08150 PF07715 TonB-dependent Receptor Plug Domain FK178_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_08160 PF00989 PAS fold FK178_08160 PF00512 His Kinase A (phospho-acceptor) domain FK178_08165 PF02954 Bacterial regulatory protein, Fis family FK178_08165 PF00072 Response regulator receiver domain FK178_08165 PF00158 Sigma-54 interaction domain FK178_08175 PF03449 Transcription elongation factor, N-terminal FK178_08175 PF01272 Transcription elongation factor, GreA/GreB, C-term FK178_08200 PF04264 YceI-like domain FK178_08215 PF04264 YceI-like domain FK178_08225 PF05726 Pirin C-terminal cupin domain FK178_08225 PF02678 Pirin FK178_08250 PF01263 Aldose 1-epimerase FK178_08255 PF02699 Preprotein translocase subunit FK178_08265 PF01029 NusB family FK178_08270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FK178_08270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FK178_08275 PF00664 ABC transporter transmembrane region FK178_08275 PF00005 ABC transporter FK178_08300 PF07715 TonB-dependent Receptor Plug Domain FK178_08300 PF00593 TonB dependent receptor FK178_08300 PF07660 Secretin and TonB N terminus short domain FK178_08305 PF01588 Putative tRNA binding domain FK178_08320 PF10417 C-terminal domain of 1-Cys peroxiredoxin FK178_08320 PF00578 AhpC/TSA family FK178_08330 PF00570 HRDC domain FK178_08330 PF09382 RQC domain FK178_08330 PF16124 RecQ zinc-binding FK178_08330 PF00271 Helicase conserved C-terminal domain FK178_08330 PF00270 DEAD/DEAH box helicase FK178_08335 PF00571 CBS domain FK178_08335 PF01380 SIS domain FK178_08340 PF00902 Sec-independent protein translocase protein (TatC) FK178_08345 PF02627 Carboxymuconolactone decarboxylase family FK178_08355 PF00005 ABC transporter FK178_08355 PF12399 Branched-chain amino acid ATP-binding cassette transporter FK178_08360 PF04480 Protein of unknown function (DUF559) FK178_08370 PF00795 Carbon-nitrogen hydrolase FK178_08375 PF02397 Bacterial sugar transferase FK178_08380 PF13439 Glycosyltransferase Family 4 FK178_08380 PF00534 Glycosyl transferases group 1 FK178_08385 PF00534 Glycosyl transferases group 1 FK178_08410 PF05050 Methyltransferase FkbM domain FK178_08415 PF13439 Glycosyltransferase Family 4 FK178_08445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK178_08445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK178_08450 PF02348 Cytidylyltransferase FK178_08465 PF08666 SAF domain FK178_08465 PF03102 NeuB family FK178_08480 PF02350 UDP-N-acetylglucosamine 2-epimerase FK178_08485 PF00535 Glycosyl transferase family 2 FK178_08490 PF00535 Glycosyl transferase family 2 FK178_08495 PF00535 Glycosyl transferase family 2 FK178_08500 PF13439 Glycosyltransferase Family 4 FK178_08500 PF00534 Glycosyl transferases group 1 FK178_08505 PF00535 Glycosyl transferase family 2 FK178_08515 PF00535 Glycosyl transferase family 2 FK178_08525 PF01531 Glycosyl transferase family 11 FK178_08530 PF01370 NAD dependent epimerase/dehydratase family FK178_08535 PF16363 GDP-mannose 4,6 dehydratase FK178_08560 PF00005 ABC transporter FK178_08560 PF14524 Wzt C-terminal domain FK178_08575 PF07715 TonB-dependent Receptor Plug Domain FK178_08575 PF00593 TonB dependent receptor FK178_08585 PF00675 Insulinase (Peptidase family M16) FK178_08585 PF05193 Peptidase M16 inactive domain FK178_08610 PF00155 Aminotransferase class I and II FK178_08625 PF01370 NAD dependent epimerase/dehydratase family FK178_08630 PF16363 GDP-mannose 4,6 dehydratase FK178_08640 PF13807 G-rich domain on putative tyrosine kinase FK178_08640 PF02706 Chain length determinant protein FK178_08640 PF13614 AAA domain FK178_08660 PF00005 ABC transporter FK178_08660 PF12848 ABC transporter FK178_08660 PF16326 ABC transporter C-terminal domain FK178_08675 PF00005 ABC transporter FK178_08685 PF01923 Cobalamin adenosyltransferase FK178_08695 PF07516 SecA Wing and Scaffold domain FK178_08695 PF01043 SecA preprotein cross-linking domain FK178_08695 PF07517 SecA DEAD-like domain FK178_08730 PF02566 OsmC-like protein FK178_08740 PF01370 NAD dependent epimerase/dehydratase family FK178_08745 PF00535 Glycosyl transferase family 2 FK178_08755 PF01569 PAP2 superfamily FK178_08765 PF01554 MatE FK178_08770 PF02225 PA domain FK178_08770 PF04389 Peptidase family M28 FK178_08775 PF03976 Polyphosphate kinase 2 (PPK2) FK178_08785 PF00158 Sigma-54 interaction domain FK178_08785 PF02954 Bacterial regulatory protein, Fis family FK178_08785 PF00072 Response regulator receiver domain FK178_08795 PF12794 Mechanosensitive ion channel inner membrane domain 1 FK178_08795 PF12795 Mechanosensitive ion channel porin domain FK178_08795 PF00924 Mechanosensitive ion channel FK178_08805 PF13732 Domain of unknown function (DUF4162) FK178_08805 PF00005 ABC transporter FK178_08810 PF00226 DnaJ domain FK178_08810 PF01556 DnaJ C terminal domain FK178_08810 PF00684 DnaJ central domain FK178_08815 PF01025 GrpE FK178_08825 PF08338 Domain of unknown function (DUF1731) FK178_08825 PF01370 NAD dependent epimerase/dehydratase family FK178_08830 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FK178_08830 PF01266 FAD dependent oxidoreductase FK178_08840 PF01063 Amino-transferase class IV FK178_08865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FK178_08885 PF00271 Helicase conserved C-terminal domain FK178_08885 PF00270 DEAD/DEAH box helicase FK178_08890 PF01209 ubiE/COQ5 methyltransferase family FK178_08895 PF04542 Sigma-70 region 2 FK178_08895 PF08281 Sigma-70, region 4 FK178_08900 PF01037 Lrp/AsnC ligand binding domain FK178_08910 PF01914 MarC family integral membrane protein FK178_08915 PF01642 Methylmalonyl-CoA mutase FK178_08915 PF02310 B12 binding domain FK178_08930 PF01497 Periplasmic binding protein FK178_08935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FK178_08940 PF03462 PCRF domain FK178_08940 PF00472 RF-1 domain FK178_08950 PF00586 AIR synthase related protein, N-terminal domain FK178_08950 PF02769 AIR synthase related protein, C-terminal domain FK178_08955 PF18318 Glutamine synthetase C-terminal domain FK178_08955 PF00120 Glutamine synthetase, catalytic domain FK178_08955 PF12437 Glutamine synthetase type III N terminal FK178_08960 PF01699 Sodium/calcium exchanger protein FK178_08975 PF00905 Penicillin binding protein transpeptidase domain FK178_08975 PF05569 BlaR1 peptidase M56 FK178_08985 PF00156 Phosphoribosyl transferase domain FK178_08990 PF03358 NADPH-dependent FMN reductase FK178_09000 PF01139 tRNA-splicing ligase RtcB FK178_09005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FK178_09005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FK178_09010 PF01235 Sodium:alanine symporter family FK178_09040 PF05728 Uncharacterised protein family (UPF0227) FK178_09065 PF00121 Triosephosphate isomerase FK178_09080 PF00809 Pterin binding enzyme FK178_09085 PF02457 DisA bacterial checkpoint controller nucleotide-binding FK178_09090 PF00664 ABC transporter transmembrane region FK178_09090 PF00005 ABC transporter FK178_09095 PF01416 tRNA pseudouridine synthase FK178_09110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FK178_09110 PF07497 Rho termination factor, RNA-binding domain FK178_09130 PF02540 NAD synthase FK178_09135 PF00196 Bacterial regulatory proteins, luxR family FK178_09135 PF00072 Response regulator receiver domain FK178_09140 PF10410 DnaB-helicase binding domain of primase FK178_09140 PF08275 DNA primase catalytic core, N-terminal domain FK178_09140 PF01807 CHC2 zinc finger FK178_09160 PF00135 Carboxylesterase family FK178_09175 PF16385 Domain of unknown function FK178_09175 PF00884 Sulfatase FK178_09185 PF03781 Sulfatase-modifying factor enzyme 1 FK178_09220 PF07980 SusD family FK178_09220 PF14322 Starch-binding associating with outer membrane FK178_09225 PF00593 TonB dependent receptor FK178_09225 PF07715 TonB-dependent Receptor Plug Domain FK178_09235 PF00884 Sulfatase FK178_09235 PF16347 Domain of unknown function (DUF4976) FK178_09240 PF00348 Polyprenyl synthetase FK178_09245 PF04055 Radical SAM superfamily FK178_09250 PF02547 Queuosine biosynthesis protein FK178_09255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FK178_09280 PF02580 D-Tyr-tRNA(Tyr) deacylase FK178_09285 PF03193 RsgA GTPase FK178_09285 PF16745 RsgA N-terminal domain FK178_09295 PF18152 DAHP synthase ferredoxin-like domain FK178_09295 PF00793 DAHP synthetase I family FK178_09305 PF00155 Aminotransferase class I and II FK178_09310 PF01842 ACT domain FK178_09310 PF01817 Chorismate mutase type II FK178_09310 PF00800 Prephenate dehydratase FK178_09315 PF00005 ABC transporter FK178_09330 PF02219 Methylenetetrahydrofolate reductase FK178_09340 PF02310 B12 binding domain FK178_09340 PF02574 Homocysteine S-methyltransferase FK178_09340 PF02607 B12 binding domain FK178_09340 PF00809 Pterin binding enzyme FK178_09340 PF02965 Vitamin B12 dependent methionine synthase, activation domain FK178_09350 PF01053 Cys/Met metabolism PLP-dependent enzyme FK178_09355 PF13840 ACT domain FK178_09355 PF00742 Homoserine dehydrogenase FK178_09355 PF01842 ACT domain FK178_09355 PF03447 Homoserine dehydrogenase, NAD binding domain FK178_09355 PF00696 Amino acid kinase family FK178_09360 PF00561 alpha/beta hydrolase fold FK178_09365 PF01053 Cys/Met metabolism PLP-dependent enzyme FK178_09370 PF02772 S-adenosylmethionine synthetase, central domain FK178_09370 PF00438 S-adenosylmethionine synthetase, N-terminal domain FK178_09370 PF02773 S-adenosylmethionine synthetase, C-terminal domain FK178_09375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK178_09375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK178_09375 PF02770 Acyl-CoA dehydrogenase, middle domain FK178_09380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK178_09385 PF00582 Universal stress protein family FK178_09415 PF00211 Adenylate and Guanylate cyclase catalytic domain FK178_09445 PF01979 Amidohydrolase family FK178_09460 PF01712 Deoxynucleoside kinase FK178_09475 PF04679 ATP dependent DNA ligase C terminal region FK178_09475 PF01068 ATP dependent DNA ligase domain FK178_09475 PF13298 DNA polymerase Ligase (LigD) FK178_09480 PF02735 Ku70/Ku80 beta-barrel domain FK178_09495 PF00719 Inorganic pyrophosphatase FK178_09510 PF02780 Transketolase, C-terminal domain FK178_09510 PF02779 Transketolase, pyrimidine binding domain FK178_09510 PF00364 Biotin-requiring enzyme FK178_09515 PF01012 Electron transfer flavoprotein domain FK178_09520 PF01012 Electron transfer flavoprotein domain FK178_09520 PF00766 Electron transfer flavoprotein FAD-binding domain FK178_09530 PF07670 Nucleoside recognition FK178_09530 PF07662 Na+ dependent nucleoside transporter C-terminus FK178_09530 PF01773 Na+ dependent nucleoside transporter N-terminus FK178_09535 PF00303 Thymidylate synthase FK178_09550 PF03781 Sulfatase-modifying factor enzyme 1 FK178_09550 PF12867 DinB superfamily FK178_09575 PF00186 Dihydrofolate reductase FK178_09580 PF03881 Fructosamine kinase FK178_09590 PF00698 Acyl transferase domain FK178_09605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FK178_09630 PF11799 impB/mucB/samB family C-terminal domain FK178_09630 PF11798 IMS family HHH motif FK178_09630 PF00817 impB/mucB/samB family FK178_09635 PF07733 Bacterial DNA polymerase III alpha NTPase domain FK178_09635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FK178_09635 PF14579 Helix-hairpin-helix motif FK178_09635 PF02811 PHP domain FK178_09635 PF01336 OB-fold nucleic acid binding domain FK178_09660 PF00072 Response regulator receiver domain FK178_09660 PF00486 Transcriptional regulatory protein, C terminal FK178_09665 PF13426 PAS domain FK178_09665 PF00672 HAMP domain FK178_09665 PF00512 His Kinase A (phospho-acceptor) domain FK178_09665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_09685 PF01427 D-ala-D-ala dipeptidase FK178_09715 PF00675 Insulinase (Peptidase family M16) FK178_09715 PF05193 Peptidase M16 inactive domain FK178_09780 PF00182 Chitinase class I FK178_09795 PF05190 MutS family domain IV FK178_09795 PF05192 MutS domain III FK178_09795 PF05188 MutS domain II FK178_09795 PF01624 MutS domain I FK178_09795 PF00488 MutS domain V FK178_09800 PF00005 ABC transporter FK178_09810 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_09815 PF01979 Amidohydrolase family FK178_09815 PF13382 Adenine deaminase C-terminal domain FK178_09825 PF00588 SpoU rRNA Methylase family FK178_09825 PF08032 RNA 2'-O ribose methyltransferase substrate binding FK178_09835 PF01712 Deoxynucleoside kinase FK178_09865 PF07650 KH domain FK178_09865 PF01926 50S ribosome-binding GTPase FK178_09870 PF01740 STAS domain FK178_09870 PF00916 Sulfate permease family FK178_09895 PF08448 PAS fold FK178_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_09895 PF00512 His Kinase A (phospho-acceptor) domain FK178_09895 PF00072 Response regulator receiver domain FK178_09895 PF13426 PAS domain FK178_09900 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_09905 PF02254 TrkA-N domain FK178_09905 PF02080 TrkA-C domain FK178_09910 PF02386 Cation transport protein FK178_09915 PF00072 Response regulator receiver domain FK178_09915 PF00486 Transcriptional regulatory protein, C terminal FK178_09920 PF13426 PAS domain FK178_09920 PF00512 His Kinase A (phospho-acceptor) domain FK178_09920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_09920 PF00672 HAMP domain FK178_09955 PF12848 ABC transporter FK178_09955 PF00005 ABC transporter FK178_09955 PF16326 ABC transporter C-terminal domain FK178_09985 PF03781 Sulfatase-modifying factor enzyme 1 FK178_09995 PF01751 Toprim domain FK178_09995 PF13368 Topoisomerase C-terminal repeat FK178_09995 PF01131 DNA topoisomerase FK178_10005 PF04055 Radical SAM superfamily FK178_10005 PF00919 Uncharacterized protein family UPF0004 FK178_10005 PF01938 TRAM domain FK178_10010 PF02954 Bacterial regulatory protein, Fis family FK178_10010 PF00072 Response regulator receiver domain FK178_10010 PF00158 Sigma-54 interaction domain FK178_10030 PF00166 Chaperonin 10 Kd subunit FK178_10040 PF00118 TCP-1/cpn60 chaperonin family FK178_10085 PF07724 AAA domain (Cdc48 subfamily) FK178_10085 PF06689 ClpX C4-type zinc finger FK178_10085 PF10431 C-terminal, D2-small domain, of ClpB protein FK178_10090 PF00574 Clp protease FK178_10095 PF05698 Bacterial trigger factor protein (TF) C-terminus FK178_10095 PF05697 Bacterial trigger factor protein (TF) FK178_10100 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV FK178_10115 PF00561 alpha/beta hydrolase fold FK178_10120 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FK178_10130 PF01513 ATP-NAD kinase FK178_10140 PF01255 Putative undecaprenyl diphosphate synthase FK178_10160 PF01177 Asp/Glu/Hydantoin racemase FK178_10170 PF01106 NifU-like domain FK178_10185 PF05552 Conserved TM helix FK178_10185 PF00924 Mechanosensitive ion channel FK178_10190 PF00814 Glycoprotease family FK178_10195 PF13533 Biotin-lipoyl like FK178_10210 PF04238 Protein of unknown function (DUF420) FK178_10215 PF02630 SCO1/SenC FK178_10230 PF00510 Cytochrome c oxidase subunit III FK178_10235 PF00510 Cytochrome c oxidase subunit III FK178_10240 PF01040 UbiA prenyltransferase family FK178_10270 PF04264 YceI-like domain FK178_10280 PF04397 LytTr DNA-binding domain FK178_10280 PF00072 Response regulator receiver domain FK178_10290 PF00654 Voltage gated chloride channel FK178_10300 PF00144 Beta-lactamase FK178_10300 PF11954 Domain of unknown function (DUF3471) FK178_10330 PF01597 Glycine cleavage H-protein FK178_10340 PF01330 RuvA N terminal domain FK178_10340 PF07499 RuvA, C-terminal domain FK178_10345 PF00390 Malic enzyme, N-terminal domain FK178_10345 PF03949 Malic enzyme, NAD binding domain FK178_10345 PF01515 Phosphate acetyl/butaryl transferase FK178_10355 PF08331 Domain of unknown function (DUF1730) FK178_10365 PF00067 Cytochrome P450 FK178_10370 PF05496 Holliday junction DNA helicase RuvB P-loop domain FK178_10370 PF05491 RuvB C-terminal winged helix domain FK178_10370 PF17864 RuvB AAA lid domain FK178_10375 PF00115 Cytochrome C and Quinol oxidase polypeptide I FK178_10405 PF00037 4Fe-4S binding domain FK178_10405 PF13247 4Fe-4S dicluster domain FK178_10420 PF04760 Translation initiation factor IF-2, N-terminal region FK178_10420 PF11987 Translation-initiation factor 2 FK178_10420 PF00009 Elongation factor Tu GTP binding domain FK178_10425 PF08529 NusA N-terminal domain FK178_10425 PF00575 S1 RNA binding domain FK178_10425 PF13184 NusA-like KH domain FK178_10430 PF02576 RimP N-terminal domain FK178_10435 PF00582 Universal stress protein family FK178_10460 PF00672 HAMP domain FK178_10460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_10460 PF00512 His Kinase A (phospho-acceptor) domain FK178_10465 PF00072 Response regulator receiver domain FK178_10475 PF01814 Hemerythrin HHE cation binding domain FK178_10475 PF04405 Domain of Unknown function (DUF542) FK178_10490 PF00403 Heavy-metal-associated domain FK178_10495 PF10114 Sensory domain found in PocR FK178_10495 PF12833 Helix-turn-helix domain FK178_10500 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_10505 PF00694 Aconitase C-terminal domain FK178_10505 PF00330 Aconitase family (aconitate hydratase) FK178_10520 PF07732 Multicopper oxidase FK178_10540 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FK178_10540 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FK178_10545 PF13746 4Fe-4S dicluster domain FK178_10545 PF12801 4Fe-4S binding domain FK178_10545 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FK178_10575 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FK178_10575 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FK178_10580 PF00085 Thioredoxin FK178_10585 PF13545 Crp-like helix-turn-helix domain FK178_10585 PF00027 Cyclic nucleotide-binding domain FK178_10600 PF06969 HemN C-terminal domain FK178_10600 PF04055 Radical SAM superfamily FK178_10620 PF08245 Mur ligase middle domain FK178_10620 PF02875 Mur ligase family, glutamate ligase domain FK178_10630 PF02472 Biopolymer transport protein ExbD/TolR FK178_10635 PF01618 MotA/TolQ/ExbB proton channel family FK178_10645 PF03702 Anhydro-N-acetylmuramic acid kinase FK178_10650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK178_10650 PF02770 Acyl-CoA dehydrogenase, middle domain FK178_10650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK178_10695 PF00593 TonB dependent receptor FK178_10695 PF07715 TonB-dependent Receptor Plug Domain FK178_10705 PF00593 TonB dependent receptor FK178_10705 PF07715 TonB-dependent Receptor Plug Domain FK178_10710 PF01351 Ribonuclease HII FK178_10720 PF03099 Biotin/lipoate A/B protein ligase family FK178_10725 PF01679 Proteolipid membrane potential modulator FK178_10730 PF01336 OB-fold nucleic acid binding domain FK178_10730 PF00152 tRNA synthetases class II (D, K and N) FK178_10755 PF07885 Ion channel FK178_10770 PF12833 Helix-turn-helix domain FK178_10795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK178_10795 PF00529 HlyD membrane-fusion protein of T1SS FK178_10810 PF00873 AcrB/AcrD/AcrF family FK178_10835 PF12704 MacB-like periplasmic core domain FK178_10835 PF02687 FtsX-like permease family FK178_10835 PF00005 ABC transporter FK178_10840 PF02142 MGS-like domain FK178_10840 PF01808 AICARFT/IMPCHase bienzyme FK178_10860 PF00905 Penicillin binding protein transpeptidase domain FK178_10865 PF01098 Cell cycle protein FK178_10875 PF01975 Survival protein SurE FK178_10885 PF02684 Lipid-A-disaccharide synthetase FK178_10895 PF00753 Metallo-beta-lactamase superfamily FK178_10895 PF03772 Competence protein FK178_10895 PF13567 Domain of unknown function (DUF4131) FK178_10905 PF00854 POT family FK178_10910 PF00854 POT family FK178_10915 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region FK178_10915 PF00326 Prolyl oligopeptidase family FK178_10920 PF00368 Hydroxymethylglutaryl-coenzyme A reductase FK178_10930 PF09312 SurA N-terminal domain FK178_10930 PF00639 PPIC-type PPIASE domain FK178_10935 PF01595 Cyclin M transmembrane N-terminal domain FK178_10935 PF03471 Transporter associated domain FK178_10935 PF00571 CBS domain FK178_10960 PF03309 Type III pantothenate kinase FK178_10970 PF07690 Major Facilitator Superfamily FK178_10980 PF00072 Response regulator receiver domain FK178_10985 PF00989 PAS fold FK178_10985 PF00512 His Kinase A (phospho-acceptor) domain FK178_10985 PF00672 HAMP domain FK178_10985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_10995 PF03575 Peptidase family S51 FK178_11000 PF07980 SusD family FK178_11005 PF00593 TonB dependent receptor FK178_11005 PF07715 TonB-dependent Receptor Plug Domain FK178_11010 PF02627 Carboxymuconolactone decarboxylase family FK178_11025 PF01048 Phosphorylase superfamily FK178_11030 PF01209 ubiE/COQ5 methyltransferase family FK178_11035 PF18267 Rubredoxin NAD+ reductase C-terminal domain FK178_11035 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_11035 PF04324 BFD-like [2Fe-2S] binding domain FK178_11035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FK178_11035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FK178_11045 PF00535 Glycosyl transferase family 2 FK178_11065 PF03831 PhnA domain FK178_11065 PF08274 PhnA Zinc-Ribbon FK178_11090 PF09347 Domain of unknown function (DUF1989) FK178_11095 PF04299 Putative FMN-binding domain FK178_11105 PF04193 PQ loop repeat FK178_11120 PF03009 Glycerophosphoryl diester phosphodiesterase family FK178_11130 PF03073 TspO/MBR family FK178_11150 PF00849 RNA pseudouridylate synthase FK178_11150 PF01479 S4 domain FK178_11160 PF00491 Arginase family FK178_11180 PF01624 MutS domain I FK178_11180 PF05188 MutS domain II FK178_11180 PF05192 MutS domain III FK178_11180 PF05190 MutS family domain IV FK178_11180 PF00488 MutS domain V FK178_11195 PF09334 tRNA synthetases class I (M) FK178_11195 PF13603 Leucyl-tRNA synthetase, Domain 2 FK178_11195 PF08264 Anticodon-binding domain of tRNA FK178_11200 PF18075 FtsX extracellular domain FK178_11210 PF02673 Bacitracin resistance protein BacA FK178_11215 PF01509 TruB family pseudouridylate synthase (N terminal domain) FK178_11225 PF00117 Glutamine amidotransferase class-I FK178_11225 PF13302 Acetyltransferase (GNAT) domain FK178_11225 PF13673 Acetyltransferase (GNAT) domain FK178_11225 PF03352 Methyladenine glycosylase FK178_11225 PF00958 GMP synthase C terminal domain FK178_11230 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FK178_11240 PF01613 Flavin reductase like domain FK178_11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_11245 PF00512 His Kinase A (phospho-acceptor) domain FK178_11245 PF00989 PAS fold FK178_11255 PF01230 HIT domain FK178_11260 PF03449 Transcription elongation factor, N-terminal FK178_11260 PF01272 Transcription elongation factor, GreA/GreB, C-term FK178_11275 PF09308 LuxQ, periplasmic FK178_11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_11275 PF00072 Response regulator receiver domain FK178_11275 PF00512 His Kinase A (phospho-acceptor) domain FK178_11280 PF02954 Bacterial regulatory protein, Fis family FK178_11280 PF00158 Sigma-54 interaction domain FK178_11280 PF00072 Response regulator receiver domain FK178_11290 PF03462 PCRF domain FK178_11290 PF00472 RF-1 domain FK178_11305 PF04973 Nicotinamide mononucleotide transporter FK178_11315 PF01884 PcrB family FK178_11325 PF05221 S-adenosyl-L-homocysteine hydrolase FK178_11325 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FK178_11335 PF01016 Ribosomal L27 protein FK178_11340 PF00829 Ribosomal prokaryotic L21 protein FK178_11350 PF00675 Insulinase (Peptidase family M16) FK178_11350 PF05193 Peptidase M16 inactive domain FK178_11360 PF00892 EamA-like transporter family FK178_11370 PF00571 CBS domain FK178_11370 PF03471 Transporter associated domain FK178_11375 PF00436 Single-strand binding protein family FK178_11380 PF14815 NUDIX domain FK178_11380 PF00730 HhH-GPD superfamily base excision DNA repair protein FK178_11380 PF00633 Helix-hairpin-helix motif FK178_11385 PF00216 Bacterial DNA-binding protein FK178_11390 PF00575 S1 RNA binding domain FK178_11390 PF10150 Ribonuclease E/G family FK178_11410 PF02631 RecX family FK178_11425 PF06968 Biotin and Thiamin Synthesis associated domain FK178_11425 PF04055 Radical SAM superfamily FK178_11430 PF02801 Beta-ketoacyl synthase, C-terminal domain FK178_11430 PF00109 Beta-ketoacyl synthase, N-terminal domain FK178_11440 PF00202 Aminotransferase class-III FK178_11455 PF00155 Aminotransferase class I and II FK178_11460 PF02308 MgtC family FK178_11465 PF03334 Na+/H+ antiporter subunit FK178_11470 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FK178_11475 PF01899 Na+/H+ ion antiporter subunit FK178_11480 PF00361 Proton-conducting membrane transporter FK178_11485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FK178_11490 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FK178_11495 PF13244 Domain of unknown function (DUF4040) FK178_11495 PF00361 Proton-conducting membrane transporter FK178_11495 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FK178_11500 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FK178_11500 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FK178_11505 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FK178_11505 PF02874 ATP synthase alpha/beta family, beta-barrel domain FK178_11510 PF01380 SIS domain FK178_11520 PF00534 Glycosyl transferases group 1 FK178_11520 PF08323 Starch synthase catalytic domain FK178_11525 PF02569 Pantoate-beta-alanine ligase FK178_11530 PF02261 Aspartate decarboxylase FK178_11545 PF18073 Rubredoxin metal binding domain FK178_11555 PF00248 Aldo/keto reductase family FK178_11560 PF13677 Membrane MotB of proton-channel complex MotA/MotB FK178_11560 PF00691 OmpA family FK178_11565 PF03372 Endonuclease/Exonuclease/phosphatase family FK178_11575 PF03129 Anticodon binding domain FK178_11585 PF00156 Phosphoribosyl transferase domain FK178_11595 PF00795 Carbon-nitrogen hydrolase FK178_11605 PF00155 Aminotransferase class I and II FK178_11610 PF13085 2Fe-2S iron-sulfur cluster binding domain FK178_11610 PF13237 4Fe-4S dicluster domain FK178_11615 PF02910 Fumarate reductase flavoprotein C-term FK178_11615 PF00890 FAD binding domain FK178_11625 PF01556 DnaJ C terminal domain FK178_11625 PF00684 DnaJ central domain FK178_11625 PF00226 DnaJ domain FK178_11635 PF05195 Aminopeptidase P, N-terminal domain FK178_11635 PF00557 Metallopeptidase family M24 FK178_11640 PF05525 Branched-chain amino acid transport protein FK178_11645 PF12697 Alpha/beta hydrolase family FK178_11655 PF00586 AIR synthase related protein, N-terminal domain FK178_11655 PF02769 AIR synthase related protein, C-terminal domain FK178_11660 PF01521 Iron-sulphur cluster biosynthesis FK178_11670 PF01458 Uncharacterized protein family (UPF0051) FK178_11680 PF00005 ABC transporter FK178_11685 PF01458 Uncharacterized protein family (UPF0051) FK178_11700 PF02657 Fe-S metabolism associated domain FK178_11705 PF01883 Iron-sulfur cluster assembly protein FK178_11720 PF13167 GTP-binding GTPase N-terminal FK178_11720 PF01926 50S ribosome-binding GTPase FK178_11720 PF16360 GTP-binding GTPase Middle Region FK178_11755 PF00378 Enoyl-CoA hydratase/isomerase FK178_11760 PF00512 His Kinase A (phospho-acceptor) domain FK178_11760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_11760 PF00672 HAMP domain FK178_11765 PF03653 Uncharacterised protein family (UPF0093) FK178_11775 PF00762 Ferrochelatase FK178_11790 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FK178_11790 PF01488 Shikimate / quinate 5-dehydrogenase FK178_11790 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FK178_11795 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FK178_11795 PF03900 Porphobilinogen deaminase, C-terminal domain FK178_11805 PF01208 Uroporphyrinogen decarboxylase (URO-D) FK178_11815 PF01218 Coproporphyrinogen III oxidase FK178_11830 PF00490 Delta-aminolevulinic acid dehydratase FK178_11845 PF01595 Cyclin M transmembrane N-terminal domain FK178_11845 PF00571 CBS domain FK178_11850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FK178_11850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FK178_11865 PF00171 Aldehyde dehydrogenase family FK178_11870 PF06052 3-hydroxyanthranilic acid dioxygenase FK178_11875 PF01112 Asparaginase FK178_11890 PF01928 CYTH domain FK178_11895 PF13460 NAD(P)H-binding FK178_11900 PF11799 impB/mucB/samB family C-terminal domain FK178_11900 PF00817 impB/mucB/samB family FK178_11905 PF00391 PEP-utilising enzyme, mobile domain FK178_11905 PF02887 Pyruvate kinase, alpha/beta domain FK178_11905 PF00224 Pyruvate kinase, barrel domain FK178_11915 PF00035 Double-stranded RNA binding motif FK178_11915 PF14622 Ribonuclease-III-like FK178_11920 PF00109 Beta-ketoacyl synthase, N-terminal domain FK178_11920 PF02801 Beta-ketoacyl synthase, C-terminal domain FK178_11925 PF00550 Phosphopantetheine attachment site FK178_11930 PF00551 Formyl transferase FK178_11935 PF00075 RNase H FK178_11945 PF00156 Phosphoribosyl transferase domain FK178_11950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FK178_11950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FK178_11955 PF13361 UvrD-like helicase C-terminal domain FK178_11955 PF12705 PD-(D/E)XK nuclease superfamily FK178_11955 PF00580 UvrD/REP helicase N-terminal domain FK178_11960 PF00155 Aminotransferase class I and II FK178_11965 PF00691 OmpA family FK178_11965 PF05736 OprF membrane domain FK178_11990 PF00246 Zinc carboxypeptidase FK178_12000 PF01554 MatE FK178_12005 PF00378 Enoyl-CoA hydratase/isomerase FK178_12015 PF01242 6-pyruvoyl tetrahydropterin synthase FK178_12020 PF00149 Calcineurin-like phosphoesterase FK178_12025 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FK178_12025 PF01368 DHH family FK178_12025 PF02272 DHHA1 domain FK178_12025 PF17768 RecJ OB domain FK178_12030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FK178_12040 PF00265 Thymidine kinase FK178_12045 PF00842 Alanine racemase, C-terminal domain FK178_12045 PF01168 Alanine racemase, N-terminal domain FK178_12050 PF01741 Large-conductance mechanosensitive channel, MscL FK178_12055 PF02774 Semialdehyde dehydrogenase, dimerisation domain FK178_12055 PF01118 Semialdehyde dehydrogenase, NAD binding domain FK178_12080 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FK178_12080 PF00326 Prolyl oligopeptidase family FK178_12085 PF08402 TOBE domain FK178_12085 PF00005 ABC transporter FK178_12095 PF00912 Transglycosylase FK178_12105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FK178_12105 PF00289 Biotin carboxylase, N-terminal domain FK178_12105 PF02785 Biotin carboxylase C-terminal domain FK178_12110 PF00364 Biotin-requiring enzyme FK178_12115 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FK178_12115 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FK178_12120 PF01783 Ribosomal L32p protein family FK178_12130 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FK178_12135 PF00677 Lumazine binding domain FK178_12140 PF02469 Fasciclin domain FK178_12145 PF00557 Metallopeptidase family M24 FK178_12145 PF05195 Aminopeptidase P, N-terminal domain FK178_12150 PF00144 Beta-lactamase FK178_12150 PF11954 Domain of unknown function (DUF3471) FK178_12175 PF02033 Ribosome-binding factor A FK178_12180 PF02687 FtsX-like permease family FK178_12180 PF12704 MacB-like periplasmic core domain FK178_12185 PF01207 Dihydrouridine synthase (Dus) FK178_12195 PF01915 Glycosyl hydrolase family 3 C-terminal domain FK178_12195 PF00933 Glycosyl hydrolase family 3 N terminal domain FK178_12205 PF00480 ROK family FK178_12205 PF01047 MarR family FK178_12210 PF02585 GlcNAc-PI de-N-acetylase FK178_12210 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FK178_12215 PF01510 N-acetylmuramoyl-L-alanine amidase FK178_12220 PF07075 Protein of unknown function (DUF1343) FK178_12225 PF00877 NlpC/P60 family FK178_12230 PF13378 Enolase C-terminal domain-like FK178_12230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FK178_12235 PF00474 Sodium:solute symporter family FK178_12240 PF02638 Glycosyl hydrolase-like 10 FK178_12255 PF00593 TonB dependent receptor FK178_12255 PF07715 TonB-dependent Receptor Plug Domain FK178_12260 PF13580 SIS domain FK178_12265 PF02838 Glycosyl hydrolase family 20, domain 2 FK178_12265 PF00728 Glycosyl hydrolase family 20, catalytic domain FK178_12265 PF07691 PA14 domain FK178_12275 PF07690 Major Facilitator Superfamily FK178_12285 PF00582 Universal stress protein family FK178_12285 PF00999 Sodium/hydrogen exchanger family FK178_12290 PF00753 Metallo-beta-lactamase superfamily FK178_12295 PF00082 Subtilase family FK178_12300 PF11838 ERAP1-like C-terminal domain FK178_12300 PF01433 Peptidase family M1 domain FK178_12305 PF00825 Ribonuclease P FK178_12310 PF03572 Peptidase family S41 FK178_12310 PF13180 PDZ domain FK178_12315 PF13673 Acetyltransferase (GNAT) domain FK178_12320 PF02502 Ribose/Galactose Isomerase FK178_12325 PF08206 Ribonuclease B OB domain FK178_12325 PF00773 RNB domain FK178_12325 PF17876 Cold shock domain FK178_12325 PF00575 S1 RNA binding domain FK178_12345 PF02152 Dihydroneopterin aldolase FK178_12350 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FK178_12350 PF00749 tRNA synthetases class I (E and Q), catalytic domain FK178_12380 PF00749 tRNA synthetases class I (E and Q), catalytic domain FK178_12390 PF02130 Uncharacterized protein family UPF0054 FK178_12395 PF13932 GidA associated domain FK178_12395 PF01134 Glucose inhibited division protein A FK178_12400 PF13649 Methyltransferase domain FK178_12415 PF09115 DNA polymerase III, delta subunit, C terminal FK178_12420 PF00162 Phosphoglycerate kinase FK178_12425 PF01476 LysM domain FK178_12425 PF05257 CHAP domain FK178_12435 PF02416 mttA/Hcf106 family FK178_12440 PF08525 Opacity-associated protein A N-terminal motif FK178_12440 PF01551 Peptidase family M23 FK178_12440 PF01476 LysM domain FK178_12455 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FK178_12460 PF04321 RmlD substrate binding domain FK178_12465 PF01370 NAD dependent epimerase/dehydratase family FK178_12470 PF00535 Glycosyl transferase family 2 FK178_12475 PF00501 AMP-binding enzyme FK178_12475 PF14535 AMP-binding enzyme C-terminal domain FK178_12480 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FK178_12480 PF02843 Phosphoribosylglycinamide synthetase, C domain FK178_12480 PF02844 Phosphoribosylglycinamide synthetase, N domain FK178_12500 PF02086 D12 class N6 adenine-specific DNA methyltransferase FK178_12510 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FK178_12515 PF00970 Oxidoreductase FAD-binding domain FK178_12515 PF00111 2Fe-2S iron-sulfur cluster binding domain FK178_12515 PF00175 Oxidoreductase NAD-binding domain FK178_12525 PF00005 ABC transporter FK178_12550 PF00119 ATP synthase A chain FK178_12555 PF00137 ATP synthase subunit C FK178_12560 PF00430 ATP synthase B/B' CF(0) FK178_12565 PF00213 ATP synthase delta (OSCP) subunit FK178_12570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FK178_12570 PF00306 ATP synthase alpha/beta chain, C terminal domain FK178_12570 PF02874 ATP synthase alpha/beta family, beta-barrel domain FK178_12575 PF00231 ATP synthase FK178_12590 PF00692 dUTPase FK178_12595 PF00483 Nucleotidyl transferase FK178_12595 PF00132 Bacterial transferase hexapeptide (six repeats) FK178_12615 PF03061 Thioesterase superfamily FK178_12625 PF02481 DNA recombination-mediator protein A FK178_12625 PF17782 DprA winged helix domain FK178_12630 PF00579 tRNA synthetases class I (W and Y) FK178_12655 PF00154 recA bacterial DNA recombination protein FK178_12660 PF17773 UPF0176 acylphosphatase like domain FK178_12660 PF00581 Rhodanese-like domain FK178_12660 PF12368 Rhodanase C-terminal FK178_12665 PF04468 PSP1 C-terminal conserved region FK178_12670 PF14109 GldH lipoprotein FK178_12675 PF00912 Transglycosylase FK178_12675 PF00905 Penicillin binding protein transpeptidase domain FK178_12680 PF01144 Coenzyme A transferase FK178_12685 PF01144 Coenzyme A transferase FK178_12690 PF00291 Pyridoxal-phosphate dependent enzyme FK178_12700 PF00149 Calcineurin-like phosphoesterase FK178_12710 PF00106 short chain dehydrogenase FK178_12720 PF17863 AAA lid domain FK178_12720 PF07726 ATPase family associated with various cellular activities (AAA) FK178_12725 PF01882 Protein of unknown function DUF58 FK178_12735 PF07584 Aerotolerance regulator N-terminal FK178_12735 PF13519 von Willebrand factor type A domain FK178_12740 PF13519 von Willebrand factor type A domain FK178_12740 PF07584 Aerotolerance regulator N-terminal FK178_12770 PF00484 Carbonic anhydrase FK178_12785 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FK178_12785 PF01409 tRNA synthetases class II core domain (F) FK178_12795 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FK178_12795 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FK178_12800 PF04972 BON domain FK178_12800 PF01476 LysM domain FK178_12805 PF01467 Cytidylyltransferase-like FK178_12810 PF00625 Guanylate kinase FK178_12815 PF03755 YicC-like family, N-terminal region FK178_12815 PF08340 Domain of unknown function (DUF1732) FK178_12825 PF00561 alpha/beta hydrolase fold FK178_12835 PF00892 EamA-like transporter family FK178_12840 PF03960 ArsC family FK178_12850 PF01053 Cys/Met metabolism PLP-dependent enzyme FK178_12860 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FK178_12860 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FK178_12865 PF11967 Recombination protein O N terminal FK178_12865 PF02565 Recombination protein O C terminal FK178_12875 PF08264 Anticodon-binding domain of tRNA FK178_12875 PF00133 tRNA synthetases class I (I, L, M and V) FK178_12890 PF01252 Signal peptidase (SPase) II FK178_12895 PF00072 Response regulator receiver domain FK178_12895 PF04397 LytTr DNA-binding domain FK178_12905 PF01812 5-formyltetrahydrofolate cyclo-ligase family FK178_12915 PF18030 RimK PreATP-grasp domain FK178_12915 PF08443 RimK-like ATP-grasp domain FK178_12925 PF01541 GIY-YIG catalytic domain FK178_12925 PF02151 UvrB/uvrC motif FK178_12925 PF08459 UvrC Helix-hairpin-helix N-terminal FK178_12930 PF00027 Cyclic nucleotide-binding domain FK178_12930 PF01734 Patatin-like phospholipase FK178_12935 PF04209 homogentisate 1,2-dioxygenase FK178_12940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FK178_12950 PF03301 Tryptophan 2,3-dioxygenase FK178_12955 PF01551 Peptidase family M23 FK178_12955 PF08460 Bacterial SH3 domain FK178_12960 PF00342 Phosphoglucose isomerase FK178_12965 PF00593 TonB dependent receptor FK178_12975 PF01966 HD domain FK178_12990 PF06491 Disulphide isomerase FK178_13000 PF00226 DnaJ domain FK178_13000 PF01556 DnaJ C terminal domain FK178_13000 PF00684 DnaJ central domain FK178_13005 PF00593 TonB dependent receptor FK178_13005 PF07715 TonB-dependent Receptor Plug Domain FK178_13010 PF02742 Iron dependent repressor, metal binding and dimerisation domain FK178_13010 PF00950 ABC 3 transport family FK178_13015 PF02535 ZIP Zinc transporter FK178_13030 PF07670 Nucleoside recognition FK178_13030 PF07664 Ferrous iron transport protein B C terminus FK178_13030 PF02421 Ferrous iron transport protein B FK178_13040 PF02630 SCO1/SenC FK178_13045 PF02163 Peptidase family M50 FK178_13045 PF17820 PDZ domain FK178_13060 PF01661 Macro domain FK178_13065 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FK178_13065 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FK178_13065 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FK178_13070 PF00857 Isochorismatase family FK178_13075 PF00266 Aminotransferase class-V FK178_13120 PF00664 ABC transporter transmembrane region FK178_13120 PF00005 ABC transporter FK178_13145 PF00356 Bacterial regulatory proteins, lacI family FK178_13175 PF00722 Glycosyl hydrolases family 16 FK178_13190 PF14310 Fibronectin type III-like domain FK178_13190 PF00933 Glycosyl hydrolase family 3 N terminal domain FK178_13190 PF01915 Glycosyl hydrolase family 3 C-terminal domain FK178_13195 PF14310 Fibronectin type III-like domain FK178_13195 PF00933 Glycosyl hydrolase family 3 N terminal domain FK178_13195 PF01915 Glycosyl hydrolase family 3 C-terminal domain FK178_13200 PF00722 Glycosyl hydrolases family 16 FK178_13205 PF00083 Sugar (and other) transporter FK178_13210 PF14437 MafB19-like deaminase FK178_13215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FK178_13215 PF02779 Transketolase, pyrimidine binding domain FK178_13215 PF02780 Transketolase, C-terminal domain FK178_13225 PF01966 HD domain FK178_13225 PF13286 Phosphohydrolase-associated domain FK178_13235 PF03477 ATP cone domain FK178_13235 PF00317 Ribonucleotide reductase, all-alpha domain FK178_13235 PF02867 Ribonucleotide reductase, barrel domain FK178_13265 PF01914 MarC family integral membrane protein FK178_13275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_13285 PF01471 Putative peptidoglycan binding domain FK178_13285 PF03572 Peptidase family S41 FK178_13285 PF13180 PDZ domain FK178_13345 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FK178_13345 PF09297 NADH pyrophosphatase zinc ribbon domain FK178_13345 PF00293 NUDIX domain FK178_13355 PF04011 LemA family FK178_13360 PF01435 Peptidase family M48 FK178_13370 PF02690 Na+/Pi-cotransporter FK178_13400 PF13193 AMP-binding enzyme C-terminal domain FK178_13400 PF00501 AMP-binding enzyme FK178_13410 PF01541 GIY-YIG catalytic domain FK178_13425 PF07690 Major Facilitator Superfamily FK178_13440 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK178_13445 PF00005 ABC transporter FK178_13450 PF00005 ABC transporter FK178_13460 PF00005 ABC transporter FK178_13480 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FK178_13480 PF14572 Phosphoribosyl synthetase-associated domain FK178_13485 PF01386 Ribosomal L25p family FK178_13485 PF14693 Ribosomal protein TL5, C-terminal domain FK178_13490 PF01195 Peptidyl-tRNA hydrolase FK178_13495 PF01687 Riboflavin kinase FK178_13495 PF06574 FAD synthetase FK178_13505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FK178_13505 PF02403 Seryl-tRNA synthetase N-terminal domain FK178_13525 PF00398 Ribosomal RNA adenine dimethylase FK178_13530 PF01769 Divalent cation transporter FK178_13530 PF00571 CBS domain FK178_13530 PF03448 MgtE intracellular N domain FK178_13540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FK178_13540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FK178_13545 PF01541 GIY-YIG catalytic domain FK178_13550 PF09962 Uncharacterized conserved protein (DUF2196) FK178_13565 PF00696 Amino acid kinase family FK178_13565 PF01842 ACT domain FK178_13580 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FK178_13595 PF04675 DNA ligase N terminus FK178_13595 PF01068 ATP dependent DNA ligase domain FK178_13595 PF04679 ATP dependent DNA ligase C terminal region FK178_13600 PF00271 Helicase conserved C-terminal domain FK178_13600 PF08494 DEAD/H associated FK178_13600 PF00270 DEAD/DEAH box helicase FK178_13615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FK178_13630 PF00270 DEAD/DEAH box helicase FK178_13630 PF17757 UvrB interaction domain FK178_13630 PF03461 TRCF domain FK178_13630 PF02559 CarD-like/TRCF domain FK178_13630 PF00271 Helicase conserved C-terminal domain FK178_13640 PF02021 Uncharacterised protein family UPF0102 FK178_13650 PF08264 Anticodon-binding domain of tRNA FK178_13650 PF09334 tRNA synthetases class I (M) FK178_13650 PF01588 Putative tRNA binding domain FK178_13655 PF01541 GIY-YIG catalytic domain FK178_13660 PF00850 Histone deacetylase domain FK178_13665 PF00436 Single-strand binding protein family FK178_13670 PF00690 Cation transporter/ATPase, N-terminus FK178_13670 PF00689 Cation transporting ATPase, C-terminus FK178_13685 PF00582 Universal stress protein family FK178_13685 PF00999 Sodium/hydrogen exchanger family FK178_13695 PF00571 CBS domain FK178_13710 PF05649 Peptidase family M13 FK178_13710 PF01431 Peptidase family M13 FK178_13725 PF01370 NAD dependent epimerase/dehydratase family FK178_13730 PF00313 'Cold-shock' DNA-binding domain FK178_13740 PF00654 Voltage gated chloride channel FK178_13745 PF00152 tRNA synthetases class II (D, K and N) FK178_13745 PF01336 OB-fold nucleic acid binding domain FK178_13745 PF02938 GAD domain FK178_13755 PF00873 AcrB/AcrD/AcrF family FK178_13760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FK178_13760 PF00529 HlyD membrane-fusion protein of T1SS FK178_13765 PF02321 Outer membrane efflux protein FK178_13775 PF00348 Polyprenyl synthetase FK178_13785 PF00676 Dehydrogenase E1 component FK178_13785 PF16870 2-oxoglutarate dehydrogenase C-terminal FK178_13785 PF02779 Transketolase, pyrimidine binding domain FK178_13785 PF16078 2-oxoglutarate dehydrogenase N-terminus FK178_13790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FK178_13790 PF00364 Biotin-requiring enzyme FK178_13790 PF02817 e3 binding domain FK178_13805 PF01026 TatD related DNase FK178_13815 PF17763 Glutaminase/Asparaginase C-terminal domain FK178_13815 PF00710 Asparaginase, N-terminal FK178_13825 PF01618 MotA/TolQ/ExbB proton channel family FK178_13855 PF04552 Sigma-54, DNA binding domain FK178_13855 PF00309 Sigma-54 factor, Activator interacting domain (AID) FK178_13855 PF04963 Sigma-54 factor, core binding domain FK178_13860 PF01479 S4 domain FK178_13860 PF00849 RNA pseudouridylate synthase FK178_13865 PF01336 OB-fold nucleic acid binding domain FK178_13865 PF00152 tRNA synthetases class II (D, K and N) FK178_13880 PF01765 Ribosome recycling factor FK178_13885 PF00696 Amino acid kinase family FK178_13890 PF04298 Putative neutral zinc metallopeptidase FK178_13905 PF01037 Lrp/AsnC ligand binding domain FK178_13905 PF13404 AsnC-type helix-turn-helix domain FK178_13920 PF01293 Phosphoenolpyruvate carboxykinase FK178_13935 PF00535 Glycosyl transferase family 2 FK178_13940 PF01979 Amidohydrolase family FK178_13950 PF16363 GDP-mannose 4,6 dehydratase FK178_13955 PF00579 tRNA synthetases class I (W and Y) FK178_13975 PF07715 TonB-dependent Receptor Plug Domain FK178_13975 PF00593 TonB dependent receptor FK178_13980 PF00072 Response regulator receiver domain FK178_13980 PF00486 Transcriptional regulatory protein, C terminal FK178_13985 PF00989 PAS fold FK178_13985 PF16736 Single Cache-like FK178_13985 PF00512 His Kinase A (phospho-acceptor) domain FK178_13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_13990 PF03033 Glycosyltransferase family 28 N-terminal domain FK178_13990 PF04101 Glycosyltransferase family 28 C-terminal domain FK178_13995 PF02390 Putative methyltransferase FK178_14005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FK178_14010 PF01883 Iron-sulfur cluster assembly protein FK178_14010 PF10609 NUBPL iron-transfer P-loop NTPase FK178_14015 PF01106 NifU-like domain FK178_14015 PF01521 Iron-sulphur cluster biosynthesis FK178_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FK178_14025 PF00111 2Fe-2S iron-sulfur cluster binding domain FK178_14040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FK178_14040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FK178_14040 PF02770 Acyl-CoA dehydrogenase, middle domain FK178_14050 PF05175 Methyltransferase small domain FK178_14055 PF01782 RimM N-terminal domain FK178_14055 PF05239 PRC-barrel domain FK178_14060 PF00886 Ribosomal protein S16 FK178_14070 PF07733 Bacterial DNA polymerase III alpha NTPase domain FK178_14070 PF14579 Helix-hairpin-helix motif FK178_14070 PF01336 OB-fold nucleic acid binding domain FK178_14070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FK178_14070 PF02811 PHP domain FK178_14075 PF00085 Thioredoxin FK178_14090 PF02868 Thermolysin metallopeptidase, alpha-helical domain FK178_14090 PF01447 Thermolysin metallopeptidase, catalytic domain FK178_14090 PF03413 Peptidase propeptide and YPEB domain FK178_14110 PF00296 Luciferase-like monooxygenase FK178_14125 PF00939 Sodium:sulfate symporter transmembrane region FK178_14130 PF01244 Membrane dipeptidase (Peptidase family M19) FK178_14135 PF01979 Amidohydrolase family FK178_14135 PF13382 Adenine deaminase C-terminal domain FK178_14150 PF00436 Single-strand binding protein family FK178_14170 PF05569 BlaR1 peptidase M56 FK178_14170 PF00905 Penicillin binding protein transpeptidase domain FK178_14205 PF00535 Glycosyl transferase family 2 FK178_14210 PF02075 Crossover junction endodeoxyribonuclease RuvC FK178_14220 PF04055 Radical SAM superfamily FK178_14220 PF06969 HemN C-terminal domain FK178_14235 PF00889 Elongation factor TS FK178_14240 PF00318 Ribosomal protein S2 FK178_14245 PF00380 Ribosomal protein S9/S16 FK178_14250 PF00572 Ribosomal protein L13 FK178_14265 PF07715 TonB-dependent Receptor Plug Domain FK178_14265 PF00593 TonB dependent receptor FK178_14275 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FK178_14275 PF00476 DNA polymerase family A FK178_14275 PF01612 3'-5' exonuclease FK178_14275 PF01367 5'-3' exonuclease, C-terminal SAM fold FK178_14285 PF00085 Thioredoxin FK178_14290 PF01522 Polysaccharide deacetylase FK178_14305 PF01225 Mur ligase family, catalytic domain FK178_14305 PF08245 Mur ligase middle domain FK178_14305 PF02875 Mur ligase family, glutamate ligase domain FK178_14310 PF03781 Sulfatase-modifying factor enzyme 1 FK178_14320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FK178_14325 PF00676 Dehydrogenase E1 component FK178_14330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FK178_14330 PF02817 e3 binding domain FK178_14330 PF00364 Biotin-requiring enzyme FK178_14335 PF04151 Bacterial pre-peptidase C-terminal domain FK178_14335 PF04389 Peptidase family M28 FK178_14350 PF00483 Nucleotidyl transferase FK178_14350 PF01050 Mannose-6-phosphate isomerase FK178_14360 PF00005 ABC transporter FK178_14365 PF02405 Permease MlaE FK178_14370 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase FK178_14375 PF00535 Glycosyl transferase family 2 FK178_14385 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FK178_14385 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FK178_14390 PF02347 Glycine cleavage system P-protein FK178_14410 PF01432 Peptidase family M3 FK178_14415 PF00731 AIR carboxylase FK178_14430 PF01926 50S ribosome-binding GTPase FK178_14430 PF01018 GTP1/OBG FK178_14440 PF00223 Photosystem I psaA/psaB protein FK178_14440 PF00691 OmpA family FK178_14460 PF02875 Mur ligase family, glutamate ligase domain FK178_14460 PF01225 Mur ligase family, catalytic domain FK178_14460 PF08245 Mur ligase middle domain FK178_14465 PF04002 RadC-like JAB domain FK178_14495 PF00004 ATPase family associated with various cellular activities (AAA) FK178_14495 PF16193 AAA C-terminal domain FK178_14495 PF12002 MgsA AAA+ ATPase C terminal FK178_14500 PF01694 Rhomboid family FK178_14505 PF08032 RNA 2'-O ribose methyltransferase substrate binding FK178_14505 PF00588 SpoU rRNA Methylase family FK178_14515 PF07715 TonB-dependent Receptor Plug Domain FK178_14515 PF00593 TonB dependent receptor FK178_14520 PF00164 Ribosomal protein S12/S23 FK178_14525 PF00177 Ribosomal protein S7p/S5e FK178_14530 PF00679 Elongation factor G C-terminus FK178_14530 PF00009 Elongation factor Tu GTP binding domain FK178_14530 PF03764 Elongation factor G, domain IV FK178_14530 PF03144 Elongation factor Tu domain 2 FK178_14530 PF14492 Elongation Factor G, domain II FK178_14535 PF00338 Ribosomal protein S10p/S20e FK178_14540 PF00297 Ribosomal protein L3 FK178_14545 PF00573 Ribosomal protein L4/L1 family FK178_14550 PF00276 Ribosomal protein L23 FK178_14555 PF03947 Ribosomal Proteins L2, C-terminal domain FK178_14555 PF00181 Ribosomal Proteins L2, RNA binding domain FK178_14560 PF00203 Ribosomal protein S19 FK178_14565 PF00237 Ribosomal protein L22p/L17e FK178_14570 PF07650 KH domain FK178_14570 PF00189 Ribosomal protein S3, C-terminal domain FK178_14575 PF00252 Ribosomal protein L16p/L10e FK178_14580 PF00831 Ribosomal L29 protein FK178_14585 PF00366 Ribosomal protein S17 FK178_14590 PF00238 Ribosomal protein L14p/L23e FK178_14595 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FK178_14595 PF00467 KOW motif FK178_14600 PF00281 Ribosomal protein L5 FK178_14600 PF00673 ribosomal L5P family C-terminus FK178_14605 PF00253 Ribosomal protein S14p/S29e FK178_14610 PF00410 Ribosomal protein S8 FK178_14615 PF00347 Ribosomal protein L6 FK178_14620 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FK178_14625 PF00333 Ribosomal protein S5, N-terminal domain FK178_14625 PF03719 Ribosomal protein S5, C-terminal domain FK178_14630 PF00327 Ribosomal protein L30p/L7e FK178_14635 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FK178_14640 PF00344 SecY translocase FK178_14645 PF01176 Translation initiation factor 1A / IF-1 FK178_14650 PF00444 Ribosomal protein L36 FK178_14655 PF00416 Ribosomal protein S13/S18 FK178_14660 PF00411 Ribosomal protein S11 FK178_14665 PF01479 S4 domain FK178_14665 PF00163 Ribosomal protein S4/S9 N-terminal domain FK178_14670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FK178_14670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FK178_14670 PF01000 RNA polymerase Rpb3/RpoA insert domain FK178_14675 PF01196 Ribosomal protein L17 FK178_14680 PF00117 Glutamine amidotransferase class-I FK178_14680 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FK178_14700 PF03952 Enolase, N-terminal domain FK178_14700 PF00113 Enolase, C-terminal TIM barrel domain FK178_14705 PF00285 Citrate synthase, C-terminal domain FK178_14710 PF03425 Carbohydrate binding domain (family 11) FK178_14710 PF00150 Cellulase (glycosyl hydrolase family 5) FK178_14710 PF00404 Dockerin type I domain FK178_14710 PF02156 Glycosyl hydrolase family 26 FK178_14715 PF00703 Glycosyl hydrolases family 2 FK178_14715 PF16355 Domain of unknown function (DUF4982) FK178_14715 PF02837 Glycosyl hydrolases family 2, sugar binding domain FK178_14715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FK178_14730 PF01370 NAD dependent epimerase/dehydratase family FK178_14730 PF08338 Domain of unknown function (DUF1731) FK178_14745 PF03485 Arginyl tRNA synthetase N terminal domain FK178_14745 PF05746 DALR anticodon binding domain FK178_14745 PF00750 tRNA synthetases class I (R) FK178_14755 PF00448 SRP54-type protein, GTPase domain FK178_14755 PF02881 SRP54-type protein, helical bundle domain FK178_14755 PF02978 Signal peptide binding domain FK178_14760 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FK178_14760 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FK178_14780 PF00849 RNA pseudouridylate synthase FK178_14780 PF01479 S4 domain FK178_14800 PF17676 LD-carboxypeptidase C-terminal domain FK178_14800 PF02016 LD-carboxypeptidase N-terminal domain FK178_14805 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FK178_14810 PF07715 TonB-dependent Receptor Plug Domain FK178_14810 PF00593 TonB dependent receptor FK178_14825 PF04055 Radical SAM superfamily FK178_14835 PF13537 Glutamine amidotransferase domain FK178_14835 PF00733 Asparagine synthase FK178_14840 PF01751 Toprim domain FK178_14840 PF00204 DNA gyrase B FK178_14840 PF00986 DNA gyrase B subunit, carboxyl terminus FK178_14840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_14850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FK178_14850 PF00056 lactate/malate dehydrogenase, NAD binding domain FK178_14855 PF07549 SecD/SecF GG Motif FK178_14855 PF02355 Protein export membrane protein FK178_14865 PF01790 Prolipoprotein diacylglyceryl transferase FK178_14870 PF01809 Putative membrane protein insertion efficiency factor FK178_14875 PF09190 DALR domain FK178_14875 PF01406 tRNA synthetases class I (C) catalytic domain FK178_14880 PF01227 GTP cyclohydrolase I FK178_14905 PF09180 Prolyl-tRNA synthetase, C-terminal FK178_14905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FK178_14905 PF03129 Anticodon binding domain FK178_14920 PF01649 Ribosomal protein S20 FK178_14925 PF01926 50S ribosome-binding GTPase FK178_14930 PF00561 alpha/beta hydrolase fold FK178_14935 PF02381 MraZ protein, putative antitoxin-like FK178_14940 PF01795 MraW methylase family FK178_14950 PF03717 Penicillin-binding Protein dimerisation domain FK178_14950 PF00905 Penicillin binding protein transpeptidase domain FK178_14955 PF02875 Mur ligase family, glutamate ligase domain FK178_14955 PF01225 Mur ligase family, catalytic domain FK178_14955 PF08245 Mur ligase middle domain FK178_14960 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FK178_14960 PF00953 Glycosyl transferase family 4 FK178_14965 PF08245 Mur ligase middle domain FK178_14965 PF02875 Mur ligase family, glutamate ligase domain FK178_14970 PF01098 Cell cycle protein FK178_14975 PF03033 Glycosyltransferase family 28 N-terminal domain FK178_14975 PF04101 Glycosyltransferase family 28 C-terminal domain FK178_14980 PF08245 Mur ligase middle domain FK178_14980 PF01225 Mur ligase family, catalytic domain FK178_14980 PF02875 Mur ligase family, glutamate ligase domain FK178_14990 PF02491 SHS2 domain inserted in FTSA FK178_14995 PF12327 FtsZ family, C-terminal domain FK178_14995 PF00091 Tubulin/FtsZ family, GTPase domain FK178_15000 PF09424 Yqey-like protein FK178_15010 PF00589 Phage integrase family FK178_15010 PF02899 Phage integrase, N-terminal SAM-like domain FK178_15045 PF00072 Response regulator receiver domain FK178_15045 PF04397 LytTr DNA-binding domain FK178_15050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_15050 PF07730 Histidine kinase FK178_15120 PF04151 Bacterial pre-peptidase C-terminal domain FK178_15120 PF05922 Peptidase inhibitor I9 FK178_15120 PF00082 Subtilase family FK178_15135 PF07730 Histidine kinase FK178_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_15140 PF00196 Bacterial regulatory proteins, luxR family FK178_15140 PF00072 Response regulator receiver domain FK178_15150 PF05661 Protein of unknown function (DUF808) FK178_15175 PF00072 Response regulator receiver domain FK178_15175 PF04397 LytTr DNA-binding domain FK178_15180 PF07694 5TMR of 5TMR-LYT FK178_15180 PF13492 GAF domain FK178_15180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_15180 PF06580 Histidine kinase FK178_15195 PF01979 Amidohydrolase family FK178_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_15200 PF09308 LuxQ, periplasmic FK178_15200 PF00072 Response regulator receiver domain FK178_15200 PF00512 His Kinase A (phospho-acceptor) domain FK178_15205 PF04397 LytTr DNA-binding domain FK178_15205 PF00072 Response regulator receiver domain FK178_15210 PF07694 5TMR of 5TMR-LYT FK178_15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FK178_15210 PF06580 Histidine kinase FK178_15220 PF00398 Ribosomal RNA adenine dimethylase FK178_15235 PF11867 Domain of unknown function (DUF3387) FK178_15235 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FK178_15235 PF18766 SWI2/SNF2 ATPase FK178_15240 PF01420 Type I restriction modification DNA specificity domain FK178_15285 PF02384 N-6 DNA Methylase FK178_15305 PF13087 AAA domain FK178_15305 PF13195 Protein of unknown function (DUF4011) FK178_15305 PF13086 AAA domain FK178_15305 PF13086 AAA domain FK178_15305 PF13087 AAA domain FK178_15305 PF13195 Protein of unknown function (DUF4011) FK178_15315 PF00593 TonB dependent receptor FK178_15315 PF07715 TonB-dependent Receptor Plug Domain FK178_15330 PF00221 Aromatic amino acid lyase FK178_15335 PF17391 Urocanase N-terminal domain FK178_15335 PF17392 Urocanase C-terminal domain FK178_15335 PF01175 Urocanase Rossmann-like domain FK178_15340 PF02447 GntP family permease FK178_15345 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FK178_15345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FK178_15365 PF01037 Lrp/AsnC ligand binding domain FK178_15380 PF07730 Histidine kinase FK178_15380 PF00672 HAMP domain FK178_15380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase