locus-tag class description CUN60_00010 PF00534 Glycosyl transferases group 1 CUN60_00020 PF00005 ABC transporter CUN60_00070 PF00301 Rubredoxin CUN60_00075 PF01432 Peptidase family M3 CUN60_00085 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_00085 PF14602 Hexapeptide repeat of succinyl-transferase CUN60_00085 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CUN60_00090 PF00293 NUDIX domain CUN60_00090 PF09297 NADH pyrophosphatase zinc ribbon domain CUN60_00105 PF02347 Glycine cleavage system P-protein CUN60_00110 PF01597 Glycine cleavage H-protein CUN60_00115 PF08669 Glycine cleavage T-protein C-terminal barrel domain CUN60_00115 PF01571 Aminomethyltransferase folate-binding domain CUN60_00155 PF11940 Domain of unknown function (DUF3458) Ig-like fold CUN60_00155 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CUN60_00155 PF01433 Peptidase family M1 domain CUN60_00160 PF07690 Major Facilitator Superfamily CUN60_00185 PF01790 Prolipoprotein diacylglyceryl transferase CUN60_00190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CUN60_00190 PF00056 lactate/malate dehydrogenase, NAD binding domain CUN60_00205 PF07690 Major Facilitator Superfamily CUN60_00210 PF00326 Prolyl oligopeptidase family CUN60_00210 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CUN60_00230 PF00684 DnaJ central domain CUN60_00230 PF01556 DnaJ C terminal domain CUN60_00230 PF00226 DnaJ domain CUN60_00235 PF00375 Sodium:dicarboxylate symporter family CUN60_00250 PF03006 Haemolysin-III related CUN60_00255 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_00265 PF00581 Rhodanese-like domain CUN60_00265 PF11127 Protein of unknown function (DUF2892) CUN60_00270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUN60_00270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_00275 PF09186 Domain of unknown function (DUF1949) CUN60_00275 PF01205 Uncharacterized protein family UPF0029 CUN60_00280 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CUN60_00290 PF00578 AhpC/TSA family CUN60_00295 PF02627 Carboxymuconolactone decarboxylase family CUN60_00300 PF00210 Ferritin-like domain CUN60_00310 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_00315 PF13426 PAS domain CUN60_00315 PF01740 STAS domain CUN60_00335 PF00005 ABC transporter CUN60_00335 PF09383 NIL domain CUN60_00340 PF02405 Permease MlaE CUN60_00345 PF01066 CDP-alcohol phosphatidyltransferase CUN60_00350 PF02666 Phosphatidylserine decarboxylase CUN60_00355 PF00912 Transglycosylase CUN60_00355 PF00905 Penicillin binding protein transpeptidase domain CUN60_00355 PF17092 Penicillin-binding protein OB-like domain CUN60_00360 PF00958 GMP synthase C terminal domain CUN60_00360 PF00117 Glutamine amidotransferase class-I CUN60_00360 PF02540 NAD synthase CUN60_00365 PF00696 Amino acid kinase family CUN60_00375 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CUN60_00385 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUN60_00385 PF00205 Thiamine pyrophosphate enzyme, central domain CUN60_00385 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUN60_00390 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CUN60_00390 PF18416 N-acetylglucosamine binding protein domain 2 CUN60_00415 PF00892 EamA-like transporter family CUN60_00420 PF03069 Acetamidase/Formamidase family CUN60_00425 PF00141 Peroxidase CUN60_00455 PF04055 Radical SAM superfamily CUN60_00460 PF01242 6-pyruvoyl tetrahydropterin synthase CUN60_00465 PF06508 Queuosine biosynthesis protein QueC CUN60_00470 PF14489 QueF-like protein CUN60_00470 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CUN60_00475 PF01227 GTP cyclohydrolase I CUN60_00490 PF03144 Elongation factor Tu domain 2 CUN60_00490 PF06421 GTP-binding protein LepA C-terminus CUN60_00490 PF00009 Elongation factor Tu GTP binding domain CUN60_00490 PF00679 Elongation factor G C-terminus CUN60_00500 PF00694 Aconitase C-terminal domain CUN60_00500 PF00330 Aconitase family (aconitate hydratase) CUN60_00515 PF07690 Major Facilitator Superfamily CUN60_00530 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CUN60_00530 PF13378 Enolase C-terminal domain-like CUN60_00535 PF00596 Class II Aldolase and Adducin N-terminal domain CUN60_00570 PF02580 D-Tyr-tRNA(Tyr) deacylase CUN60_00575 PF01371 Trp repressor protein CUN60_00580 PF08338 Domain of unknown function (DUF1731) CUN60_00580 PF01370 NAD dependent epimerase/dehydratase family CUN60_00615 PF00501 AMP-binding enzyme CUN60_00615 PF13193 AMP-binding enzyme C-terminal domain CUN60_00625 PF01645 Conserved region in glutamate synthase CUN60_00640 PF01979 Amidohydrolase family CUN60_00645 PF04545 Sigma-70, region 4 CUN60_00645 PF00140 Sigma-70 factor, region 1.2 CUN60_00645 PF04542 Sigma-70 region 2 CUN60_00650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_00650 PF03466 LysR substrate binding domain CUN60_00655 PF00398 Ribosomal RNA adenine dimethylase CUN60_00660 PF00501 AMP-binding enzyme CUN60_00660 PF13193 AMP-binding enzyme C-terminal domain CUN60_00665 PF01202 Shikimate kinase CUN60_00670 PF00263 Bacterial type II and III secretion system protein CUN60_00670 PF03958 Bacterial type II/III secretion system short domain CUN60_00670 PF11741 AMIN domain CUN60_00670 PF07660 Secretin and TonB N terminus short domain CUN60_00675 PF11741 AMIN domain CUN60_00675 PF03958 Bacterial type II/III secretion system short domain CUN60_00675 PF07660 Secretin and TonB N terminus short domain CUN60_00675 PF00263 Bacterial type II and III secretion system protein CUN60_00705 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CUN60_00705 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CUN60_00710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUN60_00710 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUN60_00715 PF00231 ATP synthase CUN60_00720 PF02874 ATP synthase alpha/beta family, beta-barrel domain CUN60_00720 PF00306 ATP synthase alpha/beta chain, C terminal domain CUN60_00720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUN60_00725 PF00213 ATP synthase delta (OSCP) subunit CUN60_00730 PF00430 ATP synthase B/B' CF(0) CUN60_00735 PF00137 ATP synthase subunit C CUN60_00740 PF00119 ATP synthase A chain CUN60_00750 PF09190 DALR domain CUN60_00750 PF01406 tRNA synthetases class I (C) catalytic domain CUN60_00755 PF02954 Bacterial regulatory protein, Fis family CUN60_00755 PF00072 Response regulator receiver domain CUN60_00755 PF00158 Sigma-54 interaction domain CUN60_00760 PF00512 His Kinase A (phospho-acceptor) domain CUN60_00760 PF00672 HAMP domain CUN60_00760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_00765 PF01189 16S rRNA methyltransferase RsmB/F CUN60_00765 PF01029 NusB family CUN60_00770 PF00970 Oxidoreductase FAD-binding domain CUN60_00770 PF00175 Oxidoreductase NAD-binding domain CUN60_00785 PF00534 Glycosyl transferases group 1 CUN60_00785 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CUN60_00790 PF00106 short chain dehydrogenase CUN60_00795 PF13614 AAA domain CUN60_00795 PF13614 AAA domain CUN60_00825 PF03167 Uracil DNA glycosylase superfamily CUN60_00840 PF01208 Uroporphyrinogen decarboxylase (URO-D) CUN60_00845 PF00293 NUDIX domain CUN60_00850 PF07155 ECF-type riboflavin transporter, S component CUN60_00855 PF00005 ABC transporter CUN60_00855 PF12558 ATP-binding cassette cobalt transporter CUN60_00860 PF02361 Cobalt transport protein CUN60_00865 PF00171 Aldehyde dehydrogenase family CUN60_00865 PF01619 Proline dehydrogenase CUN60_00865 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CUN60_00865 PF14850 DNA-binding domain of Proline dehydrogenase CUN60_00885 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUN60_00890 PF00549 CoA-ligase CUN60_00890 PF02629 CoA binding domain CUN60_00895 PF00549 CoA-ligase CUN60_00895 PF08442 ATP-grasp domain CUN60_00905 PF00082 Subtilase family CUN60_00905 PF04151 Bacterial pre-peptidase C-terminal domain CUN60_00920 PF00270 DEAD/DEAH box helicase CUN60_00920 PF00271 Helicase conserved C-terminal domain CUN60_00920 PF17191 RecG wedge domain CUN60_00925 PF00873 AcrB/AcrD/AcrF family CUN60_00935 PF01027 Inhibitor of apoptosis-promoting Bax1 CUN60_00940 PF04851 Type III restriction enzyme, res subunit CUN60_00940 PF02151 UvrB/uvrC motif CUN60_00940 PF17757 UvrB interaction domain CUN60_00940 PF00271 Helicase conserved C-terminal domain CUN60_00940 PF12344 Ultra-violet resistance protein B CUN60_00945 PF00485 Phosphoribulokinase / Uridine kinase family CUN60_00950 PF00485 Phosphoribulokinase / Uridine kinase family CUN60_00985 PF02272 DHHA1 domain CUN60_00985 PF01411 tRNA synthetases class II (A) CUN60_00985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUN60_00990 PF00308 Bacterial dnaA protein CUN60_00990 PF11638 DnaA N-terminal domain CUN60_00990 PF08299 Bacterial dnaA protein helix-turn-helix CUN60_00995 PF02768 DNA polymerase III beta subunit, C-terminal domain CUN60_00995 PF02767 DNA polymerase III beta subunit, central domain CUN60_00995 PF00712 DNA polymerase III beta subunit, N-terminal domain CUN60_01000 PF01751 Toprim domain CUN60_01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_01000 PF18053 DNA gyrase B subunit insert domain CUN60_01000 PF00986 DNA gyrase B subunit, carboxyl terminus CUN60_01000 PF00204 DNA gyrase B CUN60_01005 PF01048 Phosphorylase superfamily CUN60_01015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUN60_01025 PF00149 Calcineurin-like phosphoesterase CUN60_01030 PF01327 Polypeptide deformylase CUN60_01050 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUN60_01050 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CUN60_01060 PF03466 LysR substrate binding domain CUN60_01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_01065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CUN60_01080 PF00860 Permease family CUN60_01120 PF06761 Intracellular multiplication and human macrophage-killing CUN60_01120 PF14331 ImcF-related N-terminal domain CUN60_01120 PF06744 Type VI secretion protein IcmF C-terminal CUN60_01130 PF02798 Glutathione S-transferase, N-terminal domain CUN60_01140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUN60_01145 PF02321 Outer membrane efflux protein CUN60_01155 PF03466 LysR substrate binding domain CUN60_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_01165 PF00196 Bacterial regulatory proteins, luxR family CUN60_01165 PF00072 Response regulator receiver domain CUN60_01175 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CUN60_01175 PF04055 Radical SAM superfamily CUN60_01185 PF05958 tRNA (Uracil-5-)-methyltransferase CUN60_01195 PF04305 Protein of unknown function (DUF455) CUN60_01200 PF06481 COX Aromatic Rich Motif CUN60_01200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CUN60_01210 PF00510 Cytochrome c oxidase subunit III CUN60_01215 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CUN60_01220 PF01040 UbiA prenyltransferase family CUN60_01225 PF07690 Major Facilitator Superfamily CUN60_01230 PF06470 SMC proteins Flexible Hinge Domain CUN60_01230 PF02463 RecF/RecN/SMC N terminal domain CUN60_01235 PF02622 Uncharacterized ACR, COG1678 CUN60_01240 PF03652 Holliday junction resolvase CUN60_01250 PF01494 FAD binding domain CUN60_01260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CUN60_01270 PF01012 Electron transfer flavoprotein domain CUN60_01270 PF00766 Electron transfer flavoprotein FAD-binding domain CUN60_01275 PF01012 Electron transfer flavoprotein domain CUN60_01280 PF03358 NADPH-dependent FMN reductase CUN60_01285 PF01476 LysM domain CUN60_01285 PF01464 Transglycosylase SLT domain CUN60_01290 PF03313 Serine dehydratase alpha chain CUN60_01290 PF03315 Serine dehydratase beta chain CUN60_01295 PF12111 Polyribonucleotide phosphorylase C terminal CUN60_01295 PF10150 Ribonuclease E/G family CUN60_01295 PF00575 S1 RNA binding domain CUN60_01300 PF01479 S4 domain CUN60_01300 PF00849 RNA pseudouridylate synthase CUN60_01310 PF08240 Alcohol dehydrogenase GroES-like domain CUN60_01310 PF00107 Zinc-binding dehydrogenase CUN60_01315 PF00155 Aminotransferase class I and II CUN60_01320 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CUN60_01320 PF01502 Phosphoribosyl-AMP cyclohydrolase CUN60_01325 PF00977 Histidine biosynthesis protein CUN60_01330 PF13180 PDZ domain CUN60_01335 PF02540 NAD synthase CUN60_01335 PF00795 Carbon-nitrogen hydrolase CUN60_01360 PF13520 Amino acid permease CUN60_01365 PF02321 Outer membrane efflux protein CUN60_01370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_01370 PF03466 LysR substrate binding domain CUN60_01380 PF13932 GidA associated domain CUN60_01380 PF01134 Glucose inhibited division protein A CUN60_01395 PF13419 Haloacid dehalogenase-like hydrolase CUN60_01400 PF03055 Retinal pigment epithelial membrane protein CUN60_01405 PF13417 Glutathione S-transferase, N-terminal domain CUN60_01410 PF01180 Dihydroorotate dehydrogenase CUN60_01420 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CUN60_01420 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CUN60_01425 PF00175 Oxidoreductase NAD-binding domain CUN60_01425 PF00111 2Fe-2S iron-sulfur cluster binding domain CUN60_01425 PF00970 Oxidoreductase FAD-binding domain CUN60_01485 PF02607 B12 binding domain CUN60_01485 PF02965 Vitamin B12 dependent methionine synthase, activation domain CUN60_01485 PF00809 Pterin binding enzyme CUN60_01485 PF02574 Homocysteine S-methyltransferase CUN60_01485 PF02310 B12 binding domain CUN60_01490 PF03091 CutA1 divalent ion tolerance protein CUN60_01495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CUN60_01500 PF18416 N-acetylglucosamine binding protein domain 2 CUN60_01500 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CUN60_01505 PF01048 Phosphorylase superfamily CUN60_01510 PF06314 Acetoacetate decarboxylase (ADC) CUN60_01515 PF02092 Glycyl-tRNA synthetase beta subunit CUN60_01515 PF05746 DALR anticodon binding domain CUN60_01530 PF04452 RNA methyltransferase CUN60_01540 PF00005 ABC transporter CUN60_01540 PF06472 ABC transporter transmembrane region 2 CUN60_01545 PF00348 Polyprenyl synthetase CUN60_01550 PF14437 MafB19-like deaminase CUN60_01555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUN60_01585 PF07690 Major Facilitator Superfamily CUN60_01600 PF04055 Radical SAM superfamily CUN60_01600 PF18693 TRAM domain CUN60_01600 PF00919 Uncharacterized protein family UPF0004 CUN60_01605 PF05233 PHB accumulation regulatory domain CUN60_01605 PF07879 PHB/PHA accumulation regulator DNA-binding domain CUN60_01615 PF00211 Adenylate and Guanylate cyclase catalytic domain CUN60_01625 PF03060 Nitronate monooxygenase CUN60_01630 PF00005 ABC transporter CUN60_01630 PF12848 ABC transporter CUN60_01655 PF00842 Alanine racemase, C-terminal domain CUN60_01655 PF01168 Alanine racemase, N-terminal domain CUN60_01665 PF00731 AIR carboxylase CUN60_01670 PF02222 ATP-grasp domain CUN60_01670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CUN60_01675 PF00854 POT family CUN60_01685 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_01685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUN60_01695 PF02540 NAD synthase CUN60_01695 PF00958 GMP synthase C terminal domain CUN60_01695 PF00117 Glutamine amidotransferase class-I CUN60_01700 PF13476 AAA domain CUN60_01710 PF01272 Transcription elongation factor, GreA/GreB, C-term CUN60_01710 PF03449 Transcription elongation factor, N-terminal CUN60_01720 PF10417 C-terminal domain of 1-Cys peroxiredoxin CUN60_01720 PF00578 AhpC/TSA family CUN60_01725 PF01784 NIF3 (NGG1p interacting factor 3) CUN60_01735 PF00561 alpha/beta hydrolase fold CUN60_01755 PF00392 Bacterial regulatory proteins, gntR family CUN60_01755 PF07729 FCD domain CUN60_01760 PF04055 Radical SAM superfamily CUN60_01760 PF06968 Biotin and Thiamin Synthesis associated domain CUN60_01765 PF00155 Aminotransferase class I and II CUN60_01775 PF08241 Methyltransferase domain CUN60_01785 PF00202 Aminotransferase class-III CUN60_01810 PF00037 4Fe-4S binding domain CUN60_01810 PF11953 Domain of unknown function (DUF3470) CUN60_01815 PF02803 Thiolase, C-terminal domain CUN60_01815 PF00108 Thiolase, N-terminal domain CUN60_01820 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CUN60_01825 PF00999 Sodium/hydrogen exchanger family CUN60_01830 PF01678 Diaminopimelate epimerase CUN60_01845 PF00849 RNA pseudouridylate synthase CUN60_01845 PF01479 S4 domain CUN60_01860 PF00267 Gram-negative porin CUN60_01870 PF13533 Biotin-lipoyl like CUN60_01875 PF00873 AcrB/AcrD/AcrF family CUN60_01885 PF00873 AcrB/AcrD/AcrF family CUN60_01890 PF00873 AcrB/AcrD/AcrF family CUN60_01895 PF01544 CorA-like Mg2+ transporter protein CUN60_01900 PF01812 5-formyltetrahydrofolate cyclo-ligase family CUN60_01905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CUN60_01915 PF13091 PLD-like domain CUN60_01925 PF01136 Peptidase family U32 CUN60_01925 PF16325 Peptidase family U32 C-terminal domain CUN60_01930 PF00854 POT family CUN60_01940 PF00083 Sugar (and other) transporter CUN60_01940 PF08946 Osmosensory transporter coiled coil CUN60_01945 PF01965 DJ-1/PfpI family CUN60_01955 PF04264 YceI-like domain CUN60_01960 PF00270 DEAD/DEAH box helicase CUN60_01960 PF00271 Helicase conserved C-terminal domain CUN60_01960 PF17764 3′ DNA-binding domain (3′BD) CUN60_01960 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CUN60_01960 PF18074 Primosomal protein N C-terminal domain CUN60_01970 PF00106 short chain dehydrogenase CUN60_01980 PF01327 Polypeptide deformylase CUN60_01990 PF17782 DprA winged helix domain CUN60_01990 PF02481 DNA recombination-mediator protein A CUN60_02020 PF03144 Elongation factor Tu domain 2 CUN60_02020 PF00009 Elongation factor Tu GTP binding domain CUN60_02020 PF03143 Elongation factor Tu C-terminal domain CUN60_02035 PF00467 KOW motif CUN60_02035 PF02357 Transcription termination factor nusG CUN60_02040 PF03167 Uracil DNA glycosylase superfamily CUN60_02050 PF00814 Glycoprotease family CUN60_02055 PF00871 Acetokinase family CUN60_02060 PF06969 HemN C-terminal domain CUN60_02060 PF04055 Radical SAM superfamily CUN60_02065 PF00842 Alanine racemase, C-terminal domain CUN60_02065 PF01168 Alanine racemase, N-terminal domain CUN60_02070 PF01022 Bacterial regulatory protein, arsR family CUN60_02110 PF02381 MraZ protein, putative antitoxin-like CUN60_02115 PF01795 MraW methylase family CUN60_02125 PF03717 Penicillin-binding Protein dimerisation domain CUN60_02125 PF00905 Penicillin binding protein transpeptidase domain CUN60_02130 PF01225 Mur ligase family, catalytic domain CUN60_02130 PF02875 Mur ligase family, glutamate ligase domain CUN60_02130 PF08245 Mur ligase middle domain CUN60_02135 PF01225 Mur ligase family, catalytic domain CUN60_02135 PF08245 Mur ligase middle domain CUN60_02135 PF02875 Mur ligase family, glutamate ligase domain CUN60_02140 PF00953 Glycosyl transferase family 4 CUN60_02145 PF08245 Mur ligase middle domain CUN60_02145 PF02875 Mur ligase family, glutamate ligase domain CUN60_02150 PF01098 Cell cycle protein CUN60_02155 PF04101 Glycosyltransferase family 28 C-terminal domain CUN60_02155 PF03033 Glycosyltransferase family 28 N-terminal domain CUN60_02160 PF01966 HD domain CUN60_02160 PF13286 Phosphohydrolase-associated domain CUN60_02165 PF04607 Region found in RelA / SpoT proteins CUN60_02165 PF13291 ACT domain CUN60_02165 PF02824 TGS domain CUN60_02175 PF00854 POT family CUN60_02180 PF02609 Exonuclease VII small subunit CUN60_02185 PF00348 Polyprenyl synthetase CUN60_02190 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CUN60_02190 PF02779 Transketolase, pyrimidine binding domain CUN60_02190 PF02780 Transketolase, C-terminal domain CUN60_02205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CUN60_02210 PF16874 Glycosyl hydrolase family 36 C-terminal domain CUN60_02210 PF16875 Glycosyl hydrolase family 36 N-terminal domain CUN60_02220 PF08533 Beta-galactosidase C-terminal domain CUN60_02220 PF08532 Beta-galactosidase trimerisation domain CUN60_02220 PF02449 Beta-galactosidase CUN60_02230 PF03989 DNA gyrase C-terminal domain, beta-propeller CUN60_02230 PF00521 DNA gyrase/topoisomerase IV, subunit A CUN60_02240 PF00572 Ribosomal protein L13 CUN60_02245 PF00380 Ribosomal protein S9/S16 CUN60_02260 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA CUN60_02265 PF07687 Peptidase dimerisation domain CUN60_02265 PF01546 Peptidase family M20/M25/M40 CUN60_02275 PF00474 Sodium:solute symporter family CUN60_02290 PF00696 Amino acid kinase family CUN60_02290 PF01842 ACT domain CUN60_02295 PF03976 Polyphosphate kinase 2 (PPK2) CUN60_02300 PF01053 Cys/Met metabolism PLP-dependent enzyme CUN60_02305 PF16123 Hydroxyacylglutathione hydrolase C-terminus CUN60_02305 PF00753 Metallo-beta-lactamase superfamily CUN60_02310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUN60_02315 PF02875 Mur ligase family, glutamate ligase domain CUN60_02315 PF08245 Mur ligase middle domain CUN60_02315 PF08443 RimK-like ATP-grasp domain CUN60_02320 PF08245 Mur ligase middle domain CUN60_02320 PF08443 RimK-like ATP-grasp domain CUN60_02320 PF02875 Mur ligase family, glutamate ligase domain CUN60_02325 PF03575 Peptidase family S51 CUN60_02330 PF01112 Asparaginase CUN60_02340 PF01042 Endoribonuclease L-PSP CUN60_02345 PF02525 Flavodoxin-like fold CUN60_02360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CUN60_02360 PF05698 Bacterial trigger factor protein (TF) C-terminus CUN60_02360 PF05697 Bacterial trigger factor protein (TF) CUN60_02370 PF01494 FAD binding domain CUN60_02375 PF01494 FAD binding domain CUN60_02380 PF10411 Disulfide bond isomerase protein N-terminus CUN60_02380 PF13098 Thioredoxin-like domain CUN60_02390 PF16363 GDP-mannose 4,6 dehydratase CUN60_02395 PF13361 UvrD-like helicase C-terminal domain CUN60_02395 PF12705 PD-(D/E)XK nuclease superfamily CUN60_02395 PF00580 UvrD/REP helicase N-terminal domain CUN60_02400 PF13538 UvrD-like helicase C-terminal domain CUN60_02410 PF01292 Prokaryotic cytochrome b561 CUN60_02415 PF07690 Major Facilitator Superfamily CUN60_02420 PF00180 Isocitrate/isopropylmalate dehydrogenase CUN60_02425 PF07690 Major Facilitator Superfamily CUN60_02445 PF07690 Major Facilitator Superfamily CUN60_02455 PF07166 Protein of unknown function (DUF1398) CUN60_02475 PF03358 NADPH-dependent FMN reductase CUN60_02480 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CUN60_02485 PF02678 Pirin CUN60_02485 PF17954 Quercetinase C-terminal cupin domain CUN60_02495 PF00581 Rhodanese-like domain CUN60_02500 PF01725 Ham1 family CUN60_02505 PF00162 Phosphoglycerate kinase CUN60_02510 PF00152 tRNA synthetases class II (D, K and N) CUN60_02510 PF01336 OB-fold nucleic acid binding domain CUN60_02525 PF01926 50S ribosome-binding GTPase CUN60_02540 PF03755 YicC-like family, N-terminal region CUN60_02540 PF08340 Domain of unknown function (DUF1732) CUN60_02550 PF00462 Glutaredoxin CUN60_02555 PF02556 Preprotein translocase subunit SecB CUN60_02560 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CUN60_02560 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CUN60_02565 PF03548 Outer membrane lipoprotein carrier protein LolA CUN60_02570 PF02875 Mur ligase family, glutamate ligase domain CUN60_02570 PF01225 Mur ligase family, catalytic domain CUN60_02570 PF08245 Mur ligase middle domain CUN60_02575 PF01820 D-ala D-ala ligase N-terminus CUN60_02575 PF07478 D-ala D-ala ligase C-terminus CUN60_02580 PF08478 POTRA domain, FtsQ-type CUN60_02580 PF03799 Cell division protein FtsQ CUN60_02585 PF02491 SHS2 domain inserted in FTSA CUN60_02590 PF00091 Tubulin/FtsZ family, GTPase domain CUN60_02590 PF12327 FtsZ family, C-terminal domain CUN60_02595 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CUN60_02610 PF12804 MobA-like NTP transferase domain CUN60_02610 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_02610 PF14602 Hexapeptide repeat of succinyl-transferase CUN60_02615 PF02321 Outer membrane efflux protein CUN60_02620 PF00106 short chain dehydrogenase CUN60_02625 PF00270 DEAD/DEAH box helicase CUN60_02625 PF00271 Helicase conserved C-terminal domain CUN60_02695 PF02082 Transcriptional regulator CUN60_02700 PF00141 Peroxidase CUN60_02720 PF01042 Endoribonuclease L-PSP CUN60_02750 PF00255 Glutathione peroxidase CUN60_02765 PF01523 Putative modulator of DNA gyrase CUN60_02795 PF00150 Cellulase (glycosyl hydrolase family 5) CUN60_02795 PF00553 Cellulose binding domain CUN60_02800 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUN60_02800 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUN60_02805 PF01960 ArgJ family CUN60_02810 PF00696 Amino acid kinase family CUN60_02815 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUN60_02815 PF02774 Semialdehyde dehydrogenase, dimerisation domain CUN60_02820 PF00206 Lyase CUN60_02825 PF00764 Arginosuccinate synthase CUN60_02830 PF00117 Glutamine amidotransferase class-I CUN60_02830 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CUN60_02835 PF02142 MGS-like domain CUN60_02835 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUN60_02835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUN60_02840 PF00202 Aminotransferase class-III CUN60_02845 PF00909 Ammonium Transporter Family CUN60_02850 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_02850 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CUN60_02855 PF04898 Glutamate synthase central domain CUN60_02855 PF01493 GXGXG motif CUN60_02855 PF01645 Conserved region in glutamate synthase CUN60_02855 PF00310 Glutamine amidotransferases class-II CUN60_02860 PF00324 Amino acid permease CUN60_02865 PF00719 Inorganic pyrophosphatase CUN60_02870 PF03232 Ubiquinone biosynthesis protein COQ7 CUN60_02875 PF03306 Alpha-acetolactate decarboxylase CUN60_02885 PF00390 Malic enzyme, N-terminal domain CUN60_02885 PF03949 Malic enzyme, NAD binding domain CUN60_02890 PF09382 RQC domain CUN60_02890 PF16124 RecQ zinc-binding CUN60_02890 PF00570 HRDC domain CUN60_02890 PF00270 DEAD/DEAH box helicase CUN60_02890 PF00271 Helicase conserved C-terminal domain CUN60_02895 PF07690 Major Facilitator Superfamily CUN60_02900 PF01649 Ribosomal protein S20 CUN60_02905 PF00324 Amino acid permease CUN60_02910 PF00324 Amino acid permease CUN60_02915 PF02811 PHP domain CUN60_02920 PF09335 SNARE associated Golgi protein CUN60_02925 PF00857 Isochorismatase family CUN60_02935 PF03725 3' exoribonuclease family, domain 2 CUN60_02935 PF01138 3' exoribonuclease family, domain 1 CUN60_02955 PF02470 MlaD protein CUN60_02960 PF02405 Permease MlaE CUN60_02965 PF00005 ABC transporter CUN60_02970 PF01040 UbiA prenyltransferase family CUN60_02975 PF01541 GIY-YIG catalytic domain CUN60_02975 PF02151 UvrB/uvrC motif CUN60_02975 PF08459 UvrC Helix-hairpin-helix N-terminal CUN60_02980 PF01066 CDP-alcohol phosphatidyltransferase CUN60_02985 PF04546 Sigma-70, non-essential region CUN60_02985 PF03979 Sigma-70 factor, region 1.1 CUN60_02985 PF04545 Sigma-70, region 4 CUN60_02985 PF00140 Sigma-70 factor, region 1.2 CUN60_02985 PF04539 Sigma-70 region 3 CUN60_02985 PF04542 Sigma-70 region 2 CUN60_02995 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CUN60_03000 PF01625 Peptide methionine sulfoxide reductase CUN60_03025 PF02810 SEC-C motif CUN60_03030 PF00561 alpha/beta hydrolase fold CUN60_03035 PF03577 Peptidase family C69 CUN60_03040 PF01979 Amidohydrolase family CUN60_03045 PF00041 Fibronectin type III domain CUN60_03045 PF00704 Glycosyl hydrolases family 18 CUN60_03050 PF07724 AAA domain (Cdc48 subfamily) CUN60_03050 PF00004 ATPase family associated with various cellular activities (AAA) CUN60_03080 PF07963 Prokaryotic N-terminal methylation motif CUN60_03080 PF00114 Pilin (bacterial filament) CUN60_03085 PF07963 Prokaryotic N-terminal methylation motif CUN60_03085 PF00114 Pilin (bacterial filament) CUN60_03090 PF07963 Prokaryotic N-terminal methylation motif CUN60_03090 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CUN60_03125 PF01343 Peptidase family S49 CUN60_03135 PF02322 Cytochrome bd terminal oxidase subunit II CUN60_03140 PF01654 Cytochrome bd terminal oxidase subunit I CUN60_03170 PF00106 short chain dehydrogenase CUN60_03180 PF00355 Rieske [2Fe-2S] domain CUN60_03185 PF00145 C-5 cytosine-specific DNA methylase CUN60_03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_03190 PF00512 His Kinase A (phospho-acceptor) domain CUN60_03190 PF00989 PAS fold CUN60_03200 PF04055 Radical SAM superfamily CUN60_03200 PF00919 Uncharacterized protein family UPF0004 CUN60_03205 PF00875 DNA photolyase CUN60_03205 PF03441 FAD binding domain of DNA photolyase CUN60_03210 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CUN60_03215 PF13532 2OG-Fe(II) oxygenase superfamily CUN60_03220 PF00920 Dehydratase family CUN60_03225 PF03481 Putative GTP-binding controlling metal-binding CUN60_03225 PF01300 Telomere recombination CUN60_03235 PF00361 Proton-conducting membrane transporter CUN60_03235 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CUN60_03240 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CUN60_03245 PF00664 ABC transporter transmembrane region CUN60_03245 PF03412 Peptidase C39 family CUN60_03245 PF00005 ABC transporter CUN60_03270 PF01467 Cytidylyltransferase-like CUN60_03275 PF00156 Phosphoribosyl transferase domain CUN60_03295 PF08245 Mur ligase middle domain CUN60_03310 PF13090 Polyphosphate kinase C-terminal domain 2 CUN60_03310 PF17941 Polyphosphate kinase C-terminal domain 1 CUN60_03310 PF13089 Polyphosphate kinase N-terminal domain CUN60_03310 PF02503 Polyphosphate kinase middle domain CUN60_03330 PF00860 Permease family CUN60_03350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_03350 PF03466 LysR substrate binding domain CUN60_03365 PF04279 Intracellular septation protein A CUN60_03370 PF00121 Triosephosphate isomerase CUN60_03375 PF03840 Preprotein translocase SecG subunit CUN60_03385 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CUN60_03390 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CUN60_03395 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CUN60_03400 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CUN60_03415 PF10531 SLBB domain CUN60_03415 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CUN60_03415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CUN60_03420 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CUN60_03420 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CUN60_03420 PF00384 Molybdopterin oxidoreductase CUN60_03425 PF00146 NADH dehydrogenase CUN60_03430 PF12838 4Fe-4S dicluster domain CUN60_03435 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CUN60_03440 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CUN60_03445 PF00361 Proton-conducting membrane transporter CUN60_03445 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CUN60_03450 PF00361 Proton-conducting membrane transporter CUN60_03450 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CUN60_03455 PF00361 Proton-conducting membrane transporter CUN60_03460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUN60_03460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CUN60_03465 PF00483 Nucleotidyl transferase CUN60_03470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CUN60_03475 PF16363 GDP-mannose 4,6 dehydratase CUN60_03480 PF04321 RmlD substrate binding domain CUN60_03485 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CUN60_03485 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CUN60_03485 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CUN60_03490 PF00478 IMP dehydrogenase / GMP reductase domain CUN60_03495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_03495 PF03466 LysR substrate binding domain CUN60_03500 PF03668 P-loop ATPase protein family CUN60_03505 PF07475 HPr Serine kinase C-terminal domain CUN60_03505 PF02603 HPr Serine kinase N terminus CUN60_03520 PF02867 Ribonucleotide reductase, barrel domain CUN60_03520 PF03477 ATP cone domain CUN60_03520 PF00317 Ribonucleotide reductase, all-alpha domain CUN60_03525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_03525 PF03466 LysR substrate binding domain CUN60_03530 PF03466 LysR substrate binding domain CUN60_03530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_03540 PF03466 LysR substrate binding domain CUN60_03540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_03545 PF01367 5'-3' exonuclease, C-terminal SAM fold CUN60_03545 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CUN60_03545 PF00476 DNA polymerase family A CUN60_03545 PF01612 3'-5' exonuclease CUN60_03560 PF00710 Asparaginase, N-terminal CUN60_03560 PF17763 Glutaminase/Asparaginase C-terminal domain CUN60_03570 PF02545 Maf-like protein CUN60_03575 PF10150 Ribonuclease E/G family CUN60_03575 PF12111 Polyribonucleotide phosphorylase C terminal CUN60_03575 PF00575 S1 RNA binding domain CUN60_03585 PF07669 Eco57I restriction-modification methylase CUN60_03605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CUN60_03605 PF00156 Phosphoribosyl transferase domain CUN60_03610 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CUN60_03610 PF00117 Glutamine amidotransferase class-I CUN60_03615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUN60_03615 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CUN60_03615 PF02142 MGS-like domain CUN60_03620 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CUN60_03620 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CUN60_03625 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain CUN60_03625 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain CUN60_03640 PF07690 Major Facilitator Superfamily CUN60_03645 PF01914 MarC family integral membrane protein CUN60_03655 PF13276 HTH-like domain CUN60_03655 PF13333 Integrase core domain CUN60_03655 PF00665 Integrase core domain CUN60_03665 PF02926 THUMP domain CUN60_03665 PF01170 Putative RNA methylase family UPF0020 CUN60_03705 PF01258 Prokaryotic dksA/traR C4-type zinc finger CUN60_03740 PF00394 Multicopper oxidase CUN60_03740 PF07731 Multicopper oxidase CUN60_03740 PF07732 Multicopper oxidase CUN60_03745 PF04262 Glutamate-cysteine ligase CUN60_03745 PF18419 ATP-grasp-like domain CUN60_03745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CUN60_03760 PF14693 Ribosomal protein TL5, C-terminal domain CUN60_03760 PF01386 Ribosomal L25p family CUN60_03765 PF01195 Peptidyl-tRNA hydrolase CUN60_03770 PF13185 GAF domain CUN60_03775 PF07690 Major Facilitator Superfamily CUN60_03800 PF14031 Putative serine dehydratase domain CUN60_03800 PF01168 Alanine racemase, N-terminal domain CUN60_03820 PF00905 Penicillin binding protein transpeptidase domain CUN60_03830 PF01979 Amidohydrolase family CUN60_03835 PF07859 alpha/beta hydrolase fold CUN60_03845 PF00692 dUTPase CUN60_03855 PF01171 PP-loop family CUN60_03855 PF09179 TilS substrate binding domain CUN60_03855 PF11734 TilS substrate C-terminal domain CUN60_03860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CUN60_03875 PF00156 Phosphoribosyl transferase domain CUN60_03880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CUN60_03880 PF01676 Metalloenzyme superfamily CUN60_03885 PF01551 Peptidase family M23 CUN60_03895 PF00206 Lyase CUN60_03895 PF10415 Fumarase C C-terminus CUN60_03900 PF02417 Chromate transporter CUN60_03910 PF12368 Rhodanase C-terminal CUN60_03910 PF17773 UPF0176 acylphosphatase like domain CUN60_03910 PF00581 Rhodanese-like domain CUN60_03920 PF01783 Ribosomal L32p protein family CUN60_03925 PF02504 Fatty acid synthesis protein CUN60_03930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CUN60_03930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CUN60_03935 PF00698 Acyl transferase domain CUN60_03965 PF17384 RimP C-terminal SH3 domain CUN60_03965 PF02576 RimP N-terminal domain CUN60_03970 PF08529 NusA N-terminal domain CUN60_03970 PF13184 NusA-like KH domain CUN60_03975 PF11987 Translation-initiation factor 2 CUN60_03975 PF04760 Translation initiation factor IF-2, N-terminal region CUN60_03975 PF00009 Elongation factor Tu GTP binding domain CUN60_03975 PF08364 Bacterial translation initiation factor IF-2 associated region CUN60_03980 PF02033 Ribosome-binding factor A CUN60_03985 PF16198 tRNA pseudouridylate synthase B C-terminal domain CUN60_03985 PF09157 Pseudouridine synthase II TruB, C-terminal CUN60_03985 PF01509 TruB family pseudouridylate synthase (N terminal domain) CUN60_04010 PF00682 HMGL-like CUN60_04010 PF08502 LeuA allosteric (dimerisation) domain CUN60_04015 PF01037 Lrp/AsnC ligand binding domain CUN60_04025 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CUN60_04025 PF18416 N-acetylglucosamine binding protein domain 2 CUN60_04045 PF00529 HlyD membrane-fusion protein of T1SS CUN60_04045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUN60_04065 PF00480 ROK family CUN60_04075 PF00150 Cellulase (glycosyl hydrolase family 5) CUN60_04075 PF00553 Cellulose binding domain CUN60_04080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CUN60_04080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CUN60_04085 PF01467 Cytidylyltransferase-like CUN60_04090 PF01029 NusB family CUN60_04090 PF01189 16S rRNA methyltransferase RsmB/F CUN60_04095 PF07662 Na+ dependent nucleoside transporter C-terminus CUN60_04095 PF01773 Na+ dependent nucleoside transporter N-terminus CUN60_04100 PF07670 Nucleoside recognition CUN60_04100 PF07662 Na+ dependent nucleoside transporter C-terminus CUN60_04100 PF01773 Na+ dependent nucleoside transporter N-terminus CUN60_04105 PF01773 Na+ dependent nucleoside transporter N-terminus CUN60_04105 PF07662 Na+ dependent nucleoside transporter C-terminus CUN60_04115 PF01728 FtsJ-like methyltransferase CUN60_04120 PF00004 ATPase family associated with various cellular activities (AAA) CUN60_04120 PF17862 AAA+ lid domain CUN60_04120 PF06480 FtsH Extracellular CUN60_04120 PF01434 Peptidase family M41 CUN60_04125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUN60_04125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUN60_04125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUN60_04125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUN60_04130 PF09335 SNARE associated Golgi protein CUN60_04145 PF03932 CutC family CUN60_04160 PF00691 OmpA family CUN60_04170 PF07676 WD40-like Beta Propeller Repeat CUN60_04170 PF04052 TolB amino-terminal domain CUN60_04180 PF02472 Biopolymer transport protein ExbD/TolR CUN60_04185 PF01596 O-methyltransferase CUN60_04205 PF00293 NUDIX domain CUN60_04215 PF02780 Transketolase, C-terminal domain CUN60_04215 PF00456 Transketolase, thiamine diphosphate binding domain CUN60_04215 PF02779 Transketolase, pyrimidine binding domain CUN60_04220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CUN60_04220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CUN60_04240 PF03717 Penicillin-binding Protein dimerisation domain CUN60_04240 PF00905 Penicillin binding protein transpeptidase domain CUN60_04245 PF01098 Cell cycle protein CUN60_04250 PF04851 Type III restriction enzyme, res subunit CUN60_04250 PF08774 VRR-NUC domain CUN60_04260 PF01555 DNA methylase CUN60_04260 PF18273 Type III R-M EcoP15I C-terminal domain CUN60_04265 PF00005 ABC transporter CUN60_04275 PF00176 SNF2 family N-terminal domain CUN60_04275 PF00271 Helicase conserved C-terminal domain CUN60_04335 PF01926 50S ribosome-binding GTPase CUN60_04335 PF12631 MnmE helical domain CUN60_04335 PF10396 GTP-binding protein TrmE N-terminus CUN60_04345 PF04453 LPS transport system D CUN60_04350 PF09312 SurA N-terminal domain CUN60_04355 PF09312 SurA N-terminal domain CUN60_04360 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CUN60_04370 PF00679 Elongation factor G C-terminus CUN60_04370 PF00009 Elongation factor Tu GTP binding domain CUN60_04370 PF03144 Elongation factor Tu domain 2 CUN60_04385 PF00375 Sodium:dicarboxylate symporter family CUN60_04390 PF10415 Fumarase C C-terminus CUN60_04390 PF00206 Lyase CUN60_04395 PF00710 Asparaginase, N-terminal CUN60_04395 PF17763 Glutaminase/Asparaginase C-terminal domain CUN60_04400 PF00849 RNA pseudouridylate synthase CUN60_04400 PF01479 S4 domain CUN60_04405 PF10410 DnaB-helicase binding domain of primase CUN60_04405 PF08278 DNA primase DnaG DnaB-binding CUN60_04405 PF13662 Toprim domain CUN60_04405 PF08275 DNA primase catalytic core, N-terminal domain CUN60_04405 PF01807 CHC2 zinc finger CUN60_04410 PF13520 Amino acid permease CUN60_04425 PF00902 Sec-independent protein translocase protein (TatC) CUN60_04430 PF02416 mttA/Hcf106 family CUN60_04435 PF02416 mttA/Hcf106 family CUN60_04460 PF00664 ABC transporter transmembrane region CUN60_04460 PF00005 ABC transporter CUN60_04465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CUN60_04470 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_04475 PF00227 Proteasome subunit CUN60_04480 PF03129 Anticodon binding domain CUN60_04480 PF02824 TGS domain CUN60_04480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUN60_04480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CUN60_04490 PF03275 UDP-galactopyranose mutase CUN60_04495 PF16363 GDP-mannose 4,6 dehydratase CUN60_04500 PF01370 NAD dependent epimerase/dehydratase family CUN60_04515 PF00535 Glycosyl transferase family 2 CUN60_04525 PF01531 Glycosyl transferase family 11 CUN60_04530 PF00535 Glycosyl transferase family 2 CUN60_04540 PF00534 Glycosyl transferases group 1 CUN60_04540 PF13439 Glycosyltransferase Family 4 CUN60_04555 PF02397 Bacterial sugar transferase CUN60_04560 PF00854 POT family CUN60_04565 PF01061 ABC-2 type transporter CUN60_04570 PF00005 ABC transporter CUN60_04580 PF01467 Cytidylyltransferase-like CUN60_04585 PF14307 Glycosyltransferase WbsX CUN60_04585 PF05045 Rhamnan synthesis protein F CUN60_04595 PF01501 Glycosyl transferase family 8 CUN60_04595 PF00535 Glycosyl transferase family 2 CUN60_04610 PF13439 Glycosyltransferase Family 4 CUN60_04610 PF00534 Glycosyl transferases group 1 CUN60_04615 PF02397 Bacterial sugar transferase CUN60_04620 PF00707 Translation initiation factor IF-3, C-terminal domain CUN60_04620 PF05198 Translation initiation factor IF-3, N-terminal domain CUN60_04655 PF01040 UbiA prenyltransferase family CUN60_04660 PF04030 D-arabinono-1,4-lactone oxidase CUN60_04660 PF01565 FAD binding domain CUN60_04690 PF00535 Glycosyl transferase family 2 CUN60_04700 PF01632 Ribosomal protein L35 CUN60_04705 PF00453 Ribosomal protein L20 CUN60_04715 PF01409 tRNA synthetases class II core domain (F) CUN60_04715 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CUN60_04720 PF03147 Ferredoxin-fold anticodon binding domain CUN60_04720 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CUN60_04720 PF01588 Putative tRNA binding domain CUN60_04720 PF03484 tRNA synthetase B5 domain CUN60_04720 PF03483 B3/4 domain CUN60_04725 PF00216 Bacterial DNA-binding protein CUN60_04730 PF01654 Cytochrome bd terminal oxidase subunit I CUN60_04735 PF02322 Cytochrome bd terminal oxidase subunit II CUN60_04745 PF01515 Phosphate acetyl/butaryl transferase CUN60_04750 PF01523 Putative modulator of DNA gyrase CUN60_04760 PF03372 Endonuclease/Exonuclease/phosphatase family CUN60_04770 PF03775 Septum formation inhibitor MinC, C-terminal domain CUN60_04770 PF05209 Septum formation inhibitor MinC, N-terminal domain CUN60_04775 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CUN60_04780 PF03776 Septum formation topological specificity factor MinE CUN60_04785 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_04805 PF00082 Subtilase family CUN60_04805 PF04151 Bacterial pre-peptidase C-terminal domain CUN60_04825 PF03466 LysR substrate binding domain CUN60_04825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_04830 PF00437 Type II/IV secretion system protein CUN60_04835 PF00437 Type II/IV secretion system protein CUN60_04840 PF01189 16S rRNA methyltransferase RsmB/F CUN60_04840 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CUN60_04840 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF CUN60_04855 PF00733 Asparagine synthase CUN60_04855 PF13537 Glutamine amidotransferase domain CUN60_04860 PF00403 Heavy-metal-associated domain CUN60_04890 PF02153 Prephenate dehydrogenase CUN60_04890 PF01817 Chorismate mutase type II CUN60_04895 PF01272 Transcription elongation factor, GreA/GreB, C-term CUN60_04895 PF03449 Transcription elongation factor, N-terminal CUN60_04900 PF10609 NUBPL iron-transfer P-loop NTPase CUN60_04905 PF08264 Anticodon-binding domain of tRNA CUN60_04905 PF09334 tRNA synthetases class I (M) CUN60_04905 PF01588 Putative tRNA binding domain CUN60_04920 PF00929 Exonuclease CUN60_04925 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CUN60_04930 PF02542 YgbB family CUN60_04935 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CUN60_04940 PF02541 Ppx/GppA phosphatase family CUN60_04945 PF00501 AMP-binding enzyme CUN60_04945 PF16177 Acetyl-coenzyme A synthetase N-terminus CUN60_04945 PF13193 AMP-binding enzyme C-terminal domain CUN60_04950 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CUN60_04950 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CUN60_04955 PF07690 Major Facilitator Superfamily CUN60_04965 PF00005 ABC transporter CUN60_04970 PF01032 FecCD transport family CUN60_04975 PF01032 FecCD transport family CUN60_04980 PF01497 Periplasmic binding protein CUN60_04985 PF00501 AMP-binding enzyme CUN60_04985 PF00501 AMP-binding enzyme CUN60_04985 PF13193 AMP-binding enzyme C-terminal domain CUN60_04985 PF00668 Condensation domain CUN60_04985 PF00550 Phosphopantetheine attachment site CUN60_04985 PF13193 AMP-binding enzyme C-terminal domain CUN60_04985 PF00668 Condensation domain CUN60_04985 PF00550 Phosphopantetheine attachment site CUN60_04990 PF16653 Saccharopine dehydrogenase C-terminal domain CUN60_04990 PF03435 Saccharopine dehydrogenase NADP binding domain CUN60_04995 PF00171 Aldehyde dehydrogenase family CUN60_05005 PF00708 Acylphosphatase CUN60_05005 PF01300 Telomere recombination CUN60_05005 PF17788 HypF Kae1-like domain CUN60_05005 PF07503 HypF finger CUN60_05010 PF02492 CobW/HypB/UreG, nucleotide-binding domain CUN60_05025 PF02631 RecX family CUN60_05030 PF00154 recA bacterial DNA recombination protein CUN60_05050 PF01078 Magnesium chelatase, subunit ChlI CUN60_05050 PF13335 Magnesium chelatase, subunit ChlI C-terminal CUN60_05055 PF04380 Membrane fusogenic activity CUN60_05060 PF01165 Ribosomal protein S21 CUN60_05065 PF13520 Amino acid permease CUN60_05070 PF03129 Anticodon binding domain CUN60_05070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUN60_05070 PF04073 Aminoacyl-tRNA editing domain CUN60_05075 PF01464 Transglycosylase SLT domain CUN60_05085 PF00106 short chain dehydrogenase CUN60_05095 PF00977 Histidine biosynthesis protein CUN60_05100 PF00117 Glutamine amidotransferase class-I CUN60_05140 PF04632 Fusaric acid resistance protein family CUN60_05145 PF01565 FAD binding domain CUN60_05145 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CUN60_05160 PF00271 Helicase conserved C-terminal domain CUN60_05160 PF04851 Type III restriction enzyme, res subunit CUN60_05160 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CUN60_05160 PF08463 EcoEI R protein C-terminal CUN60_05185 PF02779 Transketolase, pyrimidine binding domain CUN60_05185 PF02780 Transketolase, C-terminal domain CUN60_05190 PF01051 Initiator Replication protein CUN60_05200 PF00005 ABC transporter CUN60_05210 PF00324 Amino acid permease CUN60_05215 PF00728 Glycosyl hydrolase family 20, catalytic domain CUN60_05215 PF02838 Glycosyl hydrolase family 20, domain 2 CUN60_05220 PF07690 Major Facilitator Superfamily CUN60_05225 PF00149 Calcineurin-like phosphoesterase CUN60_05225 PF02872 5'-nucleotidase, C-terminal domain CUN60_05230 PF01593 Flavin containing amine oxidoreductase CUN60_05235 PF00924 Mechanosensitive ion channel CUN60_05245 PF00375 Sodium:dicarboxylate symporter family CUN60_05250 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CUN60_05250 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CUN60_05260 PF00294 pfkB family carbohydrate kinase CUN60_05265 PF00334 Nucleoside diphosphate kinase CUN60_05270 PF04055 Radical SAM superfamily CUN60_05275 PF01476 LysM domain CUN60_05275 PF00877 NlpC/P60 family CUN60_05280 PF04551 GcpE protein CUN60_05285 PF03129 Anticodon binding domain CUN60_05285 PF13393 Histidyl-tRNA synthetase CUN60_05295 PF13360 PQQ-like domain CUN60_05300 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CUN60_05300 PF01926 50S ribosome-binding GTPase CUN60_05305 PF17209 Hfq protein CUN60_05310 PF13167 GTP-binding GTPase N-terminal CUN60_05310 PF16360 GTP-binding GTPase Middle Region CUN60_05310 PF01926 50S ribosome-binding GTPase CUN60_05325 PF00342 Phosphoglucose isomerase CUN60_05335 PF01116 Fructose-bisphosphate aldolase class-II CUN60_05340 PF07690 Major Facilitator Superfamily CUN60_05340 PF00083 Sugar (and other) transporter CUN60_05355 PF08331 Domain of unknown function (DUF1730) CUN60_05360 PF02515 CoA-transferase family III CUN60_05365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUN60_05365 PF02770 Acyl-CoA dehydrogenase, middle domain CUN60_05365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUN60_05370 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CUN60_05375 PF01520 N-acetylmuramoyl-L-alanine amidase CUN60_05375 PF11741 AMIN domain CUN60_05380 PF00849 RNA pseudouridylate synthase CUN60_05390 PF05681 Fumarate hydratase (Fumerase) CUN60_05390 PF05683 Fumarase C-terminus CUN60_05395 PF17848 Acetyl-coA carboxylase zinc finger domain CUN60_05395 PF01039 Carboxyl transferase domain CUN60_05400 PF01048 Phosphorylase superfamily CUN60_05405 PF02774 Semialdehyde dehydrogenase, dimerisation domain CUN60_05405 PF01118 Semialdehyde dehydrogenase, NAD binding domain CUN60_05415 PF01416 tRNA pseudouridine synthase CUN60_05425 PF00690 Cation transporter/ATPase, N-terminus CUN60_05425 PF00689 Cation transporting ATPase, C-terminus CUN60_05450 PF02130 Uncharacterized protein family UPF0054 CUN60_05455 PF03471 Transporter associated domain CUN60_05455 PF00571 CBS domain CUN60_05460 PF00795 Carbon-nitrogen hydrolase CUN60_05470 PF00795 Carbon-nitrogen hydrolase CUN60_05490 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CUN60_05490 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CUN60_05495 PF01263 Aldose 1-epimerase CUN60_05500 PF08544 GHMP kinases C terminal CUN60_05500 PF00288 GHMP kinases N terminal domain CUN60_05500 PF10509 Galactokinase galactose-binding signature CUN60_05505 PF00012 Hsp70 protein CUN60_05510 PF01025 GrpE CUN60_05515 PF07690 Major Facilitator Superfamily CUN60_05545 PF13333 Integrase core domain CUN60_05545 PF00665 Integrase core domain CUN60_05545 PF13276 HTH-like domain CUN60_05595 PF00881 Nitroreductase family CUN60_05605 PF00561 alpha/beta hydrolase fold CUN60_05610 PF00468 Ribosomal protein L34 CUN60_05615 PF00825 Ribonuclease P CUN60_05620 PF01809 Putative membrane protein insertion efficiency factor CUN60_05625 PF02096 60Kd inner membrane protein CUN60_05625 PF14849 YidC periplasmic domain CUN60_05630 PF00080 Copper/zinc superoxide dismutase (SODC) CUN60_05640 PF00144 Beta-lactamase CUN60_05655 PF07690 Major Facilitator Superfamily CUN60_05660 PF13533 Biotin-lipoyl like CUN60_05665 PF02321 Outer membrane efflux protein CUN60_05670 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CUN60_05675 PF01914 MarC family integral membrane protein CUN60_05775 PF00114 Pilin (bacterial filament) CUN60_05775 PF07963 Prokaryotic N-terminal methylation motif CUN60_05780 PF00216 Bacterial DNA-binding protein CUN60_05785 PF01016 Ribosomal L27 protein CUN60_05790 PF00829 Ribosomal prokaryotic L21 protein CUN60_05795 PF13180 PDZ domain CUN60_05805 PF00730 HhH-GPD superfamily base excision DNA repair protein CUN60_05805 PF00633 Helix-hairpin-helix motif CUN60_05805 PF10576 Iron-sulfur binding domain of endonuclease III CUN60_05810 PF03796 DnaB-like helicase C terminal domain CUN60_05810 PF00772 DnaB-like helicase N terminal domain CUN60_05815 PF00999 Sodium/hydrogen exchanger family CUN60_05820 PF00578 AhpC/TSA family CUN60_05835 PF02789 Cytosol aminopeptidase family, N-terminal domain CUN60_05835 PF00883 Cytosol aminopeptidase family, catalytic domain CUN60_05855 PF00881 Nitroreductase family CUN60_05875 PF00929 Exonuclease CUN60_05880 PF02578 Multi-copper polyphenol oxidoreductase laccase CUN60_05885 PF00849 RNA pseudouridylate synthase CUN60_05885 PF01479 S4 domain CUN60_05890 PF13525 Outer membrane lipoprotein CUN60_05900 PF00574 Clp protease CUN60_05910 PF07724 AAA domain (Cdc48 subfamily) CUN60_05910 PF10431 C-terminal, D2-small domain, of ClpB protein CUN60_05910 PF06689 ClpX C4-type zinc finger CUN60_05935 PF03631 Virulence factor BrkB CUN60_05940 PF00854 POT family CUN60_05955 PF00289 Biotin carboxylase, N-terminal domain CUN60_05955 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUN60_05955 PF02785 Biotin carboxylase C-terminal domain CUN60_05960 PF00364 Biotin-requiring enzyme CUN60_05965 PF01220 Dehydroquinase class II CUN60_05975 PF00550 Phosphopantetheine attachment site CUN60_05980 PF17864 RuvB AAA lid domain CUN60_05980 PF05491 RuvB C-terminal winged helix domain CUN60_05980 PF05496 Holliday junction DNA helicase RuvB P-loop domain CUN60_05990 PF00534 Glycosyl transferases group 1 CUN60_05990 PF08323 Starch synthase catalytic domain CUN60_05995 PF00483 Nucleotidyl transferase CUN60_06000 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUN60_06000 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUN60_06000 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUN60_06000 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUN60_06020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUN60_06025 PF00171 Aldehyde dehydrogenase family CUN60_06035 PF00155 Aminotransferase class I and II CUN60_06070 PF00230 Major intrinsic protein CUN60_06085 PF07690 Major Facilitator Superfamily CUN60_06090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUN60_06090 PF00529 HlyD membrane-fusion protein of T1SS CUN60_06095 PF02321 Outer membrane efflux protein CUN60_06125 PF00535 Glycosyl transferase family 2 CUN60_06135 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CUN60_06140 PF11898 Domain of unknown function (DUF3418) CUN60_06140 PF00271 Helicase conserved C-terminal domain CUN60_06140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CUN60_06140 PF00270 DEAD/DEAH box helicase CUN60_06140 PF04408 Helicase associated domain (HA2) CUN60_06145 PF02575 YbaB/EbfC DNA-binding family CUN60_06150 PF12169 DNA polymerase III subunits gamma and tau domain III CUN60_06150 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CUN60_06150 PF12170 DNA polymerase III tau subunit V interacting with alpha CUN60_06155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_06160 PF00899 ThiF family CUN60_06170 PF01488 Shikimate / quinate 5-dehydrogenase CUN60_06170 PF08501 Shikimate dehydrogenase substrate binding domain CUN60_06170 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CUN60_06190 PF07690 Major Facilitator Superfamily CUN60_06195 PF01872 RibD C-terminal domain CUN60_06205 PF14814 Bifunctional transglycosylase second domain CUN60_06205 PF00905 Penicillin binding protein transpeptidase domain CUN60_06205 PF00912 Transglycosylase CUN60_06235 PF01842 ACT domain CUN60_06235 PF00551 Formyl transferase CUN60_06240 PF00343 Carbohydrate phosphorylase CUN60_06245 PF02446 4-alpha-glucanotransferase CUN60_06250 PF03606 C4-dicarboxylate anaerobic carrier CUN60_06260 PF03462 PCRF domain CUN60_06260 PF00472 RF-1 domain CUN60_06265 PF00324 Amino acid permease CUN60_06270 PF03358 NADPH-dependent FMN reductase CUN60_06295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CUN60_06340 PF04204 Homoserine O-succinyltransferase CUN60_06355 PF00106 short chain dehydrogenase CUN60_06365 PF01055 Glycosyl hydrolases family 31 CUN60_06365 PF17137 Domain of unknown function (DUF5110) CUN60_06365 PF13802 Galactose mutarotase-like CUN60_06365 PF16338 Domain of unknown function (DUF4968) CUN60_06370 PF00005 ABC transporter CUN60_06370 PF08402 TOBE domain CUN60_06375 PF00528 Binding-protein-dependent transport system inner membrane component CUN60_06380 PF00528 Binding-protein-dependent transport system inner membrane component CUN60_06390 PF13416 Bacterial extracellular solute-binding protein CUN60_06400 PF03631 Virulence factor BrkB CUN60_06405 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CUN60_06405 PF02843 Phosphoribosylglycinamide synthetase, C domain CUN60_06405 PF02844 Phosphoribosylglycinamide synthetase, N domain CUN60_06410 PF03976 Polyphosphate kinase 2 (PPK2) CUN60_06430 PF02938 GAD domain CUN60_06430 PF00152 tRNA synthetases class II (D, K and N) CUN60_06430 PF01336 OB-fold nucleic acid binding domain CUN60_06435 PF08328 Adenylosuccinate lyase C-terminal CUN60_06435 PF00206 Lyase CUN60_06445 PF00436 Single-strand binding protein family CUN60_06455 PF02403 Seryl-tRNA synthetase N-terminal domain CUN60_06455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CUN60_06470 PF12833 Helix-turn-helix domain CUN60_06470 PF02805 Metal binding domain of Ada CUN60_06470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CUN60_06470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CUN60_06475 PF00226 DnaJ domain CUN60_06475 PF01556 DnaJ C terminal domain CUN60_06475 PF00684 DnaJ central domain CUN60_06480 PF07690 Major Facilitator Superfamily CUN60_06485 PF07690 Major Facilitator Superfamily CUN60_06490 PF01906 Putative heavy-metal-binding CUN60_06500 PF00588 SpoU rRNA Methylase family CUN60_06500 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUN60_06505 PF00579 tRNA synthetases class I (W and Y) CUN60_06505 PF01479 S4 domain CUN60_06530 PF14403 Circularly permuted ATP-grasp type 2 CUN60_06540 PF07690 Major Facilitator Superfamily CUN60_06545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUN60_06545 PF00529 HlyD membrane-fusion protein of T1SS CUN60_06555 PF01266 FAD dependent oxidoreductase CUN60_06555 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CUN60_06560 PF00075 RNase H CUN60_06575 PF02245 Methylpurine-DNA glycosylase (MPG) CUN60_06580 PF18073 Rubredoxin metal binding domain CUN60_06585 PF06472 ABC transporter transmembrane region 2 CUN60_06585 PF00005 ABC transporter CUN60_06590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CUN60_06595 PF00436 Single-strand binding protein family CUN60_06605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_06605 PF03466 LysR substrate binding domain CUN60_06625 PF02472 Biopolymer transport protein ExbD/TolR CUN60_06635 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CUN60_06640 PF06276 Ferric iron reductase FhuF-like transporter CUN60_06640 PF04183 IucA / IucC family CUN60_06645 PF06276 Ferric iron reductase FhuF-like transporter CUN60_06645 PF04183 IucA / IucC family CUN60_06655 PF07690 Major Facilitator Superfamily CUN60_06660 PF13416 Bacterial extracellular solute-binding protein CUN60_06690 PF16957 Malonate decarboxylase, alpha subunit, transporter CUN60_06695 PF01039 Carboxyl transferase domain CUN60_06700 PF01039 Carboxyl transferase domain CUN60_06710 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CUN60_06720 PF03577 Peptidase family C69 CUN60_06725 PF13520 Amino acid permease CUN60_06735 PF00491 Arginase family CUN60_06740 PF13520 Amino acid permease CUN60_06750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CUN60_06750 PF17810 Arginine decarboxylase helical bundle domain CUN60_06750 PF17944 Arginine decarboxylase C-terminal helical extension CUN60_06755 PF01053 Cys/Met metabolism PLP-dependent enzyme CUN60_06770 PF00448 SRP54-type protein, GTPase domain CUN60_06770 PF02881 SRP54-type protein, helical bundle domain CUN60_06775 PF00268 Ribonucleotide reductase, small chain CUN60_06790 PF00216 Bacterial DNA-binding protein CUN60_06800 PF02899 Phage integrase, N-terminal SAM-like domain CUN60_06800 PF00589 Phage integrase family CUN60_06840 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CUN60_06845 PF00403 Heavy-metal-associated domain CUN60_06855 PF00873 AcrB/AcrD/AcrF family CUN60_06880 PF02796 Helix-turn-helix domain of resolvase CUN60_06880 PF00239 Resolvase, N terminal domain CUN60_06885 PF13700 Domain of unknown function (DUF4158) CUN60_06885 PF01526 Tn3 transposase DDE domain CUN60_06900 PF05175 Methyltransferase small domain CUN60_06900 PF17827 PrmC N-terminal domain CUN60_06910 PF03831 PhnA domain CUN60_06910 PF08274 PhnA Zinc-Ribbon CUN60_06915 PF00216 Bacterial DNA-binding protein CUN60_06930 PF00535 Glycosyl transferase family 2 CUN60_06975 PF12477 Sex factor F TraW protein N terminal CUN60_07110 PF00239 Resolvase, N terminal domain CUN60_07110 PF02796 Helix-turn-helix domain of resolvase CUN60_07120 PF02796 Helix-turn-helix domain of resolvase CUN60_07120 PF00239 Resolvase, N terminal domain CUN60_07125 PF02583 Metal-sensitive transcriptional repressor CUN60_07140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUN60_07145 PF00873 AcrB/AcrD/AcrF family CUN60_07150 PF02321 Outer membrane efflux protein CUN60_07185 PF07916 TraG-like protein, N-terminal region CUN60_07210 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CUN60_07240 PF05309 TraE protein CUN60_07285 PF01264 Chorismate synthase CUN60_07290 PF00155 Aminotransferase class I and II CUN60_07295 PF01817 Chorismate mutase type II CUN60_07295 PF00800 Prephenate dehydratase CUN60_07305 PF00793 DAHP synthetase I family CUN60_07310 PF00793 DAHP synthetase I family CUN60_07315 PF01761 3-dehydroquinate synthase CUN60_07320 PF03786 D-mannonate dehydratase (UxuA) CUN60_07335 PF01430 Hsp33 protein CUN60_07340 PF01709 Transcriptional regulator CUN60_07350 PF02548 Ketopantoate hydroxymethyltransferase CUN60_07355 PF02569 Pantoate-beta-alanine ligase CUN60_07360 PF02441 Flavoprotein CUN60_07360 PF04127 DNA / pantothenate metabolism flavoprotein CUN60_07365 PF03309 Type III pantothenate kinase CUN60_07380 PF00293 NUDIX domain CUN60_07385 PF03772 Competence protein CUN60_07385 PF00753 Metallo-beta-lactamase superfamily CUN60_07390 PF01925 Sulfite exporter TauE/SafE CUN60_07395 PF07690 Major Facilitator Superfamily CUN60_07420 PF01321 Creatinase/Prolidase N-terminal domain CUN60_07420 PF00557 Metallopeptidase family M24 CUN60_07425 PF01914 MarC family integral membrane protein CUN60_07430 PF00834 Ribulose-phosphate 3 epimerase family CUN60_07440 PF03572 Peptidase family S41 CUN60_07440 PF13180 PDZ domain CUN60_07445 PF05524 PEP-utilising enzyme, N-terminal CUN60_07445 PF02896 PEP-utilising enzyme, TIM barrel domain CUN60_07445 PF00391 PEP-utilising enzyme, mobile domain CUN60_07450 PF00381 PTS HPr component phosphorylation site CUN60_07460 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CUN60_07460 PF00367 phosphotransferase system, EIIB CUN60_07460 PF02378 Phosphotransferase system, EIIC CUN60_07465 PF00381 PTS HPr component phosphorylation site CUN60_07465 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CUN60_07465 PF05524 PEP-utilising enzyme, N-terminal CUN60_07465 PF00391 PEP-utilising enzyme, mobile domain CUN60_07465 PF02896 PEP-utilising enzyme, TIM barrel domain CUN60_07470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CUN60_07470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CUN60_07500 PF01207 Dihydrouridine synthase (Dus) CUN60_07505 PF02913 FAD linked oxidases, C-terminal domain CUN60_07505 PF01565 FAD binding domain CUN60_07515 PF01618 MotA/TolQ/ExbB proton channel family CUN60_07525 PF03364 Polyketide cyclase / dehydrase and lipid transport CUN60_07530 PF03658 RnfH family Ubiquitin CUN60_07535 PF00768 D-alanyl-D-alanine carboxypeptidase CUN60_07550 PF00953 Glycosyl transferase family 4 CUN60_07555 PF07963 Prokaryotic N-terminal methylation motif CUN60_07555 PF00114 Pilin (bacterial filament) CUN60_07570 PF07963 Prokaryotic N-terminal methylation motif CUN60_07570 PF00114 Pilin (bacterial filament) CUN60_07595 PF08241 Methyltransferase domain CUN60_07600 PF00535 Glycosyl transferase family 2 CUN60_07610 PF00535 Glycosyl transferase family 2 CUN60_07615 PF07650 KH domain CUN60_07615 PF01926 50S ribosome-binding GTPase CUN60_07620 PF14622 Ribonuclease-III-like CUN60_07620 PF00035 Double-stranded RNA binding motif CUN60_07625 PF10502 Signal peptidase, peptidase S26 CUN60_07630 PF00814 Glycoprotease family CUN60_07655 PF13443 Cro/C1-type HTH DNA-binding domain CUN60_07665 PF01648 4'-phosphopantetheinyl transferase superfamily CUN60_07670 PF05088 Bacterial NAD-glutamate dehydrogenase CUN60_07675 PF00490 Delta-aminolevulinic acid dehydratase CUN60_07680 PF00156 Phosphoribosyl transferase domain CUN60_07685 PF01081 KDPG and KHG aldolase CUN60_07690 PF01081 KDPG and KHG aldolase CUN60_07695 PF00920 Dehydratase family CUN60_07700 PF07690 Major Facilitator Superfamily CUN60_07715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CUN60_07740 PF01225 Mur ligase family, catalytic domain CUN60_07740 PF08245 Mur ligase middle domain CUN60_07740 PF02875 Mur ligase family, glutamate ligase domain CUN60_07745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CUN60_07745 PF02875 Mur ligase family, glutamate ligase domain CUN60_07745 PF08245 Mur ligase middle domain CUN60_07750 PF02601 Exonuclease VII, large subunit CUN60_07750 PF13742 OB-fold nucleic acid binding domain CUN60_07760 PF00375 Sodium:dicarboxylate symporter family CUN60_07790 PF03485 Arginyl tRNA synthetase N terminal domain CUN60_07790 PF05746 DALR anticodon binding domain CUN60_07790 PF00750 tRNA synthetases class I (R) CUN60_07795 PF00043 Glutathione S-transferase, C-terminal domain CUN60_07795 PF02798 Glutathione S-transferase, N-terminal domain CUN60_07800 PF04386 Stringent starvation protein B CUN60_07805 PF01206 Sulfurtransferase TusA CUN60_07810 PF00152 tRNA synthetases class II (D, K and N) CUN60_07810 PF01336 OB-fold nucleic acid binding domain CUN60_07815 PF00083 Sugar (and other) transporter CUN60_07820 PF00728 Glycosyl hydrolase family 20, catalytic domain CUN60_07820 PF02838 Glycosyl hydrolase family 20, domain 2 CUN60_07825 PF07687 Peptidase dimerisation domain CUN60_07825 PF01546 Peptidase family M20/M25/M40 CUN60_07840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CUN60_07845 PF00438 S-adenosylmethionine synthetase, N-terminal domain CUN60_07845 PF02772 S-adenosylmethionine synthetase, central domain CUN60_07845 PF02773 S-adenosylmethionine synthetase, C-terminal domain CUN60_07855 PF00186 Dihydrofolate reductase CUN60_07860 PF00303 Thymidylate synthase CUN60_07865 PF00293 NUDIX domain CUN60_07875 PF00037 4Fe-4S binding domain CUN60_07890 PF06733 DEAD_2 CUN60_07890 PF13307 Helicase C-terminal domain CUN60_07900 PF00270 DEAD/DEAH box helicase CUN60_07900 PF00271 Helicase conserved C-terminal domain CUN60_07905 PF00885 6,7-dimethyl-8-ribityllumazine synthase CUN60_07910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CUN60_07910 PF00925 GTP cyclohydrolase II CUN60_07915 PF00677 Lumazine binding domain CUN60_07920 PF00083 Sugar (and other) transporter CUN60_07925 PF00083 Sugar (and other) transporter CUN60_07930 PF03702 Anhydro-N-acetylmuramic acid kinase CUN60_07935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CUN60_07935 PF01872 RibD C-terminal domain CUN60_07945 PF08245 Mur ligase middle domain CUN60_07945 PF02875 Mur ligase family, glutamate ligase domain CUN60_07950 PF01227 GTP cyclohydrolase I CUN60_07955 PF00117 Glutamine amidotransferase class-I CUN60_07960 PF00425 chorismate binding enzyme CUN60_07960 PF04715 Anthranilate synthase component I, N terminal region CUN60_07990 PF00183 Hsp90 protein CUN60_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_07995 PF01545 Cation efflux family CUN60_08000 PF00111 2Fe-2S iron-sulfur cluster binding domain CUN60_08010 PF01053 Cys/Met metabolism PLP-dependent enzyme CUN60_08015 PF00291 Pyridoxal-phosphate dependent enzyme CUN60_08025 PF04461 Protein of unknown function (DUF520) CUN60_08030 PF00005 ABC transporter CUN60_08030 PF09383 NIL domain CUN60_08035 PF00528 Binding-protein-dependent transport system inner membrane component CUN60_08040 PF03180 NLPA lipoprotein CUN60_08045 PF07499 RuvA, C-terminal domain CUN60_08045 PF01330 RuvA N terminal domain CUN60_08050 PF00230 Major intrinsic protein CUN60_08055 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CUN60_08055 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CUN60_08070 PF00795 Carbon-nitrogen hydrolase CUN60_08070 PF00535 Glycosyl transferase family 2 CUN60_08085 PF13419 Haloacid dehalogenase-like hydrolase CUN60_08105 PF01266 FAD dependent oxidoreductase CUN60_08115 PF00375 Sodium:dicarboxylate symporter family CUN60_08120 PF00005 ABC transporter CUN60_08120 PF00664 ABC transporter transmembrane region CUN60_08125 PF01062 Bestrophin, RFP-TM, chloride channel CUN60_08130 PF00012 Hsp70 protein CUN60_08135 PF00226 DnaJ domain CUN60_08135 PF07743 HSCB C-terminal oligomerisation domain CUN60_08140 PF01521 Iron-sulphur cluster biosynthesis CUN60_08145 PF01592 NifU-like N terminal domain CUN60_08150 PF00266 Aminotransferase class-V CUN60_08155 PF02082 Transcriptional regulator CUN60_08160 PF01063 Amino-transferase class IV CUN60_08165 PF01063 Amino-transferase class IV CUN60_08205 PF01063 Amino-transferase class IV CUN60_08210 PF00330 Aconitase family (aconitate hydratase) CUN60_08215 PF00694 Aconitase C-terminal domain CUN60_08220 PF00180 Isocitrate/isopropylmalate dehydrogenase CUN60_08225 PF00682 HMGL-like CUN60_08225 PF08502 LeuA allosteric (dimerisation) domain CUN60_08230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUN60_08230 PF00205 Thiamine pyrophosphate enzyme, central domain CUN60_08230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUN60_08235 PF10369 Small subunit of acetolactate synthase CUN60_08240 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CUN60_08240 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CUN60_08250 PF01197 Ribosomal protein L31 CUN60_08255 PF03023 Lipid II flippase MurJ CUN60_08265 PF00654 Voltage gated chloride channel CUN60_08270 PF02075 Crossover junction endodeoxyribonuclease RuvC CUN60_08275 PF12795 Mechanosensitive ion channel porin domain CUN60_08275 PF12794 Mechanosensitive ion channel inner membrane domain 1 CUN60_08275 PF00924 Mechanosensitive ion channel CUN60_08285 PF00083 Sugar (and other) transporter CUN60_08285 PF08946 Osmosensory transporter coiled coil CUN60_08295 PF00390 Malic enzyme, N-terminal domain CUN60_08295 PF03949 Malic enzyme, NAD binding domain CUN60_08295 PF01515 Phosphate acetyl/butaryl transferase CUN60_08305 PF01292 Prokaryotic cytochrome b561 CUN60_08315 PF13684 Dihydroxyacetone kinase family CUN60_08315 PF02734 DAK2 domain CUN60_08325 PF02861 Clp amino terminal domain, pathogenicity island component CUN60_08325 PF17871 AAA lid domain CUN60_08325 PF10431 C-terminal, D2-small domain, of ClpB protein CUN60_08325 PF07724 AAA domain (Cdc48 subfamily) CUN60_08325 PF00004 ATPase family associated with various cellular activities (AAA) CUN60_08330 PF05724 Thiopurine S-methyltransferase (TPMT) CUN60_08335 PF02595 Glycerate kinase family CUN60_08355 PF02082 Transcriptional regulator CUN60_08360 PF07690 Major Facilitator Superfamily CUN60_08375 PF13276 HTH-like domain CUN60_08375 PF00665 Integrase core domain CUN60_08375 PF13333 Integrase core domain CUN60_08385 PF00113 Enolase, C-terminal TIM barrel domain CUN60_08385 PF03952 Enolase, N-terminal domain CUN60_08395 PF00793 DAHP synthetase I family CUN60_08400 PF00117 Glutamine amidotransferase class-I CUN60_08400 PF06418 CTP synthase N-terminus CUN60_08410 PF00005 ABC transporter CUN60_08415 PF01471 Putative peptidoglycan binding domain CUN60_08415 PF03734 L,D-transpeptidase catalytic domain CUN60_08420 PF00291 Pyridoxal-phosphate dependent enzyme CUN60_08425 PF00920 Dehydratase family CUN60_08470 PF03934 Type II secretion system (T2SS), protein K CUN60_08475 PF11612 Type II secretion system (T2SS), protein J CUN60_08475 PF07963 Prokaryotic N-terminal methylation motif CUN60_08490 PF08334 Type II secretion system (T2SS), protein G CUN60_08490 PF07963 Prokaryotic N-terminal methylation motif CUN60_08495 PF02910 Fumarate reductase flavoprotein C-term CUN60_08495 PF00890 FAD binding domain CUN60_08500 PF01113 Dihydrodipicolinate reductase, N-terminus CUN60_08500 PF05173 Dihydrodipicolinate reductase, C-terminus CUN60_08505 PF04355 SmpA / OmlA family CUN60_08510 PF01475 Ferric uptake regulator family CUN60_08520 PF00263 Bacterial type II and III secretion system protein CUN60_08520 PF03958 Bacterial type II/III secretion system short domain CUN60_08525 PF00437 Type II/IV secretion system protein CUN60_08530 PF00482 Type II secretion system (T2SS), protein F CUN60_08535 PF00482 Type II secretion system (T2SS), protein F CUN60_08555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CUN60_08560 PF09115 DNA polymerase III, delta subunit, C terminal CUN60_08565 PF02223 Thymidylate kinase CUN60_08570 PF02618 YceG-like family CUN60_08575 PF00575 S1 RNA binding domain CUN60_08575 PF17876 Cold shock domain CUN60_08575 PF08461 Ribonuclease R winged-helix domain CUN60_08575 PF00773 RNB domain CUN60_08575 PF08206 Ribonuclease B OB domain CUN60_08580 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CUN60_08580 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CUN60_08590 PF00291 Pyridoxal-phosphate dependent enzyme CUN60_08600 PF01594 AI-2E family transporter CUN60_08605 PF02384 N-6 DNA Methylase CUN60_08615 PF01420 Type I restriction modification DNA specificity domain CUN60_08635 PF11867 Domain of unknown function (DUF3387) CUN60_08635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CUN60_08635 PF18766 SWI2/SNF2 ATPase CUN60_08645 PF07664 Ferrous iron transport protein B C terminus CUN60_08645 PF02421 Ferrous iron transport protein B CUN60_08645 PF07670 Nucleoside recognition CUN60_08655 PF07687 Peptidase dimerisation domain CUN60_08655 PF01546 Peptidase family M20/M25/M40 CUN60_08660 PF01743 Poly A polymerase head domain CUN60_08660 PF12626 Polymerase A arginine-rich C-terminus CUN60_08660 PF12627 Probable RNA and SrmB- binding site of polymerase A CUN60_08665 PF02390 Putative methyltransferase CUN60_08670 PF06969 HemN C-terminal domain CUN60_08670 PF04055 Radical SAM superfamily CUN60_08680 PF18152 DAHP synthase ferredoxin-like domain CUN60_08680 PF00793 DAHP synthetase I family CUN60_08685 PF00290 Tryptophan synthase alpha chain CUN60_08690 PF00291 Pyridoxal-phosphate dependent enzyme CUN60_08700 PF02885 Glycosyl transferase family, helical bundle domain CUN60_08700 PF00591 Glycosyl transferase family, a/b domain CUN60_08705 PF00117 Glutamine amidotransferase class-I CUN60_08705 PF02885 Glycosyl transferase family, helical bundle domain CUN60_08705 PF00591 Glycosyl transferase family, a/b domain CUN60_08710 PF04715 Anthranilate synthase component I, N terminal region CUN60_08710 PF00425 chorismate binding enzyme CUN60_08715 PF09285 Elongation factor P, C-terminal CUN60_08715 PF08207 Elongation factor P (EF-P) KOW-like domain CUN60_08715 PF01132 Elongation factor P (EF-P) OB domain CUN60_08730 PF00691 OmpA family CUN60_08735 PF00589 Phage integrase family CUN60_08735 PF02899 Phage integrase, N-terminal SAM-like domain CUN60_08740 PF03466 LysR substrate binding domain CUN60_08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_08775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CUN60_08780 PF00528 Binding-protein-dependent transport system inner membrane component CUN60_08785 PF00528 Binding-protein-dependent transport system inner membrane component CUN60_08785 PF12911 N-terminal TM domain of oligopeptide transport permease C CUN60_08790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUN60_08790 PF00005 ABC transporter CUN60_08795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CUN60_08795 PF00005 ABC transporter CUN60_08800 PF00709 Adenylosuccinate synthetase CUN60_08810 PF00588 SpoU rRNA Methylase family CUN60_08815 PF01177 Asp/Glu/Hydantoin racemase CUN60_08820 PF01026 TatD related DNase CUN60_08835 PF07075 Protein of unknown function (DUF1343) CUN60_08860 PF00795 Carbon-nitrogen hydrolase CUN60_08870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CUN60_08870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CUN60_08870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CUN60_08870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CUN60_08875 PF02163 Peptidase family M50 CUN60_08880 PF00579 tRNA synthetases class I (W and Y) CUN60_08885 PF00557 Metallopeptidase family M24 CUN60_08890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CUN60_08890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CUN60_08900 PF00311 Phosphoenolpyruvate carboxylase CUN60_08910 PF01207 Dihydrouridine synthase (Dus) CUN60_08925 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUN60_08930 PF01758 Sodium Bile acid symporter family CUN60_08935 PF01470 Pyroglutamyl peptidase CUN60_08950 PF01029 NusB family CUN60_08955 PF02423 Ornithine cyclodeaminase/mu-crystallin family CUN60_08960 PF00491 Arginase family CUN60_08965 PF00692 dUTPase CUN60_08975 PF07690 Major Facilitator Superfamily CUN60_08980 PF01580 FtsK/SpoIIIE family CUN60_08980 PF09397 Ftsk gamma domain CUN60_08980 PF17854 FtsK alpha domain CUN60_09000 PF03900 Porphobilinogen deaminase, C-terminal domain CUN60_09000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CUN60_09005 PF00588 SpoU rRNA Methylase family CUN60_09005 PF08032 RNA 2'-O ribose methyltransferase substrate binding CUN60_09010 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CUN60_09010 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CUN60_09015 PF00575 S1 RNA binding domain CUN60_09015 PF03725 3' exoribonuclease family, domain 2 CUN60_09015 PF01138 3' exoribonuclease family, domain 1 CUN60_09015 PF00013 KH domain CUN60_09015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CUN60_09020 PF00312 Ribosomal protein S15 CUN60_09030 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUN60_09040 PF01061 ABC-2 type transporter CUN60_09045 PF00005 ABC transporter CUN60_09050 PF04977 Septum formation initiator CUN60_09055 PF07690 Major Facilitator Superfamily CUN60_09060 PF07690 Major Facilitator Superfamily CUN60_09060 PF00083 Sugar (and other) transporter CUN60_09075 PF01676 Metalloenzyme superfamily CUN60_09080 PF01791 DeoC/LacD family aldolase CUN60_09090 PF17760 UvrA interaction domain CUN60_09090 PF17755 UvrA DNA-binding domain CUN60_09095 PF00133 tRNA synthetases class I (I, L, M and V) CUN60_09095 PF08264 Anticodon-binding domain of tRNA CUN60_09095 PF10458 Valyl tRNA synthetase tRNA binding arm CUN60_09100 PF03966 Trm112p-like protein CUN60_09105 PF02348 Cytidylyltransferase CUN60_09120 PF03313 Serine dehydratase alpha chain CUN60_09130 PF00117 Glutamine amidotransferase class-I CUN60_09130 PF13302 Acetyltransferase (GNAT) domain CUN60_09130 PF00958 GMP synthase C terminal domain CUN60_09130 PF13673 Acetyltransferase (GNAT) domain CUN60_09130 PF03352 Methyladenine glycosylase CUN60_09135 PF00005 ABC transporter CUN60_09135 PF12848 ABC transporter CUN60_09135 PF16326 ABC transporter C-terminal domain CUN60_09140 PF00462 Glutaredoxin CUN60_09145 PF03853 YjeF-related protein N-terminus CUN60_09145 PF01256 Carbohydrate kinase CUN60_09160 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_09170 PF03956 Lysine exporter LysO CUN60_09180 PF01557 Fumarylacetoacetate (FAA) hydrolase family CUN60_09185 PF07690 Major Facilitator Superfamily CUN60_09195 PF02441 Flavoprotein CUN60_09200 PF00365 Phosphofructokinase CUN60_09230 PF03466 LysR substrate binding domain CUN60_09230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_09240 PF01926 50S ribosome-binding GTPase CUN60_09240 PF01018 GTP1/OBG CUN60_09250 PF00665 Integrase core domain CUN60_09250 PF13276 HTH-like domain CUN60_09250 PF13333 Integrase core domain CUN60_09255 PF13580 SIS domain CUN60_09260 PF02021 Uncharacterised protein family UPF0102 CUN60_09270 PF04972 BON domain CUN60_09275 PF01435 Peptidase family M48 CUN60_09280 PF00551 Formyl transferase CUN60_09280 PF02911 Formyl transferase, C-terminal domain CUN60_09290 PF00588 SpoU rRNA Methylase family CUN60_09300 PF05175 Methyltransferase small domain CUN60_09305 PF00768 D-alanyl-D-alanine carboxypeptidase CUN60_09320 PF00326 Prolyl oligopeptidase family CUN60_09320 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CUN60_09345 PF01808 AICARFT/IMPCHase bienzyme CUN60_09345 PF02142 MGS-like domain CUN60_09350 PF01923 Cobalamin adenosyltransferase CUN60_09355 PF02222 ATP-grasp domain CUN60_09360 PF00551 Formyl transferase CUN60_09365 PF02769 AIR synthase related protein, C-terminal domain CUN60_09365 PF00586 AIR synthase related protein, N-terminal domain CUN60_09370 PF00156 Phosphoribosyl transferase domain CUN60_09375 PF01259 SAICAR synthetase CUN60_09380 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CUN60_09380 PF02769 AIR synthase related protein, C-terminal domain CUN60_09380 PF00586 AIR synthase related protein, N-terminal domain CUN60_09385 PF01455 HupF/HypC family CUN60_09390 PF01924 Hydrogenase formation hypA family CUN60_09395 PF00586 AIR synthase related protein, N-terminal domain CUN60_09395 PF02769 AIR synthase related protein, C-terminal domain CUN60_09400 PF07726 ATPase family associated with various cellular activities (AAA) CUN60_09400 PF17863 AAA lid domain CUN60_09415 PF07584 Aerotolerance regulator N-terminal CUN60_09415 PF00092 von Willebrand factor type A domain CUN60_09455 PF02719 Polysaccharide biosynthesis protein CUN60_09460 PF02397 Bacterial sugar transferase CUN60_09465 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CUN60_09485 PF10531 SLBB domain CUN60_09485 PF02563 Polysaccharide biosynthesis/export protein CUN60_09500 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CUN60_09505 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CUN60_09505 PF00809 Pterin binding enzyme CUN60_09510 PF01119 DNA mismatch repair protein, C-terminal domain CUN60_09510 PF08676 MutL C terminal dimerisation domain CUN60_09515 PF09335 SNARE associated Golgi protein CUN60_09525 PF07549 SecD/SecF GG Motif CUN60_09525 PF02355 Protein export membrane protein CUN60_09530 PF07549 SecD/SecF GG Motif CUN60_09530 PF13721 SecD export protein N-terminal TM region CUN60_09530 PF02355 Protein export membrane protein CUN60_09535 PF02699 Preprotein translocase subunit CUN60_09550 PF13276 HTH-like domain CUN60_09550 PF00665 Integrase core domain CUN60_09550 PF13333 Integrase core domain CUN60_09575 PF00155 Aminotransferase class I and II CUN60_09600 PF00815 Histidinol dehydrogenase CUN60_09610 PF13378 Enolase C-terminal domain-like CUN60_09610 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CUN60_09615 PF03061 Thioesterase superfamily CUN60_09620 PF11412 Disulphide bond corrector protein DsbC CUN60_09620 PF02683 Cytochrome C biogenesis protein transmembrane region CUN60_09625 PF07690 Major Facilitator Superfamily CUN60_09635 PF00216 Bacterial DNA-binding protein CUN60_09640 PF00575 S1 RNA binding domain CUN60_09645 PF02224 Cytidylate kinase CUN60_09650 PF01026 TatD related DNase CUN60_09655 PF00625 Guanylate kinase CUN60_09660 PF01192 RNA polymerase Rpb6 CUN60_09665 PF13291 ACT domain CUN60_09665 PF04607 Region found in RelA / SpoT proteins CUN60_09665 PF02824 TGS domain CUN60_09670 PF00004 ATPase family associated with various cellular activities (AAA) CUN60_09670 PF05362 Lon protease (S16) C-terminal proteolytic domain CUN60_09670 PF02190 ATP-dependent protease La (LON) substrate-binding domain CUN60_09675 PF17820 PDZ domain CUN60_09675 PF02163 Peptidase family M50 CUN60_09680 PF01103 Surface antigen CUN60_09680 PF07244 Surface antigen variable number repeat CUN60_09690 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_09690 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CUN60_09695 PF07977 FabA-like domain CUN60_09700 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CUN60_09700 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_09705 PF02684 Lipid-A-disaccharide synthetase CUN60_09710 PF01979 Amidohydrolase family CUN60_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_09730 PF03466 LysR substrate binding domain CUN60_09735 PF01351 Ribonuclease HII CUN60_09745 PF03180 NLPA lipoprotein CUN60_09750 PF00999 Sodium/hydrogen exchanger family CUN60_09785 PF02887 Pyruvate kinase, alpha/beta domain CUN60_09785 PF00224 Pyruvate kinase, barrel domain CUN60_09800 PF00005 ABC transporter CUN60_09825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUN60_09825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CUN60_09835 PF05698 Bacterial trigger factor protein (TF) C-terminus CUN60_09845 PF03477 ATP cone domain CUN60_09850 PF02091 Glycyl-tRNA synthetase alpha subunit CUN60_09855 PF01668 SmpB protein CUN60_09860 PF01765 Ribosome recycling factor CUN60_09865 PF01255 Putative undecaprenyl diphosphate synthase CUN60_09875 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CUN60_09875 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CUN60_09875 PF13288 DXP reductoisomerase C-terminal domain CUN60_09885 PF05191 Adenylate kinase, active site lid CUN60_09890 PF01435 Peptidase family M48 CUN60_09895 PF03193 RsgA GTPase CUN60_09915 PF12002 MgsA AAA+ ATPase C terminal CUN60_09915 PF16193 AAA C-terminal domain CUN60_09915 PF00004 ATPase family associated with various cellular activities (AAA) CUN60_09925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUN60_09925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUN60_09940 PF13520 Amino acid permease CUN60_09945 PF00916 Sulfate permease family CUN60_09945 PF01740 STAS domain CUN60_09960 PF00149 Calcineurin-like phosphoesterase CUN60_09975 PF01624 MutS domain I CUN60_09975 PF05188 MutS domain II CUN60_09975 PF05190 MutS family domain IV CUN60_09975 PF00488 MutS domain V CUN60_09975 PF05192 MutS domain III CUN60_09995 PF01467 Cytidylyltransferase-like CUN60_10000 PF03099 Biotin/lipoate A/B protein ligase family CUN60_10000 PF08279 HTH domain CUN60_10000 PF02237 Biotin protein ligase C terminal domain CUN60_10050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CUN60_10050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUN60_10060 PF02913 FAD linked oxidases, C-terminal domain CUN60_10060 PF01565 FAD binding domain CUN60_10060 PF13183 4Fe-4S dicluster domain CUN60_10075 PF02646 RmuC family CUN60_10090 PF00270 DEAD/DEAH box helicase CUN60_10090 PF00271 Helicase conserved C-terminal domain CUN60_10090 PF02559 CarD-like/TRCF domain CUN60_10090 PF17757 UvrB interaction domain CUN60_10090 PF03461 TRCF domain CUN60_10110 PF03180 NLPA lipoprotein CUN60_10125 PF00571 CBS domain CUN60_10125 PF03471 Transporter associated domain CUN60_10125 PF01595 Cyclin M transmembrane N-terminal domain CUN60_10130 PF03309 Type III pantothenate kinase CUN60_10135 PF00367 phosphotransferase system, EIIB CUN60_10135 PF02378 Phosphotransferase system, EIIC CUN60_10140 PF00144 Beta-lactamase CUN60_10145 PF02308 MgtC family CUN60_10150 PF00294 pfkB family carbohydrate kinase CUN60_10155 PF01212 Beta-eliminating lyase CUN60_10160 PF02667 Short chain fatty acid transporter CUN60_10175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CUN60_10185 PF03550 Outer membrane lipoprotein LolB CUN60_10195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CUN60_10195 PF06827 Zinc finger found in FPG and IleRS CUN60_10195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CUN60_10215 PF07885 Ion channel CUN60_10215 PF02254 TrkA-N domain CUN60_10220 PF17674 HHH domain CUN60_10220 PF00575 S1 RNA binding domain CUN60_10220 PF16921 Tex protein YqgF-like domain CUN60_10220 PF09371 Tex-like protein N-terminal domain CUN60_10225 PF00999 Sodium/hydrogen exchanger family CUN60_10225 PF02254 TrkA-N domain CUN60_10230 PF00753 Metallo-beta-lactamase superfamily CUN60_10230 PF12706 Beta-lactamase superfamily domain CUN60_10235 PF02743 Cache domain CUN60_10235 PF00211 Adenylate and Guanylate cyclase catalytic domain CUN60_10235 PF00672 HAMP domain CUN60_10265 PF00459 Inositol monophosphatase family CUN60_10270 PF01634 ATP phosphoribosyltransferase CUN60_10270 PF08029 HisG, C-terminal domain CUN60_10275 PF01300 Telomere recombination CUN60_10290 PF00962 Adenosine/AMP deaminase CUN60_10295 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CUN60_10300 PF13091 PLD-like domain CUN60_10320 PF01979 Amidohydrolase family CUN60_10325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CUN60_10325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CUN60_10330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_10330 PF03466 LysR substrate binding domain CUN60_10345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CUN60_10345 PF00364 Biotin-requiring enzyme CUN60_10345 PF02817 e3 binding domain CUN60_10360 PF16078 2-oxoglutarate dehydrogenase N-terminus CUN60_10360 PF00676 Dehydrogenase E1 component CUN60_10360 PF02779 Transketolase, pyrimidine binding domain CUN60_10360 PF16870 2-oxoglutarate dehydrogenase C-terminal CUN60_10370 PF00285 Citrate synthase, C-terminal domain CUN60_10375 PF13085 2Fe-2S iron-sulfur cluster binding domain CUN60_10380 PF00890 FAD binding domain CUN60_10380 PF02910 Fumarate reductase flavoprotein C-term CUN60_10390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CUN60_10395 PF00041 Fibronectin type III domain CUN60_10395 PF00704 Glycosyl hydrolases family 18 CUN60_10405 PF13580 SIS domain CUN60_10410 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CUN60_10425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUN60_10430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CUN60_10440 PF01472 PUA domain CUN60_10440 PF00696 Amino acid kinase family CUN60_10445 PF04445 Putative SAM-dependent methyltransferase CUN60_10450 PF02590 Predicted SPOUT methyltransferase CUN60_10465 PF12399 Branched-chain amino acid ATP-binding cassette transporter CUN60_10465 PF00005 ABC transporter CUN60_10470 PF03968 OstA-like protein CUN60_10485 PF00571 CBS domain CUN60_10485 PF01380 SIS domain CUN60_10495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CUN60_10500 PF02685 Glucokinase CUN60_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_10510 PF03466 LysR substrate binding domain CUN60_10520 PF17762 HTH domain found in ParB protein CUN60_10520 PF02195 ParB-like nuclease domain CUN60_10525 PF13614 AAA domain CUN60_10530 PF02527 rRNA small subunit methyltransferase G CUN60_10540 PF00472 RF-1 domain CUN60_10540 PF03462 PCRF domain CUN60_10545 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CUN60_10545 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CUN60_10545 PF01488 Shikimate / quinate 5-dehydrogenase CUN60_10550 PF02321 Outer membrane efflux protein CUN60_10555 PF00873 AcrB/AcrD/AcrF family CUN60_10560 PF01464 Transglycosylase SLT domain CUN60_10560 PF14718 Soluble lytic murein transglycosylase L domain CUN60_10565 PF01966 HD domain CUN60_10565 PF01743 Poly A polymerase head domain CUN60_10565 PF12627 Probable RNA and SrmB- binding site of polymerase A CUN60_10570 PF03458 UPF0126 domain CUN60_10575 PF00216 Bacterial DNA-binding protein CUN60_10585 PF01427 D-ala-D-ala dipeptidase CUN60_10590 PF03466 LysR substrate binding domain CUN60_10590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_10600 PF17946 RecC C-terminal domain CUN60_10620 PF03824 High-affinity nickel-transport protein CUN60_10635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CUN60_10660 PF00291 Pyridoxal-phosphate dependent enzyme CUN60_10665 PF00132 Bacterial transferase hexapeptide (six repeats) CUN60_10670 PF01810 LysE type translocator CUN60_10685 PF11339 Protein of unknown function (DUF3141) CUN60_10690 PF00871 Acetokinase family CUN60_10695 PF01515 Phosphate acetyl/butaryl transferase CUN60_10705 PF01476 LysM domain CUN60_10705 PF01551 Peptidase family M23 CUN60_10710 PF01975 Survival protein SurE CUN60_10715 PF02445 Quinolinate synthetase A protein CUN60_10720 PF01702 Queuine tRNA-ribosyltransferase CUN60_10730 PF07517 SecA DEAD-like domain CUN60_10730 PF01043 SecA preprotein cross-linking domain CUN60_10730 PF07516 SecA Wing and Scaffold domain CUN60_10730 PF02810 SEC-C motif CUN60_10735 PF00561 alpha/beta hydrolase fold CUN60_10740 PF01062 Bestrophin, RFP-TM, chloride channel CUN60_10760 PF00753 Metallo-beta-lactamase superfamily CUN60_10790 PF03099 Biotin/lipoate A/B protein ligase family CUN60_10795 PF04359 Protein of unknown function (DUF493) CUN60_10800 PF04079 Segregation and condensation complex subunit ScpB CUN60_10805 PF02616 Segregation and condensation protein ScpA CUN60_10815 PF02562 PhoH-like protein CUN60_10830 PF03948 Ribosomal protein L9, C-terminal domain CUN60_10830 PF01281 Ribosomal protein L9, N-terminal domain CUN60_10835 PF01084 Ribosomal protein S18 CUN60_10840 PF01250 Ribosomal protein S6 CUN60_10850 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CUN60_10850 PF02770 Acyl-CoA dehydrogenase, middle domain CUN60_10850 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CUN60_10850 PF09317 Domain of unknown function (DUF1974) CUN60_10860 PF00501 AMP-binding enzyme CUN60_10860 PF13193 AMP-binding enzyme C-terminal domain CUN60_10865 PF02803 Thiolase, C-terminal domain CUN60_10865 PF00108 Thiolase, N-terminal domain CUN60_10870 PF00378 Enoyl-CoA hydratase/isomerase CUN60_10870 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CUN60_10870 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CUN60_10875 PF00294 pfkB family carbohydrate kinase CUN60_10885 PF03601 Conserved hypothetical protein 698 CUN60_10890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CUN60_10905 PF07963 Prokaryotic N-terminal methylation motif CUN60_10905 PF00114 Pilin (bacterial filament) CUN60_10920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_10920 PF03466 LysR substrate binding domain CUN60_10970 PF02368 Bacterial Ig-like domain (group 2) CUN60_10970 PF11999 Protein of unknown function (DUF3494) CUN60_10975 PF07690 Major Facilitator Superfamily CUN60_11065 PF03466 LysR substrate binding domain CUN60_11065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_11075 PF00338 Ribosomal protein S10p/S20e CUN60_11080 PF00009 Elongation factor Tu GTP binding domain CUN60_11080 PF03143 Elongation factor Tu C-terminal domain CUN60_11080 PF03144 Elongation factor Tu domain 2 CUN60_11085 PF00679 Elongation factor G C-terminus CUN60_11085 PF03144 Elongation factor Tu domain 2 CUN60_11085 PF00009 Elongation factor Tu GTP binding domain CUN60_11085 PF03764 Elongation factor G, domain IV CUN60_11085 PF14492 Elongation Factor G, domain II CUN60_11090 PF00177 Ribosomal protein S7p/S5e CUN60_11095 PF00164 Ribosomal protein S12/S23 CUN60_11135 PF00854 POT family CUN60_11140 PF01112 Asparaginase CUN60_11145 PF03466 LysR substrate binding domain CUN60_11145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_11150 PF00171 Aldehyde dehydrogenase family CUN60_11155 PF13419 Haloacid dehalogenase-like hydrolase CUN60_11160 PF01196 Ribosomal protein L17 CUN60_11165 PF01000 RNA polymerase Rpb3/RpoA insert domain CUN60_11165 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CUN60_11165 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CUN60_11170 PF01479 S4 domain CUN60_11170 PF00163 Ribosomal protein S4/S9 N-terminal domain CUN60_11175 PF00411 Ribosomal protein S11 CUN60_11180 PF00416 Ribosomal protein S13/S18 CUN60_11185 PF00444 Ribosomal protein L36 CUN60_11190 PF01176 Translation initiation factor 1A / IF-1 CUN60_11195 PF00344 SecY translocase CUN60_11200 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CUN60_11205 PF00327 Ribosomal protein L30p/L7e CUN60_11210 PF00333 Ribosomal protein S5, N-terminal domain CUN60_11210 PF03719 Ribosomal protein S5, C-terminal domain CUN60_11215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CUN60_11220 PF00347 Ribosomal protein L6 CUN60_11225 PF00410 Ribosomal protein S8 CUN60_11230 PF00253 Ribosomal protein S14p/S29e CUN60_11235 PF00281 Ribosomal protein L5 CUN60_11235 PF00673 ribosomal L5P family C-terminus CUN60_11240 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CUN60_11240 PF00467 KOW motif CUN60_11245 PF00238 Ribosomal protein L14p/L23e CUN60_11255 PF02669 K+-transporting ATPase, c chain CUN60_11270 PF13493 Domain of unknown function (DUF4118) CUN60_11270 PF13492 GAF domain CUN60_11270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_11270 PF00512 His Kinase A (phospho-acceptor) domain CUN60_11270 PF02702 Osmosensitive K+ channel His kinase sensor domain CUN60_11275 PF00366 Ribosomal protein S17 CUN60_11280 PF00831 Ribosomal L29 protein CUN60_11285 PF00252 Ribosomal protein L16p/L10e CUN60_11290 PF00189 Ribosomal protein S3, C-terminal domain CUN60_11290 PF07650 KH domain CUN60_11295 PF00237 Ribosomal protein L22p/L17e CUN60_11300 PF00203 Ribosomal protein S19 CUN60_11305 PF00181 Ribosomal Proteins L2, RNA binding domain CUN60_11305 PF03947 Ribosomal Proteins L2, C-terminal domain CUN60_11310 PF00276 Ribosomal protein L23 CUN60_11315 PF00573 Ribosomal protein L4/L1 family CUN60_11320 PF00297 Ribosomal protein L3 CUN60_11325 PF00919 Uncharacterized protein family UPF0004 CUN60_11325 PF01938 TRAM domain CUN60_11325 PF04055 Radical SAM superfamily CUN60_11330 PF00701 Dihydrodipicolinate synthetase family CUN60_11335 PF01113 Dihydrodipicolinate reductase, N-terminus CUN60_11335 PF05173 Dihydrodipicolinate reductase, C-terminus CUN60_11365 PF00578 AhpC/TSA family CUN60_11365 PF02683 Cytochrome C biogenesis protein transmembrane region CUN60_11365 PF17991 Thioredoxin like C-terminal domain CUN60_11380 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CUN60_11385 PF00728 Glycosyl hydrolase family 20, catalytic domain CUN60_11385 PF02838 Glycosyl hydrolase family 20, domain 2 CUN60_11395 PF00999 Sodium/hydrogen exchanger family CUN60_11400 PF05188 MutS domain II CUN60_11400 PF05190 MutS family domain IV CUN60_11400 PF00488 MutS domain V CUN60_11400 PF01624 MutS domain I CUN60_11400 PF05192 MutS domain III CUN60_11405 PF00459 Inositol monophosphatase family CUN60_11415 PF00696 Amino acid kinase family CUN60_11415 PF01842 ACT domain CUN60_11415 PF13840 ACT domain CUN60_11415 PF03447 Homoserine dehydrogenase, NAD binding domain CUN60_11415 PF00742 Homoserine dehydrogenase CUN60_11420 PF00288 GHMP kinases N terminal domain CUN60_11420 PF08544 GHMP kinases C terminal CUN60_11425 PF14821 Threonine synthase N terminus CUN60_11425 PF00291 Pyridoxal-phosphate dependent enzyme CUN60_11440 PF01171 PP-loop family CUN60_11445 PF00120 Glutamine synthetase, catalytic domain CUN60_11445 PF03951 Glutamine synthetase, beta-Grasp domain CUN60_11450 PF00877 NlpC/P60 family CUN60_11460 PF12704 MacB-like periplasmic core domain CUN60_11460 PF02687 FtsX-like permease family CUN60_11465 PF00005 ABC transporter CUN60_11490 PF00464 Serine hydroxymethyltransferase CUN60_11495 PF00483 Nucleotidyl transferase CUN60_11495 PF01050 Mannose-6-phosphate isomerase CUN60_11505 PF00830 Ribosomal L28 family CUN60_11510 PF00471 Ribosomal protein L33 CUN60_11530 PF01380 SIS domain CUN60_11535 PF00762 Ferrochelatase CUN60_11540 PF02660 Glycerol-3-phosphate acyltransferase CUN60_11550 PF01521 Iron-sulphur cluster biosynthesis CUN60_11555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUN60_11555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUN60_11555 PF00205 Thiamine pyrophosphate enzyme, central domain CUN60_11570 PF07885 Ion channel CUN60_11570 PF02254 TrkA-N domain CUN60_11575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CUN60_11575 PF00205 Thiamine pyrophosphate enzyme, central domain CUN60_11575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CUN60_11580 PF03306 Alpha-acetolactate decarboxylase CUN60_11585 PF00889 Elongation factor TS CUN60_11590 PF00318 Ribosomal protein S2 CUN60_11595 PF03618 Kinase/pyrophosphorylase CUN60_11600 PF02600 Disulfide bond formation protein DsbB CUN60_11610 PF01270 Glycosyl hydrolases family 8 CUN60_11615 PF01270 Glycosyl hydrolases family 8 CUN60_11620 PF00950 ABC 3 transport family CUN60_11625 PF00005 ABC transporter CUN60_11635 PF02492 CobW/HypB/UreG, nucleotide-binding domain CUN60_11635 PF07683 Cobalamin synthesis protein cobW C-terminal domain CUN60_11645 PF18027 Cytosolic carboxypeptidase N-terminal domain CUN60_11645 PF00246 Zinc carboxypeptidase CUN60_11660 PF00005 ABC transporter CUN60_11670 PF02547 Queuosine biosynthesis protein CUN60_11675 PF01209 ubiE/COQ5 methyltransferase family CUN60_11685 PF03109 ABC1 family CUN60_11695 PF03466 LysR substrate binding domain CUN60_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_11700 PF03466 LysR substrate binding domain CUN60_11700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_11725 PF01245 Ribosomal protein L19 CUN60_11730 PF01746 tRNA (Guanine-1)-methyltransferase CUN60_11735 PF01782 RimM N-terminal domain CUN60_11735 PF05239 PRC-barrel domain CUN60_11740 PF00886 Ribosomal protein S16 CUN60_11745 PF18416 N-acetylglucosamine binding protein domain 2 CUN60_11745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CUN60_11750 PF00114 Pilin (bacterial filament) CUN60_11750 PF07963 Prokaryotic N-terminal methylation motif CUN60_11760 PF01926 50S ribosome-binding GTPase CUN60_11765 PF00579 tRNA synthetases class I (W and Y) CUN60_11770 PF02254 TrkA-N domain CUN60_11770 PF07885 Ion channel CUN60_11775 PF00533 BRCA1 C Terminus (BRCT) domain CUN60_11775 PF01653 NAD-dependent DNA ligase adenylation domain CUN60_11775 PF03120 NAD-dependent DNA ligase OB-fold domain CUN60_11775 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CUN60_11775 PF12826 Helix-hairpin-helix motif CUN60_11780 PF00962 Adenosine/AMP deaminase CUN60_11790 PF04751 Protein of unknown function (DUF615) CUN60_11795 PF08543 Phosphomethylpyrimidine kinase CUN60_11795 PF03070 TENA/THI-4/PQQC family CUN60_11795 PF02581 Thiamine monophosphate synthase CUN60_11800 PF08543 Phosphomethylpyrimidine kinase CUN60_11805 PF02110 Hydroxyethylthiazole kinase family CUN60_11810 PF02581 Thiamine monophosphate synthase CUN60_11830 PF18416 N-acetylglucosamine binding protein domain 2 CUN60_11830 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CUN60_11860 PF00465 Iron-containing alcohol dehydrogenase CUN60_11865 PF00114 Pilin (bacterial filament) CUN60_11865 PF07963 Prokaryotic N-terminal methylation motif CUN60_11880 PF03466 LysR substrate binding domain CUN60_11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CUN60_11895 PF17831 Pyruvate dehydrogenase E1 component middle domain CUN60_11895 PF00456 Transketolase, thiamine diphosphate binding domain CUN60_11900 PF00923 Transaldolase/Fructose-6-phosphate aldolase CUN60_11905 PF08544 GHMP kinases C terminal CUN60_11905 PF00288 GHMP kinases N terminal domain CUN60_11915 PF14572 Phosphoribosyl synthetase-associated domain CUN60_11915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CUN60_11920 PF01451 Low molecular weight phosphotyrosine protein phosphatase CUN60_11925 PF01553 Acyltransferase CUN60_11930 PF08241 Methyltransferase domain CUN60_11935 PF00156 Phosphoribosyl transferase domain CUN60_11945 PF13407 Periplasmic binding protein domain CUN60_11950 PF02653 Branched-chain amino acid transport system / permease component CUN60_11955 PF00005 ABC transporter CUN60_11960 PF05025 RbsD / FucU transport protein family CUN60_11965 PF00294 pfkB family carbohydrate kinase CUN60_11995 PF06071 Protein of unknown function (DUF933) CUN60_11995 PF01926 50S ribosome-binding GTPase CUN60_12010 PF00265 Thymidine kinase CUN60_12050 PF13356 Arm DNA-binding domain CUN60_12050 PF00589 Phage integrase family CUN60_12060 PF00448 SRP54-type protein, GTPase domain CUN60_12060 PF02881 SRP54-type protein, helical bundle domain CUN60_12060 PF02978 Signal peptide binding domain CUN60_12065 PF02401 LytB protein CUN60_12070 PF01252 Signal peptidase (SPase) II CUN60_12075 PF06827 Zinc finger found in FPG and IleRS CUN60_12075 PF08264 Anticodon-binding domain of tRNA CUN60_12075 PF00133 tRNA synthetases class I (I, L, M and V) CUN60_12080 PF01687 Riboflavin kinase CUN60_12080 PF06574 FAD synthetase CUN60_12085 PF01389 OmpA-like transmembrane domain CUN60_12085 PF00691 OmpA family CUN60_12090 PF02230 Phospholipase/Carboxylesterase CUN60_12095 PF00202 Aminotransferase class-III CUN60_12100 PF13361 UvrD-like helicase C-terminal domain CUN60_12100 PF00580 UvrD/REP helicase N-terminal domain CUN60_12115 PF00483 Nucleotidyl transferase CUN60_12120 PF04362 Bacterial Fe(2+) trafficking CUN60_12125 PF00109 Beta-ketoacyl synthase, N-terminal domain CUN60_12125 PF02801 Beta-ketoacyl synthase, C-terminal domain CUN60_12130 PF02896 PEP-utilising enzyme, TIM barrel domain CUN60_12130 PF00391 PEP-utilising enzyme, mobile domain CUN60_12130 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CUN60_12160 PF07963 Prokaryotic N-terminal methylation motif CUN60_12185 PF00266 Aminotransferase class-V CUN60_12205 PF00474 Sodium:solute symporter family CUN60_12210 PF17191 RecG wedge domain CUN60_12210 PF13749 Putative ATP-dependent DNA helicase recG C-terminal CUN60_12210 PF00270 DEAD/DEAH box helicase CUN60_12215 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 CUN60_12235 PF08889 WbqC-like protein family CUN60_12240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CUN60_12250 PF00733 Asparagine synthase CUN60_12250 PF13537 Glutamine amidotransferase domain CUN60_12260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CUN60_12265 PF00535 Glycosyl transferase family 2 CUN60_12305 PF01370 NAD dependent epimerase/dehydratase family CUN60_12310 PF04060 Putative Fe-S cluster CUN60_12320 PF03969 AFG1-like ATPase CUN60_12360 PF01168 Alanine racemase, N-terminal domain CUN60_12365 PF03807 NADP oxidoreductase coenzyme F420-dependent CUN60_12365 PF14748 Pyrroline-5-carboxylate reductase dimerisation CUN60_12370 PF02463 RecF/RecN/SMC N terminal domain CUN60_12375 PF01513 ATP-NAD kinase CUN60_12380 PF01648 4'-phosphopantetheinyl transferase superfamily CUN60_12385 PF01810 LysE type translocator CUN60_12390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CUN60_12395 PF00083 Sugar (and other) transporter CUN60_12410 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath CUN60_12425 PF06715 Gp5 C-terminal repeat (3 copies) CUN60_12425 PF04717 Type VI secretion system, phage-baseplate injector CUN60_12430 PF07724 AAA domain (Cdc48 subfamily) CUN60_12430 PF10431 C-terminal, D2-small domain, of ClpB protein CUN60_12430 PF17871 AAA lid domain CUN60_12430 PF00004 ATPase family associated with various cellular activities (AAA) CUN60_12455 PF07497 Rho termination factor, RNA-binding domain CUN60_12455 PF07498 Rho termination factor, N-terminal domain CUN60_12455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CUN60_12460 PF00085 Thioredoxin CUN60_12465 PF04998 RNA polymerase Rpb1, domain 5 CUN60_12465 PF04983 RNA polymerase Rpb1, domain 3 CUN60_12465 PF04997 RNA polymerase Rpb1, domain 1 CUN60_12465 PF05000 RNA polymerase Rpb1, domain 4 CUN60_12465 PF00623 RNA polymerase Rpb1, domain 2 CUN60_12475 PF16320 Ribosomal protein L7/L12 dimerisation domain CUN60_12475 PF00542 Ribosomal protein L7/L12 C-terminal domain CUN60_12480 PF00466 Ribosomal protein L10 CUN60_12485 PF00687 Ribosomal protein L1p/L10e family CUN60_12490 PF03946 Ribosomal protein L11, N-terminal domain CUN60_12490 PF00298 Ribosomal protein L11, RNA binding domain CUN60_12515 PF00749 tRNA synthetases class I (E and Q), catalytic domain CUN60_12520 PF00501 AMP-binding enzyme CUN60_12520 PF13193 AMP-binding enzyme C-terminal domain CUN60_12525 PF01435 Peptidase family M48 CUN60_12525 PF13181 Tetratricopeptide repeat CUN60_12550 PF01121 Dephospho-CoA kinase CUN60_12555 PF01478 Type IV leader peptidase family CUN60_12555 PF06750 Bacterial Peptidase A24 N-terminal domain CUN60_12560 PF00482 Type II secretion system (T2SS), protein F CUN60_12565 PF00482 Type II secretion system (T2SS), protein F CUN60_12570 PF00437 Type II/IV secretion system protein CUN60_12570 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CUN60_12575 PF01595 Cyclin M transmembrane N-terminal domain CUN60_12575 PF03471 Transporter associated domain CUN60_12575 PF00571 CBS domain CUN60_12580 PF13520 Amino acid permease CUN60_12585 PF00118 TCP-1/cpn60 chaperonin family CUN60_12590 PF00166 Chaperonin 10 Kd subunit CUN60_12600 PF00728 Glycosyl hydrolase family 20, catalytic domain CUN60_12600 PF02838 Glycosyl hydrolase family 20, domain 2 CUN60_12615 PF00072 Response regulator receiver domain CUN60_12620 PF00512 His Kinase A (phospho-acceptor) domain CUN60_12620 PF00072 Response regulator receiver domain CUN60_12620 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CUN60_12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_12620 PF01627 Hpt domain CUN60_12620 PF00672 HAMP domain CUN60_12625 PF01627 Hpt domain CUN60_12625 PF00672 HAMP domain CUN60_12625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CUN60_12625 PF00512 His Kinase A (phospho-acceptor) domain CUN60_12625 PF00072 Response regulator receiver domain CUN60_12625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CUN60_12630 PF03707 Bacterial signalling protein N terminal repeat CUN60_12630 PF00990 Diguanylate cyclase, GGDEF domain CUN60_12630 PF00563 EAL domain CUN60_12640 PF00535 Glycosyl transferase family 2 CUN60_12660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CUN60_12660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CUN60_12665 PF01985 CRS1 / YhbY (CRM) domain CUN60_12670 PF13520 Amino acid permease CUN60_12675 PF17827 PrmC N-terminal domain CUN60_12675 PF13847 Methyltransferase domain CUN60_12685 PF02219 Methylenetetrahydrofolate reductase CUN60_12690 PF07722 Peptidase C26 CUN60_12740 PF00106 short chain dehydrogenase CUN60_12755 PF00953 Glycosyl transferase family 4 CUN60_12755 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CUN60_12765 PF01370 NAD dependent epimerase/dehydratase family CUN60_12770 PF13537 Glutamine amidotransferase domain CUN60_12770 PF00733 Asparagine synthase CUN60_12785 PF00733 Asparagine synthase CUN60_12785 PF13537 Glutamine amidotransferase domain CUN60_12795 PF08241 Methyltransferase domain CUN60_12800 PF00561 alpha/beta hydrolase fold CUN60_12800 PF07021 Methionine biosynthesis protein MetW CUN60_12805 PF16363 GDP-mannose 4,6 dehydratase CUN60_12820 PF01370 NAD dependent epimerase/dehydratase family