locus-tag	class	description
G9X63_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
G9X63_00010	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
G9X63_00020	COG0415	Belongs to the DNA photolyase family
G9X63_00025	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
G9X63_00030	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
G9X63_00045	COG1012	belongs to the aldehyde dehydrogenase family
G9X63_00050	COG0488	(ABC) transporter
G9X63_00060	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
G9X63_00070	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
G9X63_00075	COG0758	DNA mediated transformation
G9X63_00085	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
G9X63_00090	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
G9X63_00095	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
G9X63_00105	COG0686	Belongs to the AlaDH PNT family
G9X63_00120	COG0006	proline dipeptidase activity
G9X63_00135	COG3254	rhamnose metabolic process
G9X63_00155	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
G9X63_00165	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
G9X63_00175	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
G9X63_00180	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
G9X63_00190	COG3525	Glycosyl hydrolase, family 20, catalytic domain
G9X63_00195	COG0004	ammonium transporteR
G9X63_00220	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
G9X63_00250	COG1663	tetraacyldisaccharide 4'-kinase activity
G9X63_00265	COG0408	coproporphyrinogen oxidase activity
G9X63_00280	COG0482	sulfurtransferase activity
G9X63_00295	COG2205	protein histidine kinase activity
G9X63_00295	COG0745	RESPONSE REGULATOR receiver
G9X63_00295	COG3292	Two component regulator propeller
G9X63_00300	COG2186	Transcriptional regulator
G9X63_00305	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
G9X63_00310	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
G9X63_00315	COG0484	heat shock protein binding
G9X63_00325	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
G9X63_00335	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
G9X63_00340	COG0101	tRNA pseudouridine synthase activity
G9X63_00345	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
G9X63_00375	COG1301	dicarboxylic acid transport
G9X63_00380	COG4591	ABC-type transport system involved in lipoprotein release permease component
G9X63_00385	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
G9X63_00395	COG0698	ribose 5-phosphate isomerase
G9X63_00400	COG1611	Belongs to the LOG family
G9X63_00405	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
G9X63_00405	COG1796	DNA polymerase
G9X63_00410	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
G9X63_00415	COG2308	Evidence 4 Homologs of previously reported genes of
G9X63_00435	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
G9X63_00440	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
G9X63_00445	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
G9X63_00460	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
G9X63_00475	COG0602	queuosine metabolic process
G9X63_00480	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
G9X63_00480	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
G9X63_00495	COG0519	Catalyzes the synthesis of GMP from XMP
G9X63_00495	COG0518	GMP synthase (glutamine-hydrolyzing) activity
G9X63_00500	COG3876	Protein conserved in bacteria
G9X63_00515	COG0280	phosphate acetyltransferase
G9X63_00515	COG0281	malic enzyme
G9X63_00520	COG1301	dicarboxylic acid transport
G9X63_00525	COG0492	ferredoxin-NADP+ reductase activity
G9X63_00530	COG0741	lytic transglycosylase activity
G9X63_00530	COG1196	nuclear chromosome segregation
G9X63_00530	COG0739	heme binding
G9X63_00545	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
G9X63_00545	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
G9X63_00555	COG0423	glycine-tRNA ligase activity
G9X63_00570	COG1733	regulation of RNA biosynthetic process
G9X63_00585	COG1250	3-hydroxyacyl-CoA dehydrogenase
G9X63_00595	COG3550	peptidyl-serine autophosphorylation
G9X63_00605	COG0859	PFAM glycosyl transferase family 9
G9X63_00635	COG0673	inositol 2-dehydrogenase activity
G9X63_00650	COG0730	response to heat
G9X63_00655	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
G9X63_00655	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
G9X63_00660	COG1054	Belongs to the UPF0176 family
G9X63_00690	COG3258	Cytochrome c
G9X63_00745	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
G9X63_00750	COG0587	DNA-directed DNA polymerase activity
G9X63_00755	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
G9X63_00765	COG2183	response to ionizing radiation
G9X63_00805	COG1162	GTPase activity
G9X63_00825	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
G9X63_00835	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
G9X63_00850	COG0126	phosphoglycerate kinase activity
G9X63_00855	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
G9X63_00860	COG0640	Transcriptional regulator
G9X63_00880	COG1668	transmembrane transport
G9X63_00885	COG4152	abc transporter atp-binding protein
G9X63_00900	COG1621	beta-fructofuranosidase activity
G9X63_00910	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
G9X63_00915	COG0799	negative regulation of ribosome biogenesis
G9X63_00925	COG0318	PFAM AMP-dependent synthetase and ligase
G9X63_00945	COG2096	Adenosyltransferase
G9X63_00955	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
G9X63_00960	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
G9X63_01000	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
G9X63_01005	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
G9X63_01015	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
G9X63_01020	COG0222	ribosome binding
G9X63_01025	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
G9X63_01030	COG0081	regulation of translation
G9X63_01035	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
G9X63_01105	COG2322	membrane
G9X63_01125	COG1845	cytochrome c oxidase, subunit III
G9X63_01130	COG0109	protoheme IX farnesyltransferase activity
G9X63_01140	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
G9X63_01145	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
G9X63_01170	COG0437	4 iron, 4 sulfur cluster binding
G9X63_01190	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
G9X63_01215	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
G9X63_01220	COG5002	protein histidine kinase activity
G9X63_01225	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
G9X63_01230	COG0346	lactoylglutathione lyase activity
G9X63_01235	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
G9X63_01240	COG0512	Glutamine amidotransferase of anthranilate synthase
G9X63_01245	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
G9X63_01250	COG0134	indole-3-glycerol-phosphate synthase activity
G9X63_01255	COG0135	phosphoribosylanthranilate isomerase activity
G9X63_01260	COG0133	tryptophan synthase activity
G9X63_01265	COG0159	tryptophan synthase activity
G9X63_01270	COG0335	large ribosomal subunit rRNA binding
G9X63_01280	COG0673	inositol 2-dehydrogenase activity
G9X63_01285	COG1136	(ABC) transporter
G9X63_01290	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
G9X63_01300	COG1262	PFAM Formylglycine-generating sulfatase enzyme
G9X63_01305	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
G9X63_01315	COG0463	Glycosyl transferase, family 2
G9X63_01320	COG0861	Integral membrane protein TerC family
G9X63_01340	COG3507	Belongs to the glycosyl hydrolase 43 family
G9X63_01360	COG0488	(ABC) transporter
G9X63_01365	COG0805	protein transport
G9X63_01370	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
G9X63_01400	COG1649	PFAM Uncharacterised BCR, COG1649
G9X63_01405	COG0745	RESPONSE REGULATOR receiver
G9X63_01410	COG0628	permease
G9X63_01420	COG3275	phosphorelay sensor kinase activity
G9X63_01425	COG0406	alpha-ribazole phosphatase activity
G9X63_01430	COG2050	protein possibly involved in aromatic compounds catabolism
G9X63_01440	COG1253	flavin adenine dinucleotide binding
G9X63_01450	COG1138	Cytochrome C-type biogenesis protein
G9X63_01495	COG1809	phosphosulfolactate synthase activity
G9X63_01500	COG0586	Pfam SNARE associated Golgi protein
G9X63_01505	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
G9X63_01510	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
G9X63_01520	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
G9X63_01545	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
G9X63_01550	COG0590	tRNA wobble adenosine to inosine editing
G9X63_01555	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
G9X63_01580	COG0662	Cupin 2, conserved barrel domain protein
G9X63_01580	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
G9X63_01595	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
G9X63_01615	COG0247	lactate metabolic process
G9X63_01615	COG2181	nitrate reductase activity
G9X63_01625	COG1956	GAF domain-containing protein
G9X63_01630	COG0688	phosphatidylethanolamine metabolic process
G9X63_01655	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
G9X63_01660	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
G9X63_01680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
G9X63_01700	COG0438	transferase activity, transferring glycosyl groups
G9X63_01705	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
G9X63_01710	COG1678	Uncharacterized ACR, COG1678
G9X63_01715	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
G9X63_01720	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_01725	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_01740	COG1216	Glycosyl transferase, family 2
G9X63_01745	COG1132	(ABC) transporter
G9X63_01750	COG0436	Aminotransferase
G9X63_01755	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
G9X63_01765	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
G9X63_01770	COG0275	rRNA processing
G9X63_01780	COG0768	penicillin binding
G9X63_01785	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
G9X63_01790	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
G9X63_01800	COG1228	amidohydrolase
G9X63_01810	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
G9X63_01815	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
G9X63_01830	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
G9X63_01835	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
G9X63_01840	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
G9X63_01850	COG0360	Binds together with S18 to 16S ribosomal RNA
G9X63_01855	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
G9X63_01860	COG0359	binds to the 23S rRNA
G9X63_01865	COG0538	isocitrate dehydrogenase activity
G9X63_01870	COG0788	formyltetrahydrofolate deformylase activity
G9X63_01875	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
G9X63_01885	COG0242	peptide deformylase activity
G9X63_01890	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
G9X63_01895	COG0616	signal peptide processing
G9X63_01900	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
G9X63_01910	COG1418	mRNA catabolic process
G9X63_01930	COG3279	Response regulator of the LytR AlgR family
G9X63_01935	COG2972	Histidine kinase
G9X63_01935	COG0745	RESPONSE REGULATOR receiver
G9X63_01955	COG0022	dehydrogenase e1 component
G9X63_01970	COG0713	ATP synthesis coupled electron transport
G9X63_01975	COG0322	excinuclease ABC activity
G9X63_01980	COG4771	TonB-dependent receptor
G9X63_01985	COG0702	epimerase
G9X63_02000	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
G9X63_02020	COG0772	Belongs to the SEDS family
G9X63_02025	COG0477	Major facilitator Superfamily
G9X63_02035	COG2363	Small membrane protein
G9X63_02040	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
G9X63_02045	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
G9X63_02050	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
G9X63_02055	COG0356	it plays a direct role in the translocation of protons across the membrane
G9X63_02065	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
G9X63_02070	COG0300	oxidoreductase activity
G9X63_02075	COG2211	Major facilitator Superfamily
G9X63_02095	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
G9X63_02100	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
G9X63_02105	COG4771	TonB-dependent receptor
G9X63_02140	COG1960	acyl-CoA dehydrogenase activity
G9X63_02150	COG0287	Prephenate dehydrogenase
G9X63_02165	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
G9X63_02170	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_02175	COG0429	hydrolase of the alpha beta-hydrolase fold
G9X63_02180	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
G9X63_02185	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
G9X63_02190	COG0673	inositol 2-dehydrogenase activity
G9X63_02205	COG0217	transcriptional regulatory protein
G9X63_02230	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
G9X63_02240	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
G9X63_02250	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
G9X63_02255	COG2816	NAD+ diphosphatase activity
G9X63_02260	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
G9X63_02280	COG0227	Belongs to the bacterial ribosomal protein bL28 family
G9X63_02285	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
G9X63_02290	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
G9X63_02300	COG3386	PFAM SMP-30 Gluconolaconase
G9X63_02305	COG2890	protein-(glutamine-N5) methyltransferase activity
G9X63_02340	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
G9X63_02345	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
G9X63_02350	COG0772	Belongs to the SEDS family
G9X63_02355	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
G9X63_02360	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
G9X63_02365	COG0052	Belongs to the universal ribosomal protein uS2 family
G9X63_02370	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
G9X63_02375	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
G9X63_02380	COG0439	Biotin carboxylase
G9X63_02385	COG0511	ligase activity, forming carbon-carbon bonds
G9X63_02390	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
G9X63_02395	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
G9X63_02400	COG0416	fatty acid biosynthetic process
G9X63_02405	COG0333	Belongs to the bacterial ribosomal protein bL32 family
G9X63_02420	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
G9X63_02425	COG0105	UTP biosynthetic process
G9X63_02435	COG0545	Peptidyl-prolyl cis-trans isomerase
G9X63_02445	COG0545	Peptidyl-prolyl cis-trans isomerase
G9X63_02450	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
G9X63_02460	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
G9X63_02470	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
G9X63_02480	COG0456	acetyltransferase
G9X63_02490	COG0218	Necessary for normal cell division and for the maintenance of normal septation
G9X63_02500	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
G9X63_02505	COG0516	GMP reductase activity
G9X63_02505	COG0517	IMP dehydrogenase activity
G9X63_02510	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_02515	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_02525	COG0649	NAD binding
G9X63_02530	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
G9X63_02540	COG1034	ATP synthesis coupled electron transport
G9X63_02545	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
G9X63_02550	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_02555	COG0839	Belongs to the complex I subunit 6 family
G9X63_02565	COG0745	RESPONSE REGULATOR receiver
G9X63_02565	COG2972	Histidine kinase
G9X63_02570	COG3279	Response regulator of the LytR AlgR family
G9X63_02575	COG4772	TonB-dependent receptor
G9X63_02590	COG0438	transferase activity, transferring glycosyl groups
G9X63_02640	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
G9X63_02645	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
G9X63_02655	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
G9X63_02665	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
G9X63_02680	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
G9X63_02685	COG0572	uridine kinase
G9X63_02715	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
G9X63_02720	COG0489	protein tyrosine kinase activity
G9X63_02745	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
G9X63_02760	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
G9X63_02765	COG0531	amino acid
G9X63_02785	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
G9X63_02790	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
G9X63_02805	COG2205	protein histidine kinase activity
G9X63_02805	COG3292	Two component regulator propeller
G9X63_02805	COG0745	RESPONSE REGULATOR receiver
G9X63_02810	COG0477	Major facilitator Superfamily
G9X63_02810	COG2814	Major facilitator Superfamily
G9X63_02815	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
G9X63_02815	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
G9X63_02820	COG4771	TonB-dependent receptor
G9X63_02825	COG0702	epimerase
G9X63_02830	COG1621	beta-fructofuranosidase activity
G9X63_02885	COG4977	sequence-specific DNA binding
G9X63_02905	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
G9X63_02975	COG2133	pyrroloquinoline quinone binding
G9X63_02995	COG2272	Belongs to the type-B carboxylesterase lipase family
G9X63_03015	COG2081	HI0933 family
G9X63_03040	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
G9X63_03050	COG1607	acyl-coa hydrolase
G9X63_03075	COG3693	PFAM glycoside hydrolase, family 10
G9X63_03075	COG3507	Belongs to the glycosyl hydrolase 43 family
G9X63_03075	COG2382	esterase
G9X63_03080	COG2267	carboxylic ester hydrolase activity
G9X63_03095	COG1215	transferase activity, transferring glycosyl groups
G9X63_03105	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
G9X63_03110	COG0123	including yeast histone deacetylase and acetoin utilization protein
G9X63_03125	COG2154	pterin-4-alpha-carbinolamine dehydratase
G9X63_03165	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
G9X63_03190	COG1104	cysteine desulfurase activity
G9X63_03260	COG1253	flavin adenine dinucleotide binding
G9X63_03270	COG0592	DNA-directed DNA polymerase activity
G9X63_03280	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
G9X63_03285	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
G9X63_03290	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
G9X63_03295	COG0137	argininosuccinate synthase activity
G9X63_03305	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
G9X63_03310	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
G9X63_03315	COG0653	protein targeting
G9X63_03340	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
G9X63_03345	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
G9X63_03365	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
G9X63_03375	COG2877	3-deoxy-8-phosphooctulonate synthase activity
G9X63_03385	COG0251	oxidation-reduction process
G9X63_03390	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
G9X63_03390	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
G9X63_03400	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
G9X63_03405	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
G9X63_03410	COG0508	dehydrogenase complex catalyzes the overall conversion of
G9X63_03410	COG0022	dehydrogenase e1 component
G9X63_03415	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
G9X63_03420	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
G9X63_03425	COG1278	Cold shock
G9X63_03440	COG0531	amino acid
G9X63_03450	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
G9X63_03450	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
G9X63_03460	COG0297	glycogen (starch) synthase activity
G9X63_03470	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
G9X63_03480	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
G9X63_03480	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
G9X63_03490	COG1127	ABC transporter
G9X63_03495	COG0812	UDP-N-acetylmuramate dehydrogenase activity
G9X63_03500	COG2877	3-deoxy-8-phosphooctulonate synthase activity
G9X63_03515	COG0571	ribonuclease III activity
G9X63_03520	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
G9X63_03525	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
G9X63_03530	COG1940	carbohydrate kinase activity
G9X63_03540	COG1435	thymidine kinase activity
G9X63_03550	COG1053	succinate dehydrogenase
G9X63_03570	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
G9X63_03585	COG2942	2-epimerase
G9X63_03590	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
G9X63_03590	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
G9X63_03600	COG1104	cysteine desulfurase activity
G9X63_03605	COG0442	prolyl-tRNA aminoacylation
G9X63_03620	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
G9X63_03635	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
G9X63_03645	COG0521	Mo-molybdopterin cofactor biosynthetic process
G9X63_03650	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
G9X63_03655	COG0463	Glycosyl transferase, family 2
G9X63_03660	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
G9X63_03665	COG3341	Caulimovirus viroplasmin
G9X63_03665	COG0328	RNA-DNA hybrid ribonuclease activity
G9X63_03670	COG2095	MarC family integral membrane protein
G9X63_03680	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
G9X63_03685	COG4974	Belongs to the 'phage' integrase family
G9X63_03695	COG0686	Belongs to the AlaDH PNT family
G9X63_03700	COG0802	atpase or kinase
G9X63_03705	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_03710	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
G9X63_03730	COG0167	dihydroorotate dehydrogenase activity
G9X63_03735	COG1674	ftsk spoiiie
G9X63_03745	COG0047	phosphoribosylformylglycinamidine synthase activity
G9X63_03760	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
G9X63_03765	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
G9X63_03770	COG0730	response to heat
G9X63_03775	COG0495	leucyl-tRNA aminoacylation
G9X63_03795	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
G9X63_03800	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
G9X63_03815	COG1032	radical SAM domain protein
G9X63_03820	COG2824	Alkylphosphonate utilization operon protein PhnA
G9X63_03855	COG1012	belongs to the aldehyde dehydrogenase family
G9X63_03865	COG0085	RNA polymerase activity
G9X63_03870	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
G9X63_03880	COG0246	Mannitol dehydrogenase
G9X63_03885	COG1904	glucuronate isomerase
G9X63_03900	COG2271	Major facilitator Superfamily
G9X63_03905	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
G9X63_03905	COG1648	precorrin-2 dehydrogenase activity
G9X63_03910	COG0820	rRNA (adenine-C2-)-methyltransferase activity
G9X63_03945	COG2304	oxidoreductase activity
G9X63_03950	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
G9X63_03970	COG0586	Pfam SNARE associated Golgi protein
G9X63_03975	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_03980	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
G9X63_03985	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
G9X63_03990	COG1045	serine acetyltransferase
G9X63_04045	COG1228	amidohydrolase
G9X63_04050	COG1228	amidohydrolase
G9X63_04065	COG1137	ATPase activity
G9X63_04070	COG0626	cystathionine gamma-synthase activity
G9X63_04090	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
G9X63_04115	COG2244	polysaccharide biosynthetic process
G9X63_04145	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
G9X63_04150	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
G9X63_04160	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
G9X63_04180	COG1086	Polysaccharide biosynthesis protein
G9X63_04195	COG1216	Glycosyl transferase, family 2
G9X63_04200	COG0438	transferase activity, transferring glycosyl groups
G9X63_04255	COG2089	acid synthase
G9X63_04270	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
G9X63_04290	COG1083	cytidylyl-transferase
G9X63_04295	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
G9X63_04345	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
G9X63_04345	COG0140	phosphoribosyl-ATP diphosphatase activity
G9X63_04350	COG0107	imidazoleglycerol-phosphate synthase activity
G9X63_04355	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
G9X63_04385	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
G9X63_04395	COG0148	phosphopyruvate hydratase activity
G9X63_04400	COG3118	belongs to the thioredoxin family
G9X63_04405	COG0667	Aldo Keto reductase
G9X63_04415	COG0357	Ribosomal RNA small subunit methyltransferase G
G9X63_04425	COG1530	ribonuclease E activity
G9X63_04435	COG0776	regulation of translation
G9X63_04445	COG0629	single-stranded DNA binding
G9X63_04465	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
G9X63_04470	COG1984	allophanate hydrolase subunit 2
G9X63_04475	COG0556	nucleotide-excision repair
G9X63_04485	COG3956	TIGRFAM MazG family protein
G9X63_04495	COG0539	negative regulation of cytoplasmic translation
G9X63_04500	COG0673	inositol 2-dehydrogenase activity
G9X63_04520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
G9X63_04525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
G9X63_04530	COG0405	Gamma-glutamyltransferase
G9X63_04535	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
G9X63_04540	COG0436	Aminotransferase
G9X63_04550	COG1929	Belongs to the glycerate kinase type-1 family
G9X63_04565	COG2814	Major facilitator Superfamily
G9X63_04570	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
G9X63_04595	COG3250	beta-galactosidase activity
G9X63_04625	COG3271	cysteine-type peptidase activity
G9X63_04625	COG2274	protein secretion by the type I secretion system
G9X63_04640	COG2814	Major facilitator Superfamily
G9X63_04695	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
G9X63_04700	COG0673	inositol 2-dehydrogenase activity
G9X63_04705	COG0823	Involved in the tonB-independent uptake of proteins
G9X63_04715	COG2020	methyltransferase activity
G9X63_04740	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
G9X63_04760	COG0415	Belongs to the DNA photolyase family
G9X63_04765	COG3046	protein related to deoxyribodipyrimidine photolyase
G9X63_04815	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
G9X63_04835	COG0583	DNA-binding transcription factor activity
G9X63_04840	COG0598	Magnesium transport protein CorA
G9X63_04870	COG3177	Filamentation induced by cAMP protein fic
G9X63_04875	COG0110	maltose O-acetyltransferase activity
G9X63_04880	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
G9X63_04915	COG4771	TonB-dependent receptor
G9X63_04930	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
G9X63_04935	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
G9X63_04940	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
G9X63_04945	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
G9X63_04950	COG2161	toxin-antitoxin pair type II binding
G9X63_05110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
G9X63_05115	COG2217	Heavy metal translocating P-type atpase
G9X63_05135	COG2132	Multicopper oxidase
G9X63_05170	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
G9X63_05175	COG0700	Nucleoside recognition
G9X63_05190	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
G9X63_05200	COG1022	Amp-dependent synthetase and ligase
G9X63_05215	COG0445	tRNA wobble uridine modification
G9X63_05220	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
G9X63_05225	COG0792	nuclease activity
G9X63_05230	COG0321	lipoyl(octanoyl) transferase activity
G9X63_05250	COG0038	chloride channel
G9X63_05255	COG0513	Belongs to the DEAD box helicase family
G9X63_05300	COG1064	alcohol dehydrogenase
G9X63_05475	COG1629	transport
G9X63_05510	COG4771	TonB-dependent receptor
G9X63_05530	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
G9X63_05535	COG1477	protein flavinylation
G9X63_05560	COG1063	alcohol dehydrogenase
G9X63_05575	COG0635	Involved in the biosynthesis of porphyrin-containing compound
G9X63_05580	COG3177	Filamentation induced by cAMP protein fic
G9X63_05585	COG3661	Belongs to the glycosyl hydrolase 67 family
G9X63_05590	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_05595	COG2271	Major facilitator Superfamily
G9X63_05605	COG2855	membrane
G9X63_05610	COG4771	TonB-dependent receptor
G9X63_05630	COG1082	Xylose isomerase domain protein TIM barrel
G9X63_05655	COG4628	conserved protein (DUF2132)
G9X63_05665	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
G9X63_05680	COG1381	Involved in DNA repair and RecF pathway recombination
G9X63_05695	COG0113	porphobilinogen synthase activity
G9X63_05705	COG0261	This protein binds to 23S rRNA in the presence of protein L20
G9X63_05710	COG0211	Belongs to the bacterial ribosomal protein bL27 family
G9X63_05715	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
G9X63_05740	COG0149	triose-phosphate isomerase activity
G9X63_05745	COG1472	Belongs to the glycosyl hydrolase 3 family
G9X63_05750	COG1090	epimerase
G9X63_05760	COG2885	chlorophyll binding
G9X63_05760	COG3047	cAMP biosynthetic process
G9X63_05765	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
G9X63_05765	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
G9X63_05775	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
G9X63_05785	COG0404	The glycine cleavage system catalyzes the degradation of glycine
G9X63_05790	COG2234	aminopeptidase activity
G9X63_05795	COG0557	exoribonuclease II activity
G9X63_05810	COG4989	oxidoreductase activity
G9X63_05815	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
G9X63_05855	COG0343	queuine tRNA-ribosyltransferase activity
G9X63_05860	COG1522	sequence-specific DNA binding
G9X63_05915	COG1858	cytochrome C peroxidase
G9X63_05935	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
G9X63_05950	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
G9X63_05955	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
G9X63_05960	COG0318	PFAM AMP-dependent synthetase and ligase
G9X63_05985	COG2706	6-phosphogluconolactonase activity
G9X63_06005	COG1309	transcriptional regulator
G9X63_06015	COG1063	alcohol dehydrogenase
G9X63_06020	COG2271	Major facilitator Superfamily
G9X63_06045	COG0306	phosphate transporter
G9X63_06060	COG0306	phosphate transporter
G9X63_06080	COG1741	Belongs to the pirin family
G9X63_06085	COG0191	fructose-bisphosphate aldolase activity
G9X63_06090	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
G9X63_06095	COG0088	Forms part of the polypeptide exit tunnel
G9X63_06100	COG0089	rRNA binding
G9X63_06105	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
G9X63_06110	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
G9X63_06115	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
G9X63_06120	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
G9X63_06125	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
G9X63_06130	COG0255	Belongs to the universal ribosomal protein uL29 family
G9X63_06135	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
G9X63_06140	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
G9X63_06145	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
G9X63_06150	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
G9X63_06155	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
G9X63_06160	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
G9X63_06165	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
G9X63_06170	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
G9X63_06175	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
G9X63_06180	COG1841	ribosomal large subunit assembly
G9X63_06185	COG0200	Binds to the 23S rRNA
G9X63_06190	COG0201	protein transport
G9X63_06195	COG0024	Methionine aminopeptidase
G9X63_06200	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
G9X63_06205	COG0257	Belongs to the bacterial ribosomal protein bL36 family
G9X63_06210	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
G9X63_06215	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
G9X63_06220	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
G9X63_06225	COG0202	RNA polymerase activity
G9X63_06230	COG0203	ribosomal protein L17
G9X63_06235	COG0505	Belongs to the CarA family
G9X63_06260	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
G9X63_06285	COG0860	N-Acetylmuramoyl-L-alanine amidase
G9X63_06295	COG2264	protein methyltransferase activity
G9X63_06300	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
G9X63_06305	COG1321	iron dependent repressor
G9X63_06305	COG1108	ABC-type Mn2 Zn2 transport systems permease components
G9X63_06315	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
G9X63_06315	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
G9X63_06320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
G9X63_06340	COG1774	PSP1 C-terminal conserved region
G9X63_06370	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
G9X63_06375	COG0288	reversible hydration of carbon dioxide
G9X63_06380	COG0659	secondary active sulfate transmembrane transporter activity
G9X63_06390	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
G9X63_06405	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
G9X63_06410	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
G9X63_06420	COG1187	pseudouridine synthase activity
G9X63_06430	COG1077	Cell shape determining protein MreB Mrl
G9X63_06445	COG1595	DNA-templated transcription, initiation
G9X63_06455	COG0194	GDP metabolic process
G9X63_06460	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
G9X63_06465	COG2333	competence protein COMEC
G9X63_06465	COG0658	competence protein
G9X63_06470	COG1217	gtp-binding protein TYPA
G9X63_06475	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
G9X63_06490	COG0215	cysteine-tRNA ligase activity
G9X63_06535	COG1007	ATP synthesis coupled electron transport
G9X63_06540	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
G9X63_06545	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
G9X63_06550	COG0713	ATP synthesis coupled electron transport
G9X63_06575	COG0708	Exodeoxyribonuclease III
G9X63_06585	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
G9X63_06590	COG3001	Fructosamine kinase
G9X63_06600	COG1214	PFAM Peptidase M22, glycoprotease
G9X63_06610	COG0594	ribonuclease P activity
G9X63_06615	COG0230	Belongs to the bacterial ribosomal protein bL34 family
G9X63_06620	COG0051	transcription antitermination factor activity, RNA binding
G9X63_06630	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
G9X63_06635	COG0355	proton-transporting ATP synthase activity, rotational mechanism
G9X63_06645	COG1846	Transcriptional regulator
G9X63_06665	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
G9X63_06670	COG1160	GTP binding
G9X63_06680	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
G9X63_06685	COG0552	protein localization to endoplasmic reticulum
G9X63_06695	COG0267	Belongs to the bacterial ribosomal protein bL33 family
G9X63_06700	COG0649	NAD binding
G9X63_06715	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
G9X63_06720	COG0750	zinc metalloprotease
G9X63_06730	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
G9X63_06735	COG0514	ATP-dependent DNA helicase (RecQ)
G9X63_06745	COG1312	Catalyzes the dehydration of D-mannonate
G9X63_06750	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
G9X63_06755	COG0049	tRNA binding
G9X63_06760	COG1959	2 iron, 2 sulfur cluster binding
G9X63_06765	COG0564	pseudouridine synthase activity
G9X63_06800	COG1132	(ABC) transporter
G9X63_06810	COG0525	valine-tRNA ligase activity
G9X63_06825	COG0175	sulfate reduction
G9X63_06830	COG0175	sulfate reduction
G9X63_06840	COG3158	transport of potassium into the cell
G9X63_06850	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
G9X63_06860	COG2755	lipolytic protein G-D-S-L family
G9X63_06865	COG0714	Associated with various cellular activities
G9X63_06870	COG0488	(ABC) transporter
G9X63_06880	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
G9X63_06890	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
G9X63_06895	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
G9X63_06900	COG2255	four-way junction helicase activity
G9X63_06905	COG1505	serine-type exopeptidase activity
G9X63_06925	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
G9X63_06930	COG0527	aspartate kinase activity
G9X63_06935	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
G9X63_06945	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
G9X63_06955	COG3142	Participates in the control of copper homeostasis
G9X63_06960	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
G9X63_06970	COG0606	chelatase, subunit chli
G9X63_06975	COG1619	proteins homologs of microcin C7 resistance protein MccF
G9X63_07000	COG0811	peptide transport
G9X63_07065	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
G9X63_07070	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
G9X63_07070	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
G9X63_07075	COG0251	oxidation-reduction process
G9X63_07085	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
G9X63_07175	COG3409	Peptidoglycan-binding domain 1 protein
G9X63_07175	COG3757	hydrolase, family 25
G9X63_07230	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
G9X63_07250	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
G9X63_07255	COG3201	nicotinamide mononucleotide transporter
G9X63_07260	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
G9X63_07275	COG1595	DNA-templated transcription, initiation
G9X63_07285	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
G9X63_07290	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
G9X63_07305	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
G9X63_07330	COG1595	DNA-templated transcription, initiation
G9X63_07380	COG1446	asparaginase
G9X63_07400	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
G9X63_07405	COG1981	membrane
G9X63_07410	COG0463	Glycosyl transferase, family 2
G9X63_07415	COG0519	Catalyzes the synthesis of GMP from XMP
G9X63_07430	COG0779	Required for maturation of 30S ribosomal subunits
G9X63_07435	COG0195	Participates in both transcription termination and antitermination
G9X63_07440	COG5180	pathogenesis
G9X63_07440	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
G9X63_07460	COG1007	ATP synthesis coupled electron transport
G9X63_07475	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
G9X63_07485	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
G9X63_07495	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
G9X63_07500	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
G9X63_07505	COG0156	8-amino-7-oxononanoate synthase activity
G9X63_07515	COG3384	dioxygenase
G9X63_07520	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
G9X63_07525	COG0183	Belongs to the thiolase family
G9X63_07530	COG1250	3-hydroxyacyl-CoA dehydrogenase
G9X63_07530	COG1024	Enoyl-CoA hydratase
G9X63_07535	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
G9X63_07535	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
G9X63_07545	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
G9X63_07550	COG0346	lactoylglutathione lyase activity
G9X63_07565	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
G9X63_07570	COG1131	(ABC) transporter
G9X63_07575	COG2315	Protein conserved in bacteria
G9X63_07580	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
G9X63_07585	COG0366	Alpha amylase catalytic
G9X63_07590	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
G9X63_07605	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
G9X63_07605	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
G9X63_07620	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
G9X63_07630	COG0564	pseudouridine synthase activity
G9X63_07635	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
G9X63_07640	COG0579	oxidoreductase
G9X63_07645	COG5265	(ABC) transporter
G9X63_07650	COG0129	dihydroxy-acid dehydratase activity
G9X63_07655	COG0028	Belongs to the TPP enzyme family
G9X63_07665	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
G9X63_07670	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
G9X63_07675	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
G9X63_07680	COG0668	transmembrane transport
G9X63_07700	COG1999	signal sequence binding
G9X63_07710	COG0497	DNA recombination
G9X63_07735	COG1262	PFAM Formylglycine-generating sulfatase enzyme
G9X63_07770	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
G9X63_07775	COG0778	Nitroreductase
G9X63_07780	COG0563	adenylate kinase activity
G9X63_07785	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
G9X63_07795	COG0181	hydroxymethylbilane synthase activity
G9X63_07800	COG0470	DNA polymerase III
G9X63_07810	COG0254	rRNA binding
G9X63_07825	COG0247	lactate metabolic process
G9X63_07830	COG0363	glucosamine-6-phosphate deaminase activity
G9X63_07855	COG2226	methyltransferase
G9X63_07870	COG1695	Transcriptional regulator
G9X63_07895	COG0165	Argininosuccinate lyase
G9X63_07900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
G9X63_07905	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
G9X63_07910	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
G9X63_07935	COG0233	cytoplasmic translational termination
G9X63_07940	COG0528	UMP kinase activity
G9X63_07960	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
G9X63_07970	COG0575	Belongs to the CDS family
G9X63_07980	COG1496	oxidoreductase activity
G9X63_07995	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
G9X63_08000	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
G9X63_08015	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
G9X63_08030	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
G9X63_08040	COG2610	gluconate transmembrane transporter activity
G9X63_08045	COG4771	TonB-dependent receptor
G9X63_08055	COG4771	TonB-dependent receptor
G9X63_08065	COG1629	transport
G9X63_08075	COG1506	peptidase
G9X63_08080	COG3590	peptidase
G9X63_08085	COG1506	peptidase
G9X63_08085	COG0823	Involved in the tonB-independent uptake of proteins
G9X63_08090	COG0673	inositol 2-dehydrogenase activity
G9X63_08110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
G9X63_08120	COG4221	oxidoreductase activity
G9X63_08130	COG1473	amidohydrolase
G9X63_08140	COG0346	lactoylglutathione lyase activity
G9X63_08155	COG4654	Cytochrome c, class I
G9X63_08165	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_08170	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
G9X63_08175	COG0138	bifunctional purine biosynthesis protein purh
G9X63_08180	COG0187	DNA topoisomerase II activity
G9X63_08190	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
G9X63_08200	COG0358	DNA primase activity
G9X63_08225	COG0673	inositol 2-dehydrogenase activity
G9X63_08240	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
G9X63_08255	COG0544	peptidyl-prolyl cis-trans isomerase activity
G9X63_08265	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
G9X63_08270	COG0596	Alpha beta hydrolase
G9X63_08270	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
G9X63_08270	COG2226	methyltransferase
G9X63_08275	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
G9X63_08295	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
G9X63_08300	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
G9X63_08305	COG0237	dephospho-CoA kinase activity
G9X63_08310	COG1862	Preprotein translocase
G9X63_08325	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
G9X63_08330	COG1132	(ABC) transporter
G9X63_08360	COG0640	Transcriptional regulator
G9X63_08365	COG3622	Belongs to the hyi family
G9X63_08385	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
G9X63_08400	COG4948	Mandelate Racemase Muconate Lactonizing
G9X63_08405	COG0303	'Molybdopterin
G9X63_08410	COG0315	cyclic pyranopterin monophosphate synthase activity
G9X63_08420	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
G9X63_08430	COG1473	amidohydrolase
G9X63_08440	COG3347	Dehydrogenase
G9X63_08440	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_08445	COG4952	isomerase
G9X63_08455	COG0247	lactate metabolic process
G9X63_08460	COG1139	Iron-sulfur cluster binding protein
G9X63_08465	COG1556	Lactate utilization protein
G9X63_08480	COG1696	Membrane protein involved in D-alanine export
G9X63_08495	COG2010	Cytochrome c
G9X63_08495	COG1529	Aldehyde oxidase and xanthine dehydrogenase
G9X63_08510	COG1136	(ABC) transporter
G9X63_08545	COG0363	glucosamine-6-phosphate deaminase activity
G9X63_08560	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
G9X63_08565	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
G9X63_08570	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
G9X63_08580	COG0793	Belongs to the peptidase S41A family
G9X63_08585	COG0483	inositol monophosphate 1-phosphatase activity
G9X63_08595	COG1132	(ABC) transporter
G9X63_08615	COG0037	tRNA processing
G9X63_08630	COG0326	Molecular chaperone. Has ATPase activity
G9X63_08645	COG0508	dehydrogenase complex catalyzes the overall conversion of
G9X63_08655	COG0534	Mate efflux family protein
G9X63_08660	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
G9X63_08670	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
G9X63_08675	COG0017	Asparaginyl-tRNA synthetase
G9X63_08685	COG1024	Enoyl-CoA hydratase
G9X63_08710	COG5492	domain, Protein
G9X63_08710	COG4932	domain protein
G9X63_08735	COG3781	membrane
G9X63_08745	COG0513	Belongs to the DEAD box helicase family
G9X63_08760	COG1694	Mazg nucleotide pyrophosphohydrolase
G9X63_08765	COG1490	D-aminoacyl-tRNA deacylase activity
G9X63_08770	COG2239	Acts as a magnesium transporter
G9X63_08775	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
G9X63_08785	COG0542	response to heat
G9X63_08800	COG1739	Uncharacterized protein family UPF0029
G9X63_08805	COG1293	RNA-binding protein homologous to eukaryotic snRNP
G9X63_08815	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
G9X63_08835	COG0513	Belongs to the DEAD box helicase family
G9X63_08840	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
G9X63_08850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
G9X63_08875	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
G9X63_08890	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
G9X63_08900	COG1561	YicC-like family, N-terminal region
G9X63_08910	COG1047	Peptidyl-prolyl cis-trans
G9X63_08925	COG1193	negative regulation of DNA recombination
G9X63_08930	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
G9X63_08935	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
G9X63_08965	COG1082	Xylose isomerase domain protein TIM barrel
G9X63_08980	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
G9X63_08985	COG2884	Cell division ATP-binding protein ftsE
G9X63_08990	COG2204	response regulator
G9X63_09000	COG0248	Ppx GppA phosphatase
G9X63_09025	COG1388	LysM domain
G9X63_09025	COG4932	domain protein
G9X63_09035	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
G9X63_09045	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
G9X63_09055	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
G9X63_09060	COG1183	phosphatidylcholine synthase activity
G9X63_09065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
G9X63_09070	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
G9X63_09080	COG0709	Synthesizes selenophosphate from selenide and ATP
G9X63_09090	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
G9X63_09120	COG1575	Belongs to the MenA family. Type 1 subfamily
G9X63_09125	COG0386	Belongs to the glutathione peroxidase family
G9X63_09130	COG0018	arginyl-trna synthetase
G9X63_09135	COG0009	L-threonylcarbamoyladenylate synthase
G9X63_09140	COG0617	tRNA 3'-terminal CCA addition
G9X63_09140	COG0517	IMP dehydrogenase activity
G9X63_09140	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
G9X63_09145	COG0778	Nitroreductase
G9X63_09150	COG2353	YceI-like domain
G9X63_09160	COG0424	maF-like protein
G9X63_09165	COG0316	Belongs to the HesB IscA family
G9X63_09170	COG0396	ATPase activity
G9X63_09175	COG0719	Fe-S assembly protein
G9X63_09180	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
G9X63_09185	COG2166	iron-sulfur cluster assembly
G9X63_09190	COG2151	metal-sulfur cluster biosynthetic enzyme
G9X63_09200	COG0612	Peptidase, M16
G9X63_09220	COG0848	biopolymer transport protein
G9X63_09230	COG0083	homoserine kinase activity
G9X63_09235	COG4974	Belongs to the 'phage' integrase family
G9X63_09240	COG0828	Belongs to the bacterial ribosomal protein bS21 family
G9X63_09245	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
G9X63_09245	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
G9X63_09255	COG0193	aminoacyl-tRNA hydrolase activity
G9X63_09260	COG4221	oxidoreductase activity
G9X63_09295	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
G9X63_09300	COG0635	Involved in the biosynthesis of porphyrin-containing compound
G9X63_09310	COG0859	PFAM glycosyl transferase family 9
G9X63_09315	COG0540	Belongs to the ATCase OTCase family
G9X63_09330	COG0284	orotidine-5'-phosphate decarboxylase activity
G9X63_09340	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
G9X63_09355	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
G9X63_09365	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
G9X63_09395	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
G9X63_09400	COG2912	Transglutaminase-like superfamily
G9X63_09430	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
G9X63_09440	COG5002	protein histidine kinase activity
G9X63_09445	COG0745	RESPONSE REGULATOR receiver
G9X63_09460	COG2996	Protein conserved in bacteria
G9X63_09465	COG2171	N-acyltransferase activity
G9X63_09515	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
G9X63_09525	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
G9X63_09530	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
G9X63_09535	COG1185	polyribonucleotide nucleotidyltransferase activity
G9X63_09540	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
G9X63_09625	COG0673	inositol 2-dehydrogenase activity
G9X63_09635	COG0659	secondary active sulfate transmembrane transporter activity
G9X63_09645	COG3002	Belongs to the UPF0753 family
G9X63_09670	COG0745	RESPONSE REGULATOR receiver
G9X63_09670	COG2205	protein histidine kinase activity
G9X63_09670	COG3292	Two component regulator propeller
G9X63_09720	COG2217	Heavy metal translocating P-type atpase
G9X63_09730	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_09735	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
G9X63_09745	COG1702	phosphate starvation-inducible protein PhoH
G9X63_09750	COG2153	protein acetylation
G9X63_09765	COG1054	Belongs to the UPF0176 family
G9X63_09795	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
G9X63_09805	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
G9X63_09810	COG0300	oxidoreductase activity
G9X63_09815	COG0302	gtp cyclohydrolase
G9X63_09820	COG0720	synthase
G9X63_09825	COG0673	inositol 2-dehydrogenase activity
G9X63_09835	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
G9X63_09855	COG1058	Belongs to the CinA family
G9X63_09855	COG1546	Belongs to the CinA family
G9X63_09860	COG0508	dehydrogenase complex catalyzes the overall conversion of
G9X63_09870	COG1385	rRNA (uridine-N3-)-methyltransferase activity
G9X63_09885	COG0174	glutamine synthetase
G9X63_09890	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
G9X63_09895	COG0004	ammonium transporteR
G9X63_09905	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
G9X63_09915	COG0671	phosphoesterase, PA-phosphatase related
G9X63_09935	COG3118	belongs to the thioredoxin family
G9X63_09940	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
G9X63_09950	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
G9X63_09955	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
G9X63_09960	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
G9X63_09980	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
G9X63_09985	COG0116	Belongs to the methyltransferase superfamily
G9X63_09985	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
G9X63_10000	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
G9X63_10010	COG0318	PFAM AMP-dependent synthetase and ligase
G9X63_10030	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
G9X63_10035	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
G9X63_10040	COG0291	Belongs to the bacterial ribosomal protein bL35 family
G9X63_10045	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
G9X63_10050	COG1104	cysteine desulfurase activity
G9X63_10055	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
G9X63_10065	COG0443	Heat shock 70 kDa protein
G9X63_10080	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
G9X63_10100	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
G9X63_10110	COG0129	dihydroxy-acid dehydratase activity
G9X63_10115	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_10125	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
G9X63_10140	COG0179	Fumarylacetoacetate (FAA) hydrolase
G9X63_10155	COG2721	sulfolactate sulfo-lyase activity
G9X63_10165	COG0738	Major facilitator superfamily
G9X63_10190	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
G9X63_10195	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
G9X63_10200	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
G9X63_10210	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
G9X63_10220	COG0583	DNA-binding transcription factor activity
G9X63_10225	COG2270	Major facilitator Superfamily
G9X63_10235	COG0494	nUDIX hydrolase
G9X63_10240	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
G9X63_10245	COG1331	Highly conserved protein containing a thioredoxin domain
G9X63_10250	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
G9X63_10260	COG0084	hydrolase, TatD family'
G9X63_10280	COG0577	efflux transmembrane transporter activity
G9X63_10310	COG2177	Part of the ABC transporter FtsEX involved in
G9X63_10320	COG1968	undecaprenyl-diphosphatase activity
G9X63_10325	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
G9X63_10330	COG0196	riboflavin kinase activity
G9X63_10335	COG0077	Prephenate dehydratase
G9X63_10335	COG1605	Chorismate mutase
G9X63_10360	COG0067	glutamate synthase
G9X63_10360	COG0069	glutamate synthase activity
G9X63_10360	COG0070	glutamate synthase
G9X63_10370	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
G9X63_10385	COG0436	Aminotransferase
G9X63_10395	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
G9X63_10405	COG3958	Transketolase
G9X63_10410	COG3959	Transketolase, thiamine diphosphate binding domain
G9X63_10415	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
G9X63_10420	COG0179	Fumarylacetoacetate (FAA) hydrolase
G9X63_10425	COG0045	succinate-CoA ligase (ADP-forming) activity
G9X63_10430	COG1136	(ABC) transporter
G9X63_10435	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
G9X63_10440	COG3604	Transcriptional regulator
G9X63_10460	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
G9X63_10465	COG0459	protein refolding
G9X63_10475	COG0738	Major facilitator superfamily
G9X63_10485	COG2814	Major facilitator Superfamily
G9X63_10500	COG0564	pseudouridine synthase activity
G9X63_10510	COG0719	Fe-S assembly protein
G9X63_10520	COG0450	alkyl hydroperoxide reductase
G9X63_10530	COG0124	histidyl-tRNA synthetase
G9X63_10545	COG2226	methyltransferase
G9X63_10550	COG0006	proline dipeptidase activity
G9X63_10555	COG0481	GTPase activity
G9X63_10565	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
G9X63_10575	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
G9X63_10610	COG0504	CTP synthase activity
G9X63_10615	COG0706	membrane insertase activity
G9X63_10620	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
G9X63_10625	COG0463	Glycosyl transferase, family 2
G9X63_10625	COG1216	Glycosyl transferase, family 2
G9X63_10630	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
G9X63_10640	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
G9X63_10655	COG0825	malonyl-CoA metabolic process
G9X63_10660	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
G9X63_10675	COG4771	TonB-dependent receptor
G9X63_10685	COG0531	amino acid
G9X63_10690	COG0657	acetylesterase activity
G9X63_10690	COG2755	lipolytic protein G-D-S-L family
G9X63_10695	COG0697	spore germination
G9X63_10700	COG0336	Belongs to the RNA methyltransferase TrmD family
G9X63_10705	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
G9X63_10710	COG0228	four-way junction DNA binding
G9X63_10725	COG1028	Short-chain dehydrogenase reductase Sdr
G9X63_10730	COG0542	response to heat
G9X63_10745	COG0009	L-threonylcarbamoyladenylate synthase
G9X63_10750	COG1295	ribonuclease BN
G9X63_10760	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
G9X63_10765	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
G9X63_10770	COG0069	glutamate synthase activity
G9X63_10775	COG0488	(ABC) transporter
G9X63_10785	COG0012	GTP binding
G9X63_10805	COG1434	Gram-negative-bacterium-type cell wall biogenesis
G9X63_10810	COG0205	6-phosphofructokinase activity
G9X63_10815	COG1363	Peptidase, m42
G9X63_10820	COG1506	peptidase
G9X63_10820	COG4946	Tricorn protease homolog
G9X63_10820	COG0823	Involved in the tonB-independent uptake of proteins
G9X63_10825	COG0473	3-isopropylmalate dehydrogenase activity
G9X63_10835	COG0066	3-isopropylmalate dehydratase activity
G9X63_10840	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
G9X63_10870	COG1914	H( )-stimulated, divalent metal cation uptake system
G9X63_10880	COG1078	dGTPase activity
G9X63_10885	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
G9X63_10890	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
G9X63_10890	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
G9X63_10895	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
G9X63_10920	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
G9X63_10925	COG0509	glycine decarboxylation via glycine cleavage system
G9X63_10935	COG0632	four-way junction helicase activity
G9X63_10940	COG0741	lytic transglycosylase activity
G9X63_10940	COG1388	LysM domain
G9X63_10945	COG0154	amidase activity
G9X63_10950	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
G9X63_10955	COG3339	Conserved Protein
G9X63_10960	COG0039	L-malate dehydrogenase activity
G9X63_10965	COG0577	efflux transmembrane transporter activity
G9X63_10965	COG1136	(ABC) transporter
G9X63_10970	COG0247	lactate metabolic process
G9X63_10970	COG0277	FAD linked oxidase domain protein
G9X63_10980	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
G9X63_10985	COG2967	ApaG domain
G9X63_10995	COG0513	Belongs to the DEAD box helicase family
G9X63_11005	COG0131	Imidazoleglycerol-phosphate dehydratase
G9X63_11005	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
G9X63_11010	COG2003	Belongs to the UPF0758 family
G9X63_11015	COG0268	Binds directly to 16S ribosomal RNA
G9X63_11025	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
G9X63_11030	COG0681	Belongs to the peptidase S26 family
G9X63_11035	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
G9X63_11045	COG1475	DNA binding
G9X63_11050	COG1192	Involved in chromosome partitioning
G9X63_11055	COG3104	oligopeptide transport
G9X63_11065	COG0405	Gamma-glutamyltransferase
G9X63_11070	COG0156	8-amino-7-oxononanoate synthase activity