locus-tag class description LDX55_00005 PF00308 Bacterial dnaA protein LDX55_00005 PF08299 Bacterial dnaA protein helix-turn-helix LDX55_00005 PF11638 DnaA N-terminal domain LDX55_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LDX55_00010 PF02767 DNA polymerase III beta subunit, central domain LDX55_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LDX55_00015 PF01321 Creatinase/Prolidase N-terminal domain LDX55_00015 PF00557 Metallopeptidase family M24 LDX55_00025 PF02463 RecF/RecN/SMC N terminal domain LDX55_00030 PF01751 Toprim domain LDX55_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDX55_00030 PF00204 DNA gyrase B LDX55_00030 PF00986 DNA gyrase B subunit, carboxyl terminus LDX55_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller LDX55_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A LDX55_00050 PF01250 Ribosomal protein S6 LDX55_00055 PF00436 Single-strand binding protein family LDX55_00060 PF01084 Ribosomal protein S18 LDX55_00065 PF01368 DHH family LDX55_00065 PF02272 DHHA1 domain LDX55_00070 PF01281 Ribosomal protein L9, N-terminal domain LDX55_00070 PF03948 Ribosomal protein L9, C-terminal domain LDX55_00075 PF03796 DnaB-like helicase C terminal domain LDX55_00075 PF00772 DnaB-like helicase N terminal domain LDX55_00090 PF13276 HTH-like domain LDX55_00090 PF00665 Integrase core domain LDX55_00090 PF13333 Integrase core domain LDX55_00100 PF03551 Transcriptional regulator PadR-like family LDX55_00105 PF01979 Amidohydrolase family LDX55_00110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_00115 PF00155 Aminotransferase class I and II LDX55_00120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDX55_00120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDX55_00125 PF01047 MarR family LDX55_00130 PF13673 Acetyltransferase (GNAT) domain LDX55_00140 PF00206 Lyase LDX55_00140 PF10415 Fumarase C C-terminus LDX55_00145 PF01458 Uncharacterized protein family (UPF0051) LDX55_00155 PF00266 Aminotransferase class-V LDX55_00160 PF01458 Uncharacterized protein family (UPF0051) LDX55_00165 PF00005 ABC transporter LDX55_00175 PF03477 ATP cone domain LDX55_00175 PF13597 Anaerobic ribonucleoside-triphosphate reductase LDX55_00185 PF00665 Integrase core domain LDX55_00185 PF13333 Integrase core domain LDX55_00195 PF00999 Sodium/hydrogen exchanger family LDX55_00210 PF13673 Acetyltransferase (GNAT) domain LDX55_00220 PF00999 Sodium/hydrogen exchanger family LDX55_00235 PF00072 Response regulator receiver domain LDX55_00235 PF00486 Transcriptional regulatory protein, C terminal LDX55_00240 PF14827 Double sensory domain of two-component sensor kinase LDX55_00240 PF00672 HAMP domain LDX55_00240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDX55_00240 PF00512 His Kinase A (phospho-acceptor) domain LDX55_00240 PF13426 PAS domain LDX55_00255 PF00753 Metallo-beta-lactamase superfamily LDX55_00260 PF13180 PDZ domain LDX55_00275 PF13333 Integrase core domain LDX55_00275 PF00665 Integrase core domain LDX55_00295 PF01979 Amidohydrolase family LDX55_00295 PF13382 Adenine deaminase C-terminal domain LDX55_00300 PF01566 Natural resistance-associated macrophage protein LDX55_00305 PF00582 Universal stress protein family LDX55_00315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDX55_00315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDX55_00320 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDX55_00320 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDX55_00325 PF00106 short chain dehydrogenase LDX55_00340 PF03632 Glycosyl hydrolase family 65 central catalytic domain LDX55_00340 PF03633 Glycosyl hydrolase family 65, C-terminal domain LDX55_00340 PF03636 Glycosyl hydrolase family 65, N-terminal domain LDX55_00345 PF13419 Haloacid dehalogenase-like hydrolase LDX55_00350 PF02110 Hydroxyethylthiazole kinase family LDX55_00355 PF02581 Thiamine monophosphate synthase LDX55_00360 PF08543 Phosphomethylpyrimidine kinase LDX55_00365 PF03070 TENA/THI-4/PQQC family LDX55_00375 PF03734 L,D-transpeptidase catalytic domain LDX55_00390 PF00108 Thiolase, N-terminal domain LDX55_00390 PF02803 Thiolase, C-terminal domain LDX55_00410 PF00375 Sodium:dicarboxylate symporter family LDX55_00415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDX55_00415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDX55_00415 PF02142 MGS-like domain LDX55_00420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDX55_00420 PF00117 Glutamine amidotransferase class-I LDX55_00425 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDX55_00425 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDX55_00430 PF01960 ArgJ family LDX55_00435 PF00696 Amino acid kinase family LDX55_00440 PF00202 Aminotransferase class-III LDX55_00445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDX55_00445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDX55_00450 PF07731 Multicopper oxidase LDX55_00450 PF07732 Multicopper oxidase LDX55_00455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDX55_00455 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LDX55_00460 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LDX55_00460 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LDX55_00465 PF07690 Major Facilitator Superfamily LDX55_00470 PF07972 NrdI Flavodoxin like LDX55_00475 PF00571 CBS domain LDX55_00475 PF03471 Transporter associated domain LDX55_00475 PF01595 Cyclin M transmembrane N-terminal domain LDX55_00500 PF00535 Glycosyl transferase family 2 LDX55_00505 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase LDX55_00515 PF00072 Response regulator receiver domain LDX55_00515 PF00486 Transcriptional regulatory protein, C terminal LDX55_00520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDX55_00520 PF00512 His Kinase A (phospho-acceptor) domain LDX55_00530 PF00011 Hsp20/alpha crystallin family LDX55_00535 PF00011 Hsp20/alpha crystallin family LDX55_00620 PF13302 Acetyltransferase (GNAT) domain LDX55_00630 PF13411 MerR HTH family regulatory protein LDX55_00635 PF07690 Major Facilitator Superfamily LDX55_00665 PF00665 Integrase core domain LDX55_00665 PF13333 Integrase core domain LDX55_00665 PF13276 HTH-like domain LDX55_00670 PF00480 ROK family LDX55_00675 PF00342 Phosphoglucose isomerase LDX55_00680 PF00480 ROK family LDX55_00685 PF00251 Glycosyl hydrolases family 32 N-terminal domain LDX55_00685 PF08244 Glycosyl hydrolases family 32 C terminal LDX55_00690 PF03551 Transcriptional regulator PadR-like family LDX55_00730 PF13333 Integrase core domain LDX55_00730 PF13276 HTH-like domain LDX55_00730 PF00665 Integrase core domain LDX55_00735 PF08240 Alcohol dehydrogenase GroES-like domain LDX55_00735 PF13823 Alcohol dehydrogenase GroES-associated LDX55_00735 PF00107 Zinc-binding dehydrogenase LDX55_00740 PF13520 Amino acid permease LDX55_00780 PF00005 ABC transporter LDX55_00790 PF00248 Aldo/keto reductase family LDX55_00795 PF13411 MerR HTH family regulatory protein LDX55_00805 PF02237 Biotin protein ligase C terminal domain LDX55_00805 PF08279 HTH domain LDX55_00805 PF03099 Biotin/lipoate A/B protein ligase family LDX55_00815 PF13411 MerR HTH family regulatory protein LDX55_00825 PF02627 Carboxymuconolactone decarboxylase family LDX55_00835 PF02632 BioY family LDX55_00850 PF00464 Serine hydroxymethyltransferase LDX55_00860 PF00248 Aldo/keto reductase family LDX55_00875 PF01966 HD domain LDX55_00880 PF04073 Aminoacyl-tRNA editing domain LDX55_00895 PF00392 Bacterial regulatory proteins, gntR family LDX55_00895 PF07702 UTRA domain LDX55_00900 PF09363 XFP C-terminal domain LDX55_00900 PF09364 XFP N-terminal domain LDX55_00900 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LDX55_00905 PF00849 RNA pseudouridylate synthase LDX55_00905 PF01479 S4 domain LDX55_00925 PF00909 Ammonium Transporter Family LDX55_00940 PF01966 HD domain LDX55_00940 PF00013 KH domain LDX55_00940 PF12072 Domain of unknown function (DUF3552) LDX55_00945 PF02872 5'-nucleotidase, C-terminal domain LDX55_00945 PF00149 Calcineurin-like phosphoesterase LDX55_00950 PF03960 ArsC family LDX55_00960 PF01156 Inosine-uridine preferring nucleoside hydrolase LDX55_00970 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDX55_00980 PF00884 Sulfatase LDX55_00990 PF00300 Histidine phosphatase superfamily (branch 1) LDX55_00995 PF08239 Bacterial SH3 domain LDX55_00995 PF01476 LysM domain LDX55_00995 PF00877 NlpC/P60 family LDX55_01005 PF13457 GW (Gly-Tryp) dipeptide domain LDX55_01005 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDX55_01010 PF03741 Integral membrane protein TerC family LDX55_01015 PF00085 Thioredoxin LDX55_01020 PF03553 Na+/H+ antiporter family LDX55_01030 PF01476 LysM domain LDX55_01030 PF06725 3D domain LDX55_01040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LDX55_01040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LDX55_01045 PF01979 Amidohydrolase family LDX55_01050 PF00117 Glutamine amidotransferase class-I LDX55_01050 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDX55_01055 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDX55_01055 PF02142 MGS-like domain LDX55_01055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDX55_01060 PF01180 Dihydroorotate dehydrogenase LDX55_01065 PF04203 Sortase domain LDX55_01070 PF00478 IMP dehydrogenase / GMP reductase domain LDX55_01075 PF00709 Adenylosuccinate synthetase LDX55_01080 PF00206 Lyase LDX55_01080 PF10397 Adenylosuccinate lyase C-terminus LDX55_01110 PF13350 Tyrosine phosphatase family LDX55_01150 PF13439 Glycosyltransferase Family 4 LDX55_01150 PF00534 Glycosyl transferases group 1 LDX55_01155 PF00534 Glycosyl transferases group 1 LDX55_01170 PF01938 TRAM domain LDX55_01170 PF05958 tRNA (Uracil-5-)-methyltransferase LDX55_01180 PF13333 Integrase core domain LDX55_01180 PF00665 Integrase core domain LDX55_01180 PF13276 HTH-like domain LDX55_01200 PF13673 Acetyltransferase (GNAT) domain LDX55_01220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDX55_01220 PF03466 LysR substrate binding domain LDX55_01260 PF01676 Metalloenzyme superfamily LDX55_01265 PF07662 Na+ dependent nucleoside transporter C-terminus LDX55_01265 PF01773 Na+ dependent nucleoside transporter N-terminus LDX55_01270 PF00860 Permease family LDX55_01275 PF02527 rRNA small subunit methyltransferase G LDX55_01280 PF13614 AAA domain LDX55_01285 PF02195 ParB-like nuclease domain LDX55_01285 PF17762 HTH domain found in ParB protein LDX55_01290 PF06107 Bacterial protein of unknown function (DUF951) LDX55_01295 PF01926 50S ribosome-binding GTPase LDX55_01295 PF06071 Protein of unknown function (DUF933) LDX55_01305 PF00571 CBS domain LDX55_01305 PF00478 IMP dehydrogenase / GMP reductase domain LDX55_01310 PF00072 Response regulator receiver domain LDX55_01310 PF00486 Transcriptional regulatory protein, C terminal LDX55_01315 PF00512 His Kinase A (phospho-acceptor) domain LDX55_01315 PF16736 Single Cache-like LDX55_01315 PF00989 PAS fold LDX55_01315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDX55_01320 PF00768 D-alanyl-D-alanine carboxypeptidase LDX55_01320 PF07943 Penicillin-binding protein 5, C-terminal domain LDX55_01345 PF01594 AI-2E family transporter LDX55_01350 PF00300 Histidine phosphatase superfamily (branch 1) LDX55_01365 PF00535 Glycosyl transferase family 2 LDX55_01375 PF07690 Major Facilitator Superfamily LDX55_01385 PF01479 S4 domain LDX55_01385 PF00579 tRNA synthetases class I (W and Y) LDX55_01415 PF02503 Polyphosphate kinase middle domain LDX55_01415 PF13089 Polyphosphate kinase N-terminal domain LDX55_01415 PF17941 Polyphosphate kinase C-terminal domain 1 LDX55_01415 PF13090 Polyphosphate kinase C-terminal domain 2 LDX55_01420 PF13538 UvrD-like helicase C-terminal domain LDX55_01425 PF00579 tRNA synthetases class I (W and Y) LDX55_01430 PF02541 Ppx/GppA phosphatase family LDX55_01435 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LDX55_01445 PF02146 Sir2 family LDX55_01450 PF01904 Protein of unknown function DUF72 LDX55_01455 PF09334 tRNA synthetases class I (M) LDX55_01455 PF08264 Anticodon-binding domain of tRNA LDX55_01455 PF01588 Putative tRNA binding domain LDX55_01460 PF01026 TatD related DNase LDX55_01465 PF13331 Domain of unknown function (DUF4093) LDX55_01465 PF01751 Toprim domain LDX55_01470 PF00398 Ribosomal RNA adenine dimethylase LDX55_01475 PF06257 Biofilm formation stimulator VEG LDX55_01480 PF08544 GHMP kinases C terminal LDX55_01480 PF00288 GHMP kinases N terminal domain LDX55_01485 PF09182 Bacterial purine repressor, N-terminal LDX55_01485 PF00156 Phosphoribosyl transferase domain LDX55_01490 PF00483 Nucleotidyl transferase LDX55_01490 PF00132 Bacterial transferase hexapeptide (six repeats) LDX55_01495 PF14572 Phosphoribosyl synthetase-associated domain LDX55_01495 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDX55_01510 PF01966 HD domain LDX55_01520 PF05066 HB1, ASXL, restriction endonuclease HTH domain LDX55_01525 PF06418 CTP synthase N-terminus LDX55_01525 PF00117 Glutamine amidotransferase class-I LDX55_01530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDX55_01535 PF01197 Ribosomal protein L31 LDX55_01540 PF01451 Low molecular weight phosphotyrosine protein phosphatase LDX55_01545 PF02875 Mur ligase family, glutamate ligase domain LDX55_01545 PF08245 Mur ligase middle domain LDX55_01545 PF01225 Mur ligase family, catalytic domain LDX55_01550 PF00270 DEAD/DEAH box helicase LDX55_01550 PF00271 Helicase conserved C-terminal domain LDX55_01560 PF13333 Integrase core domain LDX55_01560 PF00665 Integrase core domain LDX55_01560 PF13276 HTH-like domain LDX55_01565 PF00842 Alanine racemase, C-terminal domain LDX55_01565 PF01168 Alanine racemase, N-terminal domain LDX55_01570 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LDX55_01580 PF00056 lactate/malate dehydrogenase, NAD binding domain LDX55_01580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDX55_01585 PF01195 Peptidyl-tRNA hydrolase LDX55_01590 PF02559 CarD-like/TRCF domain LDX55_01590 PF00270 DEAD/DEAH box helicase LDX55_01590 PF03461 TRCF domain LDX55_01590 PF17757 UvrB interaction domain LDX55_01590 PF00271 Helicase conserved C-terminal domain LDX55_01595 PF01943 Polysaccharide biosynthesis protein LDX55_01595 PF14667 Polysaccharide biosynthesis C-terminal domain LDX55_01600 PF01479 S4 domain LDX55_01610 PF00575 S1 RNA binding domain LDX55_01615 PF01171 PP-loop family LDX55_01615 PF11734 TilS substrate C-terminal domain LDX55_01620 PF01171 PP-loop family LDX55_01620 PF00156 Phosphoribosyl transferase domain LDX55_01620 PF11734 TilS substrate C-terminal domain LDX55_01625 PF00004 ATPase family associated with various cellular activities (AAA) LDX55_01625 PF01434 Peptidase family M41 LDX55_01625 PF17862 AAA+ lid domain LDX55_01625 PF06480 FtsH Extracellular LDX55_01630 PF01430 Hsp33 protein LDX55_01635 PF01207 Dihydrouridine synthase (Dus) LDX55_01640 PF01336 OB-fold nucleic acid binding domain LDX55_01640 PF00152 tRNA synthetases class II (D, K and N) LDX55_01680 PF00854 POT family LDX55_01695 PF14748 Pyrroline-5-carboxylate reductase dimerisation LDX55_01695 PF03807 NADP oxidoreductase coenzyme F420-dependent LDX55_01700 PF07702 UTRA domain LDX55_01700 PF00392 Bacterial regulatory proteins, gntR family LDX55_01705 PF03808 Glycosyl transferase WecB/TagA/CpsF family LDX55_01710 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LDX55_01710 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain LDX55_01710 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LDX55_01715 PF02540 NAD synthase LDX55_01725 PF17674 HHH domain LDX55_01725 PF09371 Tex-like protein N-terminal domain LDX55_01725 PF16921 Tex protein YqgF-like domain LDX55_01725 PF00575 S1 RNA binding domain LDX55_01730 PF10263 SprT-like family LDX55_01735 PF00288 GHMP kinases N terminal domain LDX55_01735 PF08544 GHMP kinases C terminal LDX55_01755 PF03816 Cell envelope-related transcriptional attenuator domain LDX55_01760 PF00892 EamA-like transporter family LDX55_01765 PF00300 Histidine phosphatase superfamily (branch 1) LDX55_01770 PF03051 Peptidase C1-like family LDX55_01775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LDX55_01780 PF00692 dUTPase LDX55_01785 PF18073 Rubredoxin metal binding domain LDX55_01795 PF00749 tRNA synthetases class I (E and Q), catalytic domain LDX55_01800 PF01406 tRNA synthetases class I (C) catalytic domain LDX55_01800 PF09190 DALR domain LDX55_01805 PF00636 Ribonuclease III domain LDX55_01810 PF00588 SpoU rRNA Methylase family LDX55_01810 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDX55_01815 PF05991 YacP-like NYN domain LDX55_01825 PF00471 Ribosomal protein L33 LDX55_01830 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LDX55_01835 PF00467 KOW motif LDX55_01835 PF02357 Transcription termination factor nusG LDX55_01840 PF03946 Ribosomal protein L11, N-terminal domain LDX55_01840 PF00298 Ribosomal protein L11, RNA binding domain LDX55_01845 PF00687 Ribosomal protein L1p/L10e family LDX55_01850 PF00466 Ribosomal protein L10 LDX55_01855 PF00542 Ribosomal protein L7/L12 C-terminal domain LDX55_01855 PF16320 Ribosomal protein L7/L12 dimerisation domain LDX55_01860 PF09924 Uncharacterised conserved protein (DUF2156) LDX55_01860 PF03706 Lysylphosphatidylglycerol synthase TM region LDX55_01870 PF13333 Integrase core domain LDX55_01870 PF00665 Integrase core domain LDX55_01875 PF00268 Ribonucleotide reductase, small chain LDX55_01880 PF08343 Ribonucleotide reductase N-terminal LDX55_01880 PF00317 Ribonucleotide reductase, all-alpha domain LDX55_01880 PF02867 Ribonucleotide reductase, barrel domain LDX55_01885 PF00462 Glutaredoxin LDX55_01890 PF05175 Methyltransferase small domain LDX55_01895 PF14437 MafB19-like deaminase LDX55_01905 PF12169 DNA polymerase III subunits gamma and tau domain III LDX55_01910 PF02575 YbaB/EbfC DNA-binding family LDX55_01915 PF02132 RecR protein LDX55_01915 PF13662 Toprim domain LDX55_01925 PF02223 Thymidylate kinase LDX55_01930 PF06153 Cyclic-di-AMP receptor LDX55_01935 PF09115 DNA polymerase III, delta subunit, C terminal LDX55_01940 PF06156 Initiation control protein YabA LDX55_01945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LDX55_01955 PF00814 Glycoprotease family LDX55_01965 PF00814 Glycoprotease family LDX55_01970 PF00005 ABC transporter LDX55_01970 PF16326 ABC transporter C-terminal domain LDX55_01970 PF12848 ABC transporter LDX55_01975 PF02629 CoA binding domain LDX55_01975 PF06971 Putative DNA-binding protein N-terminus LDX55_01980 PF00166 Chaperonin 10 Kd subunit LDX55_01985 PF00118 TCP-1/cpn60 chaperonin family LDX55_01990 PF00953 Glycosyl transferase family 4 LDX55_01995 PF09186 Domain of unknown function (DUF1949) LDX55_01995 PF01205 Uncharacterized protein family UPF0029 LDX55_02000 PF00271 Helicase conserved C-terminal domain LDX55_02000 PF04851 Type III restriction enzyme, res subunit LDX55_02010 PF07517 SecA DEAD-like domain LDX55_02010 PF01043 SecA preprotein cross-linking domain LDX55_02010 PF07516 SecA Wing and Scaffold domain LDX55_02020 PF17820 PDZ domain LDX55_02025 PF04024 PspC domain LDX55_02030 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LDX55_02035 PF07475 HPr Serine kinase C-terminal domain LDX55_02035 PF02603 HPr Serine kinase N terminus LDX55_02040 PF01790 Prolipoprotein diacylglyceryl transferase LDX55_02045 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LDX55_02045 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LDX55_02050 PF00483 Nucleotidyl transferase LDX55_02055 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDX55_02060 PF12344 Ultra-violet resistance protein B LDX55_02060 PF17757 UvrB interaction domain LDX55_02060 PF04851 Type III restriction enzyme, res subunit LDX55_02060 PF00271 Helicase conserved C-terminal domain LDX55_02060 PF02151 UvrB/uvrC motif LDX55_02065 PF00005 ABC transporter LDX55_02065 PF17755 UvrA DNA-binding domain LDX55_02065 PF17760 UvrA interaction domain LDX55_02070 PF01933 Uncharacterised protein family UPF0052 LDX55_02075 PF14527 WhiA LAGLIDADG-like domain LDX55_02075 PF02650 WhiA C-terminal HTH domain LDX55_02075 PF10298 WhiA N-terminal LAGLIDADG-like domain LDX55_02080 PF00574 Clp protease LDX55_02090 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LDX55_02090 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LDX55_02095 PF00162 Phosphoglycerate kinase LDX55_02100 PF00121 Triosephosphate isomerase LDX55_02105 PF03952 Enolase, N-terminal domain LDX55_02105 PF00113 Enolase, C-terminal TIM barrel domain LDX55_02110 PF00654 Voltage gated chloride channel LDX55_02115 PF03840 Preprotein translocase SecG subunit LDX55_02120 PF17876 Cold shock domain LDX55_02120 PF08206 Ribonuclease B OB domain LDX55_02120 PF00773 RNB domain LDX55_02120 PF00575 S1 RNA binding domain LDX55_02125 PF01668 SmpB protein LDX55_02130 PF03167 Uracil DNA glycosylase superfamily LDX55_02135 PF01515 Phosphate acetyl/butaryl transferase LDX55_02140 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LDX55_02150 PF11490 DNA polymerase III polC-type N-terminus II LDX55_02150 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDX55_02150 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDX55_02150 PF14579 Helix-hairpin-helix motif LDX55_02150 PF02811 PHP domain LDX55_02150 PF00929 Exonuclease LDX55_02155 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LDX55_02155 PF01565 FAD binding domain LDX55_02160 PF00999 Sodium/hydrogen exchanger family LDX55_02170 PF02457 DisA bacterial checkpoint controller nucleotide-binding LDX55_02175 PF07949 YbbR-like protein LDX55_02180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDX55_02180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDX55_02180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDX55_02180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDX55_02185 PF01380 SIS domain LDX55_02190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDX55_02190 PF10135 Rod binding protein LDX55_02205 PF00155 Aminotransferase class I and II LDX55_02210 PF13333 Integrase core domain LDX55_02210 PF00665 Integrase core domain LDX55_02220 PF02705 K+ potassium transporter LDX55_02240 PF07690 Major Facilitator Superfamily LDX55_02250 PF06800 Sugar transport protein LDX55_02265 PF00152 tRNA synthetases class II (D, K and N) LDX55_02265 PF01336 OB-fold nucleic acid binding domain LDX55_02270 PF14552 Tautomerase enzyme LDX55_02275 PF08240 Alcohol dehydrogenase GroES-like domain LDX55_02275 PF00107 Zinc-binding dehydrogenase LDX55_02290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDX55_02290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDX55_02290 PF01842 ACT domain LDX55_02295 PF00266 Aminotransferase class-V LDX55_02315 PF12161 HsdM N-terminal domain LDX55_02315 PF02384 N-6 DNA Methylase LDX55_02320 PF18766 SWI2/SNF2 ATPase LDX55_02320 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LDX55_02320 PF12008 Type I restriction and modification enzyme - subunit R C terminal LDX55_02325 PF02384 N-6 DNA Methylase LDX55_02325 PF12161 HsdM N-terminal domain LDX55_02335 PF00892 EamA-like transporter family LDX55_02370 PF06993 Protein of unknown function (DUF1304) LDX55_02375 PF00857 Isochorismatase family LDX55_02390 PF00664 ABC transporter transmembrane region LDX55_02390 PF00005 ABC transporter LDX55_02395 PF00664 ABC transporter transmembrane region LDX55_02395 PF00005 ABC transporter LDX55_02400 PF00144 Beta-lactamase LDX55_02405 PF07685 CobB/CobQ-like glutamine amidotransferase domain LDX55_02410 PF08353 Domain of unknown function (DUF1727) LDX55_02410 PF08245 Mur ligase middle domain LDX55_02415 PF00265 Thymidine kinase LDX55_02420 PF03462 PCRF domain LDX55_02420 PF00472 RF-1 domain LDX55_02425 PF05175 Methyltransferase small domain LDX55_02425 PF17827 PrmC N-terminal domain LDX55_02430 PF03481 Putative GTP-binding controlling metal-binding LDX55_02430 PF01300 Telomere recombination LDX55_02435 PF00464 Serine hydroxymethyltransferase LDX55_02445 PF00119 ATP synthase A chain LDX55_02450 PF00137 ATP synthase subunit C LDX55_02455 PF00430 ATP synthase B/B' CF(0) LDX55_02460 PF00213 ATP synthase delta (OSCP) subunit LDX55_02465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDX55_02465 PF00306 ATP synthase alpha/beta chain, C terminal domain LDX55_02465 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDX55_02470 PF00231 ATP synthase LDX55_02475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LDX55_02475 PF02874 ATP synthase alpha/beta family, beta-barrel domain LDX55_02480 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LDX55_02480 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LDX55_02490 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LDX55_02500 PF01809 Putative membrane protein insertion efficiency factor LDX55_02510 PF01098 Cell cycle protein LDX55_02515 PF00005 ABC transporter LDX55_02515 PF09383 NIL domain LDX55_02520 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_02525 PF03180 NLPA lipoprotein LDX55_02530 PF07702 UTRA domain LDX55_02530 PF00392 Bacterial regulatory proteins, gntR family LDX55_02535 PF00005 ABC transporter LDX55_02545 PF07478 D-ala D-ala ligase C-terminus LDX55_02545 PF01820 D-ala D-ala ligase N-terminus LDX55_02550 PF13673 Acetyltransferase (GNAT) domain LDX55_02550 PF13302 Acetyltransferase (GNAT) domain LDX55_02550 PF03352 Methyladenine glycosylase LDX55_02550 PF00117 Glutamine amidotransferase class-I LDX55_02550 PF00958 GMP synthase C terminal domain LDX55_02560 PF00582 Universal stress protein family LDX55_02570 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDX55_02570 PF16193 AAA C-terminal domain LDX55_02570 PF12002 MgsA AAA+ ATPase C terminal LDX55_02580 PF01479 S4 domain LDX55_02580 PF00163 Ribosomal protein S4/S9 N-terminal domain LDX55_02585 PF13185 GAF domain LDX55_02590 PF06160 Septation ring formation regulator, EzrA LDX55_02595 PF00266 Aminotransferase class-V LDX55_02600 PF02568 Thiamine biosynthesis protein (ThiI) LDX55_02600 PF02926 THUMP domain LDX55_02610 PF08264 Anticodon-binding domain of tRNA LDX55_02610 PF00133 tRNA synthetases class I (I, L, M and V) LDX55_02610 PF10458 Valyl tRNA synthetase tRNA binding arm LDX55_02615 PF02875 Mur ligase family, glutamate ligase domain LDX55_02615 PF08245 Mur ligase middle domain LDX55_02625 PF04085 rod shape-determining protein MreC LDX55_02635 PF03775 Septum formation inhibitor MinC, C-terminal domain LDX55_02640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LDX55_02645 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_02650 PF00005 ABC transporter LDX55_02655 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDX55_02665 PF00675 Insulinase (Peptidase family M16) LDX55_02665 PF05193 Peptidase M16 inactive domain LDX55_02670 PF13464 Domain of unknown function (DUF4115) LDX55_02675 PF01066 CDP-alcohol phosphatidyltransferase LDX55_02680 PF02464 Competence-damaged protein LDX55_02680 PF18146 Damage-inducible protein CinA KH domain LDX55_02680 PF00994 Probable molybdopterin binding domain LDX55_02685 PF00154 recA bacterial DNA recombination protein LDX55_02690 PF01966 HD domain LDX55_02690 PF00013 KH domain LDX55_02690 PF12072 Domain of unknown function (DUF3552) LDX55_02695 PF13277 YmdB-like protein LDX55_02700 PF01624 MutS domain I LDX55_02700 PF05188 MutS domain II LDX55_02700 PF05192 MutS domain III LDX55_02700 PF05190 MutS family domain IV LDX55_02700 PF00488 MutS domain V LDX55_02705 PF01119 DNA mismatch repair protein, C-terminal domain LDX55_02705 PF08676 MutL C terminal dimerisation domain LDX55_02710 PF07499 RuvA, C-terminal domain LDX55_02710 PF01330 RuvA N terminal domain LDX55_02715 PF17864 RuvB AAA lid domain LDX55_02715 PF05491 RuvB C-terminal winged helix domain LDX55_02715 PF05496 Holliday junction DNA helicase RuvB P-loop domain LDX55_02720 PF02699 Preprotein translocase subunit LDX55_02725 PF02272 DHHA1 domain LDX55_02725 PF01368 DHH family LDX55_02730 PF00270 DEAD/DEAH box helicase LDX55_02730 PF00271 Helicase conserved C-terminal domain LDX55_02735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDX55_02735 PF01411 tRNA synthetases class II (A) LDX55_02735 PF02272 DHHA1 domain LDX55_02740 PF06135 IreB regulatory phosphoprotein LDX55_02745 PF03652 Holliday junction resolvase LDX55_02750 PF06949 Protein of unknown function (DUF1292) LDX55_02765 PF00488 MutS domain V LDX55_02765 PF01713 Smr domain LDX55_02770 PF00085 Thioredoxin LDX55_02775 PF10702 Protein of unknown function (DUF2507) LDX55_02780 PF01177 Asp/Glu/Hydantoin racemase LDX55_02785 PF01725 Ham1 family LDX55_02800 PF00356 Bacterial regulatory proteins, lacI family LDX55_02805 PF01709 Transcriptional regulator LDX55_02810 PF00437 Type II/IV secretion system protein LDX55_02815 PF00482 Type II secretion system (T2SS), protein F LDX55_02820 PF07963 Prokaryotic N-terminal methylation motif LDX55_02835 PF02384 N-6 DNA Methylase LDX55_02840 PF00871 Acetokinase family LDX55_02845 PF00324 Amino acid permease LDX55_02855 PF02872 5'-nucleotidase, C-terminal domain LDX55_02860 PF06265 Protein of unknown function (DUF1027) LDX55_02865 PF13344 Haloacid dehalogenase-like hydrolase LDX55_02875 PF09335 SNARE associated Golgi protein LDX55_02880 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LDX55_02960 PF00438 S-adenosylmethionine synthetase, N-terminal domain LDX55_02960 PF02772 S-adenosylmethionine synthetase, central domain LDX55_02960 PF02773 S-adenosylmethionine synthetase, C-terminal domain LDX55_02965 PF07690 Major Facilitator Superfamily LDX55_02970 PF06962 Putative rRNA methylase LDX55_02975 PF08264 Anticodon-binding domain of tRNA LDX55_02975 PF00133 tRNA synthetases class I (I, L, M and V) LDX55_02975 PF13603 Leucyl-tRNA synthetase, Domain 2 LDX55_02975 PF09334 tRNA synthetases class I (M) LDX55_02980 PF01943 Polysaccharide biosynthesis protein LDX55_02980 PF14667 Polysaccharide biosynthesis C-terminal domain LDX55_02990 PF01256 Carbohydrate kinase LDX55_02995 PF01546 Peptidase family M20/M25/M40 LDX55_03000 PF01712 Deoxynucleoside kinase LDX55_03005 PF01741 Large-conductance mechanosensitive channel, MscL LDX55_03015 PF00665 Integrase core domain LDX55_03015 PF13333 Integrase core domain LDX55_03030 PF00005 ABC transporter LDX55_03030 PF17755 UvrA DNA-binding domain LDX55_03030 PF17760 UvrA interaction domain LDX55_03035 PF00733 Asparagine synthase LDX55_03035 PF13537 Glutamine amidotransferase domain LDX55_03040 PF08245 Mur ligase middle domain LDX55_03040 PF02875 Mur ligase family, glutamate ligase domain LDX55_03050 PF01177 Asp/Glu/Hydantoin racemase LDX55_03060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDX55_03060 PF00056 lactate/malate dehydrogenase, NAD binding domain LDX55_03075 PF05746 DALR anticodon binding domain LDX55_03075 PF00750 tRNA synthetases class I (R) LDX55_03075 PF03485 Arginyl tRNA synthetase N terminal domain LDX55_03080 PF00912 Transglycosylase LDX55_03080 PF00905 Penicillin binding protein transpeptidase domain LDX55_03085 PF00149 Calcineurin-like phosphoesterase LDX55_03090 PF13514 AAA domain LDX55_03105 PF01230 HIT domain LDX55_03110 PF00005 ABC transporter LDX55_03120 PF02390 Putative methyltransferase LDX55_03125 PF00085 Thioredoxin LDX55_03130 PF14794 Domain of unknown function (DUF4479) LDX55_03130 PF01588 Putative tRNA binding domain LDX55_03135 PF17854 FtsK alpha domain LDX55_03135 PF09397 Ftsk gamma domain LDX55_03135 PF01580 FtsK/SpoIIIE family LDX55_03140 PF01225 Mur ligase family, catalytic domain LDX55_03140 PF02875 Mur ligase family, glutamate ligase domain LDX55_03140 PF08245 Mur ligase middle domain LDX55_03145 PF01027 Inhibitor of apoptosis-promoting Bax1 LDX55_03150 PF00476 DNA polymerase family A LDX55_03150 PF01367 5'-3' exonuclease, C-terminal SAM fold LDX55_03150 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LDX55_03155 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LDX55_03155 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LDX55_03155 PF06827 Zinc finger found in FPG and IleRS LDX55_03160 PF01121 Dephospho-CoA kinase LDX55_03165 PF03477 ATP cone domain LDX55_03170 PF07261 Replication initiation and membrane attachment LDX55_03175 PF07319 Primosomal protein DnaI N-terminus LDX55_03175 PF01695 IstB-like ATP binding protein LDX55_03180 PF03129 Anticodon binding domain LDX55_03180 PF02824 TGS domain LDX55_03180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LDX55_03180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDX55_03185 PF05198 Translation initiation factor IF-3, N-terminal domain LDX55_03185 PF00707 Translation initiation factor IF-3, C-terminal domain LDX55_03190 PF01632 Ribosomal protein L35 LDX55_03195 PF00453 Ribosomal protein L20 LDX55_03205 PF01926 50S ribosome-binding GTPase LDX55_03210 PF01985 CRS1 / YhbY (CRM) domain LDX55_03215 PF01467 Cytidylyltransferase-like LDX55_03220 PF01966 HD domain LDX55_03230 PF13649 Methyltransferase domain LDX55_03235 PF05636 HIGH Nucleotidyl Transferase LDX55_03245 PF01783 Ribosomal L32p protein family LDX55_03250 PF00486 Transcriptional regulatory protein, C terminal LDX55_03250 PF00072 Response regulator receiver domain LDX55_03255 PF18719 ArlS sensor domain LDX55_03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDX55_03255 PF00512 His Kinase A (phospho-acceptor) domain LDX55_03260 PF02660 Glycerol-3-phosphate acyltransferase LDX55_03265 PF00204 DNA gyrase B LDX55_03265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LDX55_03265 PF01751 Toprim domain LDX55_03265 PF00986 DNA gyrase B subunit, carboxyl terminus LDX55_03270 PF03989 DNA gyrase C-terminal domain, beta-propeller LDX55_03270 PF00521 DNA gyrase/topoisomerase IV, subunit A LDX55_03275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDX55_03275 PF03466 LysR substrate binding domain LDX55_03280 PF01368 DHH family LDX55_03280 PF02833 DHHA2 domain LDX55_03290 PF01641 SelR domain LDX55_03295 PF01625 Peptide methionine sulfoxide reductase LDX55_03310 PF05670 NFACT protein RNA binding domain LDX55_03315 PF02645 Uncharacterised protein, DegV family COG1307 LDX55_03330 PF00255 Glutathione peroxidase LDX55_03355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDX55_03355 PF02142 MGS-like domain LDX55_03355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LDX55_03360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LDX55_03360 PF00117 Glutamine amidotransferase class-I LDX55_03365 PF00156 Phosphoribosyl transferase domain LDX55_03370 PF00849 RNA pseudouridylate synthase LDX55_03370 PF01479 S4 domain LDX55_03375 PF01252 Signal peptidase (SPase) II LDX55_03380 PF01268 Formate--tetrahydrofolate ligase LDX55_03390 PF13456 Reverse transcriptase-like LDX55_03395 PF01266 FAD dependent oxidoreductase LDX55_03400 PF02926 THUMP domain LDX55_03400 PF01170 Putative RNA methylase family UPF0020 LDX55_03410 PF05103 DivIVA protein LDX55_03415 PF06908 YspA SLOG family LDX55_03420 PF03838 Recombination protein U LDX55_03425 PF00912 Transglycosylase LDX55_03425 PF00905 Penicillin binding protein transpeptidase domain LDX55_03440 PF13307 Helicase C-terminal domain LDX55_03440 PF00929 Exonuclease LDX55_03445 PF08544 GHMP kinases C terminal LDX55_03445 PF00288 GHMP kinases N terminal domain LDX55_03445 PF10509 Galactokinase galactose-binding signature LDX55_03455 PF08544 GHMP kinases C terminal LDX55_03455 PF00288 GHMP kinases N terminal domain LDX55_03460 PF01070 FMN-dependent dehydrogenase LDX55_03480 PF01189 16S rRNA methyltransferase RsmB/F LDX55_03480 PF17126 RsmF rRNA methyltransferase first C-terminal domain LDX55_03480 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF LDX55_03490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDX55_03490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDX55_03495 PF01361 Tautomerase enzyme LDX55_03500 PF03577 Peptidase family C69 LDX55_03505 PF01245 Ribosomal protein L19 LDX55_03510 PF01746 tRNA (Guanine-1)-methyltransferase LDX55_03515 PF05239 PRC-barrel domain LDX55_03515 PF01782 RimM N-terminal domain LDX55_03525 PF00886 Ribosomal protein S16 LDX55_03545 PF00448 SRP54-type protein, GTPase domain LDX55_03545 PF02881 SRP54-type protein, helical bundle domain LDX55_03545 PF02978 Signal peptide binding domain LDX55_03550 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LDX55_03555 PF00448 SRP54-type protein, GTPase domain LDX55_03555 PF02881 SRP54-type protein, helical bundle domain LDX55_03560 PF02463 RecF/RecN/SMC N terminal domain LDX55_03560 PF06470 SMC proteins Flexible Hinge Domain LDX55_03565 PF00035 Double-stranded RNA binding motif LDX55_03565 PF14622 Ribonuclease-III-like LDX55_03570 PF00550 Phosphopantetheine attachment site LDX55_03575 PF02504 Fatty acid synthesis protein LDX55_03580 PF00270 DEAD/DEAH box helicase LDX55_03580 PF00271 Helicase conserved C-terminal domain LDX55_03580 PF17191 RecG wedge domain LDX55_03585 PF13684 Dihydroxyacetone kinase family LDX55_03585 PF02734 DAK2 domain LDX55_03590 PF03780 Asp23 family, cell envelope-related function LDX55_03595 PF00830 Ribosomal L28 family LDX55_03600 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LDX55_03600 PF04263 Thiamin pyrophosphokinase, catalytic domain LDX55_03605 PF00834 Ribulose-phosphate 3 epimerase family LDX55_03610 PF16745 RsgA N-terminal domain LDX55_03610 PF03193 RsgA GTPase LDX55_03615 PF00069 Protein kinase domain LDX55_03615 PF03793 PASTA domain LDX55_03625 PF01189 16S rRNA methyltransferase RsmB/F LDX55_03625 PF01029 NusB family LDX55_03630 PF02911 Formyl transferase, C-terminal domain LDX55_03630 PF00551 Formyl transferase LDX55_03635 PF04851 Type III restriction enzyme, res subunit LDX55_03635 PF00271 Helicase conserved C-terminal domain LDX55_03635 PF17764 3′ DNA-binding domain (3′BD) LDX55_03635 PF18074 Primosomal protein N C-terminal domain LDX55_03635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LDX55_03640 PF04127 DNA / pantothenate metabolism flavoprotein LDX55_03640 PF02441 Flavoprotein LDX55_03645 PF01192 RNA polymerase Rpb6 LDX55_03650 PF00625 Guanylate kinase LDX55_03655 PF13476 AAA domain LDX55_03660 PF01728 FtsJ-like methyltransferase LDX55_03660 PF01479 S4 domain LDX55_03665 PF00348 Polyprenyl synthetase LDX55_03670 PF02609 Exonuclease VII small subunit LDX55_03675 PF02601 Exonuclease VII, large subunit LDX55_03675 PF13742 OB-fold nucleic acid binding domain LDX55_03680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LDX55_03680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LDX55_03685 PF01029 NusB family LDX55_03690 PF03780 Asp23 family, cell envelope-related function LDX55_03695 PF01132 Elongation factor P (EF-P) OB domain LDX55_03695 PF08207 Elongation factor P (EF-P) KOW-like domain LDX55_03695 PF09285 Elongation factor P, C-terminal LDX55_03700 PF01016 Ribosomal L27 protein LDX55_03710 PF00829 Ribosomal prokaryotic L21 protein LDX55_03725 PF13333 Integrase core domain LDX55_03725 PF13276 HTH-like domain LDX55_03725 PF00665 Integrase core domain LDX55_03735 PF03951 Glutamine synthetase, beta-Grasp domain LDX55_03735 PF00120 Glutamine synthetase, catalytic domain LDX55_03740 PF13411 MerR HTH family regulatory protein LDX55_03760 PF00480 ROK family LDX55_03775 PF01812 5-formyltetrahydrofolate cyclo-ligase family LDX55_03780 PF00471 Ribosomal protein L33 LDX55_03785 PF03717 Penicillin-binding Protein dimerisation domain LDX55_03785 PF00905 Penicillin binding protein transpeptidase domain LDX55_03795 PF00665 Integrase core domain LDX55_03795 PF13333 Integrase core domain LDX55_03805 PF01272 Transcription elongation factor, GreA/GreB, C-term LDX55_03805 PF03449 Transcription elongation factor, N-terminal LDX55_03810 PF00485 Phosphoribulokinase / Uridine kinase family LDX55_03815 PF02618 YceG-like family LDX55_03820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LDX55_03820 PF01588 Putative tRNA binding domain LDX55_03820 PF03484 tRNA synthetase B5 domain LDX55_03820 PF03483 B3/4 domain LDX55_03820 PF03147 Ferredoxin-fold anticodon binding domain LDX55_03825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LDX55_03825 PF01409 tRNA synthetases class II core domain (F) LDX55_03830 PF01638 HxlR-like helix-turn-helix LDX55_03840 PF00588 SpoU rRNA Methylase family LDX55_03840 PF08032 RNA 2'-O ribose methyltransferase substrate binding LDX55_03845 PF00708 Acylphosphatase LDX55_03850 PF02096 60Kd inner membrane protein LDX55_03855 PF01263 Aldose 1-epimerase LDX55_03860 PF02899 Phage integrase, N-terminal SAM-like domain LDX55_03860 PF00589 Phage integrase family LDX55_03865 PF01396 Topoisomerase DNA binding C4 zinc finger LDX55_03865 PF01751 Toprim domain LDX55_03865 PF01131 DNA topoisomerase LDX55_03870 PF02481 DNA recombination-mediator protein A LDX55_03870 PF18255 DNA processing protein A sterile alpha motif domain LDX55_03875 PF01351 Ribonuclease HII LDX55_03880 PF01926 50S ribosome-binding GTPase LDX55_03885 PF06855 YozE SAM-like fold LDX55_03895 PF13472 GDSL-like Lipase/Acylhydrolase family LDX55_03900 PF00186 Dihydrofolate reductase LDX55_03905 PF00303 Thymidylate synthase LDX55_03910 PF00005 ABC transporter LDX55_03910 PF16326 ABC transporter C-terminal domain LDX55_03910 PF12848 ABC transporter LDX55_03915 PF01743 Poly A polymerase head domain LDX55_03915 PF12627 Probable RNA and SrmB- binding site of polymerase A LDX55_03915 PF13735 tRNA nucleotidyltransferase domain 2 putative LDX55_03930 PF00216 Bacterial DNA-binding protein LDX55_03935 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LDX55_03935 PF01926 50S ribosome-binding GTPase LDX55_03940 PF00575 S1 RNA binding domain LDX55_03945 PF02224 Cytidylate kinase LDX55_03955 PF00270 DEAD/DEAH box helicase LDX55_03955 PF00271 Helicase conserved C-terminal domain LDX55_03965 PF12822 ECF transporter, substrate-specific component LDX55_03970 PF00849 RNA pseudouridylate synthase LDX55_03970 PF01479 S4 domain LDX55_03975 PF04079 Segregation and condensation complex subunit ScpB LDX55_03980 PF02616 Segregation and condensation protein ScpA LDX55_03985 PF00583 Acetyltransferase (GNAT) family LDX55_03990 PF02899 Phage integrase, N-terminal SAM-like domain LDX55_03990 PF00589 Phage integrase family LDX55_03995 PF17783 CvfB-like winged helix domain LDX55_03995 PF13509 S1 domain LDX55_04000 PF00391 PEP-utilising enzyme, mobile domain LDX55_04000 PF00224 Pyruvate kinase, barrel domain LDX55_04000 PF02887 Pyruvate kinase, alpha/beta domain LDX55_04005 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDX55_04005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDX55_04005 PF14579 Helix-hairpin-helix motif LDX55_04005 PF02811 PHP domain LDX55_04005 PF01336 OB-fold nucleic acid binding domain LDX55_04015 PF07724 AAA domain (Cdc48 subfamily) LDX55_04015 PF17871 AAA lid domain LDX55_04015 PF02861 Clp amino terminal domain, pathogenicity island component LDX55_04015 PF10431 C-terminal, D2-small domain, of ClpB protein LDX55_04015 PF00004 ATPase family associated with various cellular activities (AAA) LDX55_04020 PF01546 Peptidase family M20/M25/M40 LDX55_04020 PF07687 Peptidase dimerisation domain LDX55_04025 PF01784 NIF3 (NGG1p interacting factor 3) LDX55_04030 PF04816 tRNA (adenine(22)-N(1))-methyltransferase LDX55_04035 PF00140 Sigma-70 factor, region 1.2 LDX55_04035 PF04545 Sigma-70, region 4 LDX55_04035 PF03979 Sigma-70 factor, region 1.1 LDX55_04035 PF04542 Sigma-70 region 2 LDX55_04035 PF04539 Sigma-70 region 3 LDX55_04040 PF10410 DnaB-helicase binding domain of primase LDX55_04040 PF08275 DNA primase catalytic core, N-terminal domain LDX55_04040 PF01807 CHC2 zinc finger LDX55_04045 PF02092 Glycyl-tRNA synthetase beta subunit LDX55_04050 PF02091 Glycyl-tRNA synthetase alpha subunit LDX55_04055 PF02565 Recombination protein O C terminal LDX55_04055 PF11967 Recombination protein O N terminal LDX55_04060 PF07650 KH domain LDX55_04060 PF01926 50S ribosome-binding GTPase LDX55_04065 PF01219 Prokaryotic diacylglycerol kinase LDX55_04070 PF02130 Uncharacterized protein family UPF0054 LDX55_04075 PF02562 PhoH-like protein LDX55_04080 PF09424 Yqey-like protein LDX55_04085 PF01165 Ribosomal protein S21 LDX55_04090 PF03618 Kinase/pyrophosphorylase LDX55_04095 PF01261 Xylose isomerase-like TIM barrel LDX55_04100 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LDX55_04105 PF01061 ABC-2 type transporter LDX55_04110 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LDX55_04115 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LDX55_04115 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 LDX55_04120 PF02938 GAD domain LDX55_04120 PF00152 tRNA synthetases class II (D, K and N) LDX55_04120 PF01336 OB-fold nucleic acid binding domain LDX55_04125 PF03129 Anticodon binding domain LDX55_04125 PF13393 Histidyl-tRNA synthetase LDX55_04130 PF03881 Fructosamine kinase LDX55_04135 PF13419 Haloacid dehalogenase-like hydrolase LDX55_04140 PF02580 D-Tyr-tRNA(Tyr) deacylase LDX55_04145 PF04607 Region found in RelA / SpoT proteins LDX55_04145 PF13291 ACT domain LDX55_04145 PF02824 TGS domain LDX55_04150 PF04452 RNA methyltransferase LDX55_04170 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase LDX55_04175 PF00860 Permease family LDX55_04180 PF00009 Elongation factor Tu GTP binding domain LDX55_04180 PF03144 Elongation factor Tu domain 2 LDX55_04180 PF06421 GTP-binding protein LepA C-terminus LDX55_04180 PF00679 Elongation factor G C-terminus LDX55_04185 PF00226 DnaJ domain LDX55_04185 PF01556 DnaJ C terminal domain LDX55_04185 PF00684 DnaJ central domain LDX55_04190 PF00012 Hsp70 protein LDX55_04195 PF01025 GrpE LDX55_04200 PF01628 HrcA protein C terminal domain LDX55_04200 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LDX55_04205 PF01687 Riboflavin kinase LDX55_04205 PF06574 FAD synthetase LDX55_04210 PF16198 tRNA pseudouridylate synthase B C-terminal domain LDX55_04210 PF01509 TruB family pseudouridylate synthase (N terminal domain) LDX55_04215 PF02033 Ribosome-binding factor A LDX55_04220 PF11987 Translation-initiation factor 2 LDX55_04220 PF04760 Translation initiation factor IF-2, N-terminal region LDX55_04220 PF00009 Elongation factor Tu GTP binding domain LDX55_04225 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LDX55_04230 PF04296 Protein of unknown function (DUF448) LDX55_04235 PF13184 NusA-like KH domain LDX55_04235 PF08529 NusA N-terminal domain LDX55_04235 PF00575 S1 RNA binding domain LDX55_04240 PF02576 RimP N-terminal domain LDX55_04240 PF17384 RimP C-terminal SH3 domain LDX55_04245 PF14480 DNA polymerase III polC-type N-terminus I LDX55_04245 PF11490 DNA polymerase III polC-type N-terminus II LDX55_04245 PF07733 Bacterial DNA polymerase III alpha NTPase domain LDX55_04245 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LDX55_04245 PF14579 Helix-hairpin-helix motif LDX55_04245 PF02811 PHP domain LDX55_04245 PF00929 Exonuclease LDX55_04250 PF03129 Anticodon binding domain LDX55_04250 PF04073 Aminoacyl-tRNA editing domain LDX55_04250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDX55_04255 PF17820 PDZ domain LDX55_04255 PF02163 Peptidase family M50 LDX55_04265 PF01255 Putative undecaprenyl diphosphate synthase LDX55_04275 PF01765 Ribosome recycling factor LDX55_04280 PF00696 Amino acid kinase family LDX55_04285 PF00889 Elongation factor TS LDX55_04290 PF00318 Ribosomal protein S2 LDX55_04295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDX55_04295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDX55_04300 PF01541 GIY-YIG catalytic domain LDX55_04305 PF05175 Methyltransferase small domain LDX55_04310 PF01553 Acyltransferase LDX55_04320 PF00665 Integrase core domain LDX55_04320 PF13333 Integrase core domain LDX55_04325 PF03672 Uncharacterised protein family (UPF0154) LDX55_04330 PF05979 Bacterial protein of unknown function (DUF896) LDX55_04335 PF01726 LexA DNA binding domain LDX55_04335 PF00717 Peptidase S24-like LDX55_04345 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LDX55_04345 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LDX55_04365 PF00156 Phosphoribosyl transferase domain LDX55_04370 PF01368 DHH family LDX55_04370 PF02272 DHHA1 domain LDX55_04370 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LDX55_04370 PF17768 RecJ OB domain LDX55_04375 PF00753 Metallo-beta-lactamase superfamily LDX55_04380 PF01018 GTP1/OBG LDX55_04380 PF09269 Domain of unknown function (DUF1967) LDX55_04380 PF01926 50S ribosome-binding GTPase LDX55_04385 PF01541 GIY-YIG catalytic domain LDX55_04385 PF02151 UvrB/uvrC motif LDX55_04385 PF08459 UvrC Helix-hairpin-helix N-terminal LDX55_04400 PF01926 50S ribosome-binding GTPase LDX55_04410 PF13333 Integrase core domain LDX55_04410 PF00665 Integrase core domain LDX55_04415 PF07724 AAA domain (Cdc48 subfamily) LDX55_04415 PF06689 ClpX C4-type zinc finger LDX55_04415 PF10431 C-terminal, D2-small domain, of ClpB protein LDX55_04420 PF05698 Bacterial trigger factor protein (TF) C-terminus LDX55_04420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LDX55_04420 PF05697 Bacterial trigger factor protein (TF) LDX55_04425 PF03144 Elongation factor Tu domain 2 LDX55_04425 PF03143 Elongation factor Tu C-terminal domain LDX55_04425 PF00009 Elongation factor Tu GTP binding domain LDX55_04435 PF00753 Metallo-beta-lactamase superfamily LDX55_04435 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LDX55_04435 PF17770 Ribonuclease J C-terminal domain LDX55_04440 PF00312 Ribosomal protein S15 LDX55_04445 PF01649 Ribosomal protein S20 LDX55_04450 PF06144 DNA polymerase III, delta subunit LDX55_04455 PF13567 Domain of unknown function (DUF4131) LDX55_04455 PF03772 Competence protein LDX55_04455 PF00753 Metallo-beta-lactamase superfamily LDX55_04460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LDX55_04470 PF05362 Lon protease (S16) C-terminal proteolytic domain LDX55_04470 PF13180 PDZ domain LDX55_04475 PF01467 Cytidylyltransferase-like LDX55_04485 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) LDX55_04490 PF01098 Cell cycle protein LDX55_04495 PF00679 Elongation factor G C-terminus LDX55_04495 PF14492 Elongation Factor G, domain II LDX55_04495 PF00009 Elongation factor Tu GTP binding domain LDX55_04495 PF03144 Elongation factor Tu domain 2 LDX55_04500 PF00459 Inositol monophosphatase family LDX55_04505 PF05256 Uncharacterised protein family (UPF0223) LDX55_04510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LDX55_04510 PF00056 lactate/malate dehydrogenase, NAD binding domain LDX55_04515 PF01327 Polypeptide deformylase LDX55_04525 PF07288 Protein of unknown function (DUF1447) LDX55_04530 PF00753 Metallo-beta-lactamase superfamily LDX55_04530 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LDX55_04530 PF17770 Ribonuclease J C-terminal domain LDX55_04535 PF00781 Diacylglycerol kinase catalytic domain LDX55_04540 PF13520 Amino acid permease LDX55_04545 PF00248 Aldo/keto reductase family LDX55_04550 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LDX55_04550 PF14572 Phosphoribosyl synthetase-associated domain LDX55_04555 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain LDX55_04555 PF13538 UvrD-like helicase C-terminal domain LDX55_04555 PF14490 Helix-hairpin-helix containing domain LDX55_04580 PF00266 Aminotransferase class-V LDX55_04585 PF01048 Phosphorylase superfamily LDX55_04595 PF00293 NUDIX domain LDX55_04600 PF00313 'Cold-shock' DNA-binding domain LDX55_04605 PF08264 Anticodon-binding domain of tRNA LDX55_04605 PF00133 tRNA synthetases class I (I, L, M and V) LDX55_04605 PF06827 Zinc finger found in FPG and IleRS LDX55_04610 PF05103 DivIVA protein LDX55_04620 PF04472 Cell division protein SepF LDX55_04625 PF00091 Tubulin/FtsZ family, GTPase domain LDX55_04625 PF12327 FtsZ family, C-terminal domain LDX55_04630 PF11983 Membrane-attachment and polymerisation-promoting switch LDX55_04630 PF02491 SHS2 domain inserted in FTSA LDX55_04635 PF03799 Cell division protein FtsQ LDX55_04635 PF08478 POTRA domain, FtsQ-type LDX55_04640 PF04101 Glycosyltransferase family 28 C-terminal domain LDX55_04640 PF03033 Glycosyltransferase family 28 N-terminal domain LDX55_04645 PF02875 Mur ligase family, glutamate ligase domain LDX55_04645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LDX55_04645 PF08245 Mur ligase middle domain LDX55_04650 PF00953 Glycosyl transferase family 4 LDX55_04650 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LDX55_04655 PF03793 PASTA domain LDX55_04655 PF03717 Penicillin-binding Protein dimerisation domain LDX55_04655 PF00905 Penicillin binding protein transpeptidase domain LDX55_04665 PF01795 MraW methylase family LDX55_04670 PF02381 MraZ protein, putative antitoxin-like LDX55_04685 PF17854 FtsK alpha domain LDX55_04685 PF09397 Ftsk gamma domain LDX55_04685 PF01580 FtsK/SpoIIIE family LDX55_04690 PF00588 SpoU rRNA Methylase family LDX55_04695 PF08241 Methyltransferase domain LDX55_04700 PF00849 RNA pseudouridylate synthase LDX55_04705 PF01513 ATP-NAD kinase LDX55_04710 PF04607 Region found in RelA / SpoT proteins LDX55_04720 PF08439 Oligopeptidase F LDX55_04720 PF01432 Peptidase family M3 LDX55_04730 PF05389 Negative regulator of genetic competence (MecA) LDX55_04735 PF12706 Beta-lactamase superfamily domain LDX55_04750 PF00665 Integrase core domain LDX55_04750 PF13333 Integrase core domain LDX55_04760 PF03965 Penicillinase repressor LDX55_04895 PF00884 Sulfatase LDX55_04905 PF13439 Glycosyltransferase Family 4 LDX55_04905 PF00534 Glycosyl transferases group 1 LDX55_04910 PF13439 Glycosyltransferase Family 4 LDX55_04910 PF00534 Glycosyl transferases group 1 LDX55_04915 PF00381 PTS HPr component phosphorylation site LDX55_04925 PF17871 AAA lid domain LDX55_04925 PF10431 C-terminal, D2-small domain, of ClpB protein LDX55_04925 PF07724 AAA domain (Cdc48 subfamily) LDX55_04925 PF00004 ATPase family associated with various cellular activities (AAA) LDX55_04935 PF00009 Elongation factor Tu GTP binding domain LDX55_04935 PF03144 Elongation factor Tu domain 2 LDX55_04935 PF16658 Class II release factor RF3, C-terminal domain LDX55_04940 PF01467 Cytidylyltransferase-like LDX55_04945 PF01594 AI-2E family transporter LDX55_04950 PF02631 RecX family LDX55_04955 PF00258 Flavodoxin LDX55_04960 PF03631 Virulence factor BrkB LDX55_04965 PF02350 UDP-N-acetylglucosamine 2-epimerase LDX55_04970 PF00535 Glycosyl transferase family 2 LDX55_04975 PF04138 GtrA-like protein LDX55_04980 PF02447 GntP family permease LDX55_04985 PF06800 Sugar transport protein LDX55_04990 PF00072 Response regulator receiver domain LDX55_04990 PF00486 Transcriptional regulatory protein, C terminal LDX55_04995 PF01895 PhoU domain LDX55_05000 PF00005 ABC transporter LDX55_05005 PF00005 ABC transporter LDX55_05010 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_05015 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_05020 PF12849 PBP superfamily domain LDX55_05025 PF12849 PBP superfamily domain LDX55_05035 PF00271 Helicase conserved C-terminal domain LDX55_05035 PF00270 DEAD/DEAH box helicase LDX55_05040 PF01183 Glycosyl hydrolases family 25 LDX55_05040 PF01471 Putative peptidoglycan binding domain LDX55_05045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LDX55_05045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LDX55_05050 PF13520 Amino acid permease LDX55_05065 PF13333 Integrase core domain LDX55_05065 PF00665 Integrase core domain LDX55_05065 PF13276 HTH-like domain LDX55_05085 PF00665 Integrase core domain LDX55_05085 PF13333 Integrase core domain LDX55_05090 PF05958 tRNA (Uracil-5-)-methyltransferase LDX55_05090 PF01938 TRAM domain LDX55_05095 PF00781 Diacylglycerol kinase catalytic domain LDX55_05100 PF02934 GatB/GatE catalytic domain LDX55_05100 PF02637 GatB domain LDX55_05105 PF01425 Amidase LDX55_05110 PF02686 Glu-tRNAGln amidotransferase C subunit LDX55_05115 PF07537 CamS sex pheromone cAM373 precursor LDX55_05120 PF03120 NAD-dependent DNA ligase OB-fold domain LDX55_05120 PF00533 BRCA1 C Terminus (BRCT) domain LDX55_05120 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LDX55_05120 PF12826 Helix-hairpin-helix motif LDX55_05120 PF01653 NAD-dependent DNA ligase adenylation domain LDX55_05125 PF00580 UvrD/REP helicase N-terminal domain LDX55_05125 PF13361 UvrD-like helicase C-terminal domain LDX55_05135 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LDX55_05135 PF13457 GW (Gly-Tryp) dipeptide domain LDX55_05145 PF12822 ECF transporter, substrate-specific component LDX55_05150 PF00380 Ribosomal protein S9/S16 LDX55_05155 PF00572 Ribosomal protein L13 LDX55_05160 PF01416 tRNA pseudouridine synthase LDX55_05165 PF02361 Cobalt transport protein LDX55_05170 PF00005 ABC transporter LDX55_05175 PF00005 ABC transporter LDX55_05180 PF01196 Ribosomal protein L17 LDX55_05185 PF01000 RNA polymerase Rpb3/RpoA insert domain LDX55_05185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LDX55_05185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LDX55_05190 PF00411 Ribosomal protein S11 LDX55_05195 PF00416 Ribosomal protein S13/S18 LDX55_05200 PF00444 Ribosomal protein L36 LDX55_05205 PF01176 Translation initiation factor 1A / IF-1 LDX55_05210 PF05191 Adenylate kinase, active site lid LDX55_05215 PF00344 SecY translocase LDX55_05220 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LDX55_05225 PF00327 Ribosomal protein L30p/L7e LDX55_05230 PF00333 Ribosomal protein S5, N-terminal domain LDX55_05230 PF03719 Ribosomal protein S5, C-terminal domain LDX55_05235 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LDX55_05240 PF00347 Ribosomal protein L6 LDX55_05245 PF00410 Ribosomal protein S8 LDX55_05250 PF00253 Ribosomal protein S14p/S29e LDX55_05255 PF00281 Ribosomal protein L5 LDX55_05255 PF00673 ribosomal L5P family C-terminus LDX55_05260 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LDX55_05260 PF00467 KOW motif LDX55_05265 PF00238 Ribosomal protein L14p/L23e LDX55_05270 PF00366 Ribosomal protein S17 LDX55_05275 PF00831 Ribosomal L29 protein LDX55_05280 PF00252 Ribosomal protein L16p/L10e LDX55_05285 PF07650 KH domain LDX55_05285 PF00189 Ribosomal protein S3, C-terminal domain LDX55_05290 PF00237 Ribosomal protein L22p/L17e LDX55_05295 PF00203 Ribosomal protein S19 LDX55_05300 PF03947 Ribosomal Proteins L2, C-terminal domain LDX55_05300 PF00181 Ribosomal Proteins L2, RNA binding domain LDX55_05305 PF00276 Ribosomal protein L23 LDX55_05310 PF00573 Ribosomal protein L4/L1 family LDX55_05315 PF00297 Ribosomal protein L3 LDX55_05320 PF00338 Ribosomal protein S10p/S20e LDX55_05325 PF00679 Elongation factor G C-terminus LDX55_05325 PF14492 Elongation Factor G, domain II LDX55_05325 PF03764 Elongation factor G, domain IV LDX55_05325 PF00009 Elongation factor Tu GTP binding domain LDX55_05325 PF03144 Elongation factor Tu domain 2 LDX55_05330 PF00177 Ribosomal protein S7p/S5e LDX55_05335 PF00164 Ribosomal protein S12/S23 LDX55_05350 PF04983 RNA polymerase Rpb1, domain 3 LDX55_05350 PF05000 RNA polymerase Rpb1, domain 4 LDX55_05350 PF04998 RNA polymerase Rpb1, domain 5 LDX55_05350 PF00623 RNA polymerase Rpb1, domain 2 LDX55_05350 PF04997 RNA polymerase Rpb1, domain 1 LDX55_05355 PF04563 RNA polymerase beta subunit LDX55_05355 PF04561 RNA polymerase Rpb2, domain 2 LDX55_05355 PF04565 RNA polymerase Rpb2, domain 3 LDX55_05355 PF10385 RNA polymerase beta subunit external 1 domain LDX55_05355 PF00562 RNA polymerase Rpb2, domain 6 LDX55_05355 PF04560 RNA polymerase Rpb2, domain 7 LDX55_05360 PF07724 AAA domain (Cdc48 subfamily) LDX55_05360 PF17871 AAA lid domain LDX55_05360 PF00004 ATPase family associated with various cellular activities (AAA) LDX55_05360 PF10431 C-terminal, D2-small domain, of ClpB protein LDX55_05360 PF02861 Clp amino terminal domain, pathogenicity island component LDX55_05365 PF05848 CtsR N-terminal HTH domain LDX55_05365 PF17727 CtsR C-terminal dimerization domain LDX55_05410 PF02403 Seryl-tRNA synthetase N-terminal domain LDX55_05410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LDX55_05415 PF01712 Deoxynucleoside kinase LDX55_05420 PF00324 Amino acid permease LDX55_05440 PF01925 Sulfite exporter TauE/SafE LDX55_05470 PF01545 Cation efflux family LDX55_05490 PF00849 RNA pseudouridylate synthase LDX55_05495 PF00194 Eukaryotic-type carbonic anhydrase LDX55_05505 PF14537 Cytochrome c3 LDX55_05505 PF00890 FAD binding domain LDX55_05510 PF08240 Alcohol dehydrogenase GroES-like domain LDX55_05510 PF00107 Zinc-binding dehydrogenase LDX55_05515 PF00892 EamA-like transporter family LDX55_05520 PF00696 Amino acid kinase family LDX55_05525 PF00171 Aldehyde dehydrogenase family LDX55_05530 PF02540 NAD synthase LDX55_05530 PF00117 Glutamine amidotransferase class-I LDX55_05530 PF00958 GMP synthase C terminal domain LDX55_05535 PF00485 Phosphoribulokinase / Uridine kinase family LDX55_05540 PF13538 UvrD-like helicase C-terminal domain LDX55_05545 PF00300 Histidine phosphatase superfamily (branch 1) LDX55_05550 PF00005 ABC transporter LDX55_05550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDX55_05555 PF00005 ABC transporter LDX55_05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDX55_05560 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_05560 PF12911 N-terminal TM domain of oligopeptide transport permease C LDX55_05565 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_05570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_05575 PF16360 GTP-binding GTPase Middle Region LDX55_05575 PF13167 GTP-binding GTPase N-terminal LDX55_05575 PF01926 50S ribosome-binding GTPase LDX55_05590 PF00625 Guanylate kinase LDX55_05595 PF13344 Haloacid dehalogenase-like hydrolase LDX55_05595 PF00293 NUDIX domain LDX55_05600 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LDX55_05600 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LDX55_05600 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LDX55_05605 PF00561 alpha/beta hydrolase fold LDX55_05615 PF00005 ABC transporter LDX55_05615 PF12848 ABC transporter LDX55_05620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDX55_05625 PF13520 Amino acid permease LDX55_05635 PF02653 Branched-chain amino acid transport system / permease component LDX55_05640 PF00005 ABC transporter LDX55_05640 PF09383 NIL domain LDX55_05645 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LDX55_05645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LDX55_05670 PF03466 LysR substrate binding domain LDX55_05670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDX55_05675 PF13520 Amino acid permease LDX55_05685 PF07943 Penicillin-binding protein 5, C-terminal domain LDX55_05685 PF00768 D-alanyl-D-alanine carboxypeptidase LDX55_05690 PF09819 ABC-type cobalt transport system, permease component LDX55_05695 PF00005 ABC transporter LDX55_05715 PF00710 Asparaginase, N-terminal LDX55_05715 PF17763 Glutaminase/Asparaginase C-terminal domain LDX55_05720 PF00860 Permease family LDX55_05730 PF07690 Major Facilitator Superfamily LDX55_05740 PF00230 Major intrinsic protein LDX55_05745 PF02645 Uncharacterised protein, DegV family COG1307 LDX55_05755 PF13333 Integrase core domain LDX55_05755 PF00665 Integrase core domain LDX55_05770 PF10282 Lactonase, 7-bladed beta-propeller LDX55_05775 PF00324 Amino acid permease LDX55_05780 PF02574 Homocysteine S-methyltransferase LDX55_05790 PF01475 Ferric uptake regulator family LDX55_05795 PF02774 Semialdehyde dehydrogenase, dimerisation domain LDX55_05795 PF01118 Semialdehyde dehydrogenase, NAD binding domain LDX55_05800 PF00155 Aminotransferase class I and II LDX55_05805 PF05173 Dihydrodipicolinate reductase, C-terminus LDX55_05805 PF01113 Dihydrodipicolinate reductase, N-terminus LDX55_05810 PF00701 Dihydrodipicolinate synthetase family LDX55_05815 PF01546 Peptidase family M20/M25/M40 LDX55_05815 PF07687 Peptidase dimerisation domain LDX55_05820 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LDX55_05820 PF00132 Bacterial transferase hexapeptide (six repeats) LDX55_05820 PF14602 Hexapeptide repeat of succinyl-transferase LDX55_05825 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LDX55_05825 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LDX55_05830 PF00696 Amino acid kinase family LDX55_05830 PF13840 ACT domain LDX55_05835 PF01678 Diaminopimelate epimerase LDX55_05850 PF07690 Major Facilitator Superfamily LDX55_05855 PF14010 Phosphoenolpyruvate carboxylase LDX55_05860 PF00155 Aminotransferase class I and II LDX55_05875 PF07687 Peptidase dimerisation domain LDX55_05875 PF01546 Peptidase family M20/M25/M40 LDX55_05880 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_05885 PF09383 NIL domain LDX55_05885 PF00005 ABC transporter LDX55_05890 PF03180 NLPA lipoprotein LDX55_05900 PF07676 WD40-like Beta Propeller Repeat LDX55_05900 PF00326 Prolyl oligopeptidase family LDX55_05915 PF00005 ABC transporter LDX55_05915 PF00571 CBS domain LDX55_05920 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_05925 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LDX55_05930 PF01431 Peptidase family M13 LDX55_05930 PF05649 Peptidase family M13 LDX55_05935 PF07690 Major Facilitator Superfamily LDX55_05945 PF00557 Metallopeptidase family M24 LDX55_05950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LDX55_05950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LDX55_05955 PF02028 BCCT, betaine/carnitine/choline family transporter LDX55_05960 PF14602 Hexapeptide repeat of succinyl-transferase LDX55_05960 PF12464 Maltose acetyltransferase LDX55_05970 PF08543 Phosphomethylpyrimidine kinase LDX55_05975 PF13333 Integrase core domain LDX55_05975 PF00665 Integrase core domain LDX55_05975 PF13276 HTH-like domain LDX55_05990 PF02525 Flavodoxin-like fold LDX55_05995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_06000 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_06005 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_06010 PF00005 ABC transporter LDX55_06010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDX55_06015 PF00005 ABC transporter LDX55_06015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LDX55_06020 PF00313 'Cold-shock' DNA-binding domain LDX55_06045 PF13333 Integrase core domain LDX55_06045 PF00665 Integrase core domain LDX55_06070 PF00892 EamA-like transporter family LDX55_06075 PF13520 Amino acid permease LDX55_06085 PF03176 MMPL family LDX55_06095 PF00892 EamA-like transporter family LDX55_06100 PF00248 Aldo/keto reductase family LDX55_06105 PF16363 GDP-mannose 4,6 dehydratase LDX55_06110 PF02801 Beta-ketoacyl synthase, C-terminal domain LDX55_06110 PF00109 Beta-ketoacyl synthase, N-terminal domain LDX55_06115 PF07977 FabA-like domain LDX55_06130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LDX55_06135 PF01039 Carboxyl transferase domain LDX55_06140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LDX55_06140 PF00289 Biotin carboxylase, N-terminal domain LDX55_06140 PF02785 Biotin carboxylase C-terminal domain LDX55_06145 PF07977 FabA-like domain LDX55_06150 PF00364 Biotin-requiring enzyme LDX55_06160 PF00698 Acyl transferase domain LDX55_06165 PF00550 Phosphopantetheine attachment site LDX55_06170 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LDX55_06170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LDX55_06180 PF00665 Integrase core domain LDX55_06180 PF13276 HTH-like domain LDX55_06180 PF13333 Integrase core domain LDX55_06185 PF00881 Nitroreductase family LDX55_06190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LDX55_06190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LDX55_06190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LDX55_06190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LDX55_06215 PF00005 ABC transporter LDX55_06215 PF12848 ABC transporter LDX55_06220 PF13460 NAD(P)H-binding LDX55_06250 PF04239 Protein of unknown function (DUF421) LDX55_06260 PF00893 Small Multidrug Resistance protein LDX55_06265 PF03006 Haemolysin-III related LDX55_06275 PF00005 ABC transporter LDX55_06290 PF01047 MarR family LDX55_06295 PF00324 Amino acid permease LDX55_06300 PF00324 Amino acid permease LDX55_06305 PF13520 Amino acid permease LDX55_06315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDX55_06315 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDX55_06325 PF02324 Glycosyl hydrolase family 70 LDX55_06325 PF01473 Putative cell wall binding repeat LDX55_06330 PF02324 Glycosyl hydrolase family 70 LDX55_06330 PF01473 Putative cell wall binding repeat LDX55_06335 PF01473 Putative cell wall binding repeat LDX55_06335 PF02324 Glycosyl hydrolase family 70 LDX55_06335 PF01473 Putative cell wall binding repeat LDX55_06335 PF02324 Glycosyl hydrolase family 70 LDX55_06345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_06360 PF07690 Major Facilitator Superfamily LDX55_06360 PF00083 Sugar (and other) transporter LDX55_06380 PF00535 Glycosyl transferase family 2 LDX55_06385 PF13439 Glycosyltransferase Family 4 LDX55_06385 PF00534 Glycosyl transferases group 1 LDX55_06390 PF02397 Bacterial sugar transferase LDX55_06400 PF13614 AAA domain LDX55_06405 PF02706 Chain length determinant protein LDX55_06410 PF03816 Cell envelope-related transcriptional attenuator domain LDX55_06435 PF00817 impB/mucB/samB family LDX55_06435 PF11799 impB/mucB/samB family C-terminal domain LDX55_06435 PF11798 IMS family HHH motif LDX55_06445 PF05525 Branched-chain amino acid transport protein LDX55_06455 PF05525 Branched-chain amino acid transport protein LDX55_06465 PF04011 LemA family LDX55_06485 PF10415 Fumarase C C-terminus LDX55_06485 PF00206 Lyase LDX55_06510 PF04397 LytTr DNA-binding domain LDX55_06510 PF00072 Response regulator receiver domain LDX55_06520 PF00005 ABC transporter LDX55_06530 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_06535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_06540 PF07722 Peptidase C26 LDX55_06550 PF00665 Integrase core domain LDX55_06550 PF13333 Integrase core domain LDX55_06560 PF07563 Protein of unknown function (DUF1541) LDX55_06570 PF03306 Alpha-acetolactate decarboxylase LDX55_06575 PF00230 Major intrinsic protein LDX55_06590 PF00665 Integrase core domain LDX55_06590 PF13333 Integrase core domain LDX55_06595 PF01965 DJ-1/PfpI family LDX55_06610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LDX55_06620 PF07690 Major Facilitator Superfamily LDX55_06650 PF00205 Thiamine pyrophosphate enzyme, central domain LDX55_06650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LDX55_06650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LDX55_06655 PF13276 HTH-like domain LDX55_06655 PF13333 Integrase core domain LDX55_06655 PF00665 Integrase core domain LDX55_06680 PF05368 NmrA-like family LDX55_06685 PF02082 Transcriptional regulator LDX55_06695 PF07690 Major Facilitator Superfamily LDX55_06705 PF02844 Phosphoribosylglycinamide synthetase, N domain LDX55_06705 PF02843 Phosphoribosylglycinamide synthetase, C domain LDX55_06705 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LDX55_06710 PF02142 MGS-like domain LDX55_06710 PF01808 AICARFT/IMPCHase bienzyme LDX55_06715 PF00551 Formyl transferase LDX55_06720 PF02769 AIR synthase related protein, C-terminal domain LDX55_06720 PF00586 AIR synthase related protein, N-terminal domain LDX55_06725 PF13537 Glutamine amidotransferase domain LDX55_06725 PF00156 Phosphoribosyl transferase domain LDX55_06730 PF02769 AIR synthase related protein, C-terminal domain LDX55_06730 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LDX55_06730 PF00586 AIR synthase related protein, N-terminal domain LDX55_06745 PF01259 SAICAR synthetase LDX55_06750 PF02222 ATP-grasp domain LDX55_06750 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LDX55_06755 PF00731 AIR carboxylase LDX55_06760 PF07943 Penicillin-binding protein 5, C-terminal domain LDX55_06760 PF00768 D-alanyl-D-alanine carboxypeptidase LDX55_06765 PF11838 ERAP1-like C-terminal domain LDX55_06765 PF01433 Peptidase family M1 domain LDX55_06780 PF01473 Putative cell wall binding repeat LDX55_06780 PF02324 Glycosyl hydrolase family 70 LDX55_06800 PF01381 Helix-turn-helix LDX55_06805 PF02590 Predicted SPOUT methyltransferase LDX55_06815 PF00199 Catalase LDX55_06815 PF06628 Catalase-related immune-responsive LDX55_06825 PF03447 Homoserine dehydrogenase, NAD binding domain LDX55_06825 PF00742 Homoserine dehydrogenase LDX55_06825 PF01842 ACT domain LDX55_06830 PF14821 Threonine synthase N terminus LDX55_06830 PF00291 Pyridoxal-phosphate dependent enzyme LDX55_06835 PF00288 GHMP kinases N terminal domain LDX55_06835 PF08544 GHMP kinases C terminal LDX55_06865 PF03009 Glycerophosphoryl diester phosphodiesterase family LDX55_06890 PF00005 ABC transporter LDX55_06915 PF07992 Pyridine nucleotide-disulphide oxidoreductase LDX55_06915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LDX55_06945 PF12704 MacB-like periplasmic core domain LDX55_06945 PF02687 FtsX-like permease family LDX55_06945 PF00005 ABC transporter LDX55_06950 PF00440 Bacterial regulatory proteins, tetR family LDX55_06955 PF00924 Mechanosensitive ion channel LDX55_06960 PF00924 Mechanosensitive ion channel LDX55_06965 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_06970 PF00005 ABC transporter LDX55_06975 PF00497 Bacterial extracellular solute-binding proteins, family 3 LDX55_06990 PF00665 Integrase core domain LDX55_06990 PF13333 Integrase core domain LDX55_06995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LDX55_06995 PF03466 LysR substrate binding domain LDX55_07000 PF00390 Malic enzyme, N-terminal domain LDX55_07000 PF03949 Malic enzyme, NAD binding domain LDX55_07025 PF00004 ATPase family associated with various cellular activities (AAA) LDX55_07025 PF10431 C-terminal, D2-small domain, of ClpB protein LDX55_07025 PF17871 AAA lid domain LDX55_07025 PF07724 AAA domain (Cdc48 subfamily) LDX55_07030 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_07035 PF00005 ABC transporter LDX55_07045 PF07690 Major Facilitator Superfamily LDX55_07055 PF03601 Conserved hypothetical protein 698 LDX55_07065 PF00005 ABC transporter LDX55_07065 PF13732 Domain of unknown function (DUF4162) LDX55_07075 PF12705 PD-(D/E)XK nuclease superfamily LDX55_07075 PF00580 UvrD/REP helicase N-terminal domain LDX55_07075 PF13361 UvrD-like helicase C-terminal domain LDX55_07080 PF12705 PD-(D/E)XK nuclease superfamily LDX55_07085 PF05067 Manganese containing catalase LDX55_07110 PF00324 Amino acid permease LDX55_07115 PF00324 Amino acid permease LDX55_07130 PF00248 Aldo/keto reductase family LDX55_07135 PF00860 Permease family LDX55_07145 PF00075 RNase H LDX55_07150 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDX55_07155 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LDX55_07160 PF00480 ROK family LDX55_07165 PF08240 Alcohol dehydrogenase GroES-like domain LDX55_07165 PF00107 Zinc-binding dehydrogenase LDX55_07170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LDX55_07175 PF00679 Elongation factor G C-terminus LDX55_07175 PF06421 GTP-binding protein LepA C-terminus LDX55_07175 PF00009 Elongation factor Tu GTP binding domain LDX55_07180 PF00440 Bacterial regulatory proteins, tetR family LDX55_07180 PF08359 YsiA-like protein, C-terminal region LDX55_07195 PF00950 ABC 3 transport family LDX55_07200 PF00005 ABC transporter LDX55_07205 PF01520 N-acetylmuramoyl-L-alanine amidase LDX55_07205 PF08239 Bacterial SH3 domain LDX55_07225 PF07690 Major Facilitator Superfamily LDX55_07230 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LDX55_07235 PF00156 Phosphoribosyl transferase domain LDX55_07240 PF13396 Phospholipase_D-nuclease N-terminal LDX55_07240 PF13091 PLD-like domain LDX55_07250 PF00665 Integrase core domain LDX55_07250 PF13333 Integrase core domain LDX55_07260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LDX55_07265 PF01979 Amidohydrolase family LDX55_07275 PF00742 Homoserine dehydrogenase LDX55_07275 PF03447 Homoserine dehydrogenase, NAD binding domain LDX55_07275 PF01842 ACT domain LDX55_07280 PF01053 Cys/Met metabolism PLP-dependent enzyme LDX55_07285 PF01053 Cys/Met metabolism PLP-dependent enzyme LDX55_07290 PF04204 Homoserine O-succinyltransferase LDX55_07295 PF08267 Cobalamin-independent synthase, N-terminal domain LDX55_07295 PF01717 Cobalamin-independent synthase, Catalytic domain LDX55_07330 PF00005 ABC transporter LDX55_07335 PF00528 Binding-protein-dependent transport system inner membrane component LDX55_07340 PF14698 Argininosuccinate lyase C-terminal LDX55_07340 PF00206 Lyase LDX55_07345 PF00764 Arginosuccinate synthase LDX55_07350 PF03051 Peptidase C1-like family LDX55_07355 PF03051 Peptidase C1-like family LDX55_07360 PF00202 Aminotransferase class-III LDX55_07370 PF10502 Signal peptidase, peptidase S26 LDX55_07375 PF10502 Signal peptidase, peptidase S26 LDX55_07380 PF01134 Glucose inhibited division protein A LDX55_07380 PF13932 GidA associated domain LDX55_07385 PF01926 50S ribosome-binding GTPase LDX55_07385 PF12631 MnmE helical domain LDX55_07385 PF10396 GTP-binding protein TrmE N-terminus LDX55_07390 PF14804 Jag N-terminus LDX55_07390 PF01424 R3H domain LDX55_07395 PF02096 60Kd inner membrane protein LDX55_07400 PF00825 Ribonuclease P LDX55_07405 PF00468 Ribosomal protein L34