locus-tag class description BSQ44_00005 PF00448 SRP54-type protein, GTPase domain BSQ44_00005 PF02881 SRP54-type protein, helical bundle domain BSQ44_00010 PF04055 Radical SAM superfamily BSQ44_00010 PF00919 Uncharacterized protein family UPF0004 BSQ44_00015 PF01678 Diaminopimelate epimerase BSQ44_00020 PF07043 Protein of unknown function (DUF1328) BSQ44_00030 PF02974 Protease inhibitor Inh BSQ44_00035 PF03969 AFG1-like ATPase BSQ44_00040 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BSQ44_00040 PF00056 lactate/malate dehydrogenase, NAD binding domain BSQ44_00045 PF00549 CoA-ligase BSQ44_00045 PF08442 ATP-grasp domain BSQ44_00065 PF02629 CoA binding domain BSQ44_00065 PF00549 CoA-ligase BSQ44_00070 PF16078 2-oxoglutarate dehydrogenase N-terminus BSQ44_00070 PF00676 Dehydrogenase E1 component BSQ44_00070 PF16870 2-oxoglutarate dehydrogenase C-terminal BSQ44_00070 PF02779 Transketolase, pyrimidine binding domain BSQ44_00075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSQ44_00075 PF00364 Biotin-requiring enzyme BSQ44_00075 PF02817 e3 binding domain BSQ44_00080 PF01810 LysE type translocator BSQ44_00090 PF00709 Adenylosuccinate synthetase BSQ44_00100 PF00140 Sigma-70 factor, region 1.2 BSQ44_00100 PF04542 Sigma-70 region 2 BSQ44_00100 PF04545 Sigma-70, region 4 BSQ44_00105 PF00849 RNA pseudouridylate synthase BSQ44_00115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_00120 PF01709 Transcriptional regulator BSQ44_00135 PF00106 short chain dehydrogenase BSQ44_00145 PF01197 Ribosomal protein L31 BSQ44_00150 PF00005 ABC transporter BSQ44_00150 PF00664 ABC transporter transmembrane region BSQ44_00160 PF07687 Peptidase dimerisation domain BSQ44_00160 PF01546 Peptidase family M20/M25/M40 BSQ44_00165 PF00890 FAD binding domain BSQ44_00190 PF13677 Membrane MotB of proton-channel complex MotA/MotB BSQ44_00190 PF00691 OmpA family BSQ44_00200 PF03006 Haemolysin-III related BSQ44_00205 PF08361 MAATS-type transcriptional repressor, C-terminal region BSQ44_00205 PF00440 Bacterial regulatory proteins, tetR family BSQ44_00210 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_00210 PF01799 [2Fe-2S] binding domain BSQ44_00215 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_00230 PF00873 AcrB/AcrD/AcrF family BSQ44_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_00250 PF03466 LysR substrate binding domain BSQ44_00255 PF07690 Major Facilitator Superfamily BSQ44_00260 PF00764 Arginosuccinate synthase BSQ44_00265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_00275 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_00295 PF11953 Domain of unknown function (DUF3470) BSQ44_00295 PF00037 4Fe-4S binding domain BSQ44_00300 PF02559 CarD-like/TRCF domain BSQ44_00305 PF02617 ATP-dependent Clp protease adaptor protein ClpS BSQ44_00315 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSQ44_00315 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_00315 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_00315 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_00320 PF04545 Sigma-70, region 4 BSQ44_00320 PF04542 Sigma-70 region 2 BSQ44_00320 PF00140 Sigma-70 factor, region 1.2 BSQ44_00330 PF00005 ABC transporter BSQ44_00335 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_00340 PF01547 Bacterial extracellular solute-binding protein BSQ44_00350 PF00005 ABC transporter BSQ44_00350 PF16326 ABC transporter C-terminal domain BSQ44_00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_00360 PF00171 Aldehyde dehydrogenase family BSQ44_00380 PF00701 Dihydrodipicolinate synthetase family BSQ44_00385 PF01266 FAD dependent oxidoreductase BSQ44_00390 PF05544 Proline racemase BSQ44_00395 PF02653 Branched-chain amino acid transport system / permease component BSQ44_00400 PF02653 Branched-chain amino acid transport system / permease component BSQ44_00400 PF11862 Domain of unknown function (DUF3382) BSQ44_00405 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_00405 PF00005 ABC transporter BSQ44_00410 PF00005 ABC transporter BSQ44_00420 PF13458 Periplasmic binding protein BSQ44_00425 PF00682 HMGL-like BSQ44_00425 PF02436 Conserved carboxylase domain BSQ44_00425 PF00364 Biotin-requiring enzyme BSQ44_00425 PF00289 Biotin carboxylase, N-terminal domain BSQ44_00425 PF02785 Biotin carboxylase C-terminal domain BSQ44_00425 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSQ44_00435 PF01593 Flavin containing amine oxidoreductase BSQ44_00445 PF00719 Inorganic pyrophosphatase BSQ44_00455 PF02594 Uncharacterised ACR, YggU family COG1872 BSQ44_00460 PF02325 YGGT family BSQ44_00465 PF02774 Semialdehyde dehydrogenase, dimerisation domain BSQ44_00465 PF01118 Semialdehyde dehydrogenase, NAD binding domain BSQ44_00475 PF00886 Ribosomal protein S16 BSQ44_00480 PF01817 Chorismate mutase type II BSQ44_00480 PF02153 Prephenate dehydrogenase BSQ44_00485 PF00448 SRP54-type protein, GTPase domain BSQ44_00485 PF02881 SRP54-type protein, helical bundle domain BSQ44_00485 PF02978 Signal peptide binding domain BSQ44_00490 PF15887 Putative zinc-binding metallo-peptidase BSQ44_00490 PF10005 zinc-ribbon domain BSQ44_00495 PF01047 MarR family BSQ44_00495 PF00583 Acetyltransferase (GNAT) family BSQ44_00505 PF01047 MarR family BSQ44_00510 PF01878 EVE domain BSQ44_00525 PF04011 LemA family BSQ44_00550 PF00580 UvrD/REP helicase N-terminal domain BSQ44_00550 PF13361 UvrD-like helicase C-terminal domain BSQ44_00555 PF02796 Helix-turn-helix domain of resolvase BSQ44_00555 PF00239 Resolvase, N terminal domain BSQ44_00590 PF00069 Protein kinase domain BSQ44_00590 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_00600 PF02661 Fic/DOC family BSQ44_00610 PF03144 Elongation factor Tu domain 2 BSQ44_00610 PF06421 GTP-binding protein LepA C-terminus BSQ44_00610 PF00009 Elongation factor Tu GTP binding domain BSQ44_00610 PF00679 Elongation factor G C-terminus BSQ44_00620 PF04304 Protein of unknown function (DUF454) BSQ44_00625 PF00127 Copper binding proteins, plastocyanin/azurin family BSQ44_00630 PF01571 Aminomethyltransferase folate-binding domain BSQ44_00630 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_00630 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_00630 PF17806 Sarcosine oxidase A3 domain BSQ44_00635 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_00640 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_00645 PF08468 Methyltransferase small domain N-terminal BSQ44_00645 PF05175 Methyltransferase small domain BSQ44_00655 PF02308 MgtC family BSQ44_00660 PF00330 Aconitase family (aconitate hydratase) BSQ44_00665 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_00695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BSQ44_00705 PF00890 FAD binding domain BSQ44_00705 PF02910 Fumarate reductase flavoprotein C-term BSQ44_00710 PF13237 4Fe-4S dicluster domain BSQ44_00710 PF13085 2Fe-2S iron-sulfur cluster binding domain BSQ44_00715 PF10127 RNA repair pathway DNA polymerase beta family BSQ44_00720 PF04337 Protein of unknown function, DUF480 BSQ44_00725 PF00196 Bacterial regulatory proteins, luxR family BSQ44_00725 PF00072 Response regulator receiver domain BSQ44_00735 PF01625 Peptide methionine sulfoxide reductase BSQ44_00740 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BSQ44_00740 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BSQ44_00745 PF02566 OsmC-like protein BSQ44_00750 PF01494 FAD binding domain BSQ44_00760 PF00543 Nitrogen regulatory protein P-II BSQ44_00765 PF00909 Ammonium Transporter Family BSQ44_00770 PF17854 FtsK alpha domain BSQ44_00770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BSQ44_00770 PF09397 Ftsk gamma domain BSQ44_00770 PF01580 FtsK/SpoIIIE family BSQ44_00775 PF03548 Outer membrane lipoprotein carrier protein LolA BSQ44_00795 PF00072 Response regulator receiver domain BSQ44_00795 PF00486 Transcriptional regulatory protein, C terminal BSQ44_00825 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BSQ44_00825 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BSQ44_00830 PF00814 Glycoprotease family BSQ44_00835 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BSQ44_00835 PF03900 Porphobilinogen deaminase, C-terminal domain BSQ44_00860 PF00958 GMP synthase C terminal domain BSQ44_00860 PF02540 NAD synthase BSQ44_00860 PF00117 Glutamine amidotransferase class-I BSQ44_00870 PF01245 Ribosomal protein L19 BSQ44_00875 PF01381 Helix-turn-helix BSQ44_00875 PF07883 Cupin domain BSQ44_00880 PF01925 Sulfite exporter TauE/SafE BSQ44_00890 PF01746 tRNA (Guanine-1)-methyltransferase BSQ44_00895 PF05239 PRC-barrel domain BSQ44_00895 PF01782 RimM N-terminal domain BSQ44_00900 PF02899 Phage integrase, N-terminal SAM-like domain BSQ44_00900 PF00589 Phage integrase family BSQ44_00920 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_00920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_00935 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_00945 PF03372 Endonuclease/Exonuclease/phosphatase family BSQ44_00950 PF00294 pfkB family carbohydrate kinase BSQ44_00955 PF00571 CBS domain BSQ44_00965 PF00171 Aldehyde dehydrogenase family BSQ44_00970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_00975 PF00920 Dehydratase family BSQ44_00985 PF02653 Branched-chain amino acid transport system / permease component BSQ44_00990 PF00005 ABC transporter BSQ44_00995 PF13407 Periplasmic binding protein domain BSQ44_01000 PF03466 LysR substrate binding domain BSQ44_01000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_01005 PF13407 Periplasmic binding protein domain BSQ44_01010 PF00005 ABC transporter BSQ44_01015 PF02653 Branched-chain amino acid transport system / permease component BSQ44_01020 PF02653 Branched-chain amino acid transport system / permease component BSQ44_01025 PF07729 FCD domain BSQ44_01025 PF00392 Bacterial regulatory proteins, gntR family BSQ44_01030 PF05035 2-keto-3-deoxy-galactonokinase BSQ44_01040 PF01261 Xylose isomerase-like TIM barrel BSQ44_01045 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_01045 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSQ44_01060 PF01261 Xylose isomerase-like TIM barrel BSQ44_01065 PF13378 Enolase C-terminal domain-like BSQ44_01065 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_01075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_01075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_01075 PF01842 ACT domain BSQ44_01080 PF17912 MalK OB fold domain BSQ44_01080 PF00005 ABC transporter BSQ44_01085 PF17912 MalK OB fold domain BSQ44_01085 PF00005 ABC transporter BSQ44_01095 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_01100 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_01120 PF09370 Phosphoenolpyruvate hydrolase-like BSQ44_01135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSQ44_01135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSQ44_01135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSQ44_01135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSQ44_01140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSQ44_01150 PF06253 Trimethylamine methyltransferase (MTTB) BSQ44_01155 PF02515 CoA-transferase family III BSQ44_01180 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSQ44_01180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_01185 PF16177 Acetyl-coenzyme A synthetase N-terminus BSQ44_01185 PF13193 AMP-binding enzyme C-terminal domain BSQ44_01185 PF00501 AMP-binding enzyme BSQ44_01205 PF00274 Fructose-bisphosphate aldolase class-I BSQ44_01215 PF00162 Phosphoglycerate kinase BSQ44_01220 PF03471 Transporter associated domain BSQ44_01220 PF00999 Sodium/hydrogen exchanger family BSQ44_01220 PF02080 TrkA-C domain BSQ44_01225 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BSQ44_01225 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BSQ44_01230 PF02779 Transketolase, pyrimidine binding domain BSQ44_01230 PF02780 Transketolase, C-terminal domain BSQ44_01230 PF00456 Transketolase, thiamine diphosphate binding domain BSQ44_01245 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) BSQ44_01250 PF16363 GDP-mannose 4,6 dehydratase BSQ44_01255 PF00398 Ribosomal RNA adenine dimethylase BSQ44_01265 PF00535 Glycosyl transferase family 2 BSQ44_01280 PF07976 Phenol hydroxylase, C-terminal dimerisation domain BSQ44_01280 PF01494 FAD binding domain BSQ44_01290 PF01641 SelR domain BSQ44_01320 PF00067 Cytochrome P450 BSQ44_01330 PF00561 alpha/beta hydrolase fold BSQ44_01335 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_01335 PF07724 AAA domain (Cdc48 subfamily) BSQ44_01335 PF17871 AAA lid domain BSQ44_01335 PF02861 Clp amino terminal domain, pathogenicity island component BSQ44_01335 PF10431 C-terminal, D2-small domain, of ClpB protein BSQ44_01340 PF01168 Alanine racemase, N-terminal domain BSQ44_01345 PF08264 Anticodon-binding domain of tRNA BSQ44_01345 PF13603 Leucyl-tRNA synthetase, Domain 2 BSQ44_01345 PF00133 tRNA synthetases class I (I, L, M and V) BSQ44_01360 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_01365 PF00923 Transaldolase/Fructose-6-phosphate aldolase BSQ44_01370 PF17764 3′ DNA-binding domain (3′BD) BSQ44_01370 PF18074 Primosomal protein N C-terminal domain BSQ44_01370 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BSQ44_01370 PF00270 DEAD/DEAH box helicase BSQ44_01390 PF00213 ATP synthase delta (OSCP) subunit BSQ44_01395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSQ44_01395 PF00306 ATP synthase alpha/beta chain, C terminal domain BSQ44_01395 PF02874 ATP synthase alpha/beta family, beta-barrel domain BSQ44_01400 PF00231 ATP synthase BSQ44_01405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSQ44_01405 PF02874 ATP synthase alpha/beta family, beta-barrel domain BSQ44_01410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BSQ44_01415 PF00293 NUDIX domain BSQ44_01425 PF13180 PDZ domain BSQ44_01425 PF03572 Peptidase family S41 BSQ44_01435 PF02590 Predicted SPOUT methyltransferase BSQ44_01450 PF01467 Cytidylyltransferase-like BSQ44_01460 PF00171 Aldehyde dehydrogenase family BSQ44_01465 PF00696 Amino acid kinase family BSQ44_01465 PF01472 PUA domain BSQ44_01470 PF01018 GTP1/OBG BSQ44_01470 PF01926 50S ribosome-binding GTPase BSQ44_01480 PF13302 Acetyltransferase (GNAT) domain BSQ44_01485 PF01016 Ribosomal L27 protein BSQ44_01490 PF00829 Ribosomal prokaryotic L21 protein BSQ44_01520 PF01220 Dehydroquinase class II BSQ44_01525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_01535 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_01545 PF07729 FCD domain BSQ44_01545 PF00392 Bacterial regulatory proteins, gntR family BSQ44_01550 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BSQ44_01550 PF08501 Shikimate dehydrogenase substrate binding domain BSQ44_01550 PF01488 Shikimate / quinate 5-dehydrogenase BSQ44_01555 PF01261 Xylose isomerase-like TIM barrel BSQ44_01555 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_01565 PF13358 DDE superfamily endonuclease BSQ44_01620 PF00698 Acyl transferase domain BSQ44_01620 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_01620 PF16197 Ketoacyl-synthetase C-terminal extension BSQ44_01620 PF00109 Beta-ketoacyl synthase, N-terminal domain BSQ44_01620 PF02801 Beta-ketoacyl synthase, C-terminal domain BSQ44_01620 PF08659 KR domain BSQ44_01620 PF00550 Phosphopantetheine attachment site BSQ44_01620 PF14765 Polyketide synthase dehydratase BSQ44_01635 PF01022 Bacterial regulatory protein, arsR family BSQ44_01650 PF00731 AIR carboxylase BSQ44_01655 PF02222 ATP-grasp domain BSQ44_01655 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BSQ44_01660 PF00444 Ribosomal protein L36 BSQ44_01680 PF00224 Pyruvate kinase, barrel domain BSQ44_01680 PF02887 Pyruvate kinase, alpha/beta domain BSQ44_01700 PF00679 Elongation factor G C-terminus BSQ44_01700 PF00009 Elongation factor Tu GTP binding domain BSQ44_01700 PF03144 Elongation factor Tu domain 2 BSQ44_01710 PF00571 CBS domain BSQ44_01710 PF02163 Peptidase family M50 BSQ44_01720 PF01432 Peptidase family M3 BSQ44_01725 PF01047 MarR family BSQ44_01730 PF07690 Major Facilitator Superfamily BSQ44_01735 PF00484 Carbonic anhydrase BSQ44_01765 PF05656 Protein of unknown function (DUF805) BSQ44_01770 PF00180 Isocitrate/isopropylmalate dehydrogenase BSQ44_01785 PF00694 Aconitase C-terminal domain BSQ44_01795 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_01795 PF16350 FAD dependent oxidoreductase central domain BSQ44_01795 PF01266 FAD dependent oxidoreductase BSQ44_01795 PF01571 Aminomethyltransferase folate-binding domain BSQ44_01800 PF03328 HpcH/HpaI aldolase/citrate lyase family BSQ44_01825 PF07733 Bacterial DNA polymerase III alpha NTPase domain BSQ44_01825 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BSQ44_01825 PF14579 Helix-hairpin-helix motif BSQ44_01825 PF02811 PHP domain BSQ44_01825 PF01336 OB-fold nucleic acid binding domain BSQ44_01830 PF03966 Trm112p-like protein BSQ44_01835 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_01835 PF05362 Lon protease (S16) C-terminal proteolytic domain BSQ44_01835 PF02190 ATP-dependent protease La (LON) substrate-binding domain BSQ44_01840 PF00085 Thioredoxin BSQ44_01850 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_01855 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_01860 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_01865 PF00171 Aldehyde dehydrogenase family BSQ44_01880 PF17762 HTH domain found in ParB protein BSQ44_01880 PF02195 ParB-like nuclease domain BSQ44_01885 PF13614 AAA domain BSQ44_01890 PF02527 rRNA small subunit methyltransferase G BSQ44_01895 PF01134 Glucose inhibited division protein A BSQ44_01895 PF13932 GidA associated domain BSQ44_01900 PF01926 50S ribosome-binding GTPase BSQ44_01900 PF12631 MnmE helical domain BSQ44_01900 PF10396 GTP-binding protein TrmE N-terminus BSQ44_01905 PF07498 Rho termination factor, N-terminal domain BSQ44_01905 PF07497 Rho termination factor, RNA-binding domain BSQ44_01905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSQ44_01910 PF03653 Uncharacterised protein family (UPF0093) BSQ44_01915 PF01208 Uroporphyrinogen decarboxylase (URO-D) BSQ44_01920 PF03618 Kinase/pyrophosphorylase BSQ44_01925 PF02545 Maf-like protein BSQ44_01930 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BSQ44_01930 PF01488 Shikimate / quinate 5-dehydrogenase BSQ44_01930 PF08501 Shikimate dehydrogenase substrate binding domain BSQ44_01935 PF01121 Dephospho-CoA kinase BSQ44_01940 PF00929 Exonuclease BSQ44_01945 PF02556 Preprotein translocase subunit SecB BSQ44_01950 PF04186 FxsA cytoplasmic membrane protein BSQ44_01970 PF06114 IrrE N-terminal-like domain BSQ44_01970 PF09856 Predicted transcriptional regulator (DUF2083) BSQ44_01970 PF01381 Helix-turn-helix BSQ44_01980 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_01980 PF07724 AAA domain (Cdc48 subfamily) BSQ44_01980 PF10431 C-terminal, D2-small domain, of ClpB protein BSQ44_01990 PF01636 Phosphotransferase enzyme family BSQ44_01995 PF00227 Proteasome subunit BSQ44_02000 PF00475 Imidazoleglycerol-phosphate dehydratase BSQ44_02010 PF00117 Glutamine amidotransferase class-I BSQ44_02015 PF00977 Histidine biosynthesis protein BSQ44_02025 PF00977 Histidine biosynthesis protein BSQ44_02030 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BSQ44_02035 PF00485 Phosphoribulokinase / Uridine kinase family BSQ44_02045 PF13532 2OG-Fe(II) oxygenase superfamily BSQ44_02050 PF01717 Cobalamin-independent synthase, Catalytic domain BSQ44_02055 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_02070 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSQ44_02070 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_02075 PF03069 Acetamidase/Formamidase family BSQ44_02080 PF00202 Aminotransferase class-III BSQ44_02090 PF01321 Creatinase/Prolidase N-terminal domain BSQ44_02090 PF00557 Metallopeptidase family M24 BSQ44_02095 PF07687 Peptidase dimerisation domain BSQ44_02095 PF01546 Peptidase family M20/M25/M40 BSQ44_02100 PF00392 Bacterial regulatory proteins, gntR family BSQ44_02100 PF07729 FCD domain BSQ44_02110 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_02110 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_02110 PF17806 Sarcosine oxidase A3 domain BSQ44_02110 PF01571 Aminomethyltransferase folate-binding domain BSQ44_02120 PF01266 FAD dependent oxidoreductase BSQ44_02125 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BSQ44_02125 PF08666 SAF domain BSQ44_02135 PF01676 Metalloenzyme superfamily BSQ44_02140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BSQ44_02140 PF06827 Zinc finger found in FPG and IleRS BSQ44_02140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BSQ44_02145 PF01435 Peptidase family M48 BSQ44_02150 PF00012 Hsp70 protein BSQ44_02160 PF00684 DnaJ central domain BSQ44_02160 PF01556 DnaJ C terminal domain BSQ44_02160 PF00226 DnaJ domain BSQ44_02165 PF13649 Methyltransferase domain BSQ44_02175 PF03358 NADPH-dependent FMN reductase BSQ44_02185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BSQ44_02195 PF00583 Acetyltransferase (GNAT) family BSQ44_02210 PF01165 Ribosomal protein S21 BSQ44_02220 PF10576 Iron-sulfur binding domain of endonuclease III BSQ44_02220 PF00633 Helix-hairpin-helix motif BSQ44_02220 PF00730 HhH-GPD superfamily base excision DNA repair protein BSQ44_02230 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BSQ44_02230 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BSQ44_02235 PF00294 pfkB family carbohydrate kinase BSQ44_02240 PF01156 Inosine-uridine preferring nucleoside hydrolase BSQ44_02245 PF00011 Hsp20/alpha crystallin family BSQ44_02255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BSQ44_02260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BSQ44_02260 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BSQ44_02265 PF00309 Sigma-54 factor, Activator interacting domain (AID) BSQ44_02265 PF04552 Sigma-54, DNA binding domain BSQ44_02265 PF04963 Sigma-54 factor, core binding domain BSQ44_02270 PF00005 ABC transporter BSQ44_02275 PF03968 OstA-like protein BSQ44_02285 PF01343 Peptidase family S49 BSQ44_02290 PF00216 Bacterial DNA-binding protein BSQ44_02300 PF02423 Ornithine cyclodeaminase/mu-crystallin family BSQ44_02305 PF10672 S-adenosylmethionine-dependent methyltransferase BSQ44_02305 PF02926 THUMP domain BSQ44_02305 PF01170 Putative RNA methylase family UPF0020 BSQ44_02310 PF00588 SpoU rRNA Methylase family BSQ44_02315 PF01252 Signal peptidase (SPase) II BSQ44_02320 PF00107 Zinc-binding dehydrogenase BSQ44_02320 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_02325 PF00672 HAMP domain BSQ44_02325 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BSQ44_02325 PF00072 Response regulator receiver domain BSQ44_02325 PF01627 Hpt domain BSQ44_02325 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_02335 PF03631 Virulence factor BrkB BSQ44_02350 PF08281 Sigma-70, region 4 BSQ44_02350 PF04542 Sigma-70 region 2 BSQ44_02380 PF00128 Alpha amylase, catalytic domain BSQ44_02385 PF02446 4-alpha-glucanotransferase BSQ44_02410 PF00188 Cysteine-rich secretory protein family BSQ44_02415 PF03358 NADPH-dependent FMN reductase BSQ44_02415 PF01566 Natural resistance-associated macrophage protein BSQ44_02425 PF07886 BA14K-like protein BSQ44_02435 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSQ44_02445 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSQ44_02445 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BSQ44_02445 PF00034 Cytochrome c BSQ44_02450 PF00034 Cytochrome c BSQ44_02465 PF00924 Mechanosensitive ion channel BSQ44_02470 PF00390 Malic enzyme, N-terminal domain BSQ44_02470 PF03949 Malic enzyme, NAD binding domain BSQ44_02470 PF01515 Phosphate acetyl/butaryl transferase BSQ44_02475 PF05190 MutS family domain IV BSQ44_02475 PF05188 MutS domain II BSQ44_02475 PF05192 MutS domain III BSQ44_02475 PF01624 MutS domain I BSQ44_02475 PF00488 MutS domain V BSQ44_02485 PF01494 FAD binding domain BSQ44_02505 PF04209 homogentisate 1,2-dioxygenase BSQ44_02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_02510 PF03459 TOBE domain BSQ44_02515 PF00005 ABC transporter BSQ44_02515 PF03459 TOBE domain BSQ44_02520 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_02540 PF03483 B3/4 domain BSQ44_02540 PF03484 tRNA synthetase B5 domain BSQ44_02540 PF03147 Ferredoxin-fold anticodon binding domain BSQ44_02540 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BSQ44_02540 PF01588 Putative tRNA binding domain BSQ44_02590 PF00263 Bacterial type II and III secretion system protein BSQ44_02590 PF04972 BON domain BSQ44_02590 PF13629 Pilus formation protein N terminal region BSQ44_02605 PF00437 Type II/IV secretion system protein BSQ44_02625 PF02789 Cytosol aminopeptidase family, N-terminal domain BSQ44_02625 PF00883 Cytosol aminopeptidase family, catalytic domain BSQ44_02630 PF00877 NlpC/P60 family BSQ44_02635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_02640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_02640 PF00005 ABC transporter BSQ44_02645 PF01850 PIN domain BSQ44_02655 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_02655 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_02660 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_02665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_02670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_02680 PF00034 Cytochrome c BSQ44_02685 PF02348 Cytidylyltransferase BSQ44_02690 PF01817 Chorismate mutase type II BSQ44_02690 PF00800 Prephenate dehydratase BSQ44_02690 PF01842 ACT domain BSQ44_02695 PF00293 NUDIX domain BSQ44_02695 PF09297 NADH pyrophosphatase zinc ribbon domain BSQ44_02715 PF13091 PLD-like domain BSQ44_02745 PF00982 Glycosyltransferase family 20 BSQ44_02750 PF02358 Trehalose-phosphatase BSQ44_02765 PF00128 Alpha amylase, catalytic domain BSQ44_02765 PF11896 Domain of unknown function (DUF3416) BSQ44_02770 PF00128 Alpha amylase, catalytic domain BSQ44_02770 PF16657 Maltogenic Amylase, C-terminal domain BSQ44_02775 PF02806 Alpha amylase, C-terminal all-beta domain BSQ44_02775 PF00128 Alpha amylase, catalytic domain BSQ44_02775 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSQ44_02780 PF00128 Alpha amylase, catalytic domain BSQ44_02780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSQ44_02785 PF11941 Domain of unknown function (DUF3459) BSQ44_02785 PF00128 Alpha amylase, catalytic domain BSQ44_02785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSQ44_02800 PF04542 Sigma-70 region 2 BSQ44_02800 PF08281 Sigma-70, region 4 BSQ44_02810 PF02735 Ku70/Ku80 beta-barrel domain BSQ44_02815 PF04679 ATP dependent DNA ligase C terminal region BSQ44_02815 PF01068 ATP dependent DNA ligase domain BSQ44_02815 PF13298 DNA polymerase Ligase (LigD) BSQ44_02820 PF02735 Ku70/Ku80 beta-barrel domain BSQ44_02830 PF02245 Methylpurine-DNA glycosylase (MPG) BSQ44_02855 PF12282 Signal transduction histidine kinase BSQ44_02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_02855 PF07568 Histidine kinase BSQ44_02860 PF00106 short chain dehydrogenase BSQ44_02865 PF00723 Glycosyl hydrolases family 15 BSQ44_02870 PF00958 GMP synthase C terminal domain BSQ44_02870 PF13302 Acetyltransferase (GNAT) domain BSQ44_02870 PF13673 Acetyltransferase (GNAT) domain BSQ44_02870 PF00117 Glutamine amidotransferase class-I BSQ44_02870 PF03352 Methyladenine glycosylase BSQ44_02875 PF04127 DNA / pantothenate metabolism flavoprotein BSQ44_02875 PF02441 Flavoprotein BSQ44_02880 PF01850 PIN domain BSQ44_02890 PF03109 ABC1 family BSQ44_02895 PF01209 ubiE/COQ5 methyltransferase family BSQ44_02900 PF00962 Adenosine/AMP deaminase BSQ44_02905 PF01799 [2Fe-2S] binding domain BSQ44_02905 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_02905 PF10518 TAT (twin-arginine translocation) pathway signal sequence BSQ44_02910 PF00941 FAD binding domain in molybdopterin dehydrogenase BSQ44_02910 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSQ44_02915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_02915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_02930 PF02885 Glycosyl transferase family, helical bundle domain BSQ44_02930 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BSQ44_02930 PF00591 Glycosyl transferase family, a/b domain BSQ44_02935 PF00171 Aldehyde dehydrogenase family BSQ44_02940 PF01791 DeoC/LacD family aldolase BSQ44_02945 PF01048 Phosphorylase superfamily BSQ44_02950 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BSQ44_02955 PF02653 Branched-chain amino acid transport system / permease component BSQ44_02960 PF02653 Branched-chain amino acid transport system / permease component BSQ44_02965 PF00005 ABC transporter BSQ44_02970 PF00465 Iron-containing alcohol dehydrogenase BSQ44_02980 PF04102 SlyX BSQ44_02995 PF02608 ABC transporter substrate-binding protein PnrA-like BSQ44_03000 PF01625 Peptide methionine sulfoxide reductase BSQ44_03010 PF07977 FabA-like domain BSQ44_03015 PF00109 Beta-ketoacyl synthase, N-terminal domain BSQ44_03015 PF02801 Beta-ketoacyl synthase, C-terminal domain BSQ44_03025 PF00563 EAL domain BSQ44_03025 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_03025 PF08447 PAS fold BSQ44_03025 PF08448 PAS fold BSQ44_03030 PF05175 Methyltransferase small domain BSQ44_03030 PF08468 Methyltransferase small domain N-terminal BSQ44_03035 PF00013 KH domain BSQ44_03035 PF03725 3' exoribonuclease family, domain 2 BSQ44_03035 PF01138 3' exoribonuclease family, domain 1 BSQ44_03035 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BSQ44_03035 PF00575 S1 RNA binding domain BSQ44_03040 PF00312 Ribosomal protein S15 BSQ44_03050 PF01544 CorA-like Mg2+ transporter protein BSQ44_03055 PF16198 tRNA pseudouridylate synthase B C-terminal domain BSQ44_03055 PF09157 Pseudouridine synthase II TruB, C-terminal BSQ44_03055 PF01509 TruB family pseudouridylate synthase (N terminal domain) BSQ44_03060 PF02033 Ribosome-binding factor A BSQ44_03065 PF00009 Elongation factor Tu GTP binding domain BSQ44_03065 PF11987 Translation-initiation factor 2 BSQ44_03065 PF04760 Translation initiation factor IF-2, N-terminal region BSQ44_03065 PF08364 Bacterial translation initiation factor IF-2 associated region BSQ44_03075 PF00575 S1 RNA binding domain BSQ44_03075 PF13184 NusA-like KH domain BSQ44_03075 PF08529 NusA N-terminal domain BSQ44_03080 PF17384 RimP C-terminal SH3 domain BSQ44_03080 PF02576 RimP N-terminal domain BSQ44_03095 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_03095 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_03100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_03105 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSQ44_03110 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_03135 PF00899 ThiF family BSQ44_03135 PF00581 Rhodanese-like domain BSQ44_03140 PF02463 RecF/RecN/SMC N terminal domain BSQ44_03145 PF02768 DNA polymerase III beta subunit, C-terminal domain BSQ44_03145 PF00712 DNA polymerase III beta subunit, N-terminal domain BSQ44_03145 PF02767 DNA polymerase III beta subunit, central domain BSQ44_03150 PF11638 DnaA N-terminal domain BSQ44_03150 PF00308 Bacterial dnaA protein BSQ44_03150 PF08299 Bacterial dnaA protein helix-turn-helix BSQ44_03155 PF01649 Ribosomal protein S20 BSQ44_03165 PF17969 L,D-transpeptidase C-terminal domain BSQ44_03165 PF01476 LysM domain BSQ44_03165 PF03734 L,D-transpeptidase catalytic domain BSQ44_03170 PF00128 Alpha amylase, catalytic domain BSQ44_03175 PF00128 Alpha amylase, catalytic domain BSQ44_03175 PF16657 Maltogenic Amylase, C-terminal domain BSQ44_03180 PF01679 Proteolipid membrane potential modulator BSQ44_03190 PF12792 CSS motif domain associated with EAL BSQ44_03190 PF00563 EAL domain BSQ44_03195 PF01842 ACT domain BSQ44_03195 PF08335 GlnD PII-uridylyltransferase BSQ44_03195 PF01966 HD domain BSQ44_03195 PF01909 Nucleotidyltransferase domain BSQ44_03200 PF03023 Lipid II flippase MurJ BSQ44_03215 PF00579 tRNA synthetases class I (W and Y) BSQ44_03225 PF01106 NifU-like domain BSQ44_03230 PF10417 C-terminal domain of 1-Cys peroxiredoxin BSQ44_03230 PF00578 AhpC/TSA family BSQ44_03250 PF13193 AMP-binding enzyme C-terminal domain BSQ44_03250 PF00501 AMP-binding enzyme BSQ44_03255 PF00072 Response regulator receiver domain BSQ44_03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_03260 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_03265 PF00270 DEAD/DEAH box helicase BSQ44_03265 PF04408 Helicase associated domain (HA2) BSQ44_03265 PF00271 Helicase conserved C-terminal domain BSQ44_03265 PF08482 ATP-dependent helicase C-terminal BSQ44_03270 PF00005 ABC transporter BSQ44_03275 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_03280 PF13416 Bacterial extracellular solute-binding protein BSQ44_03290 PF00392 Bacterial regulatory proteins, gntR family BSQ44_03290 PF07702 UTRA domain BSQ44_03295 PF06754 Phosphonate metabolism protein PhnG BSQ44_03300 PF05845 Bacterial phosphonate metabolism protein (PhnH) BSQ44_03305 PF05861 Bacterial phosphonate metabolism protein (PhnI) BSQ44_03320 PF06007 Phosphonate metabolism protein PhnJ BSQ44_03325 PF00005 ABC transporter BSQ44_03330 PF00005 ABC transporter BSQ44_03340 PF00005 ABC transporter BSQ44_03350 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_03355 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_03360 PF06299 Protein of unknown function (DUF1045) BSQ44_03365 PF07969 Amidohydrolase family BSQ44_03390 PF00210 Ferritin-like domain BSQ44_03410 PF01575 MaoC like domain BSQ44_03415 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_03420 PF01965 DJ-1/PfpI family BSQ44_03430 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_03435 PF00692 dUTPase BSQ44_03445 PF13533 Biotin-lipoyl like BSQ44_03450 PF07690 Major Facilitator Superfamily BSQ44_03455 PF04820 Tryptophan halogenase BSQ44_03465 PF03144 Elongation factor Tu domain 2 BSQ44_03465 PF16658 Class II release factor RF3, C-terminal domain BSQ44_03465 PF00009 Elongation factor Tu GTP binding domain BSQ44_03470 PF12804 MobA-like NTP transferase domain BSQ44_03475 PF00563 EAL domain BSQ44_03475 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_03475 PF03707 Bacterial signalling protein N terminal repeat BSQ44_03485 PF01266 FAD dependent oxidoreductase BSQ44_03495 PF02673 Bacitracin resistance protein BacA BSQ44_03500 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_03500 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_03505 PF08331 Domain of unknown function (DUF1730) BSQ44_03515 PF03411 Penicillin-insensitive murein endopeptidase BSQ44_03520 PF02142 MGS-like domain BSQ44_03525 PF02685 Glucokinase BSQ44_03530 PF00664 ABC transporter transmembrane region BSQ44_03530 PF00005 ABC transporter BSQ44_03535 PF05173 Dihydrodipicolinate reductase, C-terminus BSQ44_03535 PF01113 Dihydrodipicolinate reductase, N-terminus BSQ44_03540 PF01274 Malate synthase BSQ44_03545 PF00814 Glycoprotease family BSQ44_03560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_03560 PF00672 HAMP domain BSQ44_03565 PF01938 TRAM domain BSQ44_03565 PF00919 Uncharacterized protein family UPF0004 BSQ44_03565 PF04055 Radical SAM superfamily BSQ44_03570 PF02562 PhoH-like protein BSQ44_03575 PF02130 Uncharacterized protein family UPF0054 BSQ44_03580 PF01595 Cyclin M transmembrane N-terminal domain BSQ44_03580 PF00571 CBS domain BSQ44_03580 PF03471 Transporter associated domain BSQ44_03585 PF16363 GDP-mannose 4,6 dehydratase BSQ44_03590 PF00795 Carbon-nitrogen hydrolase BSQ44_03595 PF01381 Helix-turn-helix BSQ44_03600 PF02772 S-adenosylmethionine synthetase, central domain BSQ44_03600 PF02773 S-adenosylmethionine synthetase, C-terminal domain BSQ44_03600 PF00438 S-adenosylmethionine synthetase, N-terminal domain BSQ44_03605 PF02390 Putative methyltransferase BSQ44_03615 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BSQ44_03615 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BSQ44_03625 PF14698 Argininosuccinate lyase C-terminal BSQ44_03625 PF00206 Lyase BSQ44_03630 PF08534 Redoxin BSQ44_03640 PF00027 Cyclic nucleotide-binding domain BSQ44_03640 PF13302 Acetyltransferase (GNAT) domain BSQ44_03645 PF04286 Protein of unknown function (DUF445) BSQ44_03655 PF01070 FMN-dependent dehydrogenase BSQ44_03660 PF00300 Histidine phosphatase superfamily (branch 1) BSQ44_03665 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_03665 PF01968 Hydantoinase/oxoprolinase BSQ44_03675 PF00440 Bacterial regulatory proteins, tetR family BSQ44_03675 PF09209 Tetracyclin repressor-like, C-terminal domain BSQ44_03685 PF00005 ABC transporter BSQ44_03695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSQ44_03695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_03700 PF01370 NAD dependent epimerase/dehydratase family BSQ44_03705 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_03715 PF04471 Restriction endonuclease BSQ44_03715 PF14338 Mrr N-terminal domain BSQ44_03730 PF02463 RecF/RecN/SMC N terminal domain BSQ44_03740 PF02384 N-6 DNA Methylase BSQ44_03740 PF12161 HsdM N-terminal domain BSQ44_03755 PF00239 Resolvase, N terminal domain BSQ44_03755 PF02796 Helix-turn-helix domain of resolvase BSQ44_03780 PF13411 MerR HTH family regulatory protein BSQ44_03785 PF02411 MerT mercuric transport protein BSQ44_03790 PF00403 Heavy-metal-associated domain BSQ44_03800 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_03800 PF00403 Heavy-metal-associated domain BSQ44_03800 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_03855 PF13538 UvrD-like helicase C-terminal domain BSQ44_03855 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BSQ44_03855 PF14490 Helix-hairpin-helix containing domain BSQ44_03885 PF02195 ParB-like nuclease domain BSQ44_03890 PF00145 C-5 cytosine-specific DNA methylase BSQ44_03995 PF00877 NlpC/P60 family BSQ44_03995 PF01476 LysM domain BSQ44_04030 PF09335 SNARE associated Golgi protein BSQ44_04035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BSQ44_04035 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BSQ44_04050 PF02885 Glycosyl transferase family, helical bundle domain BSQ44_04050 PF00591 Glycosyl transferase family, a/b domain BSQ44_04050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BSQ44_04055 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BSQ44_04055 PF00753 Metallo-beta-lactamase superfamily BSQ44_04055 PF10996 Beta-Casp domain BSQ44_04060 PF14572 Phosphoribosyl synthetase-associated domain BSQ44_04060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BSQ44_04065 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase BSQ44_04065 PF09363 XFP C-terminal domain BSQ44_04065 PF09364 XFP N-terminal domain BSQ44_04070 PF00871 Acetokinase family BSQ44_04105 PF00892 EamA-like transporter family BSQ44_04120 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_04120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_04120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_04125 PF00440 Bacterial regulatory proteins, tetR family BSQ44_04130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_04130 PF03466 LysR substrate binding domain BSQ44_04140 PF00561 alpha/beta hydrolase fold BSQ44_04140 PF00364 Biotin-requiring enzyme BSQ44_04145 PF02779 Transketolase, pyrimidine binding domain BSQ44_04145 PF02780 Transketolase, C-terminal domain BSQ44_04150 PF00676 Dehydrogenase E1 component BSQ44_04155 PF12146 Serine aminopeptidase, S33 BSQ44_04160 PF00440 Bacterial regulatory proteins, tetR family BSQ44_04160 PF08361 MAATS-type transcriptional repressor, C-terminal region BSQ44_04165 PF13193 AMP-binding enzyme C-terminal domain BSQ44_04165 PF00501 AMP-binding enzyme BSQ44_04170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_04190 PF00356 Bacterial regulatory proteins, lacI family BSQ44_04195 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_04195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_04195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_04200 PF17934 Tetracyclin repressor-like, C-terminal domain BSQ44_04200 PF00440 Bacterial regulatory proteins, tetR family BSQ44_04205 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_04210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSQ44_04210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_04220 PF00892 EamA-like transporter family BSQ44_04230 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BSQ44_04245 PF03466 LysR substrate binding domain BSQ44_04245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_04255 PF13452 N-terminal half of MaoC dehydratase BSQ44_04265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_04265 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_04265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_04275 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04280 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04285 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_04285 PF00005 ABC transporter BSQ44_04290 PF00005 ABC transporter BSQ44_04295 PF00501 AMP-binding enzyme BSQ44_04305 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_04315 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_04320 PF07883 Cupin domain BSQ44_04335 PF03358 NADPH-dependent FMN reductase BSQ44_04340 PF00106 short chain dehydrogenase BSQ44_04345 PF07729 FCD domain BSQ44_04345 PF00392 Bacterial regulatory proteins, gntR family BSQ44_04350 PF00296 Luciferase-like monooxygenase BSQ44_04355 PF00561 alpha/beta hydrolase fold BSQ44_04355 PF00364 Biotin-requiring enzyme BSQ44_04375 PF00072 Response regulator receiver domain BSQ44_04385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_04390 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_04395 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_04395 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_04400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_04400 PF00005 ABC transporter BSQ44_04405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_04405 PF00005 ABC transporter BSQ44_04415 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_04415 PF01968 Hydantoinase/oxoprolinase BSQ44_04420 PF02538 Hydantoinase B/oxoprolinase BSQ44_04420 PF02538 Hydantoinase B/oxoprolinase BSQ44_04425 PF01177 Asp/Glu/Hydantoin racemase BSQ44_04430 PF00557 Metallopeptidase family M24 BSQ44_04430 PF01321 Creatinase/Prolidase N-terminal domain BSQ44_04440 PF02515 CoA-transferase family III BSQ44_04445 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_04445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_04445 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_04450 PF03972 MmgE/PrpD family BSQ44_04460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSQ44_04460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_04465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_04470 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_04475 PF07729 FCD domain BSQ44_04475 PF00392 Bacterial regulatory proteins, gntR family BSQ44_04485 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_04495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_04505 PF16347 Domain of unknown function (DUF4976) BSQ44_04505 PF00884 Sulfatase BSQ44_04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_04510 PF03466 LysR substrate binding domain BSQ44_04515 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_04525 PF00156 Phosphoribosyl transferase domain BSQ44_04530 PF01979 Amidohydrolase family BSQ44_04535 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04540 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04545 PF00005 ABC transporter BSQ44_04560 PF01594 AI-2E family transporter BSQ44_04570 PF01569 PAP2 superfamily BSQ44_04590 PF00999 Sodium/hydrogen exchanger family BSQ44_04620 PF03372 Endonuclease/Exonuclease/phosphatase family BSQ44_04630 PF13091 PLD-like domain BSQ44_04630 PF13396 Phospholipase_D-nuclease N-terminal BSQ44_04635 PF00080 Copper/zinc superoxide dismutase (SODC) BSQ44_04655 PF07886 BA14K-like protein BSQ44_04665 PF05544 Proline racemase BSQ44_04670 PF02515 CoA-transferase family III BSQ44_04680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_04680 PF00005 ABC transporter BSQ44_04685 PF00005 ABC transporter BSQ44_04685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_04690 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_04695 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_04700 PF00392 Bacterial regulatory proteins, gntR family BSQ44_04700 PF07729 FCD domain BSQ44_04705 PF00135 Carboxylesterase family BSQ44_04710 PF13193 AMP-binding enzyme C-terminal domain BSQ44_04710 PF00501 AMP-binding enzyme BSQ44_04720 PF00106 short chain dehydrogenase BSQ44_04725 PF13458 Periplasmic binding protein BSQ44_04730 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04740 PF00005 ABC transporter BSQ44_04740 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_04745 PF00005 ABC transporter BSQ44_04750 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04760 PF02653 Branched-chain amino acid transport system / permease component BSQ44_04770 PF00005 ABC transporter BSQ44_04775 PF01171 PP-loop family BSQ44_04775 PF11734 TilS substrate C-terminal domain BSQ44_04775 PF14437 MafB19-like deaminase BSQ44_04785 PF00005 ABC transporter BSQ44_04795 PF01979 Amidohydrolase family BSQ44_04820 PF00797 N-acetyltransferase BSQ44_04825 PF01594 AI-2E family transporter BSQ44_04835 PF00296 Luciferase-like monooxygenase BSQ44_04840 PF02575 YbaB/EbfC DNA-binding family BSQ44_04845 PF12169 DNA polymerase III subunits gamma and tau domain III BSQ44_04845 PF12170 DNA polymerase III tau subunit V interacting with alpha BSQ44_04845 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BSQ44_04875 PF02469 Fasciclin domain BSQ44_04880 PF01641 SelR domain BSQ44_04885 PF01926 50S ribosome-binding GTPase BSQ44_04890 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_04895 PF14849 YidC periplasmic domain BSQ44_04895 PF02096 60Kd inner membrane protein BSQ44_04900 PF00825 Ribonuclease P BSQ44_04905 PF00468 Ribosomal protein L34 BSQ44_04915 PF00403 Heavy-metal-associated domain BSQ44_04915 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_04915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_04920 PF00989 PAS fold BSQ44_04920 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_04920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_04935 PF01266 FAD dependent oxidoreductase BSQ44_04940 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_04945 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_04960 PF08402 TOBE domain BSQ44_04960 PF00005 ABC transporter BSQ44_04965 PF00171 Aldehyde dehydrogenase family BSQ44_04980 PF13662 Toprim domain BSQ44_04980 PF02132 RecR protein BSQ44_04990 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_05000 PF01327 Polypeptide deformylase BSQ44_05010 PF01850 PIN domain BSQ44_05015 PF00551 Formyl transferase BSQ44_05015 PF02911 Formyl transferase, C-terminal domain BSQ44_05025 PF01416 tRNA pseudouridine synthase BSQ44_05035 PF07687 Peptidase dimerisation domain BSQ44_05035 PF01546 Peptidase family M20/M25/M40 BSQ44_05045 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BSQ44_05045 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_05045 PF14602 Hexapeptide repeat of succinyl-transferase BSQ44_05060 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_05065 PF00440 Bacterial regulatory proteins, tetR family BSQ44_05065 PF02909 Tetracyclin repressor-like, C-terminal domain BSQ44_05070 PF07690 Major Facilitator Superfamily BSQ44_05085 PF00696 Amino acid kinase family BSQ44_05135 PF05974 Domain of unknown function (DUF892) BSQ44_05140 PF00005 ABC transporter BSQ44_05145 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_05155 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BSQ44_05155 PF04616 Glycosyl hydrolases family 43 BSQ44_05160 PF00248 Aldo/keto reductase family BSQ44_05165 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BSQ44_05165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_05180 PF04962 KduI/IolB family BSQ44_05185 PF00392 Bacterial regulatory proteins, gntR family BSQ44_05185 PF07729 FCD domain BSQ44_05190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_05200 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_05205 PF02614 Glucuronate isomerase BSQ44_05210 PF03330 Lytic transglycolase BSQ44_05220 PF08450 SMP-30/Gluconolactonase/LRE-like region BSQ44_05230 PF00563 EAL domain BSQ44_05230 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_05230 PF08447 PAS fold BSQ44_05230 PF08448 PAS fold BSQ44_05235 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BSQ44_05235 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BSQ44_05245 PF01078 Magnesium chelatase, subunit ChlI BSQ44_05245 PF13335 Magnesium chelatase, subunit ChlI C-terminal BSQ44_05255 PF00472 RF-1 domain BSQ44_05265 PF01293 Phosphoenolpyruvate carboxykinase BSQ44_05270 PF00072 Response regulator receiver domain BSQ44_05270 PF00486 Transcriptional regulatory protein, C terminal BSQ44_05275 PF00672 HAMP domain BSQ44_05275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_05275 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_05275 PF13755 Sensor N-terminal transmembrane domain BSQ44_05275 PF13756 Stimulus-sensing domain BSQ44_05285 PF03610 PTS system fructose IIA component BSQ44_05285 PF03830 PTS system sorbose subfamily IIB component BSQ44_05290 PF00381 PTS HPr component phosphorylation site BSQ44_05295 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BSQ44_05295 PF05221 S-adenosyl-L-homocysteine hydrolase BSQ44_05305 PF01636 Phosphotransferase enzyme family BSQ44_05310 PF12804 MobA-like NTP transferase domain BSQ44_05315 PF12705 PD-(D/E)XK nuclease superfamily BSQ44_05320 PF00580 UvrD/REP helicase N-terminal domain BSQ44_05320 PF13361 UvrD-like helicase C-terminal domain BSQ44_05325 PF00085 Thioredoxin BSQ44_05340 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BSQ44_05340 PF01409 tRNA synthetases class II core domain (F) BSQ44_05345 PF00453 Ribosomal protein L20 BSQ44_05350 PF01632 Ribosomal protein L35 BSQ44_05355 PF04191 Phospholipid methyltransferase BSQ44_05360 PF00707 Translation initiation factor IF-3, C-terminal domain BSQ44_05360 PF05198 Translation initiation factor IF-3, N-terminal domain BSQ44_05380 PF01037 Lrp/AsnC ligand binding domain BSQ44_05385 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_05400 PF02698 DUF218 domain BSQ44_05405 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BSQ44_05410 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_05425 PF00290 Tryptophan synthase alpha chain BSQ44_05430 PF01039 Carboxyl transferase domain BSQ44_05435 PF08245 Mur ligase middle domain BSQ44_05460 PF10997 Alternate to MurJ BSQ44_05465 PF07885 Ion channel BSQ44_05485 PF01740 STAS domain BSQ44_05485 PF00916 Sulfate permease family BSQ44_05515 PF00905 Penicillin binding protein transpeptidase domain BSQ44_05515 PF00912 Transglycosylase BSQ44_05545 PF00072 Response regulator receiver domain BSQ44_05545 PF00196 Bacterial regulatory proteins, luxR family BSQ44_05550 PF13193 AMP-binding enzyme C-terminal domain BSQ44_05550 PF00501 AMP-binding enzyme BSQ44_05560 PF00005 ABC transporter BSQ44_05560 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_05565 PF00005 ABC transporter BSQ44_05590 PF10414 Sirohaem synthase dimerisation region BSQ44_05590 PF14824 Sirohaem biosynthesis protein central BSQ44_05590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_05600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BSQ44_05600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BSQ44_05605 PF01507 Phosphoadenosine phosphosulfate reductase family BSQ44_05620 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_05620 PF08446 PAS fold BSQ44_05620 PF00360 Phytochrome region BSQ44_05620 PF01590 GAF domain BSQ44_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_05635 PF00294 pfkB family carbohydrate kinase BSQ44_05650 PF03458 UPF0126 domain BSQ44_05655 PF01025 GrpE BSQ44_05660 PF01628 HrcA protein C terminal domain BSQ44_05665 PF01138 3' exoribonuclease family, domain 1 BSQ44_05665 PF03725 3' exoribonuclease family, domain 2 BSQ44_05675 PF01725 Ham1 family BSQ44_05680 PF06969 HemN C-terminal domain BSQ44_05680 PF04055 Radical SAM superfamily BSQ44_05685 PF05532 CsbD-like BSQ44_05690 PF00575 S1 RNA binding domain BSQ44_05695 PF02224 Cytidylate kinase BSQ44_05710 PF07969 Amidohydrolase family BSQ44_05715 PF00005 ABC transporter BSQ44_05715 PF08402 TOBE domain BSQ44_05720 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_05725 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_05740 PF01425 Amidase BSQ44_05750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_05750 PF00672 HAMP domain BSQ44_05760 PF01527 Transposase BSQ44_05765 PF13276 HTH-like domain BSQ44_05765 PF13683 Integrase core domain BSQ44_05790 PF00239 Resolvase, N terminal domain BSQ44_05790 PF02796 Helix-turn-helix domain of resolvase BSQ44_05825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BSQ44_05840 PF02801 Beta-ketoacyl synthase, C-terminal domain BSQ44_05840 PF00109 Beta-ketoacyl synthase, N-terminal domain BSQ44_05845 PF00550 Phosphopantetheine attachment site BSQ44_05850 PF01774 UreD urease accessory protein BSQ44_05855 PF00547 Urease, gamma subunit BSQ44_05860 PF06906 Protein of unknown function (DUF1272) BSQ44_05865 PF04955 HupE / UreJ protein BSQ44_05870 PF00699 Urease beta subunit BSQ44_05880 PF01979 Amidohydrolase family BSQ44_05880 PF00449 Urease alpha-subunit, N-terminal domain BSQ44_05900 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_05900 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_05905 PF05194 UreE urease accessory protein, C-terminal domain BSQ44_05905 PF02814 UreE urease accessory protein, N-terminal domain BSQ44_05915 PF01730 UreF BSQ44_05925 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSQ44_05930 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BSQ44_05935 PF00266 Aminotransferase class-V BSQ44_05945 PF00027 Cyclic nucleotide-binding domain BSQ44_05945 PF00520 Ion transport protein BSQ44_05955 PF00204 DNA gyrase B BSQ44_05955 PF00986 DNA gyrase B subunit, carboxyl terminus BSQ44_05955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_05955 PF01751 Toprim domain BSQ44_05960 PF00067 Cytochrome P450 BSQ44_05965 PF05199 GMC oxidoreductase BSQ44_05965 PF00732 GMC oxidoreductase BSQ44_05970 PF04199 Putative cyclase BSQ44_05975 PF02021 Uncharacterised protein family UPF0102 BSQ44_05980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_05985 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BSQ44_06005 PF07536 HWE histidine kinase BSQ44_06005 PF08447 PAS fold BSQ44_06005 PF13426 PAS domain BSQ44_06020 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSQ44_06020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_06030 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_06035 PF01266 FAD dependent oxidoreductase BSQ44_06040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_06040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_06040 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_06045 PF07729 FCD domain BSQ44_06045 PF00392 Bacterial regulatory proteins, gntR family BSQ44_06085 PF01593 Flavin containing amine oxidoreductase BSQ44_06090 PF04542 Sigma-70 region 2 BSQ44_06090 PF04545 Sigma-70, region 4 BSQ44_06110 PF00875 DNA photolyase BSQ44_06110 PF03441 FAD binding domain of DNA photolyase BSQ44_06135 PF05697 Bacterial trigger factor protein (TF) BSQ44_06135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSQ44_06135 PF05698 Bacterial trigger factor protein (TF) C-terminus BSQ44_06140 PF01521 Iron-sulphur cluster biosynthesis BSQ44_06145 PF04828 Glutathione-dependent formaldehyde-activating enzyme BSQ44_06150 PF01384 Phosphate transporter family BSQ44_06155 PF00293 NUDIX domain BSQ44_06160 PF00156 Phosphoribosyl transferase domain BSQ44_06170 PF00271 Helicase conserved C-terminal domain BSQ44_06170 PF00270 DEAD/DEAH box helicase BSQ44_06175 PF12833 Helix-turn-helix domain BSQ44_06175 PF02311 AraC-like ligand binding domain BSQ44_06180 PF13581 Histidine kinase-like ATPase domain BSQ44_06180 PF07536 HWE histidine kinase BSQ44_06180 PF13426 PAS domain BSQ44_06185 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_06185 PF00585 C-terminal regulatory domain of Threonine dehydratase BSQ44_06190 PF02386 Cation transport protein BSQ44_06195 PF02386 Cation transport protein BSQ44_06210 PF13382 Adenine deaminase C-terminal domain BSQ44_06210 PF01979 Amidohydrolase family BSQ44_06220 PF02653 Branched-chain amino acid transport system / permease component BSQ44_06225 PF00005 ABC transporter BSQ44_06245 PF00005 ABC transporter BSQ44_06250 PF02653 Branched-chain amino acid transport system / permease component BSQ44_06270 PF13358 DDE superfamily endonuclease BSQ44_06280 PF00665 Integrase core domain BSQ44_06280 PF01527 Transposase BSQ44_06280 PF13276 HTH-like domain BSQ44_06285 PF02321 Outer membrane efflux protein BSQ44_06290 PF00873 AcrB/AcrD/AcrF family BSQ44_06300 PF00072 Response regulator receiver domain BSQ44_06300 PF00486 Transcriptional regulatory protein, C terminal BSQ44_06305 PF00672 HAMP domain BSQ44_06305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_06305 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_06305 PF16750 Sensor domain of 2-component histidine kinase BSQ44_06310 PF02371 Transposase IS116/IS110/IS902 family BSQ44_06310 PF01548 Transposase BSQ44_06315 PF13683 Integrase core domain BSQ44_06315 PF13276 HTH-like domain BSQ44_06325 PF00589 Phage integrase family BSQ44_06325 PF13356 Arm DNA-binding domain BSQ44_06355 PF02384 N-6 DNA Methylase BSQ44_06355 PF12161 HsdM N-terminal domain BSQ44_06370 PF01527 Transposase BSQ44_06375 PF13683 Integrase core domain BSQ44_06375 PF13276 HTH-like domain BSQ44_06390 PF02469 Fasciclin domain BSQ44_06400 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_06405 PF07568 Histidine kinase BSQ44_06405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_06405 PF12282 Signal transduction histidine kinase BSQ44_06410 PF00999 Sodium/hydrogen exchanger family BSQ44_06410 PF02254 TrkA-N domain BSQ44_06415 PF00850 Histone deacetylase domain BSQ44_06425 PF00672 HAMP domain BSQ44_06425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_06430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_06435 PF02277 Phosphoribosyltransferase BSQ44_06440 PF02654 Cobalamin-5-phosphate synthase BSQ44_06445 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSQ44_06445 PF07685 CobB/CobQ-like glutamine amidotransferase domain BSQ44_06450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_06455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_06465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_06470 PF02571 Precorrin-6x reductase CbiJ/CobK BSQ44_06475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_06480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BSQ44_06485 PF02570 Precorrin-8X methylmutase BSQ44_06490 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BSQ44_06495 PF02514 CobN/Magnesium Chelatase BSQ44_06500 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSQ44_06500 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSQ44_06520 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BSQ44_06525 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BSQ44_06530 PF07685 CobB/CobQ-like glutamine amidotransferase domain BSQ44_06530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSQ44_06535 PF03186 CobD/Cbib protein BSQ44_06540 PF00155 Aminotransferase class I and II BSQ44_06555 PF08267 Cobalamin-independent synthase, N-terminal domain BSQ44_06555 PF01717 Cobalamin-independent synthase, Catalytic domain BSQ44_06560 PF01979 Amidohydrolase family BSQ44_06570 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BSQ44_06570 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BSQ44_06575 PF09339 IclR helix-turn-helix domain BSQ44_06575 PF01614 Bacterial transcriptional regulator BSQ44_06585 PF02515 CoA-transferase family III BSQ44_06605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_06610 PF03358 NADPH-dependent FMN reductase BSQ44_06620 PF01546 Peptidase family M20/M25/M40 BSQ44_06620 PF07687 Peptidase dimerisation domain BSQ44_06625 PF00440 Bacterial regulatory proteins, tetR family BSQ44_06650 PF07237 Protein of unknown function (DUF1428) BSQ44_06655 PF00781 Diacylglycerol kinase catalytic domain BSQ44_06660 PF01367 5'-3' exonuclease, C-terminal SAM fold BSQ44_06660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BSQ44_06660 PF00476 DNA polymerase family A BSQ44_06660 PF01612 3'-5' exonuclease BSQ44_06670 PF01475 Ferric uptake regulator family BSQ44_06705 PF00155 Aminotransferase class I and II BSQ44_06720 PF01979 Amidohydrolase family BSQ44_06725 PF00221 Aromatic amino acid lyase BSQ44_06735 PF01175 Urocanase Rossmann-like domain BSQ44_06735 PF17391 Urocanase N-terminal domain BSQ44_06735 PF17392 Urocanase C-terminal domain BSQ44_06745 PF02627 Carboxymuconolactone decarboxylase family BSQ44_06750 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_06750 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSQ44_06755 PF03960 ArsC family BSQ44_06765 PF01022 Bacterial regulatory protein, arsR family BSQ44_06795 PF13356 Arm DNA-binding domain BSQ44_06795 PF00589 Phage integrase family BSQ44_06800 PF11849 Domain of unknown function (DUF3369) BSQ44_06805 PF13333 Integrase core domain BSQ44_06805 PF00665 Integrase core domain BSQ44_06805 PF13276 HTH-like domain BSQ44_06810 PF01527 Transposase BSQ44_06820 PF02073 Thermophilic metalloprotease (M29) BSQ44_06895 PF07536 HWE histidine kinase BSQ44_06895 PF08447 PAS fold BSQ44_06895 PF13426 PAS domain BSQ44_06910 PF13545 Crp-like helix-turn-helix domain BSQ44_06910 PF00027 Cyclic nucleotide-binding domain BSQ44_07005 PF03466 LysR substrate binding domain BSQ44_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_07010 PF02028 BCCT, betaine/carnitine/choline family transporter BSQ44_07015 PF06779 Uncharacterised MFS-type transporter YbfB BSQ44_07020 PF05992 SbmA/BacA-like family BSQ44_07040 PF01926 50S ribosome-binding GTPase BSQ44_07040 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BSQ44_07050 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter BSQ44_07055 PF00119 ATP synthase A chain BSQ44_07060 PF00137 ATP synthase subunit C BSQ44_07065 PF00430 ATP synthase B/B' CF(0) BSQ44_07070 PF00430 ATP synthase B/B' CF(0) BSQ44_07075 PF01351 Ribonuclease HII BSQ44_07080 PF02913 FAD linked oxidases, C-terminal domain BSQ44_07080 PF01565 FAD binding domain BSQ44_07085 PF03481 Putative GTP-binding controlling metal-binding BSQ44_07085 PF01300 Telomere recombination BSQ44_07095 PF05746 DALR anticodon binding domain BSQ44_07095 PF02092 Glycyl-tRNA synthetase beta subunit BSQ44_07105 PF02091 Glycyl-tRNA synthetase alpha subunit BSQ44_07125 PF00348 Polyprenyl synthetase BSQ44_07140 PF06965 Na+/H+ antiporter 1 BSQ44_07140 PF01343 Peptidase family S49 BSQ44_07150 PF08544 GHMP kinases C terminal BSQ44_07150 PF00288 GHMP kinases N terminal domain BSQ44_07155 PF00994 Probable molybdopterin binding domain BSQ44_07165 PF04055 Radical SAM superfamily BSQ44_07175 PF01040 UbiA prenyltransferase family BSQ44_07180 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BSQ44_07180 PF02844 Phosphoribosylglycinamide synthetase, N domain BSQ44_07180 PF02843 Phosphoribosylglycinamide synthetase, C domain BSQ44_07210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_07210 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_07210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_07210 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSQ44_07225 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_07230 PF01243 Pyridoxamine 5'-phosphate oxidase BSQ44_07230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BSQ44_07240 PF00226 DnaJ domain BSQ44_07240 PF01556 DnaJ C terminal domain BSQ44_07250 PF00300 Histidine phosphatase superfamily (branch 1) BSQ44_07260 PF01264 Chorismate synthase BSQ44_07265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BSQ44_07265 PF00925 GTP cyclohydrolase II BSQ44_07280 PF00850 Histone deacetylase domain BSQ44_07285 PF02609 Exonuclease VII small subunit BSQ44_07300 PF05726 Pirin C-terminal cupin domain BSQ44_07300 PF02678 Pirin BSQ44_07305 PF02780 Transketolase, C-terminal domain BSQ44_07305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BSQ44_07305 PF02779 Transketolase, pyrimidine binding domain BSQ44_07315 PF01479 S4 domain BSQ44_07315 PF01728 FtsJ-like methyltransferase BSQ44_07320 PF05958 tRNA (Uracil-5-)-methyltransferase BSQ44_07325 PF01494 FAD binding domain BSQ44_07330 PF02146 Sir2 family BSQ44_07335 PF01523 Putative modulator of DNA gyrase BSQ44_07350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSQ44_07350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BSQ44_07355 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSQ44_07360 PF01040 UbiA prenyltransferase family BSQ44_07365 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BSQ44_07370 PF00510 Cytochrome c oxidase subunit III BSQ44_07380 PF02104 SURF1 family BSQ44_07385 PF02401 LytB protein BSQ44_07390 PF01636 Phosphotransferase enzyme family BSQ44_07395 PF00075 RNase H BSQ44_07400 PF08534 Redoxin BSQ44_07410 PF02622 Uncharacterized ACR, COG1678 BSQ44_07415 PF03707 Bacterial signalling protein N terminal repeat BSQ44_07415 PF00563 EAL domain BSQ44_07415 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_07420 PF13302 Acetyltransferase (GNAT) domain BSQ44_07425 PF05193 Peptidase M16 inactive domain BSQ44_07425 PF00675 Insulinase (Peptidase family M16) BSQ44_07430 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_07430 PF14821 Threonine synthase N terminus BSQ44_07450 PF00196 Bacterial regulatory proteins, luxR family BSQ44_07450 PF00072 Response regulator receiver domain BSQ44_07455 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_07460 PF01555 DNA methylase BSQ44_07460 PF18755 Restriction Enzyme Adenine Methylase Associated BSQ44_07470 PF00633 Helix-hairpin-helix motif BSQ44_07470 PF00730 HhH-GPD superfamily base excision DNA repair protein BSQ44_07470 PF14815 NUDIX domain BSQ44_07480 PF13462 Thioredoxin BSQ44_07480 PF06965 Na+/H+ antiporter 1 BSQ44_07485 PF02463 RecF/RecN/SMC N terminal domain BSQ44_07515 PF00005 ABC transporter BSQ44_07520 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_07540 PF01594 AI-2E family transporter BSQ44_07550 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BSQ44_07550 PF02896 PEP-utilising enzyme, TIM barrel domain BSQ44_07550 PF00391 PEP-utilising enzyme, mobile domain BSQ44_07560 PF01527 Transposase BSQ44_07565 PF13683 Integrase core domain BSQ44_07565 PF13276 HTH-like domain BSQ44_07585 PF00202 Aminotransferase class-III BSQ44_07590 PF00440 Bacterial regulatory proteins, tetR family BSQ44_07595 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_07595 PF10518 TAT (twin-arginine translocation) pathway signal sequence BSQ44_07595 PF01799 [2Fe-2S] binding domain BSQ44_07600 PF00941 FAD binding domain in molybdopterin dehydrogenase BSQ44_07600 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSQ44_07605 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_07605 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_07625 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSQ44_07625 PF00034 Cytochrome c BSQ44_07625 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BSQ44_07630 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSQ44_07640 PF13193 AMP-binding enzyme C-terminal domain BSQ44_07640 PF00501 AMP-binding enzyme BSQ44_07655 PF06055 Exopolysaccharide synthesis, ExoD BSQ44_07665 PF02632 BioY family BSQ44_07680 PF00171 Aldehyde dehydrogenase family BSQ44_07685 PF00171 Aldehyde dehydrogenase family BSQ44_07695 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07705 PF00005 ABC transporter BSQ44_07705 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_07710 PF00005 ABC transporter BSQ44_07715 PF00171 Aldehyde dehydrogenase family BSQ44_07725 PF01571 Aminomethyltransferase folate-binding domain BSQ44_07730 PF07729 FCD domain BSQ44_07730 PF00392 Bacterial regulatory proteins, gntR family BSQ44_07735 PF00005 ABC transporter BSQ44_07740 PF00005 ABC transporter BSQ44_07740 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_07750 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07755 PF13458 Periplasmic binding protein BSQ44_07765 PF08447 PAS fold BSQ44_07765 PF13426 PAS domain BSQ44_07765 PF05231 MASE1 BSQ44_07765 PF00563 EAL domain BSQ44_07765 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_07765 PF08448 PAS fold BSQ44_07770 PF00005 ABC transporter BSQ44_07775 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_07775 PF00005 ABC transporter BSQ44_07785 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07800 PF00072 Response regulator receiver domain BSQ44_07800 PF00486 Transcriptional regulatory protein, C terminal BSQ44_07810 PF16736 Single Cache-like BSQ44_07810 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_07810 PF00989 PAS fold BSQ44_07820 PF00072 Response regulator receiver domain BSQ44_07855 PF07729 FCD domain BSQ44_07855 PF00392 Bacterial regulatory proteins, gntR family BSQ44_07860 PF13407 Periplasmic binding protein domain BSQ44_07865 PF00005 ABC transporter BSQ44_07870 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07875 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07880 PF08450 SMP-30/Gluconolactonase/LRE-like region BSQ44_07890 PF00005 ABC transporter BSQ44_07895 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07900 PF04198 Putative sugar-binding domain BSQ44_07905 PF00248 Aldo/keto reductase family BSQ44_07910 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BSQ44_07910 PF01266 FAD dependent oxidoreductase BSQ44_07920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSQ44_07920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSQ44_07935 PF01613 Flavin reductase like domain BSQ44_07940 PF13577 SnoaL-like domain BSQ44_07945 PF13380 CoA binding domain BSQ44_07945 PF13607 Succinyl-CoA ligase like flavodoxin domain BSQ44_07950 PF08450 SMP-30/Gluconolactonase/LRE-like region BSQ44_07975 PF02653 Branched-chain amino acid transport system / permease component BSQ44_07980 PF00005 ABC transporter BSQ44_07985 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_07985 PF00005 ABC transporter BSQ44_07990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_07990 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_07990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_07995 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_08000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_08000 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_08000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_08005 PF13193 AMP-binding enzyme C-terminal domain BSQ44_08005 PF00501 AMP-binding enzyme BSQ44_08020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_08035 PF01494 FAD binding domain BSQ44_08040 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_08045 PF00392 Bacterial regulatory proteins, gntR family BSQ44_08045 PF07729 FCD domain BSQ44_08060 PF13458 Periplasmic binding protein BSQ44_08065 PF02653 Branched-chain amino acid transport system / permease component BSQ44_08075 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_08075 PF00005 ABC transporter BSQ44_08080 PF00005 ABC transporter BSQ44_08080 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_08085 PF00005 ABC transporter BSQ44_08090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_08090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSQ44_08100 PF00920 Dehydratase family BSQ44_08105 PF00171 Aldehyde dehydrogenase family BSQ44_08110 PF03328 HpcH/HpaI aldolase/citrate lyase family BSQ44_08120 PF03061 Thioesterase superfamily BSQ44_08130 PF01968 Hydantoinase/oxoprolinase BSQ44_08130 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_08135 PF02538 Hydantoinase B/oxoprolinase BSQ44_08140 PF13458 Periplasmic binding protein BSQ44_08145 PF02653 Branched-chain amino acid transport system / permease component BSQ44_08155 PF00005 ABC transporter BSQ44_08155 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_08160 PF00005 ABC transporter BSQ44_08170 PF01571 Aminomethyltransferase folate-binding domain BSQ44_08170 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_08170 PF01266 FAD dependent oxidoreductase BSQ44_08170 PF16350 FAD dependent oxidoreductase central domain BSQ44_08185 PF01266 FAD dependent oxidoreductase BSQ44_08195 PF00005 ABC transporter BSQ44_08200 PF02653 Branched-chain amino acid transport system / permease component BSQ44_08210 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_08210 PF01968 Hydantoinase/oxoprolinase BSQ44_08215 PF02538 Hydantoinase B/oxoprolinase BSQ44_08220 PF00795 Carbon-nitrogen hydrolase BSQ44_08230 PF00166 Chaperonin 10 Kd subunit BSQ44_08235 PF00118 TCP-1/cpn60 chaperonin family BSQ44_08250 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_08275 PF00072 Response regulator receiver domain BSQ44_08275 PF00486 Transcriptional regulatory protein, C terminal BSQ44_08280 PF00072 Response regulator receiver domain BSQ44_08280 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_08285 PF10090 Histidine phosphotransferase C-terminal domain BSQ44_08300 PF00588 SpoU rRNA Methylase family BSQ44_08305 PF01022 Bacterial regulatory protein, arsR family BSQ44_08315 PF02515 CoA-transferase family III BSQ44_08320 PF00106 short chain dehydrogenase BSQ44_08325 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_08330 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_08340 PF00005 ABC transporter BSQ44_08340 PF08402 TOBE domain BSQ44_08360 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BSQ44_08370 PF02661 Fic/DOC family BSQ44_08385 PF00034 Cytochrome c BSQ44_08390 PF00265 Thymidine kinase BSQ44_08395 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BSQ44_08400 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_08405 PF00005 ABC transporter BSQ44_08405 PF00571 CBS domain BSQ44_08410 PF01268 Formate--tetrahydrofolate ligase BSQ44_08420 PF01569 PAP2 superfamily BSQ44_08425 PF10011 Predicted membrane protein (DUF2254) BSQ44_08435 PF04715 Anthranilate synthase component I, N terminal region BSQ44_08435 PF00117 Glutamine amidotransferase class-I BSQ44_08435 PF00425 chorismate binding enzyme BSQ44_08440 PF01545 Cation efflux family BSQ44_08440 PF16916 Dimerisation domain of Zinc Transporter BSQ44_08450 PF01842 ACT domain BSQ44_08450 PF00551 Formyl transferase BSQ44_08460 PF01571 Aminomethyltransferase folate-binding domain BSQ44_08470 PF02219 Methylenetetrahydrofolate reductase BSQ44_08485 PF01370 NAD dependent epimerase/dehydratase family BSQ44_08490 PF00343 Carbohydrate phosphorylase BSQ44_08495 PF00483 Nucleotidyl transferase BSQ44_08500 PF00534 Glycosyl transferases group 1 BSQ44_08500 PF08323 Starch synthase catalytic domain BSQ44_08505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSQ44_08505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSQ44_08505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSQ44_08505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSQ44_08510 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BSQ44_08510 PF00128 Alpha amylase, catalytic domain BSQ44_08570 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) BSQ44_08575 PF00436 Single-strand binding protein family BSQ44_08800 PF04865 Baseplate J-like protein BSQ44_08875 PF01757 Acyltransferase family BSQ44_08880 PF01757 Acyltransferase family BSQ44_08900 PF01050 Mannose-6-phosphate isomerase BSQ44_08900 PF00483 Nucleotidyl transferase BSQ44_08905 PF00171 Aldehyde dehydrogenase family BSQ44_08910 PF05199 GMC oxidoreductase BSQ44_08910 PF00732 GMC oxidoreductase BSQ44_08915 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_08920 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_08920 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_08925 PF12411 Choline sulfatase enzyme C terminal BSQ44_08925 PF00884 Sulfatase BSQ44_08930 PF13977 BetI-type transcriptional repressor, C-terminal BSQ44_08930 PF00440 Bacterial regulatory proteins, tetR family BSQ44_08940 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BSQ44_08950 PF02803 Thiolase, C-terminal domain BSQ44_08950 PF00108 Thiolase, N-terminal domain BSQ44_08980 PF01272 Transcription elongation factor, GreA/GreB, C-term BSQ44_08980 PF03449 Transcription elongation factor, N-terminal BSQ44_08985 PF01757 Acyltransferase family BSQ44_08990 PF01757 Acyltransferase family BSQ44_08995 PF01642 Methylmalonyl-CoA mutase BSQ44_08995 PF02310 B12 binding domain BSQ44_09000 PF01642 Methylmalonyl-CoA mutase BSQ44_09005 PF05872 Bacterial protein of unknown function (DUF853) BSQ44_09015 PF17969 L,D-transpeptidase C-terminal domain BSQ44_09015 PF01476 LysM domain BSQ44_09015 PF03734 L,D-transpeptidase catalytic domain BSQ44_09025 PF01063 Amino-transferase class IV BSQ44_09030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BSQ44_09030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BSQ44_09040 PF00034 Cytochrome c BSQ44_09045 PF01593 Flavin containing amine oxidoreductase BSQ44_09050 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BSQ44_09050 PF00326 Prolyl oligopeptidase family BSQ44_09055 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSQ44_09055 PF00361 Proton-conducting membrane transporter BSQ44_09055 PF13244 Domain of unknown function (DUF4040) BSQ44_09060 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BSQ44_09065 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSQ44_09070 PF00361 Proton-conducting membrane transporter BSQ44_09075 PF01899 Na+/H+ ion antiporter subunit BSQ44_09080 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BSQ44_09085 PF03334 Na+/H+ antiporter subunit BSQ44_09090 PF05443 ROS/MUCR transcriptional regulator protein BSQ44_09100 PF11638 DnaA N-terminal domain BSQ44_09100 PF08299 Bacterial dnaA protein helix-turn-helix BSQ44_09100 PF00308 Bacterial dnaA protein BSQ44_09110 PF02657 Fe-S metabolism associated domain BSQ44_09115 PF17264 Family of unknown function (DUF5330) BSQ44_09120 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_09125 PF01471 Putative peptidoglycan binding domain BSQ44_09125 PF10128 Glucose-6-phosphate dehydrogenase subunit BSQ44_09160 PF00912 Transglycosylase BSQ44_09160 PF00905 Penicillin binding protein transpeptidase domain BSQ44_09200 PF00486 Transcriptional regulatory protein, C terminal BSQ44_09200 PF00072 Response regulator receiver domain BSQ44_09205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_09220 PF03100 CcmE BSQ44_09225 PF01578 Cytochrome C assembly protein BSQ44_09225 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BSQ44_09230 PF03918 Cytochrome C biogenesis protein BSQ44_09240 PF13180 PDZ domain BSQ44_09245 PF00072 Response regulator receiver domain BSQ44_09245 PF00486 Transcriptional regulatory protein, C terminal BSQ44_09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_09250 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_09250 PF00672 HAMP domain BSQ44_09255 PF08335 GlnD PII-uridylyltransferase BSQ44_09255 PF03710 Glutamate-ammonia ligase adenylyltransferase BSQ44_09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_09260 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_09260 PF00989 PAS fold BSQ44_09265 PF01433 Peptidase family M1 domain BSQ44_09265 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BSQ44_09265 PF11940 Domain of unknown function (DUF3458) Ig-like fold BSQ44_09270 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_09270 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_09295 PF02798 Glutathione S-transferase, N-terminal domain BSQ44_09340 PF01048 Phosphorylase superfamily BSQ44_09340 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BSQ44_09360 PF02785 Biotin carboxylase C-terminal domain BSQ44_09360 PF00289 Biotin carboxylase, N-terminal domain BSQ44_09360 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSQ44_09360 PF00364 Biotin-requiring enzyme BSQ44_09370 PF12697 Alpha/beta hydrolase family BSQ44_09390 PF01039 Carboxyl transferase domain BSQ44_09395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_09395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_09395 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_09400 PF00440 Bacterial regulatory proteins, tetR family BSQ44_09405 PF00155 Aminotransferase class I and II BSQ44_09410 PF00144 Beta-lactamase BSQ44_09415 PF02530 Porin subfamily BSQ44_09420 PF02530 Porin subfamily BSQ44_09425 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_09440 PF07171 MlrC C-terminus BSQ44_09440 PF07364 Metallopeptidase family M81 BSQ44_09445 PF00561 alpha/beta hydrolase fold BSQ44_09450 PF02423 Ornithine cyclodeaminase/mu-crystallin family BSQ44_09455 PF01738 Dienelactone hydrolase family BSQ44_09455 PF00156 Phosphoribosyl transferase domain BSQ44_09485 PF07702 UTRA domain BSQ44_09485 PF00392 Bacterial regulatory proteins, gntR family BSQ44_09495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_09515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_09515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_09520 PF00694 Aconitase C-terminal domain BSQ44_09525 PF00330 Aconitase family (aconitate hydratase) BSQ44_09530 PF00171 Aldehyde dehydrogenase family BSQ44_09535 PF05199 GMC oxidoreductase BSQ44_09535 PF00732 GMC oxidoreductase BSQ44_09540 PF04909 Amidohydrolase BSQ44_09555 PF00732 GMC oxidoreductase BSQ44_09555 PF05199 GMC oxidoreductase BSQ44_09560 PF01842 ACT domain BSQ44_09560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_09560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_09565 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_09570 PF00005 ABC transporter BSQ44_09580 PF02653 Branched-chain amino acid transport system / permease component BSQ44_09590 PF00005 ABC transporter BSQ44_09590 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_09605 PF01872 RibD C-terminal domain BSQ44_09610 PF03466 LysR substrate binding domain BSQ44_09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_09625 PF02515 CoA-transferase family III BSQ44_09630 PF13607 Succinyl-CoA ligase like flavodoxin domain BSQ44_09630 PF13380 CoA binding domain BSQ44_09635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_09635 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_09635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_09640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_09640 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_09640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_09650 PF00561 alpha/beta hydrolase fold BSQ44_09655 PF01613 Flavin reductase like domain BSQ44_09660 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_09660 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_09680 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_09685 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_09685 PF00107 Zinc-binding dehydrogenase BSQ44_09690 PF01575 MaoC like domain BSQ44_09695 PF00501 AMP-binding enzyme BSQ44_09695 PF13193 AMP-binding enzyme C-terminal domain BSQ44_09705 PF01575 MaoC like domain BSQ44_09710 PF05681 Fumarate hydratase (Fumerase) BSQ44_09710 PF05683 Fumarase C-terminus BSQ44_09715 PF05681 Fumarate hydratase (Fumerase) BSQ44_09720 PF02615 Malate/L-lactate dehydrogenase BSQ44_09725 PF00171 Aldehyde dehydrogenase family BSQ44_09745 PF00005 ABC transporter BSQ44_09750 PF12704 MacB-like periplasmic core domain BSQ44_09750 PF02687 FtsX-like permease family BSQ44_09760 PF00850 Histone deacetylase domain BSQ44_09765 PF00583 Acetyltransferase (GNAT) family BSQ44_09775 PF00202 Aminotransferase class-III BSQ44_09785 PF00005 ABC transporter BSQ44_09790 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_09795 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_09800 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_09805 PF03466 LysR substrate binding domain BSQ44_09815 PF13361 UvrD-like helicase C-terminal domain BSQ44_09815 PF00580 UvrD/REP helicase N-terminal domain BSQ44_09820 PF00171 Aldehyde dehydrogenase family BSQ44_09825 PF03328 HpcH/HpaI aldolase/citrate lyase family BSQ44_09835 PF02653 Branched-chain amino acid transport system / permease component BSQ44_09840 PF00005 ABC transporter BSQ44_09845 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_09845 PF00005 ABC transporter BSQ44_09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_09855 PF03466 LysR substrate binding domain BSQ44_09860 PF02515 CoA-transferase family III BSQ44_09890 PF01527 Transposase BSQ44_09895 PF00665 Integrase core domain BSQ44_09895 PF13276 HTH-like domain BSQ44_09895 PF13333 Integrase core domain BSQ44_09900 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_09915 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_09925 PF01494 FAD binding domain BSQ44_09935 PF00456 Transketolase, thiamine diphosphate binding domain BSQ44_09935 PF17831 Pyruvate dehydrogenase E1 component middle domain BSQ44_09940 PF01037 Lrp/AsnC ligand binding domain BSQ44_09945 PF01614 Bacterial transcriptional regulator BSQ44_09945 PF09339 IclR helix-turn-helix domain BSQ44_09950 PF01494 FAD binding domain BSQ44_09960 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_09960 PF00107 Zinc-binding dehydrogenase BSQ44_09965 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_09970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_09980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_09985 PF02371 Transposase IS116/IS110/IS902 family BSQ44_09985 PF01548 Transposase BSQ44_09990 PF00171 Aldehyde dehydrogenase family BSQ44_09995 PF00005 ABC transporter BSQ44_09995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_10010 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_10010 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_10015 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_10020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_10035 PF00561 alpha/beta hydrolase fold BSQ44_10045 PF00248 Aldo/keto reductase family BSQ44_10050 PF00392 Bacterial regulatory proteins, gntR family BSQ44_10050 PF07702 UTRA domain BSQ44_10055 PF12697 Alpha/beta hydrolase family BSQ44_10065 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_10070 PF00005 ABC transporter BSQ44_10075 PF03358 NADPH-dependent FMN reductase BSQ44_10080 PF00296 Luciferase-like monooxygenase BSQ44_10090 PF01613 Flavin reductase like domain BSQ44_10115 PF00440 Bacterial regulatory proteins, tetR family BSQ44_10120 PF01494 FAD binding domain BSQ44_10125 PF00005 ABC transporter BSQ44_10135 PF02653 Branched-chain amino acid transport system / permease component BSQ44_10165 PF01464 Transglycosylase SLT domain BSQ44_10165 PF14718 Soluble lytic murein transglycosylase L domain BSQ44_10170 PF00701 Dihydrodipicolinate synthetase family BSQ44_10175 PF01668 SmpB protein BSQ44_10225 PF03167 Uracil DNA glycosylase superfamily BSQ44_10235 PF01192 RNA polymerase Rpb6 BSQ44_10240 PF13291 ACT domain BSQ44_10240 PF02824 TGS domain BSQ44_10240 PF04607 Region found in RelA / SpoT proteins BSQ44_10250 PF01648 4'-phosphopantetheinyl transferase superfamily BSQ44_10255 PF10502 Signal peptidase, peptidase S26 BSQ44_10260 PF00035 Double-stranded RNA binding motif BSQ44_10260 PF14622 Ribonuclease-III-like BSQ44_10270 PF00583 Acetyltransferase (GNAT) family BSQ44_10270 PF01047 MarR family BSQ44_10280 PF02565 Recombination protein O C terminal BSQ44_10280 PF11967 Recombination protein O N terminal BSQ44_10305 PF00924 Mechanosensitive ion channel BSQ44_10305 PF05552 Conserved TM helix BSQ44_10315 PF18030 RimK PreATP-grasp domain BSQ44_10315 PF08443 RimK-like ATP-grasp domain BSQ44_10320 PF03776 Septum formation topological specificity factor MinE BSQ44_10325 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BSQ44_10330 PF03775 Septum formation inhibitor MinC, C-terminal domain BSQ44_10340 PF01966 HD domain BSQ44_10345 PF01571 Aminomethyltransferase folate-binding domain BSQ44_10365 PF09297 NADH pyrophosphatase zinc ribbon domain BSQ44_10365 PF00293 NUDIX domain BSQ44_10370 PF02586 SOS response associated peptidase (SRAP) BSQ44_10375 PF01406 tRNA synthetases class I (C) catalytic domain BSQ44_10380 PF04480 Protein of unknown function (DUF559) BSQ44_10390 PF00561 alpha/beta hydrolase fold BSQ44_10395 PF00682 HMGL-like BSQ44_10395 PF08502 LeuA allosteric (dimerisation) domain BSQ44_10400 PF00892 EamA-like transporter family BSQ44_10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_10415 PF03466 LysR substrate binding domain BSQ44_10430 PF16867 Dimethlysulfonioproprionate lyase BSQ44_10435 PF00486 Transcriptional regulatory protein, C terminal BSQ44_10445 PF03641 Possible lysine decarboxylase BSQ44_10460 PF00664 ABC transporter transmembrane region BSQ44_10460 PF00005 ABC transporter BSQ44_10470 PF13426 PAS domain BSQ44_10470 PF08447 PAS fold BSQ44_10470 PF07536 HWE histidine kinase BSQ44_10475 PF07689 KaiB domain BSQ44_10480 PF06745 KaiC BSQ44_10485 PF02666 Phosphatidylserine decarboxylase BSQ44_10490 PF01066 CDP-alcohol phosphatidyltransferase BSQ44_10500 PF01042 Endoribonuclease L-PSP BSQ44_10505 PF00753 Metallo-beta-lactamase superfamily BSQ44_10515 PF01022 Bacterial regulatory protein, arsR family BSQ44_10525 PF02683 Cytochrome C biogenesis protein transmembrane region BSQ44_10560 PF00174 Oxidoreductase molybdopterin binding domain BSQ44_10565 PF00034 Cytochrome c BSQ44_10570 PF04143 Sulphur transport BSQ44_10575 PF00106 short chain dehydrogenase BSQ44_10580 PF00893 Small Multidrug Resistance protein BSQ44_10585 PF13537 Glutamine amidotransferase domain BSQ44_10585 PF00156 Phosphoribosyl transferase domain BSQ44_10595 PF18073 Rubredoxin metal binding domain BSQ44_10595 PF06745 KaiC BSQ44_10600 PF00842 Alanine racemase, C-terminal domain BSQ44_10600 PF01168 Alanine racemase, N-terminal domain BSQ44_10605 PF00772 DnaB-like helicase N terminal domain BSQ44_10605 PF03796 DnaB-like helicase C terminal domain BSQ44_10615 PF01281 Ribosomal protein L9, N-terminal domain BSQ44_10615 PF03948 Ribosomal protein L9, C-terminal domain BSQ44_10620 PF01084 Ribosomal protein S18 BSQ44_10625 PF01250 Ribosomal protein S6 BSQ44_10630 PF01699 Sodium/calcium exchanger protein BSQ44_10635 PF07687 Peptidase dimerisation domain BSQ44_10635 PF01546 Peptidase family M20/M25/M40 BSQ44_10640 PF00698 Acyl transferase domain BSQ44_10650 PF00550 Phosphopantetheine attachment site BSQ44_10655 PF00109 Beta-ketoacyl synthase, N-terminal domain BSQ44_10655 PF02801 Beta-ketoacyl synthase, C-terminal domain BSQ44_10660 PF02618 YceG-like family BSQ44_10665 PF08340 Domain of unknown function (DUF1732) BSQ44_10665 PF03755 YicC-like family, N-terminal region BSQ44_10670 PF00625 Guanylate kinase BSQ44_10675 PF00398 Ribosomal RNA adenine dimethylase BSQ44_10680 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BSQ44_10705 PF00883 Cytosol aminopeptidase family, catalytic domain BSQ44_10705 PF02789 Cytosol aminopeptidase family, N-terminal domain BSQ44_10720 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_10725 PF00005 ABC transporter BSQ44_10725 PF12848 ABC transporter BSQ44_10745 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_10750 PF00334 Nucleoside diphosphate kinase BSQ44_10760 PF02391 MoaE protein BSQ44_10770 PF01066 CDP-alcohol phosphatidyltransferase BSQ44_10775 PF02151 UvrB/uvrC motif BSQ44_10775 PF08459 UvrC Helix-hairpin-helix N-terminal BSQ44_10775 PF01541 GIY-YIG catalytic domain BSQ44_10790 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_10790 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_10805 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BSQ44_10810 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSQ44_10810 PF00384 Molybdopterin oxidoreductase BSQ44_10810 PF01568 Molydopterin dinucleotide binding domain BSQ44_10815 PF00551 Formyl transferase BSQ44_10820 PF00586 AIR synthase related protein, N-terminal domain BSQ44_10820 PF02769 AIR synthase related protein, C-terminal domain BSQ44_10825 PF01066 CDP-alcohol phosphatidyltransferase BSQ44_10830 PF01594 AI-2E family transporter BSQ44_10860 PF00483 Nucleotidyl transferase BSQ44_10865 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BSQ44_10870 PF16363 GDP-mannose 4,6 dehydratase BSQ44_10875 PF04321 RmlD substrate binding domain BSQ44_10890 PF01527 Transposase BSQ44_10910 PF03544 Gram-negative bacterial TonB protein C-terminal BSQ44_10925 PF01618 MotA/TolQ/ExbB proton channel family BSQ44_10935 PF07715 TonB-dependent Receptor Plug Domain BSQ44_10935 PF00593 TonB dependent receptor BSQ44_10945 PF05171 Haemin-degrading HemS.ChuX domain BSQ44_10950 PF01497 Periplasmic binding protein BSQ44_10955 PF01032 FecCD transport family BSQ44_10960 PF00005 ABC transporter BSQ44_10970 PF02397 Bacterial sugar transferase BSQ44_10975 PF13439 Glycosyltransferase Family 4 BSQ44_10975 PF00534 Glycosyl transferases group 1 BSQ44_11005 PF02628 Cytochrome oxidase assembly protein BSQ44_11015 PF01118 Semialdehyde dehydrogenase, NAD binding domain BSQ44_11020 PF00491 Arginase family BSQ44_11030 PF00380 Ribosomal protein S9/S16 BSQ44_11035 PF00572 Ribosomal protein L13 BSQ44_11045 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_11050 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_11070 PF13380 CoA binding domain BSQ44_11075 PF12833 Helix-turn-helix domain BSQ44_11080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BSQ44_11085 PF01053 Cys/Met metabolism PLP-dependent enzyme BSQ44_11095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_11095 PF03466 LysR substrate binding domain BSQ44_11100 PF00216 Bacterial DNA-binding protein BSQ44_11105 PF05362 Lon protease (S16) C-terminal proteolytic domain BSQ44_11105 PF02190 ATP-dependent protease La (LON) substrate-binding domain BSQ44_11105 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_11110 PF07724 AAA domain (Cdc48 subfamily) BSQ44_11110 PF10431 C-terminal, D2-small domain, of ClpB protein BSQ44_11110 PF06689 ClpX C4-type zinc finger BSQ44_11115 PF00574 Clp protease BSQ44_11120 PF01266 FAD dependent oxidoreductase BSQ44_11120 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BSQ44_11125 PF00067 Cytochrome P450 BSQ44_11135 PF00037 4Fe-4S binding domain BSQ44_11135 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BSQ44_11135 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BSQ44_11145 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSQ44_11145 PF00384 Molybdopterin oxidoreductase BSQ44_11145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSQ44_11145 PF01568 Molydopterin dinucleotide binding domain BSQ44_11145 PF00037 4Fe-4S binding domain BSQ44_11150 PF02634 FdhD/NarQ family BSQ44_11170 PF13426 PAS domain BSQ44_11170 PF07536 HWE histidine kinase BSQ44_11170 PF08447 PAS fold BSQ44_11180 PF08446 PAS fold BSQ44_11180 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_11180 PF00360 Phytochrome region BSQ44_11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_11180 PF01590 GAF domain BSQ44_11185 PF00072 Response regulator receiver domain BSQ44_11190 PF08447 PAS fold BSQ44_11190 PF07536 HWE histidine kinase BSQ44_11190 PF13426 PAS domain BSQ44_11195 PF00072 Response regulator receiver domain BSQ44_11195 PF00486 Transcriptional regulatory protein, C terminal BSQ44_11200 PF01928 CYTH domain BSQ44_11210 PF01037 Lrp/AsnC ligand binding domain BSQ44_11225 PF07690 Major Facilitator Superfamily BSQ44_11230 PF00271 Helicase conserved C-terminal domain BSQ44_11230 PF00270 DEAD/DEAH box helicase BSQ44_11230 PF03880 DbpA RNA binding domain BSQ44_11240 PF01513 ATP-NAD kinase BSQ44_11250 PF00355 Rieske [2Fe-2S] domain BSQ44_11255 PF00970 Oxidoreductase FAD-binding domain BSQ44_11255 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_11260 PF13458 Periplasmic binding protein BSQ44_11275 PF00005 ABC transporter BSQ44_11280 PF00005 ABC transporter BSQ44_11285 PF07859 alpha/beta hydrolase fold BSQ44_11305 PF07687 Peptidase dimerisation domain BSQ44_11305 PF01546 Peptidase family M20/M25/M40 BSQ44_11315 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_11315 PF01968 Hydantoinase/oxoprolinase BSQ44_11320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_11325 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_11330 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_11330 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_11335 PF00005 ABC transporter BSQ44_11335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_11340 PF00005 ABC transporter BSQ44_11340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_11345 PF01266 FAD dependent oxidoreductase BSQ44_11350 PF08032 RNA 2'-O ribose methyltransferase substrate binding BSQ44_11350 PF00588 SpoU rRNA Methylase family BSQ44_11370 PF03143 Elongation factor Tu C-terminal domain BSQ44_11370 PF00009 Elongation factor Tu GTP binding domain BSQ44_11370 PF03144 Elongation factor Tu domain 2 BSQ44_11415 PF02321 Outer membrane efflux protein BSQ44_11425 PF08264 Anticodon-binding domain of tRNA BSQ44_11425 PF00133 tRNA synthetases class I (I, L, M and V) BSQ44_11425 PF10458 Valyl tRNA synthetase tRNA binding arm BSQ44_11430 PF03741 Integral membrane protein TerC family BSQ44_11435 PF08238 Sel1 repeat BSQ44_11445 PF03372 Endonuclease/Exonuclease/phosphatase family BSQ44_11450 PF01381 Helix-turn-helix BSQ44_11455 PF05973 Phage derived protein Gp49-like (DUF891) BSQ44_11460 PF00120 Glutamine synthetase, catalytic domain BSQ44_11460 PF03951 Glutamine synthetase, beta-Grasp domain BSQ44_11465 PF00543 Nitrogen regulatory protein P-II BSQ44_11470 PF03853 YjeF-related protein N-terminus BSQ44_11470 PF01256 Carbohydrate kinase BSQ44_11480 PF00756 Putative esterase BSQ44_11485 PF07087 Protein of unknown function (DUF1353) BSQ44_11490 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BSQ44_11495 PF01717 Cobalamin-independent synthase, Catalytic domain BSQ44_11495 PF08267 Cobalamin-independent synthase, N-terminal domain BSQ44_11510 PF00574 Clp protease BSQ44_11515 PF00107 Zinc-binding dehydrogenase BSQ44_11515 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_11530 PF01183 Glycosyl hydrolases family 25 BSQ44_11535 PF04909 Amidohydrolase BSQ44_11550 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_11555 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_11555 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_11560 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_11560 PF01799 [2Fe-2S] binding domain BSQ44_11575 PF02311 AraC-like ligand binding domain BSQ44_11575 PF12833 Helix-turn-helix domain BSQ44_11580 PF00356 Bacterial regulatory proteins, lacI family BSQ44_11590 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_11595 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_11610 PF17912 MalK OB fold domain BSQ44_11610 PF03459 TOBE domain BSQ44_11610 PF00005 ABC transporter BSQ44_11615 PF00005 ABC transporter BSQ44_11615 PF08402 TOBE domain BSQ44_11620 PF02733 Dak1 domain BSQ44_11620 PF02734 DAK2 domain BSQ44_11630 PF08471 Class II vitamin B12-dependent ribonucleotide reductase BSQ44_11630 PF02867 Ribonucleotide reductase, barrel domain BSQ44_11635 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_11640 PF06426 Serine acetyltransferase, N-terminal BSQ44_11640 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_11660 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_11685 PF00571 CBS domain BSQ44_11690 PF00106 short chain dehydrogenase BSQ44_11695 PF12852 Cupin BSQ44_11695 PF12833 Helix-turn-helix domain BSQ44_11705 PF02934 GatB/GatE catalytic domain BSQ44_11705 PF02637 GatB domain BSQ44_11725 PF00583 Acetyltransferase (GNAT) family BSQ44_11745 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BSQ44_11750 PF02785 Biotin carboxylase C-terminal domain BSQ44_11750 PF00289 Biotin carboxylase, N-terminal domain BSQ44_11750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSQ44_11755 PF00364 Biotin-requiring enzyme BSQ44_11770 PF00155 Aminotransferase class I and II BSQ44_11775 PF04960 Glutaminase BSQ44_11780 PF12111 Polyribonucleotide phosphorylase C terminal BSQ44_11780 PF10150 Ribonuclease E/G family BSQ44_11780 PF00575 S1 RNA binding domain BSQ44_11785 PF01520 N-acetylmuramoyl-L-alanine amidase BSQ44_11785 PF11741 AMIN domain BSQ44_11790 PF17092 Penicillin-binding protein OB-like domain BSQ44_11790 PF00905 Penicillin binding protein transpeptidase domain BSQ44_11790 PF00912 Transglycosylase BSQ44_11795 PF03462 PCRF domain BSQ44_11795 PF00472 RF-1 domain BSQ44_11800 PF01551 Peptidase family M23 BSQ44_11800 PF08525 Opacity-associated protein A N-terminal motif BSQ44_11800 PF01476 LysM domain BSQ44_11805 PF04305 Protein of unknown function (DUF455) BSQ44_11810 PF00578 AhpC/TSA family BSQ44_11820 PF00579 tRNA synthetases class I (W and Y) BSQ44_11825 PF03702 Anhydro-N-acetylmuramic acid kinase BSQ44_11830 PF04299 Putative FMN-binding domain BSQ44_11835 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BSQ44_11840 PF00266 Aminotransferase class-V BSQ44_11845 PF01458 Uncharacterized protein family (UPF0051) BSQ44_11855 PF00005 ABC transporter BSQ44_11860 PF01458 Uncharacterized protein family (UPF0051) BSQ44_11865 PF00266 Aminotransferase class-V BSQ44_11870 PF01883 Iron-sulfur cluster assembly protein BSQ44_11880 PF04002 RadC-like JAB domain BSQ44_11885 PF00557 Metallopeptidase family M24 BSQ44_11910 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BSQ44_11910 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BSQ44_11915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_11920 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_11925 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_11925 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_11930 PF00005 ABC transporter BSQ44_11930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_11935 PF02690 Na+/Pi-cotransporter BSQ44_11955 PF01914 MarC family integral membrane protein BSQ44_11960 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_11975 PF00873 AcrB/AcrD/AcrF family BSQ44_11980 PF01042 Endoribonuclease L-PSP BSQ44_11985 PF00005 ABC transporter BSQ44_11995 PF00005 ABC transporter BSQ44_11995 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_12005 PF02653 Branched-chain amino acid transport system / permease component BSQ44_12015 PF03301 Tryptophan 2,3-dioxygenase BSQ44_12020 PF00266 Aminotransferase class-V BSQ44_12025 PF13193 AMP-binding enzyme C-terminal domain BSQ44_12025 PF00501 AMP-binding enzyme BSQ44_12035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_12035 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_12035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_12040 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_12050 PF00106 short chain dehydrogenase BSQ44_12055 PF01494 FAD binding domain BSQ44_12060 PF00120 Glutamine synthetase, catalytic domain BSQ44_12070 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BSQ44_12080 PF09335 SNARE associated Golgi protein BSQ44_12090 PF00580 UvrD/REP helicase N-terminal domain BSQ44_12090 PF13361 UvrD-like helicase C-terminal domain BSQ44_12095 PF01757 Acyltransferase family BSQ44_12100 PF00872 Transposase, Mutator family BSQ44_12115 PF13358 DDE superfamily endonuclease BSQ44_12135 PF02347 Glycine cleavage system P-protein BSQ44_12140 PF01597 Glycine cleavage H-protein BSQ44_12145 PF01571 Aminomethyltransferase folate-binding domain BSQ44_12145 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_12155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSQ44_12155 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BSQ44_12155 PF02142 MGS-like domain BSQ44_12180 PF04228 Putative neutral zinc metallopeptidase BSQ44_12190 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BSQ44_12190 PF00117 Glutamine amidotransferase class-I BSQ44_12200 PF01207 Dihydrouridine synthase (Dus) BSQ44_12205 PF00672 HAMP domain BSQ44_12205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_12210 PF01925 Sulfite exporter TauE/SafE BSQ44_12225 PF02277 Phosphoribosyltransferase BSQ44_12230 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_12230 PF00989 PAS fold BSQ44_12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_12235 PF02798 Glutathione S-transferase, N-terminal domain BSQ44_12235 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_12240 PF03167 Uracil DNA glycosylase superfamily BSQ44_12245 PF01037 Lrp/AsnC ligand binding domain BSQ44_12265 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSQ44_12265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_12270 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_12275 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_12280 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_12290 PF07690 Major Facilitator Superfamily BSQ44_12305 PF04055 Radical SAM superfamily BSQ44_12305 PF06463 Molybdenum Cofactor Synthesis C BSQ44_12320 PF00067 Cytochrome P450 BSQ44_12340 PF02683 Cytochrome C biogenesis protein transmembrane region BSQ44_12345 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_12345 PF12804 MobA-like NTP transferase domain BSQ44_12350 PF01380 SIS domain BSQ44_12360 PF00271 Helicase conserved C-terminal domain BSQ44_12360 PF00270 DEAD/DEAH box helicase BSQ44_12360 PF17191 RecG wedge domain BSQ44_12370 PF03461 TRCF domain BSQ44_12370 PF00271 Helicase conserved C-terminal domain BSQ44_12370 PF00270 DEAD/DEAH box helicase BSQ44_12370 PF17757 UvrB interaction domain BSQ44_12370 PF02559 CarD-like/TRCF domain BSQ44_12380 PF00072 Response regulator receiver domain BSQ44_12385 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_12385 PF00072 Response regulator receiver domain BSQ44_12390 PF00471 Ribosomal protein L33 BSQ44_12410 PF00575 S1 RNA binding domain BSQ44_12410 PF00773 RNB domain BSQ44_12410 PF08206 Ribonuclease B OB domain BSQ44_12410 PF08461 Ribonuclease R winged-helix domain BSQ44_12410 PF17876 Cold shock domain BSQ44_12415 PF13368 Topoisomerase C-terminal repeat BSQ44_12415 PF01751 Toprim domain BSQ44_12415 PF01131 DNA topoisomerase BSQ44_12415 PF01396 Topoisomerase DNA binding C4 zinc finger BSQ44_12435 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BSQ44_12440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BSQ44_12445 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BSQ44_12455 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BSQ44_12470 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BSQ44_12470 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BSQ44_12470 PF10531 SLBB domain BSQ44_12485 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BSQ44_12485 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BSQ44_12485 PF00384 Molybdopterin oxidoreductase BSQ44_12490 PF00146 NADH dehydrogenase BSQ44_12500 PF12838 4Fe-4S dicluster domain BSQ44_12505 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BSQ44_12510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BSQ44_12515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSQ44_12515 PF00361 Proton-conducting membrane transporter BSQ44_12520 PF00361 Proton-conducting membrane transporter BSQ44_12520 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BSQ44_12525 PF00361 Proton-conducting membrane transporter BSQ44_12530 PF03099 Biotin/lipoate A/B protein ligase family BSQ44_12530 PF02237 Biotin protein ligase C terminal domain BSQ44_12535 PF17770 Ribonuclease J C-terminal domain BSQ44_12535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BSQ44_12535 PF12706 Beta-lactamase superfamily domain BSQ44_12550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSQ44_12550 PF03129 Anticodon binding domain BSQ44_12555 PF12704 MacB-like periplasmic core domain BSQ44_12555 PF02687 FtsX-like permease family BSQ44_12560 PF00005 ABC transporter BSQ44_12570 PF03099 Biotin/lipoate A/B protein ligase family BSQ44_12595 PF01769 Divalent cation transporter BSQ44_12595 PF00571 CBS domain BSQ44_12595 PF03448 MgtE intracellular N domain BSQ44_12605 PF09278 MerR, DNA binding BSQ44_12605 PF00376 MerR family regulatory protein BSQ44_12610 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BSQ44_12625 PF00248 Aldo/keto reductase family BSQ44_12640 PF00355 Rieske [2Fe-2S] domain BSQ44_12640 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BSQ44_12650 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_12655 PF00106 short chain dehydrogenase BSQ44_12670 PF13378 Enolase C-terminal domain-like BSQ44_12670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_12675 PF02405 Permease MlaE BSQ44_12680 PF00005 ABC transporter BSQ44_12710 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_12715 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_12725 PF00809 Pterin binding enzyme BSQ44_12730 PF02152 Dihydroneopterin aldolase BSQ44_12735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BSQ44_12745 PF05128 Domain of unknown function (DUF697) BSQ44_12750 PF04317 YcjX-like family, DUF463 BSQ44_12760 PF01258 Prokaryotic dksA/traR C4-type zinc finger BSQ44_12770 PF00072 Response regulator receiver domain BSQ44_12770 PF13188 PAS domain BSQ44_12770 PF08448 PAS fold BSQ44_12770 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_12775 PF01048 Phosphorylase superfamily BSQ44_12780 PF02954 Bacterial regulatory protein, Fis family BSQ44_12780 PF00158 Sigma-54 interaction domain BSQ44_12780 PF13188 PAS domain BSQ44_12785 PF02653 Branched-chain amino acid transport system / permease component BSQ44_12795 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_12795 PF00005 ABC transporter BSQ44_12800 PF00005 ABC transporter BSQ44_12815 PF00950 ABC 3 transport family BSQ44_12820 PF00950 ABC 3 transport family BSQ44_12830 PF01297 Zinc-uptake complex component A periplasmic BSQ44_12835 PF01475 Ferric uptake regulator family BSQ44_12840 PF13488 Glycine zipper BSQ44_12840 PF00691 OmpA family BSQ44_12845 PF05922 Peptidase inhibitor I9 BSQ44_12845 PF00082 Subtilase family BSQ44_12855 PF13360 PQQ-like domain BSQ44_12865 PF07702 UTRA domain BSQ44_12865 PF00392 Bacterial regulatory proteins, gntR family BSQ44_12870 PF08666 SAF domain BSQ44_12875 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BSQ44_12890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_12890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_12895 PF02615 Malate/L-lactate dehydrogenase BSQ44_12900 PF00171 Aldehyde dehydrogenase family BSQ44_12910 PF00294 pfkB family carbohydrate kinase BSQ44_12920 PF00034 Cytochrome c BSQ44_12920 PF03150 Di-haem cytochrome c peroxidase BSQ44_12930 PF01037 Lrp/AsnC ligand binding domain BSQ44_12935 PF14850 DNA-binding domain of Proline dehydrogenase BSQ44_12935 PF01619 Proline dehydrogenase BSQ44_12935 PF00171 Aldehyde dehydrogenase family BSQ44_12935 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BSQ44_12955 PF02082 Transcriptional regulator BSQ44_12975 PF00440 Bacterial regulatory proteins, tetR family BSQ44_12990 PF04909 Amidohydrolase BSQ44_12995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_13000 PF02585 GlcNAc-PI de-N-acetylase BSQ44_13005 PF03737 Aldolase/RraA BSQ44_13010 PF04303 PrpF protein BSQ44_13025 PF00521 DNA gyrase/topoisomerase IV, subunit A BSQ44_13025 PF03989 DNA gyrase C-terminal domain, beta-propeller BSQ44_13030 PF01467 Cytidylyltransferase-like BSQ44_13035 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BSQ44_13040 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BSQ44_13050 PF02547 Queuosine biosynthesis protein BSQ44_13055 PF04828 Glutathione-dependent formaldehyde-activating enzyme BSQ44_13060 PF01702 Queuine tRNA-ribosyltransferase BSQ44_13070 PF14403 Circularly permuted ATP-grasp type 2 BSQ44_13080 PF04168 A predicted alpha-helical domain with a conserved ER motif. BSQ44_13080 PF14403 Circularly permuted ATP-grasp type 2 BSQ44_13095 PF01047 MarR family BSQ44_13105 PF08220 DeoR-like helix-turn-helix domain BSQ44_13105 PF00455 DeoR C terminal sensor domain BSQ44_13110 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BSQ44_13110 PF01266 FAD dependent oxidoreductase BSQ44_13115 PF00005 ABC transporter BSQ44_13115 PF17912 MalK OB fold domain BSQ44_13120 PF00005 ABC transporter BSQ44_13120 PF17912 MalK OB fold domain BSQ44_13125 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_13130 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_13145 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSQ44_13145 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSQ44_13150 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BSQ44_13150 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BSQ44_13155 PF01979 Amidohydrolase family BSQ44_13160 PF02660 Glycerol-3-phosphate acyltransferase BSQ44_13165 PF17782 DprA winged helix domain BSQ44_13165 PF02481 DNA recombination-mediator protein A BSQ44_13170 PF07886 BA14K-like protein BSQ44_13175 PF03951 Glutamine synthetase, beta-Grasp domain BSQ44_13175 PF00120 Glutamine synthetase, catalytic domain BSQ44_13185 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_13185 PF05230 MASE2 domain BSQ44_13200 PF01145 SPFH domain / Band 7 family BSQ44_13200 PF15975 Flotillin BSQ44_13210 PF02653 Branched-chain amino acid transport system / permease component BSQ44_13215 PF02653 Branched-chain amino acid transport system / permease component BSQ44_13220 PF00005 ABC transporter BSQ44_13220 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_13230 PF01425 Amidase BSQ44_13235 PF00501 AMP-binding enzyme BSQ44_13235 PF13193 AMP-binding enzyme C-terminal domain BSQ44_13245 PF02567 Phenazine biosynthesis-like protein BSQ44_13250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BSQ44_13255 PF12704 MacB-like periplasmic core domain BSQ44_13255 PF00005 ABC transporter BSQ44_13255 PF02687 FtsX-like permease family BSQ44_13260 PF02687 FtsX-like permease family BSQ44_13260 PF12704 MacB-like periplasmic core domain BSQ44_13260 PF00005 ABC transporter BSQ44_13265 PF00950 ABC 3 transport family BSQ44_13270 PF00005 ABC transporter BSQ44_13275 PF00817 impB/mucB/samB family BSQ44_13275 PF11799 impB/mucB/samB family C-terminal domain BSQ44_13295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_13305 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_13310 PF18496 Collagenase G catalytic helper subdomain BSQ44_13310 PF08453 Peptidase family M9 N-terminal BSQ44_13310 PF01752 Collagenase BSQ44_13315 PF18496 Collagenase G catalytic helper subdomain BSQ44_13315 PF01752 Collagenase BSQ44_13315 PF08453 Peptidase family M9 N-terminal BSQ44_13325 PF01521 Iron-sulphur cluster biosynthesis BSQ44_13330 PF13286 Phosphohydrolase-associated domain BSQ44_13330 PF01966 HD domain BSQ44_13335 PF00750 tRNA synthetases class I (R) BSQ44_13335 PF05746 DALR anticodon binding domain BSQ44_13335 PF03485 Arginyl tRNA synthetase N terminal domain BSQ44_13345 PF00933 Glycosyl hydrolase family 3 N terminal domain BSQ44_13350 PF02616 Segregation and condensation protein ScpA BSQ44_13355 PF04079 Segregation and condensation complex subunit ScpB BSQ44_13360 PF00005 ABC transporter BSQ44_13360 PF08402 TOBE domain BSQ44_13365 PF02416 mttA/Hcf106 family BSQ44_13370 PF02416 mttA/Hcf106 family BSQ44_13375 PF00902 Sec-independent protein translocase protein (TatC) BSQ44_13380 PF07690 Major Facilitator Superfamily BSQ44_13385 PF02311 AraC-like ligand binding domain BSQ44_13385 PF12833 Helix-turn-helix domain BSQ44_13390 PF04945 YHS domain BSQ44_13395 PF00376 MerR family regulatory protein BSQ44_13395 PF09278 MerR, DNA binding BSQ44_13410 PF03328 HpcH/HpaI aldolase/citrate lyase family BSQ44_13430 PF01738 Dienelactone hydrolase family BSQ44_13450 PF01565 FAD binding domain BSQ44_13450 PF02913 FAD linked oxidases, C-terminal domain BSQ44_13455 PF00672 HAMP domain BSQ44_13455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_13455 PF02203 Tar ligand binding domain homologue BSQ44_13460 PF01654 Cytochrome bd terminal oxidase subunit I BSQ44_13465 PF02322 Cytochrome bd terminal oxidase subunit II BSQ44_13495 PF00303 Thymidylate synthase BSQ44_13505 PF00186 Dihydrofolate reductase BSQ44_13510 PF01145 SPFH domain / Band 7 family BSQ44_13515 PF01145 SPFH domain / Band 7 family BSQ44_13525 PF13180 PDZ domain BSQ44_13530 PF13302 Acetyltransferase (GNAT) domain BSQ44_13545 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_13555 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_13555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_13555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_13565 PF10369 Small subunit of acetolactate synthase BSQ44_13570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_13570 PF01751 Toprim domain BSQ44_13570 PF00204 DNA gyrase B BSQ44_13570 PF00986 DNA gyrase B subunit, carboxyl terminus BSQ44_13580 PF13629 Pilus formation protein N terminal region BSQ44_13580 PF04972 BON domain BSQ44_13580 PF00263 Bacterial type II and III secretion system protein BSQ44_13595 PF00437 Type II/IV secretion system protein BSQ44_13615 PF01757 Acyltransferase family BSQ44_13620 PF04055 Radical SAM superfamily BSQ44_13620 PF00919 Uncharacterized protein family UPF0004 BSQ44_13620 PF18693 TRAM domain BSQ44_13630 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSQ44_13640 PF00390 Malic enzyme, N-terminal domain BSQ44_13640 PF03949 Malic enzyme, NAD binding domain BSQ44_13640 PF01515 Phosphate acetyl/butaryl transferase BSQ44_13655 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_13660 PF17755 UvrA DNA-binding domain BSQ44_13660 PF17760 UvrA interaction domain BSQ44_13665 PF00970 Oxidoreductase FAD-binding domain BSQ44_13665 PF00175 Oxidoreductase NAD-binding domain BSQ44_13670 PF01968 Hydantoinase/oxoprolinase BSQ44_13670 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_13685 PF00313 'Cold-shock' DNA-binding domain BSQ44_13695 PF00005 ABC transporter BSQ44_13695 PF13732 Domain of unknown function (DUF4162) BSQ44_13700 PF01061 ABC-2 type transporter BSQ44_13745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_13750 PF00459 Inositol monophosphatase family BSQ44_13755 PF00009 Elongation factor Tu GTP binding domain BSQ44_13760 PF01507 Phosphoadenosine phosphosulfate reductase family BSQ44_13790 PF01968 Hydantoinase/oxoprolinase BSQ44_13790 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_13795 PF02538 Hydantoinase B/oxoprolinase BSQ44_13810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_13815 PF01244 Membrane dipeptidase (Peptidase family M19) BSQ44_13820 PF00557 Metallopeptidase family M24 BSQ44_13835 PF03453 MoeA N-terminal region (domain I and II) BSQ44_13835 PF03454 MoeA C-terminal region (domain IV) BSQ44_13835 PF00994 Probable molybdopterin binding domain BSQ44_13840 PF01967 MoaC family BSQ44_13845 PF00218 Indole-3-glycerol phosphate synthase BSQ44_13850 PF02885 Glycosyl transferase family, helical bundle domain BSQ44_13850 PF00591 Glycosyl transferase family, a/b domain BSQ44_13860 PF00121 Triosephosphate isomerase BSQ44_13865 PF03840 Preprotein translocase SecG subunit BSQ44_13875 PF06418 CTP synthase N-terminus BSQ44_13875 PF00117 Glutamine amidotransferase class-I BSQ44_13885 PF00082 Subtilase family BSQ44_13885 PF05922 Peptidase inhibitor I9 BSQ44_13890 PF03330 Lytic transglycolase BSQ44_13890 PF05036 Sporulation related domain BSQ44_13895 PF07943 Penicillin-binding protein 5, C-terminal domain BSQ44_13895 PF00768 D-alanyl-D-alanine carboxypeptidase BSQ44_13900 PF02223 Thymidylate kinase BSQ44_13905 PF09115 DNA polymerase III, delta subunit, C terminal BSQ44_13910 PF09334 tRNA synthetases class I (M) BSQ44_13910 PF08264 Anticodon-binding domain of tRNA BSQ44_13915 PF01026 TatD related DNase BSQ44_13930 PF01557 Fumarylacetoacetate (FAA) hydrolase family BSQ44_13950 PF00005 ABC transporter BSQ44_13950 PF00664 ABC transporter transmembrane region BSQ44_13960 PF01894 Uncharacterised protein family UPF0047 BSQ44_13980 PF04545 Sigma-70, region 4 BSQ44_13980 PF04546 Sigma-70, non-essential region BSQ44_13980 PF04542 Sigma-70 region 2 BSQ44_13980 PF04539 Sigma-70 region 3 BSQ44_13980 PF00140 Sigma-70 factor, region 1.2 BSQ44_13980 PF03979 Sigma-70 factor, region 1.1 BSQ44_13985 PF10410 DnaB-helicase binding domain of primase BSQ44_13985 PF08278 DNA primase DnaG DnaB-binding BSQ44_13985 PF13662 Toprim domain BSQ44_13985 PF08275 DNA primase catalytic core, N-terminal domain BSQ44_13985 PF01807 CHC2 zinc finger BSQ44_13990 PF02608 ABC transporter substrate-binding protein PnrA-like BSQ44_13995 PF02653 Branched-chain amino acid transport system / permease component BSQ44_14005 PF00005 ABC transporter BSQ44_14010 PF00107 Zinc-binding dehydrogenase BSQ44_14010 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_14015 PF01066 CDP-alcohol phosphatidyltransferase BSQ44_14020 PF01494 FAD binding domain BSQ44_14025 PF03547 Membrane transport protein BSQ44_14040 PF02811 PHP domain BSQ44_14040 PF14579 Helix-hairpin-helix motif BSQ44_14040 PF07733 Bacterial DNA polymerase III alpha NTPase domain BSQ44_14040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BSQ44_14045 PF02785 Biotin carboxylase C-terminal domain BSQ44_14045 PF00289 Biotin carboxylase, N-terminal domain BSQ44_14045 PF00364 Biotin-requiring enzyme BSQ44_14045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BSQ44_14045 PF18140 Propionyl-coenzyme A carboxylase BT domain BSQ44_14055 PF00474 Sodium:solute symporter family BSQ44_14060 PF03734 L,D-transpeptidase catalytic domain BSQ44_14060 PF01471 Putative peptidoglycan binding domain BSQ44_14065 PF05681 Fumarate hydratase (Fumerase) BSQ44_14065 PF05683 Fumarase C-terminus BSQ44_14080 PF00561 alpha/beta hydrolase fold BSQ44_14085 PF01047 MarR family BSQ44_14090 PF00582 Universal stress protein family BSQ44_14095 PF00561 alpha/beta hydrolase fold BSQ44_14105 PF00313 'Cold-shock' DNA-binding domain BSQ44_14110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_14115 PF01039 Carboxyl transferase domain BSQ44_14125 PF01476 LysM domain BSQ44_14125 PF05257 CHAP domain BSQ44_14130 PF01425 Amidase BSQ44_14135 PF00248 Aldo/keto reductase family BSQ44_14160 PF12804 MobA-like NTP transferase domain BSQ44_14165 PF13478 XdhC Rossmann domain BSQ44_14165 PF02625 XdhC and CoxI family BSQ44_14185 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_14185 PF05362 Lon protease (S16) C-terminal proteolytic domain BSQ44_14185 PF02190 ATP-dependent protease La (LON) substrate-binding domain BSQ44_14190 PF01613 Flavin reductase like domain BSQ44_14200 PF03576 Peptidase family S58 BSQ44_14215 PF10397 Adenylosuccinate lyase C-terminus BSQ44_14215 PF00206 Lyase BSQ44_14225 PF03328 HpcH/HpaI aldolase/citrate lyase family BSQ44_14235 PF01259 SAICAR synthetase BSQ44_14240 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BSQ44_14260 PF00005 ABC transporter BSQ44_14265 PF02397 Bacterial sugar transferase BSQ44_14270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BSQ44_14270 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BSQ44_14270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BSQ44_14275 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BSQ44_14280 PF00501 AMP-binding enzyme BSQ44_14280 PF01370 NAD dependent epimerase/dehydratase family BSQ44_14280 PF00550 Phosphopantetheine attachment site BSQ44_14290 PF02719 Polysaccharide biosynthesis protein BSQ44_14295 PF02773 S-adenosylmethionine synthetase, C-terminal domain BSQ44_14295 PF00438 S-adenosylmethionine synthetase, N-terminal domain BSQ44_14295 PF02772 S-adenosylmethionine synthetase, central domain BSQ44_14310 PF01134 Glucose inhibited division protein A BSQ44_14320 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_14325 PF04116 Fatty acid hydroxylase superfamily BSQ44_14345 PF07549 SecD/SecF GG Motif BSQ44_14345 PF02355 Protein export membrane protein BSQ44_14350 PF02699 Preprotein translocase subunit BSQ44_14360 PF01476 LysM domain BSQ44_14360 PF01551 Peptidase family M23 BSQ44_14370 PF01975 Survival protein SurE BSQ44_14375 PF02403 Seryl-tRNA synthetase N-terminal domain BSQ44_14375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSQ44_14385 PF08032 RNA 2'-O ribose methyltransferase substrate binding BSQ44_14385 PF00588 SpoU rRNA Methylase family BSQ44_14390 PF00892 EamA-like transporter family BSQ44_14395 PF00005 ABC transporter BSQ44_14395 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_14400 PF00005 ABC transporter BSQ44_14420 PF01297 Zinc-uptake complex component A periplasmic BSQ44_14425 PF01474 Class-II DAHP synthetase family BSQ44_14440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_14440 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_14450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BSQ44_14455 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_14460 PF00313 'Cold-shock' DNA-binding domain BSQ44_14465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_14465 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSQ44_14470 PF00563 EAL domain BSQ44_14470 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_14470 PF03707 Bacterial signalling protein N terminal repeat BSQ44_14480 PF00155 Aminotransferase class I and II BSQ44_14495 PF03707 Bacterial signalling protein N terminal repeat BSQ44_14495 PF00563 EAL domain BSQ44_14495 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_14500 PF01738 Dienelactone hydrolase family BSQ44_14505 PF00009 Elongation factor Tu GTP binding domain BSQ44_14505 PF03764 Elongation factor G, domain IV BSQ44_14505 PF14492 Elongation Factor G, domain II BSQ44_14505 PF00679 Elongation factor G C-terminus BSQ44_14510 PF00293 NUDIX domain BSQ44_14515 PF01613 Flavin reductase like domain BSQ44_14535 PF03129 Anticodon binding domain BSQ44_14535 PF02824 TGS domain BSQ44_14535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BSQ44_14535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSQ44_14540 PF07411 Domain of unknown function (DUF1508) BSQ44_14545 PF01809 Putative membrane protein insertion efficiency factor BSQ44_14555 PF01227 GTP cyclohydrolase I BSQ44_14560 PF01502 Phosphoribosyl-AMP cyclohydrolase BSQ44_14565 PF01734 Patatin-like phospholipase BSQ44_14570 PF17768 RecJ OB domain BSQ44_14570 PF02272 DHHA1 domain BSQ44_14570 PF01368 DHH family BSQ44_14575 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BSQ44_14590 PF01842 ACT domain BSQ44_14590 PF00742 Homoserine dehydrogenase BSQ44_14590 PF03447 Homoserine dehydrogenase, NAD binding domain BSQ44_14595 PF00155 Aminotransferase class I and II BSQ44_14605 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus BSQ44_14620 PF01614 Bacterial transcriptional regulator BSQ44_14620 PF09339 IclR helix-turn-helix domain BSQ44_14625 PF00557 Metallopeptidase family M24 BSQ44_14625 PF01321 Creatinase/Prolidase N-terminal domain BSQ44_14630 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_14635 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_14645 PF00005 ABC transporter BSQ44_14645 PF08402 TOBE domain BSQ44_14655 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_14655 PF01968 Hydantoinase/oxoprolinase BSQ44_14670 PF00436 Single-strand binding protein family BSQ44_14690 PF03734 L,D-transpeptidase catalytic domain BSQ44_14690 PF01476 LysM domain BSQ44_14690 PF17969 L,D-transpeptidase C-terminal domain BSQ44_14695 PF00691 OmpA family BSQ44_14700 PF00717 Peptidase S24-like BSQ44_14700 PF01726 LexA DNA binding domain BSQ44_14710 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSQ44_14715 PF00285 Citrate synthase, C-terminal domain BSQ44_14720 PF02684 Lipid-A-disaccharide synthetase BSQ44_14725 PF06230 LpxI C-terminal domain BSQ44_14725 PF17930 LpxI N-terminal domain BSQ44_14730 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_14730 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BSQ44_14735 PF07977 FabA-like domain BSQ44_14740 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_14740 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BSQ44_14745 PF01103 Surface antigen BSQ44_14745 PF07244 Surface antigen variable number repeat BSQ44_14750 PF17820 PDZ domain BSQ44_14750 PF02163 Peptidase family M50 BSQ44_14760 PF01255 Putative undecaprenyl diphosphate synthase BSQ44_14765 PF01765 Ribosome recycling factor BSQ44_14770 PF00696 Amino acid kinase family BSQ44_14775 PF00889 Elongation factor TS BSQ44_14780 PF00318 Ribosomal protein S2 BSQ44_14810 PF00893 Small Multidrug Resistance protein BSQ44_14815 PF01230 HIT domain BSQ44_14830 PF07724 AAA domain (Cdc48 subfamily) BSQ44_14830 PF10431 C-terminal, D2-small domain, of ClpB protein BSQ44_14830 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_14830 PF02861 Clp amino terminal domain, pathogenicity island component BSQ44_14830 PF17871 AAA lid domain BSQ44_14835 PF02617 ATP-dependent Clp protease adaptor protein ClpS BSQ44_14845 PF07943 Penicillin-binding protein 5, C-terminal domain BSQ44_14845 PF00768 D-alanyl-D-alanine carboxypeptidase BSQ44_14850 PF01556 DnaJ C terminal domain BSQ44_14850 PF00226 DnaJ domain BSQ44_14850 PF00684 DnaJ central domain BSQ44_14860 PF13614 AAA domain BSQ44_14860 PF00376 MerR family regulatory protein BSQ44_14870 PF03315 Serine dehydratase beta chain BSQ44_14870 PF03313 Serine dehydratase alpha chain BSQ44_14890 PF13847 Methyltransferase domain BSQ44_14895 PF01425 Amidase BSQ44_14905 PF02686 Glu-tRNAGln amidotransferase C subunit BSQ44_14915 PF03652 Holliday junction resolvase BSQ44_14930 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_14930 PF18158 Adaptive response protein AidB N-terminal domain BSQ44_14930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_14940 PF00149 Calcineurin-like phosphoesterase BSQ44_14940 PF02872 5'-nucleotidase, C-terminal domain BSQ44_14945 PF12795 Mechanosensitive ion channel porin domain BSQ44_14945 PF12794 Mechanosensitive ion channel inner membrane domain 1 BSQ44_14945 PF00924 Mechanosensitive ion channel BSQ44_14950 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_14950 PF13188 PAS domain BSQ44_14950 PF03707 Bacterial signalling protein N terminal repeat BSQ44_14950 PF00563 EAL domain BSQ44_14955 PF01037 Lrp/AsnC ligand binding domain BSQ44_14960 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BSQ44_14960 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BSQ44_14975 PF00581 Rhodanese-like domain BSQ44_14980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSQ44_14980 PF01411 tRNA synthetases class II (A) BSQ44_14980 PF02272 DHHA1 domain BSQ44_14985 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_15000 PF02464 Competence-damaged protein BSQ44_15000 PF00994 Probable molybdopterin binding domain BSQ44_15005 PF03358 NADPH-dependent FMN reductase BSQ44_15015 PF00364 Biotin-requiring enzyme BSQ44_15015 PF00561 alpha/beta hydrolase fold BSQ44_15025 PF01425 Amidase BSQ44_15030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_15030 PF13378 Enolase C-terminal domain-like BSQ44_15035 PF00005 ABC transporter BSQ44_15045 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_15050 PF13378 Enolase C-terminal domain-like BSQ44_15050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_15090 PF12802 MarR family BSQ44_15105 PF00037 4Fe-4S binding domain BSQ44_15110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_15110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_15110 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_15110 PF01799 [2Fe-2S] binding domain BSQ44_15120 PF00857 Isochorismatase family BSQ44_15135 PF00005 ABC transporter BSQ44_15140 PF00005 ABC transporter BSQ44_15140 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_15150 PF02653 Branched-chain amino acid transport system / permease component BSQ44_15180 PF03819 MazG nucleotide pyrophosphohydrolase domain BSQ44_15185 PF16360 GTP-binding GTPase Middle Region BSQ44_15185 PF13167 GTP-binding GTPase N-terminal BSQ44_15185 PF01926 50S ribosome-binding GTPase BSQ44_15190 PF17209 Hfq protein BSQ44_15195 PF01063 Amino-transferase class IV BSQ44_15200 PF02080 TrkA-C domain BSQ44_15200 PF02254 TrkA-N domain BSQ44_15205 PF00158 Sigma-54 interaction domain BSQ44_15205 PF00072 Response regulator receiver domain BSQ44_15205 PF02954 Bacterial regulatory protein, Fis family BSQ44_15210 PF00672 HAMP domain BSQ44_15210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_15210 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_15210 PF00989 PAS fold BSQ44_15215 PF00158 Sigma-54 interaction domain BSQ44_15215 PF02954 Bacterial regulatory protein, Fis family BSQ44_15215 PF00072 Response regulator receiver domain BSQ44_15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_15220 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_15220 PF00989 PAS fold BSQ44_15225 PF01207 Dihydrouridine synthase (Dus) BSQ44_15230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BSQ44_15230 PF02542 YgbB family BSQ44_15235 PF02464 Competence-damaged protein BSQ44_15245 PF04055 Radical SAM superfamily BSQ44_15260 PF13188 PAS domain BSQ44_15260 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_15260 PF03707 Bacterial signalling protein N terminal repeat BSQ44_15260 PF00563 EAL domain BSQ44_15265 PF00989 PAS fold BSQ44_15265 PF00563 EAL domain BSQ44_15265 PF01590 GAF domain BSQ44_15265 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_15270 PF13683 Integrase core domain BSQ44_15270 PF13276 HTH-like domain BSQ44_15275 PF01527 Transposase BSQ44_15285 PF00072 Response regulator receiver domain BSQ44_15285 PF13426 PAS domain BSQ44_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_15295 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_15295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_15310 PF02817 e3 binding domain BSQ44_15310 PF00364 Biotin-requiring enzyme BSQ44_15310 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSQ44_15320 PF00364 Biotin-requiring enzyme BSQ44_15320 PF02780 Transketolase, C-terminal domain BSQ44_15320 PF02779 Transketolase, pyrimidine binding domain BSQ44_15325 PF00676 Dehydrogenase E1 component BSQ44_15335 PF03952 Enolase, N-terminal domain BSQ44_15335 PF00113 Enolase, C-terminal TIM barrel domain BSQ44_15340 PF14226 non-haem dioxygenase in morphine synthesis N-terminal BSQ44_15340 PF03171 2OG-Fe(II) oxygenase superfamily BSQ44_15350 PF00793 DAHP synthetase I family BSQ44_15360 PF00768 D-alanyl-D-alanine carboxypeptidase BSQ44_15360 PF07943 Penicillin-binding protein 5, C-terminal domain BSQ44_15370 PF00535 Glycosyl transferase family 2 BSQ44_15375 PF16363 GDP-mannose 4,6 dehydratase BSQ44_15380 PF02798 Glutathione S-transferase, N-terminal domain BSQ44_15380 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_15385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_15390 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_15395 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_15395 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_15400 PF00005 ABC transporter BSQ44_15400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_15420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_15420 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_15420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_15425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BSQ44_15425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BSQ44_15440 PF00202 Aminotransferase class-III BSQ44_15470 PF01571 Aminomethyltransferase folate-binding domain BSQ44_15470 PF16350 FAD dependent oxidoreductase central domain BSQ44_15470 PF01266 FAD dependent oxidoreductase BSQ44_15470 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_15485 PF00881 Nitroreductase family BSQ44_15495 PF00557 Metallopeptidase family M24 BSQ44_15515 PF00809 Pterin binding enzyme BSQ44_15515 PF02310 B12 binding domain BSQ44_15515 PF02574 Homocysteine S-methyltransferase BSQ44_15515 PF02607 B12 binding domain BSQ44_15515 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSQ44_15530 PF12450 von Willebrand factor BSQ44_15530 PF00092 von Willebrand factor type A domain BSQ44_15530 PF12034 Domain of unknown function (DUF3520) BSQ44_15540 PF12464 Maltose acetyltransferase BSQ44_15540 PF14602 Hexapeptide repeat of succinyl-transferase BSQ44_15545 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_15565 PF06253 Trimethylamine methyltransferase (MTTB) BSQ44_15570 PF02310 B12 binding domain BSQ44_15570 PF02607 B12 binding domain BSQ44_15605 PF02574 Homocysteine S-methyltransferase BSQ44_15605 PF00809 Pterin binding enzyme BSQ44_15605 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSQ44_15605 PF02607 B12 binding domain BSQ44_15605 PF02310 B12 binding domain BSQ44_15620 PF03466 LysR substrate binding domain BSQ44_15620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_15630 PF12833 Helix-turn-helix domain BSQ44_15630 PF01965 DJ-1/PfpI family BSQ44_15650 PF01810 LysE type translocator BSQ44_15655 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_15655 PF16350 FAD dependent oxidoreductase central domain BSQ44_15655 PF01266 FAD dependent oxidoreductase BSQ44_15655 PF01571 Aminomethyltransferase folate-binding domain BSQ44_15690 PF00202 Aminotransferase class-III BSQ44_15695 PF16363 GDP-mannose 4,6 dehydratase BSQ44_15705 PF01565 FAD binding domain BSQ44_15705 PF04030 D-arabinono-1,4-lactone oxidase BSQ44_15710 PF01040 UbiA prenyltransferase family BSQ44_15715 PF01266 FAD dependent oxidoreductase BSQ44_15725 PF17806 Sarcosine oxidase A3 domain BSQ44_15725 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_15725 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_15725 PF01571 Aminomethyltransferase folate-binding domain BSQ44_15740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_15740 PF03466 LysR substrate binding domain BSQ44_15785 PF00881 Nitroreductase family BSQ44_15795 PF01266 FAD dependent oxidoreductase BSQ44_15795 PF16350 FAD dependent oxidoreductase central domain BSQ44_15795 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_15795 PF01571 Aminomethyltransferase folate-binding domain BSQ44_15800 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_15805 PF02574 Homocysteine S-methyltransferase BSQ44_15810 PF00155 Aminotransferase class I and II BSQ44_15815 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_15815 PF16350 FAD dependent oxidoreductase central domain BSQ44_15815 PF01571 Aminomethyltransferase folate-binding domain BSQ44_15815 PF01266 FAD dependent oxidoreductase BSQ44_15830 PF13276 HTH-like domain BSQ44_15830 PF13683 Integrase core domain BSQ44_15835 PF01527 Transposase BSQ44_15865 PF01209 ubiE/COQ5 methyltransferase family BSQ44_15870 PF01571 Aminomethyltransferase folate-binding domain BSQ44_15870 PF16350 FAD dependent oxidoreductase central domain BSQ44_15870 PF01266 FAD dependent oxidoreductase BSQ44_15870 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_15880 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_15885 PF00571 CBS domain BSQ44_15885 PF00005 ABC transporter BSQ44_15895 PF08220 DeoR-like helix-turn-helix domain BSQ44_15895 PF00455 DeoR C terminal sensor domain BSQ44_15910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_15910 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_15910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_15920 PF00005 ABC transporter BSQ44_15925 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_15930 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_15935 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_15940 PF07969 Amidohydrolase family BSQ44_15975 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BSQ44_15975 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BSQ44_15980 PF00440 Bacterial regulatory proteins, tetR family BSQ44_15980 PF13977 BetI-type transcriptional repressor, C-terminal BSQ44_15995 PF01638 HxlR-like helix-turn-helix BSQ44_16005 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BSQ44_16020 PF13538 UvrD-like helicase C-terminal domain BSQ44_16020 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BSQ44_16020 PF14490 Helix-hairpin-helix containing domain BSQ44_16035 PF02979 Nitrile hydratase, alpha chain BSQ44_16045 PF13460 NAD(P)H-binding BSQ44_16060 PF01522 Polysaccharide deacetylase BSQ44_16080 PF00849 RNA pseudouridylate synthase BSQ44_16080 PF01479 S4 domain BSQ44_16085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BSQ44_16100 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_16100 PF16193 AAA C-terminal domain BSQ44_16100 PF12002 MgsA AAA+ ATPase C terminal BSQ44_16105 PF00595 PDZ domain BSQ44_16110 PF01196 Ribosomal protein L17 BSQ44_16115 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BSQ44_16115 PF01000 RNA polymerase Rpb3/RpoA insert domain BSQ44_16115 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BSQ44_16120 PF00411 Ribosomal protein S11 BSQ44_16125 PF00416 Ribosomal protein S13/S18 BSQ44_16135 PF00344 SecY translocase BSQ44_16140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BSQ44_16145 PF00327 Ribosomal protein L30p/L7e BSQ44_16150 PF00333 Ribosomal protein S5, N-terminal domain BSQ44_16150 PF03719 Ribosomal protein S5, C-terminal domain BSQ44_16155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BSQ44_16160 PF00347 Ribosomal protein L6 BSQ44_16170 PF00673 ribosomal L5P family C-terminus BSQ44_16170 PF00281 Ribosomal protein L5 BSQ44_16175 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BSQ44_16175 PF00467 KOW motif BSQ44_16180 PF00238 Ribosomal protein L14p/L23e BSQ44_16185 PF00366 Ribosomal protein S17 BSQ44_16190 PF00831 Ribosomal L29 protein BSQ44_16195 PF00252 Ribosomal protein L16p/L10e BSQ44_16200 PF00189 Ribosomal protein S3, C-terminal domain BSQ44_16200 PF07650 KH domain BSQ44_16205 PF00237 Ribosomal protein L22p/L17e BSQ44_16210 PF00203 Ribosomal protein S19 BSQ44_16215 PF03947 Ribosomal Proteins L2, C-terminal domain BSQ44_16215 PF00181 Ribosomal Proteins L2, RNA binding domain BSQ44_16220 PF00276 Ribosomal protein L23 BSQ44_16225 PF00573 Ribosomal protein L4/L1 family BSQ44_16230 PF00297 Ribosomal protein L3 BSQ44_16235 PF00338 Ribosomal protein S10p/S20e BSQ44_16240 PF03144 Elongation factor Tu domain 2 BSQ44_16240 PF00009 Elongation factor Tu GTP binding domain BSQ44_16240 PF03143 Elongation factor Tu C-terminal domain BSQ44_16245 PF00679 Elongation factor G C-terminus BSQ44_16245 PF03764 Elongation factor G, domain IV BSQ44_16245 PF00009 Elongation factor Tu GTP binding domain BSQ44_16245 PF03144 Elongation factor Tu domain 2 BSQ44_16245 PF14492 Elongation Factor G, domain II BSQ44_16250 PF00177 Ribosomal protein S7p/S5e BSQ44_16255 PF00164 Ribosomal protein S12/S23 BSQ44_16265 PF05000 RNA polymerase Rpb1, domain 4 BSQ44_16265 PF04983 RNA polymerase Rpb1, domain 3 BSQ44_16265 PF00623 RNA polymerase Rpb1, domain 2 BSQ44_16265 PF04998 RNA polymerase Rpb1, domain 5 BSQ44_16265 PF04997 RNA polymerase Rpb1, domain 1 BSQ44_16270 PF04563 RNA polymerase beta subunit BSQ44_16270 PF04561 RNA polymerase Rpb2, domain 2 BSQ44_16270 PF04565 RNA polymerase Rpb2, domain 3 BSQ44_16270 PF10385 RNA polymerase beta subunit external 1 domain BSQ44_16270 PF00562 RNA polymerase Rpb2, domain 6 BSQ44_16270 PF04560 RNA polymerase Rpb2, domain 7 BSQ44_16275 PF00542 Ribosomal protein L7/L12 C-terminal domain BSQ44_16275 PF16320 Ribosomal protein L7/L12 dimerisation domain BSQ44_16280 PF00466 Ribosomal protein L10 BSQ44_16285 PF00687 Ribosomal protein L1p/L10e family BSQ44_16290 PF00298 Ribosomal protein L11, RNA binding domain BSQ44_16290 PF03946 Ribosomal protein L11, N-terminal domain BSQ44_16295 PF00467 KOW motif BSQ44_16295 PF02357 Transcription termination factor nusG BSQ44_16300 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BSQ44_16310 PF00795 Carbon-nitrogen hydrolase BSQ44_16310 PF02540 NAD synthase BSQ44_16320 PF00132 Bacterial transferase hexapeptide (six repeats) BSQ44_16330 PF02630 SCO1/SenC BSQ44_16335 PF01494 FAD binding domain BSQ44_16350 PF00557 Metallopeptidase family M24 BSQ44_16350 PF01321 Creatinase/Prolidase N-terminal domain BSQ44_16350 PF00557 Metallopeptidase family M24 BSQ44_16350 PF01321 Creatinase/Prolidase N-terminal domain BSQ44_16360 PF03120 NAD-dependent DNA ligase OB-fold domain BSQ44_16360 PF00533 BRCA1 C Terminus (BRCT) domain BSQ44_16360 PF01653 NAD-dependent DNA ligase adenylation domain BSQ44_16360 PF12826 Helix-hairpin-helix motif BSQ44_16360 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BSQ44_16365 PF02463 RecF/RecN/SMC N terminal domain BSQ44_16370 PF13525 Outer membrane lipoprotein BSQ44_16375 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BSQ44_16380 PF12327 FtsZ family, C-terminal domain BSQ44_16380 PF00091 Tubulin/FtsZ family, GTPase domain BSQ44_16385 PF02491 SHS2 domain inserted in FTSA BSQ44_16390 PF08478 POTRA domain, FtsQ-type BSQ44_16390 PF03799 Cell division protein FtsQ BSQ44_16395 PF07478 D-ala D-ala ligase C-terminus BSQ44_16395 PF01820 D-ala D-ala ligase N-terminus BSQ44_16400 PF01565 FAD binding domain BSQ44_16400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BSQ44_16405 PF08245 Mur ligase middle domain BSQ44_16405 PF01225 Mur ligase family, catalytic domain BSQ44_16405 PF02875 Mur ligase family, glutamate ligase domain BSQ44_16410 PF04101 Glycosyltransferase family 28 C-terminal domain BSQ44_16410 PF03033 Glycosyltransferase family 28 N-terminal domain BSQ44_16415 PF01098 Cell cycle protein BSQ44_16420 PF08245 Mur ligase middle domain BSQ44_16425 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BSQ44_16425 PF00953 Glycosyl transferase family 4 BSQ44_16430 PF01225 Mur ligase family, catalytic domain BSQ44_16430 PF08245 Mur ligase middle domain BSQ44_16430 PF02875 Mur ligase family, glutamate ligase domain BSQ44_16435 PF02875 Mur ligase family, glutamate ligase domain BSQ44_16435 PF01225 Mur ligase family, catalytic domain BSQ44_16435 PF08245 Mur ligase middle domain BSQ44_16440 PF03717 Penicillin-binding Protein dimerisation domain BSQ44_16440 PF00905 Penicillin binding protein transpeptidase domain BSQ44_16450 PF01795 MraW methylase family BSQ44_16455 PF02381 MraZ protein, putative antitoxin-like BSQ44_16460 PF01053 Cys/Met metabolism PLP-dependent enzyme BSQ44_16485 PF01510 N-acetylmuramoyl-L-alanine amidase BSQ44_16490 PF00226 DnaJ domain BSQ44_16490 PF05099 Tellurite resistance protein TerB BSQ44_16505 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_16505 PF01968 Hydantoinase/oxoprolinase BSQ44_16530 PF00128 Alpha amylase, catalytic domain BSQ44_16550 PF01183 Glycosyl hydrolases family 25 BSQ44_16570 PF02219 Methylenetetrahydrofolate reductase BSQ44_16575 PF01209 ubiE/COQ5 methyltransferase family BSQ44_16580 PF01980 tRNA-methyltransferase O BSQ44_16600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BSQ44_16600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BSQ44_16625 PF00005 ABC transporter BSQ44_16625 PF12848 ABC transporter BSQ44_16630 PF00270 DEAD/DEAH box helicase BSQ44_16630 PF00271 Helicase conserved C-terminal domain BSQ44_16635 PF00106 short chain dehydrogenase BSQ44_16645 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_16650 PF00005 ABC transporter BSQ44_16675 PF02515 CoA-transferase family III BSQ44_16680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_16680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_16680 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_16705 PF00970 Oxidoreductase FAD-binding domain BSQ44_16705 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_16705 PF00175 Oxidoreductase NAD-binding domain BSQ44_16710 PF01883 Iron-sulfur cluster assembly protein BSQ44_16715 PF05138 Phenylacetic acid catabolic protein BSQ44_16720 PF06243 Phenylacetic acid degradation B BSQ44_16740 PF05138 Phenylacetic acid catabolic protein BSQ44_16750 PF00873 AcrB/AcrD/AcrF family BSQ44_16760 PF00440 Bacterial regulatory proteins, tetR family BSQ44_16765 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BSQ44_16785 PF00521 DNA gyrase/topoisomerase IV, subunit A BSQ44_16785 PF03989 DNA gyrase C-terminal domain, beta-propeller BSQ44_16795 PF01470 Pyroglutamyl peptidase BSQ44_16800 PF01336 OB-fold nucleic acid binding domain BSQ44_16800 PF00152 tRNA synthetases class II (D, K and N) BSQ44_16800 PF02938 GAD domain BSQ44_16825 PF01612 3'-5' exonuclease BSQ44_16825 PF00570 HRDC domain BSQ44_16830 PF02541 Ppx/GppA phosphatase family BSQ44_16835 PF17941 Polyphosphate kinase C-terminal domain 1 BSQ44_16835 PF13090 Polyphosphate kinase C-terminal domain 2 BSQ44_16835 PF02503 Polyphosphate kinase middle domain BSQ44_16835 PF13089 Polyphosphate kinase N-terminal domain BSQ44_16845 PF01494 FAD binding domain BSQ44_16855 PF00005 ABC transporter BSQ44_16860 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_16865 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_16870 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_16875 PF01053 Cys/Met metabolism PLP-dependent enzyme BSQ44_16885 PF01177 Asp/Glu/Hydantoin racemase BSQ44_16890 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_16895 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_16905 PF00005 ABC transporter BSQ44_16905 PF08402 TOBE domain BSQ44_16915 PF00270 DEAD/DEAH box helicase BSQ44_16915 PF00570 HRDC domain BSQ44_16915 PF16124 RecQ zinc-binding BSQ44_16915 PF09382 RQC domain BSQ44_16915 PF00271 Helicase conserved C-terminal domain BSQ44_16920 PF00392 Bacterial regulatory proteins, gntR family BSQ44_16920 PF07729 FCD domain BSQ44_16985 PF01812 5-formyltetrahydrofolate cyclo-ligase family BSQ44_17000 PF01272 Transcription elongation factor, GreA/GreB, C-term BSQ44_17000 PF14760 Rnk N-terminus BSQ44_17010 PF01925 Sulfite exporter TauE/SafE BSQ44_17030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BSQ44_17085 PF04402 Protein of unknown function (DUF541) BSQ44_17095 PF03692 Putative zinc- or iron-chelating domain BSQ44_17115 PF04055 Radical SAM superfamily BSQ44_17120 PF13545 Crp-like helix-turn-helix domain BSQ44_17120 PF00027 Cyclic nucleotide-binding domain BSQ44_17135 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSQ44_17150 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BSQ44_17150 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BSQ44_17165 PF13746 4Fe-4S dicluster domain BSQ44_17165 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BSQ44_17165 PF12801 4Fe-4S binding domain BSQ44_17170 PF05751 FixH BSQ44_17180 PF03597 Cytochrome oxidase maturation protein cbb3-type BSQ44_17195 PF00596 Class II Aldolase and Adducin N-terminal domain BSQ44_17200 PF01850 PIN domain BSQ44_17205 PF07704 Rv0623-like transcription factor BSQ44_17215 PF02653 Branched-chain amino acid transport system / permease component BSQ44_17220 PF00005 ABC transporter BSQ44_17225 PF01636 Phosphotransferase enzyme family BSQ44_17230 PF01008 Initiation factor 2 subunit family BSQ44_17250 PF00155 Aminotransferase class I and II BSQ44_17250 PF00392 Bacterial regulatory proteins, gntR family BSQ44_17255 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BSQ44_17255 PF00586 AIR synthase related protein, N-terminal domain BSQ44_17255 PF02769 AIR synthase related protein, C-terminal domain BSQ44_17260 PF01722 BolA-like protein BSQ44_17265 PF00462 Glutaredoxin BSQ44_17270 PF07690 Major Facilitator Superfamily BSQ44_17275 PF01171 PP-loop family BSQ44_17280 PF01479 S4 domain BSQ44_17280 PF00163 Ribosomal protein S4/S9 N-terminal domain BSQ44_17295 PF01177 Asp/Glu/Hydantoin racemase BSQ44_17300 PF00588 SpoU rRNA Methylase family BSQ44_17310 PF00561 alpha/beta hydrolase fold BSQ44_17320 PF00180 Isocitrate/isopropylmalate dehydrogenase BSQ44_17325 PF00043 Glutathione S-transferase, C-terminal domain BSQ44_17325 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_17330 PF00230 Major intrinsic protein BSQ44_17335 PF00782 Dual specificity phosphatase, catalytic domain BSQ44_17340 PF02272 DHHA1 domain BSQ44_17340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BSQ44_17340 PF01411 tRNA synthetases class II (A) BSQ44_17345 PF00154 recA bacterial DNA recombination protein BSQ44_17355 PF04227 Indigoidine synthase A like protein BSQ44_17360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSQ44_17360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_17380 PF00294 pfkB family carbohydrate kinase BSQ44_17385 PF00550 Phosphopantetheine attachment site BSQ44_17395 PF00109 Beta-ketoacyl synthase, N-terminal domain BSQ44_17395 PF02801 Beta-ketoacyl synthase, C-terminal domain BSQ44_17400 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_17400 PF00107 Zinc-binding dehydrogenase BSQ44_17405 PF03279 Bacterial lipid A biosynthesis acyltransferase BSQ44_17415 PF01546 Peptidase family M20/M25/M40 BSQ44_17415 PF07687 Peptidase dimerisation domain BSQ44_17450 PF04976 DMSO reductase anchor subunit (DmsC) BSQ44_17455 PF13247 4Fe-4S dicluster domain BSQ44_17455 PF12800 4Fe-4S binding domain BSQ44_17460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BSQ44_17460 PF00384 Molybdopterin oxidoreductase BSQ44_17460 PF01568 Molydopterin dinucleotide binding domain BSQ44_17465 PF01220 Dehydroquinase class II BSQ44_17485 PF13411 MerR HTH family regulatory protein BSQ44_17490 PF00216 Bacterial DNA-binding protein BSQ44_17495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BSQ44_17495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BSQ44_17500 PF02504 Fatty acid synthesis protein BSQ44_17515 PF04355 SmpA / OmlA family BSQ44_17530 PF02585 GlcNAc-PI de-N-acetylase BSQ44_17555 PF03030 Inorganic H+ pyrophosphatase BSQ44_17560 PF07690 Major Facilitator Superfamily BSQ44_17565 PF01029 NusB family BSQ44_17570 PF00885 6,7-dimethyl-8-ribityllumazine synthase BSQ44_17575 PF00677 Lumazine binding domain BSQ44_17580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BSQ44_17580 PF01872 RibD C-terminal domain BSQ44_17585 PF03477 ATP cone domain BSQ44_17610 PF00464 Serine hydroxymethyltransferase BSQ44_17615 PF03734 L,D-transpeptidase catalytic domain BSQ44_17615 PF01471 Putative peptidoglycan binding domain BSQ44_17630 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_17635 PF00490 Delta-aminolevulinic acid dehydratase BSQ44_17660 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_17660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_17670 PF04376 Arginine-tRNA-protein transferase, N terminus BSQ44_17670 PF04377 Arginine-tRNA-protein transferase, C terminus BSQ44_17680 PF00501 AMP-binding enzyme BSQ44_17680 PF13193 AMP-binding enzyme C-terminal domain BSQ44_17690 PF07848 PaaX-like protein BSQ44_17690 PF08223 PaaX-like protein C-terminal domain BSQ44_17700 PF14535 AMP-binding enzyme C-terminal domain BSQ44_17700 PF00501 AMP-binding enzyme BSQ44_17705 PF03061 Thioesterase superfamily BSQ44_17710 PF00067 Cytochrome P450 BSQ44_17715 PF00171 Aldehyde dehydrogenase family BSQ44_17715 PF01575 MaoC like domain BSQ44_17720 PF07690 Major Facilitator Superfamily BSQ44_17725 PF10397 Adenylosuccinate lyase C-terminus BSQ44_17725 PF00206 Lyase BSQ44_17730 PF00775 Dioxygenase BSQ44_17745 PF00775 Dioxygenase BSQ44_17745 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BSQ44_17750 PF02627 Carboxymuconolactone decarboxylase family BSQ44_17755 PF01494 FAD binding domain BSQ44_17765 PF00487 Fatty acid desaturase BSQ44_17770 PF00313 'Cold-shock' DNA-binding domain BSQ44_17790 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_17795 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_17805 PF00005 ABC transporter BSQ44_17810 PF01979 Amidohydrolase family BSQ44_17815 PF01810 LysE type translocator BSQ44_17820 PF07687 Peptidase dimerisation domain BSQ44_17820 PF01546 Peptidase family M20/M25/M40 BSQ44_17825 PF07883 Cupin domain BSQ44_17830 PF00202 Aminotransferase class-III BSQ44_17835 PF08362 YcdC-like protein, C-terminal region BSQ44_17835 PF00440 Bacterial regulatory proteins, tetR family BSQ44_17840 PF00563 EAL domain BSQ44_17840 PF17154 Gammaproteobacterial periplasmic sensor domain BSQ44_17840 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_17840 PF00672 HAMP domain BSQ44_17860 PF01180 Dihydroorotate dehydrogenase BSQ44_17865 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BSQ44_17865 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_17870 PF13417 Glutathione S-transferase, N-terminal domain BSQ44_17875 PF01850 PIN domain BSQ44_17885 PF06253 Trimethylamine methyltransferase (MTTB) BSQ44_17900 PF03734 L,D-transpeptidase catalytic domain BSQ44_17900 PF01476 LysM domain BSQ44_17915 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_17915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_17915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_17925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_17925 PF00005 ABC transporter BSQ44_17930 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_17930 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_17935 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_17940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_17945 PF08379 Bacterial transglutaminase-like N-terminal region BSQ44_17945 PF01841 Transglutaminase-like superfamily BSQ44_17950 PF04168 A predicted alpha-helical domain with a conserved ER motif. BSQ44_17950 PF14403 Circularly permuted ATP-grasp type 2 BSQ44_17960 PF02633 Creatinine amidohydrolase BSQ44_17970 PF00005 ABC transporter BSQ44_17975 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_17980 PF07969 Amidohydrolase family BSQ44_17990 PF02525 Flavodoxin-like fold BSQ44_17995 PF02525 Flavodoxin-like fold BSQ44_18000 PF07678 A-macroglobulin TED domain BSQ44_18000 PF01835 MG2 domain BSQ44_18000 PF17962 Bacterial macroglobulin domain 6 BSQ44_18000 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BSQ44_18000 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BSQ44_18000 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BSQ44_18000 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BSQ44_18000 PF07703 Alpha-2-macroglobulin bait region domain BSQ44_18000 PF00207 Alpha-2-macroglobulin family BSQ44_18005 PF00912 Transglycosylase BSQ44_18005 PF06832 Penicillin-Binding Protein C-terminus Family BSQ44_18005 PF00905 Penicillin binding protein transpeptidase domain BSQ44_18015 PF01202 Shikimate kinase BSQ44_18020 PF00970 Oxidoreductase FAD-binding domain BSQ44_18020 PF00037 4Fe-4S binding domain BSQ44_18020 PF00175 Oxidoreductase NAD-binding domain BSQ44_18035 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_18045 PF12697 Alpha/beta hydrolase family BSQ44_18050 PF00501 AMP-binding enzyme BSQ44_18050 PF13193 AMP-binding enzyme C-terminal domain BSQ44_18055 PF00491 Arginase family BSQ44_18060 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_18065 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSQ44_18070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_18080 PF00701 Dihydrodipicolinate synthetase family BSQ44_18085 PF00174 Oxidoreductase molybdopterin binding domain BSQ44_18090 PF03466 LysR substrate binding domain BSQ44_18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_18095 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_18100 PF01037 Lrp/AsnC ligand binding domain BSQ44_18110 PF00535 Glycosyl transferase family 2 BSQ44_18115 PF00534 Glycosyl transferases group 1 BSQ44_18115 PF13439 Glycosyltransferase Family 4 BSQ44_18120 PF00534 Glycosyl transferases group 1 BSQ44_18125 PF03449 Transcription elongation factor, N-terminal BSQ44_18125 PF01272 Transcription elongation factor, GreA/GreB, C-term BSQ44_18180 PF03061 Thioesterase superfamily BSQ44_18185 PF05199 GMC oxidoreductase BSQ44_18185 PF00732 GMC oxidoreductase BSQ44_18190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_18190 PF13378 Enolase C-terminal domain-like BSQ44_18205 PF00561 alpha/beta hydrolase fold BSQ44_18210 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BSQ44_18220 PF07536 HWE histidine kinase BSQ44_18220 PF13426 PAS domain BSQ44_18220 PF08447 PAS fold BSQ44_18225 PF01565 FAD binding domain BSQ44_18235 PF17757 UvrB interaction domain BSQ44_18235 PF00271 Helicase conserved C-terminal domain BSQ44_18235 PF04851 Type III restriction enzyme, res subunit BSQ44_18235 PF02151 UvrB/uvrC motif BSQ44_18235 PF12344 Ultra-violet resistance protein B BSQ44_18240 PF00296 Luciferase-like monooxygenase BSQ44_18265 PF00313 'Cold-shock' DNA-binding domain BSQ44_18270 PF00313 'Cold-shock' DNA-binding domain BSQ44_18280 PF00753 Metallo-beta-lactamase superfamily BSQ44_18285 PF01063 Amino-transferase class IV BSQ44_18290 PF12802 MarR family BSQ44_18295 PF00486 Transcriptional regulatory protein, C terminal BSQ44_18295 PF00072 Response regulator receiver domain BSQ44_18300 PF00672 HAMP domain BSQ44_18300 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_18300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_18315 PF13537 Glutamine amidotransferase domain BSQ44_18315 PF00733 Asparagine synthase BSQ44_18325 PF00582 Universal stress protein family BSQ44_18330 PF00916 Sulfate permease family BSQ44_18330 PF01740 STAS domain BSQ44_18335 PF01588 Putative tRNA binding domain BSQ44_18350 PF01790 Prolipoprotein diacylglyceryl transferase BSQ44_18360 PF02578 Multi-copper polyphenol oxidoreductase laccase BSQ44_18375 PF14572 Phosphoribosyl synthetase-associated domain BSQ44_18375 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BSQ44_18380 PF00563 EAL domain BSQ44_18380 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_18380 PF03707 Bacterial signalling protein N terminal repeat BSQ44_18385 PF02417 Chromate transporter BSQ44_18400 PF03466 LysR substrate binding domain BSQ44_18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_18415 PF14693 Ribosomal protein TL5, C-terminal domain BSQ44_18415 PF01386 Ribosomal L25p family BSQ44_18420 PF01195 Peptidyl-tRNA hydrolase BSQ44_18425 PF01527 Transposase BSQ44_18445 PF01926 50S ribosome-binding GTPase BSQ44_18445 PF06071 Protein of unknown function (DUF933) BSQ44_18465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_18485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_18485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_18485 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_18490 PF01070 FMN-dependent dehydrogenase BSQ44_18500 PF07687 Peptidase dimerisation domain BSQ44_18500 PF01546 Peptidase family M20/M25/M40 BSQ44_18515 PF02653 Branched-chain amino acid transport system / permease component BSQ44_18520 PF00005 ABC transporter BSQ44_18525 PF00005 ABC transporter BSQ44_18525 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_18530 PF13458 Periplasmic binding protein BSQ44_18535 PF01063 Amino-transferase class IV BSQ44_18540 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BSQ44_18545 PF02311 AraC-like ligand binding domain BSQ44_18545 PF12833 Helix-turn-helix domain BSQ44_18550 PF00155 Aminotransferase class I and II BSQ44_18560 PF01037 Lrp/AsnC ligand binding domain BSQ44_18565 PF00294 pfkB family carbohydrate kinase BSQ44_18570 PF08125 Mannitol dehydrogenase C-terminal domain BSQ44_18570 PF01232 Mannitol dehydrogenase Rossmann domain BSQ44_18580 PF00005 ABC transporter BSQ44_18580 PF08402 TOBE domain BSQ44_18585 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_18590 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_18600 PF04198 Putative sugar-binding domain BSQ44_18605 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_18610 PF00561 alpha/beta hydrolase fold BSQ44_18645 PF03884 DNA gyrase inhibitor YacG BSQ44_18650 PF00156 Phosphoribosyl transferase domain BSQ44_18655 PF00032 Cytochrome b(C-terminal)/b6/petD BSQ44_18655 PF02167 Cytochrome C1 family BSQ44_18655 PF00033 Cytochrome b/b6/petB BSQ44_18660 PF00033 Cytochrome b/b6/petB BSQ44_18660 PF00032 Cytochrome b(C-terminal)/b6/petD BSQ44_18665 PF00355 Rieske [2Fe-2S] domain BSQ44_18665 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BSQ44_18670 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX BSQ44_18670 PF16824 C-terminal carbohydrate-binding module BSQ44_18675 PF03062 MBOAT, membrane-bound O-acyltransferase family BSQ44_18690 PF00664 ABC transporter transmembrane region BSQ44_18690 PF00005 ABC transporter BSQ44_18695 PF00005 ABC transporter BSQ44_18695 PF00664 ABC transporter transmembrane region BSQ44_18700 PF00588 SpoU rRNA Methylase family BSQ44_18710 PF01218 Coproporphyrinogen III oxidase BSQ44_18720 PF01743 Poly A polymerase head domain BSQ44_18720 PF13735 tRNA nucleotidyltransferase domain 2 putative BSQ44_18720 PF12627 Probable RNA and SrmB- binding site of polymerase A BSQ44_18725 PF00293 NUDIX domain BSQ44_18735 PF17863 AAA lid domain BSQ44_18735 PF07726 ATPase family associated with various cellular activities (AAA) BSQ44_18760 PF13409 Glutathione S-transferase, N-terminal domain BSQ44_18780 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_18785 PF00561 alpha/beta hydrolase fold BSQ44_18790 PF00682 HMGL-like BSQ44_18790 PF08502 LeuA allosteric (dimerisation) domain BSQ44_18800 PF00561 alpha/beta hydrolase fold BSQ44_18805 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_18805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSQ44_18805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSQ44_18810 PF00501 AMP-binding enzyme BSQ44_18810 PF13193 AMP-binding enzyme C-terminal domain BSQ44_18815 PF02803 Thiolase, C-terminal domain BSQ44_18815 PF00108 Thiolase, N-terminal domain BSQ44_18820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_18820 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_18820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_18825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_18825 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_18825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_18830 PF01226 Formate/nitrite transporter BSQ44_18835 PF01022 Bacterial regulatory protein, arsR family BSQ44_18840 PF04143 Sulphur transport BSQ44_18850 PF00753 Metallo-beta-lactamase superfamily BSQ44_18860 PF00916 Sulfate permease family BSQ44_18860 PF01740 STAS domain BSQ44_18865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_18880 PF01037 Lrp/AsnC ligand binding domain BSQ44_18885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_18920 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_18920 PF00107 Zinc-binding dehydrogenase BSQ44_18930 PF00155 Aminotransferase class I and II BSQ44_18935 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_18935 PF17158 Membrane-associated sensor, integral membrane domain BSQ44_18945 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_18945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_18945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_18950 PF03707 Bacterial signalling protein N terminal repeat BSQ44_18950 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_18950 PF00563 EAL domain BSQ44_18955 PF08676 MutL C terminal dimerisation domain BSQ44_18955 PF01119 DNA mismatch repair protein, C-terminal domain BSQ44_18970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BSQ44_18975 PF00534 Glycosyl transferases group 1 BSQ44_18975 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BSQ44_18990 PF00459 Inositol monophosphatase family BSQ44_18995 PF01523 Putative modulator of DNA gyrase BSQ44_19000 PF00999 Sodium/hydrogen exchanger family BSQ44_19000 PF02254 TrkA-N domain BSQ44_19005 PF01554 MatE BSQ44_19010 PF01734 Patatin-like phospholipase BSQ44_19015 PF05193 Peptidase M16 inactive domain BSQ44_19020 PF00675 Insulinase (Peptidase family M16) BSQ44_19020 PF05193 Peptidase M16 inactive domain BSQ44_19030 PF00849 RNA pseudouridylate synthase BSQ44_19030 PF01479 S4 domain BSQ44_19035 PF14437 MafB19-like deaminase BSQ44_19045 PF00133 tRNA synthetases class I (I, L, M and V) BSQ44_19045 PF08264 Anticodon-binding domain of tRNA BSQ44_19055 PF06574 FAD synthetase BSQ44_19055 PF01687 Riboflavin kinase BSQ44_19080 PF00166 Chaperonin 10 Kd subunit BSQ44_19085 PF00118 TCP-1/cpn60 chaperonin family BSQ44_19095 PF02082 Transcriptional regulator BSQ44_19100 PF01925 Sulfite exporter TauE/SafE BSQ44_19105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_19110 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSQ44_19110 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_19115 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_19120 PF03471 Transporter associated domain BSQ44_19120 PF01595 Cyclin M transmembrane N-terminal domain BSQ44_19120 PF00571 CBS domain BSQ44_19125 PF00206 Lyase BSQ44_19125 PF10415 Fumarase C C-terminus BSQ44_19135 PF07681 DoxX BSQ44_19140 PF01634 ATP phosphoribosyltransferase BSQ44_19145 PF13393 Histidyl-tRNA synthetase BSQ44_19150 PF13393 Histidyl-tRNA synthetase BSQ44_19150 PF03129 Anticodon binding domain BSQ44_19165 PF03352 Methyladenine glycosylase BSQ44_19170 PF03734 L,D-transpeptidase catalytic domain BSQ44_19170 PF17969 L,D-transpeptidase C-terminal domain BSQ44_19205 PF01565 FAD binding domain BSQ44_19220 PF02913 FAD linked oxidases, C-terminal domain BSQ44_19220 PF01565 FAD binding domain BSQ44_19225 PF07729 FCD domain BSQ44_19225 PF00392 Bacterial regulatory proteins, gntR family BSQ44_19230 PF02754 Cysteine-rich domain BSQ44_19235 PF13183 4Fe-4S dicluster domain BSQ44_19235 PF11870 Domain of unknown function (DUF3390) BSQ44_19235 PF02589 LUD domain BSQ44_19240 PF02589 LUD domain BSQ44_19265 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_19265 PF17151 Periplasmic sensor domain BSQ44_19270 PF04452 RNA methyltransferase BSQ44_19275 PF00012 Hsp70 protein BSQ44_19285 PF04107 Glutamate-cysteine ligase family 2(GCS2) BSQ44_19305 PF04444 Catechol dioxygenase N terminus BSQ44_19305 PF00775 Dioxygenase BSQ44_19310 PF01494 FAD binding domain BSQ44_19320 PF02653 Branched-chain amino acid transport system / permease component BSQ44_19325 PF00005 ABC transporter BSQ44_19330 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_19330 PF00005 ABC transporter BSQ44_19340 PF00465 Iron-containing alcohol dehydrogenase BSQ44_19355 PF00775 Dioxygenase BSQ44_19355 PF04444 Catechol dioxygenase N terminus BSQ44_19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_19360 PF03466 LysR substrate binding domain BSQ44_19375 PF09361 Phasin protein BSQ44_19380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_19380 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_19380 PF00989 PAS fold BSQ44_19380 PF13188 PAS domain BSQ44_19380 PF13426 PAS domain BSQ44_19385 PF13416 Bacterial extracellular solute-binding protein BSQ44_19390 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_19395 PF00501 AMP-binding enzyme BSQ44_19395 PF13193 AMP-binding enzyme C-terminal domain BSQ44_19410 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_19415 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_19420 PF08402 TOBE domain BSQ44_19420 PF00005 ABC transporter BSQ44_19425 PF13416 Bacterial extracellular solute-binding protein BSQ44_19430 PF00120 Glutamine synthetase, catalytic domain BSQ44_19440 PF00708 Acylphosphatase BSQ44_19445 PF00107 Zinc-binding dehydrogenase BSQ44_19445 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_19455 PF01381 Helix-turn-helix BSQ44_19455 PF06114 IrrE N-terminal-like domain BSQ44_19455 PF09856 Predicted transcriptional regulator (DUF2083) BSQ44_19460 PF00463 Isocitrate lyase family BSQ44_19475 PF00120 Glutamine synthetase, catalytic domain BSQ44_19480 PF01402 Ribbon-helix-helix protein, copG family BSQ44_19490 PF01266 FAD dependent oxidoreductase BSQ44_19500 PF00067 Cytochrome P450 BSQ44_19505 PF03600 Citrate transporter BSQ44_19505 PF02080 TrkA-C domain BSQ44_19525 PF00171 Aldehyde dehydrogenase family BSQ44_19530 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BSQ44_19530 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BSQ44_19535 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BSQ44_19540 PF00920 Dehydratase family BSQ44_19550 PF12833 Helix-turn-helix domain BSQ44_19550 PF01965 DJ-1/PfpI family BSQ44_19555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BSQ44_19555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BSQ44_19575 PF03808 Glycosyl transferase WecB/TagA/CpsF family BSQ44_19595 PF03807 NADP oxidoreductase coenzyme F420-dependent BSQ44_19595 PF14748 Pyrroline-5-carboxylate reductase dimerisation BSQ44_19610 PF02615 Malate/L-lactate dehydrogenase BSQ44_19615 PF05145 Transition state regulatory protein AbrB BSQ44_19625 PF00850 Histone deacetylase domain BSQ44_19630 PF01554 MatE BSQ44_19635 PF01180 Dihydroorotate dehydrogenase BSQ44_19655 PF00196 Bacterial regulatory proteins, luxR family BSQ44_19655 PF00072 Response regulator receiver domain BSQ44_19660 PF00672 HAMP domain BSQ44_19660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_19660 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_19660 PF01627 Hpt domain BSQ44_19660 PF00072 Response regulator receiver domain BSQ44_19665 PF01741 Large-conductance mechanosensitive channel, MscL BSQ44_19670 PF00958 GMP synthase C terminal domain BSQ44_19670 PF00117 Glutamine amidotransferase class-I BSQ44_19680 PF07995 Glucose / Sorbosone dehydrogenase BSQ44_19685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_19685 PF03466 LysR substrate binding domain BSQ44_19690 PF00141 Peroxidase BSQ44_19695 PF01189 16S rRNA methyltransferase RsmB/F BSQ44_19695 PF01029 NusB family BSQ44_19705 PF03073 TspO/MBR family BSQ44_19720 PF02545 Maf-like protein BSQ44_19725 PF01176 Translation initiation factor 1A / IF-1 BSQ44_19735 PF06793 Uncharacterised protein family (UPF0262) BSQ44_19740 PF00815 Histidinol dehydrogenase BSQ44_19750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BSQ44_19775 PF04349 Periplasmic glucan biosynthesis protein, MdoG BSQ44_19780 PF13632 Glycosyl transferase family group 2 BSQ44_19800 PF02308 MgtC family BSQ44_19805 PF00118 TCP-1/cpn60 chaperonin family BSQ44_19810 PF00166 Chaperonin 10 Kd subunit BSQ44_19815 PF01370 NAD dependent epimerase/dehydratase family BSQ44_19820 PF00155 Aminotransferase class I and II BSQ44_19825 PF00571 CBS domain BSQ44_19825 PF00478 IMP dehydrogenase / GMP reductase domain BSQ44_19830 PF07690 Major Facilitator Superfamily BSQ44_19835 PF01728 FtsJ-like methyltransferase BSQ44_19860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_19865 PF04199 Putative cyclase BSQ44_19870 PF05853 beta-keto acid cleavage enzyme BSQ44_19910 PF00392 Bacterial regulatory proteins, gntR family BSQ44_19910 PF07702 UTRA domain BSQ44_19915 PF02608 ABC transporter substrate-binding protein PnrA-like BSQ44_19920 PF00005 ABC transporter BSQ44_19925 PF02653 Branched-chain amino acid transport system / permease component BSQ44_19930 PF02653 Branched-chain amino acid transport system / permease component BSQ44_19945 PF01048 Phosphorylase superfamily BSQ44_19950 PF13580 SIS domain BSQ44_19955 PF00171 Aldehyde dehydrogenase family BSQ44_19975 PF13276 HTH-like domain BSQ44_19975 PF13683 Integrase core domain BSQ44_19980 PF01527 Transposase BSQ44_20000 PF13683 Integrase core domain BSQ44_20000 PF13276 HTH-like domain BSQ44_20020 PF00563 EAL domain BSQ44_20020 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_20020 PF08447 PAS fold BSQ44_20020 PF08448 PAS fold BSQ44_20025 PF00563 EAL domain BSQ44_20025 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_20025 PF08448 PAS fold BSQ44_20075 PF00005 ABC transporter BSQ44_20075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_20080 PF00005 ABC transporter BSQ44_20080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_20090 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_20090 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_20095 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_20100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_20105 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_20115 PF01565 FAD binding domain BSQ44_20115 PF02913 FAD linked oxidases, C-terminal domain BSQ44_20135 PF00005 ABC transporter BSQ44_20145 PF04851 Type III restriction enzyme, res subunit BSQ44_20145 PF00271 Helicase conserved C-terminal domain BSQ44_20145 PF08463 EcoEI R protein C-terminal BSQ44_20145 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BSQ44_20155 PF12161 HsdM N-terminal domain BSQ44_20155 PF02384 N-6 DNA Methylase BSQ44_20170 PF00589 Phage integrase family BSQ44_20190 PF00692 dUTPase BSQ44_20195 PF01053 Cys/Met metabolism PLP-dependent enzyme BSQ44_20205 PF01066 CDP-alcohol phosphatidyltransferase BSQ44_20210 PF04379 ApaG domain BSQ44_20215 PF01430 Hsp33 protein BSQ44_20220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BSQ44_20220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BSQ44_20225 PF00202 Aminotransferase class-III BSQ44_20235 PF01895 PhoU domain BSQ44_20240 PF16736 Single Cache-like BSQ44_20240 PF00989 PAS fold BSQ44_20240 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_20240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_20245 PF03976 Polyphosphate kinase 2 (PPK2) BSQ44_20290 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_20300 PF00196 Bacterial regulatory proteins, luxR family BSQ44_20300 PF03472 Autoinducer binding domain BSQ44_20305 PF00497 Bacterial extracellular solute-binding proteins, family 3 BSQ44_20315 PF01921 tRNA synthetases class I (K) BSQ44_20340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSQ44_20340 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_20340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSQ44_20345 PF00563 EAL domain BSQ44_20345 PF17154 Gammaproteobacterial periplasmic sensor domain BSQ44_20345 PF00672 HAMP domain BSQ44_20345 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_20350 PF02803 Thiolase, C-terminal domain BSQ44_20350 PF00108 Thiolase, N-terminal domain BSQ44_20360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_20360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_20360 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_20365 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_20365 PF12806 Acetyl-CoA dehydrogenase C-terminal like BSQ44_20365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_20365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_20370 PF00376 MerR family regulatory protein BSQ44_20370 PF09278 MerR, DNA binding BSQ44_20380 PF01925 Sulfite exporter TauE/SafE BSQ44_20400 PF00270 DEAD/DEAH box helicase BSQ44_20400 PF00271 Helicase conserved C-terminal domain BSQ44_20400 PF08494 DEAD/H associated BSQ44_20405 PF08241 Methyltransferase domain BSQ44_20430 PF07963 Prokaryotic N-terminal methylation motif BSQ44_20430 PF08334 Type II secretion system (T2SS), protein G BSQ44_20435 PF00482 Type II secretion system (T2SS), protein F BSQ44_20470 PF03958 Bacterial type II/III secretion system short domain BSQ44_20470 PF00263 Bacterial type II and III secretion system protein BSQ44_20475 PF00437 Type II/IV secretion system protein BSQ44_20475 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BSQ44_20480 PF01494 FAD binding domain BSQ44_20490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_20530 PF13193 AMP-binding enzyme C-terminal domain BSQ44_20530 PF00501 AMP-binding enzyme BSQ44_20535 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BSQ44_20535 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_20545 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_20555 PF02627 Carboxymuconolactone decarboxylase family BSQ44_20560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_20560 PF03466 LysR substrate binding domain BSQ44_20565 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_20580 PF05853 beta-keto acid cleavage enzyme BSQ44_20585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSQ44_20585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSQ44_20595 PF02653 Branched-chain amino acid transport system / permease component BSQ44_20600 PF00005 ABC transporter BSQ44_20605 PF00005 ABC transporter BSQ44_20605 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_20610 PF13458 Periplasmic binding protein BSQ44_20620 PF01968 Hydantoinase/oxoprolinase BSQ44_20620 PF05378 Hydantoinase/oxoprolinase N-terminal region BSQ44_20625 PF00202 Aminotransferase class-III BSQ44_20645 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_20645 PF01799 [2Fe-2S] binding domain BSQ44_20650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_20650 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_20655 PF03450 CO dehydrogenase flavoprotein C-terminal domain BSQ44_20655 PF00941 FAD binding domain in molybdopterin dehydrogenase BSQ44_20665 PF17149 Periplasmic sensor domain found in signal transduction proteins BSQ44_20665 PF00672 HAMP domain BSQ44_20665 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_20665 PF00072 Response regulator receiver domain BSQ44_20665 PF01627 Hpt domain BSQ44_20665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_20670 PF00072 Response regulator receiver domain BSQ44_20695 PF04679 ATP dependent DNA ligase C terminal region BSQ44_20695 PF01068 ATP dependent DNA ligase domain BSQ44_20695 PF04675 DNA ligase N terminus BSQ44_20710 PF00291 Pyridoxal-phosphate dependent enzyme BSQ44_20715 PF00005 ABC transporter BSQ44_20715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_20730 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_20730 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_20735 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_20740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_20750 PF13193 AMP-binding enzyme C-terminal domain BSQ44_20750 PF00501 AMP-binding enzyme BSQ44_20760 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_20765 PF00342 Phosphoglucose isomerase BSQ44_20770 PF00155 Aminotransferase class I and II BSQ44_20770 PF00392 Bacterial regulatory proteins, gntR family BSQ44_20780 PF00672 HAMP domain BSQ44_20780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_20795 PF00920 Dehydratase family BSQ44_20805 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_20810 PF00027 Cyclic nucleotide-binding domain BSQ44_20810 PF13545 Crp-like helix-turn-helix domain BSQ44_20815 PF00067 Cytochrome P450 BSQ44_20825 PF10609 NUBPL iron-transfer P-loop NTPase BSQ44_20825 PF01883 Iron-sulfur cluster assembly protein BSQ44_20845 PF00171 Aldehyde dehydrogenase family BSQ44_20850 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_20855 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_20860 PF00005 ABC transporter BSQ44_20860 PF08402 TOBE domain BSQ44_20865 PF13416 Bacterial extracellular solute-binding protein BSQ44_20875 PF03466 LysR substrate binding domain BSQ44_20875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_20890 PF16868 NMT1-like family BSQ44_20900 PF03975 CheD chemotactic sensory transduction BSQ44_20905 PF00072 Response regulator receiver domain BSQ44_20910 PF00072 Response regulator receiver domain BSQ44_20910 PF01339 CheB methylesterase BSQ44_20915 PF01739 CheR methyltransferase, SAM binding domain BSQ44_20915 PF03705 CheR methyltransferase, all-alpha domain BSQ44_20920 PF01584 CheW-like domain BSQ44_20925 PF01627 Hpt domain BSQ44_20925 PF02895 Signal transducing histidine kinase, homodimeric domain BSQ44_20925 PF01584 CheW-like domain BSQ44_20925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_20930 PF01584 CheW-like domain BSQ44_20930 PF02895 Signal transducing histidine kinase, homodimeric domain BSQ44_20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_20930 PF01627 Hpt domain BSQ44_20930 PF00072 Response regulator receiver domain BSQ44_20940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_20945 PF00700 Bacterial flagellin C-terminal helical region BSQ44_20945 PF00669 Bacterial flagellin N-terminal helical region BSQ44_20955 PF01061 ABC-2 type transporter BSQ44_20960 PF00005 ABC transporter BSQ44_20965 PF01209 ubiE/COQ5 methyltransferase family BSQ44_20980 PF00120 Glutamine synthetase, catalytic domain BSQ44_20990 PF00355 Rieske [2Fe-2S] domain BSQ44_20995 PF14759 Reductase C-terminal BSQ44_20995 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_21020 PF00149 Calcineurin-like phosphoesterase BSQ44_21025 PF00676 Dehydrogenase E1 component BSQ44_21025 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal BSQ44_21030 PF02779 Transketolase, pyrimidine binding domain BSQ44_21030 PF02780 Transketolase, C-terminal domain BSQ44_21035 PF02817 e3 binding domain BSQ44_21035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BSQ44_21035 PF00364 Biotin-requiring enzyme BSQ44_21040 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_21040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BSQ44_21045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_21050 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_21055 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_21055 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_21060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_21060 PF00005 ABC transporter BSQ44_21065 PF00005 ABC transporter BSQ44_21065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_21075 PF16123 Hydroxyacylglutathione hydrolase C-terminus BSQ44_21075 PF00753 Metallo-beta-lactamase superfamily BSQ44_21085 PF13439 Glycosyltransferase Family 4 BSQ44_21085 PF00534 Glycosyl transferases group 1 BSQ44_21095 PF13439 Glycosyltransferase Family 4 BSQ44_21095 PF00534 Glycosyl transferases group 1 BSQ44_21105 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_21105 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_21110 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_21120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_21120 PF00005 ABC transporter BSQ44_21125 PF00300 Histidine phosphatase superfamily (branch 1) BSQ44_21130 PF00924 Mechanosensitive ion channel BSQ44_21140 PF02543 Carbamoyltransferase N-terminus BSQ44_21140 PF16861 Carbamoyltransferase C-terminus BSQ44_21150 PF02574 Homocysteine S-methyltransferase BSQ44_21150 PF00809 Pterin binding enzyme BSQ44_21150 PF02965 Vitamin B12 dependent methionine synthase, activation domain BSQ44_21150 PF02607 B12 binding domain BSQ44_21150 PF02310 B12 binding domain BSQ44_21165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BSQ44_21165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BSQ44_21175 PF17912 MalK OB fold domain BSQ44_21175 PF00005 ABC transporter BSQ44_21180 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_21185 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_21190 PF01547 Bacterial extracellular solute-binding protein BSQ44_21200 PF00196 Bacterial regulatory proteins, luxR family BSQ44_21200 PF03472 Autoinducer binding domain BSQ44_21215 PF01312 FlhB HrpN YscU SpaS Family BSQ44_21220 PF01706 FliG C-terminal domain BSQ44_21220 PF14841 FliG middle domain BSQ44_21220 PF14842 FliG N-terminal domain BSQ44_21225 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BSQ44_21235 PF01618 MotA/TolQ/ExbB proton channel family BSQ44_21245 PF00460 Flagella basal body rod protein BSQ44_21245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSQ44_21250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BSQ44_21250 PF18269 T3SS EscN ATPase C-terminal domain BSQ44_21260 PF00460 Flagella basal body rod protein BSQ44_21265 PF00460 Flagella basal body rod protein BSQ44_21265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSQ44_21270 PF02049 Flagellar hook-basal body complex protein FliE BSQ44_21275 PF00460 Flagella basal body rod protein BSQ44_21275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSQ44_21280 PF13144 Chaperone for flagella basal body P-ring formation BSQ44_21285 PF02119 Flagellar P-ring protein BSQ44_21295 PF02107 Flagellar L-ring protein BSQ44_21305 PF00813 FliP family BSQ44_21310 PF00669 Bacterial flagellin N-terminal helical region BSQ44_21310 PF00700 Bacterial flagellin C-terminal helical region BSQ44_21315 PF00669 Bacterial flagellin N-terminal helical region BSQ44_21315 PF00700 Bacterial flagellin C-terminal helical region BSQ44_21320 PF01514 Secretory protein of YscJ/FliF family BSQ44_21320 PF08345 Flagellar M-ring protein C-terminal BSQ44_21330 PF13677 Membrane MotB of proton-channel complex MotA/MotB BSQ44_21330 PF00691 OmpA family BSQ44_21350 PF00486 Transcriptional regulatory protein, C terminal BSQ44_21355 PF00460 Flagella basal body rod protein BSQ44_21355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSQ44_21355 PF07559 Flagellar basal body protein FlaE BSQ44_21360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BSQ44_21360 PF07196 Flagellin hook IN motif BSQ44_21370 PF07309 Flagellar protein FlaF BSQ44_21375 PF07378 Flagellar protein FlbT BSQ44_21380 PF03963 Flagellar hook capping protein - N-terminal region BSQ44_21385 PF01313 Bacterial export proteins, family 3 BSQ44_21390 PF00771 FHIPEP family BSQ44_21395 PF01311 Bacterial export proteins, family 1 BSQ44_21420 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_21425 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_21435 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_21455 PF00550 Phosphopantetheine attachment site BSQ44_21455 PF07993 Male sterility protein BSQ44_21455 PF00501 AMP-binding enzyme BSQ44_21465 PF13683 Integrase core domain BSQ44_21465 PF13276 HTH-like domain BSQ44_21470 PF01527 Transposase BSQ44_21480 PF10503 Esterase PHB depolymerase BSQ44_21485 PF18011 C-terminal domain found in long catalases BSQ44_21485 PF00199 Catalase BSQ44_21485 PF06628 Catalase-related immune-responsive BSQ44_21490 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_21490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_21490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_21510 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BSQ44_21510 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BSQ44_21520 PF07995 Glucose / Sorbosone dehydrogenase BSQ44_21525 PF08681 Protein of unknown function (DUF1778) BSQ44_21535 PF01425 Amidase BSQ44_21550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_21550 PF03466 LysR substrate binding domain BSQ44_21575 PF01370 NAD dependent epimerase/dehydratase family BSQ44_21590 PF01545 Cation efflux family BSQ44_21605 PF01850 PIN domain BSQ44_21610 PF00155 Aminotransferase class I and II BSQ44_21615 PF02080 TrkA-C domain BSQ44_21615 PF03600 Citrate transporter BSQ44_21650 PF17773 UPF0176 acylphosphatase like domain BSQ44_21650 PF00581 Rhodanese-like domain BSQ44_21655 PF08291 Peptidase M15 BSQ44_21655 PF01471 Putative peptidoglycan binding domain BSQ44_21660 PF01081 KDPG and KHG aldolase BSQ44_21670 PF00158 Sigma-54 interaction domain BSQ44_21670 PF02954 Bacterial regulatory protein, Fis family BSQ44_21670 PF00072 Response regulator receiver domain BSQ44_21700 PF00920 Dehydratase family BSQ44_21705 PF16653 Saccharopine dehydrogenase C-terminal domain BSQ44_21705 PF03435 Saccharopine dehydrogenase NADP binding domain BSQ44_21715 PF04298 Putative neutral zinc metallopeptidase BSQ44_21735 PF00762 Ferrochelatase BSQ44_21745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BSQ44_21745 PF08447 PAS fold BSQ44_21745 PF13426 PAS domain BSQ44_21755 PF16200 C-terminal region of band_7 BSQ44_21755 PF01145 SPFH domain / Band 7 family BSQ44_21765 PF00571 CBS domain BSQ44_21765 PF01380 SIS domain BSQ44_21775 PF00483 Nucleotidyl transferase BSQ44_21780 PF13406 Transglycosylase SLT domain BSQ44_21795 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BSQ44_21795 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_21805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BSQ44_21810 PF01645 Conserved region in glutamate synthase BSQ44_21810 PF01493 GXGXG motif BSQ44_21810 PF00310 Glutamine amidotransferases class-II BSQ44_21810 PF04898 Glutamate synthase central domain BSQ44_21815 PF01212 Beta-eliminating lyase BSQ44_21825 PF05114 Protein of unknown function (DUF692) BSQ44_21840 PF00011 Hsp20/alpha crystallin family BSQ44_21860 PF00459 Inositol monophosphatase family BSQ44_21870 PF00072 Response regulator receiver domain BSQ44_21880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_21880 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_21880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_21895 PF00005 ABC transporter BSQ44_21895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_21900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_21900 PF00005 ABC transporter BSQ44_21910 PF00356 Bacterial regulatory proteins, lacI family BSQ44_21915 PF00171 Aldehyde dehydrogenase family BSQ44_21920 PF00202 Aminotransferase class-III BSQ44_21930 PF00850 Histone deacetylase domain BSQ44_21935 PF00682 HMGL-like BSQ44_21940 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_21945 PF02615 Malate/L-lactate dehydrogenase BSQ44_21950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_21950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_21950 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_21955 PF02515 CoA-transferase family III BSQ44_21960 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_21965 PF00107 Zinc-binding dehydrogenase BSQ44_21965 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_21985 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_21990 PF02515 CoA-transferase family III BSQ44_21995 PF02515 CoA-transferase family III BSQ44_22000 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22000 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_22005 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_22020 PF16868 NMT1-like family BSQ44_22035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_22040 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22045 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_22045 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22050 PF00005 ABC transporter BSQ44_22050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_22055 PF00005 ABC transporter BSQ44_22055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_22075 PF02515 CoA-transferase family III BSQ44_22080 PF07687 Peptidase dimerisation domain BSQ44_22080 PF01546 Peptidase family M20/M25/M40 BSQ44_22085 PF02423 Ornithine cyclodeaminase/mu-crystallin family BSQ44_22090 PF01425 Amidase BSQ44_22095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_22095 PF03466 LysR substrate binding domain BSQ44_22100 PF13419 Haloacid dehalogenase-like hydrolase BSQ44_22105 PF00834 Ribulose-phosphate 3 epimerase family BSQ44_22110 PF08402 TOBE domain BSQ44_22110 PF00005 ABC transporter BSQ44_22115 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22120 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22130 PF00465 Iron-containing alcohol dehydrogenase BSQ44_22140 PF00171 Aldehyde dehydrogenase family BSQ44_22155 PF00120 Glutamine synthetase, catalytic domain BSQ44_22160 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_22165 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_22175 PF13533 Biotin-lipoyl like BSQ44_22180 PF00873 AcrB/AcrD/AcrF family BSQ44_22185 PF00005 ABC transporter BSQ44_22185 PF12848 ABC transporter BSQ44_22195 PF00501 AMP-binding enzyme BSQ44_22200 PF00005 ABC transporter BSQ44_22205 PF00005 ABC transporter BSQ44_22205 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_22215 PF02653 Branched-chain amino acid transport system / permease component BSQ44_22225 PF00698 Acyl transferase domain BSQ44_22225 PF00107 Zinc-binding dehydrogenase BSQ44_22225 PF16197 Ketoacyl-synthetase C-terminal extension BSQ44_22225 PF00109 Beta-ketoacyl synthase, N-terminal domain BSQ44_22225 PF02801 Beta-ketoacyl synthase, C-terminal domain BSQ44_22225 PF08659 KR domain BSQ44_22225 PF00550 Phosphopantetheine attachment site BSQ44_22225 PF14765 Polyketide synthase dehydratase BSQ44_22225 PF08240 Alcohol dehydrogenase GroES-like domain BSQ44_22230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_22230 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_22230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_22235 PF00440 Bacterial regulatory proteins, tetR family BSQ44_22245 PF01575 MaoC like domain BSQ44_22260 PF04268 Sarcosine oxidase, gamma subunit family BSQ44_22265 PF01571 Aminomethyltransferase folate-binding domain BSQ44_22265 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_22265 PF07992 Pyridine nucleotide-disulphide oxidoreductase BSQ44_22265 PF17806 Sarcosine oxidase A3 domain BSQ44_22280 PF01266 FAD dependent oxidoreductase BSQ44_22295 PF01165 Ribosomal protein S21 BSQ44_22315 PF02233 NAD(P) transhydrogenase beta subunit BSQ44_22320 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BSQ44_22340 PF00005 ABC transporter BSQ44_22355 PF02653 Branched-chain amino acid transport system / permease component BSQ44_22360 PF12399 Branched-chain amino acid ATP-binding cassette transporter BSQ44_22360 PF00005 ABC transporter BSQ44_22365 PF13193 AMP-binding enzyme C-terminal domain BSQ44_22365 PF00501 AMP-binding enzyme BSQ44_22380 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_22380 PF08447 PAS fold BSQ44_22380 PF08448 PAS fold BSQ44_22380 PF00563 EAL domain BSQ44_22400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_22405 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_22410 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_22415 PF07722 Peptidase C26 BSQ44_22425 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_22425 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_22435 PF00356 Bacterial regulatory proteins, lacI family BSQ44_22445 PF01047 MarR family BSQ44_22450 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSQ44_22450 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSQ44_22470 PF03167 Uracil DNA glycosylase superfamily BSQ44_22475 PF05161 MOFRL family BSQ44_22475 PF13660 Domain of unknown function (DUF4147) BSQ44_22480 PF01261 Xylose isomerase-like TIM barrel BSQ44_22485 PF03928 Haem-degrading BSQ44_22490 PF03473 MOSC domain BSQ44_22490 PF03475 3-alpha domain BSQ44_22495 PF01979 Amidohydrolase family BSQ44_22505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_22505 PF03466 LysR substrate binding domain BSQ44_22525 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BSQ44_22525 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BSQ44_22530 PF01799 [2Fe-2S] binding domain BSQ44_22530 PF00111 2Fe-2S iron-sulfur cluster binding domain BSQ44_22535 PF00576 HIUase/Transthyretin family BSQ44_22540 PF09349 OHCU decarboxylase BSQ44_22540 PF01014 Uricase BSQ44_22545 PF05899 Protein of unknown function (DUF861) BSQ44_22545 PF07883 Cupin domain BSQ44_22550 PF04115 Ureidoglycolate lyase BSQ44_22560 PF15723 Motility quorum-sensing regulator, toxin of MqsA BSQ44_22565 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BSQ44_22570 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BSQ44_22570 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BSQ44_22575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_22580 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22585 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_22585 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_22590 PF00005 ABC transporter BSQ44_22595 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BSQ44_22600 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BSQ44_22605 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BSQ44_22605 PF01676 Metalloenzyme superfamily BSQ44_22620 PF07859 alpha/beta hydrolase fold BSQ44_22625 PF00378 Enoyl-CoA hydratase/isomerase BSQ44_22640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BSQ44_22640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BSQ44_22640 PF02770 Acyl-CoA dehydrogenase, middle domain BSQ44_22645 PF00884 Sulfatase BSQ44_22650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSQ44_22650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSQ44_22660 PF05853 beta-keto acid cleavage enzyme BSQ44_22665 PF01965 DJ-1/PfpI family BSQ44_22665 PF12833 Helix-turn-helix domain BSQ44_22670 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BSQ44_22680 PF00583 Acetyltransferase (GNAT) family BSQ44_22680 PF13508 Acetyltransferase (GNAT) domain BSQ44_22685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BSQ44_22695 PF02803 Thiolase, C-terminal domain BSQ44_22695 PF00108 Thiolase, N-terminal domain BSQ44_22700 PF01144 Coenzyme A transferase BSQ44_22705 PF01144 Coenzyme A transferase BSQ44_22710 PF09339 IclR helix-turn-helix domain BSQ44_22710 PF01614 Bacterial transcriptional regulator BSQ44_22715 PF13802 Galactose mutarotase-like BSQ44_22715 PF16338 Domain of unknown function (DUF4968) BSQ44_22715 PF17137 Domain of unknown function (DUF5110) BSQ44_22715 PF01055 Glycosyl hydrolases family 31 BSQ44_22720 PF08402 TOBE domain BSQ44_22720 PF00005 ABC transporter BSQ44_22725 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22730 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_22740 PF01232 Mannitol dehydrogenase Rossmann domain BSQ44_22740 PF08125 Mannitol dehydrogenase C-terminal domain BSQ44_22750 PF03786 D-mannonate dehydratase (UxuA) BSQ44_22755 PF03976 Polyphosphate kinase 2 (PPK2) BSQ44_22760 PF01261 Xylose isomerase-like TIM barrel BSQ44_22765 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BSQ44_22765 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BSQ44_22775 PF01810 LysE type translocator BSQ44_22780 PF00561 alpha/beta hydrolase fold BSQ44_22795 PF00072 Response regulator receiver domain BSQ44_22795 PF00486 Transcriptional regulatory protein, C terminal BSQ44_22800 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_22800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_22800 PF08521 Two-component sensor kinase N-terminal BSQ44_22835 PF01551 Peptidase family M23 BSQ44_22840 PF01476 LysM domain BSQ44_22840 PF03734 L,D-transpeptidase catalytic domain BSQ44_22870 PF00892 EamA-like transporter family BSQ44_22875 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_22875 PF02861 Clp amino terminal domain, pathogenicity island component BSQ44_22875 PF10431 C-terminal, D2-small domain, of ClpB protein BSQ44_22875 PF07724 AAA domain (Cdc48 subfamily) BSQ44_22875 PF17871 AAA lid domain BSQ44_22885 PF17827 PrmC N-terminal domain BSQ44_22885 PF05175 Methyltransferase small domain BSQ44_22890 PF00472 RF-1 domain BSQ44_22890 PF03462 PCRF domain BSQ44_22905 PF00391 PEP-utilising enzyme, mobile domain BSQ44_22905 PF02896 PEP-utilising enzyme, TIM barrel domain BSQ44_22905 PF05524 PEP-utilising enzyme, N-terminal BSQ44_22905 PF01590 GAF domain BSQ44_22910 PF13840 ACT domain BSQ44_22910 PF00696 Amino acid kinase family BSQ44_22910 PF01842 ACT domain BSQ44_22930 PF01850 PIN domain BSQ44_22950 PF00795 Carbon-nitrogen hydrolase BSQ44_22955 PF00462 Glutaredoxin BSQ44_22965 PF08241 Methyltransferase domain BSQ44_22980 PF00293 NUDIX domain BSQ44_22985 PF00583 Acetyltransferase (GNAT) family BSQ44_22990 PF01960 ArgJ family BSQ44_23000 PF01043 SecA preprotein cross-linking domain BSQ44_23000 PF02810 SEC-C motif BSQ44_23000 PF07516 SecA Wing and Scaffold domain BSQ44_23000 PF07517 SecA DEAD-like domain BSQ44_23020 PF13193 AMP-binding enzyme C-terminal domain BSQ44_23020 PF00501 AMP-binding enzyme BSQ44_23030 PF09335 SNARE associated Golgi protein BSQ44_23050 PF00749 tRNA synthetases class I (E and Q), catalytic domain BSQ44_23060 PF00892 EamA-like transporter family BSQ44_23070 PF00106 short chain dehydrogenase BSQ44_23080 PF01923 Cobalamin adenosyltransferase BSQ44_23100 PF01012 Electron transfer flavoprotein domain BSQ44_23105 PF00766 Electron transfer flavoprotein FAD-binding domain BSQ44_23105 PF01012 Electron transfer flavoprotein domain BSQ44_23110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BSQ44_23110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BSQ44_23115 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_23120 PF00563 EAL domain BSQ44_23120 PF01590 GAF domain BSQ44_23120 PF00360 Phytochrome region BSQ44_23120 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_23125 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BSQ44_23125 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BSQ44_23130 PF00072 Response regulator receiver domain BSQ44_23135 PF00156 Phosphoribosyl transferase domain BSQ44_23145 PF00005 ABC transporter BSQ44_23185 PF02153 Prephenate dehydrogenase BSQ44_23190 PF00155 Aminotransferase class I and II BSQ44_23195 PF00561 alpha/beta hydrolase fold BSQ44_23210 PF01209 ubiE/COQ5 methyltransferase family BSQ44_23215 PF00753 Metallo-beta-lactamase superfamily BSQ44_23215 PF16123 Hydroxyacylglutathione hydrolase C-terminus BSQ44_23240 PF00830 Ribosomal L28 family BSQ44_23265 PF11775 Cobalamin biosynthesis protein CobT VWA domain BSQ44_23265 PF06213 Cobalamin biosynthesis protein CobT BSQ44_23280 PF07728 AAA domain (dynein-related subfamily) BSQ44_23280 PF08406 CbbQ/NirQ/NorQ C-terminal BSQ44_23280 PF12556 Cobaltochelatase CobS subunit N terminal BSQ44_23285 PF00226 DnaJ domain BSQ44_23290 PF01722 BolA-like protein BSQ44_23305 PF00571 CBS domain BSQ44_23305 PF03471 Transporter associated domain BSQ44_23305 PF01595 Cyclin M transmembrane N-terminal domain BSQ44_23310 PF01761 3-dehydroquinate synthase BSQ44_23315 PF01202 Shikimate kinase BSQ44_23325 PF02899 Phage integrase, N-terminal SAM-like domain BSQ44_23325 PF00589 Phage integrase family BSQ44_23330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BSQ44_23335 PF03734 L,D-transpeptidase catalytic domain BSQ44_23340 PF01206 Sulfurtransferase TusA BSQ44_23340 PF00581 Rhodanese-like domain BSQ44_23345 PF02492 CobW/HypB/UreG, nucleotide-binding domain BSQ44_23345 PF07683 Cobalamin synthesis protein cobW C-terminal domain BSQ44_23350 PF07943 Penicillin-binding protein 5, C-terminal domain BSQ44_23350 PF00768 D-alanyl-D-alanine carboxypeptidase BSQ44_23355 PF07687 Peptidase dimerisation domain BSQ44_23355 PF01546 Peptidase family M20/M25/M40 BSQ44_23370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_23370 PF03466 LysR substrate binding domain BSQ44_23375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BSQ44_23380 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23385 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23385 PF12911 N-terminal TM domain of oligopeptide transport permease C BSQ44_23390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BSQ44_23390 PF00005 ABC transporter BSQ44_23395 PF01425 Amidase BSQ44_23405 PF02608 ABC transporter substrate-binding protein PnrA-like BSQ44_23415 PF02653 Branched-chain amino acid transport system / permease component BSQ44_23420 PF00857 Isochorismatase family BSQ44_23425 PF00005 ABC transporter BSQ44_23430 PF00857 Isochorismatase family BSQ44_23445 PF08402 TOBE domain BSQ44_23445 PF00005 ABC transporter BSQ44_23450 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23455 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23460 PF00202 Aminotransferase class-III BSQ44_23470 PF00285 Citrate synthase, C-terminal domain BSQ44_23475 PF00285 Citrate synthase, C-terminal domain BSQ44_23480 PF00355 Rieske [2Fe-2S] domain BSQ44_23480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) BSQ44_23495 PF00989 PAS fold BSQ44_23495 PF00563 EAL domain BSQ44_23495 PF01590 GAF domain BSQ44_23495 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_23500 PF00486 Transcriptional regulatory protein, C terminal BSQ44_23500 PF00072 Response regulator receiver domain BSQ44_23505 PF00072 Response regulator receiver domain BSQ44_23505 PF00486 Transcriptional regulatory protein, C terminal BSQ44_23520 PF01758 Sodium Bile acid symporter family BSQ44_23525 PF03960 ArsC family BSQ44_23535 PF00689 Cation transporting ATPase, C-terminus BSQ44_23535 PF00690 Cation transporter/ATPase, N-terminus BSQ44_23550 PF13380 CoA binding domain BSQ44_23550 PF13607 Succinyl-CoA ligase like flavodoxin domain BSQ44_23550 PF00583 Acetyltransferase (GNAT) family BSQ44_23560 PF00403 Heavy-metal-associated domain BSQ44_23570 PF00085 Thioredoxin BSQ44_23585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_23585 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_23585 PF00989 PAS fold BSQ44_23590 PF00072 Response regulator receiver domain BSQ44_23590 PF00196 Bacterial regulatory proteins, luxR family BSQ44_23600 PF13545 Crp-like helix-turn-helix domain BSQ44_23600 PF00027 Cyclic nucleotide-binding domain BSQ44_23610 PF13416 Bacterial extracellular solute-binding protein BSQ44_23615 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23620 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23625 PF00005 ABC transporter BSQ44_23635 PF13977 BetI-type transcriptional repressor, C-terminal BSQ44_23635 PF00440 Bacterial regulatory proteins, tetR family BSQ44_23640 PF08241 Methyltransferase domain BSQ44_23650 PF01593 Flavin containing amine oxidoreductase BSQ44_23655 PF01571 Aminomethyltransferase folate-binding domain BSQ44_23655 PF08669 Glycine cleavage T-protein C-terminal barrel domain BSQ44_23665 PF01244 Membrane dipeptidase (Peptidase family M19) BSQ44_23685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BSQ44_23695 PF00781 Diacylglycerol kinase catalytic domain BSQ44_23720 PF13545 Crp-like helix-turn-helix domain BSQ44_23720 PF00027 Cyclic nucleotide-binding domain BSQ44_23730 PF04542 Sigma-70 region 2 BSQ44_23730 PF08281 Sigma-70, region 4 BSQ44_23740 PF00072 Response regulator receiver domain BSQ44_23745 PF13426 PAS domain BSQ44_23745 PF08447 PAS fold BSQ44_23745 PF07536 HWE histidine kinase BSQ44_23760 PF00005 ABC transporter BSQ44_23765 PF02653 Branched-chain amino acid transport system / permease component BSQ44_23770 PF13407 Periplasmic binding protein domain BSQ44_23775 PF00480 ROK family BSQ44_23795 PF00486 Transcriptional regulatory protein, C terminal BSQ44_23795 PF00072 Response regulator receiver domain BSQ44_23800 PF01895 PhoU domain BSQ44_23805 PF00005 ABC transporter BSQ44_23810 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23815 PF00528 Binding-protein-dependent transport system inner membrane component BSQ44_23825 PF00672 HAMP domain BSQ44_23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_23825 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_23825 PF01627 Hpt domain BSQ44_23825 PF00072 Response regulator receiver domain BSQ44_23825 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BSQ44_23830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BSQ44_23830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BSQ44_23830 PF01842 ACT domain BSQ44_23835 PF06610 L-alanine exporter BSQ44_23840 PF00266 Aminotransferase class-V BSQ44_23850 PF13505 Outer membrane protein beta-barrel domain BSQ44_23855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BSQ44_23855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BSQ44_23855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BSQ44_23855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BSQ44_23880 PF05088 Bacterial NAD-glutamate dehydrogenase BSQ44_23890 PF01808 AICARFT/IMPCHase bienzyme BSQ44_23890 PF02142 MGS-like domain BSQ44_23900 PF01189 16S rRNA methyltransferase RsmB/F BSQ44_23900 PF01029 NusB family BSQ44_23905 PF01435 Peptidase family M48 BSQ44_23935 PF16177 Acetyl-coenzyme A synthetase N-terminus BSQ44_23935 PF00501 AMP-binding enzyme BSQ44_23935 PF13193 AMP-binding enzyme C-terminal domain BSQ44_23940 PF06233 Usg-like family BSQ44_23955 PF13277 YmdB-like protein BSQ44_23960 PF03471 Transporter associated domain BSQ44_23960 PF03741 Integral membrane protein TerC family BSQ44_24120 PF00691 OmpA family BSQ44_24135 PF11849 Domain of unknown function (DUF3369) BSQ44_24145 PF01527 Transposase BSQ44_24150 PF13276 HTH-like domain BSQ44_24150 PF00665 Integrase core domain BSQ44_24150 PF13333 Integrase core domain BSQ44_24380 PF08281 Sigma-70, region 4 BSQ44_24380 PF04542 Sigma-70 region 2 BSQ44_24385 PF13683 Integrase core domain BSQ44_24385 PF13276 HTH-like domain BSQ44_24390 PF01527 Transposase BSQ44_24405 PF01507 Phosphoadenosine phosphosulfate reductase family BSQ44_24410 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BSQ44_24415 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BSQ44_24415 PF00361 Proton-conducting membrane transporter BSQ44_24415 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus BSQ44_24420 PF03466 LysR substrate binding domain BSQ44_24420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_24460 PF02796 Helix-turn-helix domain of resolvase BSQ44_24460 PF00239 Resolvase, N terminal domain BSQ44_24465 PF00144 Beta-lactamase BSQ44_24485 PF00665 Integrase core domain BSQ44_24485 PF13333 Integrase core domain BSQ44_24485 PF13276 HTH-like domain BSQ44_24490 PF01527 Transposase BSQ44_24515 PF08448 PAS fold BSQ44_24515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_24515 PF13188 PAS domain BSQ44_24515 PF00072 Response regulator receiver domain BSQ44_24515 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_24520 PF12697 Alpha/beta hydrolase family BSQ44_24525 PF01527 Transposase BSQ44_24530 PF13276 HTH-like domain BSQ44_24530 PF00665 Integrase core domain BSQ44_24530 PF13333 Integrase core domain BSQ44_24540 PF07536 HWE histidine kinase BSQ44_24540 PF08447 PAS fold BSQ44_24540 PF13426 PAS domain BSQ44_24550 PF00990 Diguanylate cyclase, GGDEF domain BSQ44_24560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_24560 PF13426 PAS domain BSQ44_24560 PF00072 Response regulator receiver domain BSQ44_24565 PF03466 LysR substrate binding domain BSQ44_24565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_24595 PF16925 Tetracyclin repressor-like, C-terminal domain BSQ44_24595 PF00440 Bacterial regulatory proteins, tetR family BSQ44_24600 PF09335 SNARE associated Golgi protein BSQ44_24605 PF01527 Transposase BSQ44_24610 PF13683 Integrase core domain BSQ44_24610 PF13276 HTH-like domain BSQ44_24615 PF07536 HWE histidine kinase BSQ44_24615 PF13581 Histidine kinase-like ATPase domain BSQ44_24615 PF13426 PAS domain BSQ44_24645 PF01970 Tripartite tricarboxylate transporter TctA family BSQ44_24650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BSQ44_24650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BSQ44_24650 PF00205 Thiamine pyrophosphate enzyme, central domain BSQ44_24655 PF03401 Tripartite tricarboxylate transporter family receptor BSQ44_24660 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BSQ44_24665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_24665 PF03466 LysR substrate binding domain BSQ44_24670 PF00694 Aconitase C-terminal domain BSQ44_24670 PF00330 Aconitase family (aconitate hydratase) BSQ44_24680 PF03466 LysR substrate binding domain BSQ44_24680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_24685 PF14537 Cytochrome c3 BSQ44_24685 PF00890 FAD binding domain BSQ44_24700 PF03737 Aldolase/RraA BSQ44_24705 PF00180 Isocitrate/isopropylmalate dehydrogenase BSQ44_24705 PF03737 Aldolase/RraA BSQ44_24710 PF01380 SIS domain BSQ44_24715 PF01370 NAD dependent epimerase/dehydratase family BSQ44_24720 PF00171 Aldehyde dehydrogenase family BSQ44_24730 PF03737 Aldolase/RraA BSQ44_24735 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_24745 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_24755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_24755 PF03466 LysR substrate binding domain BSQ44_24760 PF14537 Cytochrome c3 BSQ44_24760 PF00890 FAD binding domain BSQ44_24765 PF00171 Aldehyde dehydrogenase family BSQ44_24780 PF13378 Enolase C-terminal domain-like BSQ44_24780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_24785 PF05199 GMC oxidoreductase BSQ44_24785 PF00732 GMC oxidoreductase BSQ44_24790 PF00171 Aldehyde dehydrogenase family BSQ44_24810 PF07859 alpha/beta hydrolase fold BSQ44_24815 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BSQ44_24815 PF00890 FAD binding domain BSQ44_24820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_24830 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_24860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BSQ44_24865 PF01699 Sodium/calcium exchanger protein BSQ44_24880 PF00004 ATPase family associated with various cellular activities (AAA) BSQ44_24880 PF17862 AAA+ lid domain BSQ44_24880 PF06480 FtsH Extracellular BSQ44_24880 PF01434 Peptidase family M41 BSQ44_24885 PF01171 PP-loop family BSQ44_24895 PF00691 OmpA family BSQ44_24900 PF04052 TolB amino-terminal domain BSQ44_24900 PF07676 WD40-like Beta Propeller Repeat BSQ44_24910 PF02472 Biopolymer transport protein ExbD/TolR BSQ44_24915 PF01618 MotA/TolQ/ExbB proton channel family BSQ44_24920 PF03061 Thioesterase superfamily BSQ44_24935 PF17864 RuvB AAA lid domain BSQ44_24935 PF05496 Holliday junction DNA helicase RuvB P-loop domain BSQ44_24935 PF05491 RuvB C-terminal winged helix domain BSQ44_24940 PF01330 RuvA N terminal domain BSQ44_24940 PF07499 RuvA, C-terminal domain BSQ44_24955 PF02075 Crossover junction endodeoxyribonuclease RuvC BSQ44_24975 PF00501 AMP-binding enzyme BSQ44_24975 PF13193 AMP-binding enzyme C-terminal domain BSQ44_25010 PF08207 Elongation factor P (EF-P) KOW-like domain BSQ44_25010 PF09285 Elongation factor P, C-terminal BSQ44_25010 PF01132 Elongation factor P (EF-P) OB domain BSQ44_25015 PF00459 Inositol monophosphatase family BSQ44_25025 PF07690 Major Facilitator Superfamily BSQ44_25030 PF00873 AcrB/AcrD/AcrF family BSQ44_25045 PF04551 GcpE protein BSQ44_25055 PF00672 HAMP domain BSQ44_25055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_25055 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_25055 PF01627 Hpt domain BSQ44_25055 PF00072 Response regulator receiver domain BSQ44_25055 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BSQ44_25060 PF00348 Polyprenyl synthetase BSQ44_25065 PF00912 Transglycosylase BSQ44_25070 PF01783 Ribosomal L32p protein family BSQ44_25090 PF07879 PHB/PHA accumulation regulator DNA-binding domain BSQ44_25090 PF05233 PHB accumulation regulatory domain BSQ44_25095 PF00108 Thiolase, N-terminal domain BSQ44_25095 PF02803 Thiolase, C-terminal domain BSQ44_25110 PF04055 Radical SAM superfamily BSQ44_25120 PF06803 Protein of unknown function (DUF1232) BSQ44_25125 PF01329 Pterin 4 alpha carbinolamine dehydratase BSQ44_25135 PF13472 GDSL-like Lipase/Acylhydrolase family BSQ44_25140 PF00005 ABC transporter BSQ44_25150 PF01027 Inhibitor of apoptosis-promoting Bax1 BSQ44_25180 PF03466 LysR substrate binding domain BSQ44_25180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_25185 PF00211 Adenylate and Guanylate cyclase catalytic domain BSQ44_25185 PF00072 Response regulator receiver domain BSQ44_25200 PF03480 Bacterial extracellular solute-binding protein, family 7 BSQ44_25210 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BSQ44_25215 PF13378 Enolase C-terminal domain-like BSQ44_25215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BSQ44_25220 PF02601 Exonuclease VII, large subunit BSQ44_25220 PF13742 OB-fold nucleic acid binding domain BSQ44_25230 PF00330 Aconitase family (aconitate hydratase) BSQ44_25230 PF00694 Aconitase C-terminal domain BSQ44_25240 PF00005 ABC transporter BSQ44_25245 PF03379 CcmB protein BSQ44_25255 PF01578 Cytochrome C assembly protein BSQ44_25265 PF08534 Redoxin BSQ44_25270 PF08279 HTH domain BSQ44_25270 PF13280 WYL domain BSQ44_25285 PF04279 Intracellular septation protein A BSQ44_25315 PF17969 L,D-transpeptidase C-terminal domain BSQ44_25315 PF01476 LysM domain BSQ44_25315 PF03734 L,D-transpeptidase catalytic domain BSQ44_25330 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BSQ44_25345 PF00376 MerR family regulatory protein BSQ44_25345 PF09278 MerR, DNA binding BSQ44_25350 PF01566 Natural resistance-associated macrophage protein BSQ44_25365 PF00072 Response regulator receiver domain BSQ44_25365 PF00486 Transcriptional regulatory protein, C terminal BSQ44_25370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_25370 PF00672 HAMP domain BSQ44_25370 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_25375 PF01527 Transposase BSQ44_25380 PF13683 Integrase core domain BSQ44_25380 PF13276 HTH-like domain BSQ44_25385 PF01545 Cation efflux family BSQ44_25385 PF16916 Dimerisation domain of Zinc Transporter BSQ44_25390 PF01145 SPFH domain / Band 7 family BSQ44_25395 PF01145 SPFH domain / Band 7 family BSQ44_25405 PF00403 Heavy-metal-associated domain BSQ44_25415 PF02630 SCO1/SenC BSQ44_25420 PF02600 Disulfide bond formation protein DsbB BSQ44_25435 PF05425 Copper resistance protein D BSQ44_25440 PF13683 Integrase core domain BSQ44_25440 PF13276 HTH-like domain BSQ44_25445 PF01527 Transposase BSQ44_25460 PF02630 SCO1/SenC BSQ44_25515 PF18480 Domain of unknown function (DUF5615) BSQ44_25655 PF05406 WGR domain BSQ44_25705 PF01381 Helix-turn-helix BSQ44_25730 PF02534 Type IV secretory system Conjugative DNA transfer BSQ44_25735 PF00437 Type II/IV secretion system protein BSQ44_25740 PF03743 Bacterial conjugation TrbI-like protein BSQ44_25745 PF03524 Conjugal transfer protein BSQ44_25770 PF01464 Transglycosylase SLT domain BSQ44_25785 PF04956 TrbC/VIRB2 family BSQ44_25790 PF01464 Transglycosylase SLT domain BSQ44_25835 PF00512 His Kinase A (phospho-acceptor) domain BSQ44_25835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BSQ44_25840 PF13614 AAA domain BSQ44_25840 PF00376 MerR family regulatory protein BSQ44_25850 PF11800 Replication protein C C-terminal region BSQ44_25850 PF03428 Replication protein C N-terminal domain BSQ44_25860 PF01850 PIN domain BSQ44_25880 PF04079 Segregation and condensation complex subunit ScpB BSQ44_25895 PF02082 Transcriptional regulator BSQ44_25910 PF02082 Transcriptional regulator BSQ44_25940 PF08534 Redoxin BSQ44_25960 PF06965 Na+/H+ antiporter 1 BSQ44_25960 PF13462 Thioredoxin BSQ44_25965 PF02683 Cytochrome C biogenesis protein transmembrane region BSQ44_25990 PF00115 Cytochrome C and Quinol oxidase polypeptide I BSQ44_26000 PF00034 Cytochrome c BSQ44_26000 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BSQ44_26000 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BSQ44_26010 PF00034 Cytochrome c BSQ44_26025 PF02371 Transposase IS116/IS110/IS902 family BSQ44_26025 PF01548 Transposase BSQ44_26055 PF03466 LysR substrate binding domain BSQ44_26055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BSQ44_26065 PF01464 Transglycosylase SLT domain BSQ44_26065 PF10145 Phage-related minor tail protein BSQ44_26065 PF01551 Peptidase family M23 BSQ44_26070 PF05443 ROS/MUCR transcriptional regulator protein BSQ44_26090 PF01527 Transposase BSQ44_26095 PF05717 IS66 Orf2 like protein BSQ44_26100 PF03050 Transposase IS66 family BSQ44_26100 PF13817 IS66 C-terminal element BSQ44_26100 PF13007 Transposase C of IS166 homeodomain BSQ44_26100 PF13005 zinc-finger binding domain of transposase IS66 BSQ44_26110 PF00403 Heavy-metal-associated domain BSQ44_26120 PF02600 Disulfide bond formation protein DsbB BSQ44_26125 PF02683 Cytochrome C biogenesis protein transmembrane region BSQ44_26135 PF01475 Ferric uptake regulator family BSQ44_26155 PF01252 Signal peptidase (SPase) II BSQ44_26165 PF00795 Carbon-nitrogen hydrolase BSQ44_26170 PF02683 Cytochrome C biogenesis protein transmembrane region BSQ44_26185 PF02659 Putative manganese efflux pump BSQ44_26200 PF00398 Ribosomal RNA adenine dimethylase