locus-tag class description GYM72_00020 PF00106 short chain dehydrogenase GYM72_00025 PF08501 Shikimate dehydrogenase substrate binding domain GYM72_00030 PF02618 YceG-like family GYM72_00040 PF00849 RNA pseudouridylate synthase GYM72_00040 PF01479 S4 domain GYM72_00055 PF00118 TCP-1/cpn60 chaperonin family GYM72_00060 PF00166 Chaperonin 10 Kd subunit GYM72_00075 PF03883 Peroxide stress protein YaaA GYM72_00080 PF01458 Uncharacterized protein family (UPF0051) GYM72_00085 PF00005 ABC transporter GYM72_00105 PF01168 Alanine racemase, N-terminal domain GYM72_00105 PF00842 Alanine racemase, C-terminal domain GYM72_00110 PF00265 Thymidine kinase GYM72_00120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GYM72_00125 PF02082 Transcriptional regulator GYM72_00140 PF02384 N-6 DNA Methylase GYM72_00170 PF12146 Serine aminopeptidase, S33 GYM72_00185 PF00330 Aconitase family (aconitate hydratase) GYM72_00185 PF00694 Aconitase C-terminal domain GYM72_00190 PF00005 ABC transporter GYM72_00190 PF17755 UvrA DNA-binding domain GYM72_00190 PF17760 UvrA interaction domain GYM72_00195 PF07411 Domain of unknown function (DUF1508) GYM72_00200 PF01596 O-methyltransferase GYM72_00205 PF00877 NlpC/P60 family GYM72_00210 PF01351 Ribonuclease HII GYM72_00215 PF01040 UbiA prenyltransferase family GYM72_00220 PF04030 D-arabinono-1,4-lactone oxidase GYM72_00220 PF01565 FAD binding domain GYM72_00230 PF00106 short chain dehydrogenase GYM72_00255 PF00579 tRNA synthetases class I (W and Y) GYM72_00260 PF10437 Bacterial lipoate protein ligase C-terminus GYM72_00260 PF03099 Biotin/lipoate A/B protein ligase family GYM72_00265 PF01040 UbiA prenyltransferase family GYM72_00275 PF00075 RNase H GYM72_00280 PF00877 NlpC/P60 family GYM72_00285 PF00005 ABC transporter GYM72_00285 PF12848 ABC transporter GYM72_00290 PF01668 SmpB protein GYM72_00295 PF00691 OmpA family GYM72_00295 PF01389 OmpA-like transmembrane domain GYM72_00300 PF01389 OmpA-like transmembrane domain GYM72_00300 PF00691 OmpA family GYM72_00305 PF02348 Cytidylyltransferase GYM72_00310 PF00465 Iron-containing alcohol dehydrogenase GYM72_00330 PF00939 Sodium:sulfate symporter transmembrane region GYM72_00335 PF01938 TRAM domain GYM72_00335 PF00919 Uncharacterized protein family UPF0004 GYM72_00335 PF04055 Radical SAM superfamily GYM72_00340 PF02954 Bacterial regulatory protein, Fis family GYM72_00340 PF00072 Response regulator receiver domain GYM72_00340 PF00158 Sigma-54 interaction domain GYM72_00360 PF01029 NusB family GYM72_00380 PF02565 Recombination protein O C terminal GYM72_00380 PF11967 Recombination protein O N terminal GYM72_00395 PF00572 Ribosomal protein L13 GYM72_00400 PF00380 Ribosomal protein S9/S16 GYM72_00405 PF00318 Ribosomal protein S2 GYM72_00410 PF00889 Elongation factor TS GYM72_00420 PF01566 Natural resistance-associated macrophage protein GYM72_00425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GYM72_00425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GYM72_00435 PF08534 Redoxin GYM72_00440 PF01116 Fructose-bisphosphate aldolase class-II GYM72_00450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GYM72_00450 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_00455 PF08267 Cobalamin-independent synthase, N-terminal domain GYM72_00455 PF01717 Cobalamin-independent synthase, Catalytic domain GYM72_00465 PF01557 Fumarylacetoacetate (FAA) hydrolase family GYM72_00470 PF00929 Exonuclease GYM72_00475 PF01066 CDP-alcohol phosphatidyltransferase GYM72_00485 PF02576 RimP N-terminal domain GYM72_00490 PF08529 NusA N-terminal domain GYM72_00490 PF00575 S1 RNA binding domain GYM72_00490 PF13184 NusA-like KH domain GYM72_00495 PF00009 Elongation factor Tu GTP binding domain GYM72_00495 PF11987 Translation-initiation factor 2 GYM72_00495 PF04760 Translation initiation factor IF-2, N-terminal region GYM72_00500 PF07715 TonB-dependent Receptor Plug Domain GYM72_00500 PF00593 TonB dependent receptor GYM72_00505 PF14322 Starch-binding associating with outer membrane GYM72_00505 PF07980 SusD family GYM72_00530 PF00154 recA bacterial DNA recombination protein GYM72_00540 PF04898 Glutamate synthase central domain GYM72_00540 PF01493 GXGXG motif GYM72_00540 PF01645 Conserved region in glutamate synthase GYM72_00540 PF00310 Glutamine amidotransferases class-II GYM72_00545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GYM72_00545 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_00550 PF00892 EamA-like transporter family GYM72_00560 PF04055 Radical SAM superfamily GYM72_00565 PF02547 Queuosine biosynthesis protein GYM72_00575 PF00625 Guanylate kinase GYM72_00580 PF03755 YicC-like family, N-terminal region GYM72_00580 PF08340 Domain of unknown function (DUF1732) GYM72_00590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GYM72_00590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GYM72_00600 PF01209 ubiE/COQ5 methyltransferase family GYM72_00620 PF00013 KH domain GYM72_00620 PF12072 Domain of unknown function (DUF3552) GYM72_00620 PF01966 HD domain GYM72_00625 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GYM72_00630 PF00677 Lumazine binding domain GYM72_00640 PF00004 ATPase family associated with various cellular activities (AAA) GYM72_00640 PF07724 AAA domain (Cdc48 subfamily) GYM72_00640 PF17871 AAA lid domain GYM72_00640 PF02861 Clp amino terminal domain, pathogenicity island component GYM72_00640 PF10431 C-terminal, D2-small domain, of ClpB protein GYM72_00675 PF05188 MutS domain II GYM72_00675 PF00488 MutS domain V GYM72_00675 PF05190 MutS family domain IV GYM72_00675 PF01624 MutS domain I GYM72_00675 PF05192 MutS domain III GYM72_00680 PF00004 ATPase family associated with various cellular activities (AAA) GYM72_00680 PF05362 Lon protease (S16) C-terminal proteolytic domain GYM72_00680 PF02190 ATP-dependent protease La (LON) substrate-binding domain GYM72_00695 PF01242 6-pyruvoyl tetrahydropterin synthase GYM72_00700 PF00149 Calcineurin-like phosphoesterase GYM72_00705 PF03061 Thioesterase superfamily GYM72_00720 PF06421 GTP-binding protein LepA C-terminus GYM72_00720 PF03144 Elongation factor Tu domain 2 GYM72_00720 PF00009 Elongation factor Tu GTP binding domain GYM72_00720 PF00679 Elongation factor G C-terminus GYM72_00725 PF03601 Conserved hypothetical protein 698 GYM72_00730 PF00484 Carbonic anhydrase GYM72_00740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GYM72_00740 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GYM72_00740 PF02142 MGS-like domain GYM72_00745 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GYM72_00745 PF00117 Glutamine amidotransferase class-I GYM72_00750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GYM72_00750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GYM72_00765 PF00884 Sulfatase GYM72_00780 PF00550 Phosphopantetheine attachment site GYM72_00785 PF00109 Beta-ketoacyl synthase, N-terminal domain GYM72_00785 PF02801 Beta-ketoacyl synthase, C-terminal domain GYM72_00790 PF00035 Double-stranded RNA binding motif GYM72_00790 PF14622 Ribonuclease-III-like GYM72_00800 PF00224 Pyruvate kinase, barrel domain GYM72_00800 PF02887 Pyruvate kinase, alpha/beta domain GYM72_00810 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GYM72_00810 PF04101 Glycosyltransferase family 28 C-terminal domain GYM72_00815 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase GYM72_00820 PF00561 alpha/beta hydrolase fold GYM72_00830 PF00550 Phosphopantetheine attachment site GYM72_00830 PF14765 Polyketide synthase dehydratase GYM72_00830 PF02801 Beta-ketoacyl synthase, C-terminal domain GYM72_00830 PF00109 Beta-ketoacyl synthase, N-terminal domain GYM72_00830 PF08659 KR domain GYM72_00830 PF08240 Alcohol dehydrogenase GroES-like domain GYM72_00830 PF16197 Ketoacyl-synthetase C-terminal extension GYM72_00830 PF00698 Acyl transferase domain GYM72_00835 PF14765 Polyketide synthase dehydratase GYM72_00835 PF00698 Acyl transferase domain GYM72_00835 PF08240 Alcohol dehydrogenase GroES-like domain GYM72_00835 PF16197 Ketoacyl-synthetase C-terminal extension GYM72_00835 PF00109 Beta-ketoacyl synthase, N-terminal domain GYM72_00835 PF02801 Beta-ketoacyl synthase, C-terminal domain GYM72_00835 PF08659 KR domain GYM72_00835 PF00550 Phosphopantetheine attachment site GYM72_00840 PF01554 MatE GYM72_00845 PF00072 Response regulator receiver domain GYM72_00845 PF00486 Transcriptional regulatory protein, C terminal GYM72_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_00850 PF00512 His Kinase A (phospho-acceptor) domain GYM72_00855 PF00749 tRNA synthetases class I (E and Q), catalytic domain GYM72_00855 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GYM72_00885 PF02527 rRNA small subunit methyltransferase G GYM72_00890 PF16921 Tex protein YqgF-like domain GYM72_00890 PF17674 HHH domain GYM72_00890 PF00575 S1 RNA binding domain GYM72_00890 PF09371 Tex-like protein N-terminal domain GYM72_00900 PF09424 Yqey-like protein GYM72_00905 PF12327 FtsZ family, C-terminal domain GYM72_00905 PF00091 Tubulin/FtsZ family, GTPase domain GYM72_00910 PF02491 SHS2 domain inserted in FTSA GYM72_00920 PF01225 Mur ligase family, catalytic domain GYM72_00920 PF02875 Mur ligase family, glutamate ligase domain GYM72_00920 PF08245 Mur ligase middle domain GYM72_00925 PF04101 Glycosyltransferase family 28 C-terminal domain GYM72_00925 PF03033 Glycosyltransferase family 28 N-terminal domain GYM72_00930 PF01098 Cell cycle protein GYM72_00935 PF02875 Mur ligase family, glutamate ligase domain GYM72_00935 PF08245 Mur ligase middle domain GYM72_00940 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GYM72_00940 PF00953 Glycosyl transferase family 4 GYM72_00945 PF08245 Mur ligase middle domain GYM72_00945 PF02875 Mur ligase family, glutamate ligase domain GYM72_00945 PF01225 Mur ligase family, catalytic domain GYM72_00950 PF03717 Penicillin-binding Protein dimerisation domain GYM72_00950 PF00905 Penicillin binding protein transpeptidase domain GYM72_00960 PF01795 MraW methylase family GYM72_00965 PF02381 MraZ protein, putative antitoxin-like GYM72_00970 PF12697 Alpha/beta hydrolase family GYM72_00975 PF01926 50S ribosome-binding GTPase GYM72_00980 PF00588 SpoU rRNA Methylase family GYM72_00980 PF08032 RNA 2'-O ribose methyltransferase substrate binding GYM72_01000 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GYM72_01000 PF01138 3' exoribonuclease family, domain 1 GYM72_01000 PF00575 S1 RNA binding domain GYM72_01000 PF00013 KH domain GYM72_01000 PF03725 3' exoribonuclease family, domain 2 GYM72_01005 PF00312 Ribosomal protein S15 GYM72_01015 PF12368 Rhodanase C-terminal GYM72_01015 PF17773 UPF0176 acylphosphatase like domain GYM72_01015 PF00581 Rhodanese-like domain GYM72_01020 PF01431 Peptidase family M13 GYM72_01020 PF05649 Peptidase family M13 GYM72_01025 PF00005 ABC transporter GYM72_01040 PF13439 Glycosyltransferase Family 4 GYM72_01040 PF00534 Glycosyl transferases group 1 GYM72_01050 PF00849 RNA pseudouridylate synthase GYM72_01050 PF01479 S4 domain GYM72_01055 PF02548 Ketopantoate hydroxymethyltransferase GYM72_01060 PF02673 Bacitracin resistance protein BacA GYM72_01070 PF18075 FtsX extracellular domain GYM72_01075 PF00398 Ribosomal RNA adenine dimethylase GYM72_01080 PF04945 YHS domain GYM72_01085 PF09561 HpaII restriction endonuclease GYM72_01090 PF00145 C-5 cytosine-specific DNA methylase GYM72_01095 PF01654 Cytochrome bd terminal oxidase subunit I GYM72_01105 PF12705 PD-(D/E)XK nuclease superfamily GYM72_01105 PF00580 UvrD/REP helicase N-terminal domain GYM72_01105 PF13361 UvrD-like helicase C-terminal domain GYM72_01115 PF02021 Uncharacterised protein family UPF0102 GYM72_01120 PF05175 Methyltransferase small domain GYM72_01125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_01125 PF00512 His Kinase A (phospho-acceptor) domain GYM72_01125 PF00672 HAMP domain GYM72_01135 PF00664 ABC transporter transmembrane region GYM72_01135 PF00005 ABC transporter GYM72_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GYM72_01150 PF03466 LysR substrate binding domain GYM72_01155 PF03601 Conserved hypothetical protein 698 GYM72_01160 PF00206 Lyase GYM72_01165 PF07687 Peptidase dimerisation domain GYM72_01165 PF01546 Peptidase family M20/M25/M40 GYM72_01170 PF00696 Amino acid kinase family GYM72_01175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GYM72_01175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GYM72_01180 PF00202 Aminotransferase class-III GYM72_01185 PF03807 NADP oxidoreductase coenzyme F420-dependent GYM72_01185 PF14748 Pyrroline-5-carboxylate reductase dimerisation GYM72_01190 PF01118 Semialdehyde dehydrogenase, NAD binding domain GYM72_01190 PF02774 Semialdehyde dehydrogenase, dimerisation domain GYM72_01195 PF00764 Arginosuccinate synthase GYM72_01215 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GYM72_01215 PF00925 GTP cyclohydrolase II GYM72_01230 PF01580 FtsK/SpoIIIE family GYM72_01230 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GYM72_01230 PF17854 FtsK alpha domain GYM72_01230 PF09397 Ftsk gamma domain GYM72_01235 PF01027 Inhibitor of apoptosis-promoting Bax1 GYM72_01240 PF02502 Ribose/Galactose Isomerase GYM72_01245 PF00749 tRNA synthetases class I (E and Q), catalytic domain GYM72_01255 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GYM72_01255 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GYM72_01260 PF10369 Small subunit of acetolactate synthase GYM72_01270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GYM72_01270 PF00205 Thiamine pyrophosphate enzyme, central domain GYM72_01270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GYM72_01275 PF00920 Dehydratase family GYM72_01280 PF00180 Isocitrate/isopropylmalate dehydrogenase GYM72_01285 PF00682 HMGL-like GYM72_01285 PF08502 LeuA allosteric (dimerisation) domain GYM72_01290 PF00694 Aconitase C-terminal domain GYM72_01295 PF00330 Aconitase family (aconitate hydratase) GYM72_01300 PF00682 HMGL-like GYM72_01300 PF08502 LeuA allosteric (dimerisation) domain GYM72_01305 PF00005 ABC transporter GYM72_01310 PF00348 Polyprenyl synthetase GYM72_01320 PF01026 TatD related DNase GYM72_01325 PF01757 Acyltransferase family GYM72_01330 PF01016 Ribosomal L27 protein GYM72_01335 PF00829 Ribosomal prokaryotic L21 protein GYM72_01340 PF00551 Formyl transferase GYM72_01340 PF02911 Formyl transferase, C-terminal domain GYM72_01360 PF02665 Nitrate reductase gamma subunit GYM72_01360 PF13183 4Fe-4S dicluster domain GYM72_01360 PF02754 Cysteine-rich domain GYM72_01365 PF02754 Cysteine-rich domain GYM72_01365 PF13183 4Fe-4S dicluster domain GYM72_01405 PF01497 Periplasmic binding protein GYM72_01410 PF00571 CBS domain GYM72_01410 PF01769 Divalent cation transporter GYM72_01410 PF03448 MgtE intracellular N domain GYM72_01425 PF17773 UPF0176 acylphosphatase like domain GYM72_01425 PF00581 Rhodanese-like domain GYM72_01425 PF12368 Rhodanase C-terminal GYM72_01430 PF00795 Carbon-nitrogen hydrolase GYM72_01435 PF00830 Ribosomal L28 family GYM72_01440 PF00471 Ribosomal protein L33 GYM72_01450 PF00448 SRP54-type protein, GTPase domain GYM72_01450 PF02881 SRP54-type protein, helical bundle domain GYM72_01460 PF01327 Polypeptide deformylase GYM72_01465 PF01926 50S ribosome-binding GTPase GYM72_01465 PF12631 MnmE helical domain GYM72_01465 PF10396 GTP-binding protein TrmE N-terminus GYM72_01470 PF07693 KAP family P-loop domain GYM72_01510 PF03960 ArsC family GYM72_01520 PF00579 tRNA synthetases class I (W and Y) GYM72_01525 PF01252 Signal peptidase (SPase) II GYM72_01535 PF00133 tRNA synthetases class I (I, L, M and V) GYM72_01535 PF08264 Anticodon-binding domain of tRNA GYM72_01540 PF13091 PLD-like domain GYM72_01540 PF13396 Phospholipase_D-nuclease N-terminal GYM72_01550 PF01488 Shikimate / quinate 5-dehydrogenase GYM72_01550 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GYM72_01550 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GYM72_01555 PF03483 B3/4 domain GYM72_01555 PF03484 tRNA synthetase B5 domain GYM72_01555 PF03147 Ferredoxin-fold anticodon binding domain GYM72_01555 PF01588 Putative tRNA binding domain GYM72_01555 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GYM72_01560 PF02768 DNA polymerase III beta subunit, C-terminal domain GYM72_01560 PF00712 DNA polymerase III beta subunit, N-terminal domain GYM72_01560 PF02767 DNA polymerase III beta subunit, central domain GYM72_01570 PF04717 Type VI secretion system, phage-baseplate injector GYM72_01675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GYM72_01675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GYM72_01680 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GYM72_01680 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GYM72_01685 PF01624 MutS domain I GYM72_01685 PF05188 MutS domain II GYM72_01685 PF05192 MutS domain III GYM72_01685 PF05190 MutS family domain IV GYM72_01685 PF00488 MutS domain V GYM72_01690 PF02525 Flavodoxin-like fold GYM72_01695 PF01638 HxlR-like helix-turn-helix GYM72_01715 PF04231 Endonuclease I GYM72_01735 PF17757 UvrB interaction domain GYM72_01735 PF03461 TRCF domain GYM72_01735 PF00271 Helicase conserved C-terminal domain GYM72_01735 PF02559 CarD-like/TRCF domain GYM72_01735 PF00270 DEAD/DEAH box helicase GYM72_01745 PF00535 Glycosyl transferase family 2 GYM72_01750 PF01195 Peptidyl-tRNA hydrolase GYM72_01755 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain GYM72_01755 PF01522 Polysaccharide deacetylase GYM72_01760 PF11798 IMS family HHH motif GYM72_01760 PF00817 impB/mucB/samB family GYM72_01760 PF11799 impB/mucB/samB family C-terminal domain GYM72_01785 PF01119 DNA mismatch repair protein, C-terminal domain GYM72_01785 PF08676 MutL C terminal dimerisation domain GYM72_01805 PF02705 K+ potassium transporter GYM72_01810 PF16363 GDP-mannose 4,6 dehydratase GYM72_01815 PF00464 Serine hydroxymethyltransferase GYM72_01820 PF00501 AMP-binding enzyme GYM72_01830 PF00005 ABC transporter GYM72_01840 PF01063 Amino-transferase class IV GYM72_01845 PF01266 FAD dependent oxidoreductase GYM72_01845 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GYM72_01860 PF00403 Heavy-metal-associated domain GYM72_01865 PF00271 Helicase conserved C-terminal domain GYM72_01865 PF00270 DEAD/DEAH box helicase GYM72_01870 PF13545 Crp-like helix-turn-helix domain GYM72_01870 PF00027 Cyclic nucleotide-binding domain GYM72_01875 PF03605 Anaerobic c4-dicarboxylate membrane transporter GYM72_01880 PF10415 Fumarase C C-terminus GYM72_01880 PF00206 Lyase GYM72_01885 PF06826 Predicted Permease Membrane Region GYM72_01890 PF00155 Aminotransferase class I and II GYM72_01895 PF00710 Asparaginase, N-terminal GYM72_01895 PF17763 Glutaminase/Asparaginase C-terminal domain GYM72_01905 PF00501 AMP-binding enzyme GYM72_01905 PF13193 AMP-binding enzyme C-terminal domain GYM72_01910 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GYM72_01910 PF13378 Enolase C-terminal domain-like GYM72_01920 PF02589 LUD domain GYM72_01925 PF13183 4Fe-4S dicluster domain GYM72_01925 PF02589 LUD domain GYM72_01925 PF11870 Domain of unknown function (DUF3390) GYM72_01930 PF02754 Cysteine-rich domain GYM72_01935 PF01171 PP-loop family GYM72_01935 PF11734 TilS substrate C-terminal domain GYM72_01940 PF03631 Virulence factor BrkB GYM72_01960 PF01432 Peptidase family M3 GYM72_01975 PF04002 RadC-like JAB domain GYM72_02025 PF00005 ABC transporter GYM72_02025 PF17755 UvrA DNA-binding domain GYM72_02025 PF17760 UvrA interaction domain GYM72_02055 PF00004 ATPase family associated with various cellular activities (AAA) GYM72_02055 PF07724 AAA domain (Cdc48 subfamily) GYM72_02055 PF17871 AAA lid domain GYM72_02055 PF02861 Clp amino terminal domain, pathogenicity island component GYM72_02055 PF10431 C-terminal, D2-small domain, of ClpB protein GYM72_02130 PF02631 RecX family GYM72_02135 PF00085 Thioredoxin GYM72_02150 PF02146 Sir2 family GYM72_02160 PF00571 CBS domain GYM72_02160 PF00291 Pyridoxal-phosphate dependent enzyme GYM72_02165 PF00155 Aminotransferase class I and II GYM72_02170 PF02580 D-Tyr-tRNA(Tyr) deacylase GYM72_02175 PF13488 Glycine zipper GYM72_02175 PF00691 OmpA family GYM72_02180 PF03372 Endonuclease/Exonuclease/phosphatase family GYM72_02195 PF13186 Iron-sulfur cluster-binding domain GYM72_02195 PF04055 Radical SAM superfamily GYM72_02200 PF00664 ABC transporter transmembrane region GYM72_02200 PF03412 Peptidase C39 family GYM72_02200 PF00005 ABC transporter GYM72_02215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GYM72_02215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GYM72_02245 PF00999 Sodium/hydrogen exchanger family GYM72_02250 PF00248 Aldo/keto reductase family GYM72_02255 PF00994 Probable molybdopterin binding domain GYM72_02255 PF18146 Damage-inducible protein CinA KH domain GYM72_02255 PF02464 Competence-damaged protein GYM72_02260 PF13419 Haloacid dehalogenase-like hydrolase GYM72_02270 PF01368 DHH family GYM72_02270 PF02833 DHHA2 domain GYM72_02275 PF02881 SRP54-type protein, helical bundle domain GYM72_02275 PF02978 Signal peptide binding domain GYM72_02275 PF00448 SRP54-type protein, GTPase domain GYM72_02285 PF01923 Cobalamin adenosyltransferase GYM72_02295 PF00588 SpoU rRNA Methylase family GYM72_02295 PF08032 RNA 2'-O ribose methyltransferase substrate binding GYM72_02305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_02305 PF00512 His Kinase A (phospho-acceptor) domain GYM72_02305 PF00989 PAS fold GYM72_02310 PF00005 ABC transporter GYM72_02310 PF12399 Branched-chain amino acid ATP-binding cassette transporter GYM72_02325 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_02335 PF08525 Opacity-associated protein A N-terminal motif GYM72_02335 PF01551 Peptidase family M23 GYM72_02335 PF01476 LysM domain GYM72_02340 PF18073 Rubredoxin metal binding domain GYM72_02370 PF01546 Peptidase family M20/M25/M40 GYM72_02370 PF07687 Peptidase dimerisation domain GYM72_02375 PF02646 RmuC family GYM72_02380 PF02638 Glycosyl hydrolase-like 10 GYM72_02390 PF03485 Arginyl tRNA synthetase N terminal domain GYM72_02390 PF05746 DALR anticodon binding domain GYM72_02390 PF00750 tRNA synthetases class I (R) GYM72_02400 PF12169 DNA polymerase III subunits gamma and tau domain III GYM72_02410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GYM72_02410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GYM72_02415 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GYM72_02415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GYM72_02420 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GYM72_02425 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal GYM72_02425 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal GYM72_02430 PF00202 Aminotransferase class-III GYM72_02435 PF01048 Phosphorylase superfamily GYM72_02440 PF04389 Peptidase family M28 GYM72_02450 PF01551 Peptidase family M23 GYM72_02450 PF04225 Opacity-associated protein A LysM-like domain GYM72_02460 PF01268 Formate--tetrahydrofolate ligase GYM72_02465 PF01966 HD domain GYM72_02465 PF13286 Phosphohydrolase-associated domain GYM72_02470 PF00488 MutS domain V GYM72_02470 PF01713 Smr domain GYM72_02475 PF04134 Protein of unknown function, DUF393 GYM72_02490 PF02237 Biotin protein ligase C terminal domain GYM72_02490 PF03099 Biotin/lipoate A/B protein ligase family GYM72_02490 PF03309 Type III pantothenate kinase GYM72_02500 PF00004 ATPase family associated with various cellular activities (AAA) GYM72_02500 PF17862 AAA+ lid domain GYM72_02500 PF01434 Peptidase family M41 GYM72_02515 PF02666 Phosphatidylserine decarboxylase GYM72_02520 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GYM72_02520 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GYM72_02530 PF07715 TonB-dependent Receptor Plug Domain GYM72_02530 PF00593 TonB dependent receptor GYM72_02540 PF02514 CobN/Magnesium Chelatase GYM72_02560 PF10431 C-terminal, D2-small domain, of ClpB protein GYM72_02560 PF02861 Clp amino terminal domain, pathogenicity island component GYM72_02560 PF17871 AAA lid domain GYM72_02560 PF00004 ATPase family associated with various cellular activities (AAA) GYM72_02560 PF07724 AAA domain (Cdc48 subfamily) GYM72_02565 PF07690 Major Facilitator Superfamily GYM72_02570 PF07715 TonB-dependent Receptor Plug Domain GYM72_02570 PF00593 TonB dependent receptor GYM72_02575 PF13520 Amino acid permease GYM72_02580 PF01640 Peptidase C10 family GYM72_02580 PF13734 Spi protease inhibitor GYM72_02590 PF02585 GlcNAc-PI de-N-acetylase GYM72_02600 PF01197 Ribosomal protein L31 GYM72_02605 PF00180 Isocitrate/isopropylmalate dehydrogenase GYM72_02610 PF13193 AMP-binding enzyme C-terminal domain GYM72_02610 PF00501 AMP-binding enzyme GYM72_02615 PF08360 QacR-like protein, C-terminal region GYM72_02615 PF00440 Bacterial regulatory proteins, tetR family GYM72_02625 PF07664 Ferrous iron transport protein B C terminus GYM72_02625 PF02421 Ferrous iron transport protein B GYM72_02625 PF07670 Nucleoside recognition GYM72_02645 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GYM72_02645 PF14572 Phosphoribosyl synthetase-associated domain GYM72_02650 PF14693 Ribosomal protein TL5, C-terminal domain GYM72_02650 PF01386 Ribosomal L25p family GYM72_02660 PF02569 Pantoate-beta-alanine ligase GYM72_02665 PF08323 Starch synthase catalytic domain GYM72_02665 PF00534 Glycosyl transferases group 1 GYM72_02675 PF01380 SIS domain GYM72_02680 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GYM72_02680 PF01676 Metalloenzyme superfamily GYM72_02695 PF01509 TruB family pseudouridylate synthase (N terminal domain) GYM72_02700 PF00455 DeoR C terminal sensor domain GYM72_02700 PF08220 DeoR-like helix-turn-helix domain GYM72_02705 PF00230 Major intrinsic protein GYM72_02710 PF00923 Transaldolase/Fructose-6-phosphate aldolase GYM72_02715 PF13685 Iron-containing alcohol dehydrogenase GYM72_02725 PF00596 Class II Aldolase and Adducin N-terminal domain GYM72_02730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GYM72_02735 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GYM72_02735 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GYM72_02740 PF02779 Transketolase, pyrimidine binding domain GYM72_02740 PF00456 Transketolase, thiamine diphosphate binding domain GYM72_02740 PF02780 Transketolase, C-terminal domain GYM72_02760 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase GYM72_02770 PF08534 Redoxin GYM72_02780 PF01406 tRNA synthetases class I (C) catalytic domain GYM72_02780 PF09190 DALR domain GYM72_02785 PF01227 GTP cyclohydrolase I GYM72_02790 PF06803 Protein of unknown function (DUF1232) GYM72_02800 PF00465 Iron-containing alcohol dehydrogenase GYM72_02805 PF00231 ATP synthase GYM72_02810 PF00306 ATP synthase alpha/beta chain, C terminal domain GYM72_02810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GYM72_02810 PF02874 ATP synthase alpha/beta family, beta-barrel domain GYM72_02815 PF00213 ATP synthase delta (OSCP) subunit GYM72_02820 PF00430 ATP synthase B/B' CF(0) GYM72_02825 PF00137 ATP synthase subunit C GYM72_02830 PF00119 ATP synthase A chain GYM72_02845 PF01783 Ribosomal L32p protein family GYM72_02850 PF00364 Biotin-requiring enzyme GYM72_02855 PF02785 Biotin carboxylase C-terminal domain GYM72_02855 PF00289 Biotin carboxylase, N-terminal domain GYM72_02855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GYM72_02865 PF01368 DHH family GYM72_02865 PF02272 DHHA1 domain GYM72_02865 PF01743 Poly A polymerase head domain GYM72_02865 PF00571 CBS domain GYM72_02870 PF01300 Telomere recombination GYM72_02875 PF07549 SecD/SecF GG Motif GYM72_02875 PF02355 Protein export membrane protein GYM72_02880 PF02416 mttA/Hcf106 family GYM72_02885 PF01569 PAP2 superfamily GYM72_02890 PF03825 Nucleoside H+ symporter GYM72_02900 PF06418 CTP synthase N-terminus GYM72_02900 PF00117 Glutamine amidotransferase class-I GYM72_02905 PF02096 60Kd inner membrane protein GYM72_02905 PF14849 YidC periplasmic domain GYM72_02910 PF10415 Fumarase C C-terminus GYM72_02910 PF00206 Lyase GYM72_02915 PF00365 Phosphofructokinase GYM72_02920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GYM72_02920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GYM72_02925 PF00468 Ribosomal protein L34 GYM72_02955 PF00939 Sodium:sulfate symporter transmembrane region GYM72_02960 PF10459 Peptidase S46 GYM72_02965 PF02824 TGS domain GYM72_02965 PF04607 Region found in RelA / SpoT proteins GYM72_02965 PF13291 ACT domain GYM72_02970 PF03976 Polyphosphate kinase 2 (PPK2) GYM72_02975 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase GYM72_02980 PF02562 PhoH-like protein GYM72_02985 PF02224 Cytidylate kinase GYM72_03000 PF01678 Diaminopimelate epimerase GYM72_03010 PF13732 Domain of unknown function (DUF4162) GYM72_03010 PF00005 ABC transporter GYM72_03025 PF01926 50S ribosome-binding GTPase GYM72_03025 PF13167 GTP-binding GTPase N-terminal GYM72_03025 PF16360 GTP-binding GTPase Middle Region GYM72_03030 PF13673 Acetyltransferase (GNAT) domain GYM72_03030 PF03352 Methyladenine glycosylase GYM72_03030 PF00117 Glutamine amidotransferase class-I GYM72_03030 PF13302 Acetyltransferase (GNAT) domain GYM72_03030 PF00958 GMP synthase C terminal domain GYM72_03040 PF01475 Ferric uptake regulator family GYM72_03045 PF01625 Peptide methionine sulfoxide reductase GYM72_03050 PF00478 IMP dehydrogenase / GMP reductase domain GYM72_03050 PF00571 CBS domain GYM72_03060 PF07690 Major Facilitator Superfamily GYM72_03065 PF02390 Putative methyltransferase GYM72_03070 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GYM72_03075 PF02874 ATP synthase alpha/beta family, beta-barrel domain GYM72_03075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GYM72_03080 PF06574 FAD synthetase GYM72_03080 PF01687 Riboflavin kinase GYM72_03090 PF02272 DHHA1 domain GYM72_03090 PF01368 DHH family GYM72_03105 PF03781 Sulfatase-modifying factor enzyme 1 GYM72_03120 PF00266 Aminotransferase class-V GYM72_03125 PF00375 Sodium:dicarboxylate symporter family GYM72_03130 PF12706 Beta-lactamase superfamily domain GYM72_03135 PF00860 Permease family GYM72_03145 PF01472 PUA domain GYM72_03145 PF00696 Amino acid kinase family GYM72_03150 PF03831 PhnA domain GYM72_03150 PF08274 PhnA Zinc-Ribbon GYM72_03160 PF13460 NAD(P)H-binding GYM72_03165 PF03458 UPF0126 domain GYM72_03175 PF17760 UvrA interaction domain GYM72_03175 PF17755 UvrA DNA-binding domain GYM72_03180 PF02502 Ribose/Galactose Isomerase GYM72_03200 PF13614 AAA domain GYM72_03210 PF02719 Polysaccharide biosynthesis protein GYM72_03215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GYM72_03220 PF00953 Glycosyl transferase family 4 GYM72_03230 PF00535 Glycosyl transferase family 2 GYM72_03240 PF01501 Glycosyl transferase family 8 GYM72_03240 PF00535 Glycosyl transferase family 2 GYM72_03245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GYM72_03260 PF03062 MBOAT, membrane-bound O-acyltransferase family GYM72_03265 PF02899 Phage integrase, N-terminal SAM-like domain GYM72_03265 PF00589 Phage integrase family GYM72_03280 PF01042 Endoribonuclease L-PSP GYM72_03290 PF01520 N-acetylmuramoyl-L-alanine amidase GYM72_03295 PF00535 Glycosyl transferase family 2 GYM72_03300 PF13537 Glutamine amidotransferase domain GYM72_03300 PF00733 Asparagine synthase GYM72_03305 PF02112 cAMP phosphodiesterases class-II GYM72_03310 PF01725 Ham1 family GYM72_03320 PF02590 Predicted SPOUT methyltransferase GYM72_03360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GYM72_03360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GYM72_03360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GYM72_03360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GYM72_03365 PF00149 Calcineurin-like phosphoesterase GYM72_03375 PF00338 Ribosomal protein S10p/S20e GYM72_03380 PF03764 Elongation factor G, domain IV GYM72_03380 PF14492 Elongation Factor G, domain II GYM72_03380 PF00009 Elongation factor Tu GTP binding domain GYM72_03380 PF03144 Elongation factor Tu domain 2 GYM72_03380 PF00679 Elongation factor G C-terminus GYM72_03385 PF00177 Ribosomal protein S7p/S5e GYM72_03390 PF00164 Ribosomal protein S12/S23 GYM72_03410 PF13439 Glycosyltransferase Family 4 GYM72_03410 PF00534 Glycosyl transferases group 1 GYM72_03415 PF01842 ACT domain GYM72_03415 PF00742 Homoserine dehydrogenase GYM72_03415 PF03447 Homoserine dehydrogenase, NAD binding domain GYM72_03420 PF01053 Cys/Met metabolism PLP-dependent enzyme GYM72_03425 PF13411 MerR HTH family regulatory protein GYM72_03435 PF08264 Anticodon-binding domain of tRNA GYM72_03435 PF00133 tRNA synthetases class I (I, L, M and V) GYM72_03435 PF13603 Leucyl-tRNA synthetase, Domain 2 GYM72_03450 PF05593 RHS Repeat GYM72_03460 PF05593 RHS Repeat GYM72_03480 PF05593 RHS Repeat GYM72_03500 PF12344 Ultra-violet resistance protein B GYM72_03500 PF17757 UvrB interaction domain GYM72_03500 PF04851 Type III restriction enzyme, res subunit GYM72_03500 PF00271 Helicase conserved C-terminal domain GYM72_03510 PF01177 Asp/Glu/Hydantoin racemase GYM72_03515 PF06969 HemN C-terminal domain GYM72_03515 PF04055 Radical SAM superfamily GYM72_03530 PF02540 NAD synthase GYM72_03530 PF00795 Carbon-nitrogen hydrolase GYM72_03540 PF03006 Haemolysin-III related GYM72_03545 PF01121 Dephospho-CoA kinase GYM72_03550 PF01189 16S rRNA methyltransferase RsmB/F GYM72_03550 PF01029 NusB family GYM72_03565 PF00293 NUDIX domain GYM72_03570 PF01894 Uncharacterised protein family UPF0047 GYM72_03580 PF01814 Hemerythrin HHE cation binding domain GYM72_03580 PF04405 Domain of Unknown function (DUF542) GYM72_03590 PF02082 Transcriptional regulator GYM72_03595 PF07690 Major Facilitator Superfamily GYM72_03600 PF07690 Major Facilitator Superfamily GYM72_03610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GYM72_03610 PF01568 Molydopterin dinucleotide binding domain GYM72_03610 PF00384 Molybdopterin oxidoreductase GYM72_03615 PF13247 4Fe-4S dicluster domain GYM72_03615 PF09163 Formate dehydrogenase N, transmembrane GYM72_03630 PF04055 Radical SAM superfamily GYM72_03630 PF06463 Molybdenum Cofactor Synthesis C GYM72_03635 PF03453 MoeA N-terminal region (domain I and II) GYM72_03635 PF03454 MoeA C-terminal region (domain IV) GYM72_03635 PF00994 Probable molybdopterin binding domain GYM72_03640 PF03459 TOBE domain GYM72_03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GYM72_03645 PF12804 MobA-like NTP transferase domain GYM72_03655 PF00899 ThiF family GYM72_03655 PF00581 Rhodanese-like domain GYM72_03665 PF03473 MOSC domain GYM72_03665 PF03475 3-alpha domain GYM72_03675 PF00994 Probable molybdopterin binding domain GYM72_03675 PF01967 MoaC family GYM72_03685 PF00528 Binding-protein-dependent transport system inner membrane component GYM72_03690 PF00005 ABC transporter GYM72_03690 PF08402 TOBE domain GYM72_03700 PF01541 GIY-YIG catalytic domain GYM72_03700 PF08459 UvrC Helix-hairpin-helix N-terminal GYM72_03705 PF00817 impB/mucB/samB family GYM72_03705 PF11799 impB/mucB/samB family C-terminal domain GYM72_03705 PF11798 IMS family HHH motif GYM72_03705 PF13438 Domain of unknown function (DUF4113) GYM72_03710 PF00717 Peptidase S24-like GYM72_03845 PF03979 Sigma-70 factor, region 1.1 GYM72_03845 PF04542 Sigma-70 region 2 GYM72_03845 PF04539 Sigma-70 region 3 GYM72_03845 PF04545 Sigma-70, region 4 GYM72_03845 PF00140 Sigma-70 factor, region 1.2 GYM72_03850 PF03466 LysR substrate binding domain GYM72_03850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GYM72_03855 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_03860 PF00111 2Fe-2S iron-sulfur cluster binding domain GYM72_03875 PF01817 Chorismate mutase type II GYM72_03875 PF00793 DAHP synthetase I family GYM72_03880 PF16745 RsgA N-terminal domain GYM72_03880 PF03193 RsgA GTPase GYM72_03890 PF00873 AcrB/AcrD/AcrF family GYM72_03895 PF00529 HlyD membrane-fusion protein of T1SS GYM72_03895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GYM72_03905 PF05552 Conserved TM helix GYM72_03905 PF00924 Mechanosensitive ion channel GYM72_03910 PF02033 Ribosome-binding factor A GYM72_03920 PF00483 Nucleotidyl transferase GYM72_03945 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GYM72_03960 PF01513 ATP-NAD kinase GYM72_03975 PF03477 ATP cone domain GYM72_03975 PF02867 Ribonucleotide reductase, barrel domain GYM72_03975 PF00317 Ribonucleotide reductase, all-alpha domain GYM72_03980 PF00226 DnaJ domain GYM72_03980 PF00684 DnaJ central domain GYM72_03980 PF01556 DnaJ C terminal domain GYM72_03995 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GYM72_03995 PF00364 Biotin-requiring enzyme GYM72_03995 PF02817 e3 binding domain GYM72_04025 PF01501 Glycosyl transferase family 8 GYM72_04025 PF00535 Glycosyl transferase family 2 GYM72_04075 PF01106 NifU-like domain GYM72_04075 PF01521 Iron-sulphur cluster biosynthesis GYM72_04080 PF10609 NUBPL iron-transfer P-loop NTPase GYM72_04095 PF00207 Alpha-2-macroglobulin family GYM72_04095 PF07703 Alpha-2-macroglobulin bait region domain GYM72_04095 PF01835 MG2 domain GYM72_04110 PF07690 Major Facilitator Superfamily GYM72_04120 PF00303 Thymidylate synthase GYM72_04125 PF04552 Sigma-54, DNA binding domain GYM72_04125 PF04963 Sigma-54 factor, core binding domain GYM72_04125 PF00309 Sigma-54 factor, Activator interacting domain (AID) GYM72_04130 PF00152 tRNA synthetases class II (D, K and N) GYM72_04130 PF01336 OB-fold nucleic acid binding domain GYM72_04135 PF00144 Beta-lactamase GYM72_04155 PF00485 Phosphoribulokinase / Uridine kinase family GYM72_04160 PF01180 Dihydroorotate dehydrogenase GYM72_04175 PF09334 tRNA synthetases class I (M) GYM72_04175 PF08264 Anticodon-binding domain of tRNA GYM72_04175 PF01588 Putative tRNA binding domain GYM72_04200 PF05697 Bacterial trigger factor protein (TF) GYM72_04200 PF05698 Bacterial trigger factor protein (TF) C-terminus GYM72_04200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GYM72_04215 PF00795 Carbon-nitrogen hydrolase GYM72_04220 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GYM72_04220 PF05221 S-adenosyl-L-homocysteine hydrolase GYM72_04225 PF00871 Acetokinase family GYM72_04240 PF05195 Aminopeptidase P, N-terminal domain GYM72_04240 PF00557 Metallopeptidase family M24 GYM72_04350 PF07687 Peptidase dimerisation domain GYM72_04350 PF01546 Peptidase family M20/M25/M40 GYM72_04355 PF00709 Adenylosuccinate synthetase GYM72_04365 PF00127 Copper binding proteins, plastocyanin/azurin family GYM72_04370 PF03881 Fructosamine kinase GYM72_04375 PF00902 Sec-independent protein translocase protein (TatC) GYM72_04380 PF01380 SIS domain GYM72_04380 PF00571 CBS domain GYM72_04385 PF00570 HRDC domain GYM72_04385 PF00270 DEAD/DEAH box helicase GYM72_04385 PF00271 Helicase conserved C-terminal domain GYM72_04385 PF09382 RQC domain GYM72_04385 PF16124 RecQ zinc-binding GYM72_04390 PF01712 Deoxynucleoside kinase GYM72_04415 PF00766 Electron transfer flavoprotein FAD-binding domain GYM72_04415 PF01012 Electron transfer flavoprotein domain GYM72_04435 PF00535 Glycosyl transferase family 2 GYM72_04445 PF00535 Glycosyl transferase family 2 GYM72_04470 PF00403 Heavy-metal-associated domain GYM72_04480 PF08331 Domain of unknown function (DUF1730) GYM72_04485 PF04851 Type III restriction enzyme, res subunit GYM72_04485 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GYM72_04485 PF18074 Primosomal protein N C-terminal domain GYM72_04485 PF17764 3′ DNA-binding domain (3′BD) GYM72_04485 PF00271 Helicase conserved C-terminal domain GYM72_04490 PF01243 Pyridoxamine 5'-phosphate oxidase GYM72_04490 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GYM72_04495 PF02622 Uncharacterized ACR, COG1678 GYM72_04505 PF05343 M42 glutamyl aminopeptidase GYM72_04515 PF05140 ResB-like family GYM72_04515 PF01578 Cytochrome C assembly protein GYM72_04525 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GYM72_04530 PF00535 Glycosyl transferase family 2 GYM72_04540 PF13597 Anaerobic ribonucleoside-triphosphate reductase GYM72_04540 PF03477 ATP cone domain GYM72_04550 PF00521 DNA gyrase/topoisomerase IV, subunit A GYM72_04550 PF03989 DNA gyrase C-terminal domain, beta-propeller GYM72_04560 PF04011 LemA family GYM72_04575 PF00266 Aminotransferase class-V GYM72_04595 PF01025 GrpE GYM72_04600 PF01556 DnaJ C terminal domain GYM72_04600 PF00684 DnaJ central domain GYM72_04600 PF00226 DnaJ domain GYM72_04610 PF01327 Polypeptide deformylase GYM72_04615 PF03652 Holliday junction resolvase GYM72_04620 PF00438 S-adenosylmethionine synthetase, N-terminal domain GYM72_04620 PF02772 S-adenosylmethionine synthetase, central domain GYM72_04620 PF02773 S-adenosylmethionine synthetase, C-terminal domain GYM72_04635 PF00814 Glycoprotease family GYM72_04650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GYM72_04650 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_04655 PF02545 Maf-like protein GYM72_04665 PF05698 Bacterial trigger factor protein (TF) C-terminus GYM72_04670 PF01170 Putative RNA methylase family UPF0020 GYM72_04670 PF02926 THUMP domain GYM72_04680 PF04055 Radical SAM superfamily GYM72_04680 PF00919 Uncharacterized protein family UPF0004 GYM72_04680 PF18693 TRAM domain GYM72_04685 PF00248 Aldo/keto reductase family GYM72_04695 PF03330 Lytic transglycolase GYM72_04695 PF05036 Sporulation related domain GYM72_04705 PF02272 DHHA1 domain GYM72_04705 PF01411 tRNA synthetases class II (A) GYM72_04705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GYM72_04710 PF08338 Domain of unknown function (DUF1731) GYM72_04710 PF01370 NAD dependent epimerase/dehydratase family GYM72_04715 PF08281 Sigma-70, region 4 GYM72_04715 PF04542 Sigma-70 region 2 GYM72_04725 PF00005 ABC transporter GYM72_04730 PF01842 ACT domain GYM72_04730 PF01817 Chorismate mutase type II GYM72_04730 PF00800 Prephenate dehydratase GYM72_04745 PF03462 PCRF domain GYM72_04745 PF00472 RF-1 domain GYM72_04750 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GYM72_04750 PF01367 5'-3' exonuclease, C-terminal SAM fold GYM72_04750 PF01612 3'-5' exonuclease GYM72_04750 PF00476 DNA polymerase family A GYM72_04755 PF02578 Multi-copper polyphenol oxidoreductase laccase GYM72_04770 PF00664 ABC transporter transmembrane region GYM72_04770 PF00005 ABC transporter GYM72_04780 PF13614 AAA domain GYM72_04785 PF17762 HTH domain found in ParB protein GYM72_04785 PF02195 ParB-like nuclease domain GYM72_04795 PF05173 Dihydrodipicolinate reductase, C-terminus GYM72_04795 PF01113 Dihydrodipicolinate reductase, N-terminus GYM72_04800 PF10502 Signal peptidase, peptidase S26 GYM72_04820 PF02129 X-Pro dipeptidyl-peptidase (S15 family) GYM72_04825 PF00881 Nitroreductase family GYM72_04830 PF13673 Acetyltransferase (GNAT) domain GYM72_04840 PF01048 Phosphorylase superfamily GYM72_04845 PF00324 Amino acid permease GYM72_04855 PF00183 Hsp90 protein GYM72_04865 PF08459 UvrC Helix-hairpin-helix N-terminal GYM72_04865 PF02151 UvrB/uvrC motif GYM72_04865 PF01541 GIY-YIG catalytic domain GYM72_04870 PF12002 MgsA AAA+ ATPase C terminal GYM72_04870 PF00004 ATPase family associated with various cellular activities (AAA) GYM72_04870 PF16193 AAA C-terminal domain GYM72_04885 PF00501 AMP-binding enzyme GYM72_04915 PF12161 HsdM N-terminal domain GYM72_04915 PF02384 N-6 DNA Methylase GYM72_04925 PF17763 Glutaminase/Asparaginase C-terminal domain GYM72_04925 PF00710 Asparaginase, N-terminal GYM72_04930 PF00588 SpoU rRNA Methylase family GYM72_04945 PF00204 DNA gyrase B GYM72_04945 PF00986 DNA gyrase B subunit, carboxyl terminus GYM72_04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_04945 PF01751 Toprim domain GYM72_04950 PF00121 Triosephosphate isomerase GYM72_04970 PF00809 Pterin binding enzyme GYM72_04980 PF01938 TRAM domain GYM72_04980 PF00919 Uncharacterized protein family UPF0004 GYM72_04980 PF04055 Radical SAM superfamily GYM72_04985 PF00194 Eukaryotic-type carbonic anhydrase GYM72_04990 PF07690 Major Facilitator Superfamily GYM72_05000 PF02132 RecR protein GYM72_05000 PF13662 Toprim domain GYM72_05005 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_05020 PF01245 Ribosomal protein L19 GYM72_05025 PF01926 50S ribosome-binding GTPase GYM72_05025 PF06071 Protein of unknown function (DUF933) GYM72_05035 PF01264 Chorismate synthase GYM72_05040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GYM72_05040 PF00205 Thiamine pyrophosphate enzyme, central domain GYM72_05040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GYM72_05045 PF01409 tRNA synthetases class II core domain (F) GYM72_05045 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GYM72_05050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GYM72_05055 PF07715 TonB-dependent Receptor Plug Domain GYM72_05055 PF00593 TonB dependent receptor GYM72_05060 PF00085 Thioredoxin GYM72_05075 PF00535 Glycosyl transferase family 2 GYM72_05085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GYM72_05085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GYM72_05085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GYM72_05085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GYM72_05090 PF00291 Pyridoxal-phosphate dependent enzyme GYM72_05095 PF00132 Bacterial transferase hexapeptide (six repeats) GYM72_05105 PF01784 NIF3 (NGG1p interacting factor 3) GYM72_05110 PF03948 Ribosomal protein L9, C-terminal domain GYM72_05110 PF01281 Ribosomal protein L9, N-terminal domain GYM72_05115 PF01084 Ribosomal protein S18 GYM72_05120 PF01250 Ribosomal protein S6 GYM72_05125 PF01761 3-dehydroquinate synthase GYM72_05140 PF13085 2Fe-2S iron-sulfur cluster binding domain GYM72_05145 PF02910 Fumarate reductase flavoprotein C-term GYM72_05145 PF00890 FAD binding domain GYM72_05175 PF01467 Cytidylyltransferase-like GYM72_05180 PF07478 D-ala D-ala ligase C-terminus GYM72_05180 PF01820 D-ala D-ala ligase N-terminus GYM72_05190 PF01479 S4 domain GYM72_05190 PF00849 RNA pseudouridylate synthase GYM72_05200 PF00793 DAHP synthetase I family GYM72_05205 PF04055 Radical SAM superfamily GYM72_05205 PF06969 HemN C-terminal domain GYM72_05220 PF10458 Valyl tRNA synthetase tRNA binding arm GYM72_05220 PF00133 tRNA synthetases class I (I, L, M and V) GYM72_05220 PF08264 Anticodon-binding domain of tRNA GYM72_05225 PF12704 MacB-like periplasmic core domain GYM72_05225 PF00005 ABC transporter GYM72_05225 PF02687 FtsX-like permease family GYM72_05230 PF02687 FtsX-like permease family GYM72_05230 PF12704 MacB-like periplasmic core domain GYM72_05230 PF00005 ABC transporter GYM72_05235 PF00005 ABC transporter GYM72_05240 PF00698 Acyl transferase domain GYM72_05250 PF10079 Bacillithiol biosynthesis BshC GYM72_05255 PF04717 Type VI secretion system, phage-baseplate injector GYM72_05265 PF05488 PAAR motif GYM72_05265 PF05593 RHS Repeat GYM72_05300 PF05175 Methyltransferase small domain GYM72_05300 PF17827 PrmC N-terminal domain GYM72_05305 PF07517 SecA DEAD-like domain GYM72_05305 PF07516 SecA Wing and Scaffold domain GYM72_05305 PF01043 SecA preprotein cross-linking domain GYM72_05320 PF00549 CoA-ligase GYM72_05320 PF02629 CoA binding domain GYM72_05325 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GYM72_05325 PF00132 Bacterial transferase hexapeptide (six repeats) GYM72_05330 PF09285 Elongation factor P, C-terminal GYM72_05330 PF08207 Elongation factor P (EF-P) KOW-like domain GYM72_05330 PF01132 Elongation factor P (EF-P) OB domain GYM72_05335 PF00132 Bacterial transferase hexapeptide (six repeats) GYM72_05335 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GYM72_05340 PF07977 FabA-like domain GYM72_05340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GYM72_05345 PF00132 Bacterial transferase hexapeptide (six repeats) GYM72_05345 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GYM72_05350 PF01966 HD domain GYM72_05355 PF00072 Response regulator receiver domain GYM72_05355 PF00158 Sigma-54 interaction domain GYM72_05355 PF02954 Bacterial regulatory protein, Fis family GYM72_05375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GYM72_05375 PF01842 ACT domain GYM72_05375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GYM72_05380 PF00266 Aminotransferase class-V GYM72_05385 PF00037 4Fe-4S binding domain GYM72_05395 PF00701 Dihydrodipicolinate synthetase family GYM72_05410 PF04127 DNA / pantothenate metabolism flavoprotein GYM72_05410 PF02441 Flavoprotein GYM72_05420 PF02463 RecF/RecN/SMC N terminal domain GYM72_05425 PF02525 Flavodoxin-like fold GYM72_05430 PF08245 Mur ligase middle domain GYM72_05430 PF02875 Mur ligase family, glutamate ligase domain GYM72_05430 PF01225 Mur ligase family, catalytic domain GYM72_05445 PF00364 Biotin-requiring enzyme GYM72_05445 PF02817 e3 binding domain GYM72_05445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GYM72_05450 PF16870 2-oxoglutarate dehydrogenase C-terminal GYM72_05450 PF02779 Transketolase, pyrimidine binding domain GYM72_05450 PF16078 2-oxoglutarate dehydrogenase N-terminus GYM72_05450 PF00676 Dehydrogenase E1 component GYM72_05455 PF00781 Diacylglycerol kinase catalytic domain GYM72_05460 PF00834 Ribulose-phosphate 3 epimerase family GYM72_05485 PF00216 Bacterial DNA-binding protein GYM72_05505 PF00155 Aminotransferase class I and II GYM72_05510 PF01565 FAD binding domain GYM72_05510 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GYM72_05515 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GYM72_05565 PF02463 RecF/RecN/SMC N terminal domain GYM72_05590 PF01554 MatE GYM72_05595 PF01545 Cation efflux family GYM72_05595 PF16916 Dimerisation domain of Zinc Transporter GYM72_05605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GYM72_05615 PF02627 Carboxymuconolactone decarboxylase family GYM72_05620 PF01497 Periplasmic binding protein GYM72_05620 PF12833 Helix-turn-helix domain GYM72_05635 PF08543 Phosphomethylpyrimidine kinase GYM72_05640 PF17820 PDZ domain GYM72_05640 PF13180 PDZ domain GYM72_05645 PF01926 50S ribosome-binding GTPase GYM72_05645 PF01018 GTP1/OBG GYM72_05655 PF00156 Phosphoribosyl transferase domain GYM72_05660 PF00582 Universal stress protein family GYM72_05665 PF02163 Peptidase family M50 GYM72_05665 PF17820 PDZ domain GYM72_05675 PF02397 Bacterial sugar transferase GYM72_05685 PF13614 AAA domain GYM72_05695 PF02541 Ppx/GppA phosphatase family GYM72_05700 PF02503 Polyphosphate kinase middle domain GYM72_05700 PF17941 Polyphosphate kinase C-terminal domain 1 GYM72_05700 PF13090 Polyphosphate kinase C-terminal domain 2 GYM72_05700 PF13089 Polyphosphate kinase N-terminal domain GYM72_05705 PF11818 C-terminal domain of tail specific protease (DUF3340) GYM72_05705 PF17804 Tail specific protease N-terminal domain GYM72_05705 PF03572 Peptidase family S41 GYM72_05705 PF00595 PDZ domain GYM72_05710 PF01975 Survival protein SurE GYM72_05720 PF00155 Aminotransferase class I and II GYM72_05725 PF03605 Anaerobic c4-dicarboxylate membrane transporter GYM72_05730 PF00005 ABC transporter GYM72_05735 PF01032 FecCD transport family GYM72_05740 PF01565 FAD binding domain GYM72_05740 PF02913 FAD linked oxidases, C-terminal domain GYM72_05755 PF01751 Toprim domain GYM72_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_05755 PF00986 DNA gyrase B subunit, carboxyl terminus GYM72_05755 PF00204 DNA gyrase B GYM72_05765 PF00521 DNA gyrase/topoisomerase IV, subunit A GYM72_05770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GYM72_05770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GYM72_05785 PF13350 Tyrosine phosphatase family GYM72_05790 PF00403 Heavy-metal-associated domain GYM72_05795 PF03061 Thioesterase superfamily GYM72_05800 PF00425 chorismate binding enzyme GYM72_05800 PF04715 Anthranilate synthase component I, N terminal region GYM72_05815 PF07715 TonB-dependent Receptor Plug Domain GYM72_05815 PF00593 TonB dependent receptor GYM72_05825 PF00082 Subtilase family GYM72_05845 PF00574 Clp protease GYM72_05855 PF03449 Transcription elongation factor, N-terminal GYM72_05855 PF01272 Transcription elongation factor, GreA/GreB, C-term GYM72_05915 PF00182 Chitinase class I GYM72_05930 PF02769 AIR synthase related protein, C-terminal domain GYM72_05930 PF00586 AIR synthase related protein, N-terminal domain GYM72_05935 PF00886 Ribosomal protein S16 GYM72_05940 PF01782 RimM N-terminal domain GYM72_05945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GYM72_05950 PF01966 HD domain GYM72_05960 PF08521 Two-component sensor kinase N-terminal GYM72_05960 PF00512 His Kinase A (phospho-acceptor) domain GYM72_05960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_05965 PF00072 Response regulator receiver domain GYM72_05965 PF00486 Transcriptional regulatory protein, C terminal GYM72_05970 PF00873 AcrB/AcrD/AcrF family GYM72_05975 PF00529 HlyD membrane-fusion protein of T1SS GYM72_05975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GYM72_05990 PF03974 Ecotin GYM72_06000 PF02779 Transketolase, pyrimidine binding domain GYM72_06000 PF02780 Transketolase, C-terminal domain GYM72_06005 PF13175 AAA ATPase domain GYM72_06015 PF11838 ERAP1-like C-terminal domain GYM72_06015 PF01433 Peptidase family M1 domain GYM72_06020 PF00186 Dihydrofolate reductase GYM72_06035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GYM72_06035 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GYM72_06045 PF00248 Aldo/keto reductase family GYM72_06055 PF00106 short chain dehydrogenase GYM72_06065 PF01174 SNO glutamine amidotransferase family GYM72_06070 PF01680 SOR/SNZ family GYM72_06075 PF03641 Possible lysine decarboxylase GYM72_06090 PF00691 OmpA family GYM72_06090 PF05736 OprF membrane domain GYM72_06110 PF02311 AraC-like ligand binding domain GYM72_06110 PF12833 Helix-turn-helix domain GYM72_06115 PF01757 Acyltransferase family GYM72_06170 PF01202 Shikimate kinase GYM72_06175 PF01479 S4 domain GYM72_06190 PF00535 Glycosyl transferase family 2 GYM72_06210 PF07715 TonB-dependent Receptor Plug Domain GYM72_06210 PF00593 TonB dependent receptor GYM72_06220 PF00361 Proton-conducting membrane transporter GYM72_06225 PF04371 Porphyromonas-type peptidyl-arginine deiminase GYM72_06235 PF17676 LD-carboxypeptidase C-terminal domain GYM72_06235 PF02016 LD-carboxypeptidase N-terminal domain GYM72_06270 PF00117 Glutamine amidotransferase class-I GYM72_06270 PF00958 GMP synthase C terminal domain GYM72_06270 PF02540 NAD synthase GYM72_06275 PF00072 Response regulator receiver domain GYM72_06275 PF00158 Sigma-54 interaction domain GYM72_06275 PF02954 Bacterial regulatory protein, Fis family GYM72_06280 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GYM72_06280 PF00925 GTP cyclohydrolase II GYM72_06285 PF01546 Peptidase family M20/M25/M40 GYM72_06285 PF07687 Peptidase dimerisation domain GYM72_06290 PF00082 Subtilase family GYM72_06305 PF00199 Catalase GYM72_06305 PF06628 Catalase-related immune-responsive GYM72_06310 PF13361 UvrD-like helicase C-terminal domain GYM72_06310 PF00580 UvrD/REP helicase N-terminal domain GYM72_06315 PF01293 Phosphoenolpyruvate carboxykinase GYM72_06330 PF13533 Biotin-lipoyl like GYM72_06340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GYM72_06360 PF01808 AICARFT/IMPCHase bienzyme GYM72_06360 PF02142 MGS-like domain GYM72_06375 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) GYM72_06385 PF01597 Glycine cleavage H-protein GYM72_06395 PF07499 RuvA, C-terminal domain GYM72_06395 PF01330 RuvA N terminal domain GYM72_06400 PF00390 Malic enzyme, N-terminal domain GYM72_06400 PF03949 Malic enzyme, NAD binding domain GYM72_06400 PF01515 Phosphate acetyl/butaryl transferase GYM72_06410 PF00654 Voltage gated chloride channel GYM72_06415 PF01256 Carbohydrate kinase GYM72_06420 PF02245 Methylpurine-DNA glycosylase (MPG) GYM72_06425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GYM72_06425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GYM72_06430 PF00575 S1 RNA binding domain GYM72_06470 PF00933 Glycosyl hydrolase family 3 N terminal domain GYM72_06480 PF00106 short chain dehydrogenase GYM72_06485 PF00210 Ferritin-like domain GYM72_06495 PF00342 Phosphoglucose isomerase GYM72_06510 PF00012 Hsp70 protein GYM72_06515 PF01546 Peptidase family M20/M25/M40 GYM72_06515 PF07687 Peptidase dimerisation domain GYM72_06525 PF00005 ABC transporter GYM72_06540 PF16658 Class II release factor RF3, C-terminal domain GYM72_06540 PF00009 Elongation factor Tu GTP binding domain GYM72_06540 PF03144 Elongation factor Tu domain 2 GYM72_06555 PF00535 Glycosyl transferase family 2 GYM72_06560 PF01928 CYTH domain GYM72_06575 PF00857 Isochorismatase family GYM72_06580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GYM72_06580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GYM72_06585 PF06800 Sugar transport protein GYM72_06595 PF10282 Lactonase, 7-bladed beta-propeller GYM72_06600 PF03952 Enolase, N-terminal domain GYM72_06600 PF00113 Enolase, C-terminal TIM barrel domain GYM72_06605 PF00285 Citrate synthase, C-terminal domain GYM72_06640 PF03781 Sulfatase-modifying factor enzyme 1 GYM72_06650 PF01131 DNA topoisomerase GYM72_06650 PF01751 Toprim domain GYM72_06650 PF13368 Topoisomerase C-terminal repeat GYM72_06655 PF00696 Amino acid kinase family GYM72_06655 PF01842 ACT domain GYM72_06665 PF07733 Bacterial DNA polymerase III alpha NTPase domain GYM72_06665 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GYM72_06665 PF02811 PHP domain GYM72_06665 PF01336 OB-fold nucleic acid binding domain GYM72_06665 PF14579 Helix-hairpin-helix motif GYM72_06680 PF01638 HxlR-like helix-turn-helix GYM72_06710 PF13335 Magnesium chelatase, subunit ChlI C-terminal GYM72_06710 PF01078 Magnesium chelatase, subunit ChlI GYM72_06720 PF00679 Elongation factor G C-terminus GYM72_06720 PF00009 Elongation factor Tu GTP binding domain GYM72_06720 PF03144 Elongation factor Tu domain 2 GYM72_06725 PF00085 Thioredoxin GYM72_06730 PF03099 Biotin/lipoate A/B protein ligase family GYM72_06740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GYM72_06740 PF01872 RibD C-terminal domain GYM72_06745 PF09186 Domain of unknown function (DUF1949) GYM72_06745 PF01205 Uncharacterized protein family UPF0029 GYM72_06750 PF00308 Bacterial dnaA protein GYM72_06750 PF11638 DnaA N-terminal domain GYM72_06750 PF08299 Bacterial dnaA protein helix-turn-helix GYM72_06755 PF01451 Low molecular weight phosphotyrosine protein phosphatase GYM72_06760 PF01106 NifU-like domain GYM72_06765 PF00132 Bacterial transferase hexapeptide (six repeats) GYM72_06770 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GYM72_06775 PF10150 Ribonuclease E/G family GYM72_06775 PF00575 S1 RNA binding domain GYM72_06780 PF00216 Bacterial DNA-binding protein GYM72_06785 PF00730 HhH-GPD superfamily base excision DNA repair protein GYM72_06785 PF14815 NUDIX domain GYM72_06785 PF00633 Helix-hairpin-helix motif GYM72_06790 PF00436 Single-strand binding protein family GYM72_06800 PF03471 Transporter associated domain GYM72_06800 PF01595 Cyclin M transmembrane N-terminal domain GYM72_06800 PF00571 CBS domain GYM72_06820 PF13419 Haloacid dehalogenase-like hydrolase GYM72_06825 PF02397 Bacterial sugar transferase GYM72_06830 PF00909 Ammonium Transporter Family GYM72_06840 PF00152 tRNA synthetases class II (D, K and N) GYM72_06840 PF01336 OB-fold nucleic acid binding domain GYM72_06870 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GYM72_06870 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GYM72_06880 PF01039 Carboxyl transferase domain GYM72_06890 PF09335 SNARE associated Golgi protein GYM72_06895 PF04545 Sigma-70, region 4 GYM72_06895 PF04542 Sigma-70 region 2 GYM72_06910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GYM72_06925 PF03653 Uncharacterised protein family (UPF0093) GYM72_06930 PF07274 Protein of unknown function (DUF1440) GYM72_06935 PF03129 Anticodon binding domain GYM72_06935 PF13393 Histidyl-tRNA synthetase GYM72_06960 PF07992 Pyridine nucleotide-disulphide oxidoreductase GYM72_06960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GYM72_06970 PF03129 Anticodon binding domain GYM72_06975 PF01165 Ribosomal protein S21 GYM72_06980 PF02899 Phage integrase, N-terminal SAM-like domain GYM72_06980 PF00589 Phage integrase family GYM72_06985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GYM72_07010 PF00009 Elongation factor Tu GTP binding domain GYM72_07010 PF03144 Elongation factor Tu domain 2 GYM72_07010 PF03143 Elongation factor Tu C-terminal domain GYM72_07025 PF00467 KOW motif GYM72_07025 PF02357 Transcription termination factor nusG GYM72_07030 PF00298 Ribosomal protein L11, RNA binding domain GYM72_07030 PF03946 Ribosomal protein L11, N-terminal domain GYM72_07035 PF00687 Ribosomal protein L1p/L10e family GYM72_07040 PF00466 Ribosomal protein L10 GYM72_07045 PF16320 Ribosomal protein L7/L12 dimerisation domain GYM72_07045 PF00542 Ribosomal protein L7/L12 C-terminal domain GYM72_07050 PF04565 RNA polymerase Rpb2, domain 3 GYM72_07050 PF04561 RNA polymerase Rpb2, domain 2 GYM72_07050 PF04563 RNA polymerase beta subunit GYM72_07050 PF10385 RNA polymerase beta subunit external 1 domain GYM72_07050 PF04560 RNA polymerase Rpb2, domain 7 GYM72_07050 PF00562 RNA polymerase Rpb2, domain 6 GYM72_07055 PF00623 RNA polymerase Rpb1, domain 2 GYM72_07055 PF04983 RNA polymerase Rpb1, domain 3 GYM72_07055 PF05000 RNA polymerase Rpb1, domain 4 GYM72_07055 PF04998 RNA polymerase Rpb1, domain 5 GYM72_07055 PF04997 RNA polymerase Rpb1, domain 1 GYM72_07065 PF07715 TonB-dependent Receptor Plug Domain GYM72_07065 PF00593 TonB dependent receptor GYM72_07075 PF00156 Phosphoribosyl transferase domain GYM72_07085 PF00459 Inositol monophosphatase family GYM72_07090 PF01791 DeoC/LacD family aldolase GYM72_07095 PF13404 AsnC-type helix-turn-helix domain GYM72_07095 PF01037 Lrp/AsnC ligand binding domain GYM72_07100 PF03741 Integral membrane protein TerC family GYM72_07110 PF00588 SpoU rRNA Methylase family GYM72_07110 PF08032 RNA 2'-O ribose methyltransferase substrate binding GYM72_07115 PF01209 ubiE/COQ5 methyltransferase family GYM72_07120 PF00557 Metallopeptidase family M24 GYM72_07135 PF13520 Amino acid permease GYM72_07140 PF00171 Aldehyde dehydrogenase family GYM72_07145 PF00226 DnaJ domain GYM72_07145 PF01556 DnaJ C terminal domain GYM72_07155 PF00593 TonB dependent receptor GYM72_07155 PF07715 TonB-dependent Receptor Plug Domain GYM72_07160 PF00392 Bacterial regulatory proteins, gntR family GYM72_07160 PF00155 Aminotransferase class I and II GYM72_07165 PF07690 Major Facilitator Superfamily GYM72_07170 PF00248 Aldo/keto reductase family GYM72_07175 PF00534 Glycosyl transferases group 1 GYM72_07180 PF02424 ApbE family GYM72_07185 PF00667 FAD binding domain GYM72_07185 PF00258 Flavodoxin GYM72_07185 PF00175 Oxidoreductase NAD-binding domain GYM72_07210 PF00593 TonB dependent receptor GYM72_07210 PF07715 TonB-dependent Receptor Plug Domain GYM72_07220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GYM72_07220 PF02403 Seryl-tRNA synthetase N-terminal domain GYM72_07225 PF02657 Fe-S metabolism associated domain GYM72_07235 PF00364 Biotin-requiring enzyme GYM72_07235 PF02779 Transketolase, pyrimidine binding domain GYM72_07235 PF02780 Transketolase, C-terminal domain GYM72_07240 PF10431 C-terminal, D2-small domain, of ClpB protein GYM72_07240 PF07724 AAA domain (Cdc48 subfamily) GYM72_07240 PF06689 ClpX C4-type zinc finger GYM72_07260 PF00270 DEAD/DEAH box helicase GYM72_07260 PF17191 RecG wedge domain GYM72_07260 PF00271 Helicase conserved C-terminal domain GYM72_07265 PF01098 Cell cycle protein GYM72_07270 PF00905 Penicillin binding protein transpeptidase domain GYM72_07270 PF03717 Penicillin-binding Protein dimerisation domain GYM72_07275 PF04085 rod shape-determining protein MreC GYM72_07285 PF01343 Peptidase family S49 GYM72_07290 PF00809 Pterin binding enzyme GYM72_07290 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GYM72_07295 PF00691 OmpA family GYM72_07300 PF01196 Ribosomal protein L17 GYM72_07305 PF01000 RNA polymerase Rpb3/RpoA insert domain GYM72_07305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GYM72_07305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GYM72_07310 PF00163 Ribosomal protein S4/S9 N-terminal domain GYM72_07310 PF01479 S4 domain GYM72_07315 PF00411 Ribosomal protein S11 GYM72_07320 PF00416 Ribosomal protein S13/S18 GYM72_07325 PF00444 Ribosomal protein L36 GYM72_07330 PF01176 Translation initiation factor 1A / IF-1 GYM72_07335 PF00344 SecY translocase GYM72_07340 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GYM72_07345 PF00327 Ribosomal protein L30p/L7e GYM72_07350 PF00333 Ribosomal protein S5, N-terminal domain GYM72_07350 PF03719 Ribosomal protein S5, C-terminal domain GYM72_07355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GYM72_07360 PF00347 Ribosomal protein L6 GYM72_07365 PF00410 Ribosomal protein S8 GYM72_07370 PF00253 Ribosomal protein S14p/S29e GYM72_07375 PF00673 ribosomal L5P family C-terminus GYM72_07375 PF00281 Ribosomal protein L5 GYM72_07380 PF00467 KOW motif GYM72_07380 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GYM72_07385 PF00238 Ribosomal protein L14p/L23e GYM72_07390 PF00366 Ribosomal protein S17 GYM72_07395 PF00831 Ribosomal L29 protein GYM72_07400 PF00252 Ribosomal protein L16p/L10e GYM72_07405 PF07650 KH domain GYM72_07405 PF00189 Ribosomal protein S3, C-terminal domain GYM72_07410 PF00237 Ribosomal protein L22p/L17e GYM72_07415 PF00203 Ribosomal protein S19 GYM72_07420 PF03947 Ribosomal Proteins L2, C-terminal domain GYM72_07420 PF00181 Ribosomal Proteins L2, RNA binding domain GYM72_07425 PF00276 Ribosomal protein L23 GYM72_07430 PF00573 Ribosomal protein L4/L1 family GYM72_07435 PF00297 Ribosomal protein L3 GYM72_07440 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GYM72_07440 PF00326 Prolyl oligopeptidase family GYM72_07445 PF01467 Cytidylyltransferase-like GYM72_07445 PF00294 pfkB family carbohydrate kinase GYM72_07460 PF02416 mttA/Hcf106 family GYM72_07475 PF00483 Nucleotidyl transferase GYM72_07480 PF00692 dUTPase GYM72_07490 PF05872 Bacterial protein of unknown function (DUF853) GYM72_07495 PF14480 DNA polymerase III polC-type N-terminus I GYM72_07495 PF07733 Bacterial DNA polymerase III alpha NTPase domain GYM72_07495 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GYM72_07495 PF11490 DNA polymerase III polC-type N-terminus II GYM72_07495 PF02811 PHP domain GYM72_07495 PF00929 Exonuclease GYM72_07495 PF14579 Helix-hairpin-helix motif GYM72_07500 PF00762 Ferrochelatase GYM72_07515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GYM72_07515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GYM72_07540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GYM72_07540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GYM72_07585 PF02574 Homocysteine S-methyltransferase GYM72_07585 PF00809 Pterin binding enzyme GYM72_07585 PF02965 Vitamin B12 dependent methionine synthase, activation domain GYM72_07585 PF02607 B12 binding domain GYM72_07585 PF02310 B12 binding domain GYM72_07590 PF00486 Transcriptional regulatory protein, C terminal GYM72_07590 PF00072 Response regulator receiver domain GYM72_07595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GYM72_07595 PF00512 His Kinase A (phospho-acceptor) domain GYM72_07595 PF18719 ArlS sensor domain GYM72_07605 PF00873 AcrB/AcrD/AcrF family GYM72_07615 PF01207 Dihydrouridine synthase (Dus) GYM72_07625 PF04264 YceI-like domain GYM72_07630 PF02965 Vitamin B12 dependent methionine synthase, activation domain GYM72_07630 PF02607 B12 binding domain GYM72_07630 PF02310 B12 binding domain GYM72_07630 PF02574 Homocysteine S-methyltransferase GYM72_07630 PF00809 Pterin binding enzyme GYM72_07640 PF09335 SNARE associated Golgi protein GYM72_07645 PF00375 Sodium:dicarboxylate symporter family GYM72_07665 PF00005 ABC transporter GYM72_07670 PF00005 ABC transporter GYM72_07675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GYM72_07690 PF00676 Dehydrogenase E1 component GYM72_07695 PF00364 Biotin-requiring enzyme GYM72_07695 PF02817 e3 binding domain GYM72_07695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GYM72_07700 PF00334 Nucleoside diphosphate kinase GYM72_07705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GYM72_07710 PF02219 Methylenetetrahydrofolate reductase GYM72_07715 PF02152 Dihydroneopterin aldolase GYM72_07725 PF00551 Formyl transferase GYM72_07725 PF02911 Formyl transferase, C-terminal domain GYM72_07725 PF00378 Enoyl-CoA hydratase/isomerase GYM72_07730 PF00108 Thiolase, N-terminal domain GYM72_07730 PF02803 Thiolase, C-terminal domain GYM72_07735 PF00111 2Fe-2S iron-sulfur cluster binding domain GYM72_07735 PF00970 Oxidoreductase FAD-binding domain GYM72_07735 PF00175 Oxidoreductase NAD-binding domain GYM72_07745 PF07690 Major Facilitator Superfamily GYM72_07765 PF01634 ATP phosphoribosyltransferase GYM72_07765 PF08029 HisG, C-terminal domain GYM72_07770 PF00815 Histidinol dehydrogenase GYM72_07775 PF00155 Aminotransferase class I and II GYM72_07780 PF00475 Imidazoleglycerol-phosphate dehydratase GYM72_07785 PF00117 Glutamine amidotransferase class-I GYM72_07790 PF00977 Histidine biosynthesis protein GYM72_07795 PF00977 Histidine biosynthesis protein GYM72_07800 PF01502 Phosphoribosyl-AMP cyclohydrolase GYM72_07800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GYM72_07805 PF00533 BRCA1 C Terminus (BRCT) domain GYM72_07805 PF01653 NAD-dependent DNA ligase adenylation domain GYM72_07805 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GYM72_07805 PF12826 Helix-hairpin-helix motif GYM72_07805 PF03120 NAD-dependent DNA ligase OB-fold domain GYM72_07820 PF12848 ABC transporter GYM72_07820 PF16326 ABC transporter C-terminal domain GYM72_07820 PF00005 ABC transporter GYM72_07825 PF01925 Sulfite exporter TauE/SafE GYM72_07845 PF01553 Acyltransferase GYM72_07850 PF01238 Phosphomannose isomerase type I GYM72_07855 PF03575 Peptidase family S51 GYM72_07865 PF01544 CorA-like Mg2+ transporter protein GYM72_07870 PF00152 tRNA synthetases class II (D, K and N) GYM72_07870 PF02938 GAD domain GYM72_07870 PF01336 OB-fold nucleic acid binding domain GYM72_07895 PF00535 Glycosyl transferase family 2 GYM72_07900 PF00056 lactate/malate dehydrogenase, NAD binding domain GYM72_07900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GYM72_07905 PF01225 Mur ligase family, catalytic domain GYM72_07905 PF02875 Mur ligase family, glutamate ligase domain GYM72_07905 PF08245 Mur ligase middle domain GYM72_07920 PF01103 Surface antigen GYM72_07920 PF07244 Surface antigen variable number repeat GYM72_07925 PF01255 Putative undecaprenyl diphosphate synthase GYM72_07935 PF00348 Polyprenyl synthetase GYM72_07940 PF00326 Prolyl oligopeptidase family GYM72_07940 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GYM72_07950 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GYM72_07955 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GYM72_07960 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GYM72_07965 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GYM72_07970 PF00593 TonB dependent receptor GYM72_07970 PF07715 TonB-dependent Receptor Plug Domain GYM72_07990 PF00873 AcrB/AcrD/AcrF family GYM72_08000 PF02397 Bacterial sugar transferase GYM72_08035 PF04321 RmlD substrate binding domain GYM72_08040 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GYM72_08050 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GYM72_08055 PF01926 50S ribosome-binding GTPase GYM72_08055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GYM72_08080 PF00037 4Fe-4S binding domain GYM72_08080 PF13247 4Fe-4S dicluster domain GYM72_08085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GYM72_08090 PF09115 DNA polymerase III, delta subunit, C terminal GYM72_08095 PF03796 DnaB-like helicase C terminal domain GYM72_08095 PF00772 DnaB-like helicase N terminal domain GYM72_08100 PF00453 Ribosomal protein L20 GYM72_08105 PF01632 Ribosomal protein L35 GYM72_08115 PF05198 Translation initiation factor IF-3, N-terminal domain GYM72_08115 PF00707 Translation initiation factor IF-3, C-terminal domain GYM72_08120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GYM72_08120 PF02824 TGS domain GYM72_08120 PF03129 Anticodon binding domain GYM72_08120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GYM72_08125 PF04073 Aminoacyl-tRNA editing domain GYM72_08130 PF01979 Amidohydrolase family GYM72_08135 PF00893 Small Multidrug Resistance protein GYM72_08140 PF05496 Holliday junction DNA helicase RuvB P-loop domain GYM72_08140 PF05491 RuvB C-terminal winged helix domain GYM72_08140 PF17864 RuvB AAA lid domain GYM72_08145 PF00361 Proton-conducting membrane transporter GYM72_08150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GYM72_08150 PF00361 Proton-conducting membrane transporter GYM72_08155 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GYM72_08160 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GYM72_08165 PF12838 4Fe-4S dicluster domain GYM72_08170 PF00146 NADH dehydrogenase GYM72_08175 PF00384 Molybdopterin oxidoreductase GYM72_08175 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GYM72_08175 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GYM72_08185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GYM72_08185 PF10531 SLBB domain GYM72_08185 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GYM72_08215 PF00893 Small Multidrug Resistance protein GYM72_08220 PF03447 Homoserine dehydrogenase, NAD binding domain GYM72_08220 PF00742 Homoserine dehydrogenase GYM72_08220 PF00696 Amino acid kinase family GYM72_08225 PF00288 GHMP kinases N terminal domain GYM72_08225 PF08544 GHMP kinases C terminal GYM72_08230 PF14821 Threonine synthase N terminus GYM72_08230 PF00291 Pyridoxal-phosphate dependent enzyme GYM72_08235 PF00696 Amino acid kinase family GYM72_08240 PF01765 Ribosome recycling factor GYM72_08245 PF02153 Prephenate dehydrogenase GYM72_08245 PF01842 ACT domain GYM72_08255 PF01746 tRNA (Guanine-1)-methyltransferase GYM72_08275 PF01037 Lrp/AsnC ligand binding domain GYM72_08275 PF13404 AsnC-type helix-turn-helix domain GYM72_08280 PF00520 Ion transport protein GYM72_08280 PF00027 Cyclic nucleotide-binding domain GYM72_08285 PF14437 MafB19-like deaminase GYM72_08290 PF01384 Phosphate transporter family GYM72_08300 PF01807 CHC2 zinc finger GYM72_08300 PF08275 DNA primase catalytic core, N-terminal domain GYM72_08300 PF10410 DnaB-helicase binding domain of primase GYM72_08310 PF09382 RQC domain GYM72_08310 PF16124 RecQ zinc-binding GYM72_08310 PF00570 HRDC domain GYM72_08310 PF00271 Helicase conserved C-terminal domain GYM72_08310 PF00270 DEAD/DEAH box helicase GYM72_08315 PF03167 Uracil DNA glycosylase superfamily GYM72_08345 PF12848 ABC transporter GYM72_08345 PF00005 ABC transporter GYM72_08345 PF16326 ABC transporter C-terminal domain GYM72_08355 PF00403 Heavy-metal-associated domain GYM72_08365 PF00115 Cytochrome C and Quinol oxidase polypeptide I GYM72_08370 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GYM72_08370 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GYM72_08375 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GYM72_08375 PF12801 4Fe-4S binding domain GYM72_08375 PF13746 4Fe-4S dicluster domain GYM72_08390 PF02405 Permease MlaE GYM72_08395 PF00005 ABC transporter GYM72_08400 PF00483 Nucleotidyl transferase GYM72_08400 PF01050 Mannose-6-phosphate isomerase GYM72_08410 PF04468 PSP1 C-terminal conserved region GYM72_08420 PF00912 Transglycosylase GYM72_08420 PF17092 Penicillin-binding protein OB-like domain GYM72_08420 PF00905 Penicillin binding protein transpeptidase domain GYM72_08430 PF00593 TonB dependent receptor GYM72_08430 PF07715 TonB-dependent Receptor Plug Domain GYM72_08450 PF03309 Type III pantothenate kinase GYM72_08460 PF01208 Uroporphyrinogen decarboxylase (URO-D) GYM72_08470 PF08402 TOBE domain GYM72_08470 PF00005 ABC transporter GYM72_08475 PF01751 Toprim domain GYM72_08475 PF01131 DNA topoisomerase GYM72_08480 PF01741 Large-conductance mechanosensitive channel, MscL GYM72_08495 PF09180 Prolyl-tRNA synthetase, C-terminal GYM72_08495 PF03129 Anticodon binding domain GYM72_08495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GYM72_08500 PF02390 Putative methyltransferase GYM72_08500 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GYM72_08505 PF04452 RNA methyltransferase GYM72_08510 PF01883 Iron-sulfur cluster assembly protein GYM72_08515 PF06491 Disulphide isomerase GYM72_08520 PF00825 Ribonuclease P GYM72_08540 PF07584 Aerotolerance regulator N-terminal GYM72_08540 PF00092 von Willebrand factor type A domain GYM72_08545 PF13519 von Willebrand factor type A domain GYM72_08545 PF07584 Aerotolerance regulator N-terminal GYM72_08555 PF01882 Protein of unknown function DUF58 GYM72_08560 PF07726 ATPase family associated with various cellular activities (AAA) GYM72_08560 PF17863 AAA lid domain GYM72_08565 PF04055 Radical SAM superfamily GYM72_08575 PF01790 Prolipoprotein diacylglyceryl transferase GYM72_08580 PF01809 Putative membrane protein insertion efficiency factor GYM72_08585 PF01136 Peptidase family U32 GYM72_08595 PF01812 5-formyltetrahydrofolate cyclo-ligase family GYM72_08625 PF01145 SPFH domain / Band 7 family GYM72_08630 PF00472 RF-1 domain GYM72_08630 PF03462 PCRF domain GYM72_08645 PF00549 CoA-ligase GYM72_08645 PF08442 ATP-grasp domain GYM72_08650 PF01640 Peptidase C10 family GYM72_08650 PF13734 Spi protease inhibitor GYM72_08655 PF13734 Spi protease inhibitor GYM72_08655 PF01640 Peptidase C10 family GYM72_08660 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region GYM72_08660 PF00326 Prolyl oligopeptidase family GYM72_08660 PF07676 WD40-like Beta Propeller Repeat GYM72_08665 PF00300 Histidine phosphatase superfamily (branch 1) GYM72_08680 PF01649 Ribosomal protein S20 GYM72_08695 PF02875 Mur ligase family, glutamate ligase domain GYM72_08695 PF08245 Mur ligase middle domain GYM72_08705 PF06965 Na+/H+ antiporter 1 GYM72_08710 PF00675 Insulinase (Peptidase family M16) GYM72_08710 PF05193 Peptidase M16 inactive domain GYM72_08715 PF01300 Telomere recombination GYM72_08720 PF01641 SelR domain GYM72_08725 PF01594 AI-2E family transporter GYM72_08730 PF01220 Dehydroquinase class II GYM72_08750 PF00881 Nitroreductase family GYM72_08755 PF01047 MarR family GYM72_08760 PF00005 ABC transporter GYM72_08760 PF09383 NIL domain GYM72_08765 PF00528 Binding-protein-dependent transport system inner membrane component GYM72_08770 PF03180 NLPA lipoprotein GYM72_08775 PF00912 Transglycosylase GYM72_08790 PF01118 Semialdehyde dehydrogenase, NAD binding domain GYM72_08790 PF02774 Semialdehyde dehydrogenase, dimerisation domain GYM72_08795 PF00005 ABC transporter GYM72_08795 PF00664 ABC transporter transmembrane region GYM72_08805 PF00877 NlpC/P60 family GYM72_08820 PF13567 Domain of unknown function (DUF4131) GYM72_08820 PF00753 Metallo-beta-lactamase superfamily GYM72_08820 PF03772 Competence protein GYM72_08835 PF00924 Mechanosensitive ion channel GYM72_08845 PF00753 Metallo-beta-lactamase superfamily GYM72_08850 PF01515 Phosphate acetyl/butaryl transferase GYM72_08850 PF07085 DRTGG domain GYM72_08855 PF03099 Biotin/lipoate A/B protein ligase family GYM72_08855 PF12706 Beta-lactamase superfamily domain GYM72_08870 PF00202 Aminotransferase class-III GYM72_08880 PF00291 Pyridoxal-phosphate dependent enzyme GYM72_08885 PF00854 POT family GYM72_08890 PF00854 POT family GYM72_08920 PF00368 Hydroxymethylglutaryl-coenzyme A reductase GYM72_08925 PF05970 PIF1-like helicase GYM72_08925 PF14493 Helix-turn-helix domain GYM72_08995 PF04002 RadC-like JAB domain GYM72_09055 PF01510 N-acetylmuramoyl-L-alanine amidase GYM72_09060 PF01926 50S ribosome-binding GTPase GYM72_09060 PF07650 KH domain GYM72_09070 PF07497 Rho termination factor, RNA-binding domain GYM72_09070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GYM72_09085 PF02075 Crossover junction endodeoxyribonuclease RuvC GYM72_09090 PF00156 Phosphoribosyl transferase domain GYM72_09090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GYM72_09100 PF10141 Single-strand DNA-specific exonuclease, C terminal domain GYM72_09100 PF17768 RecJ OB domain GYM72_09100 PF02272 DHHA1 domain GYM72_09100 PF01368 DHH family GYM72_09105 PF01467 Cytidylyltransferase-like GYM72_09110 PF04055 Radical SAM superfamily GYM72_09115 PF00578 AhpC/TSA family GYM72_09115 PF10417 C-terminal domain of 1-Cys peroxiredoxin GYM72_09130 PF00639 PPIC-type PPIASE domain GYM72_09130 PF09312 SurA N-terminal domain GYM72_09135 PF00490 Delta-aminolevulinic acid dehydratase GYM72_09150 PF02540 NAD synthase GYM72_09155 PF01709 Transcriptional regulator GYM72_09165 PF14310 Fibronectin type III-like domain GYM72_09165 PF01915 Glycosyl hydrolase family 3 C-terminal domain GYM72_09165 PF00933 Glycosyl hydrolase family 3 N terminal domain GYM72_09170 PF01168 Alanine racemase, N-terminal domain GYM72_09175 PF02872 5'-nucleotidase, C-terminal domain GYM72_09175 PF00149 Calcineurin-like phosphoesterase GYM72_09185 PF00884 Sulfatase GYM72_09190 PF01370 NAD dependent epimerase/dehydratase family GYM72_09195 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GYM72_09195 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GYM72_09195 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GYM72_09200 PF00535 Glycosyl transferase family 2 GYM72_09200 PF01501 Glycosyl transferase family 8 GYM72_09205 PF00535 Glycosyl transferase family 2 GYM72_09210 PF14524 Wzt C-terminal domain GYM72_09210 PF00005 ABC transporter GYM72_09220 PF00483 Nucleotidyl transferase GYM72_09230 PF16363 GDP-mannose 4,6 dehydratase GYM72_09235 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GYM72_09235 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GYM72_09235 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GYM72_09250 PF01938 TRAM domain GYM72_09250 PF05958 tRNA (Uracil-5-)-methyltransferase GYM72_09255 PF00155 Aminotransferase class I and II GYM72_09260 PF07411 Domain of unknown function (DUF1508) GYM72_09265 PF08032 RNA 2'-O ribose methyltransferase substrate binding GYM72_09265 PF00588 SpoU rRNA Methylase family GYM72_09270 PF00545 ribonuclease GYM72_09275 PF01337 Barstar (barnase inhibitor) GYM72_09280 PF00535 Glycosyl transferase family 2 GYM72_09295 PF00326 Prolyl oligopeptidase family GYM72_09295 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region GYM72_09315 PF03788 LrgA family GYM72_09320 PF04172 LrgB-like family GYM72_09325 PF08206 Ribonuclease B OB domain GYM72_09325 PF00773 RNB domain GYM72_09325 PF00575 S1 RNA binding domain GYM72_09325 PF17876 Cold shock domain GYM72_09335 PF00290 Tryptophan synthase alpha chain GYM72_09340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GYM72_09345 PF00218 Indole-3-glycerol phosphate synthase GYM72_09355 PF00591 Glycosyl transferase family, a/b domain GYM72_09355 PF02885 Glycosyl transferase family, helical bundle domain GYM72_09360 PF02885 Glycosyl transferase family, helical bundle domain GYM72_09360 PF00591 Glycosyl transferase family, a/b domain GYM72_09360 PF00117 Glutamine amidotransferase class-I GYM72_09365 PF00857 Isochorismatase family GYM72_09370 PF00425 chorismate binding enzyme GYM72_09370 PF04715 Anthranilate synthase component I, N terminal region GYM72_09375 PF00291 Pyridoxal-phosphate dependent enzyme GYM72_09380 PF05736 OprF membrane domain GYM72_09380 PF00691 OmpA family GYM72_09390 PF01502 Phosphoribosyl-AMP cyclohydrolase GYM72_09390 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GYM72_09395 PF01618 MotA/TolQ/ExbB proton channel family GYM72_09400 PF02472 Biopolymer transport protein ExbD/TolR GYM72_09410 PF01458 Uncharacterized protein family (UPF0051) GYM72_09420 PF01521 Iron-sulphur cluster biosynthesis GYM72_09425 PF00561 alpha/beta hydrolase fold GYM72_09430 PF13677 Membrane MotB of proton-channel complex MotA/MotB GYM72_09430 PF00691 OmpA family GYM72_09440 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GYM72_09450 PF00885 6,7-dimethyl-8-ribityllumazine synthase GYM72_09455 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GYM72_09455 PF03900 Porphobilinogen deaminase, C-terminal domain GYM72_09460 PF01488 Shikimate / quinate 5-dehydrogenase GYM72_09460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GYM72_09460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GYM72_09475 PF10576 Iron-sulfur binding domain of endonuclease III GYM72_09475 PF00633 Helix-hairpin-helix motif GYM72_09475 PF00730 HhH-GPD superfamily base excision DNA repair protein GYM72_09480 PF04241 Protein of unknown function (DUF423) GYM72_09490 PF00132 Bacterial transferase hexapeptide (six repeats) GYM72_09490 PF14602 Hexapeptide repeat of succinyl-transferase GYM72_09490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GYM72_09495 PF00005 ABC transporter GYM72_09495 PF00664 ABC transporter transmembrane region GYM72_09500 PF01416 tRNA pseudouridine synthase GYM72_09515 PF13673 Acetyltransferase (GNAT) domain GYM72_09520 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GYM72_09525 PF00742 Homoserine dehydrogenase GYM72_09525 PF03447 Homoserine dehydrogenase, NAD binding domain GYM72_09525 PF00696 Amino acid kinase family GYM72_09535 PF00162 Phosphoglycerate kinase GYM72_09545 PF01134 Glucose inhibited division protein A GYM72_09545 PF13932 GidA associated domain GYM72_09550 PF02130 Uncharacterized protein family UPF0054 GYM72_09555 PF01734 Patatin-like phospholipase GYM72_09560 PF13439 Glycosyltransferase Family 4 GYM72_09560 PF00534 Glycosyl transferases group 1 GYM72_09565 PF00535 Glycosyl transferase family 2 GYM72_09575 PF00534 Glycosyl transferases group 1 GYM72_09575 PF13439 Glycosyltransferase Family 4 GYM72_09580 PF00534 Glycosyl transferases group 1 GYM72_09655 PF00083 Sugar (and other) transporter GYM72_09660 PF00356 Bacterial regulatory proteins, lacI family GYM72_09665 PF00294 pfkB family carbohydrate kinase GYM72_09670 PF05681 Fumarate hydratase (Fumerase) GYM72_09670 PF05683 Fumarase C-terminus GYM72_09675 PF00120 Glutamine synthetase, catalytic domain GYM72_09675 PF18318 Glutamine synthetase C-terminal domain GYM72_09675 PF12437 Glutamine synthetase type III N terminal GYM72_09680 PF00248 Aldo/keto reductase family GYM72_09685 PF00106 short chain dehydrogenase GYM72_09690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GYM72_09690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GYM72_09705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GYM72_09705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GYM72_09720 PF03009 Glycerophosphoryl diester phosphodiesterase family GYM72_09725 PF07690 Major Facilitator Superfamily GYM72_09730 PF01266 FAD dependent oxidoreductase GYM72_09730 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GYM72_09735 PF00455 DeoR C terminal sensor domain GYM72_09735 PF08220 DeoR-like helix-turn-helix domain GYM72_09740 PF13183 4Fe-4S dicluster domain GYM72_09740 PF02754 Cysteine-rich domain GYM72_09745 PF00890 FAD binding domain GYM72_09750 PF01266 FAD dependent oxidoreductase GYM72_09750 PF04324 BFD-like [2Fe-2S] binding domain GYM72_09755 PF00378 Enoyl-CoA hydratase/isomerase GYM72_09760 PF00324 Amino acid permease GYM72_09765 PF00561 alpha/beta hydrolase fold GYM72_09770 PF02684 Lipid-A-disaccharide synthetase GYM72_09780 PF00814 Glycoprotease family GYM72_09795 PF01702 Queuine tRNA-ribosyltransferase GYM72_09830 PF13395 HNH endonuclease GYM72_09830 PF18470 Cas9 alpha-helical lobe domain GYM72_09830 PF18541 RuvC endonuclease subdomain 3