locus-tag class description BXU06_00005 PF00308 Bacterial dnaA protein BXU06_00005 PF08299 Bacterial dnaA protein helix-turn-helix BXU06_00005 PF11638 DnaA N-terminal domain BXU06_00010 PF02767 DNA polymerase III beta subunit, central domain BXU06_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BXU06_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BXU06_00015 PF00204 DNA gyrase B BXU06_00015 PF00986 DNA gyrase B subunit, carboxyl terminus BXU06_00015 PF01751 Toprim domain BXU06_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_00015 PF18053 DNA gyrase B subunit insert domain BXU06_00020 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BXU06_00035 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BXU06_00035 PF08548 Peptidase M10 serralysin C terminal BXU06_00040 PF00534 Glycosyl transferases group 1 BXU06_00040 PF13439 Glycosyltransferase Family 4 BXU06_00050 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BXU06_00060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BXU06_00060 PF03900 Porphobilinogen deaminase, C-terminal domain BXU06_00065 PF00311 Phosphoenolpyruvate carboxylase BXU06_00075 PF00899 ThiF family BXU06_00080 PF00158 Sigma-54 interaction domain BXU06_00080 PF00072 Response regulator receiver domain BXU06_00080 PF02954 Bacterial regulatory protein, Fis family BXU06_00085 PF00512 His Kinase A (phospho-acceptor) domain BXU06_00085 PF00672 HAMP domain BXU06_00085 PF00989 PAS fold BXU06_00085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_00095 PF01189 16S rRNA methyltransferase RsmB/F BXU06_00095 PF01029 NusB family BXU06_00100 PF08447 PAS fold BXU06_00100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_00100 PF13426 PAS domain BXU06_00105 PF00753 Metallo-beta-lactamase superfamily BXU06_00110 PF17200 Single Cache domain 2 BXU06_00110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_00110 PF00672 HAMP domain BXU06_00115 PF00672 HAMP domain BXU06_00115 PF17200 Single Cache domain 2 BXU06_00115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_00120 PF03476 MOSC N-terminal beta barrel domain BXU06_00120 PF03473 MOSC domain BXU06_00120 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_00125 PF13426 PAS domain BXU06_00125 PF08447 PAS fold BXU06_00125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_00130 PF03976 Polyphosphate kinase 2 (PPK2) BXU06_00135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_00135 PF00672 HAMP domain BXU06_00150 PF00005 ABC transporter BXU06_00155 PF01061 ABC-2 type transporter BXU06_00165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BXU06_00170 PF04264 YceI-like domain BXU06_00175 PF04264 YceI-like domain BXU06_00180 PF01292 Prokaryotic cytochrome b561 BXU06_00185 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU06_00190 PF03466 LysR substrate binding domain BXU06_00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_00195 PF00043 Glutathione S-transferase, C-terminal domain BXU06_00195 PF02798 Glutathione S-transferase, N-terminal domain BXU06_00200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BXU06_00210 PF03480 Bacterial extracellular solute-binding protein, family 7 BXU06_00215 PF00155 Aminotransferase class I and II BXU06_00225 PF17831 Pyruvate dehydrogenase E1 component middle domain BXU06_00225 PF00456 Transketolase, thiamine diphosphate binding domain BXU06_00230 PF00364 Biotin-requiring enzyme BXU06_00230 PF02817 e3 binding domain BXU06_00230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BXU06_00235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BXU06_00235 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_00295 PF00069 Protein kinase domain BXU06_00295 PF03793 PASTA domain BXU06_00305 PF03658 RnfH family Ubiquitin BXU06_00310 PF02508 Rnf-Nqr subunit, membrane protein BXU06_00315 PF04205 FMN-binding domain BXU06_00320 PF03116 NQR2, RnfD, RnfE family BXU06_00325 PF13237 4Fe-4S dicluster domain BXU06_00325 PF10531 SLBB domain BXU06_00325 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BXU06_00325 PF13375 RnfC Barrel sandwich hybrid domain BXU06_00330 PF04060 Putative Fe-S cluster BXU06_00335 PF02508 Rnf-Nqr subunit, membrane protein BXU06_00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_00340 PF00989 PAS fold BXU06_00345 PF00158 Sigma-54 interaction domain BXU06_00345 PF13185 GAF domain BXU06_00345 PF02954 Bacterial regulatory protein, Fis family BXU06_00350 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_00355 PF00005 ABC transporter BXU06_00355 PF03459 TOBE domain BXU06_00365 PF02374 Anion-transporting ATPase BXU06_00370 PF06953 Arsenical resistance operon trans-acting repressor ArsD BXU06_00395 PF02470 MlaD protein BXU06_00400 PF02405 Permease MlaE BXU06_00405 PF00005 ABC transporter BXU06_00410 PF03958 Bacterial type II/III secretion system short domain BXU06_00410 PF00263 Bacterial type II and III secretion system protein BXU06_00420 PF00437 Type II/IV secretion system protein BXU06_00425 PF00482 Type II secretion system (T2SS), protein F BXU06_00440 PF07152 YaeQ protein BXU06_00450 PF00202 Aminotransferase class-III BXU06_00455 PF00696 Amino acid kinase family BXU06_00455 PF01472 PUA domain BXU06_00475 PF01434 Peptidase family M41 BXU06_00475 PF17862 AAA+ lid domain BXU06_00475 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_00540 PF00501 AMP-binding enzyme BXU06_00540 PF14535 AMP-binding enzyme C-terminal domain BXU06_00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_00545 PF03466 LysR substrate binding domain BXU06_00565 PF00990 Diguanylate cyclase, GGDEF domain BXU06_00565 PF03707 Bacterial signalling protein N terminal repeat BXU06_00565 PF00563 EAL domain BXU06_00575 PF12323 Helix-turn-helix domain BXU06_00575 PF07282 Putative transposase DNA-binding domain BXU06_00575 PF01385 Probable transposase BXU06_00580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BXU06_00585 PF00005 ABC transporter BXU06_00590 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_00595 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BXU06_00600 PF00893 Small Multidrug Resistance protein BXU06_00605 PF02535 ZIP Zinc transporter BXU06_00610 PF02075 Crossover junction endodeoxyribonuclease RuvC BXU06_00615 PF00483 Nucleotidyl transferase BXU06_00620 PF01636 Phosphotransferase enzyme family BXU06_00625 PF04453 LPS transport system D BXU06_00630 PF09312 SurA N-terminal domain BXU06_00635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BXU06_00660 PF00581 Rhodanese-like domain BXU06_00665 PF03707 Bacterial signalling protein N terminal repeat BXU06_00665 PF00563 EAL domain BXU06_00665 PF00990 Diguanylate cyclase, GGDEF domain BXU06_00675 PF01022 Bacterial regulatory protein, arsR family BXU06_00680 PF01451 Low molecular weight phosphotyrosine protein phosphatase BXU06_00685 PF01451 Low molecular weight phosphotyrosine protein phosphatase BXU06_00690 PF01758 Sodium Bile acid symporter family BXU06_00710 PF02798 Glutathione S-transferase, N-terminal domain BXU06_00715 PF03466 LysR substrate binding domain BXU06_00715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_00725 PF01609 Transposase DDE domain BXU06_00725 PF05598 Transposase domain (DUF772) BXU06_00740 PF07499 RuvA, C-terminal domain BXU06_00740 PF01330 RuvA N terminal domain BXU06_00745 PF01569 PAP2 superfamily BXU06_00750 PF05491 RuvB C-terminal winged helix domain BXU06_00750 PF05496 Holliday junction DNA helicase RuvB P-loop domain BXU06_00750 PF17864 RuvB AAA lid domain BXU06_00760 PF00580 UvrD/REP helicase N-terminal domain BXU06_00760 PF13361 UvrD-like helicase C-terminal domain BXU06_00765 PF00072 Response regulator receiver domain BXU06_00770 PF04325 Protein of unknown function (DUF465) BXU06_00775 PF01734 Patatin-like phospholipase BXU06_00780 PF08241 Methyltransferase domain BXU06_00785 PF00561 alpha/beta hydrolase fold BXU06_00790 PF01209 ubiE/COQ5 methyltransferase family BXU06_00800 PF05598 Transposase domain (DUF772) BXU06_00800 PF01609 Transposase DDE domain BXU06_00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_00810 PF03466 LysR substrate binding domain BXU06_00815 PF00155 Aminotransferase class I and II BXU06_00820 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_00820 PF14602 Hexapeptide repeat of succinyl-transferase BXU06_00820 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BXU06_00830 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_00830 PF01434 Peptidase family M41 BXU06_00830 PF17862 AAA+ lid domain BXU06_00830 PF06480 FtsH Extracellular BXU06_00870 PF04545 Sigma-70, region 4 BXU06_00870 PF00140 Sigma-70 factor, region 1.2 BXU06_00870 PF04542 Sigma-70 region 2 BXU06_00875 PF18075 FtsX extracellular domain BXU06_00880 PF00005 ABC transporter BXU06_00885 PF00448 SRP54-type protein, GTPase domain BXU06_00885 PF02881 SRP54-type protein, helical bundle domain BXU06_00890 PF05193 Peptidase M16 inactive domain BXU06_00890 PF00675 Insulinase (Peptidase family M16) BXU06_00895 PF05193 Peptidase M16 inactive domain BXU06_00905 PF00037 4Fe-4S binding domain BXU06_00925 PF00009 Elongation factor Tu GTP binding domain BXU06_00925 PF03143 Elongation factor Tu C-terminal domain BXU06_00925 PF03144 Elongation factor Tu domain 2 BXU06_00940 PF00467 KOW motif BXU06_00940 PF02357 Transcription termination factor nusG BXU06_00945 PF00298 Ribosomal protein L11, RNA binding domain BXU06_00945 PF03946 Ribosomal protein L11, N-terminal domain BXU06_00950 PF00687 Ribosomal protein L1p/L10e family BXU06_00955 PF00466 Ribosomal protein L10 BXU06_00960 PF16320 Ribosomal protein L7/L12 dimerisation domain BXU06_00960 PF00542 Ribosomal protein L7/L12 C-terminal domain BXU06_00965 PF04560 RNA polymerase Rpb2, domain 7 BXU06_00965 PF04563 RNA polymerase beta subunit BXU06_00965 PF04561 RNA polymerase Rpb2, domain 2 BXU06_00965 PF00562 RNA polymerase Rpb2, domain 6 BXU06_00965 PF10385 RNA polymerase beta subunit external 1 domain BXU06_00965 PF04565 RNA polymerase Rpb2, domain 3 BXU06_00970 PF04983 RNA polymerase Rpb1, domain 3 BXU06_00970 PF05000 RNA polymerase Rpb1, domain 4 BXU06_00970 PF00623 RNA polymerase Rpb1, domain 2 BXU06_00970 PF04997 RNA polymerase Rpb1, domain 1 BXU06_00970 PF04998 RNA polymerase Rpb1, domain 5 BXU06_00975 PF00164 Ribosomal protein S12/S23 BXU06_00980 PF00177 Ribosomal protein S7p/S5e BXU06_00985 PF03764 Elongation factor G, domain IV BXU06_00985 PF03144 Elongation factor Tu domain 2 BXU06_00985 PF00009 Elongation factor Tu GTP binding domain BXU06_00985 PF14492 Elongation Factor G, domain II BXU06_00985 PF00679 Elongation factor G C-terminus BXU06_00990 PF03143 Elongation factor Tu C-terminal domain BXU06_00990 PF00009 Elongation factor Tu GTP binding domain BXU06_00990 PF03144 Elongation factor Tu domain 2 BXU06_00995 PF00338 Ribosomal protein S10p/S20e BXU06_01000 PF00297 Ribosomal protein L3 BXU06_01005 PF00573 Ribosomal protein L4/L1 family BXU06_01010 PF00276 Ribosomal protein L23 BXU06_01015 PF03947 Ribosomal Proteins L2, C-terminal domain BXU06_01015 PF00181 Ribosomal Proteins L2, RNA binding domain BXU06_01020 PF00203 Ribosomal protein S19 BXU06_01025 PF00237 Ribosomal protein L22p/L17e BXU06_01030 PF00189 Ribosomal protein S3, C-terminal domain BXU06_01030 PF07650 KH domain BXU06_01035 PF00252 Ribosomal protein L16p/L10e BXU06_01040 PF00831 Ribosomal L29 protein BXU06_01045 PF00366 Ribosomal protein S17 BXU06_01050 PF00238 Ribosomal protein L14p/L23e BXU06_01055 PF00467 KOW motif BXU06_01055 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BXU06_01060 PF00673 ribosomal L5P family C-terminus BXU06_01060 PF00281 Ribosomal protein L5 BXU06_01065 PF00253 Ribosomal protein S14p/S29e BXU06_01070 PF00410 Ribosomal protein S8 BXU06_01075 PF00347 Ribosomal protein L6 BXU06_01080 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BXU06_01085 PF03719 Ribosomal protein S5, C-terminal domain BXU06_01085 PF00333 Ribosomal protein S5, N-terminal domain BXU06_01090 PF00327 Ribosomal protein L30p/L7e BXU06_01095 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BXU06_01100 PF00344 SecY translocase BXU06_01105 PF01176 Translation initiation factor 1A / IF-1 BXU06_01110 PF00444 Ribosomal protein L36 BXU06_01115 PF00416 Ribosomal protein S13/S18 BXU06_01120 PF00411 Ribosomal protein S11 BXU06_01125 PF01479 S4 domain BXU06_01125 PF00163 Ribosomal protein S4/S9 N-terminal domain BXU06_01130 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BXU06_01130 PF01000 RNA polymerase Rpb3/RpoA insert domain BXU06_01130 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BXU06_01135 PF01196 Ribosomal protein L17 BXU06_01140 PF01464 Transglycosylase SLT domain BXU06_01140 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_01145 PF00563 EAL domain BXU06_01145 PF00990 Diguanylate cyclase, GGDEF domain BXU06_01145 PF13188 PAS domain BXU06_01145 PF03707 Bacterial signalling protein N terminal repeat BXU06_01155 PF00795 Carbon-nitrogen hydrolase BXU06_01160 PF03471 Transporter associated domain BXU06_01160 PF00571 CBS domain BXU06_01165 PF02130 Uncharacterized protein family UPF0054 BXU06_01170 PF02562 PhoH-like protein BXU06_01175 PF04055 Radical SAM superfamily BXU06_01175 PF01938 TRAM domain BXU06_01175 PF00919 Uncharacterized protein family UPF0004 BXU06_01210 PF00171 Aldehyde dehydrogenase family BXU06_01225 PF00072 Response regulator receiver domain BXU06_01225 PF02954 Bacterial regulatory protein, Fis family BXU06_01230 PF02463 RecF/RecN/SMC N terminal domain BXU06_01240 PF00501 AMP-binding enzyme BXU06_01240 PF13193 AMP-binding enzyme C-terminal domain BXU06_01245 PF12806 Acetyl-CoA dehydrogenase C-terminal like BXU06_01245 PF02770 Acyl-CoA dehydrogenase, middle domain BXU06_01245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_01245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU06_01255 PF04341 Protein of unknown function, DUF485 BXU06_01260 PF00474 Sodium:solute symporter family BXU06_01270 PF02463 RecF/RecN/SMC N terminal domain BXU06_01290 PF01612 3'-5' exonuclease BXU06_01290 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BXU06_01290 PF00476 DNA polymerase family A BXU06_01290 PF01367 5'-3' exonuclease, C-terminal SAM fold BXU06_01295 PF03641 Possible lysine decarboxylase BXU06_01305 PF01636 Phosphotransferase enzyme family BXU06_01315 PF01381 Helix-turn-helix BXU06_01325 PF01208 Uroporphyrinogen decarboxylase (URO-D) BXU06_01335 PF00672 HAMP domain BXU06_01335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_01350 PF00561 alpha/beta hydrolase fold BXU06_01355 PF07021 Methionine biosynthesis protein MetW BXU06_01355 PF00561 alpha/beta hydrolase fold BXU06_01360 PF03475 3-alpha domain BXU06_01360 PF03473 MOSC domain BXU06_01365 PF00117 Glutamine amidotransferase class-I BXU06_01365 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BXU06_01370 PF01381 Helix-turn-helix BXU06_01370 PF08671 Anti-repressor SinI BXU06_01375 PF00488 MutS domain V BXU06_01375 PF05190 MutS family domain IV BXU06_01375 PF05192 MutS domain III BXU06_01375 PF05188 MutS domain II BXU06_01375 PF01624 MutS domain I BXU06_01390 PF00486 Transcriptional regulatory protein, C terminal BXU06_01390 PF00072 Response regulator receiver domain BXU06_01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_01395 PF13426 PAS domain BXU06_01395 PF00072 Response regulator receiver domain BXU06_01400 PF12729 Four helix bundle sensory module for signal transduction BXU06_01400 PF00672 HAMP domain BXU06_01400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_01405 PF12708 Pectate lyase superfamily protein BXU06_01405 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BXU06_01405 PF13229 Right handed beta helix region BXU06_01420 PF13229 Right handed beta helix region BXU06_01420 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BXU06_01420 PF12708 Pectate lyase superfamily protein BXU06_01425 PF02397 Bacterial sugar transferase BXU06_01430 PF10672 S-adenosylmethionine-dependent methyltransferase BXU06_01440 PF03466 LysR substrate binding domain BXU06_01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_01450 PF13419 Haloacid dehalogenase-like hydrolase BXU06_01455 PF01361 Tautomerase enzyme BXU06_01460 PF03009 Glycerophosphoryl diester phosphodiesterase family BXU06_01465 PF00175 Oxidoreductase NAD-binding domain BXU06_01465 PF00970 Oxidoreductase FAD-binding domain BXU06_01465 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_01475 PF00171 Aldehyde dehydrogenase family BXU06_01480 PF00378 Enoyl-CoA hydratase/isomerase BXU06_01485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BXU06_01485 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BXU06_01485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BXU06_01490 PF03061 Thioesterase superfamily BXU06_01500 PF00108 Thiolase, N-terminal domain BXU06_01500 PF02803 Thiolase, C-terminal domain BXU06_01510 PF00378 Enoyl-CoA hydratase/isomerase BXU06_01515 PF00378 Enoyl-CoA hydratase/isomerase BXU06_01520 PF00267 Gram-negative porin BXU06_01525 PF08447 PAS fold BXU06_01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_01530 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU06_01535 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU06_01540 PF00171 Aldehyde dehydrogenase family BXU06_01545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU06_01550 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU06_01555 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase BXU06_01560 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU06_01565 PF03328 HpcH/HpaI aldolase/citrate lyase family BXU06_01570 PF00171 Aldehyde dehydrogenase family BXU06_01575 PF07690 Major Facilitator Superfamily BXU06_01580 PF12833 Helix-turn-helix domain BXU06_01580 PF14525 AraC-binding-like domain BXU06_01590 PF00596 Class II Aldolase and Adducin N-terminal domain BXU06_01595 PF07690 Major Facilitator Superfamily BXU06_01600 PF01042 Endoribonuclease L-PSP BXU06_01605 PF04247 Invasion gene expression up-regulator, SirB BXU06_01620 PF02811 PHP domain BXU06_01625 PF01300 Telomere recombination BXU06_01630 PF02163 Peptidase family M50 BXU06_01635 PF00579 tRNA synthetases class I (W and Y) BXU06_01640 PF02616 Segregation and condensation protein ScpA BXU06_01650 PF12843 Putative quorum-sensing-regulated virulence factor BXU06_01655 PF01926 50S ribosome-binding GTPase BXU06_01660 PF05523 WxcM-like, C-terminal BXU06_01680 PF01256 Carbohydrate kinase BXU06_01680 PF03853 YjeF-related protein N-terminus BXU06_01685 PF02441 Flavoprotein BXU06_01700 PF03668 P-loop ATPase protein family BXU06_01705 PF07475 HPr Serine kinase C-terminal domain BXU06_01705 PF02603 HPr Serine kinase N terminus BXU06_01710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BXU06_01715 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BXU06_01720 PF00309 Sigma-54 factor, Activator interacting domain (AID) BXU06_01720 PF04552 Sigma-54, DNA binding domain BXU06_01720 PF04963 Sigma-54 factor, core binding domain BXU06_01725 PF00005 ABC transporter BXU06_01730 PF03968 OstA-like protein BXU06_01745 PF00571 CBS domain BXU06_01745 PF01380 SIS domain BXU06_01750 PF00999 Sodium/hydrogen exchanger family BXU06_01750 PF02254 TrkA-N domain BXU06_01770 PF03707 Bacterial signalling protein N terminal repeat BXU06_01770 PF00563 EAL domain BXU06_01770 PF00990 Diguanylate cyclase, GGDEF domain BXU06_01795 PF13462 Thioredoxin BXU06_01800 PF02673 Bacitracin resistance protein BacA BXU06_01810 PF00491 Arginase family BXU06_01815 PF00543 Nitrogen regulatory protein P-II BXU06_01820 PF00909 Ammonium Transporter Family BXU06_01825 PF12323 Helix-turn-helix domain BXU06_01825 PF01385 Probable transposase BXU06_01825 PF07282 Putative transposase DNA-binding domain BXU06_01830 PF01464 Transglycosylase SLT domain BXU06_01830 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_01840 PF00551 Formyl transferase BXU06_01845 PF01266 FAD dependent oxidoreductase BXU06_01855 PF01571 Aminomethyltransferase folate-binding domain BXU06_01855 PF08669 Glycine cleavage T-protein C-terminal barrel domain BXU06_01855 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_01855 PF17806 Sarcosine oxidase A3 domain BXU06_01865 PF00120 Glutamine synthetase, catalytic domain BXU06_01880 PF01645 Conserved region in glutamate synthase BXU06_01885 PF01037 Lrp/AsnC ligand binding domain BXU06_01900 PF01965 DJ-1/PfpI family BXU06_01905 PF08447 PAS fold BXU06_01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_01910 PF04445 Putative SAM-dependent methyltransferase BXU06_01915 PF00753 Metallo-beta-lactamase superfamily BXU06_01915 PF03772 Competence protein BXU06_01920 PF13614 AAA domain BXU06_01930 PF09382 RQC domain BXU06_01930 PF00570 HRDC domain BXU06_01930 PF00271 Helicase conserved C-terminal domain BXU06_01930 PF00270 DEAD/DEAH box helicase BXU06_01930 PF16124 RecQ zinc-binding BXU06_01935 PF01960 ArgJ family BXU06_01970 PF18429 Domain of unknown function (DUF5609) BXU06_01975 PF14489 QueF-like protein BXU06_01985 PF01242 6-pyruvoyl tetrahydropterin synthase BXU06_01990 PF06508 Queuosine biosynthesis protein QueC BXU06_02005 PF05114 Protein of unknown function (DUF692) BXU06_02015 PF01966 HD domain BXU06_02015 PF00672 HAMP domain BXU06_02020 PF01212 Beta-eliminating lyase BXU06_02025 PF13291 ACT domain BXU06_02025 PF04607 Region found in RelA / SpoT proteins BXU06_02025 PF02824 TGS domain BXU06_02030 PF01192 RNA polymerase Rpb6 BXU06_02035 PF00625 Guanylate kinase BXU06_02040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU06_02045 PF02545 Maf-like protein BXU06_02050 PF02620 Large ribosomal RNA subunit accumulation protein YceD BXU06_02055 PF01783 Ribosomal L32p protein family BXU06_02060 PF02504 Fatty acid synthesis protein BXU06_02065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BXU06_02065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BXU06_02070 PF00698 Acyl transferase domain BXU06_02080 PF00550 Phosphopantetheine attachment site BXU06_02085 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU06_02085 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU06_02090 PF00425 chorismate binding enzyme BXU06_02090 PF04715 Anthranilate synthase component I, N terminal region BXU06_02095 PF01063 Amino-transferase class IV BXU06_02105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_02105 PF08447 PAS fold BXU06_02110 PF00158 Sigma-54 interaction domain BXU06_02110 PF02954 Bacterial regulatory protein, Fis family BXU06_02110 PF00072 Response regulator receiver domain BXU06_02115 PF00989 PAS fold BXU06_02115 PF00512 His Kinase A (phospho-acceptor) domain BXU06_02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_02135 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BXU06_02135 PF08501 Shikimate dehydrogenase substrate binding domain BXU06_02135 PF01488 Shikimate / quinate 5-dehydrogenase BXU06_02140 PF00912 Transglycosylase BXU06_02145 PF01668 SmpB protein BXU06_02155 PF00117 Glutamine amidotransferase class-I BXU06_02155 PF02540 NAD synthase BXU06_02155 PF00958 GMP synthase C terminal domain BXU06_02160 PF13361 UvrD-like helicase C-terminal domain BXU06_02160 PF00580 UvrD/REP helicase N-terminal domain BXU06_02215 PF12832 MFS_1 like family BXU06_02220 PF01479 S4 domain BXU06_02225 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU06_02230 PF03979 Sigma-70 factor, region 1.1 BXU06_02230 PF00140 Sigma-70 factor, region 1.2 BXU06_02230 PF04542 Sigma-70 region 2 BXU06_02230 PF04539 Sigma-70 region 3 BXU06_02230 PF04545 Sigma-70, region 4 BXU06_02230 PF04546 Sigma-70, non-essential region BXU06_02235 PF08278 DNA primase DnaG DnaB-binding BXU06_02235 PF01807 CHC2 zinc finger BXU06_02235 PF10410 DnaB-helicase binding domain of primase BXU06_02235 PF08275 DNA primase catalytic core, N-terminal domain BXU06_02245 PF01165 Ribosomal protein S21 BXU06_02250 PF05690 Thiazole biosynthesis protein ThiG BXU06_02255 PF02597 ThiS family BXU06_02255 PF05690 Thiazole biosynthesis protein ThiG BXU06_02275 PF01430 Hsp33 protein BXU06_02285 PF13230 Glutamine amidotransferases class-II BXU06_02295 PF00270 DEAD/DEAH box helicase BXU06_02295 PF02559 CarD-like/TRCF domain BXU06_02295 PF03461 TRCF domain BXU06_02295 PF17757 UvrB interaction domain BXU06_02295 PF00271 Helicase conserved C-terminal domain BXU06_02305 PF00291 Pyridoxal-phosphate dependent enzyme BXU06_02310 PF01250 Ribosomal protein S6 BXU06_02320 PF01084 Ribosomal protein S18 BXU06_02325 PF01281 Ribosomal protein L9, N-terminal domain BXU06_02325 PF03948 Ribosomal protein L9, C-terminal domain BXU06_02330 PF02618 YceG-like family BXU06_02335 PF02223 Thymidylate kinase BXU06_02340 PF09115 DNA polymerase III, delta subunit, C terminal BXU06_02345 PF01026 TatD related DNase BXU06_02350 PF12706 Beta-lactamase superfamily domain BXU06_02350 PF03099 Biotin/lipoate A/B protein ligase family BXU06_02355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_02355 PF08447 PAS fold BXU06_02355 PF13426 PAS domain BXU06_02365 PF00293 NUDIX domain BXU06_02370 PF00986 DNA gyrase B subunit, carboxyl terminus BXU06_02370 PF01751 Toprim domain BXU06_02370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_02370 PF00204 DNA gyrase B BXU06_02375 PF11806 Domain of unknown function (DUF3327) BXU06_02375 PF00756 Putative esterase BXU06_02395 PF07715 TonB-dependent Receptor Plug Domain BXU06_02395 PF00593 TonB dependent receptor BXU06_02405 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_02415 PF01609 Transposase DDE domain BXU06_02415 PF13808 DDE_Tnp_1-associated BXU06_02425 PF14710 Respiratory nitrate reductase alpha N-terminal BXU06_02425 PF00384 Molybdopterin oxidoreductase BXU06_02425 PF01568 Molydopterin dinucleotide binding domain BXU06_02430 PF14711 Respiratory nitrate reductase beta C-terminal BXU06_02430 PF13247 4Fe-4S dicluster domain BXU06_02435 PF02613 Nitrate reductase delta subunit BXU06_02440 PF02665 Nitrate reductase gamma subunit BXU06_02445 PF01527 Transposase BXU06_02450 PF13333 Integrase core domain BXU06_02450 PF00665 Integrase core domain BXU06_02450 PF13276 HTH-like domain BXU06_02460 PF00270 DEAD/DEAH box helicase BXU06_02460 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BXU06_02460 PF17191 RecG wedge domain BXU06_02465 PF03956 Lysine exporter LysO BXU06_02525 PF01266 FAD dependent oxidoreductase BXU06_02530 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_02535 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_02540 PF08402 TOBE domain BXU06_02540 PF00005 ABC transporter BXU06_02545 PF13416 Bacterial extracellular solute-binding protein BXU06_02550 PF00202 Aminotransferase class-III BXU06_02555 PF00120 Glutamine synthetase, catalytic domain BXU06_02560 PF07722 Peptidase C26 BXU06_02565 PF01381 Helix-turn-helix BXU06_02565 PF07883 Cupin domain BXU06_02570 PF00171 Aldehyde dehydrogenase family BXU06_02580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_02580 PF00183 Hsp90 protein BXU06_02585 PF00892 EamA-like transporter family BXU06_02590 PF02954 Bacterial regulatory protein, Fis family BXU06_02590 PF00072 Response regulator receiver domain BXU06_02590 PF00158 Sigma-54 interaction domain BXU06_02595 PF01614 Bacterial transcriptional regulator BXU06_02595 PF09339 IclR helix-turn-helix domain BXU06_02600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_02600 PF02770 Acyl-CoA dehydrogenase, middle domain BXU06_02600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU06_02605 PF02515 CoA-transferase family III BXU06_02615 PF00267 Gram-negative porin BXU06_02620 PF03471 Transporter associated domain BXU06_02620 PF01595 Cyclin M transmembrane N-terminal domain BXU06_02620 PF00571 CBS domain BXU06_02625 PF01478 Type IV leader peptidase family BXU06_02625 PF06750 Bacterial Peptidase A24 N-terminal domain BXU06_02630 PF01121 Dephospho-CoA kinase BXU06_02635 PF07072 Cell division protein BXU06_02640 PF03884 DNA gyrase inhibitor YacG BXU06_02655 PF02463 RecF/RecN/SMC N terminal domain BXU06_02660 PF01797 Transposase IS200 like BXU06_02670 PF02653 Branched-chain amino acid transport system / permease component BXU06_02675 PF02653 Branched-chain amino acid transport system / permease component BXU06_02675 PF11862 Domain of unknown function (DUF3382) BXU06_02680 PF00005 ABC transporter BXU06_02680 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_02685 PF00005 ABC transporter BXU06_02690 PF01774 UreD urease accessory protein BXU06_02695 PF00547 Urease, gamma subunit BXU06_02700 PF00699 Urease beta subunit BXU06_02705 PF01979 Amidohydrolase family BXU06_02705 PF00449 Urease alpha-subunit, N-terminal domain BXU06_02710 PF02814 UreE urease accessory protein, N-terminal domain BXU06_02710 PF05194 UreE urease accessory protein, C-terminal domain BXU06_02715 PF01730 UreF BXU06_02720 PF02492 CobW/HypB/UreG, nucleotide-binding domain BXU06_02725 PF04955 HupE / UreJ protein BXU06_02730 PF04293 SpoVR like protein BXU06_02735 PF04285 Protein of unknown function (DUF444) BXU06_02740 PF06798 PrkA serine protein kinase C-terminal domain BXU06_02740 PF08298 PrkA AAA domain BXU06_02745 PF01235 Sodium:alanine symporter family BXU06_02750 PF00512 His Kinase A (phospho-acceptor) domain BXU06_02750 PF00672 HAMP domain BXU06_02750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_02755 PF00486 Transcriptional regulatory protein, C terminal BXU06_02755 PF00072 Response regulator receiver domain BXU06_02760 PF13840 ACT domain BXU06_02760 PF01842 ACT domain BXU06_02760 PF00696 Amino acid kinase family BXU06_02780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_02780 PF00672 HAMP domain BXU06_02790 PF00175 Oxidoreductase NAD-binding domain BXU06_02790 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_02790 PF00970 Oxidoreductase FAD-binding domain BXU06_02800 PF00672 HAMP domain BXU06_02800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_02800 PF17200 Single Cache domain 2 BXU06_02805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_02805 PF00672 HAMP domain BXU06_02805 PF17200 Single Cache domain 2 BXU06_02825 PF00593 TonB dependent receptor BXU06_02825 PF07715 TonB-dependent Receptor Plug Domain BXU06_02835 PF12801 4Fe-4S binding domain BXU06_02855 PF07715 TonB-dependent Receptor Plug Domain BXU06_02855 PF00593 TonB dependent receptor BXU06_02870 PF12323 Helix-turn-helix domain BXU06_02870 PF01385 Probable transposase BXU06_02870 PF07282 Putative transposase DNA-binding domain BXU06_02885 PF07715 TonB-dependent Receptor Plug Domain BXU06_02885 PF00593 TonB dependent receptor BXU06_02895 PF01618 MotA/TolQ/ExbB proton channel family BXU06_02900 PF02472 Biopolymer transport protein ExbD/TolR BXU06_02930 PF12704 MacB-like periplasmic core domain BXU06_02930 PF02687 FtsX-like permease family BXU06_02930 PF00005 ABC transporter BXU06_02935 PF00005 ABC transporter BXU06_02935 PF02687 FtsX-like permease family BXU06_02935 PF12704 MacB-like periplasmic core domain BXU06_02960 PF03466 LysR substrate binding domain BXU06_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_02970 PF13291 ACT domain BXU06_02970 PF02824 TGS domain BXU06_02970 PF04607 Region found in RelA / SpoT proteins BXU06_02975 PF00572 Ribosomal protein L13 BXU06_02980 PF00380 Ribosomal protein S9/S16 BXU06_02985 PF01521 Iron-sulphur cluster biosynthesis BXU06_02990 PF03705 CheR methyltransferase, all-alpha domain BXU06_02990 PF01739 CheR methyltransferase, SAM binding domain BXU06_02995 PF01266 FAD dependent oxidoreductase BXU06_03000 PF01370 NAD dependent epimerase/dehydratase family BXU06_03000 PF02222 ATP-grasp domain BXU06_03010 PF01810 LysE type translocator BXU06_03025 PF01292 Prokaryotic cytochrome b561 BXU06_03030 PF00639 PPIC-type PPIASE domain BXU06_03030 PF09312 SurA N-terminal domain BXU06_03035 PF07690 Major Facilitator Superfamily BXU06_03040 PF01757 Acyltransferase family BXU06_03045 PF02321 Outer membrane efflux protein BXU06_03050 PF00005 ABC transporter BXU06_03050 PF02687 FtsX-like permease family BXU06_03050 PF12704 MacB-like periplasmic core domain BXU06_03055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU06_03080 PF02770 Acyl-CoA dehydrogenase, middle domain BXU06_03080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU06_03080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_03085 PF00108 Thiolase, N-terminal domain BXU06_03085 PF02803 Thiolase, C-terminal domain BXU06_03090 PF13411 MerR HTH family regulatory protein BXU06_03095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BXU06_03095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BXU06_03100 PF00501 AMP-binding enzyme BXU06_03105 PF00005 ABC transporter BXU06_03105 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_03110 PF02653 Branched-chain amino acid transport system / permease component BXU06_03125 PF00005 ABC transporter BXU06_03130 PF14535 AMP-binding enzyme C-terminal domain BXU06_03130 PF00501 AMP-binding enzyme BXU06_03135 PF00171 Aldehyde dehydrogenase family BXU06_03150 PF00378 Enoyl-CoA hydratase/isomerase BXU06_03155 PF00378 Enoyl-CoA hydratase/isomerase BXU06_03160 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BXU06_03160 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BXU06_03165 PF03969 AFG1-like ATPase BXU06_03175 PF17151 Periplasmic sensor domain BXU06_03175 PF00990 Diguanylate cyclase, GGDEF domain BXU06_03185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_03205 PF02508 Rnf-Nqr subunit, membrane protein BXU06_03210 PF04060 Putative Fe-S cluster BXU06_03215 PF13375 RnfC Barrel sandwich hybrid domain BXU06_03215 PF10531 SLBB domain BXU06_03215 PF13237 4Fe-4S dicluster domain BXU06_03215 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BXU06_03220 PF03116 NQR2, RnfD, RnfE family BXU06_03225 PF04205 FMN-binding domain BXU06_03230 PF02508 Rnf-Nqr subunit, membrane protein BXU06_03235 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU06_03235 PF00633 Helix-hairpin-helix motif BXU06_03235 PF10576 Iron-sulfur binding domain of endonuclease III BXU06_03240 PF13180 PDZ domain BXU06_03245 PF03737 Aldolase/RraA BXU06_03250 PF02463 RecF/RecN/SMC N terminal domain BXU06_03255 PF01513 ATP-NAD kinase BXU06_03260 PF07194 P2 response regulator binding domain BXU06_03260 PF01627 Hpt domain BXU06_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_03260 PF02895 Signal transducing histidine kinase, homodimeric domain BXU06_03260 PF01584 CheW-like domain BXU06_03265 PF04344 Chemotaxis phosphatase, CheZ BXU06_03270 PF00072 Response regulator receiver domain BXU06_03275 PF01584 CheW-like domain BXU06_03275 PF00072 Response regulator receiver domain BXU06_03280 PF00072 Response regulator receiver domain BXU06_03280 PF01584 CheW-like domain BXU06_03285 PF00512 His Kinase A (phospho-acceptor) domain BXU06_03285 PF00989 PAS fold BXU06_03285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_03290 PF00072 Response regulator receiver domain BXU06_03290 PF00486 Transcriptional regulatory protein, C terminal BXU06_03295 PF03975 CheD chemotactic sensory transduction BXU06_03300 PF00037 4Fe-4S binding domain BXU06_03300 PF11953 Domain of unknown function (DUF3470) BXU06_03305 PF00749 tRNA synthetases class I (E and Q), catalytic domain BXU06_03310 PF00563 EAL domain BXU06_03310 PF00990 Diguanylate cyclase, GGDEF domain BXU06_03310 PF03707 Bacterial signalling protein N terminal repeat BXU06_03315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BXU06_03315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BXU06_03315 PF01842 ACT domain BXU06_03320 PF02913 FAD linked oxidases, C-terminal domain BXU06_03320 PF01565 FAD binding domain BXU06_03325 PF00696 Amino acid kinase family BXU06_03330 PF00696 Amino acid kinase family BXU06_03340 PF00483 Nucleotidyl transferase BXU06_03345 PF01653 NAD-dependent DNA ligase adenylation domain BXU06_03345 PF03120 NAD-dependent DNA ligase OB-fold domain BXU06_03345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BXU06_03345 PF12826 Helix-hairpin-helix motif BXU06_03345 PF00533 BRCA1 C Terminus (BRCT) domain BXU06_03350 PF04354 ZipA, C-terminal FtsZ-binding domain BXU06_03355 PF00072 Response regulator receiver domain BXU06_03355 PF00196 Bacterial regulatory proteins, luxR family BXU06_03360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_03360 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BXU06_03360 PF00672 HAMP domain BXU06_03360 PF07730 Histidine kinase BXU06_03365 PF00484 Carbonic anhydrase BXU06_03370 PF04055 Radical SAM superfamily BXU06_03370 PF06463 Molybdenum Cofactor Synthesis C BXU06_03375 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_03375 PF00175 Oxidoreductase NAD-binding domain BXU06_03375 PF00970 Oxidoreductase FAD-binding domain BXU06_03385 PF02390 Putative methyltransferase BXU06_03400 PF03960 ArsC family BXU06_03405 PF07690 Major Facilitator Superfamily BXU06_03410 PF07690 Major Facilitator Superfamily BXU06_03440 PF04381 Putative exonuclease, RdgC BXU06_03445 PF01728 FtsJ-like methyltransferase BXU06_03455 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BXU06_03455 PF00056 lactate/malate dehydrogenase, NAD binding domain BXU06_03460 PF00392 Bacterial regulatory proteins, gntR family BXU06_03460 PF07702 UTRA domain BXU06_03465 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BXU06_03475 PF02910 Fumarate reductase flavoprotein C-term BXU06_03475 PF00890 FAD binding domain BXU06_03480 PF13085 2Fe-2S iron-sulfur cluster binding domain BXU06_03485 PF03937 Flavinator of succinate dehydrogenase BXU06_03490 PF00285 Citrate synthase, C-terminal domain BXU06_03495 PF02779 Transketolase, pyrimidine binding domain BXU06_03495 PF16870 2-oxoglutarate dehydrogenase C-terminal BXU06_03495 PF00676 Dehydrogenase E1 component BXU06_03495 PF16078 2-oxoglutarate dehydrogenase N-terminus BXU06_03500 PF02817 e3 binding domain BXU06_03500 PF00364 Biotin-requiring enzyme BXU06_03500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BXU06_03505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BXU06_03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_03510 PF00549 CoA-ligase BXU06_03510 PF08442 ATP-grasp domain BXU06_03515 PF00549 CoA-ligase BXU06_03515 PF02629 CoA binding domain BXU06_03520 PF01385 Probable transposase BXU06_03520 PF07282 Putative transposase DNA-binding domain BXU06_03520 PF12323 Helix-turn-helix domain BXU06_03525 PF08245 Mur ligase middle domain BXU06_03525 PF01225 Mur ligase family, catalytic domain BXU06_03525 PF02875 Mur ligase family, glutamate ligase domain BXU06_03540 PF00152 tRNA synthetases class II (D, K and N) BXU06_03540 PF01336 OB-fold nucleic acid binding domain BXU06_03540 PF02938 GAD domain BXU06_03560 PF01515 Phosphate acetyl/butaryl transferase BXU06_03565 PF00871 Acetokinase family BXU06_03575 PF00334 Nucleoside diphosphate kinase BXU06_03580 PF04055 Radical SAM superfamily BXU06_03585 PF13464 Domain of unknown function (DUF4115) BXU06_03590 PF04551 GcpE protein BXU06_03595 PF13393 Histidyl-tRNA synthetase BXU06_03595 PF03129 Anticodon binding domain BXU06_03600 PF09976 Tetratricopeptide repeat-like domain BXU06_03605 PF13360 PQQ-like domain BXU06_03610 PF01926 50S ribosome-binding GTPase BXU06_03610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BXU06_03615 PF17209 Hfq protein BXU06_03620 PF01926 50S ribosome-binding GTPase BXU06_03620 PF13167 GTP-binding GTPase N-terminal BXU06_03620 PF16360 GTP-binding GTPase Middle Region BXU06_03625 PF12221 Bacterial membrane protein N terminal BXU06_03625 PF01145 SPFH domain / Band 7 family BXU06_03630 PF01145 SPFH domain / Band 7 family BXU06_03635 PF13393 Histidyl-tRNA synthetase BXU06_03640 PF00709 Adenylosuccinate synthetase BXU06_03645 PF01053 Cys/Met metabolism PLP-dependent enzyme BXU06_03660 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_03665 PF01385 Probable transposase BXU06_03665 PF12323 Helix-turn-helix domain BXU06_03665 PF07282 Putative transposase DNA-binding domain BXU06_03675 PF10091 Putative glucoamylase BXU06_03675 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BXU06_03675 PF06165 Glycosyltransferase family 36 BXU06_03680 PF00342 Phosphoglucose isomerase BXU06_03685 PF09364 XFP N-terminal domain BXU06_03685 PF09363 XFP C-terminal domain BXU06_03685 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BXU06_03695 PF05532 CsbD-like BXU06_03700 PF04972 BON domain BXU06_03740 PF14403 Circularly permuted ATP-grasp type 2 BXU06_03755 PF04168 A predicted alpha-helical domain with a conserved ER motif. BXU06_03755 PF14403 Circularly permuted ATP-grasp type 2 BXU06_03760 PF01841 Transglutaminase-like superfamily BXU06_03760 PF08379 Bacterial transglutaminase-like N-terminal region BXU06_03775 PF01522 Polysaccharide deacetylase BXU06_03785 PF00403 Heavy-metal-associated domain BXU06_03795 PF00176 SNF2 family N-terminal domain BXU06_03795 PF12419 SNF2 Helicase protein BXU06_03795 PF00271 Helicase conserved C-terminal domain BXU06_03820 PF07282 Putative transposase DNA-binding domain BXU06_03820 PF01385 Probable transposase BXU06_03820 PF12323 Helix-turn-helix domain BXU06_03830 PF01264 Chorismate synthase BXU06_03855 PF02463 RecF/RecN/SMC N terminal domain BXU06_03855 PF06470 SMC proteins Flexible Hinge Domain BXU06_03860 PF02622 Uncharacterized ACR, COG1678 BXU06_03865 PF03652 Holliday junction resolvase BXU06_03870 PF07282 Putative transposase DNA-binding domain BXU06_03870 PF01385 Probable transposase BXU06_03870 PF12323 Helix-turn-helix domain BXU06_03885 PF00085 Thioredoxin BXU06_03890 PF07690 Major Facilitator Superfamily BXU06_03900 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_03900 PF12002 MgsA AAA+ ATPase C terminal BXU06_03900 PF16193 AAA C-terminal domain BXU06_03910 PF00145 C-5 cytosine-specific DNA methylase BXU06_03925 PF02403 Seryl-tRNA synthetase N-terminal domain BXU06_03925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BXU06_03935 PF05598 Transposase domain (DUF772) BXU06_03935 PF01609 Transposase DDE domain BXU06_03945 PF02347 Glycine cleavage system P-protein BXU06_03950 PF01597 Glycine cleavage H-protein BXU06_03955 PF08669 Glycine cleavage T-protein C-terminal barrel domain BXU06_03955 PF01571 Aminomethyltransferase folate-binding domain BXU06_03975 PF01047 MarR family BXU06_03980 PF00892 EamA-like transporter family BXU06_03985 PF00892 EamA-like transporter family BXU06_03990 PF02464 Competence-damaged protein BXU06_03995 PF00342 Phosphoglucose isomerase BXU06_04000 PF00561 alpha/beta hydrolase fold BXU06_04000 PF08386 TAP-like protein BXU06_04025 PF01381 Helix-turn-helix BXU06_04025 PF00145 C-5 cytosine-specific DNA methylase BXU06_04030 PF18381 YcaO cyclodehydratase C-terminal domain BXU06_04030 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BXU06_04035 PF01523 Putative modulator of DNA gyrase BXU06_04040 PF00795 Carbon-nitrogen hydrolase BXU06_04050 PF08335 GlnD PII-uridylyltransferase BXU06_04050 PF03710 Glutamate-ammonia ligase adenylyltransferase BXU06_04060 PF00677 Lumazine binding domain BXU06_04065 PF00009 Elongation factor Tu GTP binding domain BXU06_04065 PF03144 Elongation factor Tu domain 2 BXU06_04065 PF16658 Class II release factor RF3, C-terminal domain BXU06_04095 PF01638 HxlR-like helix-turn-helix BXU06_04105 PF02805 Metal binding domain of Ada BXU06_04105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BXU06_04105 PF12833 Helix-turn-helix domain BXU06_04105 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BXU06_04110 PF09084 NMT1/THI5 like BXU06_04120 PF00296 Luciferase-like monooxygenase BXU06_04125 PF07702 UTRA domain BXU06_04125 PF00392 Bacterial regulatory proteins, gntR family BXU06_04130 PF05724 Thiopurine S-methyltransferase (TPMT) BXU06_04135 PF00563 EAL domain BXU06_04135 PF05231 MASE1 BXU06_04135 PF13426 PAS domain BXU06_04135 PF08448 PAS fold BXU06_04135 PF08447 PAS fold BXU06_04135 PF00990 Diguanylate cyclase, GGDEF domain BXU06_04140 PF00583 Acetyltransferase (GNAT) family BXU06_04140 PF00696 Amino acid kinase family BXU06_04145 PF00672 HAMP domain BXU06_04145 PF02743 Cache domain BXU06_04145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_04165 PF00462 Glutaredoxin BXU06_04170 PF02623 FliW protein BXU06_04175 PF05726 Pirin C-terminal cupin domain BXU06_04175 PF02678 Pirin BXU06_04185 PF00919 Uncharacterized protein family UPF0004 BXU06_04185 PF04055 Radical SAM superfamily BXU06_04185 PF18693 TRAM domain BXU06_04190 PF07879 PHB/PHA accumulation regulator DNA-binding domain BXU06_04190 PF05233 PHB accumulation regulatory domain BXU06_04200 PF00246 Zinc carboxypeptidase BXU06_04200 PF18027 Cytosolic carboxypeptidase N-terminal domain BXU06_04250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_04250 PF00072 Response regulator receiver domain BXU06_04250 PF09456 RcsC Alpha-Beta-Loop (ABL) BXU06_04250 PF00512 His Kinase A (phospho-acceptor) domain BXU06_04275 PF01119 DNA mismatch repair protein, C-terminal domain BXU06_04275 PF08676 MutL C terminal dimerisation domain BXU06_04280 PF09335 SNARE associated Golgi protein BXU06_04285 PF02355 Protein export membrane protein BXU06_04285 PF07549 SecD/SecF GG Motif BXU06_04290 PF02355 Protein export membrane protein BXU06_04290 PF13721 SecD export protein N-terminal TM region BXU06_04290 PF07549 SecD/SecF GG Motif BXU06_04295 PF02699 Preprotein translocase subunit BXU06_04300 PF01702 Queuine tRNA-ribosyltransferase BXU06_04310 PF03129 Anticodon binding domain BXU06_04310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BXU06_04310 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BXU06_04310 PF02824 TGS domain BXU06_04315 PF00707 Translation initiation factor IF-3, C-terminal domain BXU06_04315 PF05198 Translation initiation factor IF-3, N-terminal domain BXU06_04320 PF01632 Ribosomal protein L35 BXU06_04325 PF00453 Ribosomal protein L20 BXU06_04330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BXU06_04330 PF01409 tRNA synthetases class II core domain (F) BXU06_04335 PF03483 B3/4 domain BXU06_04335 PF01588 Putative tRNA binding domain BXU06_04335 PF03147 Ferredoxin-fold anticodon binding domain BXU06_04335 PF03484 tRNA synthetase B5 domain BXU06_04335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BXU06_04340 PF00216 Bacterial DNA-binding protein BXU06_04380 PF00374 Nickel-dependent hydrogenase BXU06_04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_04385 PF00512 His Kinase A (phospho-acceptor) domain BXU06_04390 PF04955 HupE / UreJ protein BXU06_04395 PF18019 HD domain BXU06_04395 PF18395 Cas3 C-terminal domain BXU06_04400 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) BXU06_04410 PF09344 CT1975-like protein BXU06_04425 PF01867 CRISPR associated protein Cas1 BXU06_04430 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) BXU06_04445 PF01648 4'-phosphopantetheinyl transferase superfamily BXU06_04450 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BXU06_04455 PF11967 Recombination protein O N terminal BXU06_04455 PF02565 Recombination protein O C terminal BXU06_04460 PF01926 50S ribosome-binding GTPase BXU06_04460 PF07650 KH domain BXU06_04465 PF00035 Double-stranded RNA binding motif BXU06_04465 PF14622 Ribonuclease-III-like BXU06_04470 PF10502 Signal peptidase, peptidase S26 BXU06_04475 PF03144 Elongation factor Tu domain 2 BXU06_04475 PF00679 Elongation factor G C-terminus BXU06_04475 PF06421 GTP-binding protein LepA C-terminus BXU06_04475 PF00009 Elongation factor Tu GTP binding domain BXU06_04485 PF13180 PDZ domain BXU06_04495 PF17188 MucB/RseB C-terminal domain BXU06_04495 PF03888 MucB/RseB N-terminal domain BXU06_04505 PF08281 Sigma-70, region 4 BXU06_04505 PF04542 Sigma-70 region 2 BXU06_04510 PF01062 Bestrophin, RFP-TM, chloride channel BXU06_04515 PF01027 Inhibitor of apoptosis-promoting Bax1 BXU06_04525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU06_04525 PF05698 Bacterial trigger factor protein (TF) C-terminus BXU06_04525 PF05697 Bacterial trigger factor protein (TF) BXU06_04530 PF00574 Clp protease BXU06_04535 PF10431 C-terminal, D2-small domain, of ClpB protein BXU06_04535 PF07724 AAA domain (Cdc48 subfamily) BXU06_04535 PF06689 ClpX C4-type zinc finger BXU06_04540 PF05362 Lon protease (S16) C-terminal proteolytic domain BXU06_04540 PF02190 ATP-dependent protease La (LON) substrate-binding domain BXU06_04540 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_04545 PF00216 Bacterial DNA-binding protein BXU06_04560 PF05698 Bacterial trigger factor protein (TF) C-terminus BXU06_04570 PF01170 Putative RNA methylase family UPF0020 BXU06_04570 PF02926 THUMP domain BXU06_04590 PF03466 LysR substrate binding domain BXU06_04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_04600 PF00248 Aldo/keto reductase family BXU06_04620 PF02254 TrkA-N domain BXU06_04620 PF00999 Sodium/hydrogen exchanger family BXU06_04625 PF03485 Arginyl tRNA synthetase N terminal domain BXU06_04625 PF00750 tRNA synthetases class I (R) BXU06_04625 PF05746 DALR anticodon binding domain BXU06_04650 PF03466 LysR substrate binding domain BXU06_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_04660 PF02769 AIR synthase related protein, C-terminal domain BXU06_04660 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BXU06_04660 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BXU06_04665 PF00543 Nitrogen regulatory protein P-II BXU06_04675 PF01425 Amidase BXU06_04690 PF10458 Valyl tRNA synthetase tRNA binding arm BXU06_04690 PF00133 tRNA synthetases class I (I, L, M and V) BXU06_04690 PF08264 Anticodon-binding domain of tRNA BXU06_04695 PF00072 Response regulator receiver domain BXU06_04695 PF00990 Diguanylate cyclase, GGDEF domain BXU06_04705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BXU06_04710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BXU06_04715 PF00149 Calcineurin-like phosphoesterase BXU06_04720 PF01734 Patatin-like phospholipase BXU06_04725 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_04730 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_04740 PF00271 Helicase conserved C-terminal domain BXU06_04740 PF00270 DEAD/DEAH box helicase BXU06_04745 PF03186 CobD/Cbib protein BXU06_04745 PF17113 Regulatory signalling modulator protein AmpE BXU06_04765 PF00990 Diguanylate cyclase, GGDEF domain BXU06_04765 PF17151 Periplasmic sensor domain BXU06_04770 PF02203 Tar ligand binding domain homologue BXU06_04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_04770 PF00672 HAMP domain BXU06_04775 PF03707 Bacterial signalling protein N terminal repeat BXU06_04775 PF00563 EAL domain BXU06_04775 PF00990 Diguanylate cyclase, GGDEF domain BXU06_04785 PF00202 Aminotransferase class-III BXU06_04790 PF01738 Dienelactone hydrolase family BXU06_04795 PF01914 MarC family integral membrane protein BXU06_04805 PF06594 Haemolysin-type calcium binding protein related domain BXU06_04805 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BXU06_04815 PF01544 CorA-like Mg2+ transporter protein BXU06_04820 PF02541 Ppx/GppA phosphatase family BXU06_04825 PF01895 PhoU domain BXU06_04830 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BXU06_04835 PF02542 YgbB family BXU06_04840 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BXU06_04845 PF00929 Exonuclease BXU06_04850 PF00075 RNase H BXU06_04855 PF08241 Methyltransferase domain BXU06_04860 PF16123 Hydroxyacylglutathione hydrolase C-terminus BXU06_04860 PF00753 Metallo-beta-lactamase superfamily BXU06_04865 PF01476 LysM domain BXU06_04865 PF01464 Transglycosylase SLT domain BXU06_04875 PF13419 Haloacid dehalogenase-like hydrolase BXU06_04905 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_04905 PF17871 AAA lid domain BXU06_04905 PF10431 C-terminal, D2-small domain, of ClpB protein BXU06_04905 PF02861 Clp amino terminal domain, pathogenicity island component BXU06_04905 PF07724 AAA domain (Cdc48 subfamily) BXU06_04910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_04910 PF17200 Single Cache domain 2 BXU06_04910 PF00672 HAMP domain BXU06_04915 PF13525 Outer membrane lipoprotein BXU06_04920 PF01479 S4 domain BXU06_04920 PF00849 RNA pseudouridylate synthase BXU06_04930 PF02954 Bacterial regulatory protein, Fis family BXU06_04930 PF00072 Response regulator receiver domain BXU06_04930 PF00158 Sigma-54 interaction domain BXU06_04940 PF01381 Helix-turn-helix BXU06_04940 PF07883 Cupin domain BXU06_04945 PF03594 Benzoate membrane transport protein BXU06_04950 PF00270 DEAD/DEAH box helicase BXU06_04950 PF00271 Helicase conserved C-terminal domain BXU06_04955 PF00072 Response regulator receiver domain BXU06_04960 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BXU06_04960 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BXU06_04965 PF03702 Anhydro-N-acetylmuramic acid kinase BXU06_04975 PF00378 Enoyl-CoA hydratase/isomerase BXU06_04980 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BXU06_04980 PF01266 FAD dependent oxidoreductase BXU06_04990 PF00849 RNA pseudouridylate synthase BXU06_05005 PF00762 Ferrochelatase BXU06_05010 PF01580 FtsK/SpoIIIE family BXU06_05010 PF09397 Ftsk gamma domain BXU06_05010 PF17854 FtsK alpha domain BXU06_05010 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BXU06_05020 PF01053 Cys/Met metabolism PLP-dependent enzyme BXU06_05040 PF00005 ABC transporter BXU06_05045 PF12704 MacB-like periplasmic core domain BXU06_05045 PF02687 FtsX-like permease family BXU06_05060 PF00860 Permease family BXU06_05075 PF00563 EAL domain BXU06_05075 PF03707 Bacterial signalling protein N terminal repeat BXU06_05075 PF00990 Diguanylate cyclase, GGDEF domain BXU06_05085 PF01197 Ribosomal protein L31 BXU06_05100 PF00459 Inositol monophosphatase family BXU06_05105 PF00588 SpoU rRNA Methylase family BXU06_05115 PF01867 CRISPR associated protein Cas1 BXU06_05120 PF18019 HD domain BXU06_05130 PF09611 CRISPR-associated protein (Cas_Csy1) BXU06_05135 PF09614 CRISPR-associated protein (Cas_Csy2) BXU06_05140 PF09615 CRISPR-associated protein (Cas_Csy3) BXU06_05145 PF09618 CRISPR-associated protein (Cas_Csy4) BXU06_05165 PF00005 ABC transporter BXU06_05185 PF00005 ABC transporter BXU06_05200 PF02463 RecF/RecN/SMC N terminal domain BXU06_05210 PF03466 LysR substrate binding domain BXU06_05210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_05215 PF00330 Aconitase family (aconitate hydratase) BXU06_05220 PF00694 Aconitase C-terminal domain BXU06_05225 PF00180 Isocitrate/isopropylmalate dehydrogenase BXU06_05230 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_05230 PF02774 Semialdehyde dehydrogenase, dimerisation domain BXU06_05235 PF00258 Flavodoxin BXU06_05255 PF01497 Periplasmic binding protein BXU06_05260 PF03548 Outer membrane lipoprotein carrier protein LolA BXU06_05265 PF02540 NAD synthase BXU06_05265 PF00795 Carbon-nitrogen hydrolase BXU06_05275 PF05114 Protein of unknown function (DUF692) BXU06_05290 PF03466 LysR substrate binding domain BXU06_05290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_05295 PF01810 LysE type translocator BXU06_05300 PF04461 Protein of unknown function (DUF520) BXU06_05315 PF00764 Arginosuccinate synthase BXU06_05320 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BXU06_05320 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BXU06_05325 PF01276 Orn/Lys/Arg decarboxylase, major domain BXU06_05325 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BXU06_05335 PF04972 BON domain BXU06_05340 PF00005 ABC transporter BXU06_05340 PF12848 ABC transporter BXU06_05345 PF00814 Glycoprotease family BXU06_05350 PF02566 OsmC-like protein BXU06_05360 PF03831 PhnA domain BXU06_05360 PF08274 PhnA Zinc-Ribbon BXU06_05370 PF00962 Adenosine/AMP deaminase BXU06_05390 PF17810 Arginine decarboxylase helical bundle domain BXU06_05390 PF17944 Arginine decarboxylase C-terminal helical extension BXU06_05390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BXU06_05405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BXU06_05405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BXU06_05405 PF00205 Thiamine pyrophosphate enzyme, central domain BXU06_05410 PF01842 ACT domain BXU06_05425 PF13808 DDE_Tnp_1-associated BXU06_05425 PF01609 Transposase DDE domain BXU06_05435 PF06865 Pyrimidine/purine nucleoside phosphorylase BXU06_05440 PF03960 ArsC family BXU06_05445 PF13193 AMP-binding enzyme C-terminal domain BXU06_05445 PF00501 AMP-binding enzyme BXU06_05450 PF17384 RimP C-terminal SH3 domain BXU06_05450 PF02576 RimP N-terminal domain BXU06_05455 PF08529 NusA N-terminal domain BXU06_05455 PF13184 NusA-like KH domain BXU06_05460 PF04760 Translation initiation factor IF-2, N-terminal region BXU06_05460 PF11987 Translation-initiation factor 2 BXU06_05460 PF00009 Elongation factor Tu GTP binding domain BXU06_05460 PF08364 Bacterial translation initiation factor IF-2 associated region BXU06_05465 PF02033 Ribosome-binding factor A BXU06_05470 PF01509 TruB family pseudouridylate synthase (N terminal domain) BXU06_05470 PF16198 tRNA pseudouridylate synthase B C-terminal domain BXU06_05470 PF09157 Pseudouridine synthase II TruB, C-terminal BXU06_05475 PF00312 Ribosomal protein S15 BXU06_05480 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BXU06_05480 PF01138 3' exoribonuclease family, domain 1 BXU06_05480 PF00013 KH domain BXU06_05480 PF00575 S1 RNA binding domain BXU06_05480 PF03725 3' exoribonuclease family, domain 2 BXU06_05485 PF00588 SpoU rRNA Methylase family BXU06_05485 PF08032 RNA 2'-O ribose methyltransferase substrate binding BXU06_05505 PF01618 MotA/TolQ/ExbB proton channel family BXU06_05510 PF00202 Aminotransferase class-III BXU06_05515 PF00120 Glutamine synthetase, catalytic domain BXU06_05525 PF01381 Helix-turn-helix BXU06_05525 PF07883 Cupin domain BXU06_05530 PF17932 Tetracyclin repressor-like, C-terminal domain BXU06_05530 PF00440 Bacterial regulatory proteins, tetR family BXU06_05535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BXU06_05545 PF01063 Amino-transferase class IV BXU06_05550 PF02743 Cache domain BXU06_05550 PF00672 HAMP domain BXU06_05550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_05555 PF02441 Flavoprotein BXU06_05555 PF04127 DNA / pantothenate metabolism flavoprotein BXU06_05560 PF17848 Acetyl-coA carboxylase zinc finger domain BXU06_05560 PF01039 Carboxyl transferase domain BXU06_05565 PF00290 Tryptophan synthase alpha chain BXU06_05570 PF00291 Pyridoxal-phosphate dependent enzyme BXU06_05575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BXU06_05580 PF01416 tRNA pseudouridine synthase BXU06_05595 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_05595 PF02774 Semialdehyde dehydrogenase, dimerisation domain BXU06_05610 PF03061 Thioesterase superfamily BXU06_05615 PF00892 EamA-like transporter family BXU06_05620 PF01740 STAS domain BXU06_05620 PF00916 Sulfate permease family BXU06_05625 PF03544 Gram-negative bacterial TonB protein C-terminal BXU06_05640 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_05645 PF00005 ABC transporter BXU06_05650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BXU06_05650 PF18267 Rubredoxin NAD+ reductase C-terminal domain BXU06_05650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BXU06_05650 PF04324 BFD-like [2Fe-2S] binding domain BXU06_05650 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_05660 PF04324 BFD-like [2Fe-2S] binding domain BXU06_05660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BXU06_05660 PF00384 Molybdopterin oxidoreductase BXU06_05660 PF01568 Molydopterin dinucleotide binding domain BXU06_05665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU06_05670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_05670 PF08447 PAS fold BXU06_05670 PF13426 PAS domain BXU06_05680 PF00378 Enoyl-CoA hydratase/isomerase BXU06_05685 PF00561 alpha/beta hydrolase fold BXU06_05690 PF00933 Glycosyl hydrolase family 3 N terminal domain BXU06_05695 PF00293 NUDIX domain BXU06_05705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_05705 PF00672 HAMP domain BXU06_05710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_05710 PF00672 HAMP domain BXU06_05710 PF02743 Cache domain BXU06_05715 PF01053 Cys/Met metabolism PLP-dependent enzyme BXU06_05730 PF05598 Transposase domain (DUF772) BXU06_05730 PF01609 Transposase DDE domain BXU06_05740 PF01145 SPFH domain / Band 7 family BXU06_05745 PF17200 Single Cache domain 2 BXU06_05745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_05745 PF00672 HAMP domain BXU06_05755 PF00550 Phosphopantetheine attachment site BXU06_05755 PF08659 KR domain BXU06_05755 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU06_05755 PF14765 Polyketide synthase dehydratase BXU06_05755 PF09277 Erythronolide synthase, docking BXU06_05755 PF16197 Ketoacyl-synthetase C-terminal extension BXU06_05755 PF08240 Alcohol dehydrogenase GroES-like domain BXU06_05755 PF00698 Acyl transferase domain BXU06_05755 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU06_05755 PF08990 Erythronolide synthase docking BXU06_05760 PF00881 Nitroreductase family BXU06_05765 PF00440 Bacterial regulatory proteins, tetR family BXU06_05765 PF16925 Tetracyclin repressor-like, C-terminal domain BXU06_05785 PF12728 Helix-turn-helix domain BXU06_05805 PF02463 RecF/RecN/SMC N terminal domain BXU06_05815 PF00330 Aconitase family (aconitate hydratase) BXU06_05815 PF06434 Aconitate hydratase 2 N-terminus BXU06_05815 PF11791 Aconitate B N-terminal domain BXU06_05820 PF00176 SNF2 family N-terminal domain BXU06_05820 PF00271 Helicase conserved C-terminal domain BXU06_05825 PF17191 RecG wedge domain BXU06_05825 PF13749 Putative ATP-dependent DNA helicase recG C-terminal BXU06_05825 PF00270 DEAD/DEAH box helicase BXU06_05830 PF01555 DNA methylase BXU06_05840 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BXU06_05840 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BXU06_05855 PF00106 short chain dehydrogenase BXU06_05860 PF03741 Integral membrane protein TerC family BXU06_05870 PF04002 RadC-like JAB domain BXU06_05875 PF05958 tRNA (Uracil-5-)-methyltransferase BXU06_05885 PF01923 Cobalamin adenosyltransferase BXU06_05890 PF00561 alpha/beta hydrolase fold BXU06_05895 PF13638 PIN domain BXU06_05895 PF02562 PhoH-like protein BXU06_05900 PF00578 AhpC/TSA family BXU06_05925 PF04304 Protein of unknown function (DUF454) BXU06_05930 PF01641 SelR domain BXU06_05945 PF00293 NUDIX domain BXU06_05960 PF00392 Bacterial regulatory proteins, gntR family BXU06_05960 PF00155 Aminotransferase class I and II BXU06_05985 PF12833 Helix-turn-helix domain BXU06_05990 PF05088 Bacterial NAD-glutamate dehydrogenase BXU06_06000 PF01609 Transposase DDE domain BXU06_06000 PF13808 DDE_Tnp_1-associated BXU06_06005 PF03466 LysR substrate binding domain BXU06_06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_06010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BXU06_06010 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BXU06_06015 PF00374 Nickel-dependent hydrogenase BXU06_06020 PF01292 Prokaryotic cytochrome b561 BXU06_06025 PF01381 Helix-turn-helix BXU06_06030 PF01593 Flavin containing amine oxidoreductase BXU06_06035 PF00027 Cyclic nucleotide-binding domain BXU06_06035 PF13545 Crp-like helix-turn-helix domain BXU06_06040 PF04055 Radical SAM superfamily BXU06_06040 PF06969 HemN C-terminal domain BXU06_06050 PF13193 AMP-binding enzyme C-terminal domain BXU06_06050 PF00501 AMP-binding enzyme BXU06_06050 PF16177 Acetyl-coenzyme A synthetase N-terminus BXU06_06055 PF00892 EamA-like transporter family BXU06_06060 PF12320 Type 5 capsule protein repressor C-terminal domain BXU06_06060 PF00149 Calcineurin-like phosphoesterase BXU06_06065 PF13476 AAA domain BXU06_06085 PF00871 Acetokinase family BXU06_06090 PF01515 Phosphate acetyl/butaryl transferase BXU06_06090 PF07085 DRTGG domain BXU06_06100 PF04286 Protein of unknown function (DUF445) BXU06_06110 PF01351 Ribonuclease HII BXU06_06120 PF02684 Lipid-A-disaccharide synthetase BXU06_06125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BXU06_06125 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_06130 PF07977 FabA-like domain BXU06_06135 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BXU06_06135 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_06145 PF07244 Surface antigen variable number repeat BXU06_06145 PF01103 Surface antigen BXU06_06150 PF02163 Peptidase family M50 BXU06_06150 PF17820 PDZ domain BXU06_06155 PF13288 DXP reductoisomerase C-terminal domain BXU06_06155 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BXU06_06155 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BXU06_06165 PF01255 Putative undecaprenyl diphosphate synthase BXU06_06170 PF01765 Ribosome recycling factor BXU06_06175 PF00696 Amino acid kinase family BXU06_06180 PF00889 Elongation factor TS BXU06_06185 PF00318 Ribosomal protein S2 BXU06_06205 PF01790 Prolipoprotein diacylglyceryl transferase BXU06_06220 PF00155 Aminotransferase class I and II BXU06_06225 PF17674 HHH domain BXU06_06225 PF00575 S1 RNA binding domain BXU06_06225 PF09371 Tex-like protein N-terminal domain BXU06_06225 PF16921 Tex protein YqgF-like domain BXU06_06230 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BXU06_06240 PF03466 LysR substrate binding domain BXU06_06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_06245 PF04341 Protein of unknown function, DUF485 BXU06_06250 PF00474 Sodium:solute symporter family BXU06_06255 PF16177 Acetyl-coenzyme A synthetase N-terminus BXU06_06255 PF00501 AMP-binding enzyme BXU06_06255 PF13193 AMP-binding enzyme C-terminal domain BXU06_06260 PF14765 Polyketide synthase dehydratase BXU06_06260 PF00550 Phosphopantetheine attachment site BXU06_06260 PF00698 Acyl transferase domain BXU06_06260 PF16197 Ketoacyl-synthetase C-terminal extension BXU06_06260 PF00109 Beta-ketoacyl synthase, N-terminal domain BXU06_06260 PF08659 KR domain BXU06_06260 PF02801 Beta-ketoacyl synthase, C-terminal domain BXU06_06300 PF01609 Transposase DDE domain BXU06_06300 PF05598 Transposase domain (DUF772) BXU06_06305 PF12697 Alpha/beta hydrolase family BXU06_06310 PF07670 Nucleoside recognition BXU06_06315 PF12729 Four helix bundle sensory module for signal transduction BXU06_06315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_06315 PF00672 HAMP domain BXU06_06330 PF12323 Helix-turn-helix domain BXU06_06330 PF01385 Probable transposase BXU06_06330 PF07282 Putative transposase DNA-binding domain BXU06_06350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BXU06_06350 PF01411 tRNA synthetases class II (A) BXU06_06350 PF02272 DHHA1 domain BXU06_06355 PF01966 HD domain BXU06_06360 PF00300 Histidine phosphatase superfamily (branch 1) BXU06_06365 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BXU06_06380 PF13808 DDE_Tnp_1-associated BXU06_06380 PF01609 Transposase DDE domain BXU06_06390 PF00072 Response regulator receiver domain BXU06_06390 PF04397 LytTr DNA-binding domain BXU06_06395 PF07694 5TMR of 5TMR-LYT BXU06_06395 PF06580 Histidine kinase BXU06_06395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_06415 PF00692 dUTPase BXU06_06420 PF01609 Transposase DDE domain BXU06_06420 PF13808 DDE_Tnp_1-associated BXU06_06425 PF01261 Xylose isomerase-like TIM barrel BXU06_06445 PF01261 Xylose isomerase-like TIM barrel BXU06_06465 PF03795 YCII-related domain BXU06_06470 PF04279 Intracellular septation protein A BXU06_06475 PF00271 Helicase conserved C-terminal domain BXU06_06475 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BXU06_06475 PF04408 Helicase associated domain (HA2) BXU06_06475 PF11898 Domain of unknown function (DUF3418) BXU06_06475 PF00270 DEAD/DEAH box helicase BXU06_06490 PF03454 MoeA C-terminal region (domain IV) BXU06_06490 PF03453 MoeA N-terminal region (domain I and II) BXU06_06490 PF00994 Probable molybdopterin binding domain BXU06_06495 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BXU06_06505 PF01475 Ferric uptake regulator family BXU06_06510 PF07683 Cobalamin synthesis protein cobW C-terminal domain BXU06_06510 PF02492 CobW/HypB/UreG, nucleotide-binding domain BXU06_06515 PF00005 ABC transporter BXU06_06520 PF00950 ABC 3 transport family BXU06_06525 PF01297 Zinc-uptake complex component A periplasmic BXU06_06535 PF01042 Endoribonuclease L-PSP BXU06_06570 PF00266 Aminotransferase class-V BXU06_06580 PF01842 ACT domain BXU06_06580 PF00800 Prephenate dehydratase BXU06_06580 PF01817 Chorismate mutase type II BXU06_06585 PF03641 Possible lysine decarboxylase BXU06_06600 PF00793 DAHP synthetase I family BXU06_06600 PF18152 DAHP synthase ferredoxin-like domain BXU06_06630 PF02583 Metal-sensitive transcriptional repressor BXU06_06640 PF00155 Aminotransferase class I and II BXU06_06645 PF01047 MarR family BXU06_06650 PF00255 Glutathione peroxidase BXU06_06655 PF00085 Thioredoxin BXU06_06660 PF07497 Rho termination factor, RNA-binding domain BXU06_06660 PF07498 Rho termination factor, N-terminal domain BXU06_06660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU06_06670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_06670 PF00672 HAMP domain BXU06_06675 PF03976 Polyphosphate kinase 2 (PPK2) BXU06_06680 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BXU06_06680 PF00749 tRNA synthetases class I (E and Q), catalytic domain BXU06_06690 PF00171 Aldehyde dehydrogenase family BXU06_06700 PF05199 GMC oxidoreductase BXU06_06710 PF00654 Voltage gated chloride channel BXU06_06720 PF00593 TonB dependent receptor BXU06_06720 PF07715 TonB-dependent Receptor Plug Domain BXU06_06730 PF03883 Peroxide stress protein YaaA BXU06_06735 PF01594 AI-2E family transporter BXU06_06740 PF02769 AIR synthase related protein, C-terminal domain BXU06_06740 PF00586 AIR synthase related protein, N-terminal domain BXU06_06745 PF00551 Formyl transferase BXU06_06755 PF01189 16S rRNA methyltransferase RsmB/F BXU06_06755 PF01029 NusB family BXU06_06760 PF00691 OmpA family BXU06_06760 PF05736 OprF membrane domain BXU06_06795 PF13180 PDZ domain BXU06_06795 PF03572 Peptidase family S41 BXU06_06800 PF01551 Peptidase family M23 BXU06_06810 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BXU06_06810 PF01676 Metalloenzyme superfamily BXU06_06820 PF17755 UvrA DNA-binding domain BXU06_06820 PF17760 UvrA interaction domain BXU06_06825 PF07690 Major Facilitator Superfamily BXU06_06830 PF00436 Single-strand binding protein family BXU06_06835 PF16658 Class II release factor RF3, C-terminal domain BXU06_06835 PF03144 Elongation factor Tu domain 2 BXU06_06835 PF00009 Elongation factor Tu GTP binding domain BXU06_06845 PF18331 PKHD-type hydroxylase C-terminal domain BXU06_06845 PF13640 2OG-Fe(II) oxygenase superfamily BXU06_06850 PF07715 TonB-dependent Receptor Plug Domain BXU06_06850 PF00593 TonB dependent receptor BXU06_06855 PF00175 Oxidoreductase NAD-binding domain BXU06_06855 PF00258 Flavodoxin BXU06_06855 PF00667 FAD binding domain BXU06_06880 PF01618 MotA/TolQ/ExbB proton channel family BXU06_06885 PF02472 Biopolymer transport protein ExbD/TolR BXU06_06920 PF03796 DnaB-like helicase C terminal domain BXU06_06920 PF00772 DnaB-like helicase N terminal domain BXU06_06925 PF01427 D-ala-D-ala dipeptidase BXU06_06945 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BXU06_06945 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BXU06_06950 PF00557 Metallopeptidase family M24 BXU06_06955 PF00267 Gram-negative porin BXU06_06970 PF13609 Gram-negative porin BXU06_06975 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BXU06_06975 PF01628 HrcA protein C terminal domain BXU06_06990 PF00154 recA bacterial DNA recombination protein BXU06_06995 PF02631 RecX family BXU06_07000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_07000 PF08447 PAS fold BXU06_07015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_07015 PF16591 Helical bimodular sensor domain BXU06_07015 PF00672 HAMP domain BXU06_07020 PF00117 Glutamine amidotransferase class-I BXU06_07025 PF00591 Glycosyl transferase family, a/b domain BXU06_07025 PF02885 Glycosyl transferase family, helical bundle domain BXU06_07035 PF00920 Dehydratase family BXU06_07045 PF02132 RecR protein BXU06_07045 PF13662 Toprim domain BXU06_07050 PF02575 YbaB/EbfC DNA-binding family BXU06_07055 PF12169 DNA polymerase III subunits gamma and tau domain III BXU06_07055 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BXU06_07055 PF12170 DNA polymerase III tau subunit V interacting with alpha BXU06_07060 PF13406 Transglycosylase SLT domain BXU06_07065 PF01527 Transposase BXU06_07080 PF17757 UvrB interaction domain BXU06_07080 PF12344 Ultra-violet resistance protein B BXU06_07080 PF02151 UvrB/uvrC motif BXU06_07080 PF04851 Type III restriction enzyme, res subunit BXU06_07080 PF00271 Helicase conserved C-terminal domain BXU06_07090 PF04851 Type III restriction enzyme, res subunit BXU06_07090 PF00271 Helicase conserved C-terminal domain BXU06_07090 PF02151 UvrB/uvrC motif BXU06_07090 PF12344 Ultra-violet resistance protein B BXU06_07090 PF17757 UvrB interaction domain BXU06_07095 PF00768 D-alanyl-D-alanine carboxypeptidase BXU06_07100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BXU06_07100 PF00925 GTP cyclohydrolase II BXU06_07105 PF00885 6,7-dimethyl-8-ribityllumazine synthase BXU06_07110 PF01029 NusB family BXU06_07115 PF00012 Hsp70 protein BXU06_07120 PF00175 Oxidoreductase NAD-binding domain BXU06_07120 PF00970 Oxidoreductase FAD-binding domain BXU06_07125 PF00291 Pyridoxal-phosphate dependent enzyme BXU06_07130 PF00749 tRNA synthetases class I (E and Q), catalytic domain BXU06_07160 PF00106 short chain dehydrogenase BXU06_07165 PF04055 Radical SAM superfamily BXU06_07165 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BXU06_07170 PF03099 Biotin/lipoate A/B protein ligase family BXU06_07175 PF04359 Protein of unknown function (DUF493) BXU06_07180 PF07943 Penicillin-binding protein 5, C-terminal domain BXU06_07180 PF00768 D-alanyl-D-alanine carboxypeptidase BXU06_07190 PF00285 Citrate synthase, C-terminal domain BXU06_07195 PF00694 Aconitase C-terminal domain BXU06_07195 PF00330 Aconitase family (aconitate hydratase) BXU06_07200 PF04303 PrpF protein BXU06_07210 PF09905 DNA-binding protein VF530 BXU06_07220 PF01609 Transposase DDE domain BXU06_07220 PF05598 Transposase domain (DUF772) BXU06_07240 PF01479 S4 domain BXU06_07240 PF00579 tRNA synthetases class I (W and Y) BXU06_07250 PF17768 RecJ OB domain BXU06_07250 PF02272 DHHA1 domain BXU06_07250 PF01368 DHH family BXU06_07270 PF00293 NUDIX domain BXU06_07275 PF04324 BFD-like [2Fe-2S] binding domain BXU06_07285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_07285 PF03466 LysR substrate binding domain BXU06_07325 PF12848 ABC transporter BXU06_07325 PF00005 ABC transporter BXU06_07330 PF00990 Diguanylate cyclase, GGDEF domain BXU06_07330 PF17158 Membrane-associated sensor, integral membrane domain BXU06_07335 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_07345 PF00512 His Kinase A (phospho-acceptor) domain BXU06_07345 PF00989 PAS fold BXU06_07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_07350 PF00196 Bacterial regulatory proteins, luxR family BXU06_07350 PF00072 Response regulator receiver domain BXU06_07360 PF01867 CRISPR associated protein Cas1 BXU06_07365 PF09827 CRISPR associated protein Cas2 BXU06_07385 PF03787 RAMP superfamily BXU06_07415 PF00849 RNA pseudouridylate synthase BXU06_07420 PF01243 Pyridoxamine 5'-phosphate oxidase BXU06_07420 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BXU06_07425 PF12704 MacB-like periplasmic core domain BXU06_07425 PF02687 FtsX-like permease family BXU06_07430 PF00005 ABC transporter BXU06_07435 PF12794 Mechanosensitive ion channel inner membrane domain 1 BXU06_07435 PF12795 Mechanosensitive ion channel porin domain BXU06_07435 PF00924 Mechanosensitive ion channel BXU06_07440 PF00072 Response regulator receiver domain BXU06_07440 PF00196 Bacterial regulatory proteins, luxR family BXU06_07450 PF03372 Endonuclease/Exonuclease/phosphatase family BXU06_07455 PF13091 PLD-like domain BXU06_07465 PF00268 Ribonucleotide reductase, small chain BXU06_07470 PF02867 Ribonucleotide reductase, barrel domain BXU06_07470 PF03477 ATP cone domain BXU06_07470 PF00317 Ribonucleotide reductase, all-alpha domain BXU06_07485 PF01979 Amidohydrolase family BXU06_07490 PF08402 TOBE domain BXU06_07490 PF00005 ABC transporter BXU06_07500 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_07505 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_07510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_07510 PF08447 PAS fold BXU06_07510 PF13426 PAS domain BXU06_07520 PF07759 Protein of unknown function (DUF1615) BXU06_07530 PF11740 Plasmid replication region DNA-binding N-term BXU06_07535 PF00589 Phage integrase family BXU06_07535 PF02899 Phage integrase, N-terminal SAM-like domain BXU06_07545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU06_07545 PF02770 Acyl-CoA dehydrogenase, middle domain BXU06_07545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_07545 PF12806 Acetyl-CoA dehydrogenase C-terminal like BXU06_07555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BXU06_07555 PF00005 ABC transporter BXU06_07560 PF00877 NlpC/P60 family BXU06_07580 PF08245 Mur ligase middle domain BXU06_07580 PF02875 Mur ligase family, glutamate ligase domain BXU06_07595 PF00156 Phosphoribosyl transferase domain BXU06_07605 PF07282 Putative transposase DNA-binding domain BXU06_07605 PF01385 Probable transposase BXU06_07605 PF12323 Helix-turn-helix domain BXU06_07610 PF00462 Glutaredoxin BXU06_07610 PF08534 Redoxin BXU06_07615 PF01464 Transglycosylase SLT domain BXU06_07615 PF01551 Peptidase family M23 BXU06_07615 PF10145 Phage-related minor tail protein BXU06_07620 PF13460 NAD(P)H-binding BXU06_07620 PF11066 Protein of unknown function (DUF2867) BXU06_07625 PF01743 Poly A polymerase head domain BXU06_07625 PF12627 Probable RNA and SrmB- binding site of polymerase A BXU06_07625 PF01966 HD domain BXU06_07635 PF03473 MOSC domain BXU06_07635 PF03475 3-alpha domain BXU06_07640 PF03061 Thioesterase superfamily BXU06_07645 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BXU06_07650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BXU06_07650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BXU06_07650 PF00378 Enoyl-CoA hydratase/isomerase BXU06_07655 PF00108 Thiolase, N-terminal domain BXU06_07655 PF02803 Thiolase, C-terminal domain BXU06_07660 PF07282 Putative transposase DNA-binding domain BXU06_07660 PF12323 Helix-turn-helix domain BXU06_07660 PF01385 Probable transposase BXU06_07675 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BXU06_07675 PF14850 DNA-binding domain of Proline dehydrogenase BXU06_07675 PF01619 Proline dehydrogenase BXU06_07675 PF00171 Aldehyde dehydrogenase family BXU06_07685 PF13458 Periplasmic binding protein BXU06_07690 PF02153 Prephenate dehydrogenase BXU06_07690 PF01842 ACT domain BXU06_07700 PF00293 NUDIX domain BXU06_07715 PF00308 Bacterial dnaA protein BXU06_07730 PF00005 ABC transporter BXU06_07740 PF00005 ABC transporter BXU06_07745 PF13533 Biotin-lipoyl like BXU06_07760 PF13808 DDE_Tnp_1-associated BXU06_07760 PF01609 Transposase DDE domain BXU06_07765 PF00593 TonB dependent receptor BXU06_07765 PF07715 TonB-dependent Receptor Plug Domain BXU06_07770 PF01032 FecCD transport family BXU06_07775 PF00005 ABC transporter BXU06_07780 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BXU06_07780 PF12557 Cob(I)alamin adenosyltransferase N terminal BXU06_07785 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BXU06_07785 PF07685 CobB/CobQ-like glutamine amidotransferase domain BXU06_07790 PF17113 Regulatory signalling modulator protein AmpE BXU06_07790 PF03186 CobD/Cbib protein BXU06_07795 PF00155 Aminotransferase class I and II BXU06_07800 PF02583 Metal-sensitive transcriptional repressor BXU06_07810 PF00403 Heavy-metal-associated domain BXU06_07835 PF12911 N-terminal TM domain of oligopeptide transport permease C BXU06_07835 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_07840 PF00990 Diguanylate cyclase, GGDEF domain BXU06_07840 PF00072 Response regulator receiver domain BXU06_07845 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_07850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BXU06_07860 PF02609 Exonuclease VII small subunit BXU06_07865 PF00348 Polyprenyl synthetase BXU06_07870 PF02780 Transketolase, C-terminal domain BXU06_07870 PF02779 Transketolase, pyrimidine binding domain BXU06_07870 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BXU06_07875 PF13194 Domain of unknown function (DUF4010) BXU06_07880 PF18073 Rubredoxin metal binding domain BXU06_07885 PF12697 Alpha/beta hydrolase family BXU06_07895 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BXU06_07900 PF01554 MatE BXU06_07905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BXU06_07905 PF01565 FAD binding domain BXU06_07925 PF07282 Putative transposase DNA-binding domain BXU06_07925 PF12323 Helix-turn-helix domain BXU06_07925 PF01385 Probable transposase BXU06_07930 PF01228 Glycine radical BXU06_07930 PF02901 Pyruvate formate lyase-like BXU06_07940 PF06733 DEAD_2 BXU06_07940 PF13307 Helicase C-terminal domain BXU06_07950 PF07282 Putative transposase DNA-binding domain BXU06_07950 PF12323 Helix-turn-helix domain BXU06_07950 PF01385 Probable transposase BXU06_07955 PF01070 FMN-dependent dehydrogenase BXU06_07960 PF12323 Helix-turn-helix domain BXU06_07960 PF07282 Putative transposase DNA-binding domain BXU06_07960 PF01385 Probable transposase BXU06_07975 PF03707 Bacterial signalling protein N terminal repeat BXU06_07975 PF00563 EAL domain BXU06_07975 PF00990 Diguanylate cyclase, GGDEF domain BXU06_07990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BXU06_07990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BXU06_07990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BXU06_07990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BXU06_07995 PF05175 Methyltransferase small domain BXU06_08005 PF02649 Type I GTP cyclohydrolase folE2 BXU06_08020 PF12323 Helix-turn-helix domain BXU06_08020 PF01385 Probable transposase BXU06_08020 PF07282 Putative transposase DNA-binding domain BXU06_08035 PF01435 Peptidase family M48 BXU06_08050 PF01761 3-dehydroquinate synthase BXU06_08075 PF01040 UbiA prenyltransferase family BXU06_08080 PF00682 HMGL-like BXU06_08080 PF08502 LeuA allosteric (dimerisation) domain BXU06_08085 PF08502 LeuA allosteric (dimerisation) domain BXU06_08085 PF00682 HMGL-like BXU06_08090 PF01618 MotA/TolQ/ExbB proton channel family BXU06_08095 PF04539 Sigma-70 region 3 BXU06_08095 PF04542 Sigma-70 region 2 BXU06_08095 PF04545 Sigma-70, region 4 BXU06_08105 PF00448 SRP54-type protein, GTPase domain BXU06_08110 PF00771 FHIPEP family BXU06_08115 PF01312 FlhB HrpN YscU SpaS Family BXU06_08120 PF00303 Thymidylate synthase BXU06_08125 PF00186 Dihydrofolate reductase BXU06_08130 PF01678 Diaminopimelate epimerase BXU06_08155 PF01176 Translation initiation factor 1A / IF-1 BXU06_08165 PF01842 ACT domain BXU06_08165 PF01966 HD domain BXU06_08165 PF01909 Nucleotidyltransferase domain BXU06_08165 PF08335 GlnD PII-uridylyltransferase BXU06_08170 PF03739 Lipopolysaccharide export system permease LptF/LptG BXU06_08180 PF00883 Cytosol aminopeptidase family, catalytic domain BXU06_08180 PF02789 Cytosol aminopeptidase family, N-terminal domain BXU06_08205 PF00106 short chain dehydrogenase BXU06_08210 PF01593 Flavin containing amine oxidoreductase BXU06_08245 PF03477 ATP cone domain BXU06_08250 PF01872 RibD C-terminal domain BXU06_08250 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BXU06_08265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BXU06_08285 PF02092 Glycyl-tRNA synthetase beta subunit BXU06_08285 PF05746 DALR anticodon binding domain BXU06_08295 PF02091 Glycyl-tRNA synthetase alpha subunit BXU06_08300 PF04430 Protein of unknown function (DUF498/DUF598) BXU06_08305 PF00155 Aminotransferase class I and II BXU06_08310 PF00742 Homoserine dehydrogenase BXU06_08310 PF01842 ACT domain BXU06_08310 PF03447 Homoserine dehydrogenase, NAD binding domain BXU06_08315 PF00291 Pyridoxal-phosphate dependent enzyme BXU06_08315 PF14821 Threonine synthase N terminus BXU06_08345 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BXU06_08345 PF01189 16S rRNA methyltransferase RsmB/F BXU06_08345 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BXU06_08350 PF01541 GIY-YIG catalytic domain BXU06_08350 PF00929 Exonuclease BXU06_08355 PF07282 Putative transposase DNA-binding domain BXU06_08355 PF12323 Helix-turn-helix domain BXU06_08355 PF01385 Probable transposase BXU06_08360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BXU06_08360 PF07685 CobB/CobQ-like glutamine amidotransferase domain BXU06_08365 PF01497 Periplasmic binding protein BXU06_08375 PF16916 Dimerisation domain of Zinc Transporter BXU06_08375 PF01545 Cation efflux family BXU06_08380 PF08281 Sigma-70, region 4 BXU06_08380 PF04542 Sigma-70 region 2 BXU06_08390 PF03109 ABC1 family BXU06_08395 PF00877 NlpC/P60 family BXU06_08405 PF00072 Response regulator receiver domain BXU06_08405 PF00486 Transcriptional regulatory protein, C terminal BXU06_08410 PF00512 His Kinase A (phospho-acceptor) domain BXU06_08410 PF13493 Domain of unknown function (DUF4118) BXU06_08410 PF13492 GAF domain BXU06_08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_08410 PF02702 Osmosensitive K+ channel His kinase sensor domain BXU06_08415 PF02669 K+-transporting ATPase, c chain BXU06_08425 PF03814 Potassium-transporting ATPase A subunit BXU06_08435 PF00990 Diguanylate cyclase, GGDEF domain BXU06_08435 PF13188 PAS domain BXU06_08435 PF00563 EAL domain BXU06_08435 PF03707 Bacterial signalling protein N terminal repeat BXU06_08440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BXU06_08445 PF00425 chorismate binding enzyme BXU06_08445 PF04715 Anthranilate synthase component I, N terminal region BXU06_08470 PF01507 Phosphoadenosine phosphosulfate reductase family BXU06_08475 PF00009 Elongation factor Tu GTP binding domain BXU06_08485 PF00586 AIR synthase related protein, N-terminal domain BXU06_08485 PF02769 AIR synthase related protein, C-terminal domain BXU06_08490 PF01924 Hydrogenase formation hypA family BXU06_08495 PF01455 HupF/HypC family BXU06_08500 PF01541 GIY-YIG catalytic domain BXU06_08505 PF00708 Acylphosphatase BXU06_08505 PF17788 HypF Kae1-like domain BXU06_08505 PF01300 Telomere recombination BXU06_08505 PF07503 HypF finger BXU06_08510 PF02492 CobW/HypB/UreG, nucleotide-binding domain BXU06_08515 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BXU06_08525 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE BXU06_08530 PF00301 Rubredoxin BXU06_08535 PF04809 HupH hydrogenase expression protein, C-terminal conserved region BXU06_08545 PF01455 HupF/HypC family BXU06_08550 PF01750 Hydrogenase maturation protease BXU06_08565 PF13458 Periplasmic binding protein BXU06_08570 PF13458 Periplasmic binding protein BXU06_08575 PF00255 Glutathione peroxidase BXU06_08585 PF00571 CBS domain BXU06_08585 PF00478 IMP dehydrogenase / GMP reductase domain BXU06_08590 PF08459 UvrC Helix-hairpin-helix N-terminal BXU06_08590 PF02151 UvrB/uvrC motif BXU06_08590 PF01541 GIY-YIG catalytic domain BXU06_08595 PF01066 CDP-alcohol phosphatidyltransferase BXU06_08620 PF00563 EAL domain BXU06_08620 PF00990 Diguanylate cyclase, GGDEF domain BXU06_08620 PF03707 Bacterial signalling protein N terminal repeat BXU06_08635 PF02261 Aspartate decarboxylase BXU06_08640 PF02569 Pantoate-beta-alanine ligase BXU06_08645 PF02548 Ketopantoate hydroxymethyltransferase BXU06_08650 PF01712 Deoxynucleoside kinase BXU06_08655 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BXU06_08660 PF12627 Probable RNA and SrmB- binding site of polymerase A BXU06_08660 PF12626 Polymerase A arginine-rich C-terminus BXU06_08660 PF01743 Poly A polymerase head domain BXU06_08670 PF00585 C-terminal regulatory domain of Threonine dehydratase BXU06_08670 PF00291 Pyridoxal-phosphate dependent enzyme BXU06_08675 PF13419 Haloacid dehalogenase-like hydrolase BXU06_08695 PF02803 Thiolase, C-terminal domain BXU06_08695 PF00108 Thiolase, N-terminal domain BXU06_08700 PF00672 HAMP domain BXU06_08700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_08710 PF07282 Putative transposase DNA-binding domain BXU06_08710 PF12323 Helix-turn-helix domain BXU06_08710 PF01385 Probable transposase BXU06_08715 PF00043 Glutathione S-transferase, C-terminal domain BXU06_08715 PF13417 Glutathione S-transferase, N-terminal domain BXU06_08740 PF00753 Metallo-beta-lactamase superfamily BXU06_08745 PF01925 Sulfite exporter TauE/SafE BXU06_08750 PF00581 Rhodanese-like domain BXU06_08760 PF03562 MltA specific insert domain BXU06_08760 PF06725 3D domain BXU06_08765 PF02954 Bacterial regulatory protein, Fis family BXU06_08765 PF01590 GAF domain BXU06_08765 PF00158 Sigma-54 interaction domain BXU06_08785 PF00797 N-acetyltransferase BXU06_08790 PF01965 DJ-1/PfpI family BXU06_08795 PF00892 EamA-like transporter family BXU06_08800 PF12833 Helix-turn-helix domain BXU06_08800 PF14525 AraC-binding-like domain BXU06_08805 PF01161 Phosphatidylethanolamine-binding protein BXU06_08820 PF08447 PAS fold BXU06_08820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_08820 PF13426 PAS domain BXU06_08830 PF03949 Malic enzyme, NAD binding domain BXU06_08830 PF00390 Malic enzyme, N-terminal domain BXU06_08830 PF01515 Phosphate acetyl/butaryl transferase BXU06_08835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BXU06_08840 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BXU06_08845 PF03480 Bacterial extracellular solute-binding protein, family 7 BXU06_08850 PF01209 ubiE/COQ5 methyltransferase family BXU06_08855 PF01588 Putative tRNA binding domain BXU06_08855 PF09334 tRNA synthetases class I (M) BXU06_08855 PF08264 Anticodon-binding domain of tRNA BXU06_08860 PF10609 NUBPL iron-transfer P-loop NTPase BXU06_08865 PF00291 Pyridoxal-phosphate dependent enzyme BXU06_08880 PF00875 DNA photolyase BXU06_08880 PF03441 FAD binding domain of DNA photolyase BXU06_08885 PF03458 UPF0126 domain BXU06_08935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_08935 PF03466 LysR substrate binding domain BXU06_08960 PF09587 Bacterial capsule synthesis protein PGA_cap BXU06_08975 PF02600 Disulfide bond formation protein DsbB BXU06_08980 PF12833 Helix-turn-helix domain BXU06_08980 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU06_08980 PF06029 AlkA N-terminal domain BXU06_08980 PF02805 Metal binding domain of Ada BXU06_08985 PF01523 Putative modulator of DNA gyrase BXU06_08990 PF04751 Protein of unknown function (DUF615) BXU06_08995 PF00994 Probable molybdopterin binding domain BXU06_09000 PF00561 alpha/beta hydrolase fold BXU06_09005 PF00218 Indole-3-glycerol phosphate synthase BXU06_09015 PF04608 Phosphatidylglycerophosphatase A BXU06_09020 PF02769 AIR synthase related protein, C-terminal domain BXU06_09020 PF00586 AIR synthase related protein, N-terminal domain BXU06_09030 PF12419 SNF2 Helicase protein BXU06_09030 PF00271 Helicase conserved C-terminal domain BXU06_09030 PF00176 SNF2 family N-terminal domain BXU06_09035 PF08402 TOBE domain BXU06_09035 PF00005 ABC transporter BXU06_09040 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_09060 PF00676 Dehydrogenase E1 component BXU06_09065 PF02780 Transketolase, C-terminal domain BXU06_09065 PF02779 Transketolase, pyrimidine binding domain BXU06_09070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BXU06_09070 PF02817 e3 binding domain BXU06_09070 PF00364 Biotin-requiring enzyme BXU06_09075 PF00155 Aminotransferase class I and II BXU06_09075 PF00392 Bacterial regulatory proteins, gntR family BXU06_09090 PF13676 TIR domain BXU06_09095 PF01274 Malate synthase BXU06_09115 PF00300 Histidine phosphatase superfamily (branch 1) BXU06_09120 PF04172 LrgB-like family BXU06_09130 PF00472 RF-1 domain BXU06_09135 PF04345 Chorismate lyase BXU06_09140 PF01040 UbiA prenyltransferase family BXU06_09150 PF00293 NUDIX domain BXU06_09150 PF09297 NADH pyrophosphatase zinc ribbon domain BXU06_09160 PF01171 PP-loop family BXU06_09160 PF09179 TilS substrate binding domain BXU06_09160 PF11734 TilS substrate C-terminal domain BXU06_09165 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BXU06_09195 PF01546 Peptidase family M20/M25/M40 BXU06_09195 PF07687 Peptidase dimerisation domain BXU06_09200 PF00005 ABC transporter BXU06_09200 PF00664 ABC transporter transmembrane region BXU06_09205 PF04379 ApaG domain BXU06_09220 PF00005 ABC transporter BXU06_09225 PF00005 ABC transporter BXU06_09225 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_09230 PF11862 Domain of unknown function (DUF3382) BXU06_09230 PF02653 Branched-chain amino acid transport system / permease component BXU06_09235 PF02653 Branched-chain amino acid transport system / permease component BXU06_09240 PF04958 Arginine N-succinyltransferase beta subunit BXU06_09245 PF04958 Arginine N-succinyltransferase beta subunit BXU06_09275 PF09278 MerR, DNA binding BXU06_09275 PF00376 MerR family regulatory protein BXU06_09280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU06_09280 PF02770 Acyl-CoA dehydrogenase, middle domain BXU06_09280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_09285 PF01039 Carboxyl transferase domain BXU06_09290 PF00378 Enoyl-CoA hydratase/isomerase BXU06_09295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BXU06_09295 PF00364 Biotin-requiring enzyme BXU06_09295 PF00289 Biotin carboxylase, N-terminal domain BXU06_09295 PF02785 Biotin carboxylase C-terminal domain BXU06_09300 PF00682 HMGL-like BXU06_09310 PF00501 AMP-binding enzyme BXU06_09310 PF13193 AMP-binding enzyme C-terminal domain BXU06_09320 PF00392 Bacterial regulatory proteins, gntR family BXU06_09320 PF00155 Aminotransferase class I and II BXU06_09325 PF13746 4Fe-4S dicluster domain BXU06_09325 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BXU06_09325 PF12801 4Fe-4S binding domain BXU06_09330 PF01207 Dihydrouridine synthase (Dus) BXU06_09335 PF01725 Ham1 family BXU06_09340 PF06969 HemN C-terminal domain BXU06_09340 PF04055 Radical SAM superfamily BXU06_09345 PF00440 Bacterial regulatory proteins, tetR family BXU06_09355 PF07702 UTRA domain BXU06_09355 PF00392 Bacterial regulatory proteins, gntR family BXU06_09370 PF00005 ABC transporter BXU06_09370 PF08402 TOBE domain BXU06_09375 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_09380 PF00266 Aminotransferase class-V BXU06_09390 PF01266 FAD dependent oxidoreductase BXU06_09395 PF13426 PAS domain BXU06_09395 PF00672 HAMP domain BXU06_09395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_09410 PF00692 dUTPase BXU06_09420 PF13302 Acetyltransferase (GNAT) domain BXU06_09435 PF00464 Serine hydroxymethyltransferase BXU06_09450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_09450 PF08447 PAS fold BXU06_09460 PF00106 short chain dehydrogenase BXU06_09465 PF05532 CsbD-like BXU06_09470 PF03193 RsgA GTPase BXU06_09475 PF01435 Peptidase family M48 BXU06_09480 PF00929 Exonuclease BXU06_09485 PF00005 ABC transporter BXU06_09505 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_09505 PF00005 ABC transporter BXU06_09515 PF00296 Luciferase-like monooxygenase BXU06_09525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_09525 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BXU06_09530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_09530 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BXU06_09535 PF00158 Sigma-54 interaction domain BXU06_09545 PF12833 Helix-turn-helix domain BXU06_09545 PF01965 DJ-1/PfpI family BXU06_09550 PF00857 Isochorismatase family BXU06_09555 PF03725 3' exoribonuclease family, domain 2 BXU06_09555 PF01138 3' exoribonuclease family, domain 1 BXU06_09560 PF03755 YicC-like family, N-terminal region BXU06_09560 PF08340 Domain of unknown function (DUF1732) BXU06_09570 PF13472 GDSL-like Lipase/Acylhydrolase family BXU06_09575 PF00005 ABC transporter BXU06_09595 PF00575 S1 RNA binding domain BXU06_09595 PF00773 RNB domain BXU06_09595 PF08206 Ribonuclease B OB domain BXU06_09595 PF08461 Ribonuclease R winged-helix domain BXU06_09595 PF17876 Cold shock domain BXU06_09600 PF00199 Catalase BXU06_09600 PF06628 Catalase-related immune-responsive BXU06_09610 PF03544 Gram-negative bacterial TonB protein C-terminal BXU06_09615 PF01618 MotA/TolQ/ExbB proton channel family BXU06_09620 PF02472 Biopolymer transport protein ExbD/TolR BXU06_09625 PF00593 TonB dependent receptor BXU06_09625 PF07715 TonB-dependent Receptor Plug Domain BXU06_09630 PF18331 PKHD-type hydroxylase C-terminal domain BXU06_09630 PF13640 2OG-Fe(II) oxygenase superfamily BXU06_09635 PF01609 Transposase DDE domain BXU06_09635 PF13808 DDE_Tnp_1-associated BXU06_09645 PF00873 AcrB/AcrD/AcrF family BXU06_09665 PF13180 PDZ domain BXU06_09670 PF00072 Response regulator receiver domain BXU06_09675 PF18415 Histidine kinase receptor ArcB trans-membrane domain BXU06_09675 PF01627 Hpt domain BXU06_09675 PF00989 PAS fold BXU06_09675 PF00512 His Kinase A (phospho-acceptor) domain BXU06_09675 PF00072 Response regulator receiver domain BXU06_09675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_09680 PF02660 Glycerol-3-phosphate acyltransferase BXU06_09685 PF02152 Dihydroneopterin aldolase BXU06_09690 PF01406 tRNA synthetases class I (C) catalytic domain BXU06_09690 PF09190 DALR domain BXU06_09705 PF00460 Flagella basal body rod protein BXU06_09705 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU06_09710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BXU06_09710 PF10135 Rod binding protein BXU06_09715 PF02119 Flagellar P-ring protein BXU06_09720 PF02107 Flagellar L-ring protein BXU06_09725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU06_09725 PF00460 Flagella basal body rod protein BXU06_09730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU06_09730 PF00460 Flagella basal body rod protein BXU06_09735 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU06_09735 PF07559 Flagellar basal body protein FlaE BXU06_09735 PF00460 Flagella basal body rod protein BXU06_09740 PF13861 FlgD Tudor-like domain BXU06_09740 PF13860 FlgD Ig-like domain BXU06_09740 PF03963 Flagellar hook capping protein - N-terminal region BXU06_09745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BXU06_09745 PF00460 Flagella basal body rod protein BXU06_09750 PF00460 Flagella basal body rod protein BXU06_09760 PF02421 Ferrous iron transport protein B BXU06_09760 PF07664 Ferrous iron transport protein B C terminus BXU06_09760 PF07670 Nucleoside recognition BXU06_09770 PF01925 Sulfite exporter TauE/SafE BXU06_09795 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BXU06_09795 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_09795 PF14602 Hexapeptide repeat of succinyl-transferase BXU06_09800 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BXU06_09805 PF08484 C-methyltransferase C-terminal domain BXU06_09805 PF08421 Putative zinc binding domain BXU06_09810 PF16363 GDP-mannose 4,6 dehydratase BXU06_09815 PF00483 Nucleotidyl transferase BXU06_09830 PF00700 Bacterial flagellin C-terminal helical region BXU06_09830 PF07196 Flagellin hook IN motif BXU06_09830 PF00669 Bacterial flagellin N-terminal helical region BXU06_09835 PF00669 Bacterial flagellin N-terminal helical region BXU06_09835 PF00700 Bacterial flagellin C-terminal helical region BXU06_09850 PF02561 Flagellar protein FliS BXU06_09875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BXU06_09875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BXU06_09895 PF01385 Probable transposase BXU06_09895 PF12323 Helix-turn-helix domain BXU06_09895 PF07282 Putative transposase DNA-binding domain BXU06_09900 PF01769 Divalent cation transporter BXU06_09900 PF03448 MgtE intracellular N domain BXU06_09900 PF00571 CBS domain BXU06_09905 PF17827 PrmC N-terminal domain BXU06_09905 PF05175 Methyltransferase small domain BXU06_09910 PF00860 Permease family BXU06_09915 PF06463 Molybdenum Cofactor Synthesis C BXU06_09915 PF04055 Radical SAM superfamily BXU06_09925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_09925 PF03466 LysR substrate binding domain BXU06_09930 PF08447 PAS fold BXU06_09930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_09940 PF08447 PAS fold BXU06_09940 PF13426 PAS domain BXU06_09940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_09950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_09950 PF08447 PAS fold BXU06_09955 PF01327 Polypeptide deformylase BXU06_09960 PF01048 Phosphorylase superfamily BXU06_09970 PF13193 AMP-binding enzyme C-terminal domain BXU06_09970 PF00501 AMP-binding enzyme BXU06_09975 PF03167 Uracil DNA glycosylase superfamily BXU06_09985 PF00814 Glycoprotease family BXU06_09990 PF13426 PAS domain BXU06_09990 PF08447 PAS fold BXU06_09990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_09995 PF02601 Exonuclease VII, large subunit BXU06_09995 PF13742 OB-fold nucleic acid binding domain BXU06_10000 PF01618 MotA/TolQ/ExbB proton channel family BXU06_10005 PF02472 Biopolymer transport protein ExbD/TolR BXU06_10010 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BXU06_10015 PF03966 Trm112p-like protein BXU06_10020 PF02348 Cytidylyltransferase BXU06_10025 PF05191 Adenylate kinase, active site lid BXU06_10030 PF00365 Phosphofructokinase BXU06_10045 PF00175 Oxidoreductase NAD-binding domain BXU06_10045 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_10045 PF00970 Oxidoreductase FAD-binding domain BXU06_10050 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_10050 PF17862 AAA+ lid domain BXU06_10050 PF01434 Peptidase family M41 BXU06_10080 PF01625 Peptide methionine sulfoxide reductase BXU06_10085 PF00850 Histone deacetylase domain BXU06_10090 PF01207 Dihydrouridine synthase (Dus) BXU06_10095 PF01451 Low molecular weight phosphotyrosine protein phosphatase BXU06_10100 PF00563 EAL domain BXU06_10100 PF03707 Bacterial signalling protein N terminal repeat BXU06_10100 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10105 PF01339 CheB methylesterase BXU06_10105 PF00072 Response regulator receiver domain BXU06_10110 PF00158 Sigma-54 interaction domain BXU06_10110 PF00072 Response regulator receiver domain BXU06_10110 PF02954 Bacterial regulatory protein, Fis family BXU06_10115 PF02049 Flagellar hook-basal body complex protein FliE BXU06_10120 PF08345 Flagellar M-ring protein C-terminal BXU06_10120 PF01514 Secretory protein of YscJ/FliF family BXU06_10125 PF14842 FliG N-terminal domain BXU06_10125 PF14841 FliG middle domain BXU06_10125 PF01706 FliG C-terminal domain BXU06_10135 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU06_10135 PF18269 T3SS EscN ATPase C-terminal domain BXU06_10155 PF02154 Flagellar motor switch protein FliM BXU06_10155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BXU06_10160 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BXU06_10160 PF16973 Flagellar motor switch protein FliN N-terminal BXU06_10165 PF04347 Flagellar biosynthesis protein, FliO BXU06_10170 PF00813 FliP family BXU06_10175 PF01313 Bacterial export proteins, family 3 BXU06_10180 PF01311 Bacterial export proteins, family 1 BXU06_10185 PF01709 Transcriptional regulator BXU06_10190 PF00557 Metallopeptidase family M24 BXU06_10190 PF05195 Aminopeptidase P, N-terminal domain BXU06_10195 PF01494 FAD binding domain BXU06_10200 PF01494 FAD binding domain BXU06_10230 PF00665 Integrase core domain BXU06_10230 PF13333 Integrase core domain BXU06_10230 PF13276 HTH-like domain BXU06_10235 PF01527 Transposase BXU06_10240 PF01556 DnaJ C terminal domain BXU06_10240 PF00226 DnaJ domain BXU06_10240 PF00684 DnaJ central domain BXU06_10245 PF00012 Hsp70 protein BXU06_10250 PF01025 GrpE BXU06_10255 PF00463 Isocitrate lyase family BXU06_10260 PF08448 PAS fold BXU06_10260 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10270 PF00717 Peptidase S24-like BXU06_10280 PF00672 HAMP domain BXU06_10280 PF02743 Cache domain BXU06_10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_10285 PF00909 Ammonium Transporter Family BXU06_10300 PF07733 Bacterial DNA polymerase III alpha NTPase domain BXU06_10300 PF01336 OB-fold nucleic acid binding domain BXU06_10300 PF02811 PHP domain BXU06_10300 PF14579 Helix-hairpin-helix motif BXU06_10300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BXU06_10310 PF13746 4Fe-4S dicluster domain BXU06_10310 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BXU06_10310 PF12801 4Fe-4S binding domain BXU06_10315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU06_10315 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BXU06_10330 PF00115 Cytochrome C and Quinol oxidase polypeptide I BXU06_10340 PF11940 Domain of unknown function (DUF3458) Ig-like fold BXU06_10340 PF01433 Peptidase family M1 domain BXU06_10340 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BXU06_10345 PF06779 Uncharacterised MFS-type transporter YbfB BXU06_10370 PF04216 Protein involved in formate dehydrogenase formation BXU06_10375 PF02634 FdhD/NarQ family BXU06_10380 PF01292 Prokaryotic cytochrome b561 BXU06_10385 PF13247 4Fe-4S dicluster domain BXU06_10385 PF12800 4Fe-4S binding domain BXU06_10385 PF09163 Formate dehydrogenase N, transmembrane BXU06_10390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BXU06_10390 PF00384 Molybdopterin oxidoreductase BXU06_10390 PF01568 Molydopterin dinucleotide binding domain BXU06_10400 PF01842 ACT domain BXU06_10400 PF00551 Formyl transferase BXU06_10405 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BXU06_10405 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BXU06_10435 PF00575 S1 RNA binding domain BXU06_10435 PF10150 Ribonuclease E/G family BXU06_10435 PF12111 Polyribonucleotide phosphorylase C terminal BXU06_10440 PF01479 S4 domain BXU06_10440 PF00849 RNA pseudouridylate synthase BXU06_10445 PF13419 Haloacid dehalogenase-like hydrolase BXU06_10455 PF06965 Na+/H+ antiporter 1 BXU06_10455 PF01343 Peptidase family S49 BXU06_10460 PF13677 Membrane MotB of proton-channel complex MotA/MotB BXU06_10460 PF00691 OmpA family BXU06_10465 PF14403 Circularly permuted ATP-grasp type 2 BXU06_10470 PF14403 Circularly permuted ATP-grasp type 2 BXU06_10470 PF04168 A predicted alpha-helical domain with a conserved ER motif. BXU06_10485 PF01180 Dihydroorotate dehydrogenase BXU06_10490 PF04377 Arginine-tRNA-protein transferase, C terminus BXU06_10490 PF04376 Arginine-tRNA-protein transferase, N terminus BXU06_10495 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BXU06_10500 PF01475 Ferric uptake regulator family BXU06_10505 PF04355 SmpA / OmlA family BXU06_10510 PF01113 Dihydrodipicolinate reductase, N-terminus BXU06_10510 PF05173 Dihydrodipicolinate reductase, C-terminus BXU06_10515 PF00133 tRNA synthetases class I (I, L, M and V) BXU06_10515 PF13603 Leucyl-tRNA synthetase, Domain 2 BXU06_10515 PF08264 Anticodon-binding domain of tRNA BXU06_10515 PF09334 tRNA synthetases class I (M) BXU06_10520 PF04390 Lipopolysaccharide-assembly BXU06_10525 PF06144 DNA polymerase III, delta subunit BXU06_10525 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BXU06_10535 PF12848 ABC transporter BXU06_10535 PF00005 ABC transporter BXU06_10540 PF00701 Dihydrodipicolinate synthetase family BXU06_10545 PF06804 NlpB/DapX lipoprotein BXU06_10555 PF08007 Cupin superfamily protein BXU06_10560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU06_10565 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10565 PF00563 EAL domain BXU06_10565 PF03707 Bacterial signalling protein N terminal repeat BXU06_10570 PF02803 Thiolase, C-terminal domain BXU06_10570 PF00108 Thiolase, N-terminal domain BXU06_10575 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BXU06_10580 PF03547 Membrane transport protein BXU06_10590 PF00512 His Kinase A (phospho-acceptor) domain BXU06_10590 PF02743 Cache domain BXU06_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_10595 PF02954 Bacterial regulatory protein, Fis family BXU06_10595 PF00072 Response regulator receiver domain BXU06_10595 PF00158 Sigma-54 interaction domain BXU06_10600 PF01797 Transposase IS200 like BXU06_10605 PF00563 EAL domain BXU06_10605 PF13188 PAS domain BXU06_10605 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10605 PF03707 Bacterial signalling protein N terminal repeat BXU06_10610 PF01741 Large-conductance mechanosensitive channel, MscL BXU06_10615 PF00989 PAS fold BXU06_10615 PF00512 His Kinase A (phospho-acceptor) domain BXU06_10615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_10620 PF14437 MafB19-like deaminase BXU06_10625 PF17969 L,D-transpeptidase C-terminal domain BXU06_10625 PF03734 L,D-transpeptidase catalytic domain BXU06_10635 PF00578 AhpC/TSA family BXU06_10645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_10645 PF17200 Single Cache domain 2 BXU06_10645 PF00672 HAMP domain BXU06_10650 PF05681 Fumarate hydratase (Fumerase) BXU06_10650 PF05683 Fumarase C-terminus BXU06_10690 PF00890 FAD binding domain BXU06_10690 PF02910 Fumarate reductase flavoprotein C-term BXU06_10700 PF01177 Asp/Glu/Hydantoin racemase BXU06_10705 PF08331 Domain of unknown function (DUF1730) BXU06_10710 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BXU06_10715 PF01520 N-acetylmuramoyl-L-alanine amidase BXU06_10715 PF11741 AMIN domain BXU06_10720 PF00905 Penicillin binding protein transpeptidase domain BXU06_10720 PF00912 Transglycosylase BXU06_10720 PF17092 Penicillin-binding protein OB-like domain BXU06_10725 PF01202 Shikimate kinase BXU06_10730 PF01761 3-dehydroquinate synthase BXU06_10740 PF01026 TatD related DNase BXU06_10745 PF03023 Lipid II flippase MurJ BXU06_10750 PF01649 Ribosomal protein S20 BXU06_10755 PF01571 Aminomethyltransferase folate-binding domain BXU06_10760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_10760 PF08447 PAS fold BXU06_10760 PF13426 PAS domain BXU06_10780 PF02503 Polyphosphate kinase middle domain BXU06_10780 PF13090 Polyphosphate kinase C-terminal domain 2 BXU06_10780 PF13089 Polyphosphate kinase N-terminal domain BXU06_10780 PF17941 Polyphosphate kinase C-terminal domain 1 BXU06_10785 PF04362 Bacterial Fe(2+) trafficking BXU06_10795 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BXU06_10795 PF00722 Glycosyl hydrolases family 16 BXU06_10800 PF08267 Cobalamin-independent synthase, N-terminal domain BXU06_10800 PF01717 Cobalamin-independent synthase, Catalytic domain BXU06_10805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_10805 PF03466 LysR substrate binding domain BXU06_10810 PF05981 CreA protein BXU06_10815 PF00563 EAL domain BXU06_10815 PF03707 Bacterial signalling protein N terminal repeat BXU06_10815 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10820 PF02203 Tar ligand binding domain homologue BXU06_10820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_10820 PF00672 HAMP domain BXU06_10825 PF10518 TAT (twin-arginine translocation) pathway signal sequence BXU06_10825 PF07732 Multicopper oxidase BXU06_10825 PF07731 Multicopper oxidase BXU06_10825 PF00394 Multicopper oxidase BXU06_10835 PF00588 SpoU rRNA Methylase family BXU06_10835 PF08032 RNA 2'-O ribose methyltransferase substrate binding BXU06_10845 PF00873 AcrB/AcrD/AcrF family BXU06_10865 PF00486 Transcriptional regulatory protein, C terminal BXU06_10865 PF00072 Response regulator receiver domain BXU06_10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_10870 PF00672 HAMP domain BXU06_10870 PF00512 His Kinase A (phospho-acceptor) domain BXU06_10875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_10875 PF08447 PAS fold BXU06_10880 PF00563 EAL domain BXU06_10880 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10880 PF03707 Bacterial signalling protein N terminal repeat BXU06_10885 PF01385 Probable transposase BXU06_10885 PF07282 Putative transposase DNA-binding domain BXU06_10885 PF12323 Helix-turn-helix domain BXU06_10905 PF01370 NAD dependent epimerase/dehydratase family BXU06_10910 PF00294 pfkB family carbohydrate kinase BXU06_10915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BXU06_10915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BXU06_10915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BXU06_10920 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BXU06_10945 PF01169 Uncharacterized protein family UPF0016 BXU06_10950 PF00471 Ribosomal protein L33 BXU06_10955 PF00830 Ribosomal L28 family BXU06_10960 PF00117 Glutamine amidotransferase class-I BXU06_10960 PF06418 CTP synthase N-terminus BXU06_10965 PF00793 DAHP synthetase I family BXU06_10970 PF00113 Enolase, C-terminal TIM barrel domain BXU06_10970 PF03952 Enolase, N-terminal domain BXU06_10975 PF04977 Septum formation initiator BXU06_10980 PF00990 Diguanylate cyclase, GGDEF domain BXU06_10985 PF03658 RnfH family Ubiquitin BXU06_10990 PF03364 Polyketide cyclase / dehydrase and lipid transport BXU06_10995 PF00270 DEAD/DEAH box helicase BXU06_10995 PF00271 Helicase conserved C-terminal domain BXU06_10995 PF17191 RecG wedge domain BXU06_11005 PF00375 Sodium:dicarboxylate symporter family BXU06_11010 PF02567 Phenazine biosynthesis-like protein BXU06_11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_11015 PF03466 LysR substrate binding domain BXU06_11020 PF00216 Bacterial DNA-binding protein BXU06_11025 PF00575 S1 RNA binding domain BXU06_11030 PF02224 Cytidylate kinase BXU06_11040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BXU06_11045 PF02401 LytB protein BXU06_11050 PF01252 Signal peptidase (SPase) II BXU06_11055 PF08264 Anticodon-binding domain of tRNA BXU06_11055 PF00133 tRNA synthetases class I (I, L, M and V) BXU06_11055 PF06827 Zinc finger found in FPG and IleRS BXU06_11060 PF01687 Riboflavin kinase BXU06_11060 PF06574 FAD synthetase BXU06_11065 PF00691 OmpA family BXU06_11075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BXU06_11075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BXU06_11080 PF01507 Phosphoadenosine phosphosulfate reductase family BXU06_11085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_11085 PF03466 LysR substrate binding domain BXU06_11095 PF10414 Sirohaem synthase dimerisation region BXU06_11095 PF14824 Sirohaem biosynthesis protein central BXU06_11095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU06_11100 PF00034 Cytochrome c BXU06_11105 PF00115 Cytochrome C and Quinol oxidase polypeptide I BXU06_11110 PF00510 Cytochrome c oxidase subunit III BXU06_11120 PF07728 AAA domain (dynein-related subfamily) BXU06_11120 PF08406 CbbQ/NirQ/NorQ C-terminal BXU06_11135 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU06_11140 PF00034 Cytochrome c BXU06_11145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU06_11160 PF17805 AsnC-like ligand binding domain BXU06_11170 PF06463 Molybdenum Cofactor Synthesis C BXU06_11170 PF04055 Radical SAM superfamily BXU06_11175 PF00672 HAMP domain BXU06_11175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_11190 PF00027 Cyclic nucleotide-binding domain BXU06_11190 PF13545 Crp-like helix-turn-helix domain BXU06_11200 PF00267 Gram-negative porin BXU06_11205 PF00501 AMP-binding enzyme BXU06_11205 PF13193 AMP-binding enzyme C-terminal domain BXU06_11210 PF03449 Transcription elongation factor, N-terminal BXU06_11210 PF01272 Transcription elongation factor, GreA/GreB, C-term BXU06_11220 PF04079 Segregation and condensation complex subunit ScpB BXU06_11225 PF00719 Inorganic pyrophosphatase BXU06_11230 PF03232 Ubiquinone biosynthesis protein COQ7 BXU06_11235 PF00490 Delta-aminolevulinic acid dehydratase BXU06_11245 PF03775 Septum formation inhibitor MinC, C-terminal domain BXU06_11245 PF05209 Septum formation inhibitor MinC, N-terminal domain BXU06_11250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BXU06_11255 PF03776 Septum formation topological specificity factor MinE BXU06_11260 PF03466 LysR substrate binding domain BXU06_11260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_11265 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_11265 PF18113 Rubredoxin binding C-terminal domain BXU06_11280 PF00730 HhH-GPD superfamily base excision DNA repair protein BXU06_11280 PF00633 Helix-hairpin-helix motif BXU06_11280 PF14815 NUDIX domain BXU06_11285 PF00166 Chaperonin 10 Kd subunit BXU06_11290 PF00118 TCP-1/cpn60 chaperonin family BXU06_11295 PF01784 NIF3 (NGG1p interacting factor 3) BXU06_11300 PF00355 Rieske [2Fe-2S] domain BXU06_11300 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BXU06_11305 PF00033 Cytochrome b/b6/petB BXU06_11305 PF00032 Cytochrome b(C-terminal)/b6/petD BXU06_11310 PF02167 Cytochrome C1 family BXU06_11315 PF00043 Glutathione S-transferase, C-terminal domain BXU06_11315 PF02798 Glutathione S-transferase, N-terminal domain BXU06_11320 PF04386 Stringent starvation protein B BXU06_11325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BXU06_11325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BXU06_11325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BXU06_11325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BXU06_11330 PF00809 Pterin binding enzyme BXU06_11335 PF17862 AAA+ lid domain BXU06_11335 PF06480 FtsH Extracellular BXU06_11335 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_11335 PF01434 Peptidase family M41 BXU06_11340 PF01728 FtsJ-like methyltransferase BXU06_11345 PF01985 CRS1 / YhbY (CRM) domain BXU06_11355 PF01272 Transcription elongation factor, GreA/GreB, C-term BXU06_11355 PF03449 Transcription elongation factor, N-terminal BXU06_11360 PF02142 MGS-like domain BXU06_11360 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BXU06_11360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BXU06_11365 PF01810 LysE type translocator BXU06_11370 PF00117 Glutamine amidotransferase class-I BXU06_11370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BXU06_11375 PF02463 RecF/RecN/SMC N terminal domain BXU06_11390 PF01613 Flavin reductase like domain BXU06_11405 PF01385 Probable transposase BXU06_11405 PF07282 Putative transposase DNA-binding domain BXU06_11405 PF12323 Helix-turn-helix domain BXU06_11420 PF12806 Acetyl-CoA dehydrogenase C-terminal like BXU06_11420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BXU06_11420 PF02770 Acyl-CoA dehydrogenase, middle domain BXU06_11420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BXU06_11425 PF00766 Electron transfer flavoprotein FAD-binding domain BXU06_11425 PF01012 Electron transfer flavoprotein domain BXU06_11430 PF01012 Electron transfer flavoprotein domain BXU06_11435 PF01575 MaoC like domain BXU06_11445 PF00756 Putative esterase BXU06_11450 PF08240 Alcohol dehydrogenase GroES-like domain BXU06_11450 PF00107 Zinc-binding dehydrogenase BXU06_11455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_11455 PF03466 LysR substrate binding domain BXU06_11470 PF00005 ABC transporter BXU06_11470 PF09383 NIL domain BXU06_11475 PF02405 Permease MlaE BXU06_11480 PF04305 Protein of unknown function (DUF455) BXU06_11485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BXU06_11485 PF00391 PEP-utilising enzyme, mobile domain BXU06_11485 PF02896 PEP-utilising enzyme, TIM barrel domain BXU06_11490 PF03618 Kinase/pyrophosphorylase BXU06_11495 PF08497 Radical SAM N-terminal BXU06_11495 PF11842 Domain of unknown function (DUF3362) BXU06_11495 PF04055 Radical SAM superfamily BXU06_11525 PF00472 RF-1 domain BXU06_11525 PF03462 PCRF domain BXU06_11530 PF01336 OB-fold nucleic acid binding domain BXU06_11530 PF00152 tRNA synthetases class II (D, K and N) BXU06_11550 PF00440 Bacterial regulatory proteins, tetR family BXU06_11550 PF08361 MAATS-type transcriptional repressor, C-terminal region BXU06_11555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU06_11560 PF00873 AcrB/AcrD/AcrF family BXU06_11565 PF02321 Outer membrane efflux protein BXU06_11570 PF00210 Ferritin-like domain BXU06_11575 PF00210 Ferritin-like domain BXU06_11580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BXU06_11580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BXU06_11585 PF16925 Tetracyclin repressor-like, C-terminal domain BXU06_11585 PF00440 Bacterial regulatory proteins, tetR family BXU06_11590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BXU06_11605 PF00672 HAMP domain BXU06_11605 PF02743 Cache domain BXU06_11605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_11610 PF01757 Acyltransferase family BXU06_11635 PF01171 PP-loop family BXU06_11645 PF16363 GDP-mannose 4,6 dehydratase BXU06_11665 PF00171 Aldehyde dehydrogenase family BXU06_11670 PF03060 Nitronate monooxygenase BXU06_11680 PF13426 PAS domain BXU06_11680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_11680 PF08447 PAS fold BXU06_11685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_11685 PF00672 HAMP domain BXU06_11685 PF17200 Single Cache domain 2 BXU06_11690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_11690 PF13426 PAS domain BXU06_11690 PF08447 PAS fold BXU06_11695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_11695 PF00672 HAMP domain BXU06_11700 PF01467 Cytidylyltransferase-like BXU06_11705 PF17764 3′ DNA-binding domain (3′BD) BXU06_11705 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BXU06_11705 PF00271 Helicase conserved C-terminal domain BXU06_11705 PF00270 DEAD/DEAH box helicase BXU06_11705 PF18074 Primosomal protein N C-terminal domain BXU06_11710 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BXU06_11720 PF00462 Glutaredoxin BXU06_11725 PF02556 Preprotein translocase subunit SecB BXU06_11735 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BXU06_11735 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BXU06_11740 PF00710 Asparaginase, N-terminal BXU06_11740 PF17763 Glutaminase/Asparaginase C-terminal domain BXU06_11750 PF01925 Sulfite exporter TauE/SafE BXU06_11765 PF05164 Cell division protein ZapA BXU06_11775 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BXU06_11795 PF01648 4'-phosphopantetheinyl transferase superfamily BXU06_11795 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BXU06_11800 PF13193 AMP-binding enzyme C-terminal domain BXU06_11800 PF00501 AMP-binding enzyme BXU06_11805 PF00668 Condensation domain BXU06_11805 PF00550 Phosphopantetheine attachment site BXU06_11805 PF00501 AMP-binding enzyme BXU06_11805 PF13193 AMP-binding enzyme C-terminal domain BXU06_11810 PF00501 AMP-binding enzyme BXU06_11810 PF13193 AMP-binding enzyme C-terminal domain BXU06_11810 PF00668 Condensation domain BXU06_11810 PF00975 Thioesterase domain BXU06_11810 PF00550 Phosphopantetheine attachment site BXU06_11815 PF00975 Thioesterase domain BXU06_11830 PF04954 Siderophore-interacting protein BXU06_11830 PF08021 Siderophore-interacting FAD-binding domain BXU06_11830 PF00005 ABC transporter BXU06_11830 PF00664 ABC transporter transmembrane region BXU06_11835 PF00593 TonB dependent receptor BXU06_11835 PF07715 TonB-dependent Receptor Plug Domain BXU06_11840 PF00873 AcrB/AcrD/AcrF family BXU06_11850 PF00593 TonB dependent receptor BXU06_11850 PF07715 TonB-dependent Receptor Plug Domain BXU06_11855 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BXU06_11855 PF12833 Helix-turn-helix domain BXU06_11860 PF02277 Phosphoribosyltransferase BXU06_11865 PF00300 Histidine phosphatase superfamily (branch 1) BXU06_11870 PF02654 Cobalamin-5-phosphate synthase BXU06_11890 PF00850 Histone deacetylase domain BXU06_11895 PF04545 Sigma-70, region 4 BXU06_11895 PF04539 Sigma-70 region 3 BXU06_11895 PF00140 Sigma-70 factor, region 1.2 BXU06_11895 PF04542 Sigma-70 region 2 BXU06_11900 PF01476 LysM domain BXU06_11900 PF01551 Peptidase family M23 BXU06_11910 PF01975 Survival protein SurE BXU06_11915 PF02445 Quinolinate synthetase A protein BXU06_11920 PF00583 Acetyltransferase (GNAT) family BXU06_11920 PF13380 CoA binding domain BXU06_11920 PF13607 Succinyl-CoA ligase like flavodoxin domain BXU06_11925 PF00886 Ribosomal protein S16 BXU06_11930 PF01782 RimM N-terminal domain BXU06_11930 PF05239 PRC-barrel domain BXU06_11935 PF01746 tRNA (Guanine-1)-methyltransferase BXU06_11940 PF01245 Ribosomal protein L19 BXU06_11945 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BXU06_11945 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BXU06_11950 PF10431 C-terminal, D2-small domain, of ClpB protein BXU06_11950 PF02861 Clp amino terminal domain, pathogenicity island component BXU06_11950 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_11950 PF07724 AAA domain (Cdc48 subfamily) BXU06_11950 PF17871 AAA lid domain BXU06_11955 PF02617 ATP-dependent Clp protease adaptor protein ClpS BXU06_11965 PF00313 'Cold-shock' DNA-binding domain BXU06_11970 PF00313 'Cold-shock' DNA-binding domain BXU06_11975 PF00180 Isocitrate/isopropylmalate dehydrogenase BXU06_11980 PF00849 RNA pseudouridylate synthase BXU06_11985 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BXU06_11990 PF04073 Aminoacyl-tRNA editing domain BXU06_11995 PF00639 PPIC-type PPIASE domain BXU06_12000 PF04319 NifZ domain BXU06_12005 PF03206 Nitrogen fixation protein NifW BXU06_12015 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_12020 PF00682 HMGL-like BXU06_12025 PF02082 Transcriptional regulator BXU06_12030 PF00175 Oxidoreductase NAD-binding domain BXU06_12030 PF00970 Oxidoreductase FAD-binding domain BXU06_12030 PF00042 Globin BXU06_12035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_12050 PF00909 Ammonium Transporter Family BXU06_12055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_12055 PF13426 PAS domain BXU06_12055 PF08447 PAS fold BXU06_12070 PF02913 FAD linked oxidases, C-terminal domain BXU06_12070 PF01565 FAD binding domain BXU06_12080 PF00875 DNA photolyase BXU06_12080 PF03441 FAD binding domain of DNA photolyase BXU06_12085 PF02515 CoA-transferase family III BXU06_12100 PF02881 SRP54-type protein, helical bundle domain BXU06_12100 PF00448 SRP54-type protein, GTPase domain BXU06_12100 PF02978 Signal peptide binding domain BXU06_12110 PF00206 Lyase BXU06_12110 PF08328 Adenylosuccinate lyase C-terminal BXU06_12115 PF00953 Glycosyl transferase family 4 BXU06_12120 PF00534 Glycosyl transferases group 1 BXU06_12120 PF13439 Glycosyltransferase Family 4 BXU06_12135 PF04794 YdjC-like protein BXU06_12145 PF13537 Glutamine amidotransferase domain BXU06_12145 PF00733 Asparagine synthase BXU06_12170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BXU06_12175 PF00483 Nucleotidyl transferase BXU06_12180 PF16363 GDP-mannose 4,6 dehydratase BXU06_12190 PF02563 Polysaccharide biosynthesis/export protein BXU06_12190 PF10531 SLBB domain BXU06_12195 PF03350 Uncharacterized protein family, UPF0114 BXU06_12200 PF02219 Methylenetetrahydrofolate reductase BXU06_12205 PF05221 S-adenosyl-L-homocysteine hydrolase BXU06_12205 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BXU06_12210 PF02772 S-adenosylmethionine synthetase, central domain BXU06_12210 PF02773 S-adenosylmethionine synthetase, C-terminal domain BXU06_12210 PF00438 S-adenosylmethionine synthetase, N-terminal domain BXU06_12220 PF03279 Bacterial lipid A biosynthesis acyltransferase BXU06_12230 PF00361 Proton-conducting membrane transporter BXU06_12235 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BXU06_12235 PF00361 Proton-conducting membrane transporter BXU06_12240 PF00361 Proton-conducting membrane transporter BXU06_12240 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BXU06_12245 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BXU06_12250 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BXU06_12255 PF12838 4Fe-4S dicluster domain BXU06_12260 PF00146 NADH dehydrogenase BXU06_12265 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BXU06_12265 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BXU06_12265 PF00384 Molybdopterin oxidoreductase BXU06_12270 PF10531 SLBB domain BXU06_12270 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BXU06_12270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BXU06_12280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BXU06_12285 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BXU06_12290 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BXU06_12295 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BXU06_12305 PF03840 Preprotein translocase SecG subunit BXU06_12310 PF00121 Triosephosphate isomerase BXU06_12315 PF12849 PBP superfamily domain BXU06_12320 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_12325 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_12330 PF00005 ABC transporter BXU06_12335 PF00149 Calcineurin-like phosphoesterase BXU06_12340 PF02463 RecF/RecN/SMC N terminal domain BXU06_12340 PF06470 SMC proteins Flexible Hinge Domain BXU06_12350 PF01553 Acyltransferase BXU06_12355 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BXU06_12355 PF06827 Zinc finger found in FPG and IleRS BXU06_12355 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BXU06_12365 PF03550 Outer membrane lipoprotein LolB BXU06_12370 PF08544 GHMP kinases C terminal BXU06_12370 PF00288 GHMP kinases N terminal domain BXU06_12380 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BXU06_12380 PF14572 Phosphoribosyl synthetase-associated domain BXU06_12385 PF01386 Ribosomal L25p family BXU06_12385 PF14693 Ribosomal protein TL5, C-terminal domain BXU06_12390 PF01195 Peptidyl-tRNA hydrolase BXU06_12395 PF06071 Protein of unknown function (DUF933) BXU06_12395 PF01926 50S ribosome-binding GTPase BXU06_12410 PF18766 SWI2/SNF2 ATPase BXU06_12410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BXU06_12410 PF11867 Domain of unknown function (DUF3387) BXU06_12425 PF01420 Type I restriction modification DNA specificity domain BXU06_12430 PF02384 N-6 DNA Methylase BXU06_12440 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_12450 PF02653 Branched-chain amino acid transport system / permease component BXU06_12460 PF00005 ABC transporter BXU06_12460 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_12465 PF00005 ABC transporter BXU06_12470 PF03109 ABC1 family BXU06_12480 PF01209 ubiE/COQ5 methyltransferase family BXU06_12490 PF02547 Queuosine biosynthesis protein BXU06_12495 PF01220 Dehydroquinase class II BXU06_12500 PF00364 Biotin-requiring enzyme BXU06_12505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BXU06_12505 PF02785 Biotin carboxylase C-terminal domain BXU06_12505 PF00289 Biotin carboxylase, N-terminal domain BXU06_12520 PF00180 Isocitrate/isopropylmalate dehydrogenase BXU06_12525 PF13439 Glycosyltransferase Family 4 BXU06_12525 PF00534 Glycosyl transferases group 1 BXU06_12545 PF00145 C-5 cytosine-specific DNA methylase BXU06_12575 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BXU06_12575 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BXU06_12580 PF02082 Transcriptional regulator BXU06_12585 PF00266 Aminotransferase class-V BXU06_12590 PF01592 NifU-like N terminal domain BXU06_12595 PF01521 Iron-sulphur cluster biosynthesis BXU06_12600 PF07743 HSCB C-terminal oligomerisation domain BXU06_12605 PF00012 Hsp70 protein BXU06_12610 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_12615 PF04384 Iron-sulphur cluster assembly BXU06_12620 PF07804 HipA-like C-terminal domain BXU06_12620 PF13657 HipA N-terminal domain BXU06_12635 PF02652 L-lactate permease BXU06_12645 PF11870 Domain of unknown function (DUF3390) BXU06_12645 PF13183 4Fe-4S dicluster domain BXU06_12645 PF02589 LUD domain BXU06_12650 PF02589 LUD domain BXU06_12655 PF02754 Cysteine-rich domain BXU06_12660 PF07729 FCD domain BXU06_12660 PF00392 Bacterial regulatory proteins, gntR family BXU06_12665 PF03594 Benzoate membrane transport protein BXU06_12670 PF00155 Aminotransferase class I and II BXU06_12670 PF00392 Bacterial regulatory proteins, gntR family BXU06_12675 PF01078 Magnesium chelatase, subunit ChlI BXU06_12675 PF13335 Magnesium chelatase, subunit ChlI C-terminal BXU06_12680 PF04380 Membrane fusogenic activity BXU06_12685 PF00543 Nitrogen regulatory protein P-II BXU06_12690 PF00909 Ammonium Transporter Family BXU06_12700 PF01168 Alanine racemase, N-terminal domain BXU06_12700 PF00842 Alanine racemase, C-terminal domain BXU06_12705 PF09335 SNARE associated Golgi protein BXU06_12710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BXU06_12715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BXU06_12715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BXU06_12720 PF01435 Peptidase family M48 BXU06_12725 PF13411 MerR HTH family regulatory protein BXU06_12725 PF02607 B12 binding domain BXU06_12730 PF08019 Phosphoethanolamine transferase EptA/EptB BXU06_12730 PF00884 Sulfatase BXU06_12735 PF01385 Probable transposase BXU06_12735 PF07282 Putative transposase DNA-binding domain BXU06_12735 PF12323 Helix-turn-helix domain BXU06_12745 PF07848 PaaX-like protein BXU06_12745 PF08223 PaaX-like protein C-terminal domain BXU06_12750 PF06099 Phenol hydroxylase subunit BXU06_12755 PF02332 Methane/Phenol/Toluene Hydroxylase BXU06_12760 PF02406 MmoB/DmpM family BXU06_12765 PF04945 YHS domain BXU06_12765 PF02332 Methane/Phenol/Toluene Hydroxylase BXU06_12770 PF04663 Phenol hydroxylase conserved region BXU06_12775 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_12775 PF00970 Oxidoreductase FAD-binding domain BXU06_12775 PF00175 Oxidoreductase NAD-binding domain BXU06_12780 PF04221 RelB antitoxin BXU06_12785 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ BXU06_12795 PF01205 Uncharacterized protein family UPF0029 BXU06_12795 PF09186 Domain of unknown function (DUF1949) BXU06_12800 PF04115 Ureidoglycolate lyase BXU06_12805 PF03561 Allantoicase repeat BXU06_12815 PF00156 Phosphoribosyl transferase domain BXU06_12825 PF00576 HIUase/Transthyretin family BXU06_12830 PF09349 OHCU decarboxylase BXU06_12830 PF01014 Uricase BXU06_12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_12855 PF03466 LysR substrate binding domain BXU06_12860 PF03707 Bacterial signalling protein N terminal repeat BXU06_12860 PF00563 EAL domain BXU06_12860 PF00990 Diguanylate cyclase, GGDEF domain BXU06_12870 PF01794 Ferric reductase like transmembrane component BXU06_12875 PF00174 Oxidoreductase molybdopterin binding domain BXU06_12880 PF02525 Flavodoxin-like fold BXU06_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_12885 PF03466 LysR substrate binding domain BXU06_12895 PF01609 Transposase DDE domain BXU06_12895 PF13808 DDE_Tnp_1-associated BXU06_12900 PF00664 ABC transporter transmembrane region BXU06_12900 PF00005 ABC transporter BXU06_12915 PF01464 Transglycosylase SLT domain BXU06_12925 PF00829 Ribosomal prokaryotic L21 protein BXU06_12930 PF01016 Ribosomal L27 protein BXU06_12935 PF01018 GTP1/OBG BXU06_12935 PF01926 50S ribosome-binding GTPase BXU06_12945 PF00005 ABC transporter BXU06_12945 PF08402 TOBE domain BXU06_12950 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_12955 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_12975 PF03631 Virulence factor BrkB BXU06_12980 PF03358 NADPH-dependent FMN reductase BXU06_12990 PF00486 Transcriptional regulatory protein, C terminal BXU06_12990 PF00072 Response regulator receiver domain BXU06_12995 PF00672 HAMP domain BXU06_12995 PF00512 His Kinase A (phospho-acceptor) domain BXU06_12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_13020 PF02579 Dinitrogenase iron-molybdenum cofactor BXU06_13020 PF04055 Radical SAM superfamily BXU06_13025 PF12838 4Fe-4S dicluster domain BXU06_13030 PF03960 ArsC family BXU06_13035 PF00753 Metallo-beta-lactamase superfamily BXU06_13035 PF00258 Flavodoxin BXU06_13040 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_13045 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_13050 PF04891 NifQ BXU06_13055 PF03747 ADP-ribosylglycohydrolase BXU06_13060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13060 PF08447 PAS fold BXU06_13065 PF00512 His Kinase A (phospho-acceptor) domain BXU06_13065 PF00072 Response regulator receiver domain BXU06_13065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_13065 PF00989 PAS fold BXU06_13065 PF01627 Hpt domain BXU06_13065 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_13070 PF00072 Response regulator receiver domain BXU06_13075 PF01590 GAF domain BXU06_13075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_13075 PF00360 Phytochrome region BXU06_13075 PF00512 His Kinase A (phospho-acceptor) domain BXU06_13075 PF08446 PAS fold BXU06_13080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_13080 PF00512 His Kinase A (phospho-acceptor) domain BXU06_13080 PF07689 KaiB domain BXU06_13085 PF00072 Response regulator receiver domain BXU06_13090 PF00563 EAL domain BXU06_13090 PF00990 Diguanylate cyclase, GGDEF domain BXU06_13090 PF03707 Bacterial signalling protein N terminal repeat BXU06_13135 PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) BXU06_13140 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family BXU06_13145 PF00148 Nitrogenase component 1 type Oxidoreductase BXU06_13150 PF11844 Domain of unknown function (DUF3364) BXU06_13150 PF00148 Nitrogenase component 1 type Oxidoreductase BXU06_13160 PF00037 4Fe-4S binding domain BXU06_13165 PF02579 Dinitrogenase iron-molybdenum cofactor BXU06_13165 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal BXU06_13180 PF00148 Nitrogenase component 1 type Oxidoreductase BXU06_13195 PF00258 Flavodoxin BXU06_13200 PF00148 Nitrogenase component 1 type Oxidoreductase BXU06_13205 PF02579 Dinitrogenase iron-molybdenum cofactor BXU06_13215 PF03270 Protein of unknown function, DUF269 BXU06_13240 PF01521 Iron-sulphur cluster biosynthesis BXU06_13245 PF04324 BFD-like [2Fe-2S] binding domain BXU06_13245 PF01592 NifU-like N terminal domain BXU06_13245 PF01106 NifU-like domain BXU06_13250 PF00266 Aminotransferase class-V BXU06_13255 PF00258 Flavodoxin BXU06_13265 PF17886 HSP20-like domain found in ArsA BXU06_13265 PF02374 Anion-transporting ATPase BXU06_13275 PF01323 DSBA-like thioredoxin domain BXU06_13290 PF00902 Sec-independent protein translocase protein (TatC) BXU06_13295 PF02416 mttA/Hcf106 family BXU06_13300 PF02416 mttA/Hcf106 family BXU06_13310 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BXU06_13315 PF01502 Phosphoribosyl-AMP cyclohydrolase BXU06_13320 PF00977 Histidine biosynthesis protein BXU06_13325 PF00977 Histidine biosynthesis protein BXU06_13330 PF00117 Glutamine amidotransferase class-I BXU06_13335 PF00475 Imidazoleglycerol-phosphate dehydratase BXU06_13340 PF00155 Aminotransferase class I and II BXU06_13360 PF00534 Glycosyl transferases group 1 BXU06_13365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BXU06_13370 PF01522 Polysaccharide deacetylase BXU06_13375 PF13439 Glycosyltransferase Family 4 BXU06_13375 PF00534 Glycosyl transferases group 1 BXU06_13380 PF00664 ABC transporter transmembrane region BXU06_13380 PF00005 ABC transporter BXU06_13385 PF00892 EamA-like transporter family BXU06_13395 PF00529 HlyD membrane-fusion protein of T1SS BXU06_13395 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU06_13400 PF00873 AcrB/AcrD/AcrF family BXU06_13410 PF10417 C-terminal domain of 1-Cys peroxiredoxin BXU06_13410 PF00578 AhpC/TSA family BXU06_13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_13415 PF13192 Thioredoxin domain BXU06_13435 PF00691 OmpA family BXU06_13440 PF04052 TolB amino-terminal domain BXU06_13440 PF07676 WD40-like Beta Propeller Repeat BXU06_13450 PF02472 Biopolymer transport protein ExbD/TolR BXU06_13465 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BXU06_13465 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BXU06_13475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_13475 PF03459 TOBE domain BXU06_13480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_13480 PF03459 TOBE domain BXU06_13490 PF14698 Argininosuccinate lyase C-terminal BXU06_13490 PF00206 Lyase BXU06_13505 PF01206 Sulfurtransferase TusA BXU06_13510 PF01979 Amidohydrolase family BXU06_13540 PF03315 Serine dehydratase beta chain BXU06_13540 PF03313 Serine dehydratase alpha chain BXU06_13545 PF00990 Diguanylate cyclase, GGDEF domain BXU06_13545 PF00563 EAL domain BXU06_13545 PF03707 Bacterial signalling protein N terminal repeat BXU06_13555 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU06_13560 PF00171 Aldehyde dehydrogenase family BXU06_13565 PF00202 Aminotransferase class-III BXU06_13570 PF13416 Bacterial extracellular solute-binding protein BXU06_13575 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_13575 PF01799 [2Fe-2S] binding domain BXU06_13580 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BXU06_13580 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BXU06_13605 PF01979 Amidohydrolase family BXU06_13625 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_13630 PF00005 ABC transporter BXU06_13645 PF07690 Major Facilitator Superfamily BXU06_13650 PF03466 LysR substrate binding domain BXU06_13650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_13660 PF01218 Coproporphyrinogen III oxidase BXU06_13665 PF00563 EAL domain BXU06_13665 PF03707 Bacterial signalling protein N terminal repeat BXU06_13665 PF00990 Diguanylate cyclase, GGDEF domain BXU06_13680 PF11798 IMS family HHH motif BXU06_13680 PF00817 impB/mucB/samB family BXU06_13685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13685 PF13426 PAS domain BXU06_13685 PF08447 PAS fold BXU06_13690 PF17200 Single Cache domain 2 BXU06_13690 PF00672 HAMP domain BXU06_13690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13695 PF00582 Universal stress protein family BXU06_13700 PF00849 RNA pseudouridylate synthase BXU06_13700 PF01479 S4 domain BXU06_13705 PF02743 Cache domain BXU06_13705 PF00672 HAMP domain BXU06_13705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13715 PF13426 PAS domain BXU06_13715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13715 PF08447 PAS fold BXU06_13720 PF01479 S4 domain BXU06_13720 PF01728 FtsJ-like methyltransferase BXU06_13725 PF08534 Redoxin BXU06_13730 PF00294 pfkB family carbohydrate kinase BXU06_13740 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BXU06_13740 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BXU06_13745 PF02424 ApbE family BXU06_13750 PF01219 Prokaryotic diacylglycerol kinase BXU06_13765 PF00710 Asparaginase, N-terminal BXU06_13765 PF17763 Glutaminase/Asparaginase C-terminal domain BXU06_13770 PF00326 Prolyl oligopeptidase family BXU06_13770 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BXU06_13775 PF02595 Glycerate kinase family BXU06_13780 PF00158 Sigma-54 interaction domain BXU06_13780 PF00072 Response regulator receiver domain BXU06_13780 PF02954 Bacterial regulatory protein, Fis family BXU06_13785 PF02743 Cache domain BXU06_13785 PF00512 His Kinase A (phospho-acceptor) domain BXU06_13785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_13790 PF00005 ABC transporter BXU06_13795 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_13800 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_13805 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_13825 PF00486 Transcriptional regulatory protein, C terminal BXU06_13825 PF00072 Response regulator receiver domain BXU06_13830 PF00899 ThiF family BXU06_13835 PF00156 Phosphoribosyl transferase domain BXU06_13840 PF03372 Endonuclease/Exonuclease/phosphatase family BXU06_13845 PF00672 HAMP domain BXU06_13845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13850 PF02545 Maf-like protein BXU06_13855 PF10150 Ribonuclease E/G family BXU06_13855 PF00575 S1 RNA binding domain BXU06_13860 PF06426 Serine acetyltransferase, N-terminal BXU06_13860 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_13865 PF01863 Protein of unknown function DUF45 BXU06_13885 PF03150 Di-haem cytochrome c peroxidase BXU06_13885 PF00034 Cytochrome c BXU06_13890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13890 PF00672 HAMP domain BXU06_13890 PF02203 Tar ligand binding domain homologue BXU06_13900 PF00563 EAL domain BXU06_13900 PF00990 Diguanylate cyclase, GGDEF domain BXU06_13900 PF03707 Bacterial signalling protein N terminal repeat BXU06_13905 PF01098 Cell cycle protein BXU06_13910 PF03717 Penicillin-binding Protein dimerisation domain BXU06_13910 PF00905 Penicillin binding protein transpeptidase domain BXU06_13920 PF04085 rod shape-determining protein MreC BXU06_13930 PF02686 Glu-tRNAGln amidotransferase C subunit BXU06_13935 PF01425 Amidase BXU06_13940 PF02637 GatB domain BXU06_13940 PF02934 GatB/GatE catalytic domain BXU06_13970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_13970 PF00672 HAMP domain BXU06_13970 PF02743 Cache domain BXU06_13975 PF02574 Homocysteine S-methyltransferase BXU06_13980 PF02381 MraZ protein, putative antitoxin-like BXU06_13985 PF01795 MraW methylase family BXU06_13990 PF04999 Cell division protein FtsL BXU06_13995 PF03717 Penicillin-binding Protein dimerisation domain BXU06_13995 PF00905 Penicillin binding protein transpeptidase domain BXU06_14000 PF08245 Mur ligase middle domain BXU06_14000 PF02875 Mur ligase family, glutamate ligase domain BXU06_14000 PF01225 Mur ligase family, catalytic domain BXU06_14005 PF02875 Mur ligase family, glutamate ligase domain BXU06_14005 PF01225 Mur ligase family, catalytic domain BXU06_14005 PF08245 Mur ligase middle domain BXU06_14010 PF00953 Glycosyl transferase family 4 BXU06_14015 PF02875 Mur ligase family, glutamate ligase domain BXU06_14015 PF08245 Mur ligase middle domain BXU06_14020 PF01098 Cell cycle protein BXU06_14025 PF03033 Glycosyltransferase family 28 N-terminal domain BXU06_14025 PF04101 Glycosyltransferase family 28 C-terminal domain BXU06_14030 PF01225 Mur ligase family, catalytic domain BXU06_14030 PF02875 Mur ligase family, glutamate ligase domain BXU06_14030 PF08245 Mur ligase middle domain BXU06_14035 PF01820 D-ala D-ala ligase N-terminus BXU06_14035 PF07478 D-ala D-ala ligase C-terminus BXU06_14040 PF03799 Cell division protein FtsQ BXU06_14040 PF08478 POTRA domain, FtsQ-type BXU06_14045 PF02491 SHS2 domain inserted in FTSA BXU06_14050 PF00091 Tubulin/FtsZ family, GTPase domain BXU06_14050 PF12327 FtsZ family, C-terminal domain BXU06_14055 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BXU06_14060 PF01967 MoaC family BXU06_14065 PF12323 Helix-turn-helix domain BXU06_14065 PF01385 Probable transposase BXU06_14065 PF07282 Putative transposase DNA-binding domain BXU06_14070 PF05598 Transposase domain (DUF772) BXU06_14070 PF01609 Transposase DDE domain BXU06_14075 PF00403 Heavy-metal-associated domain BXU06_14085 PF04055 Radical SAM superfamily BXU06_14085 PF13186 Iron-sulfur cluster-binding domain BXU06_14135 PF13808 DDE_Tnp_1-associated BXU06_14135 PF01609 Transposase DDE domain BXU06_14165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_14165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BXU06_14170 PF00196 Bacterial regulatory proteins, luxR family BXU06_14170 PF00072 Response regulator receiver domain BXU06_14175 PF01385 Probable transposase BXU06_14175 PF07282 Putative transposase DNA-binding domain BXU06_14175 PF12323 Helix-turn-helix domain BXU06_14180 PF00072 Response regulator receiver domain BXU06_14180 PF00512 His Kinase A (phospho-acceptor) domain BXU06_14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_14180 PF01627 Hpt domain BXU06_14180 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_14190 PF00310 Glutamine amidotransferases class-II BXU06_14190 PF04898 Glutamate synthase central domain BXU06_14190 PF01493 GXGXG motif BXU06_14190 PF01645 Conserved region in glutamate synthase BXU06_14195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BXU06_14195 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_14200 PF07683 Cobalamin synthesis protein cobW C-terminal domain BXU06_14200 PF02492 CobW/HypB/UreG, nucleotide-binding domain BXU06_14205 PF02525 Flavodoxin-like fold BXU06_14210 PF00925 GTP cyclohydrolase II BXU06_14215 PF13361 UvrD-like helicase C-terminal domain BXU06_14215 PF00580 UvrD/REP helicase N-terminal domain BXU06_14235 PF00196 Bacterial regulatory proteins, luxR family BXU06_14235 PF00563 EAL domain BXU06_14250 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_14255 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_14260 PF12857 TOBE-like domain BXU06_14260 PF17850 CysA C-terminal regulatory domain BXU06_14260 PF00005 ABC transporter BXU06_14270 PF02608 ABC transporter substrate-binding protein PnrA-like BXU06_14275 PF00962 Adenosine/AMP deaminase BXU06_14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_14280 PF03466 LysR substrate binding domain BXU06_14295 PF03480 Bacterial extracellular solute-binding protein, family 7 BXU06_14305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BXU06_14310 PF12323 Helix-turn-helix domain BXU06_14310 PF01385 Probable transposase BXU06_14310 PF07282 Putative transposase DNA-binding domain BXU06_14315 PF00701 Dihydrodipicolinate synthetase family BXU06_14320 PF00005 ABC transporter BXU06_14325 PF01032 FecCD transport family BXU06_14330 PF01497 Periplasmic binding protein BXU06_14335 PF05171 Haemin-degrading HemS.ChuX domain BXU06_14340 PF07715 TonB-dependent Receptor Plug Domain BXU06_14340 PF00593 TonB dependent receptor BXU06_14345 PF10636 Hemin uptake protein hemP BXU06_14380 PF13808 DDE_Tnp_1-associated BXU06_14380 PF01609 Transposase DDE domain BXU06_14390 PF01609 Transposase DDE domain BXU06_14390 PF13808 DDE_Tnp_1-associated BXU06_14415 PF08443 RimK-like ATP-grasp domain BXU06_14415 PF08245 Mur ligase middle domain BXU06_14415 PF02875 Mur ligase family, glutamate ligase domain BXU06_14440 PF00072 Response regulator receiver domain BXU06_14440 PF01339 CheB methylesterase BXU06_14445 PF03975 CheD chemotactic sensory transduction BXU06_14450 PF01739 CheR methyltransferase, SAM binding domain BXU06_14450 PF03705 CheR methyltransferase, all-alpha domain BXU06_14455 PF01584 CheW-like domain BXU06_14465 PF01627 Hpt domain BXU06_14465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_14465 PF02895 Signal transducing histidine kinase, homodimeric domain BXU06_14465 PF09078 CheY binding BXU06_14465 PF01584 CheW-like domain BXU06_14475 PF08671 Anti-repressor SinI BXU06_14475 PF01381 Helix-turn-helix BXU06_14480 PF00672 HAMP domain BXU06_14480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_14490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_14490 PF00512 His Kinase A (phospho-acceptor) domain BXU06_14490 PF08521 Two-component sensor kinase N-terminal BXU06_14495 PF01385 Probable transposase BXU06_14495 PF07282 Putative transposase DNA-binding domain BXU06_14495 PF12323 Helix-turn-helix domain BXU06_14515 PF12323 Helix-turn-helix domain BXU06_14515 PF01385 Probable transposase BXU06_14515 PF07282 Putative transposase DNA-binding domain BXU06_14520 PF00155 Aminotransferase class I and II BXU06_14525 PF00815 Histidinol dehydrogenase BXU06_14530 PF01810 LysE type translocator BXU06_14535 PF01634 ATP phosphoribosyltransferase BXU06_14565 PF05958 tRNA (Uracil-5-)-methyltransferase BXU06_14565 PF01938 TRAM domain BXU06_14580 PF17151 Periplasmic sensor domain BXU06_14580 PF00990 Diguanylate cyclase, GGDEF domain BXU06_14585 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BXU06_14585 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BXU06_14590 PF10369 Small subunit of acetolactate synthase BXU06_14595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BXU06_14595 PF00205 Thiamine pyrophosphate enzyme, central domain BXU06_14595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BXU06_14620 PF02630 SCO1/SenC BXU06_14625 PF07317 Flagellar regulator YcgR BXU06_14625 PF07238 PilZ domain BXU06_14630 PF02666 Phosphatidylserine decarboxylase BXU06_14635 PF01066 CDP-alcohol phosphatidyltransferase BXU06_14640 PF08502 LeuA allosteric (dimerisation) domain BXU06_14640 PF00682 HMGL-like BXU06_14650 PF08240 Alcohol dehydrogenase GroES-like domain BXU06_14650 PF00107 Zinc-binding dehydrogenase BXU06_14655 PF00440 Bacterial regulatory proteins, tetR family BXU06_14655 PF16925 Tetracyclin repressor-like, C-terminal domain BXU06_14690 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BXU06_14690 PF02843 Phosphoribosylglycinamide synthetase, C domain BXU06_14690 PF02844 Phosphoribosylglycinamide synthetase, N domain BXU06_14695 PF02142 MGS-like domain BXU06_14695 PF01808 AICARFT/IMPCHase bienzyme BXU06_14700 PF02954 Bacterial regulatory protein, Fis family BXU06_14705 PF01207 Dihydrouridine synthase (Dus) BXU06_14730 PF01380 SIS domain BXU06_14735 PF12804 MobA-like NTP transferase domain BXU06_14735 PF14602 Hexapeptide repeat of succinyl-transferase BXU06_14735 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_14740 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BXU06_14740 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BXU06_14745 PF02874 ATP synthase alpha/beta family, beta-barrel domain BXU06_14745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU06_14750 PF00231 ATP synthase BXU06_14755 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BXU06_14755 PF00306 ATP synthase alpha/beta chain, C terminal domain BXU06_14755 PF02874 ATP synthase alpha/beta family, beta-barrel domain BXU06_14760 PF00213 ATP synthase delta (OSCP) subunit BXU06_14765 PF00430 ATP synthase B/B' CF(0) BXU06_14770 PF00137 ATP synthase subunit C BXU06_14775 PF00119 ATP synthase A chain BXU06_14785 PF17762 HTH domain found in ParB protein BXU06_14785 PF02195 ParB-like nuclease domain BXU06_14790 PF13614 AAA domain BXU06_14795 PF02527 rRNA small subunit methyltransferase G BXU06_14800 PF01134 Glucose inhibited division protein A BXU06_14800 PF13932 GidA associated domain BXU06_14810 PF00072 Response regulator receiver domain BXU06_14810 PF00158 Sigma-54 interaction domain BXU06_14810 PF02954 Bacterial regulatory protein, Fis family BXU06_14820 PF01654 Cytochrome bd terminal oxidase subunit I BXU06_14825 PF02322 Cytochrome bd terminal oxidase subunit II BXU06_14845 PF01980 tRNA-methyltransferase O BXU06_14845 PF18389 TrmO C-terminal domain BXU06_14855 PF10442 FIST C domain BXU06_14855 PF00990 Diguanylate cyclase, GGDEF domain BXU06_14855 PF00563 EAL domain BXU06_14855 PF08495 FIST N domain BXU06_14860 PF04972 BON domain BXU06_14865 PF13580 SIS domain BXU06_14870 PF02021 Uncharacterised protein family UPF0102 BXU06_14875 PF04348 LppC putative lipoprotein BXU06_14880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU06_14900 PF03309 Type III pantothenate kinase BXU06_14905 PF03099 Biotin/lipoate A/B protein ligase family BXU06_14905 PF08279 HTH domain BXU06_14905 PF02237 Biotin protein ligase C terminal domain BXU06_14910 PF01467 Cytidylyltransferase-like BXU06_14945 PF10431 C-terminal, D2-small domain, of ClpB protein BXU06_14945 PF07724 AAA domain (Cdc48 subfamily) BXU06_14945 PF00004 ATPase family associated with various cellular activities (AAA) BXU06_14950 PF00227 Proteasome subunit BXU06_14970 PF02627 Carboxymuconolactone decarboxylase family BXU06_14975 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_14975 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BXU06_14980 PF01132 Elongation factor P (EF-P) OB domain BXU06_14980 PF08207 Elongation factor P (EF-P) KOW-like domain BXU06_14980 PF09285 Elongation factor P, C-terminal BXU06_14990 PF01037 Lrp/AsnC ligand binding domain BXU06_14995 PF01266 FAD dependent oxidoreductase BXU06_15000 PF08448 PAS fold BXU06_15000 PF00563 EAL domain BXU06_15000 PF00990 Diguanylate cyclase, GGDEF domain BXU06_15035 PF00196 Bacterial regulatory proteins, luxR family BXU06_15075 PF12392 Collagenase BXU06_15075 PF01136 Peptidase family U32 BXU06_15080 PF03466 LysR substrate binding domain BXU06_15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_15085 PF07690 Major Facilitator Superfamily BXU06_15120 PF02574 Homocysteine S-methyltransferase BXU06_15120 PF02310 B12 binding domain BXU06_15120 PF02965 Vitamin B12 dependent methionine synthase, activation domain BXU06_15120 PF02607 B12 binding domain BXU06_15120 PF00809 Pterin binding enzyme BXU06_15125 PF00563 EAL domain BXU06_15125 PF00990 Diguanylate cyclase, GGDEF domain BXU06_15125 PF03707 Bacterial signalling protein N terminal repeat BXU06_15130 PF13411 MerR HTH family regulatory protein BXU06_15135 PF00005 ABC transporter BXU06_15135 PF00664 ABC transporter transmembrane region BXU06_15165 PF01966 HD domain BXU06_15175 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BXU06_15175 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BXU06_15180 PF01491 Frataxin-like domain BXU06_15185 PF09335 SNARE associated Golgi protein BXU06_15190 PF00398 Ribosomal RNA adenine dimethylase BXU06_15195 PF00005 ABC transporter BXU06_15200 PF00497 Bacterial extracellular solute-binding proteins, family 3 BXU06_15205 PF00027 Cyclic nucleotide-binding domain BXU06_15205 PF13545 Crp-like helix-turn-helix domain BXU06_15215 PF00578 AhpC/TSA family BXU06_15235 PF00210 Ferritin-like domain BXU06_15240 PF02594 Uncharacterised ACR, YggU family COG1872 BXU06_15250 PF08534 Redoxin BXU06_15255 PF04186 FxsA cytoplasmic membrane protein BXU06_15260 PF03091 CutA1 divalent ion tolerance protein BXU06_15265 PF00085 Thioredoxin BXU06_15265 PF02683 Cytochrome C biogenesis protein transmembrane region BXU06_15265 PF11412 Disulphide bond corrector protein DsbC BXU06_15270 PF00892 EamA-like transporter family BXU06_15295 PF04452 RNA methyltransferase BXU06_15300 PF00459 Inositol monophosphatase family BXU06_15310 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BXU06_15310 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BXU06_15315 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BXU06_15315 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BXU06_15320 PF00534 Glycosyl transferases group 1 BXU06_15320 PF13439 Glycosyltransferase Family 4 BXU06_15325 PF00672 HAMP domain BXU06_15325 PF12729 Four helix bundle sensory module for signal transduction BXU06_15325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_15330 PF00400 WD domain, G-beta repeat BXU06_15330 PF12894 Anaphase-promoting complex subunit 4 WD40 domain BXU06_15345 PF02146 Sir2 family BXU06_15350 PF03692 Putative zinc- or iron-chelating domain BXU06_15355 PF00120 Glutamine synthetase, catalytic domain BXU06_15360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BXU06_15360 PF10414 Sirohaem synthase dimerisation region BXU06_15375 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BXU06_15385 PF00348 Polyprenyl synthetase BXU06_15405 PF13439 Glycosyltransferase Family 4 BXU06_15405 PF00534 Glycosyl transferases group 1 BXU06_15410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BXU06_15415 PF02896 PEP-utilising enzyme, TIM barrel domain BXU06_15415 PF00391 PEP-utilising enzyme, mobile domain BXU06_15415 PF05524 PEP-utilising enzyme, N-terminal BXU06_15420 PF00381 PTS HPr component phosphorylation site BXU06_15425 PF03830 PTS system sorbose subfamily IIB component BXU06_15425 PF03610 PTS system fructose IIA component BXU06_15455 PF16527 Two-component sensor protein CpxA, periplasmic domain BXU06_15455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_15455 PF00512 His Kinase A (phospho-acceptor) domain BXU06_15455 PF00672 HAMP domain BXU06_15460 PF00072 Response regulator receiver domain BXU06_15460 PF00486 Transcriptional regulatory protein, C terminal BXU06_15470 PF13667 ThiC-associated domain BXU06_15470 PF01964 Radical SAM ThiC family BXU06_15485 PF03167 Uracil DNA glycosylase superfamily BXU06_15490 PF01370 NAD dependent epimerase/dehydratase family BXU06_15495 PF00535 Glycosyl transferase family 2 BXU06_15500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BXU06_15505 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BXU06_15525 PF02581 Thiamine monophosphate synthase BXU06_15530 PF08543 Phosphomethylpyrimidine kinase BXU06_15535 PF00301 Rubredoxin BXU06_15550 PF00202 Aminotransferase class-III BXU06_15575 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) BXU06_15580 PF03707 Bacterial signalling protein N terminal repeat BXU06_15580 PF00990 Diguanylate cyclase, GGDEF domain BXU06_15580 PF00563 EAL domain BXU06_15585 PF00455 DeoR C terminal sensor domain BXU06_15585 PF08220 DeoR-like helix-turn-helix domain BXU06_15590 PF01177 Asp/Glu/Hydantoin racemase BXU06_15595 PF00521 DNA gyrase/topoisomerase IV, subunit A BXU06_15600 PF13673 Acetyltransferase (GNAT) domain BXU06_15605 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_15610 PF00158 Sigma-54 interaction domain BXU06_15610 PF02954 Bacterial regulatory protein, Fis family BXU06_15610 PF00072 Response regulator receiver domain BXU06_15625 PF00512 His Kinase A (phospho-acceptor) domain BXU06_15625 PF02743 Cache domain BXU06_15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_15630 PF00005 ABC transporter BXU06_15635 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_15640 PF09084 NMT1/THI5 like BXU06_15645 PF01757 Acyltransferase family BXU06_15650 PF07516 SecA Wing and Scaffold domain BXU06_15650 PF07517 SecA DEAD-like domain BXU06_15650 PF02810 SEC-C motif BXU06_15650 PF01043 SecA preprotein cross-linking domain BXU06_15660 PF00672 HAMP domain BXU06_15660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_15660 PF17200 Single Cache domain 2 BXU06_15665 PF00440 Bacterial regulatory proteins, tetR family BXU06_15670 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BXU06_15670 PF00391 PEP-utilising enzyme, mobile domain BXU06_15680 PF03358 NADPH-dependent FMN reductase BXU06_15690 PF03466 LysR substrate binding domain BXU06_15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_15700 PF02321 Outer membrane efflux protein BXU06_15710 PF07690 Major Facilitator Superfamily BXU06_15715 PF00171 Aldehyde dehydrogenase family BXU06_15720 PF01925 Sulfite exporter TauE/SafE BXU06_15725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BXU06_15725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BXU06_15730 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BXU06_15735 PF02233 NAD(P) transhydrogenase beta subunit BXU06_15785 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BXU06_15790 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BXU06_15820 PF15723 Motility quorum-sensing regulator, toxin of MqsA BXU06_15825 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BXU06_15855 PF00211 Adenylate and Guanylate cyclase catalytic domain BXU06_15860 PF00534 Glycosyl transferases group 1 BXU06_15860 PF13439 Glycosyltransferase Family 4 BXU06_15870 PF07885 Ion channel BXU06_15870 PF00027 Cyclic nucleotide-binding domain BXU06_15875 PF08241 Methyltransferase domain BXU06_15880 PF00005 ABC transporter BXU06_15890 PF01050 Mannose-6-phosphate isomerase BXU06_15890 PF00483 Nucleotidyl transferase BXU06_15895 PF16363 GDP-mannose 4,6 dehydratase BXU06_15900 PF16363 GDP-mannose 4,6 dehydratase BXU06_15905 PF00005 ABC transporter BXU06_15905 PF00664 ABC transporter transmembrane region BXU06_15910 PF00529 HlyD membrane-fusion protein of T1SS BXU06_15915 PF02321 Outer membrane efflux protein BXU06_15920 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BXU06_15925 PF04321 RmlD substrate binding domain BXU06_15935 PF02780 Transketolase, C-terminal domain BXU06_15935 PF02779 Transketolase, pyrimidine binding domain BXU06_15935 PF00456 Transketolase, thiamine diphosphate binding domain BXU06_15940 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BXU06_15940 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BXU06_15945 PF00162 Phosphoglycerate kinase BXU06_15955 PF01810 LysE type translocator BXU06_15960 PF01116 Fructose-bisphosphate aldolase class-II BXU06_15965 PF00589 Phage integrase family BXU06_16015 PF00267 Gram-negative porin BXU06_16020 PF01047 MarR family BXU06_16025 PF02911 Formyl transferase, C-terminal domain BXU06_16025 PF00551 Formyl transferase BXU06_16030 PF01327 Polypeptide deformylase BXU06_16065 PF00529 HlyD membrane-fusion protein of T1SS BXU06_16065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BXU06_16070 PF00873 AcrB/AcrD/AcrF family BXU06_16075 PF02321 Outer membrane efflux protein BXU06_16080 PF00206 Lyase BXU06_16080 PF10415 Fumarase C C-terminus BXU06_16090 PF00881 Nitroreductase family BXU06_16095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_16095 PF03459 TOBE domain BXU06_16100 PF00005 ABC transporter BXU06_16105 PF00528 Binding-protein-dependent transport system inner membrane component BXU06_16110 PF00296 Luciferase-like monooxygenase BXU06_16115 PF09084 NMT1/THI5 like BXU06_16120 PF03358 NADPH-dependent FMN reductase BXU06_16125 PF05532 CsbD-like BXU06_16135 PF12729 Four helix bundle sensory module for signal transduction BXU06_16135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_16135 PF00672 HAMP domain BXU06_16155 PF00266 Aminotransferase class-V BXU06_16165 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_16180 PF13808 DDE_Tnp_1-associated BXU06_16180 PF01609 Transposase DDE domain BXU06_16190 PF00005 ABC transporter BXU06_16195 PF00005 ABC transporter BXU06_16195 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_16210 PF07992 Pyridine nucleotide-disulphide oxidoreductase BXU06_16210 PF14759 Reductase C-terminal BXU06_16215 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU06_16220 PF00106 short chain dehydrogenase BXU06_16225 PF00355 Rieske [2Fe-2S] domain BXU06_16230 PF00866 Ring hydroxylating beta subunit BXU06_16235 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BXU06_16235 PF00355 Rieske [2Fe-2S] domain BXU06_16240 PF03466 LysR substrate binding domain BXU06_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_16245 PF00561 alpha/beta hydrolase fold BXU06_16250 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU06_16255 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_16255 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BXU06_16260 PF07836 DmpG-like communication domain BXU06_16260 PF00682 HMGL-like BXU06_16265 PF06906 Protein of unknown function (DUF1272) BXU06_16270 PF03466 LysR substrate binding domain BXU06_16270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BXU06_16275 PF00881 Nitroreductase family BXU06_16285 PF00171 Aldehyde dehydrogenase family BXU06_16290 PF00202 Aminotransferase class-III BXU06_16295 PF00392 Bacterial regulatory proteins, gntR family BXU06_16295 PF00155 Aminotransferase class I and II BXU06_16300 PF02743 Cache domain BXU06_16300 PF00672 HAMP domain BXU06_16300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_16310 PF12833 Helix-turn-helix domain BXU06_16330 PF02321 Outer membrane efflux protein BXU06_16335 PF00873 AcrB/AcrD/AcrF family BXU06_16345 PF00440 Bacterial regulatory proteins, tetR family BXU06_16350 PF00696 Amino acid kinase family BXU06_16365 PF02627 Carboxymuconolactone decarboxylase family BXU06_16370 PF01464 Transglycosylase SLT domain BXU06_16370 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BXU06_16375 PF03129 Anticodon binding domain BXU06_16375 PF04073 Aminoacyl-tRNA editing domain BXU06_16375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BXU06_16380 PF02705 K+ potassium transporter BXU06_16385 PF01510 N-acetylmuramoyl-L-alanine amidase BXU06_16395 PF00923 Transaldolase/Fructose-6-phosphate aldolase BXU06_16420 PF11808 Phosphate regulon sensor protein PhoR BXU06_16420 PF00989 PAS fold BXU06_16420 PF00512 His Kinase A (phospho-acceptor) domain BXU06_16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_16425 PF00486 Transcriptional regulatory protein, C terminal BXU06_16425 PF00072 Response regulator receiver domain BXU06_16430 PF07578 Lipid A Biosynthesis N-terminal domain BXU06_16430 PF02684 Lipid-A-disaccharide synthetase BXU06_16435 PF00892 EamA-like transporter family BXU06_16440 PF01037 Lrp/AsnC ligand binding domain BXU06_16445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_16445 PF00672 HAMP domain BXU06_16455 PF00575 S1 RNA binding domain BXU06_16455 PF08206 Ribonuclease B OB domain BXU06_16455 PF17876 Cold shock domain BXU06_16455 PF00773 RNB domain BXU06_16460 PF13368 Topoisomerase C-terminal repeat BXU06_16460 PF01751 Toprim domain BXU06_16460 PF01131 DNA topoisomerase BXU06_16465 PF04361 Protein of unknown function (DUF494) BXU06_16470 PF02481 DNA recombination-mediator protein A BXU06_16470 PF17782 DprA winged helix domain BXU06_16475 PF01488 Shikimate / quinate 5-dehydrogenase BXU06_16475 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BXU06_16475 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BXU06_16480 PF03462 PCRF domain BXU06_16480 PF00472 RF-1 domain BXU06_16495 PF00849 RNA pseudouridylate synthase BXU06_16495 PF01479 S4 domain BXU06_16500 PF01062 Bestrophin, RFP-TM, chloride channel BXU06_16505 PF00892 EamA-like transporter family BXU06_16510 PF01609 Transposase DDE domain BXU06_16510 PF13808 DDE_Tnp_1-associated BXU06_16525 PF01259 SAICAR synthetase BXU06_16535 PF02222 ATP-grasp domain BXU06_16535 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BXU06_16540 PF00731 AIR carboxylase BXU06_16545 PF05728 Uncharacterised protein family (UPF0227) BXU06_16550 PF00155 Aminotransferase class I and II BXU06_16560 PF01578 Cytochrome C assembly protein BXU06_16565 PF05140 ResB-like family BXU06_16570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU06_16575 PF01926 50S ribosome-binding GTPase BXU06_16585 PF05036 Sporulation related domain BXU06_16585 PF03330 Lytic transglycolase BXU06_16590 PF00588 SpoU rRNA Methylase family BXU06_16595 PF00156 Phosphoribosyl transferase domain BXU06_16600 PF04055 Radical SAM superfamily BXU06_16600 PF06968 Biotin and Thiamin Synthesis associated domain BXU06_16605 PF00155 Aminotransferase class I and II BXU06_16615 PF00437 Type II/IV secretion system protein BXU06_16620 PF01168 Alanine racemase, N-terminal domain BXU06_16625 PF14748 Pyrroline-5-carboxylate reductase dimerisation BXU06_16625 PF03807 NADP oxidoreductase coenzyme F420-dependent BXU06_16630 PF02325 YGGT family BXU06_16640 PF01258 Prokaryotic dksA/traR C4-type zinc finger BXU06_16645 PF00793 DAHP synthetase I family BXU06_16665 PF12804 MobA-like NTP transferase domain BXU06_16670 PF02391 MoaE protein BXU06_16675 PF02597 ThiS family BXU06_16695 PF00005 ABC transporter BXU06_16705 PF02321 Outer membrane efflux protein BXU06_16710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_16710 PF00672 HAMP domain BXU06_16710 PF02743 Cache domain BXU06_16715 PF00392 Bacterial regulatory proteins, gntR family BXU06_16715 PF00155 Aminotransferase class I and II BXU06_16725 PF03009 Glycerophosphoryl diester phosphodiesterase family BXU06_16730 PF01966 HD domain BXU06_16730 PF12627 Probable RNA and SrmB- binding site of polymerase A BXU06_16730 PF01743 Poly A polymerase head domain BXU06_16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_16735 PF08521 Two-component sensor kinase N-terminal BXU06_16735 PF00512 His Kinase A (phospho-acceptor) domain BXU06_16745 PF12706 Beta-lactamase superfamily domain BXU06_16750 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BXU06_16750 PF03070 TENA/THI-4/PQQC family BXU06_16755 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BXU06_16760 PF04055 Radical SAM superfamily BXU06_16760 PF13186 Iron-sulfur cluster-binding domain BXU06_16765 PF00196 Bacterial regulatory proteins, luxR family BXU06_16765 PF00072 Response regulator receiver domain BXU06_16770 PF05231 MASE1 BXU06_16770 PF07730 Histidine kinase BXU06_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BXU06_16775 PF01011 PQQ enzyme repeat BXU06_16775 PF13360 PQQ-like domain BXU06_16790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BXU06_16795 PF00196 Bacterial regulatory proteins, luxR family BXU06_16795 PF00072 Response regulator receiver domain BXU06_16805 PF07804 HipA-like C-terminal domain BXU06_16810 PF02954 Bacterial regulatory protein, Fis family BXU06_16810 PF06505 Activator of aromatic catabolism BXU06_16810 PF02830 V4R domain BXU06_16810 PF00158 Sigma-54 interaction domain BXU06_16820 PF02332 Methane/Phenol/Toluene Hydroxylase BXU06_16825 PF02406 MmoB/DmpM family BXU06_16830 PF04945 YHS domain BXU06_16830 PF02332 Methane/Phenol/Toluene Hydroxylase BXU06_16835 PF04663 Phenol hydroxylase conserved region BXU06_16840 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_16840 PF00970 Oxidoreductase FAD-binding domain BXU06_16840 PF00175 Oxidoreductase NAD-binding domain BXU06_16845 PF00392 Bacterial regulatory proteins, gntR family BXU06_16845 PF07729 FCD domain BXU06_16850 PF00111 2Fe-2S iron-sulfur cluster binding domain BXU06_16855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BXU06_16865 PF00171 Aldehyde dehydrogenase family BXU06_16870 PF00561 alpha/beta hydrolase fold BXU06_16880 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_16880 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BXU06_16885 PF00682 HMGL-like BXU06_16885 PF07836 DmpG-like communication domain BXU06_16895 PF01361 Tautomerase enzyme BXU06_16905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_16910 PF13181 Tetratricopeptide repeat BXU06_16910 PF01435 Peptidase family M48 BXU06_16930 PF04143 Sulphur transport BXU06_16945 PF02682 Carboxyltransferase domain, subdomain C and D BXU06_16950 PF02626 Carboxyltransferase domain, subdomain A and B BXU06_16955 PF00484 Carbonic anhydrase BXU06_16960 PF01467 Cytidylyltransferase-like BXU06_16970 PF02590 Predicted SPOUT methyltransferase BXU06_16975 PF02463 RecF/RecN/SMC N terminal domain BXU06_16985 PF17200 Single Cache domain 2 BXU06_16985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_16985 PF00672 HAMP domain BXU06_16990 PF01432 Peptidase family M3 BXU06_16995 PF00132 Bacterial transferase hexapeptide (six repeats) BXU06_17005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BXU06_17005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BXU06_17005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BXU06_17010 PF01370 NAD dependent epimerase/dehydratase family BXU06_17025 PF00486 Transcriptional regulatory protein, C terminal BXU06_17025 PF00072 Response regulator receiver domain BXU06_17030 PF09339 IclR helix-turn-helix domain BXU06_17030 PF01614 Bacterial transcriptional regulator BXU06_17035 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BXU06_17040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BXU06_17045 PF01613 Flavin reductase like domain BXU06_17050 PF13458 Periplasmic binding protein BXU06_17055 PF01557 Fumarylacetoacetate (FAA) hydrolase family BXU06_17060 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation BXU06_17060 PF01118 Semialdehyde dehydrogenase, NAD binding domain BXU06_17065 PF07836 DmpG-like communication domain BXU06_17065 PF00682 HMGL-like BXU06_17070 PF00005 ABC transporter BXU06_17070 PF12399 Branched-chain amino acid ATP-binding cassette transporter BXU06_17085 PF00561 alpha/beta hydrolase fold BXU06_17090 PF00267 Gram-negative porin BXU06_17095 PF08447 PAS fold BXU06_17095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_17100 PF13426 PAS domain BXU06_17100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_17100 PF08447 PAS fold BXU06_17110 PF07690 Major Facilitator Superfamily BXU06_17115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BXU06_17115 PF17200 Single Cache domain 2 BXU06_17115 PF00672 HAMP domain BXU06_17120 PF00171 Aldehyde dehydrogenase family BXU06_17125 PF13520 Amino acid permease BXU06_17130 PF00202 Aminotransferase class-III BXU06_17140 PF01385 Probable transposase BXU06_17140 PF07282 Putative transposase DNA-binding domain BXU06_17140 PF12323 Helix-turn-helix domain BXU06_17145 PF12833 Helix-turn-helix domain BXU06_17165 PF17946 RecC C-terminal domain BXU06_17170 PF13361 UvrD-like helicase C-terminal domain BXU06_17170 PF00580 UvrD/REP helicase N-terminal domain BXU06_17170 PF12705 PD-(D/E)XK nuclease superfamily BXU06_17175 PF13538 UvrD-like helicase C-terminal domain BXU06_17180 PF05231 MASE1 BXU06_17180 PF00563 EAL domain BXU06_17185 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BXU06_17190 PF03922 OmpW family BXU06_17200 PF01300 Telomere recombination BXU06_17205 PF01618 MotA/TolQ/ExbB proton channel family BXU06_17220 PF01609 Transposase DDE domain BXU06_17220 PF05598 Transposase domain (DUF772) BXU06_17230 PF01926 50S ribosome-binding GTPase BXU06_17230 PF12631 MnmE helical domain BXU06_17230 PF10396 GTP-binding protein TrmE N-terminus BXU06_17235 PF14849 YidC periplasmic domain BXU06_17235 PF02096 60Kd inner membrane protein BXU06_17240 PF01809 Putative membrane protein insertion efficiency factor BXU06_17245 PF00825 Ribonuclease P BXU06_17250 PF00468 Ribosomal protein L34