locus-tag class description HRU87_00005 PF00308 Bacterial dnaA protein HRU87_00005 PF08299 Bacterial dnaA protein helix-turn-helix HRU87_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HRU87_00010 PF02767 DNA polymerase III beta subunit, central domain HRU87_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HRU87_00015 PF02463 RecF/RecN/SMC N terminal domain HRU87_00020 PF05258 Dna[CI] antecedent, DciA HRU87_00025 PF01751 Toprim domain HRU87_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRU87_00025 PF00986 DNA gyrase B subunit, carboxyl terminus HRU87_00025 PF00204 DNA gyrase B HRU87_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller HRU87_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A HRU87_00060 PF13651 Adenine-specific methyltransferase EcoRI HRU87_00095 PF08501 Shikimate dehydrogenase substrate binding domain HRU87_00105 PF00892 EamA-like transporter family HRU87_00125 PF00378 Enoyl-CoA hydratase/isomerase HRU87_00130 PF02770 Acyl-CoA dehydrogenase, middle domain HRU87_00130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HRU87_00130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HRU87_00135 PF02803 Thiolase, C-terminal domain HRU87_00135 PF00108 Thiolase, N-terminal domain HRU87_00140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HRU87_00140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HRU87_00140 PF00378 Enoyl-CoA hydratase/isomerase HRU87_00155 PF00692 dUTPase HRU87_00180 PF00012 Hsp70 protein HRU87_00185 PF01025 GrpE HRU87_00190 PF00684 DnaJ central domain HRU87_00190 PF01556 DnaJ C terminal domain HRU87_00190 PF00226 DnaJ domain HRU87_00195 PF13411 MerR HTH family regulatory protein HRU87_00200 PF00004 ATPase family associated with various cellular activities (AAA) HRU87_00200 PF07724 AAA domain (Cdc48 subfamily) HRU87_00200 PF17871 AAA lid domain HRU87_00200 PF02861 Clp amino terminal domain, pathogenicity island component HRU87_00200 PF10431 C-terminal, D2-small domain, of ClpB protein HRU87_00215 PF00156 Phosphoribosyl transferase domain HRU87_00235 PF13344 Haloacid dehalogenase-like hydrolase HRU87_00245 PF00709 Adenylosuccinate synthetase HRU87_00260 PF00027 Cyclic nucleotide-binding domain HRU87_00260 PF07885 Ion channel HRU87_00265 PF13344 Haloacid dehalogenase-like hydrolase HRU87_00265 PF00293 NUDIX domain HRU87_00270 PF00255 Glutathione peroxidase HRU87_00280 PF00561 alpha/beta hydrolase fold HRU87_00285 PF08240 Alcohol dehydrogenase GroES-like domain HRU87_00285 PF00107 Zinc-binding dehydrogenase HRU87_00300 PF00248 Aldo/keto reductase family HRU87_00305 PF03350 Uncharacterized protein family, UPF0114 HRU87_00310 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRU87_00315 PF01850 PIN domain HRU87_00320 PF07676 WD40-like Beta Propeller Repeat HRU87_00320 PF00326 Prolyl oligopeptidase family HRU87_00335 PF05901 Excalibur calcium-binding domain HRU87_00375 PF00586 AIR synthase related protein, N-terminal domain HRU87_00375 PF02769 AIR synthase related protein, C-terminal domain HRU87_00375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HRU87_00385 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase HRU87_00415 PF01597 Glycine cleavage H-protein HRU87_00420 PF01571 Aminomethyltransferase folate-binding domain HRU87_00420 PF08669 Glycine cleavage T-protein C-terminal barrel domain HRU87_00425 PF01259 SAICAR synthetase HRU87_00430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HRU87_00430 PF02843 Phosphoribosylglycinamide synthetase, C domain HRU87_00430 PF02844 Phosphoribosylglycinamide synthetase, N domain HRU87_00435 PF04055 Radical SAM superfamily HRU87_00450 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_00455 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_00460 PF00067 Cytochrome P450 HRU87_00465 PF00881 Nitroreductase family HRU87_00465 PF01996 F420-0:Gamma-glutamyl ligase HRU87_00475 PF04227 Indigoidine synthase A like protein HRU87_00480 PF00294 pfkB family carbohydrate kinase HRU87_00485 PF01791 DeoC/LacD family aldolase HRU87_00490 PF00106 short chain dehydrogenase HRU87_00515 PF00171 Aldehyde dehydrogenase family HRU87_00520 PF00403 Heavy-metal-associated domain HRU87_00535 PF01022 Bacterial regulatory protein, arsR family HRU87_00540 PF00230 Major intrinsic protein HRU87_00545 PF01451 Low molecular weight phosphotyrosine protein phosphatase HRU87_00550 PF13439 Glycosyltransferase Family 4 HRU87_00550 PF00534 Glycosyl transferases group 1 HRU87_00555 PF09335 SNARE associated Golgi protein HRU87_00565 PF00486 Transcriptional regulatory protein, C terminal HRU87_00565 PF00072 Response regulator receiver domain HRU87_00575 PF09335 SNARE associated Golgi protein HRU87_00595 PF00483 Nucleotidyl transferase HRU87_00625 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HRU87_00625 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HRU87_00625 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HRU87_00640 PF00196 Bacterial regulatory proteins, luxR family HRU87_00640 PF00072 Response regulator receiver domain HRU87_00650 PF16363 GDP-mannose 4,6 dehydratase HRU87_00655 PF01370 NAD dependent epimerase/dehydratase family HRU87_00665 PF00535 Glycosyl transferase family 2 HRU87_00670 PF14437 MafB19-like deaminase HRU87_00680 PF03462 PCRF domain HRU87_00680 PF00472 RF-1 domain HRU87_00685 PF00005 ABC transporter HRU87_00690 PF02687 FtsX-like permease family HRU87_00690 PF18075 FtsX extracellular domain HRU87_00695 PF01668 SmpB protein HRU87_00700 PF04560 RNA polymerase Rpb2, domain 7 HRU87_00700 PF04563 RNA polymerase beta subunit HRU87_00700 PF04561 RNA polymerase Rpb2, domain 2 HRU87_00700 PF04565 RNA polymerase Rpb2, domain 3 HRU87_00700 PF10385 RNA polymerase beta subunit external 1 domain HRU87_00700 PF00562 RNA polymerase Rpb2, domain 6 HRU87_00705 PF04998 RNA polymerase Rpb1, domain 5 HRU87_00705 PF04997 RNA polymerase Rpb1, domain 1 HRU87_00705 PF00623 RNA polymerase Rpb1, domain 2 HRU87_00705 PF04983 RNA polymerase Rpb1, domain 3 HRU87_00705 PF05000 RNA polymerase Rpb1, domain 4 HRU87_00715 PF00164 Ribosomal protein S12/S23 HRU87_00720 PF00177 Ribosomal protein S7p/S5e HRU87_00725 PF00679 Elongation factor G C-terminus HRU87_00725 PF03764 Elongation factor G, domain IV HRU87_00725 PF03144 Elongation factor Tu domain 2 HRU87_00725 PF00009 Elongation factor Tu GTP binding domain HRU87_00725 PF14492 Elongation Factor G, domain II HRU87_00730 PF03143 Elongation factor Tu C-terminal domain HRU87_00730 PF00009 Elongation factor Tu GTP binding domain HRU87_00730 PF03144 Elongation factor Tu domain 2 HRU87_00735 PF00338 Ribosomal protein S10p/S20e HRU87_00740 PF00297 Ribosomal protein L3 HRU87_00745 PF00573 Ribosomal protein L4/L1 family HRU87_00750 PF00276 Ribosomal protein L23 HRU87_00755 PF00181 Ribosomal Proteins L2, RNA binding domain HRU87_00755 PF03947 Ribosomal Proteins L2, C-terminal domain HRU87_00760 PF00203 Ribosomal protein S19 HRU87_00765 PF00237 Ribosomal protein L22p/L17e HRU87_00770 PF07650 KH domain HRU87_00770 PF00189 Ribosomal protein S3, C-terminal domain HRU87_00775 PF00252 Ribosomal protein L16p/L10e HRU87_00780 PF00831 Ribosomal L29 protein HRU87_00785 PF00366 Ribosomal protein S17 HRU87_00790 PF00238 Ribosomal protein L14p/L23e HRU87_00795 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HRU87_00800 PF00281 Ribosomal protein L5 HRU87_00800 PF00673 ribosomal L5P family C-terminus HRU87_00805 PF00410 Ribosomal protein S8 HRU87_00810 PF00347 Ribosomal protein L6 HRU87_00815 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HRU87_00820 PF03719 Ribosomal protein S5, C-terminal domain HRU87_00820 PF00333 Ribosomal protein S5, N-terminal domain HRU87_00825 PF00327 Ribosomal protein L30p/L7e HRU87_00830 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HRU87_00835 PF00344 SecY translocase HRU87_00845 PF00557 Metallopeptidase family M24 HRU87_00850 PF01176 Translation initiation factor 1A / IF-1 HRU87_00855 PF00444 Ribosomal protein L36 HRU87_00860 PF00416 Ribosomal protein S13/S18 HRU87_00865 PF00411 Ribosomal protein S11 HRU87_00870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HRU87_00870 PF01000 RNA polymerase Rpb3/RpoA insert domain HRU87_00870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HRU87_00875 PF01196 Ribosomal protein L17 HRU87_00880 PF01416 tRNA pseudouridine synthase HRU87_00885 PF00572 Ribosomal protein L13 HRU87_00890 PF00380 Ribosomal protein S9/S16 HRU87_00895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRU87_00895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRU87_00895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRU87_00895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRU87_00905 PF00485 Phosphoribulokinase / Uridine kinase family HRU87_00910 PF01380 SIS domain HRU87_00915 PF01648 4'-phosphopantetheinyl transferase superfamily HRU87_00920 PF00842 Alanine racemase, C-terminal domain HRU87_00920 PF01168 Alanine racemase, N-terminal domain HRU87_00925 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HRU87_00930 PF00814 Glycoprotease family HRU87_00935 PF00814 Glycoprotease family HRU87_00950 PF00166 Chaperonin 10 Kd subunit HRU87_00955 PF00892 EamA-like transporter family HRU87_00970 PF00005 ABC transporter HRU87_00975 PF00005 ABC transporter HRU87_00975 PF12399 Branched-chain amino acid ATP-binding cassette transporter HRU87_00980 PF02653 Branched-chain amino acid transport system / permease component HRU87_00980 PF11862 Domain of unknown function (DUF3382) HRU87_00985 PF02653 Branched-chain amino acid transport system / permease component HRU87_00990 PF00571 CBS domain HRU87_00990 PF00478 IMP dehydrogenase / GMP reductase domain HRU87_00995 PF00478 IMP dehydrogenase / GMP reductase domain HRU87_01005 PF00381 PTS HPr component phosphorylation site HRU87_01010 PF02896 PEP-utilising enzyme, TIM barrel domain HRU87_01010 PF00391 PEP-utilising enzyme, mobile domain HRU87_01010 PF05524 PEP-utilising enzyme, N-terminal HRU87_01020 PF02540 NAD synthase HRU87_01020 PF00958 GMP synthase C terminal domain HRU87_01020 PF00117 Glutamine amidotransferase class-I HRU87_01030 PF00580 UvrD/REP helicase N-terminal domain HRU87_01030 PF13361 UvrD-like helicase C-terminal domain HRU87_01035 PF08442 ATP-grasp domain HRU87_01035 PF00549 CoA-ligase HRU87_01040 PF02629 CoA binding domain HRU87_01040 PF00549 CoA-ligase HRU87_01050 PF00551 Formyl transferase HRU87_01055 PF02142 MGS-like domain HRU87_01055 PF01808 AICARFT/IMPCHase bienzyme HRU87_01060 PF00484 Carbonic anhydrase HRU87_01065 PF00664 ABC transporter transmembrane region HRU87_01065 PF00005 ABC transporter HRU87_01070 PF00664 ABC transporter transmembrane region HRU87_01070 PF00005 ABC transporter HRU87_01075 PF00128 Alpha amylase, catalytic domain HRU87_01075 PF02806 Alpha amylase, C-terminal all-beta domain HRU87_01075 PF00686 Starch binding domain HRU87_01080 PF00180 Isocitrate/isopropylmalate dehydrogenase HRU87_01090 PF00551 Formyl transferase HRU87_01095 PF00464 Serine hydroxymethyltransferase HRU87_01100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HRU87_01100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HRU87_01105 PF03301 Tryptophan 2,3-dioxygenase HRU87_01110 PF00266 Aminotransferase class-V HRU87_01115 PF00664 ABC transporter transmembrane region HRU87_01115 PF00005 ABC transporter HRU87_01125 PF00005 ABC transporter HRU87_01135 PF01061 ABC-2 type transporter HRU87_01145 PF00885 6,7-dimethyl-8-ribityllumazine synthase HRU87_01150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HRU87_01150 PF00925 GTP cyclohydrolase II HRU87_01155 PF00677 Lumazine binding domain HRU87_01160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRU87_01160 PF01872 RibD C-terminal domain HRU87_01165 PF00579 tRNA synthetases class I (W and Y) HRU87_01180 PF13085 2Fe-2S iron-sulfur cluster binding domain HRU87_01185 PF02910 Fumarate reductase flavoprotein C-term HRU87_01185 PF00890 FAD binding domain HRU87_01195 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HRU87_01200 PF00483 Nucleotidyl transferase HRU87_01200 PF01050 Mannose-6-phosphate isomerase HRU87_01205 PF02608 ABC transporter substrate-binding protein PnrA-like HRU87_01210 PF00005 ABC transporter HRU87_01215 PF02653 Branched-chain amino acid transport system / permease component HRU87_01220 PF02653 Branched-chain amino acid transport system / permease component HRU87_01225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HRU87_01230 PF00591 Glycosyl transferase family, a/b domain HRU87_01230 PF02885 Glycosyl transferase family, helical bundle domain HRU87_01230 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HRU87_01235 PF00962 Adenosine/AMP deaminase HRU87_01240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRU87_01245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRU87_01255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRU87_01255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRU87_01255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRU87_01255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRU87_01260 PF01048 Phosphorylase superfamily HRU87_01265 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_01265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRU87_01270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRU87_01270 PF00364 Biotin-requiring enzyme HRU87_01270 PF00289 Biotin carboxylase, N-terminal domain HRU87_01270 PF02785 Biotin carboxylase C-terminal domain HRU87_01275 PF02545 Maf-like protein HRU87_01280 PF01938 TRAM domain HRU87_01280 PF05958 tRNA (Uracil-5-)-methyltransferase HRU87_01305 PF01039 Carboxyl transferase domain HRU87_01310 PF08279 HTH domain HRU87_01310 PF02237 Biotin protein ligase C terminal domain HRU87_01310 PF03099 Biotin/lipoate A/B protein ligase family HRU87_01315 PF02222 ATP-grasp domain HRU87_01315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HRU87_01320 PF00731 AIR carboxylase HRU87_01330 PF01476 LysM domain HRU87_01330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HRU87_01335 PF01370 NAD dependent epimerase/dehydratase family HRU87_01340 PF02467 Transcription factor WhiB HRU87_01360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRU87_01360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRU87_01360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRU87_01360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRU87_01365 PF05221 S-adenosyl-L-homocysteine hydrolase HRU87_01365 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HRU87_01370 PF00486 Transcriptional regulatory protein, C terminal HRU87_01370 PF00072 Response regulator receiver domain HRU87_01375 PF00672 HAMP domain HRU87_01375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRU87_01375 PF00512 His Kinase A (phospho-acceptor) domain HRU87_01380 PF10647 Lipoprotein LpqB beta-propeller domain HRU87_01380 PF10646 Sporulation and spore germination HRU87_01390 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HRU87_01390 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus HRU87_01395 PF01043 SecA preprotein cross-linking domain HRU87_01395 PF07516 SecA Wing and Scaffold domain HRU87_01395 PF07517 SecA DEAD-like domain HRU87_01415 PF12282 Signal transduction histidine kinase HRU87_01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRU87_01415 PF07568 Histidine kinase HRU87_01430 PF00005 ABC transporter HRU87_01440 PF00809 Pterin binding enzyme HRU87_01440 PF02574 Homocysteine S-methyltransferase HRU87_01440 PF02965 Vitamin B12 dependent methionine synthase, activation domain HRU87_01440 PF02607 B12 binding domain HRU87_01440 PF02310 B12 binding domain HRU87_01455 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_01460 PF00005 ABC transporter HRU87_01470 PF09335 SNARE associated Golgi protein HRU87_01490 PF00005 ABC transporter HRU87_01505 PF00005 ABC transporter HRU87_01510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRU87_01510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRU87_01515 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HRU87_01515 PF01266 FAD dependent oxidoreductase HRU87_01530 PF13090 Polyphosphate kinase C-terminal domain 2 HRU87_01530 PF17941 Polyphosphate kinase C-terminal domain 1 HRU87_01530 PF13089 Polyphosphate kinase N-terminal domain HRU87_01530 PF02503 Polyphosphate kinase middle domain HRU87_01535 PF00486 Transcriptional regulatory protein, C terminal HRU87_01545 PF08768 Domain of unknown function (DUF1794) HRU87_01560 PF00300 Histidine phosphatase superfamily (branch 1) HRU87_01565 PF01895 PhoU domain HRU87_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRU87_01570 PF00512 His Kinase A (phospho-acceptor) domain HRU87_01575 PF00072 Response regulator receiver domain HRU87_01575 PF00486 Transcriptional regulatory protein, C terminal HRU87_01585 PF02559 CarD-like/TRCF domain HRU87_01590 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HRU87_01590 PF02542 YgbB family HRU87_01595 PF09190 DALR domain HRU87_01595 PF01406 tRNA synthetases class I (C) catalytic domain HRU87_01600 PF00588 SpoU rRNA Methylase family HRU87_01600 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRU87_01610 PF00005 ABC transporter HRU87_01610 PF17912 MalK OB fold domain HRU87_01640 PF10415 Fumarase C C-terminus HRU87_01640 PF00206 Lyase HRU87_01660 PF01641 SelR domain HRU87_01665 PF00313 'Cold-shock' DNA-binding domain HRU87_01670 PF00118 TCP-1/cpn60 chaperonin family HRU87_01675 PF00512 His Kinase A (phospho-acceptor) domain HRU87_01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRU87_01675 PF00672 HAMP domain HRU87_01680 PF00072 Response regulator receiver domain HRU87_01680 PF00486 Transcriptional regulatory protein, C terminal HRU87_01700 PF00313 'Cold-shock' DNA-binding domain HRU87_01710 PF00266 Aminotransferase class-V HRU87_01715 PF01325 Iron dependent repressor, N-terminal DNA binding domain HRU87_01715 PF18357 Diphteria toxin repressor SH3 domain HRU87_01715 PF02742 Iron dependent repressor, metal binding and dimerisation domain HRU87_01720 PF00877 NlpC/P60 family HRU87_01755 PF01812 5-formyltetrahydrofolate cyclo-ligase family HRU87_01775 PF08338 Domain of unknown function (DUF1731) HRU87_01775 PF01370 NAD dependent epimerase/dehydratase family HRU87_01780 PF03741 Integral membrane protein TerC family HRU87_01790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase HRU87_01790 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase HRU87_01795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HRU87_01800 PF09334 tRNA synthetases class I (M) HRU87_01800 PF08264 Anticodon-binding domain of tRNA HRU87_01805 PF01026 TatD related DNase HRU87_01810 PF00398 Ribosomal RNA adenine dimethylase HRU87_01815 PF08544 GHMP kinases C terminal HRU87_01815 PF00288 GHMP kinases N terminal domain HRU87_01820 PF00005 ABC transporter HRU87_01820 PF16326 ABC transporter C-terminal domain HRU87_01820 PF12848 ABC transporter HRU87_01830 PF12804 MobA-like NTP transferase domain HRU87_01835 PF14572 Phosphoribosyl synthetase-associated domain HRU87_01835 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HRU87_01840 PF13520 Amino acid permease HRU87_01845 PF01386 Ribosomal L25p family HRU87_01845 PF14693 Ribosomal protein TL5, C-terminal domain HRU87_01850 PF01195 Peptidyl-tRNA hydrolase HRU87_01855 PF00271 Helicase conserved C-terminal domain HRU87_01855 PF00270 DEAD/DEAH box helicase HRU87_01855 PF17757 UvrB interaction domain HRU87_01855 PF03461 TRCF domain HRU87_01855 PF02559 CarD-like/TRCF domain HRU87_01860 PF03819 MazG nucleotide pyrophosphohydrolase domain HRU87_01870 PF16859 Tetracyclin repressor-like, C-terminal domain HRU87_01870 PF00440 Bacterial regulatory proteins, tetR family HRU87_01875 PF13393 Histidyl-tRNA synthetase HRU87_01880 PF00113 Enolase, C-terminal TIM barrel domain HRU87_01880 PF03952 Enolase, N-terminal domain HRU87_01895 PF00082 Subtilase family HRU87_01910 PF04011 LemA family HRU87_01915 PF01435 Peptidase family M48 HRU87_01920 PF13291 ACT domain HRU87_01920 PF00291 Pyridoxal-phosphate dependent enzyme HRU87_01925 PF01272 Transcription elongation factor, GreA/GreB, C-term HRU87_01925 PF03449 Transcription elongation factor, N-terminal HRU87_01940 PF03006 Haemolysin-III related HRU87_01945 PF01255 Putative undecaprenyl diphosphate synthase HRU87_01950 PF13638 PIN domain HRU87_01950 PF02562 PhoH-like protein HRU87_01960 PF00206 Lyase HRU87_01960 PF10415 Fumarase C C-terminus HRU87_01965 PF00484 Carbonic anhydrase HRU87_01975 PF02609 Exonuclease VII small subunit HRU87_01980 PF13742 OB-fold nucleic acid binding domain HRU87_01980 PF02601 Exonuclease VII, large subunit HRU87_01985 PF02401 LytB protein HRU87_01995 PF01116 Fructose-bisphosphate aldolase class-II HRU87_02000 PF00294 pfkB family carbohydrate kinase HRU87_02005 PF02646 RmuC family HRU87_02010 PF01541 GIY-YIG catalytic domain HRU87_02010 PF00929 Exonuclease HRU87_02015 PF01926 50S ribosome-binding GTPase HRU87_02015 PF06071 Protein of unknown function (DUF933) HRU87_02040 PF00132 Bacterial transferase hexapeptide (six repeats) HRU87_02045 PF00291 Pyridoxal-phosphate dependent enzyme HRU87_02055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HRU87_02060 PF07690 Major Facilitator Superfamily HRU87_02065 PF00459 Inositol monophosphatase family HRU87_02070 PF03193 RsgA GTPase HRU87_02075 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRU87_02080 PF04542 Sigma-70 region 2 HRU87_02080 PF08281 Sigma-70, region 4 HRU87_02095 PF00676 Dehydrogenase E1 component HRU87_02095 PF02779 Transketolase, pyrimidine binding domain HRU87_02095 PF16870 2-oxoglutarate dehydrogenase C-terminal HRU87_02095 PF16078 2-oxoglutarate dehydrogenase N-terminus HRU87_02095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRU87_02100 PF00571 CBS domain HRU87_02100 PF03471 Transporter associated domain HRU87_02100 PF01595 Cyclin M transmembrane N-terminal domain HRU87_02105 PF00571 CBS domain HRU87_02105 PF01595 Cyclin M transmembrane N-terminal domain HRU87_02110 PF00664 ABC transporter transmembrane region HRU87_02110 PF00005 ABC transporter HRU87_02115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HRU87_02125 PF00561 alpha/beta hydrolase fold HRU87_02130 PF01053 Cys/Met metabolism PLP-dependent enzyme HRU87_02135 PF01546 Peptidase family M20/M25/M40 HRU87_02135 PF07687 Peptidase dimerisation domain HRU87_02140 PF03167 Uracil DNA glycosylase superfamily HRU87_02150 PF08220 DeoR-like helix-turn-helix domain HRU87_02150 PF00455 DeoR C terminal sensor domain HRU87_02155 PF16874 Glycosyl hydrolase family 36 C-terminal domain HRU87_02155 PF16875 Glycosyl hydrolase family 36 N-terminal domain HRU87_02160 PF08532 Beta-galactosidase trimerisation domain HRU87_02160 PF08533 Beta-galactosidase C-terminal domain HRU87_02160 PF02449 Beta-galactosidase HRU87_02165 PF02661 Fic/DOC family HRU87_02165 PF13784 Fic/DOC family N-terminal HRU87_02175 PF00437 Type II/IV secretion system protein HRU87_02215 PF00892 EamA-like transporter family HRU87_02225 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_02230 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_02230 PF12911 N-terminal TM domain of oligopeptide transport permease C HRU87_02240 PF00005 ABC transporter HRU87_02240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HRU87_02245 PF03102 NeuB family HRU87_02245 PF08666 SAF domain HRU87_02250 PF01370 NAD dependent epimerase/dehydratase family HRU87_02250 PF02911 Formyl transferase, C-terminal domain HRU87_02250 PF00551 Formyl transferase HRU87_02260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRU87_02265 PF02719 Polysaccharide biosynthesis protein HRU87_02270 PF02348 Cytidylyltransferase HRU87_02285 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HRU87_02290 PF05523 WxcM-like, C-terminal HRU87_02295 PF00483 Nucleotidyl transferase HRU87_02300 PF16363 GDP-mannose 4,6 dehydratase HRU87_02315 PF00009 Elongation factor Tu GTP binding domain HRU87_02315 PF03144 Elongation factor Tu domain 2 HRU87_02315 PF14492 Elongation Factor G, domain II HRU87_02315 PF00679 Elongation factor G C-terminus HRU87_02320 PF06470 SMC proteins Flexible Hinge Domain HRU87_02320 PF02463 RecF/RecN/SMC N terminal domain HRU87_02325 PF00448 SRP54-type protein, GTPase domain HRU87_02325 PF02881 SRP54-type protein, helical bundle domain HRU87_02340 PF00037 4Fe-4S binding domain HRU87_02345 PF00155 Aminotransferase class I and II HRU87_02350 PF00285 Citrate synthase, C-terminal domain HRU87_02360 PF17191 RecG wedge domain HRU87_02360 PF00270 DEAD/DEAH box helicase HRU87_02360 PF00271 Helicase conserved C-terminal domain HRU87_02365 PF01467 Cytidylyltransferase-like HRU87_02375 PF01783 Ribosomal L32p protein family HRU87_02380 PF00035 Double-stranded RNA binding motif HRU87_02380 PF14622 Ribonuclease-III-like HRU87_02385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HRU87_02385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HRU87_02385 PF06827 Zinc finger found in FPG and IleRS HRU87_02395 PF02881 SRP54-type protein, helical bundle domain HRU87_02395 PF02978 Signal peptide binding domain HRU87_02395 PF00448 SRP54-type protein, GTPase domain HRU87_02405 PF00886 Ribosomal protein S16 HRU87_02415 PF01782 RimM N-terminal domain HRU87_02420 PF01746 tRNA (Guanine-1)-methyltransferase HRU87_02425 PF01245 Ribosomal protein L19 HRU87_02430 PF10502 Signal peptidase, peptidase S26 HRU87_02435 PF01351 Ribonuclease HII HRU87_02440 PF10611 Protein of unknown function (DUF2469) HRU87_02450 PF02899 Phage integrase, N-terminal SAM-like domain HRU87_02450 PF00589 Phage integrase family HRU87_02460 PF00318 Ribosomal protein S2 HRU87_02465 PF00889 Elongation factor TS HRU87_02470 PF00696 Amino acid kinase family HRU87_02475 PF01765 Ribosome recycling factor HRU87_02505 PF01594 AI-2E family transporter HRU87_02525 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRU87_02525 PF00128 Alpha amylase, catalytic domain HRU87_02525 PF02806 Alpha amylase, C-terminal all-beta domain HRU87_02530 PF11896 Domain of unknown function (DUF3416) HRU87_02535 PF00128 Alpha amylase, catalytic domain HRU87_02535 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HRU87_02540 PF00266 Aminotransferase class-V HRU87_02550 PF01653 NAD-dependent DNA ligase adenylation domain HRU87_02550 PF03120 NAD-dependent DNA ligase OB-fold domain HRU87_02550 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HRU87_02550 PF12826 Helix-hairpin-helix motif HRU87_02555 PF02686 Glu-tRNAGln amidotransferase C subunit HRU87_02560 PF01425 Amidase HRU87_02565 PF02934 GatB/GatE catalytic domain HRU87_02565 PF02637 GatB domain HRU87_02575 PF00929 Exonuclease HRU87_02580 PF00873 AcrB/AcrD/AcrF family HRU87_02585 PF00171 Aldehyde dehydrogenase family HRU87_02595 PF00072 Response regulator receiver domain HRU87_02595 PF00196 Bacterial regulatory proteins, luxR family HRU87_02625 PF00271 Helicase conserved C-terminal domain HRU87_02625 PF00270 DEAD/DEAH box helicase HRU87_02645 PF01048 Phosphorylase superfamily HRU87_02665 PF01266 FAD dependent oxidoreductase HRU87_02670 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_02675 PF00005 ABC transporter HRU87_02685 PF00764 Arginosuccinate synthase HRU87_02695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HRU87_02695 PF01276 Orn/Lys/Arg decarboxylase, major domain HRU87_02700 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_02710 PF00005 ABC transporter HRU87_02720 PF04371 Porphyromonas-type peptidyl-arginine deiminase HRU87_02725 PF00795 Carbon-nitrogen hydrolase HRU87_02730 PF00282 Pyridoxal-dependent decarboxylase conserved domain HRU87_02740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HRU87_02740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HRU87_02750 PF00085 Thioredoxin HRU87_02760 PF01625 Peptide methionine sulfoxide reductase HRU87_02765 PF00436 Single-strand binding protein family HRU87_02770 PF00005 ABC transporter HRU87_02770 PF12848 ABC transporter HRU87_02785 PF01152 Bacterial-like globin HRU87_02790 PF00924 Mechanosensitive ion channel HRU87_02795 PF11838 ERAP1-like C-terminal domain HRU87_02795 PF01433 Peptidase family M1 domain HRU87_02800 PF00999 Sodium/hydrogen exchanger family HRU87_02810 PF02502 Ribose/Galactose Isomerase HRU87_02815 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HRU87_02815 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HRU87_02815 PF06827 Zinc finger found in FPG and IleRS HRU87_02830 PF05698 Bacterial trigger factor protein (TF) C-terminus HRU87_02830 PF05697 Bacterial trigger factor protein (TF) HRU87_02830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRU87_02835 PF00574 Clp protease HRU87_02840 PF00574 Clp protease HRU87_02845 PF07724 AAA domain (Cdc48 subfamily) HRU87_02845 PF10431 C-terminal, D2-small domain, of ClpB protein HRU87_02845 PF06689 ClpX C4-type zinc finger HRU87_02850 PF03594 Benzoate membrane transport protein HRU87_02855 PF01432 Peptidase family M3 HRU87_02860 PF08264 Anticodon-binding domain of tRNA HRU87_02860 PF00133 tRNA synthetases class I (I, L, M and V) HRU87_02865 PF08264 Anticodon-binding domain of tRNA HRU87_02865 PF00133 tRNA synthetases class I (I, L, M and V) HRU87_02870 PF08245 Mur ligase middle domain HRU87_02870 PF02875 Mur ligase family, glutamate ligase domain HRU87_02880 PF00334 Nucleoside diphosphate kinase HRU87_02890 PF10150 Ribonuclease E/G family HRU87_02895 PF00829 Ribosomal prokaryotic L21 protein HRU87_02900 PF01016 Ribosomal L27 protein HRU87_02905 PF01926 50S ribosome-binding GTPase HRU87_02905 PF01018 GTP1/OBG HRU87_02905 PF09269 Domain of unknown function (DUF1967) HRU87_02910 PF00696 Amino acid kinase family HRU87_02915 PF00171 Aldehyde dehydrogenase family HRU87_02925 PF01467 Cytidylyltransferase-like HRU87_02945 PF02594 Uncharacterised ACR, YggU family COG1872 HRU87_02950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRU87_02955 PF01738 Dienelactone hydrolase family HRU87_02965 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRU87_02965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRU87_02965 PF14579 Helix-hairpin-helix motif HRU87_02965 PF02811 PHP domain HRU87_02975 PF02586 SOS response associated peptidase (SRAP) HRU87_02980 PF01063 Amino-transferase class IV HRU87_02985 PF04715 Anthranilate synthase component I, N terminal region HRU87_02985 PF00425 chorismate binding enzyme HRU87_02985 PF00117 Glutamine amidotransferase class-I HRU87_02990 PF13603 Leucyl-tRNA synthetase, Domain 2 HRU87_02990 PF00133 tRNA synthetases class I (I, L, M and V) HRU87_02990 PF09334 tRNA synthetases class I (M) HRU87_02990 PF08264 Anticodon-binding domain of tRNA HRU87_03000 PF00753 Metallo-beta-lactamase superfamily HRU87_03010 PF01649 Ribosomal protein S20 HRU87_03015 PF06421 GTP-binding protein LepA C-terminus HRU87_03015 PF00679 Elongation factor G C-terminus HRU87_03015 PF00009 Elongation factor Tu GTP binding domain HRU87_03020 PF04055 Radical SAM superfamily HRU87_03025 PF01628 HrcA protein C terminal domain HRU87_03030 PF00226 DnaJ domain HRU87_03030 PF01556 DnaJ C terminal domain HRU87_03030 PF00684 DnaJ central domain HRU87_03035 PF04452 RNA methyltransferase HRU87_03040 PF01230 HIT domain HRU87_03045 PF02562 PhoH-like protein HRU87_03050 PF02130 Uncharacterized protein family UPF0054 HRU87_03055 PF01595 Cyclin M transmembrane N-terminal domain HRU87_03055 PF00571 CBS domain HRU87_03055 PF03471 Transporter associated domain HRU87_03060 PF07650 KH domain HRU87_03060 PF01926 50S ribosome-binding GTPase HRU87_03065 PF08502 LeuA allosteric (dimerisation) domain HRU87_03065 PF00682 HMGL-like HRU87_03070 PF11967 Recombination protein O N terminal HRU87_03070 PF02565 Recombination protein O C terminal HRU87_03075 PF01255 Putative undecaprenyl diphosphate synthase HRU87_03080 PF03129 Anticodon binding domain HRU87_03080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRU87_03085 PF01207 Dihydrouridine synthase (Dus) HRU87_03090 PF01966 HD domain HRU87_03090 PF13286 Phosphohydrolase-associated domain HRU87_03095 PF08275 DNA primase catalytic core, N-terminal domain HRU87_03095 PF01807 CHC2 zinc finger HRU87_03095 PF13662 Toprim domain HRU87_03095 PF08278 DNA primase DnaG DnaB-binding HRU87_03095 PF10410 DnaB-helicase binding domain of primase HRU87_03115 PF01327 Polypeptide deformylase HRU87_03125 PF13439 Glycosyltransferase Family 4 HRU87_03125 PF00534 Glycosyl transferases group 1 HRU87_03135 PF00265 Thymidine kinase HRU87_03145 PF00109 Beta-ketoacyl synthase, N-terminal domain HRU87_03145 PF02801 Beta-ketoacyl synthase, C-terminal domain HRU87_03150 PF00550 Phosphopantetheine attachment site HRU87_03155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HRU87_03155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HRU87_03160 PF00698 Acyl transferase domain HRU87_03165 PF17853 GGDEF-like domain HRU87_03165 PF13556 PucR C-terminal helix-turn-helix domain HRU87_03170 PF17831 Pyruvate dehydrogenase E1 component middle domain HRU87_03170 PF00456 Transketolase, thiamine diphosphate binding domain HRU87_03175 PF00578 AhpC/TSA family HRU87_03190 PF01784 NIF3 (NGG1p interacting factor 3) HRU87_03200 PF00300 Histidine phosphatase superfamily (branch 1) HRU87_03200 PF13456 Reverse transcriptase-like HRU87_03210 PF00480 ROK family HRU87_03215 PF00557 Metallopeptidase family M24 HRU87_03225 PF02548 Ketopantoate hydroxymethyltransferase HRU87_03230 PF00795 Carbon-nitrogen hydrolase HRU87_03230 PF02540 NAD synthase HRU87_03235 PF00120 Glutamine synthetase, catalytic domain HRU87_03235 PF03951 Glutamine synthetase, beta-Grasp domain HRU87_03240 PF03710 Glutamate-ammonia ligase adenylyltransferase HRU87_03240 PF08335 GlnD PII-uridylyltransferase HRU87_03245 PF00120 Glutamine synthetase, catalytic domain HRU87_03245 PF03951 Glutamine synthetase, beta-Grasp domain HRU87_03255 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HRU87_03255 PF04055 Radical SAM superfamily HRU87_03260 PF03099 Biotin/lipoate A/B protein ligase family HRU87_03265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRU87_03265 PF02817 e3 binding domain HRU87_03265 PF00364 Biotin-requiring enzyme HRU87_03270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRU87_03270 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_03275 PF02789 Cytosol aminopeptidase family, N-terminal domain HRU87_03275 PF00883 Cytosol aminopeptidase family, catalytic domain HRU87_03285 PF00140 Sigma-70 factor, region 1.2 HRU87_03285 PF04542 Sigma-70 region 2 HRU87_03285 PF04539 Sigma-70 region 3 HRU87_03285 PF04545 Sigma-70, region 4 HRU87_03290 PF08245 Mur ligase middle domain HRU87_03290 PF02875 Mur ligase family, glutamate ligase domain HRU87_03305 PF00204 DNA gyrase B HRU87_03305 PF00986 DNA gyrase B subunit, carboxyl terminus HRU87_03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HRU87_03305 PF01751 Toprim domain HRU87_03310 PF00521 DNA gyrase/topoisomerase IV, subunit A HRU87_03310 PF03989 DNA gyrase C-terminal domain, beta-propeller HRU87_03335 PF00692 dUTPase HRU87_03350 PF00694 Aconitase C-terminal domain HRU87_03350 PF00330 Aconitase family (aconitate hydratase) HRU87_03355 PF02780 Transketolase, C-terminal domain HRU87_03355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HRU87_03355 PF02779 Transketolase, pyrimidine binding domain HRU87_03360 PF01612 3'-5' exonuclease HRU87_03360 PF00570 HRDC domain HRU87_03375 PF02657 Fe-S metabolism associated domain HRU87_03380 PF00581 Rhodanese-like domain HRU87_03390 PF06965 Na+/H+ antiporter 1 HRU87_03395 PF00909 Ammonium Transporter Family HRU87_03400 PF00909 Ammonium Transporter Family HRU87_03420 PF00565 Staphylococcal nuclease homologue HRU87_03420 PF02872 5'-nucleotidase, C-terminal domain HRU87_03420 PF00746 LPXTG cell wall anchor motif HRU87_03420 PF00149 Calcineurin-like phosphoesterase HRU87_03425 PF06039 Malate:quinone oxidoreductase (Mqo) HRU87_03435 PF03129 Anticodon binding domain HRU87_03435 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRU87_03435 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRU87_03440 PF01230 HIT domain HRU87_03445 PF01680 SOR/SNZ family HRU87_03450 PF01174 SNO glutamine amidotransferase family HRU87_03455 PF01709 Transcriptional regulator HRU87_03460 PF02075 Crossover junction endodeoxyribonuclease RuvC HRU87_03465 PF07499 RuvA, C-terminal domain HRU87_03465 PF01330 RuvA N terminal domain HRU87_03470 PF05491 RuvB C-terminal winged helix domain HRU87_03470 PF05496 Holliday junction DNA helicase RuvB P-loop domain HRU87_03470 PF17864 RuvB AAA lid domain HRU87_03475 PF02699 Preprotein translocase subunit HRU87_03480 PF07549 SecD/SecF GG Motif HRU87_03480 PF02355 Protein export membrane protein HRU87_03485 PF07549 SecD/SecF GG Motif HRU87_03485 PF02355 Protein export membrane protein HRU87_03490 PF13291 ACT domain HRU87_03490 PF02824 TGS domain HRU87_03490 PF04607 Region found in RelA / SpoT proteins HRU87_03500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRU87_03505 PF16193 AAA C-terminal domain HRU87_03505 PF12002 MgsA AAA+ ATPase C terminal HRU87_03505 PF00004 ATPase family associated with various cellular activities (AAA) HRU87_03510 PF00163 Ribosomal protein S4/S9 N-terminal domain HRU87_03510 PF01479 S4 domain HRU87_03525 PF02272 DHHA1 domain HRU87_03525 PF01411 tRNA synthetases class II (A) HRU87_03525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HRU87_03530 PF03652 Holliday junction resolvase HRU87_03540 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HRU87_03540 PF08501 Shikimate dehydrogenase substrate binding domain HRU87_03545 PF01264 Chorismate synthase HRU87_03550 PF01761 3-dehydroquinate synthase HRU87_03550 PF01202 Shikimate kinase HRU87_03555 PF01761 3-dehydroquinate synthase HRU87_03560 PF01220 Dehydroquinase class II HRU87_03565 PF09285 Elongation factor P, C-terminal HRU87_03565 PF08207 Elongation factor P (EF-P) KOW-like domain HRU87_03565 PF01132 Elongation factor P (EF-P) OB domain HRU87_03570 PF01029 NusB family HRU87_03575 PF00156 Phosphoribosyl transferase domain HRU87_03580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRU87_03580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRU87_03585 PF01979 Amidohydrolase family HRU87_03595 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HRU87_03595 PF00117 Glutamine amidotransferase class-I HRU87_03600 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRU87_03600 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HRU87_03600 PF02142 MGS-like domain HRU87_03605 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HRU87_03610 PF00625 Guanylate kinase HRU87_03615 PF01192 RNA polymerase Rpb6 HRU87_03620 PF04127 DNA / pantothenate metabolism flavoprotein HRU87_03620 PF02441 Flavoprotein HRU87_03625 PF00438 S-adenosylmethionine synthetase, N-terminal domain HRU87_03625 PF02772 S-adenosylmethionine synthetase, central domain HRU87_03625 PF02773 S-adenosylmethionine synthetase, C-terminal domain HRU87_03630 PF17764 3′ DNA-binding domain (3′BD) HRU87_03635 PF00551 Formyl transferase HRU87_03635 PF02911 Formyl transferase, C-terminal domain HRU87_03640 PF01029 NusB family HRU87_03640 PF01189 16S rRNA methyltransferase RsmB/F HRU87_03645 PF00834 Ribulose-phosphate 3 epimerase family HRU87_03650 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HRU87_03655 PF01634 ATP phosphoribosyltransferase HRU87_03655 PF08029 HisG, C-terminal domain HRU87_03660 PF00977 Histidine biosynthesis protein HRU87_03665 PF01502 Phosphoribosyl-AMP cyclohydrolase HRU87_03670 PF04715 Anthranilate synthase component I, N terminal region HRU87_03670 PF00425 chorismate binding enzyme HRU87_03685 PF00218 Indole-3-glycerol phosphate synthase HRU87_03690 PF00291 Pyridoxal-phosphate dependent enzyme HRU87_03695 PF00290 Tryptophan synthase alpha chain HRU87_03700 PF01790 Prolipoprotein diacylglyceryl transferase HRU87_03705 PF01493 GXGXG motif HRU87_03705 PF01645 Conserved region in glutamate synthase HRU87_03705 PF00310 Glutamine amidotransferases class-II HRU87_03705 PF04898 Glutamate synthase central domain HRU87_03710 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HRU87_03710 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_03715 PF00224 Pyruvate kinase, barrel domain HRU87_03715 PF02887 Pyruvate kinase, alpha/beta domain HRU87_03725 PF00072 Response regulator receiver domain HRU87_03725 PF03861 ANTAR domain HRU87_03730 PF03061 Thioesterase superfamily HRU87_03735 PF00476 DNA polymerase family A HRU87_03735 PF01367 5'-3' exonuclease, C-terminal SAM fold HRU87_03735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HRU87_03740 PF00575 S1 RNA binding domain HRU87_03745 PF01121 Dephospho-CoA kinase HRU87_03750 PF00271 Helicase conserved C-terminal domain HRU87_03750 PF02151 UvrB/uvrC motif HRU87_03750 PF17757 UvrB interaction domain HRU87_03750 PF12344 Ultra-violet resistance protein B HRU87_03750 PF04851 Type III restriction enzyme, res subunit HRU87_03755 PF17755 UvrA DNA-binding domain HRU87_03755 PF17760 UvrA interaction domain HRU87_03755 PF00005 ABC transporter HRU87_03765 PF03668 P-loop ATPase protein family HRU87_03770 PF02650 WhiA C-terminal HTH domain HRU87_03770 PF10298 WhiA N-terminal LAGLIDADG-like domain HRU87_03770 PF14527 WhiA LAGLIDADG-like domain HRU87_03775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HRU87_03775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HRU87_03780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HRU87_03780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HRU87_03785 PF00162 Phosphoglycerate kinase HRU87_03790 PF00121 Triosephosphate isomerase HRU87_03795 PF03840 Preprotein translocase SecG subunit HRU87_03805 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HRU87_03815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HRU87_03815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HRU87_03820 PF00342 Phosphoglucose isomerase HRU87_03825 PF00923 Transaldolase/Fructose-6-phosphate aldolase HRU87_03830 PF02779 Transketolase, pyrimidine binding domain HRU87_03830 PF02780 Transketolase, C-terminal domain HRU87_03830 PF00456 Transketolase, thiamine diphosphate binding domain HRU87_03835 PF01040 UbiA prenyltransferase family HRU87_03840 PF03441 FAD binding domain of DNA photolyase HRU87_03840 PF00875 DNA photolyase HRU87_03850 PF01458 Uncharacterized protein family (UPF0051) HRU87_03855 PF01458 Uncharacterized protein family (UPF0051) HRU87_03860 PF00355 Rieske [2Fe-2S] domain HRU87_03865 PF00005 ABC transporter HRU87_03870 PF01883 Iron-sulfur cluster assembly protein HRU87_03875 PF02632 BioY family HRU87_03905 PF00483 Nucleotidyl transferase HRU87_03910 PF00534 Glycosyl transferases group 1 HRU87_03910 PF13439 Glycosyltransferase Family 4 HRU87_03915 PF00005 ABC transporter HRU87_03920 PF01197 Ribosomal protein L31 HRU87_03925 PF00929 Exonuclease HRU87_03940 PF00300 Histidine phosphatase superfamily (branch 1) HRU87_03945 PF02146 Sir2 family HRU87_03960 PF02673 Bacitracin resistance protein BacA HRU87_03970 PF13419 Haloacid dehalogenase-like hydrolase HRU87_03975 PF08704 tRNA methyltransferase complex GCD14 subunit HRU87_03980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HRU87_03985 PF13280 WYL domain HRU87_03990 PF13280 WYL domain HRU87_04000 PF02416 mttA/Hcf106 family HRU87_04005 PF00902 Sec-independent protein translocase protein (TatC) HRU87_04010 PF00271 Helicase conserved C-terminal domain HRU87_04010 PF08148 DSHCT (NUC185) domain HRU87_04010 PF00270 DEAD/DEAH box helicase HRU87_04015 PF00795 Carbon-nitrogen hydrolase HRU87_04020 PF00535 Glycosyl transferase family 2 HRU87_04025 PF13397 RNA polymerase-binding protein HRU87_04040 PF00293 NUDIX domain HRU87_04045 PF02885 Glycosyl transferase family, helical bundle domain HRU87_04045 PF00591 Glycosyl transferase family, a/b domain HRU87_04050 PF00510 Cytochrome c oxidase subunit III HRU87_04055 PF00034 Cytochrome c HRU87_04055 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HRU87_04060 PF00355 Rieske [2Fe-2S] domain HRU87_04065 PF13631 Cytochrome b(N-terminal)/b6/petB HRU87_04075 PF00857 Isochorismatase family HRU87_04080 PF12270 Cytochrome c oxidase subunit IV HRU87_04085 PF00115 Cytochrome C and Quinol oxidase polypeptide I HRU87_04090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HRU87_04095 PF01521 Iron-sulphur cluster biosynthesis HRU87_04100 PF07687 Peptidase dimerisation domain HRU87_04100 PF01546 Peptidase family M20/M25/M40 HRU87_04105 PF11241 Protein of unknown function (DUF3043) HRU87_04110 PF00248 Aldo/keto reductase family HRU87_04115 PF01180 Dihydroorotate dehydrogenase HRU87_04120 PF03477 ATP cone domain HRU87_04125 PF00815 Histidinol dehydrogenase HRU87_04135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HRU87_04135 PF07733 Bacterial DNA polymerase III alpha NTPase domain HRU87_04135 PF14579 Helix-hairpin-helix motif HRU87_04135 PF02811 PHP domain HRU87_04140 PF00849 RNA pseudouridylate synthase HRU87_04145 PF01252 Signal peptidase (SPase) II HRU87_04150 PF05103 DivIVA protein HRU87_04160 PF04472 Cell division protein SepF HRU87_04165 PF01168 Alanine racemase, N-terminal domain HRU87_04170 PF12327 FtsZ family, C-terminal domain HRU87_04170 PF00091 Tubulin/FtsZ family, GTPase domain HRU87_04180 PF08245 Mur ligase middle domain HRU87_04180 PF02875 Mur ligase family, glutamate ligase domain HRU87_04180 PF01225 Mur ligase family, catalytic domain HRU87_04185 PF04101 Glycosyltransferase family 28 C-terminal domain HRU87_04185 PF03033 Glycosyltransferase family 28 N-terminal domain HRU87_04190 PF01098 Cell cycle protein HRU87_04195 PF02875 Mur ligase family, glutamate ligase domain HRU87_04195 PF08245 Mur ligase middle domain HRU87_04200 PF00953 Glycosyl transferase family 4 HRU87_04205 PF08245 Mur ligase middle domain HRU87_04205 PF02875 Mur ligase family, glutamate ligase domain HRU87_04205 PF01225 Mur ligase family, catalytic domain HRU87_04210 PF02875 Mur ligase family, glutamate ligase domain HRU87_04210 PF08245 Mur ligase middle domain HRU87_04210 PF01225 Mur ligase family, catalytic domain HRU87_04215 PF03717 Penicillin-binding Protein dimerisation domain HRU87_04215 PF00905 Penicillin binding protein transpeptidase domain HRU87_04225 PF01795 MraW methylase family HRU87_04230 PF02381 MraZ protein, putative antitoxin-like HRU87_04240 PF00348 Polyprenyl synthetase HRU87_04250 PF01474 Class-II DAHP synthetase family HRU87_04260 PF00480 ROK family HRU87_04265 PF00501 AMP-binding enzyme HRU87_04270 PF01327 Polypeptide deformylase HRU87_04275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HRU87_04280 PF02436 Conserved carboxylase domain HRU87_04280 PF00682 HMGL-like HRU87_04280 PF02785 Biotin carboxylase C-terminal domain HRU87_04280 PF00289 Biotin carboxylase, N-terminal domain HRU87_04280 PF00364 Biotin-requiring enzyme HRU87_04280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HRU87_04285 PF13614 AAA domain HRU87_04290 PF13411 MerR HTH family regulatory protein HRU87_04295 PF00376 MerR family regulatory protein HRU87_04300 PF16697 Inner membrane component of T3SS, cytoplasmic domain HRU87_04305 PF01066 CDP-alcohol phosphatidyltransferase HRU87_04310 PF02219 Methylenetetrahydrofolate reductase HRU87_04320 PF00056 lactate/malate dehydrogenase, NAD binding domain HRU87_04320 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HRU87_04325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HRU87_04325 PF01926 50S ribosome-binding GTPase HRU87_04330 PF02224 Cytidylate kinase HRU87_04335 PF02153 Prephenate dehydrogenase HRU87_04345 PF01479 S4 domain HRU87_04345 PF00849 RNA pseudouridylate synthase HRU87_04350 PF04079 Segregation and condensation complex subunit ScpB HRU87_04355 PF02616 Segregation and condensation protein ScpA HRU87_04360 PF13614 AAA domain HRU87_04365 PF00589 Phage integrase family HRU87_04365 PF02899 Phage integrase, N-terminal SAM-like domain HRU87_04370 PF00117 Glutamine amidotransferase class-I HRU87_04370 PF06418 CTP synthase N-terminus HRU87_04375 PF02463 RecF/RecN/SMC N terminal domain HRU87_04380 PF01513 ATP-NAD kinase HRU87_04385 PF01728 FtsJ-like methyltransferase HRU87_04385 PF01479 S4 domain HRU87_04390 PF13344 Haloacid dehalogenase-like hydrolase HRU87_04410 PF00579 tRNA synthetases class I (W and Y) HRU87_04415 PF14698 Argininosuccinate lyase C-terminal HRU87_04415 PF00206 Lyase HRU87_04420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HRU87_04420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HRU87_04425 PF00696 Amino acid kinase family HRU87_04430 PF01960 ArgJ family HRU87_04435 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRU87_04435 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRU87_04440 PF01588 Putative tRNA binding domain HRU87_04440 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HRU87_04440 PF03483 B3/4 domain HRU87_04440 PF03484 tRNA synthetase B5 domain HRU87_04440 PF03147 Ferredoxin-fold anticodon binding domain HRU87_04445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HRU87_04445 PF01409 tRNA synthetases class II core domain (F) HRU87_04450 PF00588 SpoU rRNA Methylase family HRU87_04450 PF08032 RNA 2'-O ribose methyltransferase substrate binding HRU87_04455 PF00453 Ribosomal protein L20 HRU87_04460 PF01632 Ribosomal protein L35 HRU87_04465 PF05198 Translation initiation factor IF-3, N-terminal domain HRU87_04465 PF00707 Translation initiation factor IF-3, C-terminal domain HRU87_04480 PF00977 Histidine biosynthesis protein HRU87_04485 PF00117 Glutamine amidotransferase class-I HRU87_04490 PF00475 Imidazoleglycerol-phosphate dehydratase HRU87_04495 PF00155 Aminotransferase class I and II HRU87_04505 PF00717 Peptidase S24-like HRU87_04505 PF01726 LexA DNA binding domain HRU87_04510 PF13167 GTP-binding GTPase N-terminal HRU87_04510 PF01926 50S ribosome-binding GTPase HRU87_04510 PF16360 GTP-binding GTPase Middle Region HRU87_04515 PF05175 Methyltransferase small domain HRU87_04520 PF01678 Diaminopimelate epimerase HRU87_04530 PF00919 Uncharacterized protein family UPF0004 HRU87_04530 PF04055 Radical SAM superfamily HRU87_04535 PF02631 RecX family HRU87_04540 PF00154 recA bacterial DNA recombination protein HRU87_04555 PF02464 Competence-damaged protein HRU87_04555 PF00994 Probable molybdopterin binding domain HRU87_04555 PF18146 Damage-inducible protein CinA KH domain HRU87_04560 PF01066 CDP-alcohol phosphatidyltransferase HRU87_04565 PF17854 FtsK alpha domain HRU87_04565 PF01580 FtsK/SpoIIIE family HRU87_04565 PF09397 Ftsk gamma domain HRU87_04570 PF12706 Beta-lactamase superfamily domain HRU87_04570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HRU87_04570 PF17770 Ribonuclease J C-terminal domain HRU87_04575 PF00701 Dihydrodipicolinate synthetase family HRU87_04580 PF01740 STAS domain HRU87_04580 PF00916 Sulfate permease family HRU87_04585 PF02511 Thymidylate synthase complementing protein HRU87_04605 PF05173 Dihydrodipicolinate reductase, C-terminus HRU87_04605 PF01113 Dihydrodipicolinate reductase, N-terminus HRU87_04610 PF00675 Insulinase (Peptidase family M16) HRU87_04610 PF05193 Peptidase M16 inactive domain HRU87_04615 PF00575 S1 RNA binding domain HRU87_04615 PF01138 3' exoribonuclease family, domain 1 HRU87_04615 PF00013 KH domain HRU87_04615 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HRU87_04620 PF00312 Ribosomal protein S15 HRU87_04625 PF05656 Protein of unknown function (DUF805) HRU87_04630 PF06574 FAD synthetase HRU87_04630 PF01687 Riboflavin kinase HRU87_04650 PF00005 ABC transporter HRU87_04655 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_04660 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_04670 PF09142 tRNA Pseudouridine synthase II, C terminal HRU87_04670 PF16198 tRNA pseudouridylate synthase B C-terminal domain HRU87_04670 PF01509 TruB family pseudouridylate synthase (N terminal domain) HRU87_04675 PF02033 Ribosome-binding factor A HRU87_04680 PF04760 Translation initiation factor IF-2, N-terminal region HRU87_04680 PF11987 Translation-initiation factor 2 HRU87_04680 PF00009 Elongation factor Tu GTP binding domain HRU87_04690 PF13184 NusA-like KH domain HRU87_04690 PF08529 NusA N-terminal domain HRU87_04695 PF04073 Aminoacyl-tRNA editing domain HRU87_04695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRU87_04695 PF03129 Anticodon binding domain HRU87_04700 PF04551 GcpE protein HRU87_04705 PF02163 Peptidase family M50 HRU87_04705 PF17820 PDZ domain HRU87_04710 PF13288 DXP reductoisomerase C-terminal domain HRU87_04710 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HRU87_04710 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HRU87_04715 PF00202 Aminotransferase class-III HRU87_04720 PF00202 Aminotransferase class-III HRU87_04725 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_04730 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_04735 PF00005 ABC transporter HRU87_04735 PF08402 TOBE domain HRU87_04740 PF13416 Bacterial extracellular solute-binding protein HRU87_04745 PF00171 Aldehyde dehydrogenase family HRU87_04750 PF01037 Lrp/AsnC ligand binding domain HRU87_04755 PF00202 Aminotransferase class-III HRU87_04760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HRU87_04760 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HRU87_04765 PF03352 Methyladenine glycosylase HRU87_04780 PF03883 Peroxide stress protein YaaA HRU87_04785 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HRU87_04790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRU87_04790 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRU87_04795 PF00231 ATP synthase HRU87_04800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRU87_04800 PF00306 ATP synthase alpha/beta chain, C terminal domain HRU87_04800 PF02874 ATP synthase alpha/beta family, beta-barrel domain HRU87_04805 PF00213 ATP synthase delta (OSCP) subunit HRU87_04810 PF00430 ATP synthase B/B' CF(0) HRU87_04815 PF00137 ATP synthase subunit C HRU87_04820 PF00119 ATP synthase A chain HRU87_04830 PF00953 Glycosyl transferase family 4 HRU87_04835 PF01300 Telomere recombination HRU87_04840 PF17827 PrmC N-terminal domain HRU87_04840 PF13649 Methyltransferase domain HRU87_04845 PF03462 PCRF domain HRU87_04845 PF00472 RF-1 domain HRU87_04850 PF07497 Rho termination factor, RNA-binding domain HRU87_04850 PF07498 Rho termination factor, N-terminal domain HRU87_04850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HRU87_04855 PF00288 GHMP kinases N terminal domain HRU87_04860 PF00291 Pyridoxal-phosphate dependent enzyme HRU87_04865 PF01842 ACT domain HRU87_04865 PF03447 Homoserine dehydrogenase, NAD binding domain HRU87_04865 PF00742 Homoserine dehydrogenase HRU87_04870 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HRU87_04870 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HRU87_04875 PF05746 DALR anticodon binding domain HRU87_04875 PF00750 tRNA synthetases class I (R) HRU87_04875 PF03485 Arginyl tRNA synthetase N terminal domain HRU87_04880 PF00128 Alpha amylase, catalytic domain HRU87_04890 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_04895 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_04900 PF01547 Bacterial extracellular solute-binding protein HRU87_04905 PF01725 Ham1 family HRU87_04910 PF01138 3' exoribonuclease family, domain 1 HRU87_04910 PF03725 3' exoribonuclease family, domain 2 HRU87_04915 PF01177 Asp/Glu/Hydantoin racemase HRU87_04920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HRU87_04920 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HRU87_04930 PF13180 PDZ domain HRU87_04950 PF03699 Uncharacterised protein family (UPF0182) HRU87_04970 PF13361 UvrD-like helicase C-terminal domain HRU87_04970 PF00570 HRDC domain HRU87_04970 PF00580 UvrD/REP helicase N-terminal domain HRU87_04980 PF00580 UvrD/REP helicase N-terminal domain HRU87_04980 PF13361 UvrD-like helicase C-terminal domain HRU87_04985 PF12705 PD-(D/E)XK nuclease superfamily HRU87_05005 PF00271 Helicase conserved C-terminal domain HRU87_05005 PF00270 DEAD/DEAH box helicase HRU87_05010 PF02811 PHP domain HRU87_05015 PF05195 Aminopeptidase P, N-terminal domain HRU87_05015 PF00557 Metallopeptidase family M24 HRU87_05025 PF00571 CBS domain HRU87_05025 PF03448 MgtE intracellular N domain HRU87_05025 PF01769 Divalent cation transporter HRU87_05035 PF01883 Iron-sulfur cluster assembly protein HRU87_05035 PF10609 NUBPL iron-transfer P-loop NTPase HRU87_05040 PF00171 Aldehyde dehydrogenase family HRU87_05045 PF02416 mttA/Hcf106 family HRU87_05050 PF01596 O-methyltransferase HRU87_05060 PF07687 Peptidase dimerisation domain HRU87_05060 PF01546 Peptidase family M20/M25/M40 HRU87_05065 PF14602 Hexapeptide repeat of succinyl-transferase HRU87_05065 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HRU87_05070 PF00586 AIR synthase related protein, N-terminal domain HRU87_05070 PF02769 AIR synthase related protein, C-terminal domain HRU87_05080 PF07478 D-ala D-ala ligase C-terminus HRU87_05080 PF01820 D-ala D-ala ligase N-terminus HRU87_05085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HRU87_05085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HRU87_05095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HRU87_05100 PF00694 Aconitase C-terminal domain HRU87_05105 PF00330 Aconitase family (aconitate hydratase) HRU87_05110 PF07690 Major Facilitator Superfamily HRU87_05110 PF00083 Sugar (and other) transporter HRU87_05120 PF00781 Diacylglycerol kinase catalytic domain HRU87_05140 PF00749 tRNA synthetases class I (E and Q), catalytic domain HRU87_05145 PF01557 Fumarylacetoacetate (FAA) hydrolase family HRU87_05150 PF01063 Amino-transferase class IV HRU87_05155 PF00180 Isocitrate/isopropylmalate dehydrogenase HRU87_05170 PF02583 Metal-sensitive transcriptional repressor HRU87_05175 PF00581 Rhodanese-like domain HRU87_05185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HRU87_05185 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_05190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HRU87_05190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRU87_05190 PF01842 ACT domain HRU87_05200 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HRU87_05200 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HRU87_05205 PF01842 ACT domain HRU87_05205 PF10369 Small subunit of acetolactate synthase HRU87_05210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRU87_05210 PF00205 Thiamine pyrophosphate enzyme, central domain HRU87_05210 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRU87_05215 PF00920 Dehydratase family HRU87_05225 PF01593 Flavin containing amine oxidoreductase HRU87_05235 PF01040 UbiA prenyltransferase family HRU87_05240 PF01040 UbiA prenyltransferase family HRU87_05250 PF01053 Cys/Met metabolism PLP-dependent enzyme HRU87_05255 PF00155 Aminotransferase class I and II HRU87_05260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HRU87_05265 PF01810 LysE type translocator HRU87_05285 PF00578 AhpC/TSA family HRU87_05290 PF01810 LysE type translocator HRU87_05295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HRU87_05340 PF00578 AhpC/TSA family HRU87_05350 PF02467 Transcription factor WhiB HRU87_05360 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HRU87_05360 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HRU87_05365 PF10509 Galactokinase galactose-binding signature HRU87_05365 PF00288 GHMP kinases N terminal domain HRU87_05365 PF08544 GHMP kinases C terminal HRU87_05370 PF00857 Isochorismatase family HRU87_05395 PF02080 TrkA-C domain HRU87_05395 PF02254 TrkA-N domain HRU87_05400 PF02386 Cation transport protein HRU87_05435 PF00128 Alpha amylase, catalytic domain HRU87_05435 PF09244 Domain of unknown function (DUF1964) HRU87_05445 PF00072 Response regulator receiver domain HRU87_05445 PF00196 Bacterial regulatory proteins, luxR family HRU87_05450 PF03313 Serine dehydratase alpha chain HRU87_05450 PF03315 Serine dehydratase beta chain HRU87_05455 PF13520 Amino acid permease HRU87_05460 PF00120 Glutamine synthetase, catalytic domain HRU87_05465 PF07722 Peptidase C26 HRU87_05470 PF00171 Aldehyde dehydrogenase family HRU87_05480 PF07729 FCD domain HRU87_05480 PF00392 Bacterial regulatory proteins, gntR family HRU87_05485 PF00958 GMP synthase C terminal domain HRU87_05485 PF00117 Glutamine amidotransferase class-I HRU87_05485 PF02540 NAD synthase HRU87_05510 PF00474 Sodium:solute symporter family HRU87_05520 PF00561 alpha/beta hydrolase fold HRU87_05520 PF08386 TAP-like protein HRU87_05525 PF12169 DNA polymerase III subunits gamma and tau domain III HRU87_05530 PF02223 Thymidylate kinase HRU87_05535 PF13368 Topoisomerase C-terminal repeat HRU87_05535 PF01751 Toprim domain HRU87_05535 PF01131 DNA topoisomerase HRU87_05560 PF00437 Type II/IV secretion system protein HRU87_05565 PF13193 AMP-binding enzyme C-terminal domain HRU87_05565 PF16177 Acetyl-coenzyme A synthetase N-terminus HRU87_05565 PF00501 AMP-binding enzyme HRU87_05570 PF01042 Endoribonuclease L-PSP HRU87_05580 PF00905 Penicillin binding protein transpeptidase domain HRU87_05580 PF17092 Penicillin-binding protein OB-like domain HRU87_05580 PF00912 Transglycosylase HRU87_05590 PF01118 Semialdehyde dehydrogenase, NAD binding domain HRU87_05590 PF02774 Semialdehyde dehydrogenase, dimerisation domain HRU87_05595 PF00696 Amino acid kinase family HRU87_05595 PF01842 ACT domain HRU87_05595 PF13840 ACT domain HRU87_05600 PF13662 Toprim domain HRU87_05600 PF02132 RecR protein HRU87_05605 PF12169 DNA polymerase III subunits gamma and tau domain III HRU87_05625 PF00171 Aldehyde dehydrogenase family HRU87_05675 PF00196 Bacterial regulatory proteins, luxR family HRU87_05675 PF00072 Response regulator receiver domain HRU87_05680 PF07730 Histidine kinase HRU87_05685 PF03176 MMPL family HRU87_05725 PF01212 Beta-eliminating lyase HRU87_05740 PF03176 MMPL family HRU87_05750 PF00356 Bacterial regulatory proteins, lacI family HRU87_05755 PF00258 Flavodoxin HRU87_05760 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_05765 PF00067 Cytochrome P450 HRU87_05775 PF00248 Aldo/keto reductase family HRU87_05780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRU87_05780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRU87_05785 PF00005 ABC transporter HRU87_05790 PF02653 Branched-chain amino acid transport system / permease component HRU87_05800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRU87_05800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HRU87_05805 PF01261 Xylose isomerase-like TIM barrel HRU87_05810 PF01261 Xylose isomerase-like TIM barrel HRU87_05815 PF00294 pfkB family carbohydrate kinase HRU87_05825 PF00171 Aldehyde dehydrogenase family HRU87_05830 PF04962 KduI/IolB family HRU87_05835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HRU87_05835 PF00205 Thiamine pyrophosphate enzyme, central domain HRU87_05835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRU87_05840 PF01261 Xylose isomerase-like TIM barrel HRU87_05845 PF14552 Tautomerase enzyme HRU87_05850 PF07702 UTRA domain HRU87_05850 PF00392 Bacterial regulatory proteins, gntR family HRU87_05855 PF04616 Glycosyl hydrolases family 43 HRU87_05860 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HRU87_05860 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HRU87_05865 PF01261 Xylose isomerase-like TIM barrel HRU87_05870 PF13802 Galactose mutarotase-like HRU87_05870 PF01055 Glycosyl hydrolases family 31 HRU87_05875 PF02653 Branched-chain amino acid transport system / permease component HRU87_05880 PF00005 ABC transporter HRU87_05885 PF13407 Periplasmic binding protein domain HRU87_05890 PF01047 MarR family HRU87_05890 PF00480 ROK family HRU87_05900 PF00232 Glycosyl hydrolase family 1 HRU87_05905 PF00005 ABC transporter HRU87_05905 PF17845 FbpC C-terminal regulatory nucleotide binding domain HRU87_05910 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_05915 PF01547 Bacterial extracellular solute-binding protein HRU87_05920 PF16326 ABC transporter C-terminal domain HRU87_05920 PF12848 ABC transporter HRU87_05920 PF00005 ABC transporter HRU87_05930 PF00270 DEAD/DEAH box helicase HRU87_05930 PF00271 Helicase conserved C-terminal domain HRU87_05930 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HRU87_05930 PF11898 Domain of unknown function (DUF3418) HRU87_05930 PF04408 Helicase associated domain (HA2) HRU87_05935 PF01036 Bacteriorhodopsin-like protein HRU87_05945 PF00202 Aminotransferase class-III HRU87_05955 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HRU87_05960 PF13460 NAD(P)H-binding HRU87_05960 PF11066 Protein of unknown function (DUF2867) HRU87_05965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HRU87_05975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HRU87_05975 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HRU87_05980 PF00892 EamA-like transporter family HRU87_05985 PF00762 Ferrochelatase HRU87_05990 PF06778 Chlorite dismutase HRU87_06000 PF01208 Uroporphyrinogen decarboxylase (URO-D) HRU87_06005 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HRU87_06005 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HRU87_06005 PF01488 Shikimate / quinate 5-dehydrogenase HRU87_06010 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HRU87_06010 PF03900 Porphobilinogen deaminase, C-terminal domain HRU87_06020 PF00490 Delta-aminolevulinic acid dehydratase HRU87_06025 PF00202 Aminotransferase class-III HRU87_06030 PF00440 Bacterial regulatory proteins, tetR family HRU87_06030 PF02909 Tetracyclin repressor-like, C-terminal domain HRU87_06035 PF07690 Major Facilitator Superfamily HRU87_06040 PF04261 Dyp-type peroxidase family HRU87_06055 PF07972 NrdI Flavodoxin like HRU87_06060 PF00317 Ribonucleotide reductase, all-alpha domain HRU87_06060 PF02867 Ribonucleotide reductase, barrel domain HRU87_06060 PF08343 Ribonucleotide reductase N-terminal HRU87_06065 PF00268 Ribonucleotide reductase, small chain HRU87_06070 PF02535 ZIP Zinc transporter HRU87_06080 PF00542 Ribosomal protein L7/L12 C-terminal domain HRU87_06080 PF16320 Ribosomal protein L7/L12 dimerisation domain HRU87_06085 PF00466 Ribosomal protein L10 HRU87_06090 PF00270 DEAD/DEAH box helicase HRU87_06090 PF03880 DbpA RNA binding domain HRU87_06090 PF00271 Helicase conserved C-terminal domain HRU87_06100 PF13419 Haloacid dehalogenase-like hydrolase HRU87_06110 PF00294 pfkB family carbohydrate kinase HRU87_06120 PF00687 Ribosomal protein L1p/L10e family HRU87_06125 PF03946 Ribosomal protein L11, N-terminal domain HRU87_06125 PF00298 Ribosomal protein L11, RNA binding domain HRU87_06130 PF02357 Transcription termination factor nusG HRU87_06135 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HRU87_06145 PF00155 Aminotransferase class I and II HRU87_06160 PF01565 FAD binding domain HRU87_06160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HRU87_06170 PF13452 N-terminal half of MaoC dehydratase HRU87_06190 PF00128 Alpha amylase, catalytic domain HRU87_06190 PF02903 Alpha amylase, N-terminal ig-like domain HRU87_06200 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_06205 PF14785 Maltose transport system permease protein MalF P2 domain HRU87_06205 PF00528 Binding-protein-dependent transport system inner membrane component HRU87_06215 PF00128 Alpha amylase, catalytic domain HRU87_06220 PF00128 Alpha amylase, catalytic domain HRU87_06225 PF03176 MMPL family HRU87_06230 PF07690 Major Facilitator Superfamily HRU87_06265 PF00356 Bacterial regulatory proteins, lacI family HRU87_06270 PF04461 Protein of unknown function (DUF520) HRU87_06275 PF01238 Phosphomannose isomerase type I HRU87_06285 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_06290 PF00348 Polyprenyl synthetase HRU87_06295 PF01209 ubiE/COQ5 methyltransferase family HRU87_06305 PF00425 chorismate binding enzyme HRU87_06310 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HRU87_06325 PF01040 UbiA prenyltransferase family HRU87_06330 PF00501 AMP-binding enzyme HRU87_06330 PF13193 AMP-binding enzyme C-terminal domain HRU87_06335 PF00378 Enoyl-CoA hydratase/isomerase HRU87_06340 PF13378 Enolase C-terminal domain-like HRU87_06340 PF18374 Enolase N-terminal domain-like HRU87_06345 PF01578 Cytochrome C assembly protein HRU87_06355 PF02683 Cytochrome C biogenesis protein transmembrane region HRU87_06360 PF00085 Thioredoxin HRU87_06365 PF00300 Histidine phosphatase superfamily (branch 1) HRU87_06370 PF00152 tRNA synthetases class II (D, K and N) HRU87_06370 PF01336 OB-fold nucleic acid binding domain HRU87_06375 PF01850 PIN domain HRU87_06390 PF01381 Helix-turn-helix HRU87_06415 PF03807 NADP oxidoreductase coenzyme F420-dependent HRU87_06415 PF14748 Pyrroline-5-carboxylate reductase dimerisation HRU87_06425 PF18073 Rubredoxin metal binding domain HRU87_06435 PF00583 Acetyltransferase (GNAT) family HRU87_06445 PF17871 AAA lid domain HRU87_06445 PF02861 Clp amino terminal domain, pathogenicity island component HRU87_06445 PF00004 ATPase family associated with various cellular activities (AAA) HRU87_06445 PF07724 AAA domain (Cdc48 subfamily) HRU87_06445 PF10431 C-terminal, D2-small domain, of ClpB protein HRU87_06455 PF01336 OB-fold nucleic acid binding domain HRU87_06455 PF00152 tRNA synthetases class II (D, K and N) HRU87_06460 PF02569 Pantoate-beta-alanine ligase HRU87_06475 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HRU87_06480 PF02152 Dihydroneopterin aldolase HRU87_06485 PF00809 Pterin binding enzyme HRU87_06490 PF01227 GTP cyclohydrolase I HRU87_06495 PF17862 AAA+ lid domain HRU87_06495 PF01434 Peptidase family M41 HRU87_06495 PF00004 ATPase family associated with various cellular activities (AAA) HRU87_06500 PF00156 Phosphoribosyl transferase domain HRU87_06505 PF01171 PP-loop family HRU87_06505 PF09179 TilS substrate binding domain HRU87_06510 PF00719 Inorganic pyrophosphatase HRU87_06545 PF07690 Major Facilitator Superfamily HRU87_06555 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRU87_06560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HRU87_06575 PF02769 AIR synthase related protein, C-terminal domain HRU87_06575 PF00586 AIR synthase related protein, N-terminal domain HRU87_06580 PF00156 Phosphoribosyl transferase domain HRU87_06605 PF01040 UbiA prenyltransferase family HRU87_06610 PF01593 Flavin containing amine oxidoreductase HRU87_06615 PF00881 Nitroreductase family HRU87_06650 PF01545 Cation efflux family HRU87_06670 PF03972 MmgE/PrpD family HRU87_06675 PF07690 Major Facilitator Superfamily HRU87_06680 PF01970 Tripartite tricarboxylate transporter TctA family HRU87_06690 PF03401 Tripartite tricarboxylate transporter family receptor HRU87_06700 PF13399 LytR cell envelope-related transcriptional attenuator HRU87_06700 PF03816 Cell envelope-related transcriptional attenuator domain HRU87_06715 PF02403 Seryl-tRNA synthetase N-terminal domain HRU87_06715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HRU87_06720 PF00781 Diacylglycerol kinase catalytic domain HRU87_06725 PF01842 ACT domain HRU87_06725 PF00800 Prephenate dehydratase HRU87_06730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HRU87_06730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HRU87_06730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HRU87_06730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HRU87_06735 PF02557 D-alanyl-D-alanine carboxypeptidase HRU87_06740 PF07690 Major Facilitator Superfamily HRU87_06755 PF01555 DNA methylase HRU87_06770 PF01431 Peptidase family M13 HRU87_06770 PF05649 Peptidase family M13 HRU87_06775 PF00581 Rhodanese-like domain HRU87_06775 PF12368 Rhodanase C-terminal HRU87_06775 PF17773 UPF0176 acylphosphatase like domain HRU87_06785 PF03458 UPF0126 domain HRU87_06800 PF16697 Inner membrane component of T3SS, cytoplasmic domain HRU87_06810 PF01098 Cell cycle protein HRU87_06815 PF00905 Penicillin binding protein transpeptidase domain HRU87_06820 PF00069 Protein kinase domain HRU87_06825 PF03793 PASTA domain HRU87_06825 PF00069 Protein kinase domain HRU87_06830 PF00117 Glutamine amidotransferase class-I HRU87_06835 PF06781 Cell division protein CrgA HRU87_06840 PF01694 Rhomboid family HRU87_06845 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HRU87_06860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HRU87_06860 PF02378 Phosphotransferase system, EIIC HRU87_06860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HRU87_06870 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HRU87_06875 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HRU87_06890 PF03176 MMPL family HRU87_06900 PF14493 Helix-turn-helix domain HRU87_06900 PF05970 PIF1-like helicase HRU87_06915 PF00216 Bacterial DNA-binding protein HRU87_06920 PF03741 Integral membrane protein TerC family HRU87_06930 PF00253 Ribosomal protein S14p/S29e HRU87_06935 PF00471 Ribosomal protein L33 HRU87_06940 PF00830 Ribosomal L28 family HRU87_06945 PF01475 Ferric uptake regulator family HRU87_06950 PF00950 ABC 3 transport family HRU87_06955 PF00005 ABC transporter HRU87_06965 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HRU87_06965 PF00364 Biotin-requiring enzyme HRU87_06965 PF02817 e3 binding domain HRU87_06970 PF02779 Transketolase, pyrimidine binding domain HRU87_06970 PF02780 Transketolase, C-terminal domain HRU87_06975 PF00676 Dehydrogenase E1 component HRU87_06985 PF08328 Adenylosuccinate lyase C-terminal HRU87_06985 PF00206 Lyase HRU87_07000 PF00772 DnaB-like helicase N terminal domain HRU87_07000 PF03796 DnaB-like helicase C terminal domain HRU87_07005 PF03948 Ribosomal protein L9, C-terminal domain HRU87_07005 PF01281 Ribosomal protein L9, N-terminal domain HRU87_07010 PF01084 Ribosomal protein S18 HRU87_07015 PF00436 Single-strand binding protein family HRU87_07020 PF01250 Ribosomal protein S6 HRU87_07025 PF01743 Poly A polymerase head domain HRU87_07025 PF12627 Probable RNA and SrmB- binding site of polymerase A HRU87_07025 PF13735 tRNA nucleotidyltransferase domain 2 putative HRU87_07030 PF00293 NUDIX domain HRU87_07040 PF03023 Lipid II flippase MurJ HRU87_07045 PF07992 Pyridine nucleotide-disulphide oxidoreductase HRU87_07050 PF00085 Thioredoxin HRU87_07055 PF00155 Aminotransferase class I and II HRU87_07060 PF07478 D-ala D-ala ligase C-terminus HRU87_07060 PF01820 D-ala D-ala ligase N-terminus HRU87_07065 PF17762 HTH domain found in ParB protein HRU87_07065 PF02195 ParB-like nuclease domain HRU87_07070 PF13614 AAA domain HRU87_07080 PF02527 rRNA small subunit methyltransferase G HRU87_07090 PF02096 60Kd inner membrane protein HRU87_07095 PF01809 Putative membrane protein insertion efficiency factor HRU87_07100 PF00825 Ribonuclease P HRU87_07105 PF00468 Ribosomal protein L34