locus-tag class description DEH84_00010 PF02767 DNA polymerase III beta subunit, central domain DEH84_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DEH84_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DEH84_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_00020 PF00204 DNA gyrase B DEH84_00020 PF00986 DNA gyrase B subunit, carboxyl terminus DEH84_00020 PF18053 DNA gyrase B subunit insert domain DEH84_00020 PF01751 Toprim domain DEH84_00025 PF08780 Nucleotidyltransferase substrate binding protein like DEH84_00030 PF01909 Nucleotidyltransferase domain DEH84_00060 PF12805 FUSC-like inner membrane protein yccS DEH84_00100 PF00682 HMGL-like DEH84_00100 PF08502 LeuA allosteric (dimerisation) domain DEH84_00105 PF01037 Lrp/AsnC ligand binding domain DEH84_00115 PF17827 PrmC N-terminal domain DEH84_00115 PF05175 Methyltransferase small domain DEH84_00130 PF01119 DNA mismatch repair protein, C-terminal domain DEH84_00130 PF08676 MutL C terminal dimerisation domain DEH84_00165 PF01242 6-pyruvoyl tetrahydropterin synthase DEH84_00195 PF14814 Bifunctional transglycosylase second domain DEH84_00195 PF00905 Penicillin binding protein transpeptidase domain DEH84_00195 PF00912 Transglycosylase DEH84_00220 PF03831 PhnA domain DEH84_00220 PF08274 PhnA Zinc-Ribbon DEH84_00230 PF00072 Response regulator receiver domain DEH84_00240 PF07690 Major Facilitator Superfamily DEH84_00250 PF00990 Diguanylate cyclase, GGDEF domain DEH84_00250 PF03707 Bacterial signalling protein N terminal repeat DEH84_00250 PF00563 EAL domain DEH84_00255 PF07963 Prokaryotic N-terminal methylation motif DEH84_00255 PF08334 Type II secretion system (T2SS), protein G DEH84_00260 PF00107 Zinc-binding dehydrogenase DEH84_00260 PF08240 Alcohol dehydrogenase GroES-like domain DEH84_00275 PF00561 alpha/beta hydrolase fold DEH84_00290 PF00155 Aminotransferase class I and II DEH84_00295 PF00561 alpha/beta hydrolase fold DEH84_00300 PF03280 Proteobacterial lipase chaperone protein DEH84_00315 PF00781 Diacylglycerol kinase catalytic domain DEH84_00320 PF00472 RF-1 domain DEH84_00325 PF02146 Sir2 family DEH84_00345 PF00005 ABC transporter DEH84_00355 PF12833 Helix-turn-helix domain DEH84_00365 PF13520 Amino acid permease DEH84_00370 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DEH84_00375 PF05985 Ethanolamine ammonia-lyase light chain (EutC) DEH84_00380 PF03313 Serine dehydratase alpha chain DEH84_00380 PF03315 Serine dehydratase beta chain DEH84_00420 PF04717 Type VI secretion system, phage-baseplate injector DEH84_00430 PF00563 EAL domain DEH84_00430 PF00990 Diguanylate cyclase, GGDEF domain DEH84_00430 PF03707 Bacterial signalling protein N terminal repeat DEH84_00435 PF07995 Glucose / Sorbosone dehydrogenase DEH84_00440 PF00158 Sigma-54 interaction domain DEH84_00440 PF02954 Bacterial regulatory protein, Fis family DEH84_00440 PF01590 GAF domain DEH84_00445 PF00593 TonB dependent receptor DEH84_00445 PF07715 TonB-dependent Receptor Plug Domain DEH84_00450 PF05280 Flagellar transcriptional activator (FlhC) DEH84_00455 PF05247 Flagellar transcriptional activator (FlhD) DEH84_00465 PF00578 AhpC/TSA family DEH84_00465 PF10417 C-terminal domain of 1-Cys peroxiredoxin DEH84_00470 PF13192 Thioredoxin domain DEH84_00470 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_00480 PF13532 2OG-Fe(II) oxygenase superfamily DEH84_00485 PF07687 Peptidase dimerisation domain DEH84_00485 PF01546 Peptidase family M20/M25/M40 DEH84_00500 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DEH84_00500 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DEH84_00505 PF03466 LysR substrate binding domain DEH84_00505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_00530 PF00270 DEAD/DEAH box helicase DEH84_00530 PF00271 Helicase conserved C-terminal domain DEH84_00530 PF17764 3′ DNA-binding domain (3′BD) DEH84_00530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DEH84_00530 PF18074 Primosomal protein N C-terminal domain DEH84_00545 PF07859 alpha/beta hydrolase fold DEH84_00550 PF17200 Single Cache domain 2 DEH84_00550 PF07730 Histidine kinase DEH84_00555 PF00196 Bacterial regulatory proteins, luxR family DEH84_00555 PF00072 Response regulator receiver domain DEH84_00560 PF08447 PAS fold DEH84_00560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_00565 PF00999 Sodium/hydrogen exchanger family DEH84_00565 PF02254 TrkA-N domain DEH84_00570 PF02560 Cyanate lyase C-terminal domain DEH84_00580 PF03707 Bacterial signalling protein N terminal repeat DEH84_00580 PF00563 EAL domain DEH84_00580 PF00990 Diguanylate cyclase, GGDEF domain DEH84_00600 PF04379 ApaG domain DEH84_00605 PF00834 Ribulose-phosphate 3 epimerase family DEH84_00630 PF07730 Histidine kinase DEH84_00630 PF05231 MASE1 DEH84_00630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_00635 PF00196 Bacterial regulatory proteins, luxR family DEH84_00635 PF00072 Response regulator receiver domain DEH84_00655 PF07715 TonB-dependent Receptor Plug Domain DEH84_00655 PF00593 TonB dependent receptor DEH84_00660 PF00155 Aminotransferase class I and II DEH84_00670 PF00753 Metallo-beta-lactamase superfamily DEH84_00675 PF17516 ProQ C-terminal domain DEH84_00675 PF04352 ProQ/FINO family DEH84_00685 PF00486 Transcriptional regulatory protein, C terminal DEH84_00685 PF00072 Response regulator receiver domain DEH84_00690 PF00012 Hsp70 protein DEH84_00695 PF04717 Type VI secretion system, phage-baseplate injector DEH84_00695 PF16671 Actin cross-linking domain DEH84_00705 PF13419 Haloacid dehalogenase-like hydrolase DEH84_00715 PF00425 chorismate binding enzyme DEH84_00715 PF04715 Anthranilate synthase component I, N terminal region DEH84_00725 PF00117 Glutamine amidotransferase class-I DEH84_00730 PF02885 Glycosyl transferase family, helical bundle domain DEH84_00730 PF00591 Glycosyl transferase family, a/b domain DEH84_00735 PF00218 Indole-3-glycerol phosphate synthase DEH84_00740 PF03167 Uracil DNA glycosylase superfamily DEH84_00770 PF02449 Beta-galactosidase DEH84_00770 PF08533 Beta-galactosidase C-terminal domain DEH84_00770 PF08532 Beta-galactosidase trimerisation domain DEH84_00810 PF00009 Elongation factor Tu GTP binding domain DEH84_00810 PF03144 Elongation factor Tu domain 2 DEH84_00810 PF03143 Elongation factor Tu C-terminal domain DEH84_00825 PF00467 KOW motif DEH84_00825 PF02357 Transcription termination factor nusG DEH84_00830 PF03946 Ribosomal protein L11, N-terminal domain DEH84_00830 PF00298 Ribosomal protein L11, RNA binding domain DEH84_00835 PF00687 Ribosomal protein L1p/L10e family DEH84_00840 PF00466 Ribosomal protein L10 DEH84_00845 PF00542 Ribosomal protein L7/L12 C-terminal domain DEH84_00845 PF16320 Ribosomal protein L7/L12 dimerisation domain DEH84_00850 PF04565 RNA polymerase Rpb2, domain 3 DEH84_00850 PF04561 RNA polymerase Rpb2, domain 2 DEH84_00850 PF04560 RNA polymerase Rpb2, domain 7 DEH84_00850 PF10385 RNA polymerase beta subunit external 1 domain DEH84_00850 PF04563 RNA polymerase beta subunit DEH84_00850 PF00562 RNA polymerase Rpb2, domain 6 DEH84_00855 PF05000 RNA polymerase Rpb1, domain 4 DEH84_00855 PF04983 RNA polymerase Rpb1, domain 3 DEH84_00855 PF04998 RNA polymerase Rpb1, domain 5 DEH84_00855 PF04997 RNA polymerase Rpb1, domain 1 DEH84_00855 PF00623 RNA polymerase Rpb1, domain 2 DEH84_00865 PF07690 Major Facilitator Superfamily DEH84_00870 PF12419 SNF2 Helicase protein DEH84_00870 PF00176 SNF2 family N-terminal domain DEH84_00870 PF00271 Helicase conserved C-terminal domain DEH84_00890 PF00164 Ribosomal protein S12/S23 DEH84_00895 PF00177 Ribosomal protein S7p/S5e DEH84_00900 PF00009 Elongation factor Tu GTP binding domain DEH84_00900 PF03764 Elongation factor G, domain IV DEH84_00900 PF00679 Elongation factor G C-terminus DEH84_00900 PF03144 Elongation factor Tu domain 2 DEH84_00900 PF14492 Elongation Factor G, domain II DEH84_00905 PF00009 Elongation factor Tu GTP binding domain DEH84_00905 PF03143 Elongation factor Tu C-terminal domain DEH84_00905 PF03144 Elongation factor Tu domain 2 DEH84_00910 PF00338 Ribosomal protein S10p/S20e DEH84_00915 PF00297 Ribosomal protein L3 DEH84_00920 PF00573 Ribosomal protein L4/L1 family DEH84_00925 PF00276 Ribosomal protein L23 DEH84_00930 PF03947 Ribosomal Proteins L2, C-terminal domain DEH84_00930 PF00181 Ribosomal Proteins L2, RNA binding domain DEH84_00935 PF00203 Ribosomal protein S19 DEH84_00940 PF00237 Ribosomal protein L22p/L17e DEH84_00945 PF00189 Ribosomal protein S3, C-terminal domain DEH84_00945 PF07650 KH domain DEH84_00950 PF00252 Ribosomal protein L16p/L10e DEH84_00955 PF00831 Ribosomal L29 protein DEH84_00960 PF00366 Ribosomal protein S17 DEH84_00965 PF08534 Redoxin DEH84_00970 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DEH84_00970 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_00975 PF01180 Dihydroorotate dehydrogenase DEH84_00980 PF01979 Amidohydrolase family DEH84_00985 PF07687 Peptidase dimerisation domain DEH84_00985 PF01546 Peptidase family M20/M25/M40 DEH84_00990 PF03692 Putative zinc- or iron-chelating domain DEH84_00995 PF00440 Bacterial regulatory proteins, tetR family DEH84_00995 PF08362 YcdC-like protein, C-terminal region DEH84_01000 PF09084 NMT1/THI5 like DEH84_01005 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_01010 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_01015 PF00005 ABC transporter DEH84_01020 PF00793 DAHP synthetase I family DEH84_01025 PF00072 Response regulator receiver domain DEH84_01025 PF00486 Transcriptional regulatory protein, C terminal DEH84_01030 PF00672 HAMP domain DEH84_01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_01030 PF00512 His Kinase A (phospho-acceptor) domain DEH84_01045 PF01970 Tripartite tricarboxylate transporter TctA family DEH84_01055 PF00196 Bacterial regulatory proteins, luxR family DEH84_01055 PF00072 Response regulator receiver domain DEH84_01060 PF00512 His Kinase A (phospho-acceptor) domain DEH84_01060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_01060 PF00072 Response regulator receiver domain DEH84_01060 PF01627 Hpt domain DEH84_01060 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEH84_01060 PF00989 PAS fold DEH84_01070 PF01544 CorA-like Mg2+ transporter protein DEH84_01085 PF12697 Alpha/beta hydrolase family DEH84_01090 PF03706 Lysylphosphatidylglycerol synthase TM region DEH84_01095 PF13091 PLD-like domain DEH84_01100 PF03372 Endonuclease/Exonuclease/phosphatase family DEH84_01130 PF01274 Malate synthase DEH84_01140 PF03466 LysR substrate binding domain DEH84_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_01155 PF03793 PASTA domain DEH84_01155 PF00069 Protein kinase domain DEH84_01160 PF00750 tRNA synthetases class I (R) DEH84_01160 PF05746 DALR anticodon binding domain DEH84_01160 PF03485 Arginyl tRNA synthetase N terminal domain DEH84_01170 PF01323 DSBA-like thioredoxin domain DEH84_01180 PF00005 ABC transporter DEH84_01185 PF04552 Sigma-54, DNA binding domain DEH84_01185 PF04963 Sigma-54 factor, core binding domain DEH84_01185 PF00309 Sigma-54 factor, Activator interacting domain (AID) DEH84_01190 PF01170 Putative RNA methylase family UPF0020 DEH84_01190 PF02926 THUMP domain DEH84_01195 PF04452 RNA methyltransferase DEH84_01300 PF04361 Protein of unknown function (DUF494) DEH84_01320 PF00162 Phosphoglycerate kinase DEH84_01340 PF00561 alpha/beta hydrolase fold DEH84_01345 PF02887 Pyruvate kinase, alpha/beta domain DEH84_01345 PF00224 Pyruvate kinase, barrel domain DEH84_01350 PF01116 Fructose-bisphosphate aldolase class-II DEH84_01355 PF12697 Alpha/beta hydrolase family DEH84_01360 PF00072 Response regulator receiver domain DEH84_01360 PF01627 Hpt domain DEH84_01360 PF00512 His Kinase A (phospho-acceptor) domain DEH84_01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_01360 PF17149 Periplasmic sensor domain found in signal transduction proteins DEH84_01360 PF00672 HAMP domain DEH84_01365 PF01259 SAICAR synthetase DEH84_01375 PF01926 50S ribosome-binding GTPase DEH84_01380 PF00034 Cytochrome c DEH84_01385 PF05140 ResB-like family DEH84_01390 PF01578 Cytochrome C assembly protein DEH84_01415 PF00795 Carbon-nitrogen hydrolase DEH84_01425 PF05567 Neisseria PilC beta-propeller domain DEH84_01450 PF00114 Pilin (bacterial filament) DEH84_01450 PF07963 Prokaryotic N-terminal methylation motif DEH84_01455 PF00581 Rhodanese-like domain DEH84_01460 PF05567 Neisseria PilC beta-propeller domain DEH84_01485 PF00085 Thioredoxin DEH84_01490 PF00731 AIR carboxylase DEH84_01495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DEH84_01495 PF02222 ATP-grasp domain DEH84_01500 PF01300 Telomere recombination DEH84_01500 PF03481 Putative GTP-binding controlling metal-binding DEH84_01520 PF00814 Glycoprotease family DEH84_01530 PF03167 Uracil DNA glycosylase superfamily DEH84_01535 PF01544 CorA-like Mg2+ transporter protein DEH84_01540 PF00490 Delta-aminolevulinic acid dehydratase DEH84_01565 PF00768 D-alanyl-D-alanine carboxypeptidase DEH84_01565 PF07943 Penicillin-binding protein 5, C-terminal domain DEH84_01570 PF04359 Protein of unknown function (DUF493) DEH84_01575 PF02699 Preprotein translocase subunit DEH84_01580 PF13721 SecD export protein N-terminal TM region DEH84_01580 PF07549 SecD/SecF GG Motif DEH84_01580 PF02355 Protein export membrane protein DEH84_01585 PF02355 Protein export membrane protein DEH84_01585 PF07549 SecD/SecF GG Motif DEH84_01595 PF01169 Uncharacterized protein family UPF0016 DEH84_01600 PF00563 EAL domain DEH84_01600 PF03707 Bacterial signalling protein N terminal repeat DEH84_01600 PF00990 Diguanylate cyclase, GGDEF domain DEH84_01605 PF01435 Peptidase family M48 DEH84_01610 PF00551 Formyl transferase DEH84_01610 PF02911 Formyl transferase, C-terminal domain DEH84_01615 PF01327 Polypeptide deformylase DEH84_01620 PF01476 LysM domain DEH84_01625 PF17782 DprA winged helix domain DEH84_01625 PF02481 DNA recombination-mediator protein A DEH84_01630 PF03099 Biotin/lipoate A/B protein ligase family DEH84_01635 PF04055 Radical SAM superfamily DEH84_01635 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DEH84_01650 PF04073 Aminoacyl-tRNA editing domain DEH84_01655 PF08359 YsiA-like protein, C-terminal region DEH84_01655 PF00440 Bacterial regulatory proteins, tetR family DEH84_01660 PF00106 short chain dehydrogenase DEH84_01665 PF07859 alpha/beta hydrolase fold DEH84_01670 PF13193 AMP-binding enzyme C-terminal domain DEH84_01670 PF00501 AMP-binding enzyme DEH84_01675 PF00664 ABC transporter transmembrane region DEH84_01675 PF00005 ABC transporter DEH84_01675 PF03412 Peptidase C39 family DEH84_01680 PF13533 Biotin-lipoyl like DEH84_01700 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_01700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_01700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_01700 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEH84_01705 PF07729 FCD domain DEH84_01705 PF00392 Bacterial regulatory proteins, gntR family DEH84_01725 PF16655 PhoD-like phosphatase, N-terminal domain DEH84_01725 PF09423 PhoD-like phosphatase DEH84_01730 PF00440 Bacterial regulatory proteins, tetR family DEH84_01745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_01745 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEH84_01745 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_01745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_01750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEH84_01750 PF00378 Enoyl-CoA hydratase/isomerase DEH84_01750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEH84_01755 PF00108 Thiolase, N-terminal domain DEH84_01755 PF02803 Thiolase, C-terminal domain DEH84_01765 PF00378 Enoyl-CoA hydratase/isomerase DEH84_01770 PF00990 Diguanylate cyclase, GGDEF domain DEH84_01770 PF17151 Periplasmic sensor domain DEH84_01780 PF03061 Thioesterase superfamily DEH84_01785 PF00664 ABC transporter transmembrane region DEH84_01785 PF00005 ABC transporter DEH84_01795 PF01145 SPFH domain / Band 7 family DEH84_01800 PF01979 Amidohydrolase family DEH84_01810 PF00291 Pyridoxal-phosphate dependent enzyme DEH84_01815 PF02683 Cytochrome C biogenesis protein transmembrane region DEH84_01815 PF11412 Disulphide bond corrector protein DsbC DEH84_01820 PF07690 Major Facilitator Superfamily DEH84_01830 PF00194 Eukaryotic-type carbonic anhydrase DEH84_01835 PF02075 Crossover junction endodeoxyribonuclease RuvC DEH84_01855 PF05567 Neisseria PilC beta-propeller domain DEH84_01860 PF07963 Prokaryotic N-terminal methylation motif DEH84_01860 PF14245 Type IV pilin PilA DEH84_01865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_01865 PF00360 Phytochrome region DEH84_01865 PF08446 PAS fold DEH84_01865 PF00512 His Kinase A (phospho-acceptor) domain DEH84_01865 PF01590 GAF domain DEH84_01870 PF01808 AICARFT/IMPCHase bienzyme DEH84_01870 PF02142 MGS-like domain DEH84_01875 PF02954 Bacterial regulatory protein, Fis family DEH84_01880 PF01207 Dihydrouridine synthase (Dus) DEH84_01885 PF03922 OmpW family DEH84_01890 PF09335 SNARE associated Golgi protein DEH84_01900 PF00696 Amino acid kinase family DEH84_01915 PF00440 Bacterial regulatory proteins, tetR family DEH84_01930 PF00293 NUDIX domain DEH84_01940 PF00378 Enoyl-CoA hydratase/isomerase DEH84_01950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DEH84_01950 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_01955 PF01070 FMN-dependent dehydrogenase DEH84_01970 PF18331 PKHD-type hydroxylase C-terminal domain DEH84_01970 PF13640 2OG-Fe(II) oxygenase superfamily DEH84_01975 PF00593 TonB dependent receptor DEH84_01975 PF07715 TonB-dependent Receptor Plug Domain DEH84_01980 PF00210 Ferritin-like domain DEH84_01985 PF03741 Integral membrane protein TerC family DEH84_01995 PF07715 TonB-dependent Receptor Plug Domain DEH84_01995 PF00593 TonB dependent receptor DEH84_01995 PF07660 Secretin and TonB N terminus short domain DEH84_02000 PF13181 Tetratricopeptide repeat DEH84_02000 PF01435 Peptidase family M48 DEH84_02005 PF01967 MoaC family DEH84_02010 PF11846 Virulence factor membrane-bound polymerase, C-terminal DEH84_02010 PF04932 O-Antigen ligase DEH84_02010 PF15864 Protein glycosylation ligase DEH84_02015 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DEH84_02020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DEH84_02025 PF07475 HPr Serine kinase C-terminal domain DEH84_02025 PF02603 HPr Serine kinase N terminus DEH84_02030 PF01475 Ferric uptake regulator family DEH84_02035 PF04355 SmpA / OmlA family DEH84_02045 PF01618 MotA/TolQ/ExbB proton channel family DEH84_02050 PF02472 Biopolymer transport protein ExbD/TolR DEH84_02055 PF01048 Phosphorylase superfamily DEH84_02055 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus DEH84_02060 PF01381 Helix-turn-helix DEH84_02070 PF02222 ATP-grasp domain DEH84_02075 PF00672 HAMP domain DEH84_02075 PF01627 Hpt domain DEH84_02075 PF00072 Response regulator receiver domain DEH84_02075 PF00512 His Kinase A (phospho-acceptor) domain DEH84_02075 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_02085 PF01048 Phosphorylase superfamily DEH84_02100 PF02653 Branched-chain amino acid transport system / permease component DEH84_02105 PF02653 Branched-chain amino acid transport system / permease component DEH84_02105 PF11862 Domain of unknown function (DUF3382) DEH84_02110 PF00005 ABC transporter DEH84_02110 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEH84_02115 PF00005 ABC transporter DEH84_02125 PF09339 IclR helix-turn-helix domain DEH84_02130 PF03061 Thioesterase superfamily DEH84_02135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_02135 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEH84_02135 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_02135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_02140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEH84_02140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEH84_02140 PF00378 Enoyl-CoA hydratase/isomerase DEH84_02145 PF02803 Thiolase, C-terminal domain DEH84_02145 PF00108 Thiolase, N-terminal domain DEH84_02160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_02160 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_02160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_02165 PF13193 AMP-binding enzyme C-terminal domain DEH84_02165 PF00501 AMP-binding enzyme DEH84_02200 PF00436 Single-strand binding protein family DEH84_02205 PF13230 Glutamine amidotransferases class-II DEH84_02210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_02210 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_02210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_02215 PF00682 HMGL-like DEH84_02220 PF00289 Biotin carboxylase, N-terminal domain DEH84_02220 PF00364 Biotin-requiring enzyme DEH84_02220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEH84_02220 PF02785 Biotin carboxylase C-terminal domain DEH84_02225 PF00378 Enoyl-CoA hydratase/isomerase DEH84_02230 PF01039 Carboxyl transferase domain DEH84_02235 PF00108 Thiolase, N-terminal domain DEH84_02235 PF02803 Thiolase, C-terminal domain DEH84_02240 PF00106 short chain dehydrogenase DEH84_02245 PF04247 Invasion gene expression up-regulator, SirB DEH84_02250 PF02264 LamB porin DEH84_02250 PF11471 Maltoporin periplasmic N-terminal extension DEH84_02255 PF00311 Phosphoenolpyruvate carboxylase DEH84_02260 PF09382 RQC domain DEH84_02260 PF00270 DEAD/DEAH box helicase DEH84_02260 PF16124 RecQ zinc-binding DEH84_02260 PF00570 HRDC domain DEH84_02260 PF00271 Helicase conserved C-terminal domain DEH84_02265 PF13609 Gram-negative porin DEH84_02270 PF13609 Gram-negative porin DEH84_02275 PF13609 Gram-negative porin DEH84_02280 PF07021 Methionine biosynthesis protein MetW DEH84_02280 PF00561 alpha/beta hydrolase fold DEH84_02285 PF00561 alpha/beta hydrolase fold DEH84_02290 PF01645 Conserved region in glutamate synthase DEH84_02295 PF13417 Glutathione S-transferase, N-terminal domain DEH84_02295 PF00043 Glutathione S-transferase, C-terminal domain DEH84_02305 PF00206 Lyase DEH84_02305 PF08328 Adenylosuccinate lyase C-terminal DEH84_02310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DEH84_02315 PF01557 Fumarylacetoacetate (FAA) hydrolase family DEH84_02330 PF17760 UvrA interaction domain DEH84_02330 PF17755 UvrA DNA-binding domain DEH84_02340 PF02310 B12 binding domain DEH84_02340 PF02607 B12 binding domain DEH84_02340 PF02965 Vitamin B12 dependent methionine synthase, activation domain DEH84_02340 PF00809 Pterin binding enzyme DEH84_02340 PF02574 Homocysteine S-methyltransferase DEH84_02350 PF00154 recA bacterial DNA recombination protein DEH84_02355 PF02631 RecX family DEH84_02360 PF00549 CoA-ligase DEH84_02360 PF08442 ATP-grasp domain DEH84_02365 PF02629 CoA binding domain DEH84_02365 PF00549 CoA-ligase DEH84_02370 PF03741 Integral membrane protein TerC family DEH84_02375 PF03793 PASTA domain DEH84_02375 PF00069 Protein kinase domain DEH84_02385 PF16697 Inner membrane component of T3SS, cytoplasmic domain DEH84_02390 PF12706 Beta-lactamase superfamily domain DEH84_02395 PF07963 Prokaryotic N-terminal methylation motif DEH84_02395 PF00114 Pilin (bacterial filament) DEH84_02415 PF02779 Transketolase, pyrimidine binding domain DEH84_02415 PF02780 Transketolase, C-terminal domain DEH84_02415 PF00456 Transketolase, thiamine diphosphate binding domain DEH84_02420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DEH84_02420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DEH84_02430 PF04151 Bacterial pre-peptidase C-terminal domain DEH84_02430 PF00082 Subtilase family DEH84_02440 PF08279 HTH domain DEH84_02440 PF03099 Biotin/lipoate A/B protein ligase family DEH84_02440 PF02237 Biotin protein ligase C terminal domain DEH84_02450 PF01131 DNA topoisomerase DEH84_02450 PF01751 Toprim domain DEH84_02455 PF10996 Beta-Casp domain DEH84_02455 PF00753 Metallo-beta-lactamase superfamily DEH84_02455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DEH84_02460 PF00174 Oxidoreductase molybdopterin binding domain DEH84_02465 PF01794 Ferric reductase like transmembrane component DEH84_02505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_02505 PF02203 Tar ligand binding domain homologue DEH84_02505 PF00672 HAMP domain DEH84_02520 PF03695 Uncharacterised protein family (UPF0149) DEH84_02520 PF02810 SEC-C motif DEH84_02525 PF16177 Acetyl-coenzyme A synthetase N-terminus DEH84_02525 PF00501 AMP-binding enzyme DEH84_02525 PF13193 AMP-binding enzyme C-terminal domain DEH84_02530 PF16655 PhoD-like phosphatase, N-terminal domain DEH84_02530 PF09423 PhoD-like phosphatase DEH84_02540 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase DEH84_02565 PF01171 PP-loop family DEH84_02575 PF12804 MobA-like NTP transferase domain DEH84_02575 PF00132 Bacterial transferase hexapeptide (six repeats) DEH84_02580 PF00684 DnaJ central domain DEH84_02580 PF01556 DnaJ C terminal domain DEH84_02580 PF00226 DnaJ domain DEH84_02585 PF01037 Lrp/AsnC ligand binding domain DEH84_02585 PF13404 AsnC-type helix-turn-helix domain DEH84_02590 PF01380 SIS domain DEH84_02600 PF09905 DNA-binding protein VF530 DEH84_02605 PF00561 alpha/beta hydrolase fold DEH84_02610 PF00892 EamA-like transporter family DEH84_02615 PF07690 Major Facilitator Superfamily DEH84_02620 PF00106 short chain dehydrogenase DEH84_02625 PF00106 short chain dehydrogenase DEH84_02665 PF00067 Cytochrome P450 DEH84_02685 PF00465 Iron-containing alcohol dehydrogenase DEH84_02690 PF00850 Histone deacetylase domain DEH84_02695 PF00583 Acetyltransferase (GNAT) family DEH84_02695 PF13380 CoA binding domain DEH84_02695 PF13607 Succinyl-CoA ligase like flavodoxin domain DEH84_02700 PF00885 6,7-dimethyl-8-ribityllumazine synthase DEH84_02710 PF00270 DEAD/DEAH box helicase DEH84_02710 PF00271 Helicase conserved C-terminal domain DEH84_02715 PF07690 Major Facilitator Superfamily DEH84_02725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEH84_02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_02730 PF03466 LysR substrate binding domain DEH84_02735 PF13378 Enolase C-terminal domain-like DEH84_02735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DEH84_02740 PF02426 Muconolactone delta-isomerase DEH84_02745 PF04444 Catechol dioxygenase N terminus DEH84_02745 PF00775 Dioxygenase DEH84_02760 PF00817 impB/mucB/samB family DEH84_02760 PF11799 impB/mucB/samB family C-terminal domain DEH84_02780 PF02798 Glutathione S-transferase, N-terminal domain DEH84_02780 PF00043 Glutathione S-transferase, C-terminal domain DEH84_02785 PF02719 Polysaccharide biosynthesis protein DEH84_02790 PF09308 LuxQ, periplasmic DEH84_02790 PF00512 His Kinase A (phospho-acceptor) domain DEH84_02790 PF00072 Response regulator receiver domain DEH84_02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_02795 PF00753 Metallo-beta-lactamase superfamily DEH84_02795 PF16123 Hydroxyacylglutathione hydrolase C-terminus DEH84_02800 PF03572 Peptidase family S41 DEH84_02800 PF13180 PDZ domain DEH84_02805 PF00899 ThiF family DEH84_02810 PF03641 Possible lysine decarboxylase DEH84_02820 PF00829 Ribosomal prokaryotic L21 protein DEH84_02825 PF01016 Ribosomal L27 protein DEH84_02835 PF00696 Amino acid kinase family DEH84_02835 PF01472 PUA domain DEH84_02845 PF00293 NUDIX domain DEH84_02850 PF04073 Aminoacyl-tRNA editing domain DEH84_02850 PF03129 Anticodon binding domain DEH84_02850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEH84_02855 PF01464 Transglycosylase SLT domain DEH84_02855 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DEH84_02860 PF02441 Flavoprotein DEH84_02865 PF00462 Glutaredoxin DEH84_02875 PF05175 Methyltransferase small domain DEH84_02875 PF17827 PrmC N-terminal domain DEH84_02880 PF03462 PCRF domain DEH84_02880 PF00472 RF-1 domain DEH84_02885 PF01488 Shikimate / quinate 5-dehydrogenase DEH84_02885 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain DEH84_02885 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain DEH84_02900 PF01242 6-pyruvoyl tetrahydropterin synthase DEH84_02905 PF00202 Aminotransferase class-III DEH84_02920 PF00155 Aminotransferase class I and II DEH84_02920 PF00392 Bacterial regulatory proteins, gntR family DEH84_02925 PF01027 Inhibitor of apoptosis-promoting Bax1 DEH84_02935 PF03466 LysR substrate binding domain DEH84_02935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_02940 PF08402 TOBE domain DEH84_02940 PF00005 ABC transporter DEH84_02945 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_02950 PF13416 Bacterial extracellular solute-binding protein DEH84_02955 PF00155 Aminotransferase class I and II DEH84_02965 PF00919 Uncharacterized protein family UPF0004 DEH84_02965 PF04055 Radical SAM superfamily DEH84_02965 PF01938 TRAM domain DEH84_02975 PF00483 Nucleotidyl transferase DEH84_02980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEH84_02980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal DEH84_02985 PF00374 Nickel-dependent hydrogenase DEH84_02990 PF04955 HupE / UreJ protein DEH84_02995 PF01292 Prokaryotic cytochrome b561 DEH84_03005 PF01750 Hydrogenase maturation protease DEH84_03010 PF01455 HupF/HypC family DEH84_03015 PF07449 Hydrogenase-1 expression protein HyaE DEH84_03020 PF04809 HupH hydrogenase expression protein, C-terminal conserved region DEH84_03025 PF00301 Rubredoxin DEH84_03030 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE DEH84_03040 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DEH84_03045 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEH84_03055 PF01455 HupF/HypC family DEH84_03060 PF01924 Hydrogenase formation hypA family DEH84_03065 PF00586 AIR synthase related protein, N-terminal domain DEH84_03065 PF02769 AIR synthase related protein, C-terminal domain DEH84_03070 PF00072 Response regulator receiver domain DEH84_03070 PF00158 Sigma-54 interaction domain DEH84_03070 PF02954 Bacterial regulatory protein, Fis family DEH84_03080 PF00374 Nickel-dependent hydrogenase DEH84_03085 PF02743 Cache domain DEH84_03085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_03085 PF00512 His Kinase A (phospho-acceptor) domain DEH84_03090 PF04172 LrgB-like family DEH84_03095 PF03788 LrgA family DEH84_03100 PF00360 Phytochrome region DEH84_03100 PF00990 Diguanylate cyclase, GGDEF domain DEH84_03100 PF01590 GAF domain DEH84_03100 PF00563 EAL domain DEH84_03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_03105 PF00989 PAS fold DEH84_03105 PF00512 His Kinase A (phospho-acceptor) domain DEH84_03115 PF00107 Zinc-binding dehydrogenase DEH84_03115 PF08240 Alcohol dehydrogenase GroES-like domain DEH84_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_03120 PF00183 Hsp90 protein DEH84_03135 PF00572 Ribosomal protein L13 DEH84_03140 PF00380 Ribosomal protein S9/S16 DEH84_03145 PF02774 Semialdehyde dehydrogenase, dimerisation domain DEH84_03145 PF01118 Semialdehyde dehydrogenase, NAD binding domain DEH84_03160 PF01521 Iron-sulphur cluster biosynthesis DEH84_03165 PF03702 Anhydro-N-acetylmuramic acid kinase DEH84_03170 PF08460 Bacterial SH3 domain DEH84_03170 PF01551 Peptidase family M23 DEH84_03195 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region DEH84_03195 PF01243 Pyridoxamine 5'-phosphate oxidase DEH84_03200 PF01625 Peptide methionine sulfoxide reductase DEH84_03210 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DEH84_03215 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain DEH84_03215 PF01464 Transglycosylase SLT domain DEH84_03220 PF00464 Serine hydroxymethyltransferase DEH84_03225 PF03477 ATP cone domain DEH84_03250 PF05567 Neisseria PilC beta-propeller domain DEH84_03255 PF00114 Pilin (bacterial filament) DEH84_03255 PF07963 Prokaryotic N-terminal methylation motif DEH84_03265 PF01872 RibD C-terminal domain DEH84_03265 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DEH84_03270 PF00677 Lumazine binding domain DEH84_03275 PF00925 GTP cyclohydrolase II DEH84_03275 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DEH84_03280 PF00885 6,7-dimethyl-8-ribityllumazine synthase DEH84_03285 PF01029 NusB family DEH84_03290 PF00069 Protein kinase domain DEH84_03290 PF03793 PASTA domain DEH84_03300 PF02541 Ppx/GppA phosphatase family DEH84_03320 PF02609 Exonuclease VII small subunit DEH84_03325 PF00348 Polyprenyl synthetase DEH84_03330 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DEH84_03330 PF02780 Transketolase, C-terminal domain DEH84_03330 PF02779 Transketolase, pyrimidine binding domain DEH84_03345 PF00206 Lyase DEH84_03345 PF14698 Argininosuccinate lyase C-terminal DEH84_03350 PF06580 Histidine kinase DEH84_03350 PF07694 5TMR of 5TMR-LYT DEH84_03355 PF04397 LytTr DNA-binding domain DEH84_03355 PF00072 Response regulator receiver domain DEH84_03360 PF04344 Chemotaxis phosphatase, CheZ DEH84_03365 PF00072 Response regulator receiver domain DEH84_03370 PF00691 OmpA family DEH84_03370 PF13677 Membrane MotB of proton-channel complex MotA/MotB DEH84_03375 PF01618 MotA/TolQ/ExbB proton channel family DEH84_03380 PF05280 Flagellar transcriptional activator (FlhC) DEH84_03385 PF05247 Flagellar transcriptional activator (FlhD) DEH84_03390 PF00487 Fatty acid desaturase DEH84_03395 PF00175 Oxidoreductase NAD-binding domain DEH84_03395 PF00970 Oxidoreductase FAD-binding domain DEH84_03395 PF00042 Globin DEH84_03405 PF00310 Glutamine amidotransferases class-II DEH84_03405 PF04898 Glutamate synthase central domain DEH84_03405 PF01645 Conserved region in glutamate synthase DEH84_03405 PF01493 GXGXG motif DEH84_03410 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DEH84_03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_03415 PF00005 ABC transporter DEH84_03420 PF02405 Permease MlaE DEH84_03425 PF02470 MlaD protein DEH84_03430 PF04333 MlaA lipoprotein DEH84_03445 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DEH84_03445 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DEH84_03450 PF00923 Transaldolase/Fructose-6-phosphate aldolase DEH84_03455 PF00342 Phosphoglucose isomerase DEH84_03460 PF13419 Haloacid dehalogenase-like hydrolase DEH84_03465 PF00140 Sigma-70 factor, region 1.2 DEH84_03465 PF04542 Sigma-70 region 2 DEH84_03465 PF04545 Sigma-70, region 4 DEH84_03485 PF13406 Transglycosylase SLT domain DEH84_03490 PF00501 AMP-binding enzyme DEH84_03495 PF00072 Response regulator receiver domain DEH84_03505 PF03358 NADPH-dependent FMN reductase DEH84_03515 PF00512 His Kinase A (phospho-acceptor) domain DEH84_03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_03525 PF00672 HAMP domain DEH84_03525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_03525 PF02203 Tar ligand binding domain homologue DEH84_03530 PF00155 Aminotransferase class I and II DEH84_03540 PF01205 Uncharacterized protein family UPF0029 DEH84_03540 PF09186 Domain of unknown function (DUF1949) DEH84_03545 PF00171 Aldehyde dehydrogenase family DEH84_03550 PF00202 Aminotransferase class-III DEH84_03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_03555 PF03466 LysR substrate binding domain DEH84_03575 PF01569 PAP2 superfamily DEH84_03580 PF00534 Glycosyl transferases group 1 DEH84_03580 PF13439 Glycosyltransferase Family 4 DEH84_03585 PF13439 Glycosyltransferase Family 4 DEH84_03585 PF00534 Glycosyl transferases group 1 DEH84_03590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DEH84_03595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DEH84_03605 PF10017 Histidine-specific methyltransferase, SAM-dependent DEH84_03610 PF12867 DinB superfamily DEH84_03610 PF03781 Sulfatase-modifying factor enzyme 1 DEH84_03615 PF05067 Manganese containing catalase DEH84_03620 PF02535 ZIP Zinc transporter DEH84_03635 PF00535 Glycosyl transferase family 2 DEH84_03640 PF16861 Carbamoyltransferase C-terminus DEH84_03640 PF02543 Carbamoyltransferase N-terminus DEH84_03655 PF13439 Glycosyltransferase Family 4 DEH84_03655 PF00534 Glycosyl transferases group 1 DEH84_03665 PF00270 DEAD/DEAH box helicase DEH84_03665 PF00271 Helicase conserved C-terminal domain DEH84_03665 PF00570 HRDC domain DEH84_03665 PF16124 RecQ zinc-binding DEH84_03665 PF09382 RQC domain DEH84_03695 PF00158 Sigma-54 interaction domain DEH84_03695 PF02954 Bacterial regulatory protein, Fis family DEH84_03695 PF00072 Response regulator receiver domain DEH84_03705 PF00486 Transcriptional regulatory protein, C terminal DEH84_03705 PF00072 Response regulator receiver domain DEH84_03720 PF05736 OprF membrane domain DEH84_03720 PF00691 OmpA family DEH84_03750 PF04552 Sigma-54, DNA binding domain DEH84_03750 PF04963 Sigma-54 factor, core binding domain DEH84_03750 PF00309 Sigma-54 factor, Activator interacting domain (AID) DEH84_03775 PF13439 Glycosyltransferase Family 4 DEH84_03775 PF00534 Glycosyl transferases group 1 DEH84_03785 PF03631 Virulence factor BrkB DEH84_03790 PF01594 AI-2E family transporter DEH84_03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_03815 PF00512 His Kinase A (phospho-acceptor) domain DEH84_03815 PF09308 LuxQ, periplasmic DEH84_03815 PF00072 Response regulator receiver domain DEH84_03825 PF10415 Fumarase C C-terminus DEH84_03825 PF00206 Lyase DEH84_03835 PF00534 Glycosyl transferases group 1 DEH84_03835 PF13579 Glycosyl transferase 4-like domain DEH84_03845 PF00571 CBS domain DEH84_03855 PF00072 Response regulator receiver domain DEH84_03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_03855 PF00512 His Kinase A (phospho-acceptor) domain DEH84_03855 PF09308 LuxQ, periplasmic DEH84_03865 PF00294 pfkB family carbohydrate kinase DEH84_03870 PF01467 Cytidylyltransferase-like DEH84_03880 PF13580 SIS domain DEH84_03900 PF00005 ABC transporter DEH84_03900 PF00664 ABC transporter transmembrane region DEH84_03915 PF00982 Glycosyltransferase family 20 DEH84_03960 PF01515 Phosphate acetyl/butaryl transferase DEH84_03960 PF03949 Malic enzyme, NAD binding domain DEH84_03960 PF00390 Malic enzyme, N-terminal domain DEH84_03965 PF13188 PAS domain DEH84_03965 PF03707 Bacterial signalling protein N terminal repeat DEH84_03965 PF00563 EAL domain DEH84_03965 PF00990 Diguanylate cyclase, GGDEF domain DEH84_03970 PF02563 Polysaccharide biosynthesis/export protein DEH84_03970 PF10531 SLBB domain DEH84_03975 PF01189 16S rRNA methyltransferase RsmB/F DEH84_03975 PF01029 NusB family DEH84_03980 PF04116 Fatty acid hydroxylase superfamily DEH84_03985 PF12833 Helix-turn-helix domain DEH84_03985 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEH84_03990 PF00672 HAMP domain DEH84_03990 PF02203 Tar ligand binding domain homologue DEH84_03990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_03995 PF01699 Sodium/calcium exchanger protein DEH84_04005 PF09997 Predicted membrane protein (DUF2238) DEH84_04010 PF04286 Protein of unknown function (DUF445) DEH84_04020 PF03069 Acetamidase/Formamidase family DEH84_04025 PF00005 ABC transporter DEH84_04030 PF00005 ABC transporter DEH84_04030 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEH84_04035 PF02653 Branched-chain amino acid transport system / permease component DEH84_04040 PF11862 Domain of unknown function (DUF3382) DEH84_04040 PF02653 Branched-chain amino acid transport system / permease component DEH84_04055 PF00072 Response regulator receiver domain DEH84_04055 PF00486 Transcriptional regulatory protein, C terminal DEH84_04065 PF00551 Formyl transferase DEH84_04070 PF00579 tRNA synthetases class I (W and Y) DEH84_04080 PF03976 Polyphosphate kinase 2 (PPK2) DEH84_04085 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEH84_04085 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DEH84_04090 PF00313 'Cold-shock' DNA-binding domain DEH84_04100 PF08212 Lipocalin-like domain DEH84_04110 PF01434 Peptidase family M41 DEH84_04110 PF06480 FtsH Extracellular DEH84_04110 PF17862 AAA+ lid domain DEH84_04110 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_04115 PF01638 HxlR-like helix-turn-helix DEH84_04125 PF00881 Nitroreductase family DEH84_04130 PF01593 Flavin containing amine oxidoreductase DEH84_04140 PF13361 UvrD-like helicase C-terminal domain DEH84_04140 PF00580 UvrD/REP helicase N-terminal domain DEH84_04145 PF01926 50S ribosome-binding GTPase DEH84_04155 PF01207 Dihydrouridine synthase (Dus) DEH84_04165 PF05661 Protein of unknown function (DUF808) DEH84_04170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_04170 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEH84_04170 PF01627 Hpt domain DEH84_04170 PF00072 Response regulator receiver domain DEH84_04170 PF00989 PAS fold DEH84_04170 PF00512 His Kinase A (phospho-acceptor) domain DEH84_04180 PF01883 Iron-sulfur cluster assembly protein DEH84_04180 PF10609 NUBPL iron-transfer P-loop NTPase DEH84_04185 PF03776 Septum formation topological specificity factor MinE DEH84_04190 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DEH84_04195 PF03775 Septum formation inhibitor MinC, C-terminal domain DEH84_04195 PF05209 Septum formation inhibitor MinC, N-terminal domain DEH84_04205 PF08497 Radical SAM N-terminal DEH84_04205 PF04055 Radical SAM superfamily DEH84_04205 PF11842 Domain of unknown function (DUF3362) DEH84_04215 PF03707 Bacterial signalling protein N terminal repeat DEH84_04215 PF00990 Diguanylate cyclase, GGDEF domain DEH84_04215 PF00563 EAL domain DEH84_04235 PF00664 ABC transporter transmembrane region DEH84_04235 PF00005 ABC transporter DEH84_04240 PF03976 Polyphosphate kinase 2 (PPK2) DEH84_04250 PF01553 Acyltransferase DEH84_04260 PF00596 Class II Aldolase and Adducin N-terminal domain DEH84_04265 PF00501 AMP-binding enzyme DEH84_04265 PF13193 AMP-binding enzyme C-terminal domain DEH84_04275 PF13193 AMP-binding enzyme C-terminal domain DEH84_04275 PF00501 AMP-binding enzyme DEH84_04290 PF00171 Aldehyde dehydrogenase family DEH84_04295 PF02653 Branched-chain amino acid transport system / permease component DEH84_04300 PF11862 Domain of unknown function (DUF3382) DEH84_04300 PF02653 Branched-chain amino acid transport system / permease component DEH84_04305 PF00005 ABC transporter DEH84_04305 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEH84_04310 PF00005 ABC transporter DEH84_04315 PF01230 HIT domain DEH84_04320 PF00970 Oxidoreductase FAD-binding domain DEH84_04320 PF00111 2Fe-2S iron-sulfur cluster binding domain DEH84_04320 PF00175 Oxidoreductase NAD-binding domain DEH84_04335 PF00730 HhH-GPD superfamily base excision DNA repair protein DEH84_04335 PF00633 Helix-hairpin-helix motif DEH84_04335 PF10576 Iron-sulfur binding domain of endonuclease III DEH84_04345 PF04536 TPM domain DEH84_04370 PF04060 Putative Fe-S cluster DEH84_04395 PF00245 Alkaline phosphatase DEH84_04420 PF02798 Glutathione S-transferase, N-terminal domain DEH84_04420 PF14834 Glutathione S-transferase, C-terminal domain DEH84_04440 PF00155 Aminotransferase class I and II DEH84_04445 PF17757 UvrB interaction domain DEH84_04445 PF12344 Ultra-violet resistance protein B DEH84_04445 PF02151 UvrB/uvrC motif DEH84_04445 PF04851 Type III restriction enzyme, res subunit DEH84_04445 PF00271 Helicase conserved C-terminal domain DEH84_04475 PF02082 Transcriptional regulator DEH84_04480 PF00266 Aminotransferase class-V DEH84_04485 PF01592 NifU-like N terminal domain DEH84_04490 PF01521 Iron-sulphur cluster biosynthesis DEH84_04495 PF07743 HSCB C-terminal oligomerisation domain DEH84_04500 PF00012 Hsp70 protein DEH84_04505 PF00111 2Fe-2S iron-sulfur cluster binding domain DEH84_04515 PF05199 GMC oxidoreductase DEH84_04515 PF00732 GMC oxidoreductase DEH84_04525 PF00929 Exonuclease DEH84_04545 PF01425 Amidase DEH84_04560 PF17946 RecC C-terminal domain DEH84_04565 PF12705 PD-(D/E)XK nuclease superfamily DEH84_04565 PF00580 UvrD/REP helicase N-terminal domain DEH84_04565 PF13361 UvrD-like helicase C-terminal domain DEH84_04570 PF13538 UvrD-like helicase C-terminal domain DEH84_04575 PF00156 Phosphoribosyl transferase domain DEH84_04580 PF08241 Methyltransferase domain DEH84_04590 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DEH84_04590 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DEH84_04595 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEH84_04600 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 DEH84_04610 PF00510 Cytochrome c oxidase subunit III DEH84_04630 PF02628 Cytochrome oxidase assembly protein DEH84_04635 PF01040 UbiA prenyltransferase family DEH84_04640 PF02630 SCO1/SenC DEH84_04665 PF01227 GTP cyclohydrolase I DEH84_04670 PF04675 DNA ligase N terminus DEH84_04670 PF01068 ATP dependent DNA ligase domain DEH84_04670 PF04679 ATP dependent DNA ligase C terminal region DEH84_04705 PF00691 OmpA family DEH84_04705 PF04972 BON domain DEH84_04720 PF01618 MotA/TolQ/ExbB proton channel family DEH84_04725 PF02472 Biopolymer transport protein ExbD/TolR DEH84_04730 PF02515 CoA-transferase family III DEH84_04750 PF01702 Queuine tRNA-ribosyltransferase DEH84_04755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_04755 PF00512 His Kinase A (phospho-acceptor) domain DEH84_04760 PF02547 Queuosine biosynthesis protein DEH84_04770 PF00271 Helicase conserved C-terminal domain DEH84_04770 PF17191 RecG wedge domain DEH84_04770 PF00270 DEAD/DEAH box helicase DEH84_04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_04775 PF03466 LysR substrate binding domain DEH84_04785 PF01636 Phosphotransferase enzyme family DEH84_04795 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DEH84_04795 PF01612 3'-5' exonuclease DEH84_04795 PF00476 DNA polymerase family A DEH84_04795 PF01367 5'-3' exonuclease, C-terminal SAM fold DEH84_04800 PF02503 Polyphosphate kinase middle domain DEH84_04800 PF13090 Polyphosphate kinase C-terminal domain 2 DEH84_04800 PF13089 Polyphosphate kinase N-terminal domain DEH84_04800 PF17941 Polyphosphate kinase C-terminal domain 1 DEH84_04835 PF00486 Transcriptional regulatory protein, C terminal DEH84_04835 PF00072 Response regulator receiver domain DEH84_04840 PF00672 HAMP domain DEH84_04840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_04840 PF00512 His Kinase A (phospho-acceptor) domain DEH84_04845 PF03061 Thioesterase superfamily DEH84_04850 PF01618 MotA/TolQ/ExbB proton channel family DEH84_04855 PF02472 Biopolymer transport protein ExbD/TolR DEH84_04865 PF00437 Type II/IV secretion system protein DEH84_04870 PF08298 PrkA AAA domain DEH84_04870 PF06798 PrkA serine protein kinase C-terminal domain DEH84_04875 PF04285 Protein of unknown function (DUF444) DEH84_04880 PF04293 SpoVR like protein DEH84_04890 PF01312 FlhB HrpN YscU SpaS Family DEH84_04895 PF00771 FHIPEP family DEH84_04900 PF00448 SRP54-type protein, GTPase domain DEH84_04910 PF04542 Sigma-70 region 2 DEH84_04910 PF04539 Sigma-70 region 3 DEH84_04910 PF04545 Sigma-70, region 4 DEH84_04915 PF02743 Cache domain DEH84_04915 PF00672 HAMP domain DEH84_04915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_04920 PF02203 Tar ligand binding domain homologue DEH84_04920 PF00672 HAMP domain DEH84_04920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_04925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DEH84_04925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DEH84_04930 PF00202 Aminotransferase class-III DEH84_04940 PF01649 Ribosomal protein S20 DEH84_04945 PF03023 Lipid II flippase MurJ DEH84_04950 PF18073 Rubredoxin metal binding domain DEH84_04955 PF03061 Thioesterase superfamily DEH84_04960 PF01168 Alanine racemase, N-terminal domain DEH84_04960 PF00842 Alanine racemase, C-terminal domain DEH84_04965 PF07690 Major Facilitator Superfamily DEH84_04975 PF05872 Bacterial protein of unknown function (DUF853) DEH84_04980 PF01709 Transcriptional regulator DEH84_04985 PF02844 Phosphoribosylglycinamide synthetase, N domain DEH84_04985 PF02843 Phosphoribosylglycinamide synthetase, C domain DEH84_04985 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DEH84_04990 PF01218 Coproporphyrinogen III oxidase DEH84_04995 PF01467 Cytidylyltransferase-like DEH84_05005 PF02590 Predicted SPOUT methyltransferase DEH84_05020 PF13460 NAD(P)H-binding DEH84_05025 PF00575 S1 RNA binding domain DEH84_05025 PF10150 Ribonuclease E/G family DEH84_05030 PF04052 TolB amino-terminal domain DEH84_05030 PF07676 WD40-like Beta Propeller Repeat DEH84_05035 PF00691 OmpA family DEH84_05045 PF00899 ThiF family DEH84_05070 PF00072 Response regulator receiver domain DEH84_05070 PF01627 Hpt domain DEH84_05070 PF00512 His Kinase A (phospho-acceptor) domain DEH84_05070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_05070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_05070 PF00672 HAMP domain DEH84_05080 PF01914 MarC family integral membrane protein DEH84_05095 PF00005 ABC transporter DEH84_05100 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_05105 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEH84_05110 PF00491 Arginase family DEH84_05115 PF02423 Ornithine cyclodeaminase/mu-crystallin family DEH84_05120 PF01037 Lrp/AsnC ligand binding domain DEH84_05150 PF00664 ABC transporter transmembrane region DEH84_05150 PF00005 ABC transporter DEH84_05155 PF02875 Mur ligase family, glutamate ligase domain DEH84_05155 PF08443 RimK-like ATP-grasp domain DEH84_05155 PF08245 Mur ligase middle domain DEH84_05160 PF08245 Mur ligase middle domain DEH84_05160 PF02875 Mur ligase family, glutamate ligase domain DEH84_05160 PF08443 RimK-like ATP-grasp domain DEH84_05165 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_05170 PF00005 ABC transporter DEH84_05170 PF03459 TOBE domain DEH84_05175 PF00440 Bacterial regulatory proteins, tetR family DEH84_05190 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DEH84_05190 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DEH84_05200 PF04185 Phosphoesterase family DEH84_05200 PF05506 Domain of unknown function (DUF756) DEH84_05210 PF07687 Peptidase dimerisation domain DEH84_05210 PF01546 Peptidase family M20/M25/M40 DEH84_05225 PF00005 ABC transporter DEH84_05230 PF01061 ABC-2 type transporter DEH84_05240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DEH84_05245 PF01634 ATP phosphoribosyltransferase DEH84_05250 PF00815 Histidinol dehydrogenase DEH84_05255 PF00155 Aminotransferase class I and II DEH84_05260 PF00475 Imidazoleglycerol-phosphate dehydratase DEH84_05265 PF00117 Glutamine amidotransferase class-I DEH84_05270 PF00977 Histidine biosynthesis protein DEH84_05275 PF00977 Histidine biosynthesis protein DEH84_05295 PF01784 NIF3 (NGG1p interacting factor 3) DEH84_05300 PF13180 PDZ domain DEH84_05300 PF17820 PDZ domain DEH84_05305 PF00902 Sec-independent protein translocase protein (TatC) DEH84_05310 PF02416 mttA/Hcf106 family DEH84_05315 PF02416 mttA/Hcf106 family DEH84_05320 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DEH84_05325 PF01502 Phosphoribosyl-AMP cyclohydrolase DEH84_05330 PF04166 Pyridoxal phosphate biosynthetic protein PdxA DEH84_05340 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal DEH84_05340 PF00355 Rieske [2Fe-2S] domain DEH84_05345 PF00033 Cytochrome b/b6/petB DEH84_05345 PF00032 Cytochrome b(C-terminal)/b6/petD DEH84_05350 PF02167 Cytochrome C1 family DEH84_05355 PF02798 Glutathione S-transferase, N-terminal domain DEH84_05355 PF00043 Glutathione S-transferase, C-terminal domain DEH84_05360 PF04386 Stringent starvation protein B DEH84_05375 PF02321 Outer membrane efflux protein DEH84_05385 PF17922 Tetracyclin repressor-like, C-terminal domain DEH84_05385 PF00440 Bacterial regulatory proteins, tetR family DEH84_05390 PF00850 Histone deacetylase domain DEH84_05395 PF03061 Thioesterase superfamily DEH84_05400 PF00501 AMP-binding enzyme DEH84_05400 PF13193 AMP-binding enzyme C-terminal domain DEH84_05410 PF02653 Branched-chain amino acid transport system / permease component DEH84_05420 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEH84_05420 PF00005 ABC transporter DEH84_05425 PF00005 ABC transporter DEH84_05430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEH84_05435 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEH84_05440 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEH84_05450 PF13404 AsnC-type helix-turn-helix domain DEH84_05450 PF17805 AsnC-like ligand binding domain DEH84_05455 PF17805 AsnC-like ligand binding domain DEH84_05460 PF17805 AsnC-like ligand binding domain DEH84_05465 PF04055 Radical SAM superfamily DEH84_05465 PF13186 Iron-sulfur cluster-binding domain DEH84_05470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEH84_05475 PF00027 Cyclic nucleotide-binding domain DEH84_05475 PF00520 Ion transport protein DEH84_05490 PF07728 AAA domain (dynein-related subfamily) DEH84_05490 PF08406 CbbQ/NirQ/NorQ C-terminal DEH84_05495 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEH84_05500 PF00034 Cytochrome c DEH84_05505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEH84_05505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEH84_05505 PF00378 Enoyl-CoA hydratase/isomerase DEH84_05510 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_05510 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_05510 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_05510 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEH84_05530 PF16884 N-terminal domain of oxidoreductase DEH84_05530 PF00107 Zinc-binding dehydrogenase DEH84_05535 PF00106 short chain dehydrogenase DEH84_05540 PF03668 P-loop ATPase protein family DEH84_05545 PF02463 RecF/RecN/SMC N terminal domain DEH84_05550 PF01513 ATP-NAD kinase DEH84_05555 PF01628 HrcA protein C terminal domain DEH84_05555 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DEH84_05570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_05570 PF02203 Tar ligand binding domain homologue DEH84_05570 PF00672 HAMP domain DEH84_05575 PF08447 PAS fold DEH84_05575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_05580 PF07715 TonB-dependent Receptor Plug Domain DEH84_05580 PF00593 TonB dependent receptor DEH84_05590 PF08448 PAS fold DEH84_05590 PF00990 Diguanylate cyclase, GGDEF domain DEH84_05595 PF02798 Glutathione S-transferase, N-terminal domain DEH84_05595 PF00043 Glutathione S-transferase, C-terminal domain DEH84_05600 PF00043 Glutathione S-transferase, C-terminal domain DEH84_05600 PF02798 Glutathione S-transferase, N-terminal domain DEH84_05605 PF02322 Cytochrome bd terminal oxidase subunit II DEH84_05610 PF01654 Cytochrome bd terminal oxidase subunit I DEH84_05635 PF02543 Carbamoyltransferase N-terminus DEH84_05635 PF16861 Carbamoyltransferase C-terminus DEH84_05640 PF04151 Bacterial pre-peptidase C-terminal domain DEH84_05640 PF00082 Subtilase family DEH84_05650 PF13533 Biotin-lipoyl like DEH84_05655 PF00873 AcrB/AcrD/AcrF family DEH84_05660 PF00873 AcrB/AcrD/AcrF family DEH84_05665 PF01636 Phosphotransferase enzyme family DEH84_05670 PF00563 EAL domain DEH84_05670 PF08668 HDOD domain DEH84_05675 PF00700 Bacterial flagellin C-terminal helical region DEH84_05675 PF00669 Bacterial flagellin N-terminal helical region DEH84_05680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEH84_05680 PF00460 Flagella basal body rod protein DEH84_05685 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DEH84_05685 PF10135 Rod binding protein DEH84_05690 PF02119 Flagellar P-ring protein DEH84_05695 PF02107 Flagellar L-ring protein DEH84_05700 PF00460 Flagella basal body rod protein DEH84_05700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEH84_05705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEH84_05705 PF00460 Flagella basal body rod protein DEH84_05710 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEH84_05710 PF00460 Flagella basal body rod protein DEH84_05710 PF07559 Flagellar basal body protein FlaE DEH84_05715 PF03963 Flagellar hook capping protein - N-terminal region DEH84_05715 PF13861 FlgD Tudor-like domain DEH84_05715 PF13860 FlgD Ig-like domain DEH84_05720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DEH84_05720 PF00460 Flagella basal body rod protein DEH84_05725 PF00460 Flagella basal body rod protein DEH84_05745 PF02272 DHHA1 domain DEH84_05745 PF17768 RecJ OB domain DEH84_05745 PF01368 DHH family DEH84_05755 PF02687 FtsX-like permease family DEH84_05755 PF12704 MacB-like periplasmic core domain DEH84_05770 PF00005 ABC transporter DEH84_05775 PF01026 TatD related DNase DEH84_05795 PF00437 Type II/IV secretion system protein DEH84_05800 PF07730 Histidine kinase DEH84_05800 PF13185 GAF domain DEH84_05800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_05805 PF00196 Bacterial regulatory proteins, luxR family DEH84_05810 PF01975 Survival protein SurE DEH84_05820 PF01551 Peptidase family M23 DEH84_05820 PF01476 LysM domain DEH84_05825 PF05958 tRNA (Uracil-5-)-methyltransferase DEH84_05825 PF01938 TRAM domain DEH84_05835 PF02899 Phage integrase, N-terminal SAM-like domain DEH84_05835 PF00589 Phage integrase family DEH84_05855 PF12679 ABC-2 family transporter protein DEH84_05860 PF00005 ABC transporter DEH84_05865 PF05048 Periplasmic copper-binding protein (NosD) DEH84_05870 PF04205 FMN-binding domain DEH84_05870 PF12801 4Fe-4S binding domain DEH84_05875 PF18793 Nitrous oxide reductase propeller repeat 2 DEH84_05875 PF13473 Cupredoxin-like domain DEH84_05875 PF18764 Nitrous oxide reductase propeller repeat DEH84_05885 PF02424 ApbE family DEH84_05895 PF00970 Oxidoreductase FAD-binding domain DEH84_05895 PF00042 Globin DEH84_05895 PF00175 Oxidoreductase NAD-binding domain DEH84_05900 PF02082 Transcriptional regulator DEH84_05905 PF04305 Protein of unknown function (DUF455) DEH84_05910 PF02673 Bacitracin resistance protein BacA DEH84_05915 PF01641 SelR domain DEH84_05920 PF04279 Intracellular septation protein A DEH84_05925 PF01722 BolA-like protein DEH84_05935 PF02390 Putative methyltransferase DEH84_05945 PF00171 Aldehyde dehydrogenase family DEH84_05950 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEH84_05950 PF01411 tRNA synthetases class II (A) DEH84_05950 PF02272 DHHA1 domain DEH84_05965 PF12833 Helix-turn-helix domain DEH84_05965 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEH84_05970 PF12833 Helix-turn-helix domain DEH84_05970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEH84_05975 PF04127 DNA / pantothenate metabolism flavoprotein DEH84_05975 PF02441 Flavoprotein DEH84_05980 PF00692 dUTPase DEH84_05985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DEH84_05990 PF08007 Cupin superfamily protein DEH84_06005 PF06804 NlpB/DapX lipoprotein DEH84_06010 PF00701 Dihydrodipicolinate synthetase family DEH84_06020 PF02049 Flagellar hook-basal body complex protein FliE DEH84_06025 PF01514 Secretory protein of YscJ/FliF family DEH84_06025 PF08345 Flagellar M-ring protein C-terminal DEH84_06030 PF14842 FliG N-terminal domain DEH84_06030 PF01706 FliG C-terminal domain DEH84_06030 PF14841 FliG middle domain DEH84_06035 PF02108 Flagellar assembly protein FliH DEH84_06040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEH84_06040 PF18269 T3SS EscN ATPase C-terminal domain DEH84_06055 PF03748 Flagellar basal body-associated protein FliL DEH84_06060 PF02154 Flagellar motor switch protein FliM DEH84_06060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEH84_06065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DEH84_06075 PF00813 FliP family DEH84_06080 PF01313 Bacterial export proteins, family 3 DEH84_06085 PF01311 Bacterial export proteins, family 1 DEH84_06095 PF01751 Toprim domain DEH84_06095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_06095 PF00986 DNA gyrase B subunit, carboxyl terminus DEH84_06095 PF00204 DNA gyrase B DEH84_06100 PF02203 Tar ligand binding domain homologue DEH84_06100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_06100 PF00672 HAMP domain DEH84_06110 PF05231 MASE1 DEH84_06110 PF00563 EAL domain DEH84_06115 PF04244 Deoxyribodipyrimidine photo-lyase-related protein DEH84_06120 PF00875 DNA photolyase DEH84_06120 PF03441 FAD binding domain of DNA photolyase DEH84_06130 PF00875 DNA photolyase DEH84_06130 PF03441 FAD binding domain of DNA photolyase DEH84_06135 PF00521 DNA gyrase/topoisomerase IV, subunit A DEH84_06150 PF03793 PASTA domain DEH84_06150 PF00069 Protein kinase domain DEH84_06160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_06160 PF08447 PAS fold DEH84_06180 PF00884 Sulfatase DEH84_06185 PF00072 Response regulator receiver domain DEH84_06185 PF00486 Transcriptional regulatory protein, C terminal DEH84_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_06190 PF08521 Two-component sensor kinase N-terminal DEH84_06190 PF00512 His Kinase A (phospho-acceptor) domain DEH84_06195 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEH84_06200 PF01730 UreF DEH84_06205 PF05194 UreE urease accessory protein, C-terminal domain DEH84_06205 PF02814 UreE urease accessory protein, N-terminal domain DEH84_06210 PF01979 Amidohydrolase family DEH84_06210 PF00449 Urease alpha-subunit, N-terminal domain DEH84_06215 PF00699 Urease beta subunit DEH84_06225 PF00547 Urease, gamma subunit DEH84_06230 PF00072 Response regulator receiver domain DEH84_06230 PF01627 Hpt domain DEH84_06230 PF00512 His Kinase A (phospho-acceptor) domain DEH84_06230 PF00672 HAMP domain DEH84_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_06230 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_06235 PF00072 Response regulator receiver domain DEH84_06240 PF00293 NUDIX domain DEH84_06250 PF02203 Tar ligand binding domain homologue DEH84_06250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_06250 PF00672 HAMP domain DEH84_06260 PF02653 Branched-chain amino acid transport system / permease component DEH84_06265 PF02653 Branched-chain amino acid transport system / permease component DEH84_06270 PF00005 ABC transporter DEH84_06270 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEH84_06275 PF00005 ABC transporter DEH84_06280 PF00072 Response regulator receiver domain DEH84_06280 PF00486 Transcriptional regulatory protein, C terminal DEH84_06285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DEH84_06300 PF00034 Cytochrome c DEH84_06305 PF17862 AAA+ lid domain DEH84_06305 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_06305 PF01434 Peptidase family M41 DEH84_06310 PF08448 PAS fold DEH84_06310 PF00990 Diguanylate cyclase, GGDEF domain DEH84_06320 PF01103 Surface antigen DEH84_06320 PF07244 Surface antigen variable number repeat DEH84_06320 PF17243 POTRA domain TamA domain 1 DEH84_06325 PF04357 TamB, inner membrane protein subunit of TAM complex DEH84_06340 PF00753 Metallo-beta-lactamase superfamily DEH84_06350 PF00916 Sulfate permease family DEH84_06350 PF01740 STAS domain DEH84_06360 PF02583 Metal-sensitive transcriptional repressor DEH84_06380 PF08240 Alcohol dehydrogenase GroES-like domain DEH84_06380 PF13823 Alcohol dehydrogenase GroES-associated DEH84_06380 PF00107 Zinc-binding dehydrogenase DEH84_06385 PF00106 short chain dehydrogenase DEH84_06415 PF00034 Cytochrome c DEH84_06420 PF03860 Domain of Unknown Function (DUF326) DEH84_06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_06445 PF11953 Domain of unknown function (DUF3470) DEH84_06445 PF00037 4Fe-4S binding domain DEH84_06450 PF10414 Sirohaem synthase dimerisation region DEH84_06450 PF14824 Sirohaem biosynthesis protein central DEH84_06450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEH84_06455 PF00009 Elongation factor Tu GTP binding domain DEH84_06460 PF01507 Phosphoadenosine phosphosulfate reductase family DEH84_06465 PF01507 Phosphoadenosine phosphosulfate reductase family DEH84_06480 PF01925 Sulfite exporter TauE/SafE DEH84_06485 PF01734 Patatin-like phospholipase DEH84_06495 PF00403 Heavy-metal-associated domain DEH84_06505 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEH84_06520 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP DEH84_06520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEH84_06525 PF13746 4Fe-4S dicluster domain DEH84_06525 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DEH84_06525 PF12801 4Fe-4S binding domain DEH84_06540 PF00027 Cyclic nucleotide-binding domain DEH84_06540 PF13545 Crp-like helix-turn-helix domain DEH84_06545 PF04055 Radical SAM superfamily DEH84_06545 PF06969 HemN C-terminal domain DEH84_06555 PF00180 Isocitrate/isopropylmalate dehydrogenase DEH84_06560 PF00313 'Cold-shock' DNA-binding domain DEH84_06565 PF02617 ATP-dependent Clp protease adaptor protein ClpS DEH84_06570 PF07724 AAA domain (Cdc48 subfamily) DEH84_06570 PF17871 AAA lid domain DEH84_06570 PF02861 Clp amino terminal domain, pathogenicity island component DEH84_06570 PF10431 C-terminal, D2-small domain, of ClpB protein DEH84_06570 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_06575 PF00149 Calcineurin-like phosphoesterase DEH84_06580 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DEH84_06585 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DEH84_06600 PF01406 tRNA synthetases class I (C) catalytic domain DEH84_06600 PF09190 DALR domain DEH84_06610 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DEH84_06615 PF01171 PP-loop family DEH84_06615 PF09179 TilS substrate binding domain DEH84_06615 PF11734 TilS substrate C-terminal domain DEH84_06620 PF13840 ACT domain DEH84_06620 PF01842 ACT domain DEH84_06620 PF00696 Amino acid kinase family DEH84_06630 PF04381 Putative exonuclease, RdgC DEH84_06635 PF00561 alpha/beta hydrolase fold DEH84_06650 PF02016 LD-carboxypeptidase N-terminal domain DEH84_06650 PF17676 LD-carboxypeptidase C-terminal domain DEH84_06660 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_06665 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_06665 PF12911 N-terminal TM domain of oligopeptide transport permease C DEH84_06670 PF00005 ABC transporter DEH84_06670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DEH84_06685 PF02576 RimP N-terminal domain DEH84_06685 PF17384 RimP C-terminal SH3 domain DEH84_06690 PF08529 NusA N-terminal domain DEH84_06690 PF13184 NusA-like KH domain DEH84_06695 PF11987 Translation-initiation factor 2 DEH84_06695 PF08364 Bacterial translation initiation factor IF-2 associated region DEH84_06695 PF04760 Translation initiation factor IF-2, N-terminal region DEH84_06695 PF00009 Elongation factor Tu GTP binding domain DEH84_06700 PF02033 Ribosome-binding factor A DEH84_06705 PF01509 TruB family pseudouridylate synthase (N terminal domain) DEH84_06705 PF09157 Pseudouridine synthase II TruB, C-terminal DEH84_06705 PF16198 tRNA pseudouridylate synthase B C-terminal domain DEH84_06715 PF00378 Enoyl-CoA hydratase/isomerase DEH84_06720 PF01207 Dihydrouridine synthase (Dus) DEH84_06725 PF01590 GAF domain DEH84_06725 PF00563 EAL domain DEH84_06725 PF00990 Diguanylate cyclase, GGDEF domain DEH84_06725 PF00360 Phytochrome region DEH84_06730 PF00990 Diguanylate cyclase, GGDEF domain DEH84_06730 PF01590 GAF domain DEH84_06730 PF00563 EAL domain DEH84_06730 PF00360 Phytochrome region DEH84_06735 PF01132 Elongation factor P (EF-P) OB domain DEH84_06735 PF08207 Elongation factor P (EF-P) KOW-like domain DEH84_06735 PF09285 Elongation factor P, C-terminal DEH84_06760 PF01066 CDP-alcohol phosphatidyltransferase DEH84_06765 PF00216 Bacterial DNA-binding protein DEH84_06775 PF05698 Bacterial trigger factor protein (TF) C-terminus DEH84_06950 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_06950 PF05362 Lon protease (S16) C-terminal proteolytic domain DEH84_06950 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEH84_07110 PF00182 Chitinase class I DEH84_07140 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEH84_07175 PF01979 Amidohydrolase family DEH84_07180 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_07185 PF00005 ABC transporter DEH84_07200 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_07205 PF00005 ABC transporter DEH84_07215 PF02666 Phosphatidylserine decarboxylase DEH84_07225 PF01479 S4 domain DEH84_07225 PF00849 RNA pseudouridylate synthase DEH84_07235 PF09423 PhoD-like phosphatase DEH84_07235 PF16655 PhoD-like phosphatase, N-terminal domain DEH84_07255 PF01546 Peptidase family M20/M25/M40 DEH84_07255 PF07687 Peptidase dimerisation domain DEH84_07260 PF07687 Peptidase dimerisation domain DEH84_07260 PF01546 Peptidase family M20/M25/M40 DEH84_07270 PF07729 FCD domain DEH84_07270 PF00392 Bacterial regulatory proteins, gntR family DEH84_07275 PF00576 HIUase/Transthyretin family DEH84_07290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_07290 PF17200 Single Cache domain 2 DEH84_07290 PF00672 HAMP domain DEH84_07300 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DEH84_07300 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEH84_07305 PF00111 2Fe-2S iron-sulfur cluster binding domain DEH84_07305 PF01799 [2Fe-2S] binding domain DEH84_07315 PF01979 Amidohydrolase family DEH84_07320 PF00005 ABC transporter DEH84_07335 PF02608 ABC transporter substrate-binding protein PnrA-like DEH84_07345 PF00962 Adenosine/AMP deaminase DEH84_07360 PF01584 CheW-like domain DEH84_07365 PF00672 HAMP domain DEH84_07365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_07365 PF02203 Tar ligand binding domain homologue DEH84_07370 PF01926 50S ribosome-binding GTPase DEH84_07370 PF06071 Protein of unknown function (DUF933) DEH84_07375 PF00512 His Kinase A (phospho-acceptor) domain DEH84_07375 PF01627 Hpt domain DEH84_07375 PF00072 Response regulator receiver domain DEH84_07375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_07380 PF01494 FAD binding domain DEH84_07385 PF10411 Disulfide bond isomerase protein N-terminus DEH84_07385 PF13098 Thioredoxin-like domain DEH84_07405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEH84_07410 PF02545 Maf-like protein DEH84_07415 PF02620 Large ribosomal RNA subunit accumulation protein YceD DEH84_07420 PF01783 Ribosomal L32p protein family DEH84_07425 PF02504 Fatty acid synthesis protein DEH84_07430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEH84_07430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DEH84_07435 PF00698 Acyl transferase domain DEH84_07445 PF00550 Phosphopantetheine attachment site DEH84_07450 PF02801 Beta-ketoacyl synthase, C-terminal domain DEH84_07450 PF00109 Beta-ketoacyl synthase, N-terminal domain DEH84_07455 PF04542 Sigma-70 region 2 DEH84_07455 PF08281 Sigma-70, region 4 DEH84_07465 PF13180 PDZ domain DEH84_07470 PF06421 GTP-binding protein LepA C-terminus DEH84_07470 PF00009 Elongation factor Tu GTP binding domain DEH84_07470 PF00679 Elongation factor G C-terminus DEH84_07470 PF03144 Elongation factor Tu domain 2 DEH84_07475 PF10502 Signal peptidase, peptidase S26 DEH84_07485 PF14622 Ribonuclease-III-like DEH84_07485 PF00035 Double-stranded RNA binding motif DEH84_07490 PF01926 50S ribosome-binding GTPase DEH84_07490 PF07650 KH domain DEH84_07495 PF11967 Recombination protein O N terminal DEH84_07495 PF02565 Recombination protein O C terminal DEH84_07500 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ DEH84_07505 PF01648 4'-phosphopantetheinyl transferase superfamily DEH84_07510 PF00933 Glycosyl hydrolase family 3 N terminal domain DEH84_07520 PF00575 S1 RNA binding domain DEH84_07520 PF10150 Ribonuclease E/G family DEH84_07520 PF12111 Polyribonucleotide phosphorylase C terminal DEH84_07525 PF00849 RNA pseudouridylate synthase DEH84_07525 PF01479 S4 domain DEH84_07540 PF01343 Peptidase family S49 DEH84_07555 PF03309 Type III pantothenate kinase DEH84_07560 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_07560 PF07724 AAA domain (Cdc48 subfamily) DEH84_07565 PF00227 Proteasome subunit DEH84_07575 PF01258 Prokaryotic dksA/traR C4-type zinc finger DEH84_07580 PF07683 Cobalamin synthesis protein cobW C-terminal domain DEH84_07580 PF02492 CobW/HypB/UreG, nucleotide-binding domain DEH84_07585 PF00571 CBS domain DEH84_07585 PF03471 Transporter associated domain DEH84_07590 PF00795 Carbon-nitrogen hydrolase DEH84_07595 PF02091 Glycyl-tRNA synthetase alpha subunit DEH84_07600 PF05746 DALR anticodon binding domain DEH84_07600 PF02092 Glycyl-tRNA synthetase beta subunit DEH84_07620 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) DEH84_07625 PF13525 Outer membrane lipoprotein DEH84_07630 PF01479 S4 domain DEH84_07630 PF00849 RNA pseudouridylate synthase DEH84_07635 PF04079 Segregation and condensation complex subunit ScpB DEH84_07640 PF01479 S4 domain DEH84_07640 PF00849 RNA pseudouridylate synthase DEH84_07645 PF00334 Nucleoside diphosphate kinase DEH84_07650 PF04055 Radical SAM superfamily DEH84_07660 PF13464 Domain of unknown function (DUF4115) DEH84_07665 PF04551 GcpE protein DEH84_07670 PF03129 Anticodon binding domain DEH84_07670 PF13393 Histidyl-tRNA synthetase DEH84_07675 PF09976 Tetratricopeptide repeat-like domain DEH84_07685 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DEH84_07685 PF01926 50S ribosome-binding GTPase DEH84_07690 PF17209 Hfq protein DEH84_07695 PF01926 50S ribosome-binding GTPase DEH84_07695 PF16360 GTP-binding GTPase Middle Region DEH84_07695 PF13167 GTP-binding GTPase N-terminal DEH84_07700 PF01145 SPFH domain / Band 7 family DEH84_07700 PF12221 Bacterial membrane protein N terminal DEH84_07705 PF01145 SPFH domain / Band 7 family DEH84_07715 PF13393 Histidyl-tRNA synthetase DEH84_07720 PF00709 Adenylosuccinate synthetase DEH84_07725 PF00156 Phosphoribosyl transferase domain DEH84_07740 PF17876 Cold shock domain DEH84_07740 PF08206 Ribonuclease B OB domain DEH84_07740 PF00575 S1 RNA binding domain DEH84_07740 PF00773 RNB domain DEH84_07740 PF08461 Ribonuclease R winged-helix domain DEH84_07745 PF00318 Ribosomal protein S2 DEH84_07750 PF00889 Elongation factor TS DEH84_07755 PF00696 Amino acid kinase family DEH84_07760 PF01765 Ribosome recycling factor DEH84_07765 PF01255 Putative undecaprenyl diphosphate synthase DEH84_07775 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DEH84_07775 PF13288 DXP reductoisomerase C-terminal domain DEH84_07775 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DEH84_07780 PF17820 PDZ domain DEH84_07780 PF02163 Peptidase family M50 DEH84_07785 PF07244 Surface antigen variable number repeat DEH84_07785 PF01103 Surface antigen DEH84_07795 PF00132 Bacterial transferase hexapeptide (six repeats) DEH84_07795 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD DEH84_07800 PF07977 FabA-like domain DEH84_07805 PF00132 Bacterial transferase hexapeptide (six repeats) DEH84_07805 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 DEH84_07810 PF02684 Lipid-A-disaccharide synthetase DEH84_07815 PF01351 Ribonuclease HII DEH84_07820 PF08032 RNA 2'-O ribose methyltransferase substrate binding DEH84_07820 PF00588 SpoU rRNA Methylase family DEH84_07830 PF01027 Inhibitor of apoptosis-promoting Bax1 DEH84_07835 PF00772 DnaB-like helicase N terminal domain DEH84_07835 PF03796 DnaB-like helicase C terminal domain DEH84_07840 PF03948 Ribosomal protein L9, C-terminal domain DEH84_07840 PF01281 Ribosomal protein L9, N-terminal domain DEH84_07845 PF01084 Ribosomal protein S18 DEH84_07855 PF01250 Ribosomal protein S6 DEH84_07860 PF00005 ABC transporter DEH84_07860 PF00571 CBS domain DEH84_07865 PF02896 PEP-utilising enzyme, TIM barrel domain DEH84_07865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DEH84_07865 PF00391 PEP-utilising enzyme, mobile domain DEH84_07870 PF03618 Kinase/pyrophosphorylase DEH84_07875 PF00512 His Kinase A (phospho-acceptor) domain DEH84_07875 PF01627 Hpt domain DEH84_07875 PF00672 HAMP domain DEH84_07875 PF00072 Response regulator receiver domain DEH84_07875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_07875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_07880 PF02347 Glycine cleavage system P-protein DEH84_07885 PF01597 Glycine cleavage H-protein DEH84_07890 PF01571 Aminomethyltransferase folate-binding domain DEH84_07890 PF08669 Glycine cleavage T-protein C-terminal barrel domain DEH84_07895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEH84_07900 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DEH84_07905 PF03480 Bacterial extracellular solute-binding protein, family 7 DEH84_07910 PF00512 His Kinase A (phospho-acceptor) domain DEH84_07910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_07910 PF00989 PAS fold DEH84_07915 PF00072 Response regulator receiver domain DEH84_07915 PF00196 Bacterial regulatory proteins, luxR family DEH84_07940 PF04055 Radical SAM superfamily DEH84_07940 PF00919 Uncharacterized protein family UPF0004 DEH84_07940 PF18693 TRAM domain DEH84_07950 PF05025 RbsD / FucU transport protein family DEH84_07955 PF00005 ABC transporter DEH84_07960 PF02653 Branched-chain amino acid transport system / permease component DEH84_07965 PF13407 Periplasmic binding protein domain DEH84_07970 PF00294 pfkB family carbohydrate kinase DEH84_07975 PF01053 Cys/Met metabolism PLP-dependent enzyme DEH84_07980 PF01668 SmpB protein DEH84_07990 PF03658 RnfH family Ubiquitin DEH84_08000 PF00478 IMP dehydrogenase / GMP reductase domain DEH84_08000 PF00571 CBS domain DEH84_08005 PF07690 Major Facilitator Superfamily DEH84_08010 PF00958 GMP synthase C terminal domain DEH84_08010 PF00117 Glutamine amidotransferase class-I DEH84_08010 PF02540 NAD synthase DEH84_08015 PF00589 Phage integrase family DEH84_08015 PF13356 Arm DNA-binding domain DEH84_08035 PF05598 Transposase domain (DUF772) DEH84_08035 PF01609 Transposase DDE domain DEH84_08050 PF01695 IstB-like ATP binding protein DEH84_08055 PF02796 Helix-turn-helix domain of resolvase DEH84_08055 PF00665 Integrase core domain DEH84_08085 PF06986 Type-1V conjugative transfer system mating pair stabilisation DEH84_08090 PF09673 Type-F conjugative transfer system pilin assembly protein DEH84_08095 PF06834 TraU protein DEH84_08130 PF10411 Disulfide bond isomerase protein N-terminus DEH84_08130 PF13098 Thioredoxin-like domain DEH84_08135 PF03743 Bacterial conjugation TrbI-like protein DEH84_08160 PF04972 BON domain DEH84_08160 PF00691 OmpA family DEH84_08175 PF13411 MerR HTH family regulatory protein DEH84_08185 PF05598 Transposase domain (DUF772) DEH84_08185 PF01609 Transposase DDE domain DEH84_08200 PF00460 Flagella basal body rod protein DEH84_08220 PF00486 Transcriptional regulatory protein, C terminal DEH84_08220 PF00072 Response regulator receiver domain DEH84_08235 PF02321 Outer membrane efflux protein DEH84_08240 PF00529 HlyD membrane-fusion protein of T1SS DEH84_08240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_08245 PF00873 AcrB/AcrD/AcrF family DEH84_08260 PF00884 Sulfatase DEH84_08270 PF00072 Response regulator receiver domain DEH84_08270 PF00486 Transcriptional regulatory protein, C terminal DEH84_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_08275 PF00512 His Kinase A (phospho-acceptor) domain DEH84_08275 PF00672 HAMP domain DEH84_08290 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DEH84_08295 PF00376 MerR family regulatory protein DEH84_08295 PF09278 MerR, DNA binding DEH84_08315 PF00816 H-NS histone family DEH84_08385 PF01252 Signal peptidase (SPase) II DEH84_08430 PF07731 Multicopper oxidase DEH84_08430 PF00394 Multicopper oxidase DEH84_08430 PF07732 Multicopper oxidase DEH84_08435 PF05275 Copper resistance protein B precursor (CopB) DEH84_08440 PF04234 CopC domain DEH84_08445 PF05425 Copper resistance protein D DEH84_08450 PF00672 HAMP domain DEH84_08450 PF00512 His Kinase A (phospho-acceptor) domain DEH84_08450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_08455 PF00486 Transcriptional regulatory protein, C terminal DEH84_08455 PF00072 Response regulator receiver domain DEH84_08480 PF00403 Heavy-metal-associated domain DEH84_08495 PF13194 Domain of unknown function (DUF4010) DEH84_08510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_08510 PF00529 HlyD membrane-fusion protein of T1SS DEH84_08515 PF00873 AcrB/AcrD/AcrF family DEH84_08520 PF03449 Transcription elongation factor, N-terminal DEH84_08520 PF01272 Transcription elongation factor, GreA/GreB, C-term DEH84_08525 PF00199 Catalase DEH84_08525 PF06628 Catalase-related immune-responsive DEH84_08525 PF18011 C-terminal domain found in long catalases DEH84_08530 PF02321 Outer membrane efflux protein DEH84_08555 PF00512 His Kinase A (phospho-acceptor) domain DEH84_08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_08560 PF00512 His Kinase A (phospho-acceptor) domain DEH84_08560 PF00989 PAS fold DEH84_08560 PF16736 Single Cache-like DEH84_08560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_08575 PF03814 Potassium-transporting ATPase A subunit DEH84_08585 PF02669 K+-transporting ATPase, c chain DEH84_08590 PF01544 CorA-like Mg2+ transporter protein DEH84_08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_08595 PF02702 Osmosensitive K+ channel His kinase sensor domain DEH84_08595 PF00512 His Kinase A (phospho-acceptor) domain DEH84_08595 PF13492 GAF domain DEH84_08595 PF13493 Domain of unknown function (DUF4118) DEH84_08600 PF00072 Response regulator receiver domain DEH84_08600 PF00486 Transcriptional regulatory protein, C terminal DEH84_08605 PF00005 ABC transporter DEH84_08615 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_08620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEH84_08620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEH84_08625 PF03466 LysR substrate binding domain DEH84_08625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_08640 PF04002 RadC-like JAB domain DEH84_08675 PF13676 TIR domain DEH84_08705 PF02195 ParB-like nuclease domain DEH84_08705 PF17762 HTH domain found in ParB protein DEH84_08725 PF00069 Protein kinase domain DEH84_08755 PF03918 Cytochrome C biogenesis protein DEH84_08760 PF08534 Redoxin DEH84_08765 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DEH84_08765 PF01578 Cytochrome C assembly protein DEH84_08770 PF03100 CcmE DEH84_08780 PF01578 Cytochrome C assembly protein DEH84_08785 PF03379 CcmB protein DEH84_08790 PF00005 ABC transporter DEH84_08795 PF03264 NapC/NirT cytochrome c family, N-terminal region DEH84_08800 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) DEH84_08805 PF00384 Molybdopterin oxidoreductase DEH84_08805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEH84_08805 PF01568 Molydopterin dinucleotide binding domain DEH84_08810 PF03927 NapD protein DEH84_08815 PF06796 Periplasmic nitrate reductase protein NapE DEH84_08825 PF14437 MafB19-like deaminase DEH84_08855 PF01144 Coenzyme A transferase DEH84_08860 PF01144 Coenzyme A transferase DEH84_08865 PF02646 RmuC family DEH84_08870 PF00762 Ferrochelatase DEH84_08875 PF00072 Response regulator receiver domain DEH84_08880 PF00211 Adenylate and Guanylate cyclase catalytic domain DEH84_08880 PF16701 Adenylate cyclase regulatory domain DEH84_08885 PF04539 Sigma-70 region 3 DEH84_08885 PF04542 Sigma-70 region 2 DEH84_08885 PF04545 Sigma-70, region 4 DEH84_08885 PF00140 Sigma-70 factor, region 1.2 DEH84_08885 PF04546 Sigma-70, non-essential region DEH84_08885 PF03979 Sigma-70 factor, region 1.1 DEH84_08890 PF08278 DNA primase DnaG DnaB-binding DEH84_08890 PF01807 CHC2 zinc finger DEH84_08890 PF10410 DnaB-helicase binding domain of primase DEH84_08890 PF08275 DNA primase catalytic core, N-terminal domain DEH84_08895 PF05191 Adenylate kinase, active site lid DEH84_08900 PF02348 Cytidylyltransferase DEH84_08905 PF03966 Trm112p-like protein DEH84_08910 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DEH84_08915 PF02472 Biopolymer transport protein ExbD/TolR DEH84_08920 PF01618 MotA/TolQ/ExbB proton channel family DEH84_08925 PF13742 OB-fold nucleic acid binding domain DEH84_08925 PF02601 Exonuclease VII, large subunit DEH84_08930 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DEH84_08930 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DEH84_08935 PF00676 Dehydrogenase E1 component DEH84_08935 PF16078 2-oxoglutarate dehydrogenase N-terminus DEH84_08935 PF16870 2-oxoglutarate dehydrogenase C-terminal DEH84_08935 PF02779 Transketolase, pyrimidine binding domain DEH84_08940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DEH84_08940 PF00364 Biotin-requiring enzyme DEH84_08940 PF02817 e3 binding domain DEH84_08945 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_08945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEH84_08950 PF03969 AFG1-like ATPase DEH84_08970 PF00557 Metallopeptidase family M24 DEH84_08975 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DEH84_08975 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal DEH84_08975 PF02769 AIR synthase related protein, C-terminal domain DEH84_08990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DEH84_08990 PF14572 Phosphoribosyl synthetase-associated domain DEH84_08995 PF00591 Glycosyl transferase family, a/b domain DEH84_08995 PF02885 Glycosyl transferase family, helical bundle domain DEH84_08995 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DEH84_09010 PF00072 Response regulator receiver domain DEH84_09010 PF00196 Bacterial regulatory proteins, luxR family DEH84_09015 PF05231 MASE1 DEH84_09015 PF07730 Histidine kinase DEH84_09015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_09020 PF01136 Peptidase family U32 DEH84_09020 PF12392 Collagenase DEH84_09030 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DEH84_09040 PF01432 Peptidase family M3 DEH84_09045 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DEH84_09045 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DEH84_09050 PF00196 Bacterial regulatory proteins, luxR family DEH84_09050 PF00072 Response regulator receiver domain DEH84_09055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_09055 PF00989 PAS fold DEH84_09055 PF00512 His Kinase A (phospho-acceptor) domain DEH84_09060 PF17831 Pyruvate dehydrogenase E1 component middle domain DEH84_09060 PF00456 Transketolase, thiamine diphosphate binding domain DEH84_09065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DEH84_09065 PF02817 e3 binding domain DEH84_09065 PF00364 Biotin-requiring enzyme DEH84_09070 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_09070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DEH84_09085 PF00403 Heavy-metal-associated domain DEH84_09090 PF13411 MerR HTH family regulatory protein DEH84_09095 PF07733 Bacterial DNA polymerase III alpha NTPase domain DEH84_09095 PF01336 OB-fold nucleic acid binding domain DEH84_09095 PF02811 PHP domain DEH84_09095 PF14579 Helix-hairpin-helix motif DEH84_09095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DEH84_09110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DEH84_09110 PF00925 GTP cyclohydrolase II DEH84_09115 PF16916 Dimerisation domain of Zinc Transporter DEH84_09115 PF01545 Cation efflux family DEH84_09120 PF00990 Diguanylate cyclase, GGDEF domain DEH84_09120 PF01590 GAF domain DEH84_09120 PF00563 EAL domain DEH84_09120 PF00360 Phytochrome region DEH84_09125 PF00563 EAL domain DEH84_09125 PF01590 GAF domain DEH84_09125 PF00990 Diguanylate cyclase, GGDEF domain DEH84_09125 PF00360 Phytochrome region DEH84_09130 PF07943 Penicillin-binding protein 5, C-terminal domain DEH84_09130 PF00768 D-alanyl-D-alanine carboxypeptidase DEH84_09140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEH84_09140 PF00128 Alpha amylase, catalytic domain DEH84_09140 PF11941 Domain of unknown function (DUF3459) DEH84_09155 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEH84_09155 PF00128 Alpha amylase, catalytic domain DEH84_09155 PF02806 Alpha amylase, C-terminal all-beta domain DEH84_09160 PF11896 Domain of unknown function (DUF3416) DEH84_09165 PF16657 Maltogenic Amylase, C-terminal domain DEH84_09165 PF00128 Alpha amylase, catalytic domain DEH84_09175 PF00128 Alpha amylase, catalytic domain DEH84_09175 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEH84_09180 PF00128 Alpha amylase, catalytic domain DEH84_09180 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEH84_09180 PF11941 Domain of unknown function (DUF3459) DEH84_09185 PF02446 4-alpha-glucanotransferase DEH84_09190 PF02405 Permease MlaE DEH84_09195 PF00005 ABC transporter DEH84_09200 PF02470 MlaD protein DEH84_09220 PF00571 CBS domain DEH84_09230 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEH84_09235 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_09240 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_09245 PF00563 EAL domain DEH84_09245 PF03707 Bacterial signalling protein N terminal repeat DEH84_09245 PF00990 Diguanylate cyclase, GGDEF domain DEH84_09255 PF01026 TatD related DNase DEH84_09265 PF09115 DNA polymerase III, delta subunit, C terminal DEH84_09270 PF02223 Thymidylate kinase DEH84_09275 PF02618 YceG-like family DEH84_09280 PF01571 Aminomethyltransferase folate-binding domain DEH84_09300 PF00501 AMP-binding enzyme DEH84_09300 PF13193 AMP-binding enzyme C-terminal domain DEH84_09305 PF00108 Thiolase, N-terminal domain DEH84_09305 PF02803 Thiolase, C-terminal domain DEH84_09325 PF00465 Iron-containing alcohol dehydrogenase DEH84_09330 PF01595 Cyclin M transmembrane N-terminal domain DEH84_09330 PF00571 CBS domain DEH84_09330 PF03471 Transporter associated domain DEH84_09340 PF17674 HHH domain DEH84_09340 PF16921 Tex protein YqgF-like domain DEH84_09340 PF09371 Tex-like protein N-terminal domain DEH84_09340 PF00575 S1 RNA binding domain DEH84_09345 PF01180 Dihydroorotate dehydrogenase DEH84_09350 PF00069 Protein kinase domain DEH84_09355 PF00085 Thioredoxin DEH84_09360 PF07497 Rho termination factor, RNA-binding domain DEH84_09360 PF07498 Rho termination factor, N-terminal domain DEH84_09360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEH84_09365 PF01197 Ribosomal protein L31 DEH84_09375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_09375 PF00989 PAS fold DEH84_09375 PF00512 His Kinase A (phospho-acceptor) domain DEH84_09375 PF11808 Phosphate regulon sensor protein PhoR DEH84_09380 PF00486 Transcriptional regulatory protein, C terminal DEH84_09380 PF00072 Response regulator receiver domain DEH84_09385 PF01895 PhoU domain DEH84_09390 PF00005 ABC transporter DEH84_09395 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_09400 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_09405 PF12849 PBP superfamily domain DEH84_09415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DEH84_09415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DEH84_09415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DEH84_09415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DEH84_09420 PF00809 Pterin binding enzyme DEH84_09425 PF06480 FtsH Extracellular DEH84_09425 PF01434 Peptidase family M41 DEH84_09425 PF17862 AAA+ lid domain DEH84_09425 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_09430 PF01728 FtsJ-like methyltransferase DEH84_09435 PF01985 CRS1 / YhbY (CRM) domain DEH84_09445 PF01272 Transcription elongation factor, GreA/GreB, C-term DEH84_09445 PF03449 Transcription elongation factor, N-terminal DEH84_09450 PF02142 MGS-like domain DEH84_09450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DEH84_09450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEH84_09455 PF00117 Glutamine amidotransferase class-I DEH84_09455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DEH84_09460 PF00210 Ferritin-like domain DEH84_09475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DEH84_09475 PF01842 ACT domain DEH84_09475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DEH84_09480 PF07690 Major Facilitator Superfamily DEH84_09490 PF00588 SpoU rRNA Methylase family DEH84_09490 PF08032 RNA 2'-O ribose methyltransferase substrate binding DEH84_09495 PF00005 ABC transporter DEH84_09500 PF13472 GDSL-like Lipase/Acylhydrolase family DEH84_09505 PF05233 PHB accumulation regulatory domain DEH84_09505 PF07879 PHB/PHA accumulation regulator DNA-binding domain DEH84_09520 PF04607 Region found in RelA / SpoT proteins DEH84_09520 PF02824 TGS domain DEH84_09520 PF13291 ACT domain DEH84_09530 PF00106 short chain dehydrogenase DEH84_09535 PF01266 FAD dependent oxidoreductase DEH84_09535 PF05430 S-adenosyl-L-methionine-dependent methyltransferase DEH84_09540 PF01479 S4 domain DEH84_09545 PF01025 GrpE DEH84_09550 PF00012 Hsp70 protein DEH84_09555 PF01556 DnaJ C terminal domain DEH84_09555 PF00226 DnaJ domain DEH84_09555 PF00684 DnaJ central domain DEH84_09570 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DEH84_09570 PF01276 Orn/Lys/Arg decarboxylase, major domain DEH84_09570 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain DEH84_09580 PF01145 SPFH domain / Band 7 family DEH84_09590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DEH84_09590 PF03120 NAD-dependent DNA ligase OB-fold domain DEH84_09590 PF01653 NAD-dependent DNA ligase adenylation domain DEH84_09590 PF12826 Helix-hairpin-helix motif DEH84_09590 PF00533 BRCA1 C Terminus (BRCT) domain DEH84_09600 PF06470 SMC proteins Flexible Hinge Domain DEH84_09600 PF02463 RecF/RecN/SMC N terminal domain DEH84_09605 PF14489 QueF-like protein DEH84_09615 PF08448 PAS fold DEH84_09615 PF00990 Diguanylate cyclase, GGDEF domain DEH84_09620 PF00072 Response regulator receiver domain DEH84_09620 PF00990 Diguanylate cyclase, GGDEF domain DEH84_09625 PF00155 Aminotransferase class I and II DEH84_09630 PF00132 Bacterial transferase hexapeptide (six repeats) DEH84_09630 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal DEH84_09630 PF14602 Hexapeptide repeat of succinyl-transferase DEH84_09635 PF00437 Type II/IV secretion system protein DEH84_09640 PF01546 Peptidase family M20/M25/M40 DEH84_09640 PF07687 Peptidase dimerisation domain DEH84_09645 PF05175 Methyltransferase small domain DEH84_09660 PF01047 MarR family DEH84_09665 PF02566 OsmC-like protein DEH84_09670 PF00877 NlpC/P60 family DEH84_09675 PF06463 Molybdenum Cofactor Synthesis C DEH84_09675 PF04055 Radical SAM superfamily DEH84_09680 PF12804 MobA-like NTP transferase domain DEH84_09695 PF01209 ubiE/COQ5 methyltransferase family DEH84_09700 PF16123 Hydroxyacylglutathione hydrolase C-terminus DEH84_09700 PF00753 Metallo-beta-lactamase superfamily DEH84_09705 PF01476 LysM domain DEH84_09705 PF01464 Transglycosylase SLT domain DEH84_09710 PF13662 Toprim domain DEH84_09710 PF02132 RecR protein DEH84_09715 PF02575 YbaB/EbfC DNA-binding family DEH84_09720 PF12170 DNA polymerase III tau subunit V interacting with alpha DEH84_09720 PF12169 DNA polymerase III subunits gamma and tau domain III DEH84_09720 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding DEH84_09725 PF00270 DEAD/DEAH box helicase DEH84_09725 PF00271 Helicase conserved C-terminal domain DEH84_09735 PF03883 Peroxide stress protein YaaA DEH84_09740 PF00132 Bacterial transferase hexapeptide (six repeats) DEH84_09745 PF01430 Hsp33 protein DEH84_09750 PF00849 RNA pseudouridylate synthase DEH84_09765 PF04977 Septum formation initiator DEH84_09770 PF03952 Enolase, N-terminal domain DEH84_09770 PF00113 Enolase, C-terminal TIM barrel domain DEH84_09775 PF00793 DAHP synthetase I family DEH84_09780 PF00117 Glutamine amidotransferase class-I DEH84_09780 PF06418 CTP synthase N-terminus DEH84_09785 PF01553 Acyltransferase DEH84_09795 PF05190 MutS family domain IV DEH84_09795 PF00488 MutS domain V DEH84_09795 PF01624 MutS domain I DEH84_09795 PF05192 MutS domain III DEH84_09795 PF05188 MutS domain II DEH84_09800 PF00459 Inositol monophosphatase family DEH84_09805 PF00588 SpoU rRNA Methylase family DEH84_09810 PF00132 Bacterial transferase hexapeptide (six repeats) DEH84_09825 PF03466 LysR substrate binding domain DEH84_09825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_09835 PF00994 Probable molybdopterin binding domain DEH84_09840 PF04751 Protein of unknown function (DUF615) DEH84_09845 PF01523 Putative modulator of DNA gyrase DEH84_09850 PF03480 Bacterial extracellular solute-binding protein, family 7 DEH84_09865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEH84_09880 PF09424 Yqey-like protein DEH84_09885 PF01165 Ribosomal protein S21 DEH84_09890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DEH84_09895 PF01743 Poly A polymerase head domain DEH84_09895 PF12626 Polymerase A arginine-rich C-terminus DEH84_09895 PF12627 Probable RNA and SrmB- binding site of polymerase A DEH84_09905 PF08299 Bacterial dnaA protein helix-turn-helix DEH84_09905 PF00308 Bacterial dnaA protein DEH84_09910 PF01594 AI-2E family transporter DEH84_09920 PF02660 Glycerol-3-phosphate acyltransferase DEH84_09930 PF01300 Telomere recombination DEH84_09935 PF02811 PHP domain DEH84_09945 PF00692 dUTPase DEH84_09950 PF04324 BFD-like [2Fe-2S] binding domain DEH84_09950 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DEH84_09950 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DEH84_09950 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_09950 PF18267 Rubredoxin NAD+ reductase C-terminal domain DEH84_09955 PF01568 Molydopterin dinucleotide binding domain DEH84_09955 PF00384 Molybdopterin oxidoreductase DEH84_09955 PF04324 BFD-like [2Fe-2S] binding domain DEH84_09955 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEH84_09960 PF02885 Glycosyl transferase family, helical bundle domain DEH84_09965 PF00892 EamA-like transporter family DEH84_09975 PF00248 Aldo/keto reductase family DEH84_09980 PF04262 Glutamate-cysteine ligase DEH84_09985 PF00155 Aminotransferase class I and II DEH84_09990 PF01062 Bestrophin, RFP-TM, chloride channel DEH84_09995 PF03707 Bacterial signalling protein N terminal repeat DEH84_09995 PF00990 Diguanylate cyclase, GGDEF domain DEH84_09995 PF00563 EAL domain DEH84_10005 PF00563 EAL domain DEH84_10005 PF08448 PAS fold DEH84_10005 PF08447 PAS fold DEH84_10005 PF00990 Diguanylate cyclase, GGDEF domain DEH84_10010 PF00072 Response regulator receiver domain DEH84_10010 PF00196 Bacterial regulatory proteins, luxR family DEH84_10015 PF00672 HAMP domain DEH84_10015 PF16448 LapD/MoxY periplasmic domain DEH84_10015 PF07730 Histidine kinase DEH84_10020 PF01042 Endoribonuclease L-PSP DEH84_10030 PF00440 Bacterial regulatory proteins, tetR family DEH84_10030 PF16925 Tetracyclin repressor-like, C-terminal domain DEH84_10035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DEH84_10045 PF04337 Protein of unknown function, DUF480 DEH84_10070 PF01774 UreD urease accessory protein DEH84_10075 PF00196 Bacterial regulatory proteins, luxR family DEH84_10075 PF00072 Response regulator receiver domain DEH84_10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10080 PF00512 His Kinase A (phospho-acceptor) domain DEH84_10080 PF09456 RcsC Alpha-Beta-Loop (ABL) DEH84_10080 PF00072 Response regulator receiver domain DEH84_10090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_10090 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_10090 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEH84_10090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_10095 PF01012 Electron transfer flavoprotein domain DEH84_10095 PF00766 Electron transfer flavoprotein FAD-binding domain DEH84_10100 PF01012 Electron transfer flavoprotein domain DEH84_10105 PF01177 Asp/Glu/Hydantoin racemase DEH84_10110 PF06594 Haemolysin-type calcium binding protein related domain DEH84_10110 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) DEH84_10125 PF17843 MycE methyltransferase N-terminal DEH84_10145 PF13533 Biotin-lipoyl like DEH84_10150 PF00664 ABC transporter transmembrane region DEH84_10150 PF00005 ABC transporter DEH84_10150 PF03412 Peptidase C39 family DEH84_10180 PF05362 Lon protease (S16) C-terminal proteolytic domain DEH84_10180 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_10180 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEH84_10185 PF07724 AAA domain (Cdc48 subfamily) DEH84_10185 PF10431 C-terminal, D2-small domain, of ClpB protein DEH84_10185 PF06689 ClpX C4-type zinc finger DEH84_10190 PF00574 Clp protease DEH84_10195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DEH84_10195 PF05697 Bacterial trigger factor protein (TF) DEH84_10195 PF05698 Bacterial trigger factor protein (TF) C-terminus DEH84_10205 PF00873 AcrB/AcrD/AcrF family DEH84_10225 PF01614 Bacterial transcriptional regulator DEH84_10225 PF09339 IclR helix-turn-helix domain DEH84_10230 PF00768 D-alanyl-D-alanine carboxypeptidase DEH84_10235 PF00682 HMGL-like DEH84_10235 PF08502 LeuA allosteric (dimerisation) domain DEH84_10240 PF01066 CDP-alcohol phosphatidyltransferase DEH84_10245 PF12794 Mechanosensitive ion channel inner membrane domain 1 DEH84_10245 PF12795 Mechanosensitive ion channel porin domain DEH84_10245 PF00924 Mechanosensitive ion channel DEH84_10250 PF00850 Histone deacetylase domain DEH84_10255 PF17863 AAA lid domain DEH84_10255 PF07726 ATPase family associated with various cellular activities (AAA) DEH84_10265 PF01841 Transglutaminase-like superfamily DEH84_10265 PF13559 Domain of unknown function (DUF4129) DEH84_10265 PF11992 Domain of unknown function (DUF3488) DEH84_10270 PF13406 Transglycosylase SLT domain DEH84_10275 PF00816 H-NS histone family DEH84_10280 PF05193 Peptidase M16 inactive domain DEH84_10280 PF00675 Insulinase (Peptidase family M16) DEH84_10285 PF13533 Biotin-lipoyl like DEH84_10290 PF00005 ABC transporter DEH84_10300 PF06480 FtsH Extracellular DEH84_10300 PF17862 AAA+ lid domain DEH84_10300 PF01434 Peptidase family M41 DEH84_10300 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_10315 PF02954 Bacterial regulatory protein, Fis family DEH84_10315 PF00158 Sigma-54 interaction domain DEH84_10315 PF00072 Response regulator receiver domain DEH84_10320 PF00512 His Kinase A (phospho-acceptor) domain DEH84_10320 PF00989 PAS fold DEH84_10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10335 PF18146 Damage-inducible protein CinA KH domain DEH84_10335 PF00994 Probable molybdopterin binding domain DEH84_10335 PF02464 Competence-damaged protein DEH84_10360 PF00072 Response regulator receiver domain DEH84_10360 PF00990 Diguanylate cyclase, GGDEF domain DEH84_10370 PF01209 ubiE/COQ5 methyltransferase family DEH84_10395 PF00216 Bacterial DNA-binding protein DEH84_10400 PF01588 Putative tRNA binding domain DEH84_10400 PF03147 Ferredoxin-fold anticodon binding domain DEH84_10400 PF03483 B3/4 domain DEH84_10400 PF03484 tRNA synthetase B5 domain DEH84_10400 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DEH84_10405 PF00107 Zinc-binding dehydrogenase DEH84_10405 PF08240 Alcohol dehydrogenase GroES-like domain DEH84_10410 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DEH84_10410 PF01409 tRNA synthetases class II core domain (F) DEH84_10415 PF00453 Ribosomal protein L20 DEH84_10420 PF01632 Ribosomal protein L35 DEH84_10425 PF00707 Translation initiation factor IF-3, C-terminal domain DEH84_10425 PF05198 Translation initiation factor IF-3, N-terminal domain DEH84_10430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DEH84_10430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEH84_10430 PF02824 TGS domain DEH84_10430 PF03129 Anticodon binding domain DEH84_10435 PF00463 Isocitrate lyase family DEH84_10440 PF00202 Aminotransferase class-III DEH84_10445 PF00719 Inorganic pyrophosphatase DEH84_10455 PF03588 Leucyl/phenylalanyl-tRNA protein transferase DEH84_10460 PF04376 Arginine-tRNA-protein transferase, N terminus DEH84_10460 PF04377 Arginine-tRNA-protein transferase, C terminus DEH84_10470 PF00486 Transcriptional regulatory protein, C terminal DEH84_10470 PF00072 Response regulator receiver domain DEH84_10475 PF00512 His Kinase A (phospho-acceptor) domain DEH84_10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10475 PF00672 HAMP domain DEH84_10480 PF02542 YgbB family DEH84_10480 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DEH84_10485 PF00909 Ammonium Transporter Family DEH84_10490 PF02542 YgbB family DEH84_10490 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DEH84_10495 PF00270 DEAD/DEAH box helicase DEH84_10495 PF02559 CarD-like/TRCF domain DEH84_10495 PF00271 Helicase conserved C-terminal domain DEH84_10495 PF03461 TRCF domain DEH84_10495 PF17757 UvrB interaction domain DEH84_10520 PF00486 Transcriptional regulatory protein, C terminal DEH84_10520 PF00072 Response regulator receiver domain DEH84_10530 PF00873 AcrB/AcrD/AcrF family DEH84_10540 PF03737 Aldolase/RraA DEH84_10550 PF00535 Glycosyl transferase family 2 DEH84_10560 PF01569 PAP2 superfamily DEH84_10565 PF02445 Quinolinate synthetase A protein DEH84_10570 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DEH84_10570 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DEH84_10580 PF02910 Fumarate reductase flavoprotein C-term DEH84_10580 PF00890 FAD binding domain DEH84_10590 PF04228 Putative neutral zinc metallopeptidase DEH84_10595 PF08659 KR domain DEH84_10595 PF00550 Phosphopantetheine attachment site DEH84_10595 PF00109 Beta-ketoacyl synthase, N-terminal domain DEH84_10595 PF16197 Ketoacyl-synthetase C-terminal extension DEH84_10595 PF00107 Zinc-binding dehydrogenase DEH84_10595 PF08240 Alcohol dehydrogenase GroES-like domain DEH84_10595 PF14765 Polyketide synthase dehydratase DEH84_10595 PF00698 Acyl transferase domain DEH84_10595 PF02801 Beta-ketoacyl synthase, C-terminal domain DEH84_10600 PF08331 Domain of unknown function (DUF1730) DEH84_10605 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DEH84_10610 PF11741 AMIN domain DEH84_10610 PF01520 N-acetylmuramoyl-L-alanine amidase DEH84_10615 PF09335 SNARE associated Golgi protein DEH84_10620 PF01119 DNA mismatch repair protein, C-terminal domain DEH84_10620 PF08676 MutL C terminal dimerisation domain DEH84_10625 PF01479 S4 domain DEH84_10625 PF00849 RNA pseudouridylate synthase DEH84_10630 PF07690 Major Facilitator Superfamily DEH84_10645 PF07690 Major Facilitator Superfamily DEH84_10650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_10650 PF00529 HlyD membrane-fusion protein of T1SS DEH84_10655 PF02321 Outer membrane efflux protein DEH84_10660 PF01047 MarR family DEH84_10665 PF00005 ABC transporter DEH84_10665 PF00664 ABC transporter transmembrane region DEH84_10670 PF00691 OmpA family DEH84_10675 PF00303 Thymidylate synthase DEH84_10680 PF00186 Dihydrofolate reductase DEH84_10690 PF00072 Response regulator receiver domain DEH84_10690 PF09308 LuxQ, periplasmic DEH84_10690 PF00512 His Kinase A (phospho-acceptor) domain DEH84_10690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEH84_10705 PF08501 Shikimate dehydrogenase substrate binding domain DEH84_10705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DEH84_10710 PF17938 Tetracyclin repressor-like, C-terminal domain DEH84_10710 PF00440 Bacterial regulatory proteins, tetR family DEH84_10715 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DEH84_10720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DEH84_10725 PF03480 Bacterial extracellular solute-binding protein, family 7 DEH84_10730 PF01220 Dehydroquinase class II DEH84_10735 PF13609 Gram-negative porin DEH84_10740 PF00206 Lyase DEH84_10740 PF10397 Adenylosuccinate lyase C-terminus DEH84_10745 PF02627 Carboxymuconolactone decarboxylase family DEH84_10750 PF00775 Dioxygenase DEH84_10755 PF00775 Dioxygenase DEH84_10755 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal DEH84_10760 PF03466 LysR substrate binding domain DEH84_10760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_10765 PF01614 Bacterial transcriptional regulator DEH84_10765 PF09339 IclR helix-turn-helix domain DEH84_10770 PF01144 Coenzyme A transferase DEH84_10775 PF01144 Coenzyme A transferase DEH84_10780 PF00108 Thiolase, N-terminal domain DEH84_10780 PF02803 Thiolase, C-terminal domain DEH84_10790 PF00730 HhH-GPD superfamily base excision DNA repair protein DEH84_10790 PF14815 NUDIX domain DEH84_10790 PF00633 Helix-hairpin-helix motif DEH84_10800 PF06827 Zinc finger found in FPG and IleRS DEH84_10800 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DEH84_10800 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DEH84_10815 PF00288 GHMP kinases N terminal domain DEH84_10825 PF14572 Phosphoribosyl synthetase-associated domain DEH84_10825 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DEH84_10830 PF14693 Ribosomal protein TL5, C-terminal domain DEH84_10830 PF01386 Ribosomal L25p family DEH84_10835 PF01195 Peptidyl-tRNA hydrolase DEH84_10845 PF00037 4Fe-4S binding domain DEH84_10850 PF01467 Cytidylyltransferase-like DEH84_10860 PF00448 SRP54-type protein, GTPase domain DEH84_10860 PF02881 SRP54-type protein, helical bundle domain DEH84_10870 PF02978 Signal peptide binding domain DEH84_10870 PF02881 SRP54-type protein, helical bundle domain DEH84_10870 PF00448 SRP54-type protein, GTPase domain DEH84_10885 PF00512 His Kinase A (phospho-acceptor) domain DEH84_10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10890 PF00158 Sigma-54 interaction domain DEH84_10890 PF00072 Response regulator receiver domain DEH84_10890 PF02954 Bacterial regulatory protein, Fis family DEH84_10895 PF01510 N-acetylmuramoyl-L-alanine amidase DEH84_10900 PF02867 Ribonucleotide reductase, barrel domain DEH84_10900 PF03477 ATP cone domain DEH84_10900 PF00317 Ribonucleotide reductase, all-alpha domain DEH84_10905 PF00268 Ribonucleotide reductase, small chain DEH84_10915 PF13188 PAS domain DEH84_10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10915 PF00989 PAS fold DEH84_10915 PF00512 His Kinase A (phospho-acceptor) domain DEH84_10920 PF00072 Response regulator receiver domain DEH84_10930 PF00005 ABC transporter DEH84_10930 PF12848 ABC transporter DEH84_10955 PF04851 Type III restriction enzyme, res subunit DEH84_10955 PF13307 Helicase C-terminal domain DEH84_10960 PF02569 Pantoate-beta-alanine ligase DEH84_10965 PF02548 Ketopantoate hydroxymethyltransferase DEH84_10970 PF02616 Segregation and condensation protein ScpA DEH84_10985 PF01588 Putative tRNA binding domain DEH84_10985 PF09334 tRNA synthetases class I (M) DEH84_10990 PF10609 NUBPL iron-transfer P-loop NTPase DEH84_10995 PF07568 Histidine kinase DEH84_10995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_10995 PF12282 Signal transduction histidine kinase DEH84_11000 PF00072 Response regulator receiver domain DEH84_11005 PF00360 Phytochrome region DEH84_11005 PF00512 His Kinase A (phospho-acceptor) domain DEH84_11005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_11005 PF01590 GAF domain DEH84_11005 PF08446 PAS fold DEH84_11010 PF01627 Hpt domain DEH84_11010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_11010 PF00072 Response regulator receiver domain DEH84_11010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_11010 PF00672 HAMP domain DEH84_11010 PF00512 His Kinase A (phospho-acceptor) domain DEH84_11015 PF03707 Bacterial signalling protein N terminal repeat DEH84_11015 PF00563 EAL domain DEH84_11015 PF00990 Diguanylate cyclase, GGDEF domain DEH84_11020 PF00990 Diguanylate cyclase, GGDEF domain DEH84_11020 PF00072 Response regulator receiver domain DEH84_11025 PF03853 YjeF-related protein N-terminus DEH84_11025 PF01256 Carbohydrate kinase DEH84_11040 PF00149 Calcineurin-like phosphoesterase DEH84_11045 PF01595 Cyclin M transmembrane N-terminal domain DEH84_11045 PF00571 CBS domain DEH84_11045 PF03471 Transporter associated domain DEH84_11050 PF08402 TOBE domain DEH84_11050 PF00005 ABC transporter DEH84_11055 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_11075 PF00072 Response regulator receiver domain DEH84_11075 PF00486 Transcriptional regulatory protein, C terminal DEH84_11080 PF03772 Competence protein DEH84_11080 PF00753 Metallo-beta-lactamase superfamily DEH84_11090 PF02600 Disulfide bond formation protein DsbB DEH84_11095 PF00425 chorismate binding enzyme DEH84_11095 PF04715 Anthranilate synthase component I, N terminal region DEH84_11100 PF02469 Fasciclin domain DEH84_11105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEH84_11110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_11110 PF00672 HAMP domain DEH84_11110 PF02203 Tar ligand binding domain homologue DEH84_11115 PF01264 Chorismate synthase DEH84_11125 PF03631 Virulence factor BrkB DEH84_11135 PF02913 FAD linked oxidases, C-terminal domain DEH84_11135 PF01565 FAD binding domain DEH84_11155 PF00293 NUDIX domain DEH84_11165 PF00361 Proton-conducting membrane transporter DEH84_11170 PF00361 Proton-conducting membrane transporter DEH84_11170 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus DEH84_11175 PF00361 Proton-conducting membrane transporter DEH84_11175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DEH84_11180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DEH84_11185 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DEH84_11190 PF12838 4Fe-4S dicluster domain DEH84_11195 PF00146 NADH dehydrogenase DEH84_11200 PF00384 Molybdopterin oxidoreductase DEH84_11200 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal DEH84_11200 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DEH84_11205 PF10531 SLBB domain DEH84_11205 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DEH84_11205 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DEH84_11215 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DEH84_11220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DEH84_11225 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEH84_11230 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DEH84_11240 PF03840 Preprotein translocase SecG subunit DEH84_11245 PF00121 Triosephosphate isomerase DEH84_11250 PF03725 3' exoribonuclease family, domain 2 DEH84_11250 PF00013 KH domain DEH84_11250 PF01138 3' exoribonuclease family, domain 1 DEH84_11250 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DEH84_11250 PF00575 S1 RNA binding domain DEH84_11255 PF00312 Ribosomal protein S15 DEH84_11260 PF00814 Glycoprotease family DEH84_11265 PF00072 Response regulator receiver domain DEH84_11265 PF03861 ANTAR domain DEH84_11275 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_11280 PF00005 ABC transporter DEH84_11285 PF01790 Prolipoprotein diacylglyceryl transferase DEH84_11295 PF00689 Cation transporting ATPase, C-terminus DEH84_11295 PF00690 Cation transporter/ATPase, N-terminus DEH84_11305 PF00654 Voltage gated chloride channel DEH84_11310 PF00920 Dehydratase family DEH84_11325 PF08946 Osmosensory transporter coiled coil DEH84_11325 PF00083 Sugar (and other) transporter DEH84_11330 PF00501 AMP-binding enzyme DEH84_11330 PF16177 Acetyl-coenzyme A synthetase N-terminus DEH84_11330 PF13193 AMP-binding enzyme C-terminal domain DEH84_11335 PF03350 Uncharacterized protein family, UPF0114 DEH84_11345 PF12706 Beta-lactamase superfamily domain DEH84_11360 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_11360 PF02861 Clp amino terminal domain, pathogenicity island component DEH84_11360 PF17871 AAA lid domain DEH84_11360 PF07724 AAA domain (Cdc48 subfamily) DEH84_11360 PF10431 C-terminal, D2-small domain, of ClpB protein DEH84_11365 PF00990 Diguanylate cyclase, GGDEF domain DEH84_11370 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DEH84_11375 PF02391 MoaE protein DEH84_11380 PF03454 MoeA C-terminal region (domain IV) DEH84_11380 PF03453 MoeA N-terminal region (domain I and II) DEH84_11380 PF00994 Probable molybdopterin binding domain DEH84_11390 PF14821 Threonine synthase N terminus DEH84_11390 PF00291 Pyridoxal-phosphate dependent enzyme DEH84_11395 PF01842 ACT domain DEH84_11395 PF00742 Homoserine dehydrogenase DEH84_11395 PF03447 Homoserine dehydrogenase, NAD binding domain DEH84_11400 PF00155 Aminotransferase class I and II DEH84_11405 PF04430 Protein of unknown function (DUF498/DUF598) DEH84_11410 PF00578 AhpC/TSA family DEH84_11415 PF02562 PhoH-like protein DEH84_11415 PF13638 PIN domain DEH84_11425 PF09209 Tetracyclin repressor-like, C-terminal domain DEH84_11425 PF00440 Bacterial regulatory proteins, tetR family DEH84_11430 PF13533 Biotin-lipoyl like DEH84_11435 PF00005 ABC transporter DEH84_11445 PF00561 alpha/beta hydrolase fold DEH84_11445 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DEH84_11450 PF01515 Phosphate acetyl/butaryl transferase DEH84_11455 PF02321 Outer membrane efflux protein DEH84_11460 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DEH84_11460 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DEH84_11465 PF10369 Small subunit of acetolactate synthase DEH84_11470 PF00205 Thiamine pyrophosphate enzyme, central domain DEH84_11470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DEH84_11470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DEH84_11495 PF03641 Possible lysine decarboxylase DEH84_11500 PF00543 Nitrogen regulatory protein P-II DEH84_11505 PF02540 NAD synthase DEH84_11505 PF00795 Carbon-nitrogen hydrolase DEH84_11520 PF00069 Protein kinase domain DEH84_11520 PF14032 PknH-like extracellular domain DEH84_11525 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_11530 PF00557 Metallopeptidase family M24 DEH84_11530 PF01321 Creatinase/Prolidase N-terminal domain DEH84_11545 PF01814 Hemerythrin HHE cation binding domain DEH84_11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_11560 PF03466 LysR substrate binding domain DEH84_11565 PF02798 Glutathione S-transferase, N-terminal domain DEH84_11570 PF02321 Outer membrane efflux protein DEH84_11575 PF12704 MacB-like periplasmic core domain DEH84_11575 PF00005 ABC transporter DEH84_11575 PF02687 FtsX-like permease family DEH84_11580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_11590 PF17763 Glutaminase/Asparaginase C-terminal domain DEH84_11590 PF00710 Asparaginase, N-terminal DEH84_11595 PF01726 LexA DNA binding domain DEH84_11595 PF00717 Peptidase S24-like DEH84_11605 PF00106 short chain dehydrogenase DEH84_11610 PF02803 Thiolase, C-terminal domain DEH84_11610 PF00108 Thiolase, N-terminal domain DEH84_11615 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus DEH84_11630 PF04345 Chorismate lyase DEH84_11635 PF00293 NUDIX domain DEH84_11635 PF03099 Biotin/lipoate A/B protein ligase family DEH84_11640 PF03412 Peptidase C39 family DEH84_11640 PF00664 ABC transporter transmembrane region DEH84_11640 PF00005 ABC transporter DEH84_11645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_11645 PF00529 HlyD membrane-fusion protein of T1SS DEH84_11660 PF02321 Outer membrane efflux protein DEH84_11675 PF18327 Proline utilization A proline dehydrogenase N-terminal domain DEH84_11675 PF01619 Proline dehydrogenase DEH84_11675 PF00171 Aldehyde dehydrogenase family DEH84_11675 PF14850 DNA-binding domain of Proline dehydrogenase DEH84_11680 PF01037 Lrp/AsnC ligand binding domain DEH84_11690 PF13458 Periplasmic binding protein DEH84_11705 PF00883 Cytosol aminopeptidase family, catalytic domain DEH84_11705 PF02789 Cytosol aminopeptidase family, N-terminal domain DEH84_11715 PF03739 Lipopolysaccharide export system permease LptF/LptG DEH84_11725 PF03466 LysR substrate binding domain DEH84_11725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_11735 PF00378 Enoyl-CoA hydratase/isomerase DEH84_11750 PF00403 Heavy-metal-associated domain DEH84_11760 PF08447 PAS fold DEH84_11760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_11785 PF00271 Helicase conserved C-terminal domain DEH84_11785 PF11898 Domain of unknown function (DUF3418) DEH84_11785 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold DEH84_11785 PF00270 DEAD/DEAH box helicase DEH84_11785 PF04408 Helicase associated domain (HA2) DEH84_11790 PF00072 Response regulator receiver domain DEH84_11790 PF00990 Diguanylate cyclase, GGDEF domain DEH84_11795 PF00696 Amino acid kinase family DEH84_11795 PF00583 Acetyltransferase (GNAT) family DEH84_11800 PF04362 Bacterial Fe(2+) trafficking DEH84_11815 PF14403 Circularly permuted ATP-grasp type 2 DEH84_11820 PF08379 Bacterial transglutaminase-like N-terminal region DEH84_11820 PF01841 Transglutaminase-like superfamily DEH84_11825 PF04174 A circularly permuted ATPgrasp DEH84_11830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_11835 PF00873 AcrB/AcrD/AcrF family DEH84_11845 PF00440 Bacterial regulatory proteins, tetR family DEH84_11850 PF00111 2Fe-2S iron-sulfur cluster binding domain DEH84_11850 PF00970 Oxidoreductase FAD-binding domain DEH84_11850 PF00175 Oxidoreductase NAD-binding domain DEH84_11855 PF00487 Fatty acid desaturase DEH84_11860 PF02685 Glucokinase DEH84_11865 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DEH84_11870 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DEH84_11870 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DEH84_11875 PF00920 Dehydratase family DEH84_11880 PF01081 KDPG and KHG aldolase DEH84_11885 PF01418 Helix-turn-helix domain, rpiR family DEH84_11885 PF02685 Glucokinase DEH84_11885 PF01380 SIS domain DEH84_11890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_11895 PF00005 ABC transporter DEH84_11905 PF00005 ABC transporter DEH84_11905 PF02687 FtsX-like permease family DEH84_11905 PF12704 MacB-like periplasmic core domain DEH84_11930 PF00485 Phosphoribulokinase / Uridine kinase family DEH84_11935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DEH84_11940 PF17866 AAA lid domain DEH84_11940 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_11945 PF00101 Ribulose bisphosphate carboxylase, small chain DEH84_11950 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain DEH84_11950 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain DEH84_11960 PF03466 LysR substrate binding domain DEH84_11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_11965 PF04055 Radical SAM superfamily DEH84_11965 PF13186 Iron-sulfur cluster-binding domain DEH84_11970 PF05402 Coenzyme PQQ synthesis protein D (PqqD) DEH84_11975 PF03070 TENA/THI-4/PQQC family DEH84_11980 PF12706 Beta-lactamase superfamily domain DEH84_11985 PF08042 PqqA family DEH84_11990 PF00561 alpha/beta hydrolase fold DEH84_11995 PF00672 HAMP domain DEH84_11995 PF16448 LapD/MoxY periplasmic domain DEH84_11995 PF07730 Histidine kinase DEH84_12000 PF00196 Bacterial regulatory proteins, luxR family DEH84_12000 PF00072 Response regulator receiver domain DEH84_12005 PF02803 Thiolase, C-terminal domain DEH84_12005 PF00108 Thiolase, N-terminal domain DEH84_12015 PF12833 Helix-turn-helix domain DEH84_12020 PF00474 Sodium:solute symporter family DEH84_12025 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DEH84_12025 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEH84_12045 PF01569 PAP2 superfamily DEH84_12060 PF00990 Diguanylate cyclase, GGDEF domain DEH84_12065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain DEH84_12070 PF01433 Peptidase family M1 domain DEH84_12070 PF17432 Domain of unknown function (DUF3458_C) ARM repeats DEH84_12070 PF11940 Domain of unknown function (DUF3458) Ig-like fold DEH84_12085 PF03707 Bacterial signalling protein N terminal repeat DEH84_12085 PF00563 EAL domain DEH84_12085 PF00990 Diguanylate cyclase, GGDEF domain DEH84_12095 PF02417 Chromate transporter DEH84_12110 PF00534 Glycosyl transferases group 1 DEH84_12110 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) DEH84_12115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DEH84_12115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DEH84_12115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DEH84_12115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DEH84_12125 PF01575 MaoC like domain DEH84_12160 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEH84_12165 PF01053 Cys/Met metabolism PLP-dependent enzyme DEH84_12170 PF00156 Phosphoribosyl transferase domain DEH84_12185 PF08245 Mur ligase middle domain DEH84_12185 PF02875 Mur ligase family, glutamate ligase domain DEH84_12190 PF01039 Carboxyl transferase domain DEH84_12190 PF17848 Acetyl-coA carboxylase zinc finger domain DEH84_12195 PF00290 Tryptophan synthase alpha chain DEH84_12200 PF00291 Pyridoxal-phosphate dependent enzyme DEH84_12205 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DEH84_12210 PF01416 tRNA pseudouridine synthase DEH84_12220 PF02774 Semialdehyde dehydrogenase, dimerisation domain DEH84_12220 PF01118 Semialdehyde dehydrogenase, NAD binding domain DEH84_12225 PF00180 Isocitrate/isopropylmalate dehydrogenase DEH84_12230 PF00694 Aconitase C-terminal domain DEH84_12240 PF00330 Aconitase family (aconitate hydratase) DEH84_12245 PF00285 Citrate synthase, C-terminal domain DEH84_12250 PF03937 Flavinator of succinate dehydrogenase DEH84_12255 PF13085 2Fe-2S iron-sulfur cluster binding domain DEH84_12260 PF00890 FAD binding domain DEH84_12260 PF02910 Fumarate reductase flavoprotein C-term DEH84_12265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DEH84_12275 PF07702 UTRA domain DEH84_12275 PF00392 Bacterial regulatory proteins, gntR family DEH84_12280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DEH84_12280 PF00056 lactate/malate dehydrogenase, NAD binding domain DEH84_12295 PF06506 Propionate catabolism activator DEH84_12295 PF00158 Sigma-54 interaction domain DEH84_12295 PF02954 Bacterial regulatory protein, Fis family DEH84_12305 PF00285 Citrate synthase, C-terminal domain DEH84_12310 PF00330 Aconitase family (aconitate hydratase) DEH84_12310 PF00694 Aconitase C-terminal domain DEH84_12330 PF04303 PrpF protein DEH84_12340 PF11791 Aconitate B N-terminal domain DEH84_12340 PF00330 Aconitase family (aconitate hydratase) DEH84_12340 PF06434 Aconitate hydratase 2 N-terminus DEH84_12350 PF17092 Penicillin-binding protein OB-like domain DEH84_12350 PF00905 Penicillin binding protein transpeptidase domain DEH84_12350 PF00912 Transglycosylase DEH84_12355 PF01863 Protein of unknown function DUF45 DEH84_12360 PF08411 Exonuclease C-terminal DEH84_12360 PF00929 Exonuclease DEH84_12365 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DEH84_12365 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DEH84_12370 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_12370 PF00672 HAMP domain DEH84_12370 PF00512 His Kinase A (phospho-acceptor) domain DEH84_12370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_12370 PF00072 Response regulator receiver domain DEH84_12370 PF01627 Hpt domain DEH84_12375 PF00849 RNA pseudouridylate synthase DEH84_12380 PF13593 SBF-like CPA transporter family (DUF4137) DEH84_12385 PF00694 Aconitase C-terminal domain DEH84_12385 PF00330 Aconitase family (aconitate hydratase) DEH84_12390 PF00561 alpha/beta hydrolase fold DEH84_12395 PF03960 ArsC family DEH84_12405 PF00171 Aldehyde dehydrogenase family DEH84_12415 PF02954 Bacterial regulatory protein, Fis family DEH84_12415 PF01590 GAF domain DEH84_12415 PF00158 Sigma-54 interaction domain DEH84_12425 PF13419 Haloacid dehalogenase-like hydrolase DEH84_12430 PF01050 Mannose-6-phosphate isomerase DEH84_12430 PF00483 Nucleotidyl transferase DEH84_12435 PF16363 GDP-mannose 4,6 dehydratase DEH84_12445 PF02397 Bacterial sugar transferase DEH84_12455 PF03109 ABC1 family DEH84_12475 PF02938 GAD domain DEH84_12475 PF01336 OB-fold nucleic acid binding domain DEH84_12475 PF00152 tRNA synthetases class II (D, K and N) DEH84_12490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_12490 PF00529 HlyD membrane-fusion protein of T1SS DEH84_12495 PF00873 AcrB/AcrD/AcrF family DEH84_12500 PF00543 Nitrogen regulatory protein P-II DEH84_12505 PF00293 NUDIX domain DEH84_12515 PF13091 PLD-like domain DEH84_12520 PF04679 ATP dependent DNA ligase C terminal region DEH84_12520 PF01068 ATP dependent DNA ligase domain DEH84_12520 PF04675 DNA ligase N terminus DEH84_12530 PF02654 Cobalamin-5-phosphate synthase DEH84_12535 PF02277 Phosphoribosyltransferase DEH84_12540 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DEH84_12540 PF07685 CobB/CobQ-like glutamine amidotransferase domain DEH84_12550 PF03186 CobD/Cbib protein DEH84_12555 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP DEH84_12555 PF12557 Cob(I)alamin adenosyltransferase N terminal DEH84_12560 PF07685 CobB/CobQ-like glutamine amidotransferase domain DEH84_12560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DEH84_12565 PF00005 ABC transporter DEH84_12570 PF01032 FecCD transport family DEH84_12580 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DEH84_12585 PF07715 TonB-dependent Receptor Plug Domain DEH84_12585 PF00593 TonB dependent receptor DEH84_12600 PF00072 Response regulator receiver domain DEH84_12600 PF00990 Diguanylate cyclase, GGDEF domain DEH84_12605 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DEH84_12605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DEH84_12630 PF02245 Methylpurine-DNA glycosylase (MPG) DEH84_12650 PF00873 AcrB/AcrD/AcrF family DEH84_12655 PF13533 Biotin-lipoyl like DEH84_12670 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DEH84_12670 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DEH84_12680 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DEH84_12685 PF00374 Nickel-dependent hydrogenase DEH84_12695 PF00378 Enoyl-CoA hydratase/isomerase DEH84_12700 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_12700 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DEH84_12705 PF03551 Transcriptional regulator PadR-like family DEH84_12705 PF10400 Virulence activator alpha C-term DEH84_12725 PF17871 AAA lid domain DEH84_12725 PF07724 AAA domain (Cdc48 subfamily) DEH84_12725 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_12725 PF10431 C-terminal, D2-small domain, of ClpB protein DEH84_12745 PF05638 Type VI secretion system effector, Hcp DEH84_12780 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_12780 PF16193 AAA C-terminal domain DEH84_12780 PF12002 MgsA AAA+ ATPase C terminal DEH84_12785 PF00271 Helicase conserved C-terminal domain DEH84_12785 PF00270 DEAD/DEAH box helicase DEH84_12790 PF03548 Outer membrane lipoprotein carrier protein LolA DEH84_12795 PF01580 FtsK/SpoIIIE family DEH84_12795 PF09397 Ftsk gamma domain DEH84_12795 PF17854 FtsK alpha domain DEH84_12795 PF13491 4TM region of DNA translocase FtsK/SpoIIIE DEH84_12800 PF00027 Cyclic nucleotide-binding domain DEH84_12800 PF13545 Crp-like helix-turn-helix domain DEH84_12805 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_12810 PF00830 Ribosomal L28 family DEH84_12815 PF00471 Ribosomal protein L33 DEH84_12820 PF01406 tRNA synthetases class I (C) catalytic domain DEH84_12840 PF01979 Amidohydrolase family DEH84_12845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DEH84_12845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DEH84_12850 PF00156 Phosphoribosyl transferase domain DEH84_12855 PF03652 Holliday junction resolvase DEH84_12860 PF02622 Uncharacterized ACR, COG1678 DEH84_12865 PF03441 FAD binding domain of DNA photolyase DEH84_12865 PF00875 DNA photolyase DEH84_12870 PF00990 Diguanylate cyclase, GGDEF domain DEH84_12870 PF00072 Response regulator receiver domain DEH84_12875 PF01584 CheW-like domain DEH84_12875 PF01627 Hpt domain DEH84_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_12875 PF02895 Signal transducing histidine kinase, homodimeric domain DEH84_12880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_12880 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DEH84_12890 PF00072 Response regulator receiver domain DEH84_12895 PF00072 Response regulator receiver domain DEH84_12900 PF00301 Rubredoxin DEH84_12910 PF00202 Aminotransferase class-III DEH84_12915 PF02875 Mur ligase family, glutamate ligase domain DEH84_12915 PF08245 Mur ligase middle domain DEH84_12915 PF01225 Mur ligase family, catalytic domain DEH84_12920 PF03009 Glycerophosphoryl diester phosphodiesterase family DEH84_12935 PF01584 CheW-like domain DEH84_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_12940 PF01627 Hpt domain DEH84_12940 PF02895 Signal transducing histidine kinase, homodimeric domain DEH84_12940 PF09078 CheY binding DEH84_12940 PF01584 CheW-like domain DEH84_12945 PF00072 Response regulator receiver domain DEH84_12955 PF07730 Histidine kinase DEH84_12955 PF17200 Single Cache domain 2 DEH84_12960 PF00196 Bacterial regulatory proteins, luxR family DEH84_12960 PF00072 Response regulator receiver domain DEH84_12965 PF00210 Ferritin-like domain DEH84_12975 PF13361 UvrD-like helicase C-terminal domain DEH84_12975 PF00580 UvrD/REP helicase N-terminal domain DEH84_12980 PF00478 IMP dehydrogenase / GMP reductase domain DEH84_12980 PF00571 CBS domain DEH84_13000 PF00582 Universal stress protein family DEH84_13010 PF01202 Shikimate kinase DEH84_13015 PF11741 AMIN domain DEH84_13015 PF00263 Bacterial type II and III secretion system protein DEH84_13015 PF03958 Bacterial type II/III secretion system short domain DEH84_13015 PF07660 Secretin and TonB N terminus short domain DEH84_13040 PF17092 Penicillin-binding protein OB-like domain DEH84_13040 PF00912 Transglycosylase DEH84_13040 PF00905 Penicillin binding protein transpeptidase domain DEH84_13045 PF01491 Frataxin-like domain DEH84_13055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DEH84_13055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DEH84_13060 PF13609 Gram-negative porin DEH84_13065 PF13609 Gram-negative porin DEH84_13070 PF05496 Holliday junction DNA helicase RuvB P-loop domain DEH84_13070 PF05491 RuvB C-terminal winged helix domain DEH84_13070 PF17864 RuvB AAA lid domain DEH84_13075 PF01206 Sulfurtransferase TusA DEH84_13080 PF00291 Pyridoxal-phosphate dependent enzyme DEH84_13090 PF07969 Amidohydrolase family DEH84_13110 PF00892 EamA-like transporter family DEH84_13125 PF01252 Signal peptidase (SPase) II DEH84_13130 PF00133 tRNA synthetases class I (I, L, M and V) DEH84_13130 PF08264 Anticodon-binding domain of tRNA DEH84_13130 PF06827 Zinc finger found in FPG and IleRS DEH84_13135 PF01687 Riboflavin kinase DEH84_13135 PF06574 FAD synthetase DEH84_13140 PF01479 S4 domain DEH84_13140 PF00849 RNA pseudouridylate synthase DEH84_13145 PF00497 Bacterial extracellular solute-binding proteins, family 3 DEH84_13150 PF17763 Glutaminase/Asparaginase C-terminal domain DEH84_13150 PF00710 Asparaginase, N-terminal DEH84_13155 PF13609 Gram-negative porin DEH84_13160 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_13165 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_13170 PF00005 ABC transporter DEH84_13175 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEH84_13175 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DEH84_13180 PF02743 Cache domain DEH84_13180 PF00512 His Kinase A (phospho-acceptor) domain DEH84_13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13185 PF00072 Response regulator receiver domain DEH84_13185 PF02954 Bacterial regulatory protein, Fis family DEH84_13185 PF00158 Sigma-54 interaction domain DEH84_13195 PF04461 Protein of unknown function (DUF520) DEH84_13200 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DEH84_13200 PF01565 FAD binding domain DEH84_13205 PF06865 Pyrimidine/purine nucleoside phosphorylase DEH84_13210 PF00764 Arginosuccinate synthase DEH84_13220 PF04055 Radical SAM superfamily DEH84_13225 PF00486 Transcriptional regulatory protein, C terminal DEH84_13225 PF00072 Response regulator receiver domain DEH84_13230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13230 PF00072 Response regulator receiver domain DEH84_13230 PF13426 PAS domain DEH84_13235 PF00501 AMP-binding enzyme DEH84_13235 PF13193 AMP-binding enzyme C-terminal domain DEH84_13245 PF00474 Sodium:solute symporter family DEH84_13250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_13250 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_13250 PF12806 Acetyl-CoA dehydrogenase C-terminal like DEH84_13250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_13255 PF14579 Helix-hairpin-helix motif DEH84_13255 PF02811 PHP domain DEH84_13255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DEH84_13255 PF07733 Bacterial DNA polymerase III alpha NTPase domain DEH84_13255 PF01336 OB-fold nucleic acid binding domain DEH84_13265 PF00743 Flavin-binding monooxygenase-like DEH84_13270 PF07859 alpha/beta hydrolase fold DEH84_13275 PF00106 short chain dehydrogenase DEH84_13280 PF08386 TAP-like protein DEH84_13280 PF00561 alpha/beta hydrolase fold DEH84_13290 PF03358 NADPH-dependent FMN reductase DEH84_13295 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ DEH84_13300 PF02678 Pirin DEH84_13300 PF17954 Quercetinase C-terminal cupin domain DEH84_13305 PF03466 LysR substrate binding domain DEH84_13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_13310 PF00749 tRNA synthetases class I (E and Q), catalytic domain DEH84_13320 PF00929 Exonuclease DEH84_13325 PF01435 Peptidase family M48 DEH84_13330 PF01329 Pterin 4 alpha carbinolamine dehydratase DEH84_13335 PF03193 RsgA GTPase DEH84_13350 PF00293 NUDIX domain DEH84_13355 PF01245 Ribosomal protein L19 DEH84_13360 PF01746 tRNA (Guanine-1)-methyltransferase DEH84_13365 PF01782 RimM N-terminal domain DEH84_13365 PF05239 PRC-barrel domain DEH84_13370 PF00886 Ribosomal protein S16 DEH84_13380 PF00586 AIR synthase related protein, N-terminal domain DEH84_13380 PF02769 AIR synthase related protein, C-terminal domain DEH84_13385 PF04102 SlyX DEH84_13395 PF01761 3-dehydroquinate synthase DEH84_13400 PF01966 HD domain DEH84_13400 PF13286 Phosphohydrolase-associated domain DEH84_13410 PF13181 Tetratricopeptide repeat DEH84_13410 PF00535 Glycosyl transferase family 2 DEH84_13415 PF00700 Bacterial flagellin C-terminal helical region DEH84_13415 PF00669 Bacterial flagellin N-terminal helical region DEH84_13420 PF00700 Bacterial flagellin C-terminal helical region DEH84_13420 PF00669 Bacterial flagellin N-terminal helical region DEH84_13425 PF02465 Flagellar hook-associated protein 2 N-terminus DEH84_13425 PF07195 Flagellar hook-associated protein 2 C-terminus DEH84_13430 PF07196 Flagellin hook IN motif DEH84_13430 PF07195 Flagellar hook-associated protein 2 C-terminus DEH84_13430 PF02465 Flagellar hook-associated protein 2 N-terminus DEH84_13435 PF02561 Flagellar protein FliS DEH84_13445 PF07238 PilZ domain DEH84_13445 PF07317 Flagellar regulator YcgR DEH84_13450 PF03900 Porphobilinogen deaminase, C-terminal domain DEH84_13450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain DEH84_13460 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase DEH84_13490 PF00512 His Kinase A (phospho-acceptor) domain DEH84_13490 PF00672 HAMP domain DEH84_13490 PF00989 PAS fold DEH84_13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13495 PF00486 Transcriptional regulatory protein, C terminal DEH84_13495 PF00072 Response regulator receiver domain DEH84_13500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13500 PF00512 His Kinase A (phospho-acceptor) domain DEH84_13505 PF01627 Hpt domain DEH84_13505 PF00072 Response regulator receiver domain DEH84_13505 PF01584 CheW-like domain DEH84_13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13510 PF03449 Transcription elongation factor, N-terminal DEH84_13510 PF01272 Transcription elongation factor, GreA/GreB, C-term DEH84_13515 PF13291 ACT domain DEH84_13515 PF04607 Region found in RelA / SpoT proteins DEH84_13515 PF02824 TGS domain DEH84_13520 PF01192 RNA polymerase Rpb6 DEH84_13525 PF00625 Guanylate kinase DEH84_13530 PF08340 Domain of unknown function (DUF1732) DEH84_13530 PF03755 YicC-like family, N-terminal region DEH84_13535 PF00069 Protein kinase domain DEH84_13535 PF03793 PASTA domain DEH84_13545 PF03725 3' exoribonuclease family, domain 2 DEH84_13545 PF01138 3' exoribonuclease family, domain 1 DEH84_13550 PF01725 Ham1 family DEH84_13555 PF04055 Radical SAM superfamily DEH84_13555 PF06969 HemN C-terminal domain DEH84_13560 PF13193 AMP-binding enzyme C-terminal domain DEH84_13560 PF00501 AMP-binding enzyme DEH84_13570 PF00732 GMC oxidoreductase DEH84_13570 PF05199 GMC oxidoreductase DEH84_13575 PF00691 OmpA family DEH84_13580 PF03989 DNA gyrase C-terminal domain, beta-propeller DEH84_13580 PF00521 DNA gyrase/topoisomerase IV, subunit A DEH84_13590 PF00266 Aminotransferase class-V DEH84_13595 PF01842 ACT domain DEH84_13595 PF01817 Chorismate mutase type II DEH84_13595 PF00800 Prephenate dehydratase DEH84_13600 PF02153 Prephenate dehydrogenase DEH84_13605 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DEH84_13610 PF00575 S1 RNA binding domain DEH84_13615 PF00216 Bacterial DNA-binding protein DEH84_13625 PF18073 Rubredoxin metal binding domain DEH84_13630 PF04314 Copper chaperone PCu(A)C DEH84_13635 PF01078 Magnesium chelatase, subunit ChlI DEH84_13635 PF13335 Magnesium chelatase, subunit ChlI C-terminal DEH84_13640 PF00543 Nitrogen regulatory protein P-II DEH84_13645 PF00909 Ammonium Transporter Family DEH84_13655 PF02705 K+ potassium transporter DEH84_13660 PF03594 Benzoate membrane transport protein DEH84_13665 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain DEH84_13665 PF02951 Prokaryotic glutathione synthetase, N-terminal domain DEH84_13670 PF00486 Transcriptional regulatory protein, C terminal DEH84_13670 PF00072 Response regulator receiver domain DEH84_13685 PF05524 PEP-utilising enzyme, N-terminal DEH84_13685 PF00391 PEP-utilising enzyme, mobile domain DEH84_13685 PF02896 PEP-utilising enzyme, TIM barrel domain DEH84_13695 PF01029 NusB family DEH84_13695 PF01189 16S rRNA methyltransferase RsmB/F DEH84_13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13705 PF00672 HAMP domain DEH84_13705 PF00989 PAS fold DEH84_13705 PF00512 His Kinase A (phospho-acceptor) domain DEH84_13710 PF02954 Bacterial regulatory protein, Fis family DEH84_13710 PF00072 Response regulator receiver domain DEH84_13710 PF00158 Sigma-54 interaction domain DEH84_13725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DEH84_13735 PF00534 Glycosyl transferases group 1 DEH84_13735 PF13439 Glycosyltransferase Family 4 DEH84_13745 PF00535 Glycosyl transferase family 2 DEH84_13745 PF01501 Glycosyl transferase family 8 DEH84_13760 PF03275 UDP-galactopyranose mutase DEH84_13775 PF01075 Glycosyltransferase family 9 (heptosyltransferase) DEH84_13780 PF00005 ABC transporter DEH84_13780 PF00664 ABC transporter transmembrane region DEH84_13785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain DEH84_13785 PF00437 Type II/IV secretion system protein DEH84_13790 PF00482 Type II secretion system (T2SS), protein F DEH84_13795 PF06750 Bacterial Peptidase A24 N-terminal domain DEH84_13795 PF01478 Type IV leader peptidase family DEH84_13800 PF01121 Dephospho-CoA kinase DEH84_13805 PF07072 Cell division protein DEH84_13810 PF03884 DNA gyrase inhibitor YacG DEH84_13815 PF00271 Helicase conserved C-terminal domain DEH84_13815 PF08494 DEAD/H associated DEH84_13815 PF00270 DEAD/DEAH box helicase DEH84_13820 PF06082 Exopolysaccharide biosynthesis protein YbjH DEH84_13830 PF00953 Glycosyl transferase family 4 DEH84_13860 PF01531 Glycosyl transferase family 11 DEH84_13865 PF00535 Glycosyl transferase family 2 DEH84_13880 PF00301 Rubredoxin DEH84_13885 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_13885 PF18113 Rubredoxin binding C-terminal domain DEH84_13895 PF01551 Peptidase family M23 DEH84_13895 PF01476 LysM domain DEH84_13895 PF08525 Opacity-associated protein A N-terminal motif DEH84_13920 PF01043 SecA preprotein cross-linking domain DEH84_13920 PF07517 SecA DEAD-like domain DEH84_13920 PF07516 SecA Wing and Scaffold domain DEH84_13920 PF02810 SEC-C motif DEH84_13925 PF01960 ArgJ family DEH84_13940 PF01037 Lrp/AsnC ligand binding domain DEH84_13945 PF01266 FAD dependent oxidoreductase DEH84_13950 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DEH84_13955 PF13458 Periplasmic binding protein DEH84_13960 PF00989 PAS fold DEH84_13960 PF00512 His Kinase A (phospho-acceptor) domain DEH84_13960 PF18698 Histidine kinase sensor domain DEH84_13960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_13960 PF00672 HAMP domain DEH84_13965 PF00106 short chain dehydrogenase DEH84_13970 PF00672 HAMP domain DEH84_13970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_13970 PF02203 Tar ligand binding domain homologue DEH84_13980 PF00348 Polyprenyl synthetase DEH84_13985 PF01494 FAD binding domain DEH84_13995 PF00171 Aldehyde dehydrogenase family DEH84_14000 PF01925 Sulfite exporter TauE/SafE DEH84_14015 PF00175 Oxidoreductase NAD-binding domain DEH84_14015 PF00970 Oxidoreductase FAD-binding domain DEH84_14020 PF06508 Queuosine biosynthesis protein QueC DEH84_14025 PF04011 LemA family DEH84_14045 PF00381 PTS HPr component phosphorylation site DEH84_14065 PF00578 AhpC/TSA family DEH84_14075 PF08335 GlnD PII-uridylyltransferase DEH84_14075 PF03710 Glutamate-ammonia ligase adenylyltransferase DEH84_14135 PF16363 GDP-mannose 4,6 dehydratase DEH84_14145 PF09721 Transmembrane exosortase (Exosortase_EpsH) DEH84_14150 PF00535 Glycosyl transferase family 2 DEH84_14155 PF03808 Glycosyl transferase WecB/TagA/CpsF family DEH84_14160 PF01370 NAD dependent epimerase/dehydratase family DEH84_14170 PF10609 NUBPL iron-transfer P-loop NTPase DEH84_14175 PF16363 GDP-mannose 4,6 dehydratase DEH84_14180 PF09721 Transmembrane exosortase (Exosortase_EpsH) DEH84_14205 PF00535 Glycosyl transferase family 2 DEH84_14210 PF00534 Glycosyl transferases group 1 DEH84_14210 PF13579 Glycosyl transferase 4-like domain DEH84_14240 PF01695 IstB-like ATP binding protein DEH84_14245 PF02796 Helix-turn-helix domain of resolvase DEH84_14245 PF00665 Integrase core domain DEH84_14260 PF02796 Helix-turn-helix domain of resolvase DEH84_14260 PF00665 Integrase core domain DEH84_14265 PF01695 IstB-like ATP binding protein DEH84_14275 PF01757 Acyltransferase family DEH84_14285 PF00534 Glycosyl transferases group 1 DEH84_14285 PF13439 Glycosyltransferase Family 4 DEH84_14290 PF16363 GDP-mannose 4,6 dehydratase DEH84_14295 PF04321 RmlD substrate binding domain DEH84_14300 PF00483 Nucleotidyl transferase DEH84_14305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DEH84_14310 PF00535 Glycosyl transferase family 2 DEH84_14315 PF01370 NAD dependent epimerase/dehydratase family DEH84_14320 PF00483 Nucleotidyl transferase DEH84_14325 PF00534 Glycosyl transferases group 1 DEH84_14325 PF13439 Glycosyltransferase Family 4 DEH84_14330 PF13439 Glycosyltransferase Family 4 DEH84_14330 PF00534 Glycosyl transferases group 1 DEH84_14365 PF01943 Polysaccharide biosynthesis protein DEH84_14385 PF09721 Transmembrane exosortase (Exosortase_EpsH) DEH84_14395 PF00535 Glycosyl transferase family 2 DEH84_14400 PF16363 GDP-mannose 4,6 dehydratase DEH84_14405 PF04321 RmlD substrate binding domain DEH84_14410 PF00483 Nucleotidyl transferase DEH84_14415 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DEH84_14425 PF01040 UbiA prenyltransferase family DEH84_14430 PF01565 FAD binding domain DEH84_14430 PF04030 D-arabinono-1,4-lactone oxidase DEH84_14435 PF00106 short chain dehydrogenase DEH84_14445 PF03466 LysR substrate binding domain DEH84_14445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_14455 PF00501 AMP-binding enzyme DEH84_14455 PF13193 AMP-binding enzyme C-terminal domain DEH84_14465 PF02803 Thiolase, C-terminal domain DEH84_14465 PF00108 Thiolase, N-terminal domain DEH84_14470 PF00378 Enoyl-CoA hydratase/isomerase DEH84_14475 PF00378 Enoyl-CoA hydratase/isomerase DEH84_14480 PF07690 Major Facilitator Superfamily DEH84_14485 PF13609 Gram-negative porin DEH84_14490 PF00135 Carboxylesterase family DEH84_14495 PF07690 Major Facilitator Superfamily DEH84_14500 PF00483 Nucleotidyl transferase DEH84_14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_14505 PF00512 His Kinase A (phospho-acceptor) domain DEH84_14505 PF00672 HAMP domain DEH84_14510 PF00072 Response regulator receiver domain DEH84_14510 PF00486 Transcriptional regulatory protein, C terminal DEH84_14525 PF02403 Seryl-tRNA synthetase N-terminal domain DEH84_14525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DEH84_14530 PF02401 LytB protein DEH84_14535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DEH84_14540 PF04002 RadC-like JAB domain DEH84_14555 PF10609 NUBPL iron-transfer P-loop NTPase DEH84_14560 PF07694 5TMR of 5TMR-LYT DEH84_14560 PF00990 Diguanylate cyclase, GGDEF domain DEH84_14565 PF03705 CheR methyltransferase, all-alpha domain DEH84_14565 PF01739 CheR methyltransferase, SAM binding domain DEH84_14570 PF03975 CheD chemotactic sensory transduction DEH84_14575 PF01339 CheB methylesterase DEH84_14575 PF00072 Response regulator receiver domain DEH84_14580 PF01734 Patatin-like phospholipase DEH84_14590 PF00118 TCP-1/cpn60 chaperonin family DEH84_14595 PF00166 Chaperonin 10 Kd subunit DEH84_14600 PF03466 LysR substrate binding domain DEH84_14600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_14605 PF12857 TOBE-like domain DEH84_14605 PF00005 ABC transporter DEH84_14605 PF17850 CysA C-terminal regulatory domain DEH84_14610 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_14615 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_14625 PF04143 Sulphur transport DEH84_14635 PF01053 Cys/Met metabolism PLP-dependent enzyme DEH84_14640 PF01738 Dienelactone hydrolase family DEH84_14650 PF03918 Cytochrome C biogenesis protein DEH84_14655 PF08534 Redoxin DEH84_14660 PF01578 Cytochrome C assembly protein DEH84_14660 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal DEH84_14665 PF03100 CcmE DEH84_14675 PF01578 Cytochrome C assembly protein DEH84_14680 PF03379 CcmB protein DEH84_14685 PF00005 ABC transporter DEH84_14690 PF13533 Biotin-lipoyl like DEH84_14695 PF00873 AcrB/AcrD/AcrF family DEH84_14705 PF01322 Cytochrome C' DEH84_14715 PF00034 Cytochrome c DEH84_14745 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_14755 PF00005 ABC transporter DEH84_14775 PF00158 Sigma-54 interaction domain DEH84_14790 PF10417 C-terminal domain of 1-Cys peroxiredoxin DEH84_14790 PF00578 AhpC/TSA family DEH84_14795 PF00106 short chain dehydrogenase DEH84_14815 PF13401 AAA domain DEH84_14815 PF01471 Putative peptidoglycan binding domain DEH84_14825 PF02397 Bacterial sugar transferase DEH84_14830 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DEH84_14840 PF13439 Glycosyltransferase Family 4 DEH84_14855 PF01336 OB-fold nucleic acid binding domain DEH84_14855 PF00152 tRNA synthetases class II (D, K and N) DEH84_14865 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DEH84_14865 PF00384 Molybdopterin oxidoreductase DEH84_14865 PF01568 Molydopterin dinucleotide binding domain DEH84_14875 PF00578 AhpC/TSA family DEH84_14880 PF01220 Dehydroquinase class II DEH84_14885 PF00364 Biotin-requiring enzyme DEH84_14890 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEH84_14890 PF02785 Biotin carboxylase C-terminal domain DEH84_14890 PF00289 Biotin carboxylase, N-terminal domain DEH84_14905 PF00294 pfkB family carbohydrate kinase DEH84_14915 PF00300 Histidine phosphatase superfamily (branch 1) DEH84_14925 PF00462 Glutaredoxin DEH84_14930 PF02556 Preprotein translocase subunit SecB DEH84_14935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DEH84_14935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DEH84_14940 PF00588 SpoU rRNA Methylase family DEH84_14950 PF00255 Glutathione peroxidase DEH84_14955 PF02735 Ku70/Ku80 beta-barrel domain DEH84_14965 PF01068 ATP dependent DNA ligase domain DEH84_14965 PF04679 ATP dependent DNA ligase C terminal region DEH84_14965 PF13298 DNA polymerase Ligase (LigD) DEH84_14975 PF04349 Periplasmic glucan biosynthesis protein, MdoG DEH84_14985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DEH84_15005 PF00551 Formyl transferase DEH84_15010 PF04542 Sigma-70 region 2 DEH84_15010 PF04545 Sigma-70, region 4 DEH84_15025 PF01063 Amino-transferase class IV DEH84_15030 PF00871 Acetokinase family DEH84_15035 PF01515 Phosphate acetyl/butaryl transferase DEH84_15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_15040 PF03466 LysR substrate binding domain DEH84_15045 PF03594 Benzoate membrane transport protein DEH84_15050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_15050 PF03466 LysR substrate binding domain DEH84_15055 PF04444 Catechol dioxygenase N terminus DEH84_15055 PF00775 Dioxygenase DEH84_15060 PF00355 Rieske [2Fe-2S] domain DEH84_15060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) DEH84_15065 PF00866 Ring hydroxylating beta subunit DEH84_15070 PF00111 2Fe-2S iron-sulfur cluster binding domain DEH84_15070 PF00970 Oxidoreductase FAD-binding domain DEH84_15070 PF00175 Oxidoreductase NAD-binding domain DEH84_15075 PF00106 short chain dehydrogenase DEH84_15080 PF07690 Major Facilitator Superfamily DEH84_15085 PF13609 Gram-negative porin DEH84_15090 PF00216 Bacterial DNA-binding protein DEH84_15095 PF00296 Luciferase-like monooxygenase DEH84_15100 PF07690 Major Facilitator Superfamily DEH84_15110 PF01614 Bacterial transcriptional regulator DEH84_15110 PF09339 IclR helix-turn-helix domain DEH84_15120 PF01196 Ribosomal protein L17 DEH84_15125 PF01000 RNA polymerase Rpb3/RpoA insert domain DEH84_15125 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DEH84_15125 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DEH84_15130 PF01479 S4 domain DEH84_15130 PF00163 Ribosomal protein S4/S9 N-terminal domain DEH84_15135 PF00411 Ribosomal protein S11 DEH84_15140 PF00416 Ribosomal protein S13/S18 DEH84_15145 PF00444 Ribosomal protein L36 DEH84_15150 PF00344 SecY translocase DEH84_15155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DEH84_15160 PF00327 Ribosomal protein L30p/L7e DEH84_15165 PF03719 Ribosomal protein S5, C-terminal domain DEH84_15165 PF00333 Ribosomal protein S5, N-terminal domain DEH84_15170 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DEH84_15175 PF00347 Ribosomal protein L6 DEH84_15180 PF00410 Ribosomal protein S8 DEH84_15185 PF00253 Ribosomal protein S14p/S29e DEH84_15190 PF00281 Ribosomal protein L5 DEH84_15190 PF00673 ribosomal L5P family C-terminus DEH84_15195 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DEH84_15200 PF00238 Ribosomal protein L14p/L23e DEH84_15205 PF01523 Putative modulator of DNA gyrase DEH84_15215 PF00561 alpha/beta hydrolase fold DEH84_15220 PF00561 alpha/beta hydrolase fold DEH84_15225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DEH84_15230 PF02021 Uncharacterised protein family UPF0102 DEH84_15240 PF04972 BON domain DEH84_15245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DEH84_15245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DEH84_15250 PF00437 Type II/IV secretion system protein DEH84_15260 PF00437 Type II/IV secretion system protein DEH84_15265 PF01168 Alanine racemase, N-terminal domain DEH84_15270 PF00196 Bacterial regulatory proteins, luxR family DEH84_15270 PF03472 Autoinducer binding domain DEH84_15275 PF00512 His Kinase A (phospho-acceptor) domain DEH84_15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_15275 PF00672 HAMP domain DEH84_15280 PF03807 NADP oxidoreductase coenzyme F420-dependent DEH84_15280 PF14748 Pyrroline-5-carboxylate reductase dimerisation DEH84_15285 PF01040 UbiA prenyltransferase family DEH84_15290 PF02321 Outer membrane efflux protein DEH84_15295 PF00873 AcrB/AcrD/AcrF family DEH84_15300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_15300 PF00529 HlyD membrane-fusion protein of T1SS DEH84_15305 PF08361 MAATS-type transcriptional repressor, C-terminal region DEH84_15305 PF00440 Bacterial regulatory proteins, tetR family DEH84_15310 PF00300 Histidine phosphatase superfamily (branch 1) DEH84_15320 PF05728 Uncharacterised protein family (UPF0227) DEH84_15325 PF00773 RNB domain DEH84_15335 PF08501 Shikimate dehydrogenase substrate binding domain DEH84_15335 PF01488 Shikimate / quinate 5-dehydrogenase DEH84_15335 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DEH84_15340 PF00912 Transglycosylase DEH84_15345 PF00270 DEAD/DEAH box helicase DEH84_15345 PF00271 Helicase conserved C-terminal domain DEH84_15350 PF01636 Phosphotransferase enzyme family DEH84_15355 PF04453 LPS transport system D DEH84_15360 PF00639 PPIC-type PPIASE domain DEH84_15360 PF09312 SurA N-terminal domain DEH84_15365 PF00398 Ribosomal RNA adenine dimethylase DEH84_15375 PF01743 Poly A polymerase head domain DEH84_15375 PF12627 Probable RNA and SrmB- binding site of polymerase A DEH84_15375 PF01966 HD domain DEH84_15380 PF02203 Tar ligand binding domain homologue DEH84_15380 PF00672 HAMP domain DEH84_15380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_15385 PF12327 FtsZ family, C-terminal domain DEH84_15385 PF00091 Tubulin/FtsZ family, GTPase domain DEH84_15390 PF02491 SHS2 domain inserted in FTSA DEH84_15395 PF03799 Cell division protein FtsQ DEH84_15395 PF08478 POTRA domain, FtsQ-type DEH84_15400 PF07478 D-ala D-ala ligase C-terminus DEH84_15400 PF01820 D-ala D-ala ligase N-terminus DEH84_15405 PF08245 Mur ligase middle domain DEH84_15405 PF01225 Mur ligase family, catalytic domain DEH84_15405 PF02875 Mur ligase family, glutamate ligase domain DEH84_15410 PF04101 Glycosyltransferase family 28 C-terminal domain DEH84_15410 PF03033 Glycosyltransferase family 28 N-terminal domain DEH84_15415 PF01098 Cell cycle protein DEH84_15420 PF08245 Mur ligase middle domain DEH84_15420 PF02875 Mur ligase family, glutamate ligase domain DEH84_15425 PF00953 Glycosyl transferase family 4 DEH84_15425 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DEH84_15430 PF08245 Mur ligase middle domain DEH84_15430 PF02875 Mur ligase family, glutamate ligase domain DEH84_15430 PF01225 Mur ligase family, catalytic domain DEH84_15435 PF02875 Mur ligase family, glutamate ligase domain DEH84_15435 PF08245 Mur ligase middle domain DEH84_15440 PF03717 Penicillin-binding Protein dimerisation domain DEH84_15440 PF00905 Penicillin binding protein transpeptidase domain DEH84_15445 PF04999 Cell division protein FtsL DEH84_15450 PF01795 MraW methylase family DEH84_15455 PF02381 MraZ protein, putative antitoxin-like DEH84_15465 PF07670 Nucleoside recognition DEH84_15465 PF02421 Ferrous iron transport protein B DEH84_15465 PF07664 Ferrous iron transport protein B C terminus DEH84_15480 PF01964 Radical SAM ThiC family DEH84_15480 PF13667 ThiC-associated domain DEH84_15485 PF01266 FAD dependent oxidoreductase DEH84_15495 PF05690 Thiazole biosynthesis protein ThiG DEH84_15500 PF08543 Phosphomethylpyrimidine kinase DEH84_15510 PF06968 Biotin and Thiamin Synthesis associated domain DEH84_15510 PF04055 Radical SAM superfamily DEH84_15515 PF03976 Polyphosphate kinase 2 (PPK2) DEH84_15535 PF01717 Cobalamin-independent synthase, Catalytic domain DEH84_15535 PF08267 Cobalamin-independent synthase, N-terminal domain DEH84_15545 PF00005 ABC transporter DEH84_15550 PF02687 FtsX-like permease family DEH84_15550 PF12704 MacB-like periplasmic core domain DEH84_15555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DEH84_15560 PF00743 Flavin-binding monooxygenase-like DEH84_15570 PF02230 Phospholipase/Carboxylesterase DEH84_15580 PF00535 Glycosyl transferase family 2 DEH84_15595 PF00005 ABC transporter DEH84_15595 PF00664 ABC transporter transmembrane region DEH84_15600 PF13533 Biotin-lipoyl like DEH84_15605 PF03466 LysR substrate binding domain DEH84_15605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_15610 PF13609 Gram-negative porin DEH84_15615 PF13458 Periplasmic binding protein DEH84_15620 PF00005 ABC transporter DEH84_15625 PF00005 ABC transporter DEH84_15625 PF12399 Branched-chain amino acid ATP-binding cassette transporter DEH84_15635 PF02653 Branched-chain amino acid transport system / permease component DEH84_15640 PF00766 Electron transfer flavoprotein FAD-binding domain DEH84_15640 PF01012 Electron transfer flavoprotein domain DEH84_15645 PF01012 Electron transfer flavoprotein domain DEH84_15650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_15650 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_15650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_15655 PF00378 Enoyl-CoA hydratase/isomerase DEH84_15660 PF13193 AMP-binding enzyme C-terminal domain DEH84_15660 PF00501 AMP-binding enzyme DEH84_15665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_15665 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_15665 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_15670 PF00378 Enoyl-CoA hydratase/isomerase DEH84_15680 PF12802 MarR family DEH84_15685 PF03466 LysR substrate binding domain DEH84_15685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_15690 PF00378 Enoyl-CoA hydratase/isomerase DEH84_15690 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEH84_15690 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEH84_15695 PF00108 Thiolase, N-terminal domain DEH84_15695 PF02803 Thiolase, C-terminal domain DEH84_15700 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_15700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_15700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_15705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_15705 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_15705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_15710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_15710 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_15710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_15720 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_15720 PF18158 Adaptive response protein AidB N-terminal domain DEH84_15720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_15730 PF03880 DbpA RNA binding domain DEH84_15730 PF00270 DEAD/DEAH box helicase DEH84_15730 PF00271 Helicase conserved C-terminal domain DEH84_15750 PF03741 Integral membrane protein TerC family DEH84_15765 PF02203 Tar ligand binding domain homologue DEH84_15765 PF00672 HAMP domain DEH84_15765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_15780 PF06470 SMC proteins Flexible Hinge Domain DEH84_15780 PF02463 RecF/RecN/SMC N terminal domain DEH84_15790 PF01810 LysE type translocator DEH84_15805 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain DEH84_15805 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain DEH84_15810 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_15815 PF03459 TOBE domain DEH84_15815 PF00005 ABC transporter DEH84_15820 PF03475 3-alpha domain DEH84_15820 PF03473 MOSC domain DEH84_15835 PF00004 ATPase family associated with various cellular activities (AAA) DEH84_15835 PF05362 Lon protease (S16) C-terminal proteolytic domain DEH84_15835 PF02190 ATP-dependent protease La (LON) substrate-binding domain DEH84_15840 PF00512 His Kinase A (phospho-acceptor) domain DEH84_15840 PF00072 Response regulator receiver domain DEH84_15840 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_15840 PF00672 HAMP domain DEH84_15840 PF01627 Hpt domain DEH84_15845 PF00196 Bacterial regulatory proteins, luxR family DEH84_15845 PF00072 Response regulator receiver domain DEH84_15850 PF00482 Type II secretion system (T2SS), protein F DEH84_15855 PF00437 Type II/IV secretion system protein DEH84_15890 PF07963 Prokaryotic N-terminal methylation motif DEH84_15890 PF02501 Type II secretion system (T2SS), protein I DEH84_15895 PF12019 Type II transport protein GspH DEH84_15895 PF07963 Prokaryotic N-terminal methylation motif DEH84_15900 PF07963 Prokaryotic N-terminal methylation motif DEH84_15900 PF08334 Type II secretion system (T2SS), protein G DEH84_15910 PF00291 Pyridoxal-phosphate dependent enzyme DEH84_15910 PF00585 C-terminal regulatory domain of Threonine dehydratase DEH84_15915 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DEH84_15915 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DEH84_15920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEH84_15920 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEH84_15925 PF00231 ATP synthase DEH84_15930 PF00306 ATP synthase alpha/beta chain, C terminal domain DEH84_15930 PF02874 ATP synthase alpha/beta family, beta-barrel domain DEH84_15930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DEH84_15935 PF00213 ATP synthase delta (OSCP) subunit DEH84_15940 PF00430 ATP synthase B/B' CF(0) DEH84_15945 PF00137 ATP synthase subunit C DEH84_15950 PF00119 ATP synthase A chain DEH84_15980 PF01208 Uroporphyrinogen decarboxylase (URO-D) DEH84_15985 PF05036 Sporulation related domain DEH84_15985 PF03330 Lytic transglycolase DEH84_15990 PF00561 alpha/beta hydrolase fold DEH84_15995 PF00580 UvrD/REP helicase N-terminal domain DEH84_15995 PF13361 UvrD-like helicase C-terminal domain DEH84_16000 PF02566 OsmC-like protein DEH84_16005 PF03232 Ubiquinone biosynthesis protein COQ7 DEH84_16010 PF01098 Cell cycle protein DEH84_16015 PF00905 Penicillin binding protein transpeptidase domain DEH84_16015 PF03717 Penicillin-binding Protein dimerisation domain DEH84_16020 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB DEH84_16020 PF08479 POTRA domain, ShlB-type DEH84_16050 PF02686 Glu-tRNAGln amidotransferase C subunit DEH84_16055 PF01425 Amidase DEH84_16060 PF02637 GatB domain DEH84_16060 PF02934 GatB/GatE catalytic domain DEH84_16085 PF00156 Phosphoribosyl transferase domain DEH84_16095 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DEH84_16100 PF01740 STAS domain DEH84_16100 PF00916 Sulfate permease family DEH84_16105 PF00743 Flavin-binding monooxygenase-like DEH84_16115 PF12833 Helix-turn-helix domain DEH84_16115 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEH84_16135 PF01738 Dienelactone hydrolase family DEH84_16140 PF12833 Helix-turn-helix domain DEH84_16145 PF02253 Phospholipase A1 DEH84_16150 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_16155 PF01965 DJ-1/PfpI family DEH84_16160 PF02769 AIR synthase related protein, C-terminal domain DEH84_16160 PF00586 AIR synthase related protein, N-terminal domain DEH84_16165 PF00581 Rhodanese-like domain DEH84_16170 PF00005 ABC transporter DEH84_16175 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16185 PF18267 Rubredoxin NAD+ reductase C-terminal domain DEH84_16185 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DEH84_16185 PF04324 BFD-like [2Fe-2S] binding domain DEH84_16185 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DEH84_16185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DEH84_16190 PF13806 Rieske-like [2Fe-2S] domain DEH84_16195 PF14760 Rnk N-terminus DEH84_16195 PF01272 Transcription elongation factor, GreA/GreB, C-term DEH84_16200 PF08376 Nitrate and nitrite sensing DEH84_16200 PF03861 ANTAR domain DEH84_16205 PF01226 Formate/nitrite transporter DEH84_16210 PF00069 Protein kinase domain DEH84_16215 PF05231 MASE1 DEH84_16215 PF08448 PAS fold DEH84_16215 PF00990 Diguanylate cyclase, GGDEF domain DEH84_16215 PF00563 EAL domain DEH84_16215 PF08447 PAS fold DEH84_16215 PF13426 PAS domain DEH84_16225 PF00746 LPXTG cell wall anchor motif DEH84_16225 PF00149 Calcineurin-like phosphoesterase DEH84_16225 PF00565 Staphylococcal nuclease homologue DEH84_16225 PF02872 5'-nucleotidase, C-terminal domain DEH84_16230 PF02080 TrkA-C domain DEH84_16230 PF00999 Sodium/hydrogen exchanger family DEH84_16230 PF03471 Transporter associated domain DEH84_16235 PF07237 Protein of unknown function (DUF1428) DEH84_16240 PF01627 Hpt domain DEH84_16240 PF00512 His Kinase A (phospho-acceptor) domain DEH84_16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_16240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_16240 PF00072 Response regulator receiver domain DEH84_16240 PF00672 HAMP domain DEH84_16245 PF12833 Helix-turn-helix domain DEH84_16250 PF00743 Flavin-binding monooxygenase-like DEH84_16255 PF00561 alpha/beta hydrolase fold DEH84_16275 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DEH84_16275 PF18766 SWI2/SNF2 ATPase DEH84_16275 PF12008 Type I restriction and modification enzyme - subunit R C terminal DEH84_16295 PF12161 HsdM N-terminal domain DEH84_16295 PF02384 N-6 DNA Methylase DEH84_16340 PF00817 impB/mucB/samB family DEH84_16340 PF11798 IMS family HHH motif DEH84_16340 PF13438 Domain of unknown function (DUF4113) DEH84_16340 PF11799 impB/mucB/samB family C-terminal domain DEH84_16345 PF00717 Peptidase S24-like DEH84_16350 PF18011 C-terminal domain found in long catalases DEH84_16350 PF06628 Catalase-related immune-responsive DEH84_16350 PF00199 Catalase DEH84_16355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_16355 PF00512 His Kinase A (phospho-acceptor) domain DEH84_16360 PF00512 His Kinase A (phospho-acceptor) domain DEH84_16360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_16360 PF00989 PAS fold DEH84_16360 PF16736 Single Cache-like DEH84_16365 PF12728 Helix-turn-helix domain DEH84_16365 PF02661 Fic/DOC family DEH84_16375 PF00753 Metallo-beta-lactamase superfamily DEH84_16385 PF02203 Tar ligand binding domain homologue DEH84_16385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_16385 PF00672 HAMP domain DEH84_16395 PF00392 Bacterial regulatory proteins, gntR family DEH84_16395 PF00155 Aminotransferase class I and II DEH84_16405 PF07690 Major Facilitator Superfamily DEH84_16410 PF00672 HAMP domain DEH84_16410 PF02203 Tar ligand binding domain homologue DEH84_16410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_16415 PF01261 Xylose isomerase-like TIM barrel DEH84_16420 PF12697 Alpha/beta hydrolase family DEH84_16425 PF07152 YaeQ protein DEH84_16430 PF00501 AMP-binding enzyme DEH84_16430 PF13193 AMP-binding enzyme C-terminal domain DEH84_16435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_16435 PF00672 HAMP domain DEH84_16435 PF17200 Single Cache domain 2 DEH84_16440 PF00155 Aminotransferase class I and II DEH84_16445 PF08240 Alcohol dehydrogenase GroES-like domain DEH84_16445 PF00107 Zinc-binding dehydrogenase DEH84_16450 PF00756 Putative esterase DEH84_16455 PF07995 Glucose / Sorbosone dehydrogenase DEH84_16465 PF01613 Flavin reductase like domain DEH84_16470 PF00690 Cation transporter/ATPase, N-terminus DEH84_16470 PF00689 Cation transporting ATPase, C-terminus DEH84_16475 PF00561 alpha/beta hydrolase fold DEH84_16485 PF00072 Response regulator receiver domain DEH84_16485 PF09308 LuxQ, periplasmic DEH84_16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_16485 PF00512 His Kinase A (phospho-acceptor) domain DEH84_16490 PF07722 Peptidase C26 DEH84_16495 PF00392 Bacterial regulatory proteins, gntR family DEH84_16495 PF00155 Aminotransferase class I and II DEH84_16500 PF08402 TOBE domain DEH84_16500 PF00005 ABC transporter DEH84_16510 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16515 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16525 PF00392 Bacterial regulatory proteins, gntR family DEH84_16525 PF00155 Aminotransferase class I and II DEH84_16530 PF00202 Aminotransferase class-III DEH84_16535 PF00171 Aldehyde dehydrogenase family DEH84_16540 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DEH84_16540 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEH84_16545 PF00246 Zinc carboxypeptidase DEH84_16550 PF07499 RuvA, C-terminal domain DEH84_16550 PF01330 RuvA N terminal domain DEH84_16555 PF00196 Bacterial regulatory proteins, luxR family DEH84_16555 PF00072 Response regulator receiver domain DEH84_16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_16560 PF07730 Histidine kinase DEH84_16565 PF02562 PhoH-like protein DEH84_16570 PF02130 Uncharacterized protein family UPF0054 DEH84_16575 PF00990 Diguanylate cyclase, GGDEF domain DEH84_16575 PF17151 Periplasmic sensor domain DEH84_16580 PF02965 Vitamin B12 dependent methionine synthase, activation domain DEH84_16580 PF02310 B12 binding domain DEH84_16580 PF00809 Pterin binding enzyme DEH84_16580 PF02574 Homocysteine S-methyltransferase DEH84_16580 PF02607 B12 binding domain DEH84_16585 PF00520 Ion transport protein DEH84_16585 PF00027 Cyclic nucleotide-binding domain DEH84_16590 PF00563 EAL domain DEH84_16590 PF00990 Diguanylate cyclase, GGDEF domain DEH84_16590 PF03707 Bacterial signalling protein N terminal repeat DEH84_16595 PF00563 EAL domain DEH84_16595 PF03707 Bacterial signalling protein N terminal repeat DEH84_16595 PF00990 Diguanylate cyclase, GGDEF domain DEH84_16600 PF12091 Protein of unknown function (DUF3567) DEH84_16610 PF00106 short chain dehydrogenase DEH84_16640 PF00255 Glutathione peroxidase DEH84_16660 PF02515 CoA-transferase family III DEH84_16665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DEH84_16665 PF00378 Enoyl-CoA hydratase/isomerase DEH84_16665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DEH84_16670 PF02803 Thiolase, C-terminal domain DEH84_16670 PF00108 Thiolase, N-terminal domain DEH84_16675 PF02770 Acyl-CoA dehydrogenase, middle domain DEH84_16675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DEH84_16675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DEH84_16685 PF00999 Sodium/hydrogen exchanger family DEH84_16685 PF02254 TrkA-N domain DEH84_16705 PF06167 Glucose-regulated metallo-peptidase M90 DEH84_16710 PF03707 Bacterial signalling protein N terminal repeat DEH84_16710 PF00990 Diguanylate cyclase, GGDEF domain DEH84_16710 PF00563 EAL domain DEH84_16715 PF00743 Flavin-binding monooxygenase-like DEH84_16735 PF02233 NAD(P) transhydrogenase beta subunit DEH84_16740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch DEH84_16745 PF02261 Aspartate decarboxylase DEH84_16750 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DEH84_16750 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DEH84_16780 PF01266 FAD dependent oxidoreductase DEH84_16780 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DEH84_16785 PF00455 DeoR C terminal sensor domain DEH84_16785 PF08220 DeoR-like helix-turn-helix domain DEH84_16795 PF00106 short chain dehydrogenase DEH84_16795 PF00561 alpha/beta hydrolase fold DEH84_16800 PF00043 Glutathione S-transferase, C-terminal domain DEH84_16800 PF02798 Glutathione S-transferase, N-terminal domain DEH84_16805 PF13603 Leucyl-tRNA synthetase, Domain 2 DEH84_16805 PF00133 tRNA synthetases class I (I, L, M and V) DEH84_16805 PF09334 tRNA synthetases class I (M) DEH84_16805 PF08264 Anticodon-binding domain of tRNA DEH84_16825 PF03707 Bacterial signalling protein N terminal repeat DEH84_16825 PF00563 EAL domain DEH84_16825 PF00990 Diguanylate cyclase, GGDEF domain DEH84_16845 PF00171 Aldehyde dehydrogenase family DEH84_16850 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family DEH84_16855 PF01266 FAD dependent oxidoreductase DEH84_16860 PF00672 HAMP domain DEH84_16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_16860 PF02203 Tar ligand binding domain homologue DEH84_16870 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16875 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16880 PF08402 TOBE domain DEH84_16880 PF00005 ABC transporter DEH84_16885 PF13416 Bacterial extracellular solute-binding protein DEH84_16890 PF00120 Glutamine synthetase, catalytic domain DEH84_16895 PF04717 Type VI secretion system, phage-baseplate injector DEH84_16930 PF03180 NLPA lipoprotein DEH84_16935 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16940 PF00005 ABC transporter DEH84_16940 PF09383 NIL domain DEH84_16950 PF02668 Taurine catabolism dioxygenase TauD, TfdA family DEH84_16960 PF00005 ABC transporter DEH84_16965 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_16970 PF04055 Radical SAM superfamily DEH84_16980 PF03466 LysR substrate binding domain DEH84_16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_16985 PF01176 Translation initiation factor 1A / IF-1 DEH84_17010 PF00072 Response regulator receiver domain DEH84_17015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_17015 PF00072 Response regulator receiver domain DEH84_17015 PF01627 Hpt domain DEH84_17015 PF00512 His Kinase A (phospho-acceptor) domain DEH84_17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_17015 PF00672 HAMP domain DEH84_17020 PF00990 Diguanylate cyclase, GGDEF domain DEH84_17020 PF00072 Response regulator receiver domain DEH84_17025 PF00990 Diguanylate cyclase, GGDEF domain DEH84_17025 PF17158 Membrane-associated sensor, integral membrane domain DEH84_17030 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DEH84_17035 PF02464 Competence-damaged protein DEH84_17040 PF04608 Phosphatidylglycerophosphatase A DEH84_17045 PF00586 AIR synthase related protein, N-terminal domain DEH84_17045 PF02769 AIR synthase related protein, C-terminal domain DEH84_17060 PF03949 Malic enzyme, NAD binding domain DEH84_17060 PF01515 Phosphate acetyl/butaryl transferase DEH84_17060 PF00390 Malic enzyme, N-terminal domain DEH84_17065 PF00545 ribonuclease DEH84_17075 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DEH84_17080 PF14718 Soluble lytic murein transglycosylase L domain DEH84_17080 PF01464 Transglycosylase SLT domain DEH84_17085 PF01812 5-formyltetrahydrofolate cyclo-ligase family DEH84_17100 PF02219 Methylenetetrahydrofolate reductase DEH84_17105 PF01479 S4 domain DEH84_17105 PF01728 FtsJ-like methyltransferase DEH84_17110 PF05221 S-adenosyl-L-homocysteine hydrolase DEH84_17110 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DEH84_17115 PF00990 Diguanylate cyclase, GGDEF domain DEH84_17120 PF08447 PAS fold DEH84_17120 PF00990 Diguanylate cyclase, GGDEF domain DEH84_17120 PF08448 PAS fold DEH84_17120 PF13426 PAS domain DEH84_17120 PF00563 EAL domain DEH84_17120 PF05231 MASE1 DEH84_17125 PF16658 Class II release factor RF3, C-terminal domain DEH84_17125 PF00009 Elongation factor Tu GTP binding domain DEH84_17125 PF03144 Elongation factor Tu domain 2 DEH84_17140 PF11871 Domain of unknown function (DUF3391) DEH84_17140 PF01966 HD domain DEH84_17145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_17145 PF02203 Tar ligand binding domain homologue DEH84_17145 PF00672 HAMP domain DEH84_17150 PF00438 S-adenosylmethionine synthetase, N-terminal domain DEH84_17150 PF02773 S-adenosylmethionine synthetase, C-terminal domain DEH84_17150 PF02772 S-adenosylmethionine synthetase, central domain DEH84_17155 PF03279 Bacterial lipid A biosynthesis acyltransferase DEH84_17160 PF03279 Bacterial lipid A biosynthesis acyltransferase DEH84_17165 PF02203 Tar ligand binding domain homologue DEH84_17165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_17165 PF00672 HAMP domain DEH84_17170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DEH84_17170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DEH84_17170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DEH84_17175 PF01678 Diaminopimelate epimerase DEH84_17185 PF00589 Phage integrase family DEH84_17185 PF02899 Phage integrase, N-terminal SAM-like domain DEH84_17190 PF17785 PUA-like domain DEH84_17190 PF10672 S-adenosylmethionine-dependent methyltransferase DEH84_17195 PF12833 Helix-turn-helix domain DEH84_17195 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEH84_17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_17205 PF00672 HAMP domain DEH84_17205 PF01627 Hpt domain DEH84_17205 PF00512 His Kinase A (phospho-acceptor) domain DEH84_17205 PF00072 Response regulator receiver domain DEH84_17205 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_17210 PF04264 YceI-like domain DEH84_17225 PF00990 Diguanylate cyclase, GGDEF domain DEH84_17225 PF05230 MASE2 domain DEH84_17230 PF00990 Diguanylate cyclase, GGDEF domain DEH84_17230 PF08448 PAS fold DEH84_17235 PF00989 PAS fold DEH84_17235 PF13188 PAS domain DEH84_17235 PF00512 His Kinase A (phospho-acceptor) domain DEH84_17235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_17240 PF01613 Flavin reductase like domain DEH84_17250 PF17762 HTH domain found in ParB protein DEH84_17250 PF02195 ParB-like nuclease domain DEH84_17260 PF13614 AAA domain DEH84_17275 PF02527 rRNA small subunit methyltransferase G DEH84_17280 PF01134 Glucose inhibited division protein A DEH84_17280 PF13932 GidA associated domain DEH84_17295 PF04116 Fatty acid hydroxylase superfamily DEH84_17310 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DEH84_17320 PF00106 short chain dehydrogenase DEH84_17335 PF00571 CBS domain DEH84_17335 PF01380 SIS domain DEH84_17340 PF02254 TrkA-N domain DEH84_17340 PF00999 Sodium/hydrogen exchanger family DEH84_17340 PF02080 TrkA-C domain DEH84_17345 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_17345 PF00072 Response regulator receiver domain DEH84_17345 PF01627 Hpt domain DEH84_17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_17345 PF00512 His Kinase A (phospho-acceptor) domain DEH84_17345 PF00672 HAMP domain DEH84_17350 PF00072 Response regulator receiver domain DEH84_17360 PF10396 GTP-binding protein TrmE N-terminus DEH84_17360 PF12631 MnmE helical domain DEH84_17360 PF01926 50S ribosome-binding GTPase DEH84_17370 PF14849 YidC periplasmic domain DEH84_17370 PF02096 60Kd inner membrane protein DEH84_17375 PF01809 Putative membrane protein insertion efficiency factor DEH84_17385 PF00468 Ribosomal protein L34 DEH84_17390 PF08669 Glycine cleavage T-protein C-terminal barrel domain DEH84_17390 PF01571 Aminomethyltransferase folate-binding domain DEH84_17410 PF01590 GAF domain DEH84_17410 PF00158 Sigma-54 interaction domain DEH84_17410 PF02954 Bacterial regulatory protein, Fis family DEH84_17415 PF00909 Ammonium Transporter Family DEH84_17425 PF01842 ACT domain DEH84_17425 PF00551 Formyl transferase DEH84_17430 PF01571 Aminomethyltransferase folate-binding domain DEH84_17430 PF08669 Glycine cleavage T-protein C-terminal barrel domain DEH84_17445 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DEH84_17445 PF07730 Histidine kinase DEH84_17445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_17445 PF00672 HAMP domain DEH84_17450 PF00072 Response regulator receiver domain DEH84_17450 PF00196 Bacterial regulatory proteins, luxR family DEH84_17455 PF00893 Small Multidrug Resistance protein DEH84_17460 PF08544 GHMP kinases C terminal DEH84_17460 PF00288 GHMP kinases N terminal domain DEH84_17465 PF13580 SIS domain DEH84_17470 PF00483 Nucleotidyl transferase DEH84_17515 PF02384 N-6 DNA Methylase DEH84_17535 PF13495 Phage integrase, N-terminal SAM-like domain DEH84_17535 PF00589 Phage integrase family DEH84_17545 PF06965 Na+/H+ antiporter 1 DEH84_17555 PF00893 Small Multidrug Resistance protein DEH84_17605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DEH84_17610 PF01799 [2Fe-2S] binding domain DEH84_17610 PF00111 2Fe-2S iron-sulfur cluster binding domain DEH84_17615 PF06719 AraC-type transcriptional regulator N-terminus DEH84_17615 PF12833 Helix-turn-helix domain DEH84_17620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DEH84_17620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DEH84_17635 PF01548 Transposase DEH84_17635 PF02371 Transposase IS116/IS110/IS902 family DEH84_17645 PF02371 Transposase IS116/IS110/IS902 family DEH84_17645 PF01548 Transposase DEH84_17650 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system DEH84_17655 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system DEH84_17675 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) DEH84_17675 PF00072 Response regulator receiver domain DEH84_17675 PF01627 Hpt domain DEH84_17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_17675 PF00512 His Kinase A (phospho-acceptor) domain DEH84_17675 PF00672 HAMP domain DEH84_17680 PF00072 Response regulator receiver domain DEH84_17705 PF02374 Anion-transporting ATPase DEH84_17710 PF03358 NADPH-dependent FMN reductase DEH84_17715 PF03960 ArsC family DEH84_17720 PF01270 Glycosyl hydrolases family 8 DEH84_17735 PF03552 Cellulose synthase DEH84_17735 PF07238 PilZ domain DEH84_17735 PF00535 Glycosyl transferase family 2 DEH84_17740 PF00141 Peroxidase DEH84_17750 PF03459 TOBE domain DEH84_17750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_17755 PF00384 Molybdopterin oxidoreductase DEH84_17760 PF02634 FdhD/NarQ family DEH84_17780 PF01548 Transposase DEH84_17780 PF02371 Transposase IS116/IS110/IS902 family DEH84_17795 PF00892 EamA-like transporter family DEH84_17800 PF03352 Methyladenine glycosylase DEH84_17815 PF00128 Alpha amylase, catalytic domain DEH84_17815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DEH84_17825 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DEH84_17830 PF01176 Translation initiation factor 1A / IF-1 DEH84_17840 PF00072 Response regulator receiver domain DEH84_17840 PF01339 CheB methylesterase DEH84_17845 PF06965 Na+/H+ antiporter 1 DEH84_17850 PF03009 Glycerophosphoryl diester phosphodiesterase family DEH84_17855 PF07963 Prokaryotic N-terminal methylation motif DEH84_17855 PF08334 Type II secretion system (T2SS), protein G DEH84_17860 PF00482 Type II secretion system (T2SS), protein F DEH84_17865 PF00437 Type II/IV secretion system protein DEH84_17890 PF11741 AMIN domain DEH84_17890 PF00263 Bacterial type II and III secretion system protein DEH84_17890 PF03958 Bacterial type II/III secretion system short domain DEH84_17890 PF07660 Secretin and TonB N terminus short domain DEH84_17895 PF07963 Prokaryotic N-terminal methylation motif DEH84_17895 PF08334 Type II secretion system (T2SS), protein G DEH84_17900 PF08334 Type II secretion system (T2SS), protein G DEH84_17900 PF07963 Prokaryotic N-terminal methylation motif DEH84_17910 PF03472 Autoinducer binding domain DEH84_17910 PF00196 Bacterial regulatory proteins, luxR family DEH84_17940 PF01618 MotA/TolQ/ExbB proton channel family DEH84_17945 PF02472 Biopolymer transport protein ExbD/TolR DEH84_17950 PF02472 Biopolymer transport protein ExbD/TolR DEH84_17975 PF01594 AI-2E family transporter DEH84_17980 PF00816 H-NS histone family DEH84_17995 PF00743 Flavin-binding monooxygenase-like DEH84_18000 PF02896 PEP-utilising enzyme, TIM barrel domain DEH84_18000 PF00391 PEP-utilising enzyme, mobile domain DEH84_18000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DEH84_18015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_18015 PF02203 Tar ligand binding domain homologue DEH84_18015 PF00672 HAMP domain DEH84_18020 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DEH84_18020 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DEH84_18025 PF00732 GMC oxidoreductase DEH84_18025 PF05199 GMC oxidoreductase DEH84_18040 PF07729 FCD domain DEH84_18040 PF00392 Bacterial regulatory proteins, gntR family DEH84_18050 PF03591 AzlC protein DEH84_18055 PF03466 LysR substrate binding domain DEH84_18055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_18060 PF02754 Cysteine-rich domain DEH84_18065 PF02589 LUD domain DEH84_18070 PF13183 4Fe-4S dicluster domain DEH84_18070 PF02589 LUD domain DEH84_18070 PF11870 Domain of unknown function (DUF3390) DEH84_18080 PF02652 L-lactate permease DEH84_18105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_18105 PF07730 Histidine kinase DEH84_18105 PF05231 MASE1 DEH84_18120 PF01011 PQQ enzyme repeat DEH84_18120 PF13360 PQQ-like domain DEH84_18125 PF00196 Bacterial regulatory proteins, luxR family DEH84_18125 PF00072 Response regulator receiver domain DEH84_18135 PF04205 FMN-binding domain DEH84_18135 PF12801 4Fe-4S binding domain DEH84_18150 PF05175 Methyltransferase small domain DEH84_18155 PF01865 Protein of unknown function DUF47 DEH84_18160 PF01384 Phosphate transporter family DEH84_18175 PF03060 Nitronate monooxygenase DEH84_18180 PF01266 FAD dependent oxidoreductase DEH84_18180 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DEH84_18185 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DEH84_18185 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DEH84_18190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DEH84_18195 PF00072 Response regulator receiver domain DEH84_18200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_18200 PF00512 His Kinase A (phospho-acceptor) domain DEH84_18200 PF01627 Hpt domain DEH84_18200 PF00072 Response regulator receiver domain DEH84_18205 PF00563 EAL domain DEH84_18205 PF00990 Diguanylate cyclase, GGDEF domain DEH84_18205 PF03707 Bacterial signalling protein N terminal repeat DEH84_18215 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term DEH84_18215 PF00672 HAMP domain DEH84_18215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DEH84_18215 PF07730 Histidine kinase DEH84_18220 PF04055 Radical SAM superfamily DEH84_18220 PF06463 Molybdenum Cofactor Synthesis C DEH84_18225 PF00196 Bacterial regulatory proteins, luxR family DEH84_18225 PF00072 Response regulator receiver domain DEH84_18230 PF07690 Major Facilitator Superfamily DEH84_18235 PF07690 Major Facilitator Superfamily DEH84_18240 PF00384 Molybdopterin oxidoreductase DEH84_18240 PF14710 Respiratory nitrate reductase alpha N-terminal DEH84_18240 PF01568 Molydopterin dinucleotide binding domain DEH84_18245 PF13247 4Fe-4S dicluster domain DEH84_18245 PF14711 Respiratory nitrate reductase beta C-terminal DEH84_18250 PF02613 Nitrate reductase delta subunit DEH84_18255 PF02665 Nitrate reductase gamma subunit DEH84_18265 PF00484 Carbonic anhydrase DEH84_18295 PF13657 HipA N-terminal domain DEH84_18295 PF07804 HipA-like C-terminal domain DEH84_18310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DEH84_18320 PF01451 Low molecular weight phosphotyrosine protein phosphatase DEH84_18325 PF01758 Sodium Bile acid symporter family DEH84_18350 PF03449 Transcription elongation factor, N-terminal DEH84_18350 PF01272 Transcription elongation factor, GreA/GreB, C-term DEH84_18355 PF05193 Peptidase M16 inactive domain DEH84_18355 PF00675 Insulinase (Peptidase family M16) DEH84_18370 PF02954 Bacterial regulatory protein, Fis family DEH84_18370 PF00158 Sigma-54 interaction domain DEH84_18375 PF01814 Hemerythrin HHE cation binding domain DEH84_18375 PF04405 Domain of Unknown function (DUF542) DEH84_18385 PF00034 Cytochrome c DEH84_18390 PF00115 Cytochrome C and Quinol oxidase polypeptide I DEH84_18395 PF07728 AAA domain (dynein-related subfamily) DEH84_18395 PF08406 CbbQ/NirQ/NorQ C-terminal DEH84_18400 PF00092 von Willebrand factor type A domain DEH84_18405 PF07690 Major Facilitator Superfamily DEH84_18415 PF12833 Helix-turn-helix domain DEH84_18415 PF02311 AraC-like ligand binding domain DEH84_18420 PF00857 Isochorismatase family DEH84_18445 PF00593 TonB dependent receptor DEH84_18445 PF07715 TonB-dependent Receptor Plug Domain DEH84_18455 PF01497 Periplasmic binding protein DEH84_18460 PF01032 FecCD transport family DEH84_18465 PF00005 ABC transporter DEH84_18470 PF01051 Initiator Replication protein DEH84_18475 PF13614 AAA domain DEH84_18490 PF00199 Catalase DEH84_18490 PF18011 C-terminal domain found in long catalases DEH84_18490 PF06628 Catalase-related immune-responsive DEH84_18495 PF07690 Major Facilitator Superfamily DEH84_18500 PF00392 Bacterial regulatory proteins, gntR family DEH84_18505 PF00155 Aminotransferase class I and II DEH84_18505 PF00392 Bacterial regulatory proteins, gntR family DEH84_18515 PF00795 Carbon-nitrogen hydrolase DEH84_18530 PF02769 AIR synthase related protein, C-terminal domain DEH84_18530 PF00586 AIR synthase related protein, N-terminal domain DEH84_18535 PF13439 Glycosyltransferase Family 4 DEH84_18535 PF00534 Glycosyl transferases group 1 DEH84_18555 PF12801 4Fe-4S binding domain DEH84_18555 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase DEH84_18555 PF13746 4Fe-4S dicluster domain DEH84_18565 PF00171 Aldehyde dehydrogenase family DEH84_18570 PF07729 FCD domain DEH84_18570 PF00392 Bacterial regulatory proteins, gntR family DEH84_18575 PF00267 Gram-negative porin DEH84_18580 PF00005 ABC transporter DEH84_18580 PF08402 TOBE domain DEH84_18585 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_18590 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_18605 PF00171 Aldehyde dehydrogenase family DEH84_18610 PF00296 Luciferase-like monooxygenase DEH84_18615 PF01613 Flavin reductase like domain DEH84_18620 PF12697 Alpha/beta hydrolase family DEH84_18630 PF01645 Conserved region in glutamate synthase DEH84_18635 PF01493 GXGXG motif DEH84_18645 PF00120 Glutamine synthetase, catalytic domain DEH84_18660 PF16350 FAD dependent oxidoreductase central domain DEH84_18660 PF01266 FAD dependent oxidoreductase DEH84_18660 PF08669 Glycine cleavage T-protein C-terminal barrel domain DEH84_18660 PF01571 Aminomethyltransferase folate-binding domain DEH84_18665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DEH84_18665 PF03466 LysR substrate binding domain DEH84_18675 PF00543 Nitrogen regulatory protein P-II DEH84_18680 PF00909 Ammonium Transporter Family DEH84_18700 PF00528 Binding-protein-dependent transport system inner membrane component DEH84_18705 PF09084 NMT1/THI5 like DEH84_18715 PF02910 Fumarate reductase flavoprotein C-term DEH84_18715 PF00890 FAD binding domain DEH84_18740 PF07690 Major Facilitator Superfamily DEH84_18750 PF00440 Bacterial regulatory proteins, tetR family DEH84_18750 PF13305 Tetracyclin repressor-like, C-terminal domain DEH84_18755 PF02321 Outer membrane efflux protein DEH84_18765 PF00873 AcrB/AcrD/AcrF family DEH84_18770 PF01142 tRNA pseudouridine synthase D (TruD) DEH84_18775 PF00990 Diguanylate cyclase, GGDEF domain DEH84_18775 PF00072 Response regulator receiver domain DEH84_18780 PF13193 AMP-binding enzyme C-terminal domain DEH84_18780 PF00501 AMP-binding enzyme DEH84_18785 PF12146 Serine aminopeptidase, S33 DEH84_18790 PF00743 Flavin-binding monooxygenase-like DEH84_18795 PF12833 Helix-turn-helix domain DEH84_18795 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term DEH84_18800 PF01425 Amidase DEH84_18835 PF00117 Glutamine amidotransferase class-I DEH84_18840 PF01012 Electron transfer flavoprotein domain DEH84_18845 PF00766 Electron transfer flavoprotein FAD-binding domain DEH84_18845 PF01012 Electron transfer flavoprotein domain DEH84_18855 PF00593 TonB dependent receptor DEH84_18855 PF07715 TonB-dependent Receptor Plug Domain DEH84_18865 PF00324 Amino acid permease DEH84_18875 PF00672 HAMP domain DEH84_18875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DEH84_18875 PF02203 Tar ligand binding domain homologue DEH84_18880 PF00403 Heavy-metal-associated domain DEH84_18890 PF09278 MerR, DNA binding DEH84_18890 PF00376 MerR family regulatory protein DEH84_18895 PF00403 Heavy-metal-associated domain DEH84_18900 PF12833 Helix-turn-helix domain DEH84_18900 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DEH84_18900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DEH84_18900 PF02805 Metal binding domain of Ada DEH84_18910 PF04715 Anthranilate synthase component I, N terminal region DEH84_18910 PF00425 chorismate binding enzyme DEH84_18925 PF02741 FTR, proximal lobe DEH84_18925 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase DEH84_18930 PF07969 Amidohydrolase family DEH84_18990 PF08443 RimK-like ATP-grasp domain DEH84_18990 PF18030 RimK PreATP-grasp domain DEH84_18995 PF02289 Cyclohydrolase (MCH) DEH84_19000 PF02142 MGS-like domain DEH84_19000 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DEH84_19000 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DEH84_19005 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal