locus-tag	class	description
BSQ44_00005	COG0552	protein localization to endoplasmic reticulum
BSQ44_00010	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ44_00015	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BSQ44_00035	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BSQ44_00040	COG0039	L-malate dehydrogenase activity
BSQ44_00045	COG0045	succinate-CoA ligase (ADP-forming) activity
BSQ44_00065	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BSQ44_00070	COG0567	Dehydrogenase, E1 component
BSQ44_00075	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_00080	COG1280	lysine exporter protein (LysE YggA)
BSQ44_00090	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BSQ44_00100	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BSQ44_00105	COG0564	pseudouridine synthase activity
BSQ44_00115	COG0346	lactoylglutathione lyase activity
BSQ44_00120	COG0217	transcriptional regulatory protein
BSQ44_00135	COG4221	oxidoreductase activity
BSQ44_00150	COG1132	(ABC) transporter
BSQ44_00160	COG1473	amidohydrolase
BSQ44_00200	COG1272	protein, Hemolysin III
BSQ44_00210	COG2080	2 iron, 2 sulfur cluster binding
BSQ44_00250	COG0583	DNA-binding transcription factor activity
BSQ44_00255	COG2223	nitrite transmembrane transporter activity
BSQ44_00260	COG0137	argininosuccinate synthase activity
BSQ44_00275	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_00295	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
BSQ44_00300	COG1329	Transcriptional regulator
BSQ44_00305	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BSQ44_00315	COG1960	acyl-CoA dehydrogenase activity
BSQ44_00330	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
BSQ44_00350	COG0488	(ABC) transporter
BSQ44_00380	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ44_00385	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_00420	COG0683	leucine binding
BSQ44_00425	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BSQ44_00445	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BSQ44_00455	COG1872	DUF167
BSQ44_00465	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BSQ44_00475	COG0228	four-way junction DNA binding
BSQ44_00480	COG1605	Chorismate mutase
BSQ44_00480	COG0287	Prephenate dehydrogenase
BSQ44_00485	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BSQ44_00495	COG0456	acetyltransferase
BSQ44_00495	COG1846	Transcriptional regulator
BSQ44_00505	COG1846	Transcriptional regulator
BSQ44_00525	COG1704	LemA family
BSQ44_00550	COG0210	DNA helicase
BSQ44_00555	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BSQ44_00600	COG3654	unkown
BSQ44_00610	COG0481	GTPase activity
BSQ44_00620	COG2832	Protein of unknown function (DUF454)
BSQ44_00635	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_00640	COG0765	amino acid transport
BSQ44_00645	COG2813	Specifically methylates the guanine in position
BSQ44_00660	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BSQ44_00665	COG3706	GGDEF domain
BSQ44_00715	COG3541	Predicted nucleotidyltransferase
BSQ44_00720	COG3132	Protein of unknown function, DUF480
BSQ44_00725	COG2197	response regulator
BSQ44_00735	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_00740	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BSQ44_00745	COG1764	response to oxidative stress
BSQ44_00750	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_00755	COG1946	Acyl-CoA thioesterase
BSQ44_00760	COG0347	Belongs to the P(II) protein family
BSQ44_00765	COG0004	ammonium transporteR
BSQ44_00770	COG2261	transglycosylase associated protein
BSQ44_00770	COG1674	ftsk spoiiie
BSQ44_00775	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BSQ44_00795	COG0745	RESPONSE REGULATOR receiver
BSQ44_00810	COG2264	protein methyltransferase activity
BSQ44_00825	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BSQ44_00830	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BSQ44_00835	COG0181	hydroxymethylbilane synthase activity
BSQ44_00860	COG0519	Catalyzes the synthesis of GMP from XMP
BSQ44_00860	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BSQ44_00870	COG0335	large ribosomal subunit rRNA binding
BSQ44_00875	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_00875	COG1396	sequence-specific DNA binding
BSQ44_00890	COG0336	Belongs to the RNA methyltransferase TrmD family
BSQ44_00895	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BSQ44_00900	COG4974	Belongs to the 'phage' integrase family
BSQ44_00955	COG0517	IMP dehydrogenase activity
BSQ44_00975	COG0129	dihydroxy-acid dehydratase activity
BSQ44_00985	COG4214	carbohydrate transport
BSQ44_01005	COG1879	ABC-type sugar transport system periplasmic component
BSQ44_01010	COG1129	ABC transporter
BSQ44_01015	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_01020	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_01025	COG2186	Transcriptional regulator
BSQ44_01030	COG3734	2-keto-3-deoxy-galactonokinase
BSQ44_01040	COG1082	Xylose isomerase domain protein TIM barrel
BSQ44_01045	COG0673	inositol 2-dehydrogenase activity
BSQ44_01060	COG1082	Xylose isomerase domain protein TIM barrel
BSQ44_01065	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_01075	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_01080	COG3842	ATPase activity
BSQ44_01085	COG3842	ATPase activity
BSQ44_01100	COG1175	transmembrane transport
BSQ44_01115	COG5441	Belongs to the UPF0261 family
BSQ44_01120	COG5564	TIM-barrel signal transduction protein
BSQ44_01135	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BSQ44_01140	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_01140	COG1902	pentaerythritol trinitrate reductase activity
BSQ44_01150	COG5598	trimethylamine methyltransferase
BSQ44_01155	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_01180	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_01180	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_01205	COG3588	fructose-bisphosphate aldolase
BSQ44_01215	COG0126	phosphoglycerate kinase activity
BSQ44_01245	COG3750	Belongs to the UPF0335 family
BSQ44_01255	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BSQ44_01265	COG0463	Glycosyl transferase, family 2
BSQ44_01290	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_01340	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BSQ44_01345	COG0495	leucyl-tRNA aminoacylation
BSQ44_01360	COG3971	2-oxopent-4-enoate hydratase activity
BSQ44_01365	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BSQ44_01390	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BSQ44_01395	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BSQ44_01400	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BSQ44_01405	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BSQ44_01410	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BSQ44_01415	COG0494	nUDIX hydrolase
BSQ44_01425	COG0793	Belongs to the peptidase S41A family
BSQ44_01435	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BSQ44_01440	COG0799	negative regulation of ribosome biogenesis
BSQ44_01450	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BSQ44_01460	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BSQ44_01465	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BSQ44_01470	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BSQ44_01480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_01485	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BSQ44_01490	COG3743	rRNA binding
BSQ44_01490	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BSQ44_01520	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BSQ44_01525	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_01535	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_01545	COG1802	Transcriptional regulator
BSQ44_01550	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BSQ44_01565	COG3335	DDE superfamily endonuclease
BSQ44_01600	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_01620	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_01620	COG0604	alcohol dehydrogenase
BSQ44_01620	COG3321	synthase
BSQ44_01635	COG0640	Transcriptional regulator
BSQ44_01650	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BSQ44_01655	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BSQ44_01660	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BSQ44_01665	COG0457	Tetratricopeptide repeat
BSQ44_01680	COG0469	pyruvate kinase activity
BSQ44_01700	COG1217	gtp-binding protein TYPA
BSQ44_01710	COG1994	Peptidase M50
BSQ44_01710	COG0517	IMP dehydrogenase activity
BSQ44_01735	COG0288	reversible hydration of carbon dioxide
BSQ44_01765	COG3152	Membrane
BSQ44_01770	COG0473	3-isopropylmalate dehydrogenase activity
BSQ44_01785	COG0066	3-isopropylmalate dehydratase activity
BSQ44_01825	COG0587	DNA-directed DNA polymerase activity
BSQ44_01830	COG2835	tetraacyldisaccharide 4'-kinase activity
BSQ44_01835	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BSQ44_01850	COG3971	2-oxopent-4-enoate hydratase activity
BSQ44_01865	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_01890	COG0357	Ribosomal RNA small subunit methyltransferase G
BSQ44_01895	COG0445	tRNA wobble uridine modification
BSQ44_01900	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BSQ44_01905	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BSQ44_01910	COG1981	membrane
BSQ44_01915	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BSQ44_01920	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BSQ44_01925	COG0424	maF-like protein
BSQ44_01930	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BSQ44_01935	COG0237	dephospho-CoA kinase activity
BSQ44_01940	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BSQ44_01945	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
BSQ44_01950	COG3030	protein affecting phage T7 exclusion by the F plasmid
BSQ44_01970	COG1396	sequence-specific DNA binding
BSQ44_01970	COG3800	Transcriptional regulator
BSQ44_01980	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BSQ44_01995	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BSQ44_02000	COG0131	Imidazoleglycerol-phosphate dehydratase
BSQ44_02010	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BSQ44_02015	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BSQ44_02025	COG0107	imidazoleglycerol-phosphate synthase activity
BSQ44_02030	COG0140	phosphoribosyl-ATP diphosphatase activity
BSQ44_02035	COG1072	(Pantothenic acid kinase))
BSQ44_02050	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BSQ44_02055	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_02065	COG1072	(Pantothenic acid kinase))
BSQ44_02080	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_02090	COG0006	proline dipeptidase activity
BSQ44_02095	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_02100	COG1802	Transcriptional regulator
BSQ44_02110	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_02110	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_02120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_02125	COG2721	sulfolactate sulfo-lyase activity
BSQ44_02135	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BSQ44_02140	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BSQ44_02150	COG0443	Heat shock 70 kDa protein
BSQ44_02160	COG0484	heat shock protein binding
BSQ44_02165	COG3963	phosphatidate phosphatase activity
BSQ44_02185	COG0284	orotidine-5'-phosphate decarboxylase activity
BSQ44_02195	COG0454	-acetyltransferase
BSQ44_02195	COG0456	acetyltransferase
BSQ44_02210	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BSQ44_02230	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BSQ44_02235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_02245	COG0071	Belongs to the small heat shock protein (HSP20) family
BSQ44_02255	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ44_02260	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BSQ44_02265	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BSQ44_02270	COG1137	ATPase activity
BSQ44_02275	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BSQ44_02285	COG0616	signal peptide processing
BSQ44_02290	COG0776	regulation of translation
BSQ44_02300	COG2423	ornithine cyclodeaminase activity
BSQ44_02305	COG0116	Belongs to the methyltransferase superfamily
BSQ44_02305	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BSQ44_02315	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BSQ44_02320	COG0604	alcohol dehydrogenase
BSQ44_02335	COG1295	ribonuclease BN
BSQ44_02410	COG2340	Cysteine-rich secretory protein family
BSQ44_02435	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ44_02445	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_02445	COG2010	Cytochrome c
BSQ44_02450	COG2863	cytochrome
BSQ44_02465	COG0668	transmembrane transport
BSQ44_02470	COG0280	phosphate acetyltransferase
BSQ44_02470	COG0281	malic enzyme
BSQ44_02475	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BSQ44_02505	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
BSQ44_02515	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
BSQ44_02520	COG4149	molybdate abc transporter
BSQ44_02525	COG0725	ABC transporter, periplasmic molybdate-binding protein
BSQ44_02540	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BSQ44_02540	COG0072	phenylalanine-tRNA ligase activity
BSQ44_02590	COG4964	Belongs to the GSP D family
BSQ44_02625	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BSQ44_02630	COG0791	NLP P60 protein
BSQ44_02635	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_02640	COG4172	Belongs to the ABC transporter superfamily
BSQ44_02655	COG4239	(ABC) transporter, permease
BSQ44_02660	COG4174	ABC transporter (Permease)
BSQ44_02670	COG4166	transmembrane transport
BSQ44_02680	COG3474	cytochrome
BSQ44_02685	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
BSQ44_02695	COG2816	NAD+ diphosphatase activity
BSQ44_02715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BSQ44_02750	COG1877	trehalose-phosphatase activity
BSQ44_02765	COG0366	Alpha amylase catalytic
BSQ44_02785	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BSQ44_02810	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BSQ44_02830	COG2094	Belongs to the DNA glycosylase MPG family
BSQ44_02835	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_02860	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_02865	COG3387	PFAM Glycoside hydrolase 15-related
BSQ44_02870	COG0519	Catalyzes the synthesis of GMP from XMP
BSQ44_02875	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BSQ44_02890	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BSQ44_02900	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BSQ44_02905	COG2080	2 iron, 2 sulfur cluster binding
BSQ44_02910	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BSQ44_02915	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_02920	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BSQ44_02930	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BSQ44_02935	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_02945	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BSQ44_02955	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_02960	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_02965	COG3845	ABC transporter
BSQ44_02970	COG1454	alcohol dehydrogenase
BSQ44_02980	COG2900	Belongs to the SlyX family
BSQ44_02995	COG1744	ABC transporter substrate-binding protein PnrA-like
BSQ44_03000	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_03010	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BSQ44_03020	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BSQ44_03025	COG5001	Diguanylate cyclase
BSQ44_03030	COG2813	Specifically methylates the guanine in position
BSQ44_03035	COG1185	polyribonucleotide nucleotidyltransferase activity
BSQ44_03040	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BSQ44_03050	COG0598	Magnesium transport protein CorA
BSQ44_03055	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BSQ44_03060	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BSQ44_03065	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BSQ44_03080	COG0779	Required for maturation of 30S ribosomal subunits
BSQ44_03105	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_03110	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_03140	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BSQ44_03150	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BSQ44_03155	COG0268	Binds directly to 16S ribosomal RNA
BSQ44_03165	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_03165	COG1388	LysM domain
BSQ44_03170	COG0366	Alpha amylase catalytic
BSQ44_03185	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BSQ44_03190	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BSQ44_03195	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
BSQ44_03200	COG0728	peptidoglycan biosynthetic process
BSQ44_03215	COG0180	Tryptophanyl-tRNA synthetase
BSQ44_03225	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BSQ44_03230	COG0450	alkyl hydroperoxide reductase
BSQ44_03250	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_03255	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
BSQ44_03265	COG1643	Atp-dependent helicase
BSQ44_03270	COG4136	ATPase activity
BSQ44_03275	COG4135	transport system, permease component
BSQ44_03280	COG4134	Bacterial extracellular solute-binding protein
BSQ44_03290	COG2188	Transcriptional regulator
BSQ44_03295	COG3624	Phosphonate C-P lyase system protein PhnG
BSQ44_03300	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BSQ44_03305	COG3626	phosphonate metabolism
BSQ44_03320	COG3627	carbon phosphorus lyase activity
BSQ44_03325	COG4107	phosphonate C-P lyase system protein PhnK
BSQ44_03330	COG4778	phosphonate C-P lyase system protein PhnL
BSQ44_03340	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
BSQ44_03355	COG3639	organic phosphonate transmembrane transporter activity
BSQ44_03360	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
BSQ44_03365	COG3454	Phosphonate metabolism
BSQ44_03420	COG0693	protein deglycase activity
BSQ44_03425	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BSQ44_03430	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_03435	COG0756	dUTP diphosphatase activity
BSQ44_03450	COG2814	Major facilitator Superfamily
BSQ44_03465	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BSQ44_03470	COG0746	molybdenum cofactor guanylyltransferase activity
BSQ44_03495	COG1968	undecaprenyl-diphosphatase activity
BSQ44_03505	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BSQ44_03515	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
BSQ44_03520	COG1803	Methylglyoxal synthase
BSQ44_03525	COG0837	glucose binding
BSQ44_03530	COG1132	(ABC) transporter
BSQ44_03535	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BSQ44_03540	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BSQ44_03560	COG0840	transmembrane signaling receptor activity
BSQ44_03565	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ44_03570	COG1702	phosphate starvation-inducible protein PhoH
BSQ44_03590	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BSQ44_03595	COG1396	sequence-specific DNA binding
BSQ44_03600	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BSQ44_03605	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BSQ44_03615	COG0019	diaminopimelate decarboxylase activity
BSQ44_03625	COG0165	Argininosuccinate lyase
BSQ44_03630	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BSQ44_03640	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_03640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ44_03645	COG2733	membrane
BSQ44_03660	COG0588	phosphoglycerate mutase activity
BSQ44_03675	COG1309	transcriptional regulator
BSQ44_03685	COG1131	(ABC) transporter
BSQ44_03690	COG0842	Transport permease protein
BSQ44_03700	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_03705	COG1024	Enoyl-CoA hydratase
BSQ44_03715	COG1715	Restriction endonuclease
BSQ44_03855	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ44_03885	COG1475	DNA binding
BSQ44_03995	COG1388	LysM domain
BSQ44_03995	COG0791	NLP P60 protein
BSQ44_04030	COG1238	metal cluster binding
BSQ44_04050	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BSQ44_04055	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BSQ44_04060	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BSQ44_04065	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
BSQ44_04070	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BSQ44_04105	COG0697	spore germination
BSQ44_04125	COG1309	transcriptional regulator
BSQ44_04130	COG0583	DNA-binding transcription factor activity
BSQ44_04145	COG0022	dehydrogenase e1 component
BSQ44_04150	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BSQ44_04160	COG1309	transcriptional regulator
BSQ44_04165	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_04190	COG1609	Transcriptional regulator
BSQ44_04195	COG1960	acyl-CoA dehydrogenase activity
BSQ44_04200	COG1309	transcriptional regulator
BSQ44_04205	COG1024	Enoyl-CoA hydratase
BSQ44_04210	COG2084	Dehydrogenase
BSQ44_04220	COG0697	spore germination
BSQ44_04230	COG3002	Belongs to the UPF0753 family
BSQ44_04245	COG0583	DNA-binding transcription factor activity
BSQ44_04255	COG2030	dehydratase
BSQ44_04265	COG1960	acyl-CoA dehydrogenase activity
BSQ44_04270	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_04280	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_04295	COG1022	Amp-dependent synthetase and ligase
BSQ44_04305	COG1024	Enoyl-CoA hydratase
BSQ44_04350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_04355	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_04355	COG0596	Alpha beta hydrolase
BSQ44_04360	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_04375	COG0784	Response regulator, receiver
BSQ44_04380	COG1396	sequence-specific DNA binding
BSQ44_04385	COG4166	transmembrane transport
BSQ44_04390	COG0601	transmembrane transport
BSQ44_04395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_04400	COG0444	Belongs to the ABC transporter superfamily
BSQ44_04405	COG4608	Belongs to the ABC transporter superfamily
BSQ44_04420	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
BSQ44_04420	COG0146	N-methylhydantoinase B acetone carboxylase alpha subunit
BSQ44_04450	COG2079	MmgE PrpD family protein
BSQ44_04465	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_04470	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_04475	COG1802	Transcriptional regulator
BSQ44_04485	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_04495	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_04510	COG0583	DNA-binding transcription factor activity
BSQ44_04515	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_04525	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BSQ44_04530	COG0418	dihydroorotase activity
BSQ44_04535	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_04540	COG4603	Belongs to the binding-protein-dependent transport system permease family
BSQ44_04545	COG3845	ABC transporter
BSQ44_04560	COG0628	permease
BSQ44_04570	COG0671	phosphoesterase, PA-phosphatase related
BSQ44_04620	COG3568	Endonuclease Exonuclease Phosphatase
BSQ44_04630	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BSQ44_04635	COG2032	superoxide dismutase activity
BSQ44_04670	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_04695	COG0747	negative chemotaxis
BSQ44_04700	COG2186	Transcriptional regulator
BSQ44_04710	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_04720	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_04730	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_04750	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_04760	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_04770	COG1129	ABC transporter
BSQ44_04775	COG0037	tRNA processing
BSQ44_04775	COG0590	tRNA wobble adenosine to inosine editing
BSQ44_04820	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BSQ44_04825	COG0628	permease
BSQ44_04835	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_04840	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BSQ44_04845	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BSQ44_04875	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BSQ44_04880	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BSQ44_04885	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BSQ44_04890	COG0110	maltose O-acetyltransferase activity
BSQ44_04895	COG0706	membrane insertase activity
BSQ44_04900	COG0594	ribonuclease P activity
BSQ44_04905	COG0230	Belongs to the bacterial ribosomal protein bL34 family
BSQ44_04935	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_04940	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_04945	COG1177	transmembrane transport
BSQ44_04960	COG3842	ATPase activity
BSQ44_04980	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BSQ44_05000	COG0242	peptide deformylase activity
BSQ44_05010	COG1487	ribonuclease activity
BSQ44_05015	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BSQ44_05025	COG0101	tRNA pseudouridine synthase activity
BSQ44_05035	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_05045	COG2171	N-acyltransferase activity
BSQ44_05060	COG3706	GGDEF domain
BSQ44_05070	COG0477	Major facilitator Superfamily
BSQ44_05085	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BSQ44_05135	COG3685	Protein conserved in bacteria
BSQ44_05140	COG1116	anion transmembrane transporter activity
BSQ44_05145	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_05160	COG0667	Aldo Keto reductase
BSQ44_05165	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BSQ44_05175	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_05180	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
BSQ44_05185	COG2186	Transcriptional regulator
BSQ44_05200	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_05205	COG1904	glucuronate isomerase
BSQ44_05210	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BSQ44_05220	COG3386	PFAM SMP-30 Gluconolaconase
BSQ44_05225	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_05230	COG5001	Diguanylate cyclase
BSQ44_05235	COG0189	ligase activity
BSQ44_05265	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BSQ44_05270	COG0745	RESPONSE REGULATOR receiver
BSQ44_05275	COG2205	protein histidine kinase activity
BSQ44_05285	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BSQ44_05285	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ44_05295	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
BSQ44_05305	COG3178	'Phosphotransferase
BSQ44_05310	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
BSQ44_05315	COG2887	Belongs to the helicase family. UvrD subfamily
BSQ44_05320	COG1074	ATP-dependent DNA helicase activity
BSQ44_05340	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BSQ44_05345	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BSQ44_05350	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BSQ44_05360	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BSQ44_05385	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BSQ44_05400	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BSQ44_05410	COG0133	tryptophan synthase activity
BSQ44_05425	COG0159	tryptophan synthase activity
BSQ44_05430	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BSQ44_05435	COG0285	dihydrofolate synthase activity
BSQ44_05465	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ44_05485	COG0659	secondary active sulfate transmembrane transporter activity
BSQ44_05515	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ44_05520	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_05525	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BSQ44_05550	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_05565	COG0410	ABC transporter
BSQ44_05590	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BSQ44_05590	COG1648	precorrin-2 dehydrogenase activity
BSQ44_05600	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BSQ44_05605	COG0175	sulfate reduction
BSQ44_05635	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_05650	COG2860	membrane
BSQ44_05655	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BSQ44_05660	COG1420	regulation of RNA biosynthetic process
BSQ44_05665	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BSQ44_05675	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BSQ44_05680	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BSQ44_05685	COG3237	CsbD-like
BSQ44_05690	COG0539	negative regulation of cytoplasmic translation
BSQ44_05695	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BSQ44_05705	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_05710	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BSQ44_05715	COG3842	ATPase activity
BSQ44_05720	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_05725	COG1177	transmembrane transport
BSQ44_05740	COG0154	amidase activity
BSQ44_05750	COG0840	transmembrane signaling receptor activity
BSQ44_05765	COG2801	Transposase and inactivated derivatives
BSQ44_05790	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BSQ44_05845	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ44_05850	COG0829	nickel cation binding
BSQ44_05855	COG0831	urea catabolic process
BSQ44_05860	COG3813	Protein conserved in bacteria
BSQ44_05870	COG0832	Belongs to the urease beta subunit family
BSQ44_05880	COG0804	urea catabolic process
BSQ44_05905	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BSQ44_05915	COG0830	nickel cation binding
BSQ44_05925	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BSQ44_05935	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BSQ44_05945	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ44_05960	COG2124	cytochrome p450
BSQ44_05975	COG0792	nuclease activity
BSQ44_05980	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BSQ44_05985	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
BSQ44_06020	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_06020	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_06030	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_06035	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_06040	COG0028	Belongs to the TPP enzyme family
BSQ44_06060	COG4589	Belongs to the CDS family
BSQ44_06075	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BSQ44_06085	COG3380	Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers
BSQ44_06090	COG1595	DNA-templated transcription, initiation
BSQ44_06110	COG0415	Belongs to the DNA photolyase family
BSQ44_06135	COG0544	peptidyl-prolyl cis-trans isomerase activity
BSQ44_06140	COG0316	Belongs to the HesB IscA family
BSQ44_06145	COG3791	Glutathione-dependent formaldehyde-activating
BSQ44_06150	COG0306	phosphate transporter
BSQ44_06160	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BSQ44_06170	COG0513	Belongs to the DEAD box helicase family
BSQ44_06175	COG2207	Transcriptional regulator
BSQ44_06180	COG3920	Histidine kinase
BSQ44_06185	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BSQ44_06190	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ44_06195	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BSQ44_06210	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BSQ44_06220	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_06225	COG1129	ABC transporter
BSQ44_06250	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_06270	COG3335	DDE superfamily endonuclease
BSQ44_06300	COG0745	RESPONSE REGULATOR receiver
BSQ44_06315	COG2801	Transposase and inactivated derivatives
BSQ44_06325	COG0582	viral genome integration into host DNA
BSQ44_06355	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
BSQ44_06375	COG2801	Transposase and inactivated derivatives
BSQ44_06390	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
BSQ44_06410	COG0475	glutathione-regulated potassium exporter activity
BSQ44_06410	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ44_06425	COG0840	transmembrane signaling receptor activity
BSQ44_06435	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BSQ44_06440	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BSQ44_06445	COG1797	cobyrinic acid a,c-diamide synthase activity
BSQ44_06530	COG1492	cobalamin metabolic process
BSQ44_06535	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BSQ44_06555	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BSQ44_06570	COG3384	dioxygenase
BSQ44_06575	COG1414	Transcriptional regulator
BSQ44_06585	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_06620	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_06625	COG1309	transcriptional regulator
BSQ44_06650	COG5507	3-demethylubiquinone-9 3-methyltransferase
BSQ44_06655	COG1597	lipid kinase activity
BSQ44_06660	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ44_06660	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BSQ44_06670	COG0735	belongs to the Fur family
BSQ44_06705	COG0156	8-amino-7-oxononanoate synthase activity
BSQ44_06720	COG1228	amidohydrolase
BSQ44_06725	COG2986	histidine ammonia-lyase
BSQ44_06735	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BSQ44_06745	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ44_06755	COG1393	Belongs to the ArsC family
BSQ44_06765	COG0640	Transcriptional regulator
BSQ44_06775	COG2085	NADP oxidoreductase coenzyme F420-dependent
BSQ44_06795	COG0582	viral genome integration into host DNA
BSQ44_06800	COG0784	Response regulator, receiver
BSQ44_06800	COG3437	response regulator, receiver
BSQ44_06820	COG2309	aminopeptidase activity
BSQ44_07010	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BSQ44_07015	COG0477	Major facilitator Superfamily
BSQ44_07020	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BSQ44_07040	COG1160	GTP binding
BSQ44_07055	COG0356	it plays a direct role in the translocation of protons across the membrane
BSQ44_07060	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BSQ44_07065	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BSQ44_07070	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BSQ44_07075	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BSQ44_07085	COG0009	L-threonylcarbamoyladenylate synthase
BSQ44_07095	COG0751	glycine-tRNA ligase activity
BSQ44_07105	COG0752	glycyl-tRNA synthetase alpha subunit
BSQ44_07125	COG0142	geranyltranstransferase activity
BSQ44_07150	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BSQ44_07155	COG0521	Mo-molybdopterin cofactor biosynthetic process
BSQ44_07180	COG0151	Belongs to the GarS family
BSQ44_07210	COG1960	acyl-CoA dehydrogenase activity
BSQ44_07230	COG0259	pyridoxamine-phosphate oxidase activity
BSQ44_07240	COG0484	heat shock protein binding
BSQ44_07245	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BSQ44_07260	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BSQ44_07280	COG0123	including yeast histone deacetylase and acetoin utilization protein
BSQ44_07285	COG1722	exodeoxyribonuclease VII activity
BSQ44_07300	COG1741	Belongs to the pirin family
BSQ44_07305	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BSQ44_07315	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BSQ44_07320	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BSQ44_07325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_07330	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BSQ44_07335	COG0312	modulator of DNA gyrase
BSQ44_07350	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_07355	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ44_07360	COG0109	protoheme IX farnesyltransferase activity
BSQ44_07365	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
BSQ44_07385	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BSQ44_07390	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BSQ44_07395	COG0328	RNA-DNA hybrid ribonuclease activity
BSQ44_07400	COG0678	peroxiredoxin activity
BSQ44_07410	COG1678	Uncharacterized ACR, COG1678
BSQ44_07420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_07425	COG0612	Peptidase, M16
BSQ44_07455	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_07460	COG2189	Belongs to the N(4) N(6)-methyltransferase family
BSQ44_07485	COG1196	nuclear chromosome segregation
BSQ44_07520	COG1174	glycine betaine transport
BSQ44_07525	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_07540	COG0628	permease
BSQ44_07550	COG0574	Belongs to the PEP-utilizing enzyme family
BSQ44_07550	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BSQ44_07565	COG2801	Transposase and inactivated derivatives
BSQ44_07585	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_07595	COG2080	2 iron, 2 sulfur cluster binding
BSQ44_07600	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BSQ44_07605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_07625	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_07625	COG2010	Cytochrome c
BSQ44_07630	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BSQ44_07655	COG3932	Exopolysaccharide synthesis, ExoD
BSQ44_07665	COG1268	BioY protein
BSQ44_07680	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_07715	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_07725	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_07755	COG0683	leucine binding
BSQ44_07765	COG5002	protein histidine kinase activity
BSQ44_07765	COG5001	Diguanylate cyclase
BSQ44_07765	COG3447	MASE1 domain protein
BSQ44_07810	COG5002	protein histidine kinase activity
BSQ44_07820	COG0784	Response regulator, receiver
BSQ44_07855	COG2186	Transcriptional regulator
BSQ44_07865	COG1129	ABC transporter
BSQ44_07870	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_07875	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_07880	COG3386	PFAM SMP-30 Gluconolaconase
BSQ44_07890	COG1129	ABC transporter
BSQ44_07895	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_07905	COG0667	Aldo Keto reductase
BSQ44_07910	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BSQ44_07930	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_07935	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_07940	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
BSQ44_07960	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_07975	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_07990	COG1960	acyl-CoA dehydrogenase activity
BSQ44_07995	COG1024	Enoyl-CoA hydratase
BSQ44_08005	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_08010	COG2072	flavoprotein involved in K transport
BSQ44_08040	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_08045	COG1802	Transcriptional regulator
BSQ44_08080	COG1137	ATPase activity
BSQ44_08085	COG1136	(ABC) transporter
BSQ44_08090	COG0673	inositol 2-dehydrogenase activity
BSQ44_08095	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_08145	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_08230	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ44_08235	COG0459	protein refolding
BSQ44_08255	COG0482	sulfurtransferase activity
BSQ44_08315	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_08325	COG0395	ABC-type sugar transport system, permease component
BSQ44_08340	COG3842	ATPase activity
BSQ44_08360	COG4118	positive regulation of growth
BSQ44_08390	COG1435	thymidine kinase activity
BSQ44_08410	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BSQ44_08420	COG0671	phosphoesterase, PA-phosphatase related
BSQ44_08435	COG0512	Glutamine amidotransferase of anthranilate synthase
BSQ44_08435	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BSQ44_08440	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BSQ44_08450	COG0788	formyltetrahydrofolate deformylase activity
BSQ44_08460	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_08470	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BSQ44_08490	COG0058	SHG alpha-glucan phosphorylase activity
BSQ44_08495	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BSQ44_08500	COG0297	glycogen (starch) synthase activity
BSQ44_08505	COG0033	Phosphoglucomutase
BSQ44_08525	COG2264	protein methyltransferase activity
BSQ44_08570	COG3750	Belongs to the UPF0335 family
BSQ44_08575	COG0629	single-stranded DNA binding
BSQ44_08800	COG3299	homolog of phage Mu protein gp47
BSQ44_08875	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ44_08875	COG2755	lipolytic protein G-D-S-L family
BSQ44_08880	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ44_08880	COG2755	lipolytic protein G-D-S-L family
BSQ44_08905	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_08910	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BSQ44_08925	COG3119	arylsulfatase activity
BSQ44_08930	COG1309	transcriptional regulator
BSQ44_08950	COG0183	Belongs to the thiolase family
BSQ44_08955	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_08980	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ44_08990	COG2755	lipolytic protein G-D-S-L family
BSQ44_08990	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BSQ44_09005	COG0433	COG0433 Predicted ATPase
BSQ44_09015	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_09015	COG1388	LysM domain
BSQ44_09025	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_09030	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BSQ44_09040	COG2010	Cytochrome c
BSQ44_09055	COG2111	Na H antiporter
BSQ44_09055	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BSQ44_09060	COG2111	Na H antiporter
BSQ44_09065	COG1006	Multisubunit Na H antiporter MnhC subunit
BSQ44_09070	COG0651	ATP synthesis coupled electron transport
BSQ44_09075	COG1863	multisubunit Na H antiporter MnhE subunit
BSQ44_09080	COG2212	antiporter activity
BSQ44_09085	COG1320	monovalent cation:proton antiporter activity
BSQ44_09090	COG4957	zinc ion binding
BSQ44_09100	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BSQ44_09110	COG2166	iron-sulfur cluster assembly
BSQ44_09120	COG2205	protein histidine kinase activity
BSQ44_09125	COG3409	Peptidoglycan-binding domain 1 protein
BSQ44_09125	COG3429	Glucose-6-phosphate dehydrogenase subunit
BSQ44_09160	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ44_09215	COG4235	cytochrome complex assembly
BSQ44_09220	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
BSQ44_09225	COG1138	Cytochrome C-type biogenesis protein
BSQ44_09230	COG3088	subunit of a heme lyase
BSQ44_09240	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ44_09245	COG0745	RESPONSE REGULATOR receiver
BSQ44_09255	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
BSQ44_09260	COG2202	Pas domain
BSQ44_09260	COG2205	protein histidine kinase activity
BSQ44_09265	COG0308	aminopeptidase N
BSQ44_09295	COG0625	glutathione transferase activity
BSQ44_09340	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BSQ44_09370	COG0596	Alpha beta hydrolase
BSQ44_09390	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BSQ44_09395	COG1960	acyl-CoA dehydrogenase activity
BSQ44_09400	COG1309	transcriptional regulator
BSQ44_09405	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BSQ44_09425	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_09450	COG2423	ornithine cyclodeaminase activity
BSQ44_09460	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_09485	COG2188	Transcriptional regulator
BSQ44_09515	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ44_09520	COG0066	3-isopropylmalate dehydratase activity
BSQ44_09525	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BSQ44_09560	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_09580	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_09605	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BSQ44_09625	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_09635	COG1960	acyl-CoA dehydrogenase activity
BSQ44_09640	COG1960	acyl-CoA dehydrogenase activity
BSQ44_09650	COG2267	carboxylic ester hydrolase activity
BSQ44_09655	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_09660	COG0625	glutathione transferase activity
BSQ44_09680	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_09695	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_09700	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_09705	COG2030	dehydratase
BSQ44_09720	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_09745	COG1136	(ABC) transporter
BSQ44_09750	COG0577	efflux transmembrane transporter activity
BSQ44_09775	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_09790	COG0765	amino acid transport
BSQ44_09795	COG0765	amino acid transport
BSQ44_09800	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_09805	COG0583	DNA-binding transcription factor activity
BSQ44_09825	COG2301	Belongs to the HpcH HpaI aldolase family
BSQ44_09835	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_09840	COG1131	(ABC) transporter
BSQ44_09860	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_09900	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_09960	COG1064	alcohol dehydrogenase
BSQ44_09965	COG0179	Fumarylacetoacetate (FAA) hydrolase
BSQ44_09990	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_10010	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_10035	COG0596	Alpha beta hydrolase
BSQ44_10045	COG0667	Aldo Keto reductase
BSQ44_10050	COG2188	Transcriptional regulator
BSQ44_10065	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_10075	COG0655	NAD(P)H dehydrogenase (quinone) activity
BSQ44_10080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_10090	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_10120	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_10165	COG0741	lytic transglycosylase activity
BSQ44_10170	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ44_10175	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BSQ44_10225	COG1573	uracil-dna glycosylase
BSQ44_10235	COG1758	RNA polymerase activity
BSQ44_10250	COG0736	holo-[acyl-carrier-protein] synthase activity
BSQ44_10255	COG0681	Belongs to the peptidase S26 family
BSQ44_10260	COG0571	ribonuclease III activity
BSQ44_10270	COG0456	acetyltransferase
BSQ44_10270	COG1846	Transcriptional regulator
BSQ44_10280	COG1381	Involved in DNA repair and RecF pathway recombination
BSQ44_10305	COG0668	transmembrane transport
BSQ44_10320	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BSQ44_10330	COG0850	regulation of cytokinetic process
BSQ44_10340	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BSQ44_10345	COG0354	folic acid binding
BSQ44_10370	COG2135	peptidase activity
BSQ44_10375	COG0215	cysteine-tRNA ligase activity
BSQ44_10380	COG2852	Protein conserved in bacteria
BSQ44_10395	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ44_10415	COG0583	DNA-binding transcription factor activity
BSQ44_10430	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_10435	COG3710	Transcriptional regulator
BSQ44_10460	COG5265	(ABC) transporter
BSQ44_10470	COG2202	Pas domain
BSQ44_10470	COG3920	Histidine kinase
BSQ44_10475	COG4251	negative regulation of phosphorylation
BSQ44_10480	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
BSQ44_10485	COG0688	phosphatidylethanolamine metabolic process
BSQ44_10490	COG1183	phosphatidylcholine synthase activity
BSQ44_10500	COG0251	oxidation-reduction process
BSQ44_10515	COG0640	Transcriptional regulator
BSQ44_10525	COG0785	Cytochrome C biogenesis protein
BSQ44_10560	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BSQ44_10570	COG2391	methyltransferase activity
BSQ44_10575	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_10585	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BSQ44_10600	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BSQ44_10605	COG0305	Participates in initiation and elongation during chromosome replication
BSQ44_10610	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BSQ44_10615	COG0359	binds to the 23S rRNA
BSQ44_10625	COG0360	Binds together with S18 to 16S ribosomal RNA
BSQ44_10635	COG1473	amidohydrolase
BSQ44_10640	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BSQ44_10650	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ44_10655	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ44_10660	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BSQ44_10665	COG1561	YicC-like family, N-terminal region
BSQ44_10670	COG0194	GDP metabolic process
BSQ44_10675	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BSQ44_10680	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BSQ44_10705	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BSQ44_10720	COG1024	Enoyl-CoA hydratase
BSQ44_10725	COG0488	(ABC) transporter
BSQ44_10750	COG0105	UTP biosynthetic process
BSQ44_10760	COG0314	molybdopterin synthase activity
BSQ44_10770	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BSQ44_10775	COG0322	excinuclease ABC activity
BSQ44_10780	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_10790	COG0625	glutathione transferase activity
BSQ44_10805	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BSQ44_10810	COG0243	molybdopterin cofactor binding
BSQ44_10815	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BSQ44_10820	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BSQ44_10830	COG0628	permease
BSQ44_10860	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BSQ44_10870	COG1088	dTDP-glucose 4,6-dehydratase activity
BSQ44_10875	COG1091	dTDP-4-dehydrorhamnose reductase activity
BSQ44_10890	COG2963	transposase activity
BSQ44_10925	COG0811	peptide transport
BSQ44_10945	COG3720	iron ion transport
BSQ44_10950	COG4558	Periplasmic binding protein
BSQ44_10955	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BSQ44_10960	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BSQ44_10975	COG0297	glycogen (starch) synthase activity
BSQ44_11005	COG1612	heme a metabolic process
BSQ44_11015	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BSQ44_11020	COG0010	Belongs to the arginase family
BSQ44_11030	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BSQ44_11035	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BSQ44_11050	COG1024	Enoyl-CoA hydratase
BSQ44_11070	COG1832	CoA-binding protein
BSQ44_11080	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_11100	COG0776	regulation of translation
BSQ44_11110	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BSQ44_11115	COG0740	serine-type endopeptidase activity
BSQ44_11125	COG2124	cytochrome p450
BSQ44_11145	COG3383	formate dehydrogenase (NAD+) activity
BSQ44_11150	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BSQ44_11180	COG4251	negative regulation of phosphorylation
BSQ44_11185	COG0784	Response regulator, receiver
BSQ44_11190	COG3920	Histidine kinase
BSQ44_11190	COG2202	Pas domain
BSQ44_11195	COG0745	RESPONSE REGULATOR receiver
BSQ44_11200	COG3025	triphosphatase activity
BSQ44_11210	COG1522	sequence-specific DNA binding
BSQ44_11225	COG2271	Major facilitator Superfamily
BSQ44_11240	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BSQ44_11260	COG0683	leucine binding
BSQ44_11275	COG1129	ABC transporter
BSQ44_11285	COG0657	acetylesterase activity
BSQ44_11295	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_11305	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_11320	COG0747	negative chemotaxis
BSQ44_11325	COG0601	transmembrane transport
BSQ44_11330	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_11335	COG0444	Belongs to the ABC transporter superfamily
BSQ44_11345	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_11350	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BSQ44_11370	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BSQ44_11410	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BSQ44_11425	COG0525	valine-tRNA ligase activity
BSQ44_11435	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BSQ44_11445	COG0708	Exodeoxyribonuclease III
BSQ44_11450	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ44_11455	COG3657	addiction module killer protein
BSQ44_11460	COG0174	glutamine synthetase
BSQ44_11465	COG0347	Belongs to the P(II) protein family
BSQ44_11470	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BSQ44_11470	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BSQ44_11480	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
BSQ44_11490	COG1671	Belongs to the UPF0178 family
BSQ44_11535	COG3618	amidohydrolase
BSQ44_11555	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_11575	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_11575	COG2169	Transcriptional regulator
BSQ44_11580	COG1609	Transcriptional regulator
BSQ44_11590	COG1175	transmembrane transport
BSQ44_11595	COG0395	ABC-type sugar transport system, permease component
BSQ44_11610	COG3842	ATPase activity
BSQ44_11630	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BSQ44_11635	COG1024	Enoyl-CoA hydratase
BSQ44_11685	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BSQ44_11690	COG0300	oxidoreductase activity
BSQ44_11695	COG2207	Transcriptional regulator
BSQ44_11705	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BSQ44_11745	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
BSQ44_11755	COG0511	ligase activity, forming carbon-carbon bonds
BSQ44_11770	COG0436	Aminotransferase
BSQ44_11775	COG2066	Belongs to the glutaminase family
BSQ44_11780	COG1530	ribonuclease E activity
BSQ44_11785	COG0860	N-Acetylmuramoyl-L-alanine amidase
BSQ44_11790	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BSQ44_11800	COG0739	heme binding
BSQ44_11805	COG2833	Protein of unknown function (DUF455)
BSQ44_11810	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BSQ44_11820	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BSQ44_11825	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BSQ44_11830	COG2808	Putative FMN-binding domain
BSQ44_11835	COG2945	thiolester hydrolase activity
BSQ44_11845	COG0719	Fe-S assembly protein
BSQ44_11855	COG0396	ATPase activity
BSQ44_11860	COG0719	Fe-S assembly protein
BSQ44_11865	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BSQ44_11870	COG2151	metal-sulfur cluster biosynthetic enzyme
BSQ44_11880	COG2003	Belongs to the UPF0758 family
BSQ44_11885	COG0024	Methionine aminopeptidase
BSQ44_11920	COG0601	transmembrane transport
BSQ44_11925	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_11955	COG2095	MarC family integral membrane protein
BSQ44_11960	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_12005	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_12015	COG3483	tryptophan 2,3-dioxygenase activity
BSQ44_12040	COG1024	Enoyl-CoA hydratase
BSQ44_12050	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_12060	COG0174	glutamine synthetase
BSQ44_12070	COG3384	dioxygenase
BSQ44_12080	COG0586	Pfam SNARE associated Golgi protein
BSQ44_12090	COG0210	DNA helicase
BSQ44_12100	COG3328	transposase activity
BSQ44_12115	COG3335	DDE superfamily endonuclease
BSQ44_12135	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BSQ44_12135	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BSQ44_12140	COG0509	glycine decarboxylation via glycine cleavage system
BSQ44_12145	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_12155	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BSQ44_12170	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BSQ44_12180	COG2321	neutral zinc metallopeptidase
BSQ44_12190	COG0505	Belongs to the CarA family
BSQ44_12200	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BSQ44_12205	COG0840	transmembrane signaling receptor activity
BSQ44_12210	COG0730	response to heat
BSQ44_12225	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BSQ44_12230	COG2205	protein histidine kinase activity
BSQ44_12230	COG2202	Pas domain
BSQ44_12240	COG1573	uracil-dna glycosylase
BSQ44_12245	COG1522	sequence-specific DNA binding
BSQ44_12265	COG2084	Dehydrogenase
BSQ44_12280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_12290	COG2814	Major facilitator Superfamily
BSQ44_12305	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BSQ44_12340	COG0785	Cytochrome C biogenesis protein
BSQ44_12345	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BSQ44_12350	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BSQ44_12370	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BSQ44_12380	COG0784	Response regulator, receiver
BSQ44_12390	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BSQ44_12410	COG0557	exoribonuclease II activity
BSQ44_12415	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BSQ44_12415	COG1754	DNA topoisomerase type I activity
BSQ44_12440	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_12445	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_12455	COG0649	NAD binding
BSQ44_12465	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
BSQ44_12470	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
BSQ44_12490	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
BSQ44_12500	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BSQ44_12510	COG0713	ATP synthesis coupled electron transport
BSQ44_12525	COG1007	ATP synthesis coupled electron transport
BSQ44_12540	COG0346	lactoylglutathione lyase activity
BSQ44_12550	COG0442	prolyl-tRNA aminoacylation
BSQ44_12555	COG4591	ABC-type transport system involved in lipoprotein release permease component
BSQ44_12565	COG0405	Gamma-glutamyltransferase
BSQ44_12570	COG0321	lipoyl(octanoyl) transferase activity
BSQ44_12595	COG2239	Acts as a magnesium transporter
BSQ44_12625	COG0656	L-ascorbic acid biosynthetic process
BSQ44_12670	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_12675	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BSQ44_12680	COG1127	ABC transporter
BSQ44_12710	COG0633	Ferredoxin
BSQ44_12715	COG0492	ferredoxin-NADP+ reductase activity
BSQ44_12725	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BSQ44_12730	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BSQ44_12735	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BSQ44_12745	COG3768	UPF0283 membrane protein
BSQ44_12750	COG3106	COG3106 Predicted ATPase
BSQ44_12815	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ44_12820	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BSQ44_12840	COG2885	chlorophyll binding
BSQ44_12855	COG4993	Dehydrogenase
BSQ44_12865	COG2188	Transcriptional regulator
BSQ44_12870	COG2721	sulfolactate sulfo-lyase activity
BSQ44_12890	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_12895	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_12910	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_12920	COG1858	cytochrome C peroxidase
BSQ44_12930	COG1522	sequence-specific DNA binding
BSQ44_12935	COG0506	proline dehydrogenase activity
BSQ44_12935	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BSQ44_12935	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BSQ44_12955	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_12975	COG1309	transcriptional regulator
BSQ44_13000	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BSQ44_13005	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ44_13025	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BSQ44_13030	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BSQ44_13050	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BSQ44_13055	COG3791	Glutathione-dependent formaldehyde-activating
BSQ44_13060	COG0343	queuine tRNA-ribosyltransferase activity
BSQ44_13070	COG2308	Evidence 4 Homologs of previously reported genes of
BSQ44_13095	COG1846	Transcriptional regulator
BSQ44_13120	COG3842	ATPase activity
BSQ44_13130	COG0395	ABC-type sugar transport system, permease component
BSQ44_13145	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BSQ44_13150	COG0540	Belongs to the ATCase OTCase family
BSQ44_13155	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BSQ44_13160	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BSQ44_13165	COG0758	DNA mediated transformation
BSQ44_13175	COG0174	glutamine synthetase
BSQ44_13185	COG3706	GGDEF domain
BSQ44_13200	COG2268	Band 7 protein
BSQ44_13235	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_13245	COG0384	phenazine biosynthesis protein PhzF
BSQ44_13255	COG0577	efflux transmembrane transporter activity
BSQ44_13255	COG1136	(ABC) transporter
BSQ44_13260	COG0577	efflux transmembrane transporter activity
BSQ44_13260	COG1136	(ABC) transporter
BSQ44_13270	COG1121	(ABC) transporter
BSQ44_13275	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BSQ44_13295	COG4166	transmembrane transport
BSQ44_13325	COG0316	Belongs to the HesB IscA family
BSQ44_13330	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BSQ44_13335	COG0018	arginyl-trna synthetase
BSQ44_13345	COG1472	Belongs to the glycosyl hydrolase 3 family
BSQ44_13350	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BSQ44_13355	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BSQ44_13360	COG3842	ATPase activity
BSQ44_13365	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BSQ44_13370	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BSQ44_13375	COG0805	protein transport
BSQ44_13380	COG2223	nitrite transmembrane transporter activity
BSQ44_13385	COG2207	Transcriptional regulator
BSQ44_13410	COG2301	Belongs to the HpcH HpaI aldolase family
BSQ44_13430	COG0412	Dienelactone hydrolase
BSQ44_13450	COG0277	FAD linked oxidase domain protein
BSQ44_13460	COG1271	oxidase subunit
BSQ44_13465	COG1294	oxidase, subunit
BSQ44_13495	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BSQ44_13515	COG0330	HflC and HflK could
BSQ44_13525	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ44_13535	COG3830	Belongs to the UPF0237 family
BSQ44_13535	COG0560	Phosphoserine phosphatase
BSQ44_13540	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BSQ44_13555	COG0028	Belongs to the TPP enzyme family
BSQ44_13565	COG0440	acetolactate synthase activity
BSQ44_13570	COG0187	DNA topoisomerase II activity
BSQ44_13580	COG4964	Belongs to the GSP D family
BSQ44_13620	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BSQ44_13630	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ44_13640	COG0281	malic enzyme
BSQ44_13640	COG0280	phosphate acetyltransferase
BSQ44_13660	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BSQ44_13685	COG1278	Cold shock
BSQ44_13745	COG1252	NADH dehydrogenase
BSQ44_13750	COG1218	3'(2'),5'-bisphosphate nucleotidase
BSQ44_13760	COG0175	sulfate reduction
BSQ44_13820	COG0024	Methionine aminopeptidase
BSQ44_13835	COG0303	'Molybdopterin
BSQ44_13840	COG0315	cyclic pyranopterin monophosphate synthase activity
BSQ44_13845	COG0134	indole-3-glycerol-phosphate synthase activity
BSQ44_13850	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BSQ44_13860	COG0149	triose-phosphate isomerase activity
BSQ44_13875	COG0504	CTP synthase activity
BSQ44_13895	COG1686	Belongs to the peptidase S11 family
BSQ44_13900	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BSQ44_13915	COG0084	hydrolase, TatD family'
BSQ44_13960	COG0432	Pfam Uncharacterised protein family UPF0047
BSQ44_13980	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BSQ44_13995	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_14005	COG3845	ABC transporter
BSQ44_14015	COG1183	phosphatidylcholine synthase activity
BSQ44_14020	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_14025	COG0679	Auxin Efflux Carrier
BSQ44_14045	COG4770	biotin carboxylase activity
BSQ44_14055	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BSQ44_14060	COG2989	Protein conserved in bacteria
BSQ44_14065	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BSQ44_14065	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BSQ44_14085	COG1846	Transcriptional regulator
BSQ44_14090	COG0589	response to stress
BSQ44_14095	COG0596	Alpha beta hydrolase
BSQ44_14105	COG1278	Cold shock
BSQ44_14115	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BSQ44_14130	COG0154	amidase activity
BSQ44_14135	COG0667	Aldo Keto reductase
BSQ44_14160	COG0746	molybdenum cofactor guanylyltransferase activity
BSQ44_14165	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BSQ44_14165	COG3608	succinylglutamate desuccinylase aspartoacylase
BSQ44_14185	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BSQ44_14190	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_14200	COG3191	aminopeptidase activity
BSQ44_14215	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BSQ44_14235	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BSQ44_14240	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BSQ44_14250	COG0047	phosphoribosylformylglycinamidine synthase activity
BSQ44_14280	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BSQ44_14295	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BSQ44_14310	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BSQ44_14315	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
BSQ44_14320	COG1024	Enoyl-CoA hydratase
BSQ44_14350	COG1862	Preprotein translocase
BSQ44_14365	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
BSQ44_14370	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
BSQ44_14375	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BSQ44_14390	COG0697	spore germination
BSQ44_14420	COG0803	Belongs to the bacterial solute-binding protein 9 family
BSQ44_14425	COG3200	phospho-2-dehydro-3-deoxyheptonate aldolase
BSQ44_14450	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BSQ44_14455	COG0546	phosphoglycolate phosphatase activity
BSQ44_14460	COG1278	Cold shock
BSQ44_14465	COG2084	Dehydrogenase
BSQ44_14470	COG5001	Diguanylate cyclase
BSQ44_14470	COG3300	MHYT domain
BSQ44_14480	COG0436	Aminotransferase
BSQ44_14505	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BSQ44_14515	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BSQ44_14535	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BSQ44_14540	COG3422	double-strand break repair
BSQ44_14545	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BSQ44_14555	COG0302	gtp cyclohydrolase
BSQ44_14560	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BSQ44_14565	COG1752	Esterase of the alpha-beta hydrolase superfamily
BSQ44_14575	COG1494	fructose-1,6-bisphosphatase
BSQ44_14595	COG0436	Aminotransferase
BSQ44_14605	COG3243	poly(R)-hydroxyalkanoic acid synthase
BSQ44_14620	COG1414	Transcriptional regulator
BSQ44_14625	COG0006	proline dipeptidase activity
BSQ44_14630	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_14635	COG1177	transmembrane transport
BSQ44_14645	COG3842	ATPase activity
BSQ44_14670	COG0629	single-stranded DNA binding
BSQ44_14690	COG1388	LysM domain
BSQ44_14690	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_14695	COG2885	chlorophyll binding
BSQ44_14700	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BSQ44_14715	COG0372	Belongs to the citrate synthase family
BSQ44_14720	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BSQ44_14725	COG3494	Protein of unknown function (DUF1009)
BSQ44_14730	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BSQ44_14735	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BSQ44_14745	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ44_14750	COG0750	zinc metalloprotease
BSQ44_14760	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BSQ44_14765	COG0233	cytoplasmic translational termination
BSQ44_14770	COG0528	UMP kinase activity
BSQ44_14775	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BSQ44_14780	COG0052	Belongs to the universal ribosomal protein uS2 family
BSQ44_14815	COG0537	adenosine 5'-monophosphoramidase activity
BSQ44_14835	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
BSQ44_14845	COG1686	Belongs to the peptidase S11 family
BSQ44_14850	COG0484	heat shock protein binding
BSQ44_14860	COG1192	Involved in chromosome partitioning
BSQ44_14870	COG1760	l-serine dehydratase
BSQ44_14890	COG2226	methyltransferase
BSQ44_14895	COG0154	amidase activity
BSQ44_14905	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BSQ44_14910	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BSQ44_14915	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BSQ44_14930	COG1960	acyl-CoA dehydrogenase activity
BSQ44_14940	COG0737	Belongs to the 5'-nucleotidase family
BSQ44_14945	COG1196	nuclear chromosome segregation
BSQ44_14945	COG3264	Mechanosensitive ion channel
BSQ44_14950	COG3300	MHYT domain
BSQ44_14950	COG5001	Diguanylate cyclase
BSQ44_14960	COG0686	Belongs to the AlaDH PNT family
BSQ44_14975	COG2897	thiosulfate sulfurtransferase activity
BSQ44_15000	COG1546	Belongs to the CinA family
BSQ44_15000	COG1058	Belongs to the CinA family
BSQ44_15005	COG0655	NAD(P)H dehydrogenase (quinone) activity
BSQ44_15015	COG0596	Alpha beta hydrolase
BSQ44_15015	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_15030	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_15045	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_15050	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_15090	COG1846	Transcriptional regulator
BSQ44_15120	COG1335	isochorismatase
BSQ44_15180	COG3956	TIGRFAM MazG family protein
BSQ44_15185	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BSQ44_15190	COG1923	regulation of RNA biosynthetic process
BSQ44_15195	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_15200	COG0569	domain protein
BSQ44_15205	COG2204	response regulator
BSQ44_15210	COG5000	phosphorelay sensor kinase activity
BSQ44_15215	COG2204	response regulator
BSQ44_15220	COG3852	Histidine kinase
BSQ44_15230	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BSQ44_15230	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BSQ44_15245	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
BSQ44_15260	COG3300	MHYT domain
BSQ44_15260	COG5001	Diguanylate cyclase
BSQ44_15265	COG2200	EAL domain
BSQ44_15265	COG2199	diguanylate cyclase activity
BSQ44_15265	COG2203	Gaf domain
BSQ44_15270	COG2801	Transposase and inactivated derivatives
BSQ44_15285	COG0784	Response regulator, receiver
BSQ44_15285	COG4191	Histidine kinase
BSQ44_15295	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BSQ44_15310	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_15320	COG0022	dehydrogenase e1 component
BSQ44_15320	COG0508	dehydrogenase complex catalyzes the overall conversion of
BSQ44_15325	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BSQ44_15335	COG0148	phosphopyruvate hydratase activity
BSQ44_15350	COG2877	3-deoxy-8-phosphooctulonate synthase activity
BSQ44_15360	COG1686	Belongs to the peptidase S11 family
BSQ44_15370	COG1215	transferase activity, transferring glycosyl groups
BSQ44_15375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_15380	COG0625	glutathione transferase activity
BSQ44_15385	COG0747	negative chemotaxis
BSQ44_15395	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_15485	COG0778	Nitroreductase
BSQ44_15495	COG0006	proline dipeptidase activity
BSQ44_15515	COG1410	methionine synthase
BSQ44_15515	COG0646	methionine synthase
BSQ44_15530	COG2304	oxidoreductase activity
BSQ44_15565	COG5598	trimethylamine methyltransferase
BSQ44_15570	COG5012	cobalamin binding
BSQ44_15605	COG1410	methionine synthase
BSQ44_15605	COG0646	methionine synthase
BSQ44_15620	COG0583	DNA-binding transcription factor activity
BSQ44_15650	COG1280	lysine exporter protein (LysE YggA)
BSQ44_15695	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_15710	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
BSQ44_15715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_15725	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_15725	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_15740	COG0583	DNA-binding transcription factor activity
BSQ44_15800	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_15805	COG2040	homocysteine
BSQ44_15830	COG2801	Transposase and inactivated derivatives
BSQ44_15865	COG2226	methyltransferase
BSQ44_15880	COG4176	ABC-type proline glycine betaine transport system permease component
BSQ44_15885	COG4175	Glycine betaine
BSQ44_15885	COG0517	IMP dehydrogenase activity
BSQ44_15925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_15940	COG0402	S-adenosylhomocysteine deaminase activity
BSQ44_15975	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BSQ44_15980	COG1309	transcriptional regulator
BSQ44_15995	COG1733	regulation of RNA biosynthetic process
BSQ44_16005	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BSQ44_16020	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BSQ44_16045	COG0702	epimerase
BSQ44_16085	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BSQ44_16100	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BSQ44_16105	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BSQ44_16110	COG0203	ribosomal protein L17
BSQ44_16115	COG0202	RNA polymerase activity
BSQ44_16120	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BSQ44_16125	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BSQ44_16130	COG0563	adenylate kinase activity
BSQ44_16140	COG0200	Binds to the 23S rRNA
BSQ44_16145	COG1841	ribosomal large subunit assembly
BSQ44_16150	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BSQ44_16155	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BSQ44_16160	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BSQ44_16170	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BSQ44_16175	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BSQ44_16180	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BSQ44_16185	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BSQ44_16190	COG0255	Belongs to the universal ribosomal protein uL29 family
BSQ44_16195	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BSQ44_16200	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BSQ44_16205	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BSQ44_16210	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BSQ44_16215	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BSQ44_16220	COG0089	rRNA binding
BSQ44_16225	COG0088	Forms part of the polypeptide exit tunnel
BSQ44_16230	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BSQ44_16235	COG0051	transcription antitermination factor activity, RNA binding
BSQ44_16240	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BSQ44_16245	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BSQ44_16250	COG0049	tRNA binding
BSQ44_16255	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BSQ44_16265	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BSQ44_16270	COG0085	RNA polymerase activity
BSQ44_16275	COG0222	ribosome binding
BSQ44_16280	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BSQ44_16285	COG0081	regulation of translation
BSQ44_16290	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BSQ44_16300	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BSQ44_16330	COG1999	signal sequence binding
BSQ44_16340	COG2264	protein methyltransferase activity
BSQ44_16350	COG0006	proline dipeptidase activity
BSQ44_16350	COG0006	proline dipeptidase activity
BSQ44_16365	COG0497	DNA recombination
BSQ44_16370	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ44_16380	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BSQ44_16385	COG0849	cell division
BSQ44_16390	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BSQ44_16395	COG1181	Belongs to the D-alanine--D-alanine ligase family
BSQ44_16400	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BSQ44_16405	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BSQ44_16410	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BSQ44_16420	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BSQ44_16425	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BSQ44_16435	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BSQ44_16450	COG0275	rRNA processing
BSQ44_16455	COG2001	Belongs to the MraZ family
BSQ44_16460	COG0626	cystathionine gamma-synthase activity
BSQ44_16485	COG3023	N-Acetylmuramoyl-L-alanine amidase
BSQ44_16490	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
BSQ44_16515	COG3769	mannosylglycerate metabolic process
BSQ44_16520	COG1215	transferase activity, transferring glycosyl groups
BSQ44_16530	COG0366	Alpha amylase catalytic
BSQ44_16570	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BSQ44_16575	COG2226	methyltransferase
BSQ44_16580	COG1720	tRNA m6t6A37 methyltransferase activity
BSQ44_16605	COG4106	trans-aconitate 2-methyltransferase activity
BSQ44_16630	COG0513	Belongs to the DEAD box helicase family
BSQ44_16635	COG4221	oxidoreductase activity
BSQ44_16645	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_16675	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_16680	COG0028	Belongs to the TPP enzyme family
BSQ44_16705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BSQ44_16710	COG2151	metal-sulfur cluster biosynthetic enzyme
BSQ44_16715	COG3396	Phenylacetate-CoA oxygenase
BSQ44_16720	COG3460	Phenylacetate-CoA oxygenase
BSQ44_16740	COG3396	Phenylacetate-CoA oxygenase
BSQ44_16760	COG1309	transcriptional regulator
BSQ44_16765	COG3046	protein related to deoxyribodipyrimidine photolyase
BSQ44_16785	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BSQ44_16795	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BSQ44_16800	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BSQ44_16825	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
BSQ44_16830	COG0248	Ppx GppA phosphatase
BSQ44_16835	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BSQ44_16845	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BSQ44_16855	COG1126	abc transporter atp-binding protein
BSQ44_16860	COG0765	amino acid transport
BSQ44_16865	COG4597	amino acid ABC transporter
BSQ44_16870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_16875	COG0626	cystathionine gamma-synthase activity
BSQ44_16890	COG0395	ABC-type sugar transport system, permease component
BSQ44_16895	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_16905	COG3842	ATPase activity
BSQ44_16915	COG0514	ATP-dependent DNA helicase (RecQ)
BSQ44_16920	COG1802	Transcriptional regulator
BSQ44_16985	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BSQ44_17000	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ44_17030	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BSQ44_17085	COG2968	Membrane
BSQ44_17095	COG2983	Belongs to the UPF0260 family
BSQ44_17115	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BSQ44_17195	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_17195	COG3347	Dehydrogenase
BSQ44_17200	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
BSQ44_17205	COG4423	Transcription factor
BSQ44_17215	COG1172	Belongs to the binding-protein-dependent transport system permease family
BSQ44_17220	COG1129	ABC transporter
BSQ44_17230	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BSQ44_17250	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ44_17255	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BSQ44_17260	COG0271	Belongs to the BolA IbaG family
BSQ44_17270	COG2814	Major facilitator Superfamily
BSQ44_17275	COG0037	tRNA processing
BSQ44_17280	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BSQ44_17295	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BSQ44_17300	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BSQ44_17310	COG0596	Alpha beta hydrolase
BSQ44_17320	COG0538	isocitrate dehydrogenase activity
BSQ44_17335	COG0671	phosphoesterase, PA-phosphatase related
BSQ44_17335	COG2453	phosphatase
BSQ44_17340	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BSQ44_17345	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BSQ44_17355	COG2313	pseudouridylate synthase activity
BSQ44_17360	COG0673	inositol 2-dehydrogenase activity
BSQ44_17380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BSQ44_17385	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BSQ44_17395	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BSQ44_17405	COG1560	Kdo2-lipid A biosynthetic process
BSQ44_17415	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BSQ44_17450	COG3302	dmso reductase anchor subunit
BSQ44_17455	COG0437	4 iron, 4 sulfur cluster binding
BSQ44_17460	COG0243	molybdopterin cofactor binding
BSQ44_17465	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BSQ44_17490	COG0776	regulation of translation
BSQ44_17495	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BSQ44_17500	COG0416	fatty acid biosynthetic process
BSQ44_17515	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BSQ44_17530	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BSQ44_17555	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
BSQ44_17560	COG2814	Major facilitator Superfamily
BSQ44_17565	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BSQ44_17570	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BSQ44_17580	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BSQ44_17580	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BSQ44_17585	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BSQ44_17610	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BSQ44_17615	COG2989	Protein conserved in bacteria
BSQ44_17630	COG1024	Enoyl-CoA hydratase
BSQ44_17635	COG0113	porphobilinogen synthase activity
BSQ44_17670	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
BSQ44_17680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_17690	COG3327	negative regulation of DNA-templated transcription, initiation
BSQ44_17705	COG2050	protein possibly involved in aromatic compounds catabolism
BSQ44_17710	COG2124	cytochrome p450
BSQ44_17715	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_17715	COG2030	dehydratase
BSQ44_17725	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BSQ44_17730	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_17745	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_17750	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ44_17765	COG3239	Fatty acid desaturase
BSQ44_17770	COG1278	Cold shock
BSQ44_17790	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_17795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_17815	COG1280	lysine exporter protein (LysE YggA)
BSQ44_17830	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_17835	COG1309	transcriptional regulator
BSQ44_17840	COG2199	diguanylate cyclase activity
BSQ44_17840	COG2200	EAL domain
BSQ44_17865	COG0493	'glutamate synthase
BSQ44_17885	COG5598	trimethylamine methyltransferase
BSQ44_17900	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_17915	COG1960	acyl-CoA dehydrogenase activity
BSQ44_17925	COG4172	Belongs to the ABC transporter superfamily
BSQ44_17930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_17940	COG0747	negative chemotaxis
BSQ44_17975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BSQ44_17980	COG0402	S-adenosylhomocysteine deaminase activity
BSQ44_17990	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ44_17995	COG2249	NAD(P)H dehydrogenase (quinone) activity
BSQ44_18000	COG2373	Large extracellular alpha-helical protein
BSQ44_18005	COG4953	penicillin-binding protein 1C
BSQ44_18015	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BSQ44_18045	COG2267	carboxylic ester hydrolase activity
BSQ44_18050	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_18060	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_18065	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_18070	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_18080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BSQ44_18085	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BSQ44_18090	COG0583	DNA-binding transcription factor activity
BSQ44_18095	COG0492	ferredoxin-NADP+ reductase activity
BSQ44_18100	COG1522	sequence-specific DNA binding
BSQ44_18105	COG2264	protein methyltransferase activity
BSQ44_18110	COG0463	Glycosyl transferase, family 2
BSQ44_18115	COG0438	transferase activity, transferring glycosyl groups
BSQ44_18120	COG0438	transferase activity, transferring glycosyl groups
BSQ44_18125	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BSQ44_18180	COG1607	acyl-coa hydrolase
BSQ44_18185	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BSQ44_18190	COG4948	Mandelate Racemase Muconate Lactonizing
BSQ44_18205	COG0596	Alpha beta hydrolase
BSQ44_18220	COG3920	Histidine kinase
BSQ44_18220	COG2202	Pas domain
BSQ44_18225	COG0277	FAD linked oxidase domain protein
BSQ44_18235	COG0556	nucleotide-excision repair
BSQ44_18240	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BSQ44_18265	COG1278	Cold shock
BSQ44_18270	COG1278	Cold shock
BSQ44_18280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ44_18285	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_18290	COG1846	Transcriptional regulator
BSQ44_18295	COG0745	RESPONSE REGULATOR receiver
BSQ44_18315	COG0367	asparagine synthase
BSQ44_18325	COG0589	response to stress
BSQ44_18330	COG0659	secondary active sulfate transmembrane transporter activity
BSQ44_18335	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BSQ44_18350	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BSQ44_18360	COG1496	oxidoreductase activity
BSQ44_18375	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BSQ44_18400	COG0583	DNA-binding transcription factor activity
BSQ44_18415	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BSQ44_18420	COG0193	aminoacyl-tRNA hydrolase activity
BSQ44_18445	COG0012	GTP binding
BSQ44_18535	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BSQ44_18540	COG3608	succinylglutamate desuccinylase aspartoacylase
BSQ44_18545	COG2207	Transcriptional regulator
BSQ44_18545	COG1917	Cupin 2, conserved barrel domain protein
BSQ44_18550	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ44_18590	COG4209	transmembrane transport
BSQ44_18600	COG2390	Transcriptional regulator
BSQ44_18605	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BSQ44_18610	COG0596	Alpha beta hydrolase
BSQ44_18645	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
BSQ44_18650	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BSQ44_18655	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BSQ44_18655	COG2857	Cytochrome c1
BSQ44_18690	COG1132	(ABC) transporter
BSQ44_18695	COG1132	(ABC) transporter
BSQ44_18700	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BSQ44_18710	COG0408	coproporphyrinogen oxidase activity
BSQ44_18720	COG0617	tRNA 3'-terminal CCA addition
BSQ44_18735	COG0714	Associated with various cellular activities
BSQ44_18760	COG0435	Glutathione S-transferase
BSQ44_18785	COG2267	carboxylic ester hydrolase activity
BSQ44_18790	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ44_18800	COG0596	Alpha beta hydrolase
BSQ44_18805	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_18805	COG1024	Enoyl-CoA hydratase
BSQ44_18810	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_18815	COG0183	Belongs to the thiolase family
BSQ44_18820	COG1960	acyl-CoA dehydrogenase activity
BSQ44_18825	COG1960	acyl-CoA dehydrogenase activity
BSQ44_18830	COG2116	formate transmembrane transporter activity
BSQ44_18880	COG1522	sequence-specific DNA binding
BSQ44_18920	COG1063	alcohol dehydrogenase
BSQ44_18935	COG3706	GGDEF domain
BSQ44_18945	COG1960	acyl-CoA dehydrogenase activity
BSQ44_18950	COG5001	Diguanylate cyclase
BSQ44_18950	COG3300	MHYT domain
BSQ44_18955	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BSQ44_18970	COG1663	tetraacyldisaccharide 4'-kinase activity
BSQ44_18975	COG1519	Transferase
BSQ44_18995	COG0312	modulator of DNA gyrase
BSQ44_19000	COG0475	glutathione-regulated potassium exporter activity
BSQ44_19000	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BSQ44_19015	COG0612	Peptidase, M16
BSQ44_19020	COG0612	Peptidase, M16
BSQ44_19025	COG0742	ribosomal rna small subunit methyltransferase
BSQ44_19030	COG1187	pseudouridine synthase activity
BSQ44_19035	COG0590	tRNA wobble adenosine to inosine editing
BSQ44_19045	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BSQ44_19055	COG0196	riboflavin kinase activity
BSQ44_19080	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ44_19085	COG0459	protein refolding
BSQ44_19095	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_19100	COG0730	response to heat
BSQ44_19105	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_19110	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_19110	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_19115	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_19120	COG1253	flavin adenine dinucleotide binding
BSQ44_19125	COG0114	fumarate hydratase activity
BSQ44_19135	COG2259	Doxx family
BSQ44_19140	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BSQ44_19145	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BSQ44_19150	COG0124	histidyl-tRNA synthetase
BSQ44_19165	COG2818	Glycosylase
BSQ44_19170	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_19205	COG0277	FAD linked oxidase domain protein
BSQ44_19220	COG0277	FAD linked oxidase domain protein
BSQ44_19225	COG2186	Transcriptional regulator
BSQ44_19230	COG0247	lactate metabolic process
BSQ44_19265	COG3706	GGDEF domain
BSQ44_19275	COG0443	Heat shock 70 kDa protein
BSQ44_19305	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_19355	COG3485	protocatechuate 3,4-dioxygenase
BSQ44_19360	COG0583	DNA-binding transcription factor activity
BSQ44_19375	COG5490	Phasin protein
BSQ44_19380	COG2205	protein histidine kinase activity
BSQ44_19385	COG1840	ABC-type Fe3 transport system, periplasmic component
BSQ44_19390	COG1178	ABC-type Fe3 transport system permease component
BSQ44_19395	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_19410	COG1177	transmembrane transport
BSQ44_19415	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_19420	COG3842	ATPase activity
BSQ44_19430	COG0174	glutamine synthetase
BSQ44_19440	COG1254	Belongs to the acylphosphatase family
BSQ44_19445	COG0604	alcohol dehydrogenase
BSQ44_19455	COG1396	sequence-specific DNA binding
BSQ44_19455	COG3800	Transcriptional regulator
BSQ44_19460	COG2224	Isocitrate lyase
BSQ44_19475	COG0174	glutamine synthetase
BSQ44_19480	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BSQ44_19490	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_19505	COG3273	potassium ion transport
BSQ44_19505	COG0471	metal ion transport
BSQ44_19525	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_19530	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BSQ44_19535	COG0363	glucosamine-6-phosphate deaminase activity
BSQ44_19540	COG0129	dihydroxy-acid dehydratase activity
BSQ44_19595	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BSQ44_19610	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_19615	COG3180	Ammonia monooxygenase
BSQ44_19625	COG0123	including yeast histone deacetylase and acetoin utilization protein
BSQ44_19630	COG0534	Mate efflux family protein
BSQ44_19635	COG0167	dihydroorotate dehydrogenase activity
BSQ44_19660	COG0784	Response regulator, receiver
BSQ44_19660	COG2198	Histidine kinase
BSQ44_19660	COG2205	protein histidine kinase activity
BSQ44_19665	COG1970	mechanosensitive ion channel activity
BSQ44_19670	COG0519	Catalyzes the synthesis of GMP from XMP
BSQ44_19670	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BSQ44_19680	COG2133	pyrroloquinoline quinone binding
BSQ44_19685	COG0583	DNA-binding transcription factor activity
BSQ44_19690	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BSQ44_19695	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BSQ44_19705	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BSQ44_19720	COG0424	maF-like protein
BSQ44_19725	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BSQ44_19735	COG5328	Belongs to the UPF0262 family
BSQ44_19740	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BSQ44_19750	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BSQ44_19775	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BSQ44_19780	COG2943	transferase activity, transferring hexosyl groups
BSQ44_19810	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BSQ44_19820	COG0436	Aminotransferase
BSQ44_19830	COG0477	Major facilitator Superfamily
BSQ44_19835	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
BSQ44_19865	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BSQ44_19870	COG3246	L-lysine catabolic process to acetate
BSQ44_19910	COG2188	Transcriptional regulator
BSQ44_19915	COG1744	ABC transporter substrate-binding protein PnrA-like
BSQ44_19920	COG3845	ABC transporter
BSQ44_19925	COG4603	Belongs to the binding-protein-dependent transport system permease family
BSQ44_19930	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_19950	COG4821	SIS domain
BSQ44_19975	COG2801	Transposase and inactivated derivatives
BSQ44_20000	COG2801	Transposase and inactivated derivatives
BSQ44_20020	COG5001	Diguanylate cyclase
BSQ44_20025	COG5001	Diguanylate cyclase
BSQ44_20025	COG5002	protein histidine kinase activity
BSQ44_20075	COG4608	Belongs to the ABC transporter superfamily
BSQ44_20090	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_20105	COG2515	1-aminocyclopropane-1-carboxylate deaminase
BSQ44_20115	COG0277	FAD linked oxidase domain protein
BSQ44_20145	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
BSQ44_20190	COG0717	Belongs to the dCTP deaminase family
BSQ44_20205	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BSQ44_20210	COG2967	ApaG domain
BSQ44_20220	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BSQ44_20225	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BSQ44_20235	COG0704	Plays a role in the regulation of phosphate uptake
BSQ44_20240	COG5002	protein histidine kinase activity
BSQ44_20245	COG2326	polyphosphate kinase activity
BSQ44_20290	COG1024	Enoyl-CoA hydratase
BSQ44_20300	COG2197	response regulator
BSQ44_20305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BSQ44_20315	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
BSQ44_20340	COG1024	Enoyl-CoA hydratase
BSQ44_20340	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_20345	COG2200	EAL domain
BSQ44_20345	COG2199	diguanylate cyclase activity
BSQ44_20350	COG0183	Belongs to the thiolase family
BSQ44_20365	COG1960	acyl-CoA dehydrogenase activity
BSQ44_20380	COG0730	response to heat
BSQ44_20400	COG1201	RNA secondary structure unwinding
BSQ44_20475	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BSQ44_20530	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_20535	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BSQ44_20535	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_20545	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BSQ44_20555	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BSQ44_20560	COG0583	DNA-binding transcription factor activity
BSQ44_20565	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_20580	COG3246	L-lysine catabolic process to acetate
BSQ44_20620	COG0145	ligase activity
BSQ44_20630	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_20695	COG1793	dna ligase
BSQ44_20710	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BSQ44_20715	COG4608	Belongs to the ABC transporter superfamily
BSQ44_20730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_20735	COG0601	transmembrane transport
BSQ44_20740	COG0747	negative chemotaxis
BSQ44_20750	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_20760	COG0546	phosphoglycolate phosphatase activity
BSQ44_20770	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BSQ44_20780	COG0840	transmembrane signaling receptor activity
BSQ44_20795	COG0129	dihydroxy-acid dehydratase activity
BSQ44_20805	COG1024	Enoyl-CoA hydratase
BSQ44_20825	COG0489	protein tyrosine kinase activity
BSQ44_20845	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_20850	COG1177	transmembrane transport
BSQ44_20855	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_20860	COG3842	ATPase activity
BSQ44_20865	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BSQ44_20875	COG0583	DNA-binding transcription factor activity
BSQ44_20890	COG2358	TRAP transporter, solute receptor (TAXI family
BSQ44_20905	COG0745	RESPONSE REGULATOR receiver
BSQ44_20910	COG2201	protein-glutamate methylesterase activity
BSQ44_20915	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BSQ44_20920	COG0835	chemotaxis
BSQ44_20925	COG0643	Histidine kinase
BSQ44_20925	COG2198	Histidine kinase
BSQ44_20930	COG0643	Histidine kinase
BSQ44_20930	COG2198	Histidine kinase
BSQ44_20930	COG0784	Response regulator, receiver
BSQ44_20940	COG0840	transmembrane signaling receptor activity
BSQ44_20945	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ44_20955	COG0842	Transport permease protein
BSQ44_20960	COG1131	(ABC) transporter
BSQ44_20965	COG2226	methyltransferase
BSQ44_20995	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BSQ44_21020	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BSQ44_21050	COG0601	transmembrane transport
BSQ44_21055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_21060	COG0444	Belongs to the ABC transporter superfamily
BSQ44_21095	COG0438	transferase activity, transferring glycosyl groups
BSQ44_21105	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_21120	COG4172	Belongs to the ABC transporter superfamily
BSQ44_21130	COG0668	transmembrane transport
BSQ44_21140	COG2192	nodulation
BSQ44_21165	COG0673	inositol 2-dehydrogenase activity
BSQ44_21175	COG3842	ATPase activity
BSQ44_21180	COG0395	ABC-type sugar transport system, permease component
BSQ44_21185	COG1175	transmembrane transport
BSQ44_21190	COG1653	transport
BSQ44_21200	COG2771	luxR family
BSQ44_21215	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BSQ44_21220	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BSQ44_21225	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BSQ44_21235	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BSQ44_21245	COG4786	Flagellar basal body rod
BSQ44_21250	COG1157	protein secretion by the type III secretion system
BSQ44_21260	COG1815	bacterial-type flagellum-dependent cell motility
BSQ44_21265	COG1558	bacterial-type flagellum-dependent cell motility
BSQ44_21270	COG1677	Flagellar hook-basal body complex protein FliE
BSQ44_21275	COG4786	Flagellar basal body rod
BSQ44_21280	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
BSQ44_21285	COG1706	bacterial-type flagellum-dependent cell motility
BSQ44_21295	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
BSQ44_21305	COG1338	Plays a role in the flagellum-specific transport system
BSQ44_21310	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ44_21315	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BSQ44_21320	COG1766	The M ring may be actively involved in energy transduction
BSQ44_21330	COG1360	Flagellar Motor Protein
BSQ44_21370	COG5442	Flagellar protein FlaF
BSQ44_21375	COG5443	negative regulation of bacterial-type flagellum assembly
BSQ44_21380	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BSQ44_21385	COG1987	bacterial-type flagellum assembly
BSQ44_21390	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BSQ44_21420	COG1024	Enoyl-CoA hydratase
BSQ44_21455	COG1022	Amp-dependent synthetase and ligase
BSQ44_21455	COG3320	Male sterility
BSQ44_21465	COG2801	Transposase and inactivated derivatives
BSQ44_21485	COG0753	catalase activity
BSQ44_21490	COG1960	acyl-CoA dehydrogenase activity
BSQ44_21525	COG4453	Protein conserved in bacteria
BSQ44_21530	COG3153	acetyltransferase
BSQ44_21535	COG0154	amidase activity
BSQ44_21550	COG0583	DNA-binding transcription factor activity
BSQ44_21575	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BSQ44_21585	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_21590	COG1230	cation diffusion facilitator family transporter
BSQ44_21615	COG3273	potassium ion transport
BSQ44_21615	COG0471	metal ion transport
BSQ44_21620	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_21650	COG1054	Belongs to the UPF0176 family
BSQ44_21660	COG0800	Aldolase
BSQ44_21670	COG2204	response regulator
BSQ44_21700	COG0129	dihydroxy-acid dehydratase activity
BSQ44_21705	COG5310	Homospermidine synthase
BSQ44_21715	COG2738	Putative neutral zinc metallopeptidase
BSQ44_21735	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BSQ44_21755	COG0330	HflC and HflK could
BSQ44_21775	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BSQ44_21780	COG2951	lytic endotransglycosylase activity
BSQ44_21810	COG0070	glutamate synthase
BSQ44_21810	COG0069	glutamate synthase activity
BSQ44_21810	COG0067	glutamate synthase
BSQ44_21825	COG3220	belongs to the UPF0276 family
BSQ44_21840	COG0071	Belongs to the small heat shock protein (HSP20) family
BSQ44_21895	COG4608	Belongs to the ABC transporter superfamily
BSQ44_21900	COG0444	Belongs to the ABC transporter superfamily
BSQ44_21910	COG1609	Transcriptional regulator
BSQ44_21920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BSQ44_21935	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BSQ44_21940	COG1024	Enoyl-CoA hydratase
BSQ44_21945	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BSQ44_21955	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_21985	COG1024	Enoyl-CoA hydratase
BSQ44_21990	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_21995	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_22020	COG2358	TRAP transporter, solute receptor (TAXI family
BSQ44_22035	COG0747	negative chemotaxis
BSQ44_22040	COG0601	transmembrane transport
BSQ44_22045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_22050	COG0444	Belongs to the ABC transporter superfamily
BSQ44_22055	COG4608	Belongs to the ABC transporter superfamily
BSQ44_22075	COG1804	L-carnitine dehydratase bile acid-inducible protein F
BSQ44_22080	COG1473	amidohydrolase
BSQ44_22090	COG0154	amidase activity
BSQ44_22095	COG0583	DNA-binding transcription factor activity
BSQ44_22100	COG0546	phosphoglycolate phosphatase activity
BSQ44_22110	COG3842	ATPase activity
BSQ44_22120	COG4208	sulfate ABC transporter
BSQ44_22160	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_22175	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BSQ44_22180	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ44_22185	COG0488	(ABC) transporter
BSQ44_22195	COG1022	Amp-dependent synthetase and ligase
BSQ44_22215	COG0559	Belongs to the binding-protein-dependent transport system permease family
BSQ44_22225	COG3321	synthase
BSQ44_22225	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_22225	COG0604	alcohol dehydrogenase
BSQ44_22230	COG1960	acyl-CoA dehydrogenase activity
BSQ44_22255	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_22265	COG0446	pyridine nucleotide-disulphide oxidoreductase
BSQ44_22265	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_22280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BSQ44_22295	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BSQ44_22365	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_22380	COG5001	Diguanylate cyclase
BSQ44_22405	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_22410	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_22415	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
BSQ44_22425	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BSQ44_22450	COG0523	cobalamin synthesis protein
BSQ44_22470	COG1573	uracil-dna glycosylase
BSQ44_22480	COG3622	Belongs to the hyi family
BSQ44_22485	COG4702	Belongs to the UPF0303 family
BSQ44_22490	COG2258	MOSC domain
BSQ44_22495	COG0402	S-adenosylhomocysteine deaminase activity
BSQ44_22505	COG0583	DNA-binding transcription factor activity
BSQ44_22525	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BSQ44_22535	COG2351	hydroxyisourate hydrolase activity
BSQ44_22540	COG3648	Uricase
BSQ44_22540	COG3195	allantoin biosynthetic process
BSQ44_22545	COG3257	ureidoglycine aminohydrolase activity
BSQ44_22550	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
BSQ44_22565	COG2944	sequence-specific DNA binding
BSQ44_22585	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_22595	COG3609	addiction module antidote protein, CC2985 family
BSQ44_22605	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BSQ44_22650	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_22660	COG3246	L-lysine catabolic process to acetate
BSQ44_22665	COG4977	sequence-specific DNA binding
BSQ44_22670	COG4456	Virulence-associated protein
BSQ44_22680	COG0456	acetyltransferase
BSQ44_22685	COG1902	pentaerythritol trinitrate reductase activity
BSQ44_22695	COG0183	Belongs to the thiolase family
BSQ44_22700	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BSQ44_22710	COG1414	Transcriptional regulator
BSQ44_22720	COG3842	ATPase activity
BSQ44_22725	COG0395	ABC-type sugar transport system, permease component
BSQ44_22730	COG1175	transmembrane transport
BSQ44_22740	COG0246	Mannitol dehydrogenase
BSQ44_22750	COG1312	Catalyzes the dehydration of D-mannonate
BSQ44_22760	COG2115	Belongs to the xylose isomerase family
BSQ44_22765	COG1070	Carbohydrate kinase
BSQ44_22775	COG1280	lysine exporter protein (LysE YggA)
BSQ44_22780	COG0596	Alpha beta hydrolase
BSQ44_22800	COG0642	Histidine kinase
BSQ44_22835	COG0739	heme binding
BSQ44_22840	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_22870	COG0697	spore germination
BSQ44_22875	COG0542	response to heat
BSQ44_22885	COG2890	protein-(glutamine-N5) methyltransferase activity
BSQ44_22890	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BSQ44_22910	COG0527	aspartate kinase activity
BSQ44_22925	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BSQ44_22930	COG3742	Toxic component of a toxin-antitoxin (TA) module. An RNase
BSQ44_22950	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BSQ44_22965	COG2226	methyltransferase
BSQ44_22980	COG0494	nUDIX hydrolase
BSQ44_22990	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BSQ44_22995	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BSQ44_23000	COG0653	protein targeting
BSQ44_23020	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_23030	COG1238	metal cluster binding
BSQ44_23050	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BSQ44_23060	COG0697	spore germination
BSQ44_23070	COG0300	oxidoreductase activity
BSQ44_23100	COG2086	electron transfer activity
BSQ44_23105	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BSQ44_23110	COG1250	3-hydroxyacyl-CoA dehydrogenase
BSQ44_23120	COG3706	GGDEF domain
BSQ44_23120	COG4251	negative regulation of phosphorylation
BSQ44_23120	COG2203	Gaf domain
BSQ44_23120	COG5001	Diguanylate cyclase
BSQ44_23145	COG2884	Cell division ATP-binding protein ftsE
BSQ44_23185	COG0287	Prephenate dehydrogenase
BSQ44_23190	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BSQ44_23195	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BSQ44_23210	COG2226	methyltransferase
BSQ44_23215	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BSQ44_23240	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BSQ44_23305	COG4536	flavin adenine dinucleotide binding
BSQ44_23310	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BSQ44_23315	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BSQ44_23330	COG0825	malonyl-CoA metabolic process
BSQ44_23335	COG3034	peptidoglycan biosynthetic process
BSQ44_23340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BSQ44_23340	COG0425	Belongs to the sulfur carrier protein TusA family
BSQ44_23345	COG0523	cobalamin synthesis protein
BSQ44_23350	COG1686	Belongs to the peptidase S11 family
BSQ44_23355	COG1473	amidohydrolase
BSQ44_23375	COG0747	negative chemotaxis
BSQ44_23380	COG0601	transmembrane transport
BSQ44_23385	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BSQ44_23405	COG1744	ABC transporter substrate-binding protein PnrA-like
BSQ44_23415	COG1079	Belongs to the binding-protein-dependent transport system permease family
BSQ44_23420	COG1335	isochorismatase
BSQ44_23425	COG3845	ABC transporter
BSQ44_23430	COG1335	isochorismatase
BSQ44_23445	COG3842	ATPase activity
BSQ44_23450	COG1177	transmembrane transport
BSQ44_23455	COG1176	ABC-type spermidine putrescine transport system, permease component I
BSQ44_23470	COG0372	Belongs to the citrate synthase family
BSQ44_23475	COG0372	Belongs to the citrate synthase family
BSQ44_23495	COG2203	Gaf domain
BSQ44_23495	COG2200	EAL domain
BSQ44_23495	COG2199	diguanylate cyclase activity
BSQ44_23520	COG0798	PFAM Bile acid sodium symporter
BSQ44_23550	COG1042	CoA-binding domain protein
BSQ44_23550	COG0045	succinate-CoA ligase (ADP-forming) activity
BSQ44_23550	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BSQ44_23560	COG2217	Heavy metal translocating P-type atpase
BSQ44_23570	COG3118	belongs to the thioredoxin family
BSQ44_23610	COG1653	transport
BSQ44_23615	COG1175	transmembrane transport
BSQ44_23620	COG0395	ABC-type sugar transport system, permease component
BSQ44_23625	COG3842	ATPase activity
BSQ44_23635	COG1309	transcriptional regulator
BSQ44_23640	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BSQ44_23650	COG1233	COG1233 Phytoene dehydrogenase and related
BSQ44_23655	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BSQ44_23685	COG0346	lactoylglutathione lyase activity
BSQ44_23695	COG1597	lipid kinase activity
BSQ44_23715	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
BSQ44_23720	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BSQ44_23740	COG0784	Response regulator, receiver
BSQ44_23745	COG2202	Pas domain
BSQ44_23745	COG3920	Histidine kinase
BSQ44_23760	COG1129	ABC transporter
BSQ44_23765	COG4214	carbohydrate transport
BSQ44_23770	COG4213	ABC transporter substrate-binding protein
BSQ44_23795	COG0745	RESPONSE REGULATOR receiver
BSQ44_23800	COG0704	Plays a role in the regulation of phosphate uptake
BSQ44_23805	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BSQ44_23815	COG0573	inorganic phosphate transmembrane transporter activity
BSQ44_23825	COG2205	protein histidine kinase activity
BSQ44_23825	COG3437	response regulator, receiver
BSQ44_23825	COG3850	Histidine kinase
BSQ44_23825	COG4999	Histidine kinase
BSQ44_23830	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BSQ44_23840	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BSQ44_23855	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BSQ44_23880	COG2902	Dehydrogenase
BSQ44_23890	COG0138	bifunctional purine biosynthesis protein purh
BSQ44_23905	COG0501	Belongs to the peptidase M48B family
BSQ44_23935	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BSQ44_23940	COG5425	PFAM Usg family protein
BSQ44_23955	COG1692	metallophosphoesterase
BSQ44_23960	COG1253	flavin adenine dinucleotide binding
BSQ44_24120	COG2885	chlorophyll binding
BSQ44_24135	COG0784	Response regulator, receiver
BSQ44_24135	COG3437	response regulator, receiver
BSQ44_24385	COG2801	Transposase and inactivated derivatives
BSQ44_24405	COG0175	sulfate reduction
BSQ44_24410	COG3002	Belongs to the UPF0753 family
BSQ44_24415	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BSQ44_24420	COG0583	DNA-binding transcription factor activity
BSQ44_24460	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BSQ44_24520	COG0596	Alpha beta hydrolase
BSQ44_24540	COG2202	Pas domain
BSQ44_24540	COG3920	Histidine kinase
BSQ44_24560	COG4191	Histidine kinase
BSQ44_24560	COG0784	Response regulator, receiver
BSQ44_24595	COG1309	transcriptional regulator
BSQ44_24600	COG0586	Pfam SNARE associated Golgi protein
BSQ44_24610	COG2801	Transposase and inactivated derivatives
BSQ44_24615	COG3920	Histidine kinase
BSQ44_24655	COG3181	Tripartite tricarboxylate transporter family receptor
BSQ44_24660	COG2175	clavaminate synthase activity
BSQ44_24665	COG0583	DNA-binding transcription factor activity
BSQ44_24670	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BSQ44_24680	COG0583	DNA-binding transcription factor activity
BSQ44_24685	COG1053	succinate dehydrogenase
BSQ44_24705	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ44_24705	COG0473	3-isopropylmalate dehydrogenase activity
BSQ44_24715	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BSQ44_24730	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BSQ44_24745	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_24755	COG0583	DNA-binding transcription factor activity
BSQ44_24760	COG1053	succinate dehydrogenase
BSQ44_24765	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_24785	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
BSQ44_24790	COG1012	belongs to the aldehyde dehydrogenase family
BSQ44_24795	COG2072	flavoprotein involved in K transport
BSQ44_24800	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_24805	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_24810	COG0657	acetylesterase activity
BSQ44_24815	COG2072	flavoprotein involved in K transport
BSQ44_24830	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_24840	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_24845	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_24860	COG1047	Peptidyl-prolyl cis-trans
BSQ44_24880	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BSQ44_24885	COG0037	tRNA processing
BSQ44_24895	COG2885	chlorophyll binding
BSQ44_24910	COG0848	biopolymer transport protein
BSQ44_24920	COG0824	Thioesterase
BSQ44_24935	COG2255	four-way junction helicase activity
BSQ44_24940	COG0632	four-way junction helicase activity
BSQ44_24955	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
BSQ44_24975	COG0318	PFAM AMP-dependent synthetase and ligase
BSQ44_25015	COG0483	inositol monophosphate 1-phosphatase activity
BSQ44_25020	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_25030	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BSQ44_25045	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BSQ44_25060	COG0142	geranyltranstransferase activity
BSQ44_25065	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BSQ44_25070	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BSQ44_25080	COG0405	Gamma-glutamyltransferase
BSQ44_25095	COG0183	Belongs to the thiolase family
BSQ44_25100	COG1028	Short-chain dehydrogenase reductase Sdr
BSQ44_25110	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BSQ44_25120	COG3339	Conserved Protein
BSQ44_25125	COG2154	pterin-4-alpha-carbinolamine dehydratase
BSQ44_25140	COG4181	ATPase activity
BSQ44_25150	COG0670	Belongs to the BI1 family
BSQ44_25180	COG0583	DNA-binding transcription factor activity
BSQ44_25195	COG0640	Transcriptional regulator
BSQ44_25200	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
BSQ44_25210	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
BSQ44_25220	COG1570	exodeoxyribonuclease VII activity
BSQ44_25230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BSQ44_25240	COG4133	protoheme IX ABC transporter activity
BSQ44_25245	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BSQ44_25255	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BSQ44_25265	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BSQ44_25270	COG2378	regulation of single-species biofilm formation
BSQ44_25285	COG2917	probably involved in intracellular septation
BSQ44_25315	COG1388	LysM domain
BSQ44_25315	COG1376	ErfK ybiS ycfS ynhG family protein
BSQ44_25345	COG0789	Transcriptional regulator
BSQ44_25350	COG1914	H( )-stimulated, divalent metal cation uptake system
BSQ44_25380	COG2801	Transposase and inactivated derivatives
BSQ44_25390	COG0330	HflC and HflK could
BSQ44_25405	COG2217	Heavy metal translocating P-type atpase
BSQ44_25415	COG1999	signal sequence binding
BSQ44_25435	COG1276	copper resistance
BSQ44_25440	COG2801	Transposase and inactivated derivatives
BSQ44_25460	COG1999	signal sequence binding
BSQ44_25515	COG4634	DNA integration
BSQ44_25655	COG3831	ATPase activity
BSQ44_25705	COG1396	sequence-specific DNA binding
BSQ44_25735	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
BSQ44_25740	COG2948	multi-organism process
BSQ44_25745	COG3504	Conjugal transfer protein
BSQ44_25770	COG0741	lytic transglycosylase activity
BSQ44_25785	COG3838	Conjugal transfer protein Trbc
BSQ44_25790	COG0741	lytic transglycosylase activity
BSQ44_25825	COG2264	protein methyltransferase activity
BSQ44_25835	COG3852	Histidine kinase
BSQ44_25840	COG1192	Involved in chromosome partitioning
BSQ44_25850	COG0640	Transcriptional regulator
BSQ44_25880	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BSQ44_25895	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_25910	COG1959	2 iron, 2 sulfur cluster binding
BSQ44_25940	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BSQ44_25960	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
BSQ44_25960	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BSQ44_25965	COG0785	Cytochrome C biogenesis protein
BSQ44_26000	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BSQ44_26000	COG2010	Cytochrome c
BSQ44_26065	COG0739	heme binding
BSQ44_26065	COG0741	lytic transglycosylase activity
BSQ44_26065	COG1196	nuclear chromosome segregation
BSQ44_26070	COG4957	zinc ion binding
BSQ44_26090	COG2963	transposase activity
BSQ44_26095	COG3436	PFAM IS66 Orf2 family protein
BSQ44_26100	COG4372	Transposase
BSQ44_26125	COG0785	Cytochrome C biogenesis protein
BSQ44_26165	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BSQ44_26170	COG0785	Cytochrome C biogenesis protein
BSQ44_26185	COG1971	Probably functions as a manganese efflux pump