locus-tag class description HC341_00005 PF11638 DnaA N-terminal domain HC341_00005 PF08299 Bacterial dnaA protein helix-turn-helix HC341_00005 PF00308 Bacterial dnaA protein HC341_00010 PF02767 DNA polymerase III beta subunit, central domain HC341_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HC341_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HC341_00015 PF02463 RecF/RecN/SMC N terminal domain HC341_00020 PF00204 DNA gyrase B HC341_00020 PF01751 Toprim domain HC341_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_00020 PF18053 DNA gyrase B subunit insert domain HC341_00020 PF00986 DNA gyrase B subunit, carboxyl terminus HC341_00035 PF05746 DALR anticodon binding domain HC341_00035 PF02092 Glycyl-tRNA synthetase beta subunit HC341_00040 PF02091 Glycyl-tRNA synthetase alpha subunit HC341_00050 PF01206 Sulfurtransferase TusA HC341_00055 PF03951 Glutamine synthetase, beta-Grasp domain HC341_00055 PF00120 Glutamine synthetase, catalytic domain HC341_00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_00065 PF00512 His Kinase A (phospho-acceptor) domain HC341_00065 PF00989 PAS fold HC341_00070 PF02954 Bacterial regulatory protein, Fis family HC341_00070 PF00072 Response regulator receiver domain HC341_00070 PF00158 Sigma-54 interaction domain HC341_00080 PF00588 SpoU rRNA Methylase family HC341_00085 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HC341_00085 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HC341_00090 PF02556 Preprotein translocase subunit SecB HC341_00095 PF00581 Rhodanese-like domain HC341_00100 PF01551 Peptidase family M23 HC341_00105 PF13180 PDZ domain HC341_00105 PF03572 Peptidase family S41 HC341_00115 PF01618 MotA/TolQ/ExbB proton channel family HC341_00120 PF13677 Membrane MotB of proton-channel complex MotA/MotB HC341_00120 PF00691 OmpA family HC341_00125 PF05166 YcgL domain HC341_00140 PF03109 ABC1 family HC341_00150 PF01209 ubiE/COQ5 methyltransferase family HC341_00160 PF00004 ATPase family associated with various cellular activities (AAA) HC341_00160 PF07724 AAA domain (Cdc48 subfamily) HC341_00165 PF00227 Proteasome subunit HC341_00170 PF02899 Phage integrase, N-terminal SAM-like domain HC341_00170 PF00589 Phage integrase family HC341_00180 PF01678 Diaminopimelate epimerase HC341_00185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HC341_00185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HC341_00200 PF00206 Lyase HC341_00200 PF14698 Argininosuccinate lyase C-terminal HC341_00205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_00205 PF06580 Histidine kinase HC341_00210 PF00072 Response regulator receiver domain HC341_00210 PF04397 LytTr DNA-binding domain HC341_00215 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HC341_00215 PF03900 Porphobilinogen deaminase, C-terminal domain HC341_00220 PF02602 Uroporphyrinogen-III synthase HemD HC341_00225 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HC341_00235 PF08240 Alcohol dehydrogenase GroES-like domain HC341_00235 PF00107 Zinc-binding dehydrogenase HC341_00240 PF01515 Phosphate acetyl/butaryl transferase HC341_00240 PF03949 Malic enzyme, NAD binding domain HC341_00240 PF00390 Malic enzyme, N-terminal domain HC341_00245 PF12697 Alpha/beta hydrolase family HC341_00250 PF05088 Bacterial NAD-glutamate dehydrogenase HC341_00260 PF00561 alpha/beta hydrolase fold HC341_00265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HC341_00265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HC341_00270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HC341_00270 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_00275 PF02817 e3 binding domain HC341_00275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HC341_00275 PF00364 Biotin-requiring enzyme HC341_00280 PF17831 Pyruvate dehydrogenase E1 component middle domain HC341_00280 PF00456 Transketolase, thiamine diphosphate binding domain HC341_00305 PF01218 Coproporphyrinogen III oxidase HC341_00310 PF01300 Telomere recombination HC341_00315 PF01131 DNA topoisomerase HC341_00315 PF01751 Toprim domain HC341_00315 PF13368 Topoisomerase C-terminal repeat HC341_00320 PF04361 Protein of unknown function (DUF494) HC341_00325 PF17782 DprA winged helix domain HC341_00325 PF02481 DNA recombination-mediator protein A HC341_00335 PF01327 Polypeptide deformylase HC341_00340 PF02911 Formyl transferase, C-terminal domain HC341_00340 PF00551 Formyl transferase HC341_00345 PF01189 16S rRNA methyltransferase RsmB/F HC341_00345 PF01029 NusB family HC341_00355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_00355 PF00672 HAMP domain HC341_00355 PF00512 His Kinase A (phospho-acceptor) domain HC341_00355 PF00989 PAS fold HC341_00360 PF02954 Bacterial regulatory protein, Fis family HC341_00360 PF00072 Response regulator receiver domain HC341_00360 PF00158 Sigma-54 interaction domain HC341_00365 PF02254 TrkA-N domain HC341_00365 PF02080 TrkA-C domain HC341_00370 PF02386 Cation transport protein HC341_00390 PF02580 D-Tyr-tRNA(Tyr) deacylase HC341_00395 PF00475 Imidazoleglycerol-phosphate dehydratase HC341_00400 PF00117 Glutamine amidotransferase class-I HC341_00405 PF00977 Histidine biosynthesis protein HC341_00410 PF00977 Histidine biosynthesis protein HC341_00415 PF01502 Phosphoribosyl-AMP cyclohydrolase HC341_00420 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HC341_00425 PF02416 mttA/Hcf106 family HC341_00430 PF02416 mttA/Hcf106 family HC341_00435 PF00902 Sec-independent protein translocase protein (TatC) HC341_00445 PF00676 Dehydrogenase E1 component HC341_00445 PF16078 2-oxoglutarate dehydrogenase N-terminus HC341_00445 PF16870 2-oxoglutarate dehydrogenase C-terminal HC341_00445 PF02779 Transketolase, pyrimidine binding domain HC341_00450 PF02817 e3 binding domain HC341_00450 PF00364 Biotin-requiring enzyme HC341_00450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HC341_00455 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_00455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HC341_00460 PF00107 Zinc-binding dehydrogenase HC341_00460 PF08240 Alcohol dehydrogenase GroES-like domain HC341_00470 PF00285 Citrate synthase, C-terminal domain HC341_00475 PF00694 Aconitase C-terminal domain HC341_00475 PF00330 Aconitase family (aconitate hydratase) HC341_00480 PF04303 PrpF protein HC341_00485 PF03972 MmgE/PrpD family HC341_00490 PF02566 OsmC-like protein HC341_00495 PF00011 Hsp20/alpha crystallin family HC341_00500 PF00011 Hsp20/alpha crystallin family HC341_00515 PF00732 GMC oxidoreductase HC341_00515 PF05199 GMC oxidoreductase HC341_00520 PF00171 Aldehyde dehydrogenase family HC341_00525 PF00440 Bacterial regulatory proteins, tetR family HC341_00525 PF13977 BetI-type transcriptional repressor, C-terminal HC341_00530 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HC341_00535 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HC341_00540 PF02654 Cobalamin-5-phosphate synthase HC341_00550 PF02277 Phosphoribosyltransferase HC341_00555 PF03186 CobD/Cbib protein HC341_00555 PF17113 Regulatory signalling modulator protein AmpE HC341_00560 PF00155 Aminotransferase class I and II HC341_00565 PF00593 TonB dependent receptor HC341_00565 PF07715 TonB-dependent Receptor Plug Domain HC341_00570 PF02514 CobN/Magnesium Chelatase HC341_00585 PF01497 Periplasmic binding protein HC341_00590 PF01032 FecCD transport family HC341_00595 PF00005 ABC transporter HC341_00600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HC341_00600 PF07685 CobB/CobQ-like glutamine amidotransferase domain HC341_00605 PF12557 Cob(I)alamin adenosyltransferase N terminal HC341_00605 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HC341_00610 PF07685 CobB/CobQ-like glutamine amidotransferase domain HC341_00610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HC341_00620 PF17284 Spermidine synthase tetramerisation domain HC341_00630 PF00672 HAMP domain HC341_00630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_00630 PF02743 Cache domain HC341_00635 PF17810 Arginine decarboxylase helical bundle domain HC341_00635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HC341_00635 PF17944 Arginine decarboxylase C-terminal helical extension HC341_00640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HC341_00640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HC341_00655 PF00750 tRNA synthetases class I (R) HC341_00655 PF05746 DALR anticodon binding domain HC341_00655 PF03485 Arginyl tRNA synthetase N terminal domain HC341_00670 PF00270 DEAD/DEAH box helicase HC341_00670 PF18074 Primosomal protein N C-terminal domain HC341_00670 PF17764 3′ DNA-binding domain (3′BD) HC341_00670 PF00271 Helicase conserved C-terminal domain HC341_00670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HC341_00675 PF02233 NAD(P) transhydrogenase beta subunit HC341_00680 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HC341_00680 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HC341_00680 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HC341_00685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HC341_00685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HC341_00695 PF00682 HMGL-like HC341_00695 PF08502 LeuA allosteric (dimerisation) domain HC341_00700 PF01367 5'-3' exonuclease, C-terminal SAM fold HC341_00700 PF01612 3'-5' exonuclease HC341_00700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HC341_00700 PF00476 DNA polymerase family A HC341_00705 PF03881 Fructosamine kinase HC341_00710 PF04333 MlaA lipoprotein HC341_00720 PF00561 alpha/beta hydrolase fold HC341_00725 PF00990 Diguanylate cyclase, GGDEF domain HC341_00725 PF00563 EAL domain HC341_00725 PF13426 PAS domain HC341_00725 PF08447 PAS fold HC341_00725 PF08448 PAS fold HC341_00725 PF05231 MASE1 HC341_00730 PF00970 Oxidoreductase FAD-binding domain HC341_00730 PF00111 2Fe-2S iron-sulfur cluster binding domain HC341_00730 PF00175 Oxidoreductase NAD-binding domain HC341_00735 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HC341_00740 PF07715 TonB-dependent Receptor Plug Domain HC341_00740 PF00593 TonB dependent receptor HC341_00755 PF06470 SMC proteins Flexible Hinge Domain HC341_00755 PF02463 RecF/RecN/SMC N terminal domain HC341_00800 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HC341_00815 PF04851 Type III restriction enzyme, res subunit HC341_00815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HC341_00815 PF00271 Helicase conserved C-terminal domain HC341_00815 PF08463 EcoEI R protein C-terminal HC341_00820 PF01420 Type I restriction modification DNA specificity domain HC341_00825 PF00270 DEAD/DEAH box helicase HC341_00825 PF13749 Putative ATP-dependent DNA helicase recG C-terminal HC341_00825 PF17191 RecG wedge domain HC341_00835 PF02661 Fic/DOC family HC341_00835 PF13784 Fic/DOC family N-terminal HC341_00870 PF03372 Endonuclease/Exonuclease/phosphatase family HC341_00875 PF01230 HIT domain HC341_00880 PF01432 Peptidase family M3 HC341_00900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HC341_00900 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_00905 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_00945 PF00873 AcrB/AcrD/AcrF family HC341_00955 PF08362 YcdC-like protein, C-terminal region HC341_00955 PF00440 Bacterial regulatory proteins, tetR family HC341_00975 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HC341_00975 PF01488 Shikimate / quinate 5-dehydrogenase HC341_00975 PF08501 Shikimate dehydrogenase substrate binding domain HC341_00980 PF00490 Delta-aminolevulinic acid dehydratase HC341_00985 PF04055 Radical SAM superfamily HC341_00985 PF06463 Molybdenum Cofactor Synthesis C HC341_00990 PF00293 NUDIX domain HC341_00995 PF01208 Uroporphyrinogen decarboxylase (URO-D) HC341_01000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HC341_01000 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_01005 PF00310 Glutamine amidotransferases class-II HC341_01005 PF04898 Glutamate synthase central domain HC341_01005 PF01645 Conserved region in glutamate synthase HC341_01005 PF01493 GXGXG motif HC341_01015 PF13286 Phosphohydrolase-associated domain HC341_01015 PF01966 HD domain HC341_01020 PF01761 3-dehydroquinate synthase HC341_01025 PF01202 Shikimate kinase HC341_01030 PF00263 Bacterial type II and III secretion system protein HC341_01030 PF11741 AMIN domain HC341_01030 PF03958 Bacterial type II/III secretion system short domain HC341_01030 PF07660 Secretin and TonB N terminus short domain HC341_01055 PF00912 Transglycosylase HC341_01055 PF17092 Penicillin-binding protein OB-like domain HC341_01055 PF00905 Penicillin binding protein transpeptidase domain HC341_01065 PF00285 Citrate synthase, C-terminal domain HC341_01070 PF01197 Ribosomal protein L31 HC341_01085 PF02913 FAD linked oxidases, C-terminal domain HC341_01085 PF01565 FAD binding domain HC341_01090 PF11799 impB/mucB/samB family C-terminal domain HC341_01090 PF00817 impB/mucB/samB family HC341_01105 PF06969 HemN C-terminal domain HC341_01105 PF04055 Radical SAM superfamily HC341_01110 PF01725 Ham1 family HC341_01115 PF03725 3' exoribonuclease family, domain 2 HC341_01115 PF01138 3' exoribonuclease family, domain 1 HC341_01120 PF08340 Domain of unknown function (DUF1732) HC341_01120 PF03755 YicC-like family, N-terminal region HC341_01125 PF00625 Guanylate kinase HC341_01130 PF01192 RNA polymerase Rpb6 HC341_01135 PF02824 TGS domain HC341_01135 PF13291 ACT domain HC341_01135 PF04607 Region found in RelA / SpoT proteins HC341_01145 PF01042 Endoribonuclease L-PSP HC341_01150 PF17191 RecG wedge domain HC341_01150 PF00271 Helicase conserved C-terminal domain HC341_01150 PF00270 DEAD/DEAH box helicase HC341_01155 PF04345 Chorismate lyase HC341_01160 PF01040 UbiA prenyltransferase family HC341_01165 PF13396 Phospholipase_D-nuclease N-terminal HC341_01165 PF13091 PLD-like domain HC341_01170 PF08376 Nitrate and nitrite sensing HC341_01170 PF03861 ANTAR domain HC341_01175 PF00005 ABC transporter HC341_01180 PF00528 Binding-protein-dependent transport system inner membrane component HC341_01185 PF00005 ABC transporter HC341_01190 PF04324 BFD-like [2Fe-2S] binding domain HC341_01190 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HC341_01190 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HC341_01190 PF18267 Rubredoxin NAD+ reductase C-terminal domain HC341_01190 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_01200 PF01568 Molydopterin dinucleotide binding domain HC341_01200 PF00384 Molybdopterin oxidoreductase HC341_01200 PF04324 BFD-like [2Fe-2S] binding domain HC341_01200 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HC341_01205 PF10414 Sirohaem synthase dimerisation region HC341_01205 PF14824 Sirohaem biosynthesis protein central HC341_01205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_01260 PF13817 IS66 C-terminal element HC341_01260 PF13007 Transposase C of IS166 homeodomain HC341_01260 PF03050 Transposase IS66 family HC341_01260 PF13005 zinc-finger binding domain of transposase IS66 HC341_01290 PF01435 Peptidase family M48 HC341_01325 PF00271 Helicase conserved C-terminal domain HC341_01325 PF00270 DEAD/DEAH box helicase HC341_01335 PF00768 D-alanyl-D-alanine carboxypeptidase HC341_01355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HC341_01360 PF00291 Pyridoxal-phosphate dependent enzyme HC341_01360 PF00585 C-terminal regulatory domain of Threonine dehydratase HC341_01365 PF00575 S1 RNA binding domain HC341_01365 PF09371 Tex-like protein N-terminal domain HC341_01365 PF16921 Tex protein YqgF-like domain HC341_01365 PF17674 HHH domain HC341_01380 PF00892 EamA-like transporter family HC341_01390 PF04225 Opacity-associated protein A LysM-like domain HC341_01390 PF01551 Peptidase family M23 HC341_01405 PF05164 Cell division protein ZapA HC341_01415 PF03695 Uncharacterised protein family (UPF0149) HC341_01420 PF05195 Aminopeptidase P, N-terminal domain HC341_01420 PF00557 Metallopeptidase family M24 HC341_01425 PF01494 FAD binding domain HC341_01430 PF01494 FAD binding domain HC341_01435 PF09370 Phosphoenolpyruvate hydrolase-like HC341_01435 PF02954 Bacterial regulatory protein, Fis family HC341_01435 PF00158 Sigma-54 interaction domain HC341_01465 PF13817 IS66 C-terminal element HC341_01465 PF13005 zinc-finger binding domain of transposase IS66 HC341_01465 PF13007 Transposase C of IS166 homeodomain HC341_01465 PF03050 Transposase IS66 family HC341_01480 PF00005 ABC transporter HC341_01480 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_01490 PF09370 Phosphoenolpyruvate hydrolase-like HC341_01500 PF15975 Flotillin HC341_01500 PF01145 SPFH domain / Band 7 family HC341_01505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HC341_01505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HC341_01510 PF01619 Proline dehydrogenase HC341_01510 PF00171 Aldehyde dehydrogenase family HC341_01510 PF14850 DNA-binding domain of Proline dehydrogenase HC341_01510 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HC341_01520 PF00528 Binding-protein-dependent transport system inner membrane component HC341_01525 PF08669 Glycine cleavage T-protein C-terminal barrel domain HC341_01525 PF01571 Aminomethyltransferase folate-binding domain HC341_01530 PF01597 Glycine cleavage H-protein HC341_01535 PF02347 Glycine cleavage system P-protein HC341_01540 PF02347 Glycine cleavage system P-protein HC341_01545 PF00294 pfkB family carbohydrate kinase HC341_01550 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_01550 PF12806 Acetyl-CoA dehydrogenase C-terminal like HC341_01550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_01550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_01555 PF00155 Aminotransferase class I and II HC341_01565 PF13458 Periplasmic binding protein HC341_01570 PF02653 Branched-chain amino acid transport system / permease component HC341_01580 PF00005 ABC transporter HC341_01580 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_01585 PF00005 ABC transporter HC341_01595 PF01464 Transglycosylase SLT domain HC341_01605 PF01923 Cobalamin adenosyltransferase HC341_01615 PF04675 DNA ligase N terminus HC341_01615 PF01068 ATP dependent DNA ligase domain HC341_01615 PF04679 ATP dependent DNA ligase C terminal region HC341_01630 PF00270 DEAD/DEAH box helicase HC341_01630 PF08494 DEAD/H associated HC341_01630 PF00271 Helicase conserved C-terminal domain HC341_01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_01645 PF03466 LysR substrate binding domain HC341_01655 PF00156 Phosphoribosyl transferase domain HC341_01655 PF09182 Bacterial purine repressor, N-terminal HC341_01660 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_01665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HC341_01670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_01685 PF13404 AsnC-type helix-turn-helix domain HC341_01685 PF01037 Lrp/AsnC ligand binding domain HC341_01690 PF04172 LrgB-like family HC341_01695 PF03788 LrgA family HC341_01705 PF00293 NUDIX domain HC341_01710 PF01590 GAF domain HC341_01710 PF02896 PEP-utilising enzyme, TIM barrel domain HC341_01710 PF05524 PEP-utilising enzyme, N-terminal HC341_01710 PF00391 PEP-utilising enzyme, mobile domain HC341_01720 PF00210 Ferritin-like domain HC341_01735 PF01118 Semialdehyde dehydrogenase, NAD binding domain HC341_01735 PF02774 Semialdehyde dehydrogenase, dimerisation domain HC341_01740 PF01521 Iron-sulphur cluster biosynthesis HC341_01745 PF03702 Anhydro-N-acetylmuramic acid kinase HC341_01750 PF01479 S4 domain HC341_01750 PF00579 tRNA synthetases class I (W and Y) HC341_01780 PF02127 Aminopeptidase I zinc metalloprotease (M18) HC341_01785 PF08279 HTH domain HC341_01785 PF03099 Biotin/lipoate A/B protein ligase family HC341_01785 PF02237 Biotin protein ligase C terminal domain HC341_01790 PF03309 Type III pantothenate kinase HC341_01805 PF02586 SOS response associated peptidase (SRAP) HC341_01810 PF03009 Glycerophosphoryl diester phosphodiesterase family HC341_01820 PF00009 Elongation factor Tu GTP binding domain HC341_01820 PF03144 Elongation factor Tu domain 2 HC341_01820 PF09105 Elongation factor SelB, winged helix HC341_01820 PF09107 Elongation factor SelB, winged helix HC341_01820 PF09106 Elongation factor SelB, winged helix HC341_01825 PF12390 Selenocysteine synthase N terminal HC341_01825 PF03841 L-seryl-tRNA selenium transferase HC341_01855 PF01740 STAS domain HC341_01855 PF00916 Sulfate permease family HC341_01860 PF01842 ACT domain HC341_01860 PF00551 Formyl transferase HC341_01865 PF01266 FAD dependent oxidoreductase HC341_01875 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_01875 PF17806 Sarcosine oxidase A3 domain HC341_01875 PF01571 Aminomethyltransferase folate-binding domain HC341_01875 PF08669 Glycine cleavage T-protein C-terminal barrel domain HC341_01885 PF00120 Glutamine synthetase, catalytic domain HC341_01895 PF01493 GXGXG motif HC341_01900 PF01645 Conserved region in glutamate synthase HC341_01910 PF02728 Copper amine oxidase, N3 domain HC341_01910 PF01179 Copper amine oxidase, enzyme domain HC341_01935 PF00781 Diacylglycerol kinase catalytic domain HC341_01950 PF04349 Periplasmic glucan biosynthesis protein, MdoG HC341_01955 PF13632 Glycosyl transferase family group 2 HC341_01965 PF16123 Hydroxyacylglutathione hydrolase C-terminus HC341_01965 PF00753 Metallo-beta-lactamase superfamily HC341_01970 PF02574 Homocysteine S-methyltransferase HC341_01980 PF00440 Bacterial regulatory proteins, tetR family HC341_01985 PF02028 BCCT, betaine/carnitine/choline family transporter HC341_01990 PF03466 LysR substrate binding domain HC341_01990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_02000 PF04235 Protein of unknown function (DUF418) HC341_02005 PF01625 Peptide methionine sulfoxide reductase HC341_02030 PF03466 LysR substrate binding domain HC341_02030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_02035 PF02146 Sir2 family HC341_02040 PF01177 Asp/Glu/Hydantoin racemase HC341_02065 PF00692 dUTPase HC341_02095 PF00565 Staphylococcal nuclease homologue HC341_02100 PF04851 Type III restriction enzyme, res subunit HC341_02100 PF08463 EcoEI R protein C-terminal HC341_02100 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HC341_02100 PF00271 Helicase conserved C-terminal domain HC341_02135 PF02599 Global regulator protein family HC341_02140 PF02586 SOS response associated peptidase (SRAP) HC341_02195 PF00589 Phage integrase family HC341_02205 PF06508 Queuosine biosynthesis protein QueC HC341_02210 PF04055 Radical SAM superfamily HC341_02220 PF00691 OmpA family HC341_02225 PF04052 TolB amino-terminal domain HC341_02225 PF07676 WD40-like Beta Propeller Repeat HC341_02235 PF02472 Biopolymer transport protein ExbD/TolR HC341_02240 PF01618 MotA/TolQ/ExbB proton channel family HC341_02245 PF03061 Thioesterase superfamily HC341_02250 PF00158 Sigma-54 interaction domain HC341_02250 PF00072 Response regulator receiver domain HC341_02260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_02260 PF00512 His Kinase A (phospho-acceptor) domain HC341_02265 PF17864 RuvB AAA lid domain HC341_02265 PF05491 RuvB C-terminal winged helix domain HC341_02265 PF05496 Holliday junction DNA helicase RuvB P-loop domain HC341_02270 PF07499 RuvA, C-terminal domain HC341_02270 PF01330 RuvA N terminal domain HC341_02275 PF02075 Crossover junction endodeoxyribonuclease RuvC HC341_02280 PF01709 Transcriptional regulator HC341_02290 PF00005 ABC transporter HC341_02290 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_02295 PF00005 ABC transporter HC341_02300 PF11862 Domain of unknown function (DUF3382) HC341_02300 PF02653 Branched-chain amino acid transport system / permease component HC341_02320 PF13193 AMP-binding enzyme C-terminal domain HC341_02320 PF00501 AMP-binding enzyme HC341_02325 PF00425 chorismate binding enzyme HC341_02325 PF04715 Anthranilate synthase component I, N terminal region HC341_02335 PF00108 Thiolase, N-terminal domain HC341_02335 PF02803 Thiolase, C-terminal domain HC341_02340 PF07879 PHB/PHA accumulation regulator DNA-binding domain HC341_02340 PF05233 PHB accumulation regulatory domain HC341_02345 PF00106 short chain dehydrogenase HC341_02350 PF00561 alpha/beta hydrolase fold HC341_02360 PF01435 Peptidase family M48 HC341_02365 PF01594 AI-2E family transporter HC341_02370 PF01842 ACT domain HC341_02375 PF00701 Dihydrodipicolinate synthetase family HC341_02380 PF06804 NlpB/DapX lipoprotein HC341_02385 PF02769 AIR synthase related protein, C-terminal domain HC341_02385 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HC341_02385 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HC341_02390 PF00501 AMP-binding enzyme HC341_02390 PF13193 AMP-binding enzyme C-terminal domain HC341_02405 PF00920 Dehydratase family HC341_02410 PF03969 AFG1-like ATPase HC341_02420 PF00850 Histone deacetylase domain HC341_02440 PF00561 alpha/beta hydrolase fold HC341_02445 PF02325 YGGT family HC341_02450 PF03807 NADP oxidoreductase coenzyme F420-dependent HC341_02450 PF14748 Pyrroline-5-carboxylate reductase dimerisation HC341_02455 PF01168 Alanine racemase, N-terminal domain HC341_02460 PF00437 Type II/IV secretion system protein HC341_02465 PF00437 Type II/IV secretion system protein HC341_02470 PF01425 Amidase HC341_02475 PF03061 Thioesterase superfamily HC341_02490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_02490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_02490 PF09317 Domain of unknown function (DUF1974) HC341_02490 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_02505 PF01979 Amidohydrolase family HC341_02510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HC341_02510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HC341_02515 PF00156 Phosphoribosyl transferase domain HC341_02520 PF03652 Holliday junction resolvase HC341_02525 PF02622 Uncharacterized ACR, COG1678 HC341_02540 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HC341_02540 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HC341_02545 PF00072 Response regulator receiver domain HC341_02550 PF00072 Response regulator receiver domain HC341_02555 PF01584 CheW-like domain HC341_02560 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HC341_02560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_02565 PF01739 CheR methyltransferase, SAM binding domain HC341_02565 PF03705 CheR methyltransferase, all-alpha domain HC341_02570 PF00072 Response regulator receiver domain HC341_02570 PF02895 Signal transducing histidine kinase, homodimeric domain HC341_02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_02570 PF01627 Hpt domain HC341_02570 PF01584 CheW-like domain HC341_02575 PF01339 CheB methylesterase HC341_02575 PF00072 Response regulator receiver domain HC341_02585 PF04452 RNA methyltransferase HC341_02590 PF02219 Methylenetetrahydrofolate reductase HC341_02595 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain HC341_02595 PF05221 S-adenosyl-L-homocysteine hydrolase HC341_02600 PF02772 S-adenosylmethionine synthetase, central domain HC341_02600 PF02773 S-adenosylmethionine synthetase, C-terminal domain HC341_02600 PF00438 S-adenosylmethionine synthetase, N-terminal domain HC341_02605 PF08241 Methyltransferase domain HC341_02610 PF13649 Methyltransferase domain HC341_02615 PF00456 Transketolase, thiamine diphosphate binding domain HC341_02615 PF02779 Transketolase, pyrimidine binding domain HC341_02615 PF02780 Transketolase, C-terminal domain HC341_02620 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HC341_02620 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HC341_02625 PF00162 Phosphoglycerate kinase HC341_02630 PF01259 SAICAR synthetase HC341_02635 PF01613 Flavin reductase like domain HC341_02675 PF00873 AcrB/AcrD/AcrF family HC341_02680 PF00990 Diguanylate cyclase, GGDEF domain HC341_02680 PF00072 Response regulator receiver domain HC341_02685 PF00501 AMP-binding enzyme HC341_02690 PF00106 short chain dehydrogenase HC341_02695 PF00857 Isochorismatase family HC341_02705 PF00317 Ribonucleotide reductase, all-alpha domain HC341_02705 PF03477 ATP cone domain HC341_02705 PF02867 Ribonucleotide reductase, barrel domain HC341_02715 PF00589 Phage integrase family HC341_02715 PF13495 Phage integrase, N-terminal SAM-like domain HC341_02740 PF00583 Acetyltransferase (GNAT) family HC341_02745 PF10503 Esterase PHB depolymerase HC341_02755 PF14437 MafB19-like deaminase HC341_02780 PF00528 Binding-protein-dependent transport system inner membrane component HC341_02785 PF00005 ABC transporter HC341_02795 PF09347 Domain of unknown function (DUF1989) HC341_02800 PF02785 Biotin carboxylase C-terminal domain HC341_02800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HC341_02800 PF00289 Biotin carboxylase, N-terminal domain HC341_02810 PF01425 Amidase HC341_02815 PF01230 HIT domain HC341_02825 PF02798 Glutathione S-transferase, N-terminal domain HC341_02845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HC341_02860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HC341_02860 PF00117 Glutamine amidotransferase class-I HC341_02865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HC341_02865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HC341_02865 PF02142 MGS-like domain HC341_02870 PF03449 Transcription elongation factor, N-terminal HC341_02870 PF01272 Transcription elongation factor, GreA/GreB, C-term HC341_02875 PF01985 CRS1 / YhbY (CRM) domain HC341_02885 PF01728 FtsJ-like methyltransferase HC341_02890 PF06480 FtsH Extracellular HC341_02890 PF00004 ATPase family associated with various cellular activities (AAA) HC341_02890 PF17862 AAA+ lid domain HC341_02890 PF01434 Peptidase family M41 HC341_02895 PF00809 Pterin binding enzyme HC341_02900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HC341_02900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HC341_02900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HC341_02900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HC341_02905 PF00121 Triosephosphate isomerase HC341_02910 PF03840 Preprotein translocase SecG subunit HC341_02920 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 HC341_02925 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HC341_02930 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit HC341_02935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit HC341_02945 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HC341_02945 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HC341_02945 PF10531 SLBB domain HC341_02950 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HC341_02950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HC341_02950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region HC341_02950 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal HC341_02950 PF00384 Molybdopterin oxidoreductase HC341_02950 PF00384 Molybdopterin oxidoreductase HC341_02955 PF00146 NADH dehydrogenase HC341_02960 PF12838 4Fe-4S dicluster domain HC341_02965 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 HC341_02970 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L HC341_02975 PF00361 Proton-conducting membrane transporter HC341_02975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HC341_02980 PF00361 Proton-conducting membrane transporter HC341_02980 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus HC341_02985 PF00361 Proton-conducting membrane transporter HC341_03010 PF12704 MacB-like periplasmic core domain HC341_03010 PF00005 ABC transporter HC341_03010 PF02687 FtsX-like permease family HC341_03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_03015 PF00672 HAMP domain HC341_03015 PF12729 Four helix bundle sensory module for signal transduction HC341_03045 PF01758 Sodium Bile acid symporter family HC341_03055 PF13193 AMP-binding enzyme C-terminal domain HC341_03055 PF00501 AMP-binding enzyme HC341_03060 PF00108 Thiolase, N-terminal domain HC341_03060 PF02803 Thiolase, C-terminal domain HC341_03065 PF17862 AAA+ lid domain HC341_03065 PF06480 FtsH Extracellular HC341_03065 PF01434 Peptidase family M41 HC341_03065 PF00004 ATPase family associated with various cellular activities (AAA) HC341_03090 PF08918 PhoQ Sensor HC341_03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_03095 PF00486 Transcriptional regulatory protein, C terminal HC341_03095 PF00072 Response regulator receiver domain HC341_03110 PF00210 Ferritin-like domain HC341_03115 PF01292 Prokaryotic cytochrome b561 HC341_03120 PF04264 YceI-like domain HC341_03125 PF01061 ABC-2 type transporter HC341_03130 PF00005 ABC transporter HC341_03135 PF00881 Nitroreductase family HC341_03140 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HC341_03140 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HC341_03145 PF00857 Isochorismatase family HC341_03160 PF00109 Beta-ketoacyl synthase, N-terminal domain HC341_03160 PF14765 Polyketide synthase dehydratase HC341_03160 PF00550 Phosphopantetheine attachment site HC341_03160 PF08659 KR domain HC341_03160 PF02801 Beta-ketoacyl synthase, C-terminal domain HC341_03160 PF08240 Alcohol dehydrogenase GroES-like domain HC341_03160 PF00698 Acyl transferase domain HC341_03160 PF16197 Ketoacyl-synthetase C-terminal extension HC341_03170 PF00563 EAL domain HC341_03170 PF12792 CSS motif domain associated with EAL HC341_03175 PF00990 Diguanylate cyclase, GGDEF domain HC341_03180 PF08482 ATP-dependent helicase C-terminal HC341_03180 PF00271 Helicase conserved C-terminal domain HC341_03180 PF04408 Helicase associated domain (HA2) HC341_03180 PF00270 DEAD/DEAH box helicase HC341_03200 PF01050 Mannose-6-phosphate isomerase HC341_03200 PF00483 Nucleotidyl transferase HC341_03205 PF00005 ABC transporter HC341_03205 PF12848 ABC transporter HC341_03210 PF18030 RimK PreATP-grasp domain HC341_03210 PF08443 RimK-like ATP-grasp domain HC341_03215 PF18030 RimK PreATP-grasp domain HC341_03215 PF08443 RimK-like ATP-grasp domain HC341_03220 PF00464 Serine hydroxymethyltransferase HC341_03225 PF03477 ATP cone domain HC341_03230 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HC341_03230 PF01872 RibD C-terminal domain HC341_03235 PF00677 Lumazine binding domain HC341_03240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HC341_03240 PF00925 GTP cyclohydrolase II HC341_03245 PF00885 6,7-dimethyl-8-ribityllumazine synthase HC341_03250 PF01029 NusB family HC341_03255 PF00586 AIR synthase related protein, N-terminal domain HC341_03255 PF02769 AIR synthase related protein, C-terminal domain HC341_03260 PF04608 Phosphatidylglycerophosphatase A HC341_03270 PF02896 PEP-utilising enzyme, TIM barrel domain HC341_03270 PF00391 PEP-utilising enzyme, mobile domain HC341_03270 PF05524 PEP-utilising enzyme, N-terminal HC341_03275 PF00293 NUDIX domain HC341_03275 PF13344 Haloacid dehalogenase-like hydrolase HC341_03295 PF01910 Thiamine-binding protein HC341_03300 PF04286 Protein of unknown function (DUF445) HC341_03310 PF00950 ABC 3 transport family HC341_03315 PF00005 ABC transporter HC341_03320 PF01297 Zinc-uptake complex component A periplasmic HC341_03325 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HC341_03335 PF00873 AcrB/AcrD/AcrF family HC341_03340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HC341_03350 PF04298 Putative neutral zinc metallopeptidase HC341_03355 PF01661 Macro domain HC341_03375 PF00571 CBS domain HC341_03375 PF01769 Divalent cation transporter HC341_03375 PF03448 MgtE intracellular N domain HC341_03385 PF00440 Bacterial regulatory proteins, tetR family HC341_03385 PF08359 YsiA-like protein, C-terminal region HC341_03390 PF00378 Enoyl-CoA hydratase/isomerase HC341_03395 PF00501 AMP-binding enzyme HC341_03395 PF13193 AMP-binding enzyme C-terminal domain HC341_03400 PF01575 MaoC like domain HC341_03410 PF00106 short chain dehydrogenase HC341_03420 PF00005 ABC transporter HC341_03435 PF00440 Bacterial regulatory proteins, tetR family HC341_03435 PF08361 MAATS-type transcriptional repressor, C-terminal region HC341_03440 PF04262 Glutamate-cysteine ligase HC341_03445 PF08659 KR domain HC341_03445 PF00698 Acyl transferase domain HC341_03445 PF14765 Polyketide synthase dehydratase HC341_03445 PF00550 Phosphopantetheine attachment site HC341_03445 PF02801 Beta-ketoacyl synthase, C-terminal domain HC341_03445 PF00107 Zinc-binding dehydrogenase HC341_03445 PF16197 Ketoacyl-synthetase C-terminal extension HC341_03445 PF08240 Alcohol dehydrogenase GroES-like domain HC341_03445 PF00109 Beta-ketoacyl synthase, N-terminal domain HC341_03455 PF01883 Iron-sulfur cluster assembly protein HC341_03460 PF00180 Isocitrate/isopropylmalate dehydrogenase HC341_03470 PF08241 Methyltransferase domain HC341_03480 PF00171 Aldehyde dehydrogenase family HC341_03485 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HC341_03490 PF00155 Aminotransferase class I and II HC341_03495 PF00378 Enoyl-CoA hydratase/isomerase HC341_03500 PF00378 Enoyl-CoA hydratase/isomerase HC341_03505 PF13193 AMP-binding enzyme C-terminal domain HC341_03505 PF00501 AMP-binding enzyme HC341_03510 PF13380 CoA binding domain HC341_03515 PF01053 Cys/Met metabolism PLP-dependent enzyme HC341_03525 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal HC341_03525 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal HC341_03530 PF00440 Bacterial regulatory proteins, tetR family HC341_03540 PF02769 AIR synthase related protein, C-terminal domain HC341_03540 PF00586 AIR synthase related protein, N-terminal domain HC341_03550 PF03781 Sulfatase-modifying factor enzyme 1 HC341_03550 PF12867 DinB superfamily HC341_03560 PF00005 ABC transporter HC341_03565 PF00528 Binding-protein-dependent transport system inner membrane component HC341_03575 PF00571 CBS domain HC341_03590 PF04389 Peptidase family M28 HC341_03595 PF00886 Ribosomal protein S16 HC341_03600 PF01782 RimM N-terminal domain HC341_03600 PF05239 PRC-barrel domain HC341_03605 PF01746 tRNA (Guanine-1)-methyltransferase HC341_03610 PF01245 Ribosomal protein L19 HC341_03630 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_03640 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_03645 PF00171 Aldehyde dehydrogenase family HC341_03650 PF02311 AraC-like ligand binding domain HC341_03650 PF12833 Helix-turn-helix domain HC341_03655 PF00465 Iron-containing alcohol dehydrogenase HC341_03665 PF02146 Sir2 family HC341_03675 PF01641 SelR domain HC341_03680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HC341_03680 PF00205 Thiamine pyrophosphate enzyme, central domain HC341_03680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HC341_03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_03690 PF00183 Hsp90 protein HC341_03695 PF05209 Septum formation inhibitor MinC, N-terminal domain HC341_03695 PF03775 Septum formation inhibitor MinC, C-terminal domain HC341_03700 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HC341_03705 PF03776 Septum formation topological specificity factor MinE HC341_03710 PF01464 Transglycosylase SLT domain HC341_03710 PF01476 LysM domain HC341_03715 PF00753 Metallo-beta-lactamase superfamily HC341_03715 PF16123 Hydroxyacylglutathione hydrolase C-terminus HC341_03725 PF00075 RNase H HC341_03730 PF00929 Exonuclease HC341_03735 PF13419 Haloacid dehalogenase-like hydrolase HC341_03755 PF02899 Phage integrase, N-terminal SAM-like domain HC341_03755 PF00589 Phage integrase family HC341_03770 PF00436 Single-strand binding protein family HC341_03790 PF18818 Metallopeptidase superfamily domain HC341_03790 PF08401 Domain of unknown function (DUF1738) HC341_03810 PF04002 RadC-like JAB domain HC341_03815 PF01425 Amidase HC341_03820 PF00795 Carbon-nitrogen hydrolase HC341_03830 PF00528 Binding-protein-dependent transport system inner membrane component HC341_03835 PF08402 TOBE domain HC341_03835 PF00005 ABC transporter HC341_03850 PF02979 Nitrile hydratase, alpha chain HC341_03865 PF00005 ABC transporter HC341_03935 PF05598 Transposase domain (DUF772) HC341_03950 PF02028 BCCT, betaine/carnitine/choline family transporter HC341_03980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HC341_03985 PF00873 AcrB/AcrD/AcrF family HC341_03990 PF07885 Ion channel HC341_04005 PF04264 YceI-like domain HC341_04015 PF02899 Phage integrase, N-terminal SAM-like domain HC341_04015 PF00589 Phage integrase family HC341_04020 PF12728 Helix-turn-helix domain HC341_04035 PF12838 4Fe-4S dicluster domain HC341_04040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit HC341_04045 PF00330 Aconitase family (aconitate hydratase) HC341_04045 PF00694 Aconitase C-terminal domain HC341_04060 PF01258 Prokaryotic dksA/traR C4-type zinc finger HC341_04065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HC341_04075 PF01593 Flavin containing amine oxidoreductase HC341_04080 PF01654 Cytochrome bd terminal oxidase subunit I HC341_04085 PF02322 Cytochrome bd terminal oxidase subunit II HC341_04090 PF01266 FAD dependent oxidoreductase HC341_04110 PF01695 IstB-like ATP binding protein HC341_04120 PF01609 Transposase DDE domain HC341_04120 PF05598 Transposase domain (DUF772) HC341_04125 PF01593 Flavin containing amine oxidoreductase HC341_04140 PF05099 Tellurite resistance protein TerB HC341_04140 PF00226 DnaJ domain HC341_04165 PF01565 FAD binding domain HC341_04165 PF02913 FAD linked oxidases, C-terminal domain HC341_04165 PF13183 4Fe-4S dicluster domain HC341_04170 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_04180 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_04200 PF13007 Transposase C of IS166 homeodomain HC341_04200 PF13817 IS66 C-terminal element HC341_04200 PF13005 zinc-finger binding domain of transposase IS66 HC341_04200 PF03050 Transposase IS66 family HC341_04230 PF00589 Phage integrase family HC341_04230 PF13495 Phage integrase, N-terminal SAM-like domain HC341_04260 PF01695 IstB-like ATP binding protein HC341_04265 PF00665 Integrase core domain HC341_04275 PF01381 Helix-turn-helix HC341_04300 PF13614 AAA domain HC341_04310 PF00850 Histone deacetylase domain HC341_04315 PF03060 Nitronate monooxygenase HC341_04335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HC341_04335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HC341_04345 PF01042 Endoribonuclease L-PSP HC341_04350 PF00665 Integrase core domain HC341_04350 PF13936 Helix-turn-helix domain HC341_04360 PF00528 Binding-protein-dependent transport system inner membrane component HC341_04365 PF00005 ABC transporter HC341_04375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_04375 PF00072 Response regulator receiver domain HC341_04375 PF13426 PAS domain HC341_04385 PF00561 alpha/beta hydrolase fold HC341_04400 PF02492 CobW/HypB/UreG, nucleotide-binding domain HC341_04400 PF07683 Cobalamin synthesis protein cobW C-terminal domain HC341_04405 PF01258 Prokaryotic dksA/traR C4-type zinc finger HC341_04470 PF02211 Nitrile hydratase beta subunit HC341_04475 PF02979 Nitrile hydratase, alpha chain HC341_04485 PF01425 Amidase HC341_04500 PF08386 TAP-like protein HC341_04500 PF00561 alpha/beta hydrolase fold HC341_04510 PF00440 Bacterial regulatory proteins, tetR family HC341_04535 PF00005 ABC transporter HC341_04540 PF00528 Binding-protein-dependent transport system inner membrane component HC341_04545 PF00497 Bacterial extracellular solute-binding proteins, family 3 HC341_04560 PF00717 Peptidase S24-like HC341_04560 PF01726 LexA DNA binding domain HC341_04565 PF04607 Region found in RelA / SpoT proteins HC341_04565 PF02824 TGS domain HC341_04565 PF13291 ACT domain HC341_04585 PF03918 Cytochrome C biogenesis protein HC341_04590 PF08534 Redoxin HC341_04595 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HC341_04595 PF01578 Cytochrome C assembly protein HC341_04600 PF03100 CcmE HC341_04610 PF01578 Cytochrome C assembly protein HC341_04615 PF03379 CcmB protein HC341_04620 PF00005 ABC transporter HC341_04625 PF08546 Ketopantoate reductase PanE/ApbA C terminal HC341_04625 PF02558 Ketopantoate reductase PanE/ApbA HC341_04630 PF00561 alpha/beta hydrolase fold HC341_04640 PF01810 LysE type translocator HC341_04645 PF00472 RF-1 domain HC341_04665 PF00990 Diguanylate cyclase, GGDEF domain HC341_04665 PF00563 EAL domain HC341_04665 PF03707 Bacterial signalling protein N terminal repeat HC341_04670 PF02576 RimP N-terminal domain HC341_04670 PF17384 RimP C-terminal SH3 domain HC341_04675 PF08529 NusA N-terminal domain HC341_04675 PF13184 NusA-like KH domain HC341_04680 PF00009 Elongation factor Tu GTP binding domain HC341_04680 PF11987 Translation-initiation factor 2 HC341_04680 PF04760 Translation initiation factor IF-2, N-terminal region HC341_04680 PF08364 Bacterial translation initiation factor IF-2 associated region HC341_04685 PF02033 Ribosome-binding factor A HC341_04690 PF16198 tRNA pseudouridylate synthase B C-terminal domain HC341_04690 PF01509 TruB family pseudouridylate synthase (N terminal domain) HC341_04690 PF09157 Pseudouridine synthase II TruB, C-terminal HC341_04695 PF00312 Ribosomal protein S15 HC341_04700 PF03725 3' exoribonuclease family, domain 2 HC341_04700 PF00575 S1 RNA binding domain HC341_04700 PF00013 KH domain HC341_04700 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HC341_04700 PF01138 3' exoribonuclease family, domain 1 HC341_04705 PF00313 'Cold-shock' DNA-binding domain HC341_04710 PF00561 alpha/beta hydrolase fold HC341_04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_04715 PF00512 His Kinase A (phospho-acceptor) domain HC341_04715 PF00989 PAS fold HC341_04715 PF16736 Single Cache-like HC341_04725 PF00072 Response regulator receiver domain HC341_04725 PF00486 Transcriptional regulatory protein, C terminal HC341_04730 PF00378 Enoyl-CoA hydratase/isomerase HC341_04735 PF17932 Tetracyclin repressor-like, C-terminal domain HC341_04735 PF00440 Bacterial regulatory proteins, tetR family HC341_04740 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_04740 PF00005 ABC transporter HC341_04745 PF02653 Branched-chain amino acid transport system / permease component HC341_04760 PF00005 ABC transporter HC341_04765 PF00501 AMP-binding enzyme HC341_04770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_04770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_04770 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_04795 PF00501 AMP-binding enzyme HC341_04795 PF13193 AMP-binding enzyme C-terminal domain HC341_04805 PF09339 IclR helix-turn-helix domain HC341_04810 PF00348 Polyprenyl synthetase HC341_04815 PF02609 Exonuclease VII small subunit HC341_04820 PF00986 DNA gyrase B subunit, carboxyl terminus HC341_04820 PF00204 DNA gyrase B HC341_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_04820 PF01751 Toprim domain HC341_04825 PF00521 DNA gyrase/topoisomerase IV, subunit A HC341_04825 PF03989 DNA gyrase C-terminal domain, beta-propeller HC341_04830 PF01435 Peptidase family M48 HC341_04835 PF13188 PAS domain HC341_04835 PF00563 EAL domain HC341_04835 PF00990 Diguanylate cyclase, GGDEF domain HC341_04835 PF03707 Bacterial signalling protein N terminal repeat HC341_04845 PF04055 Radical SAM superfamily HC341_04850 PF09285 Elongation factor P, C-terminal HC341_04850 PF08207 Elongation factor P (EF-P) KOW-like domain HC341_04850 PF01132 Elongation factor P (EF-P) OB domain HC341_04855 PF00152 tRNA synthetases class II (D, K and N) HC341_04860 PF04293 SpoVR like protein HC341_04865 PF04285 Protein of unknown function (DUF444) HC341_04870 PF06798 PrkA serine protein kinase C-terminal domain HC341_04870 PF08298 PrkA AAA domain HC341_04875 PF00533 BRCA1 C Terminus (BRCT) domain HC341_04875 PF01653 NAD-dependent DNA ligase adenylation domain HC341_04875 PF03120 NAD-dependent DNA ligase OB-fold domain HC341_04875 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HC341_04875 PF12826 Helix-hairpin-helix motif HC341_04885 PF01722 BolA-like protein HC341_04890 PF03795 YCII-related domain HC341_04895 PF01300 Telomere recombination HC341_04900 PF00579 tRNA synthetases class I (W and Y) HC341_04905 PF02616 Segregation and condensation protein ScpA HC341_04910 PF04079 Segregation and condensation complex subunit ScpB HC341_04915 PF01479 S4 domain HC341_04915 PF00849 RNA pseudouridylate synthase HC341_04935 PF00106 short chain dehydrogenase HC341_04945 PF13419 Haloacid dehalogenase-like hydrolase HC341_04955 PF01979 Amidohydrolase family HC341_04960 PF01008 Initiation factor 2 subunit family HC341_04975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HC341_04980 PF03989 DNA gyrase C-terminal domain, beta-propeller HC341_04980 PF00521 DNA gyrase/topoisomerase IV, subunit A HC341_04985 PF00266 Aminotransferase class-V HC341_04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HC341_04990 PF01842 ACT domain HC341_04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HC341_04995 PF00800 Prephenate dehydratase HC341_04995 PF01817 Chorismate mutase type II HC341_04995 PF01842 ACT domain HC341_05000 PF00155 Aminotransferase class I and II HC341_05005 PF01842 ACT domain HC341_05005 PF02153 Prephenate dehydrogenase HC341_05010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HC341_05015 PF02224 Cytidylate kinase HC341_05020 PF00575 S1 RNA binding domain HC341_05025 PF00216 Bacterial DNA-binding protein HC341_05035 PF18073 Rubredoxin metal binding domain HC341_05040 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HC341_05055 PF12849 PBP superfamily domain HC341_05060 PF00528 Binding-protein-dependent transport system inner membrane component HC341_05065 PF00528 Binding-protein-dependent transport system inner membrane component HC341_05070 PF00005 ABC transporter HC341_05075 PF01895 PhoU domain HC341_05090 PF11808 Phosphate regulon sensor protein PhoR HC341_05090 PF00512 His Kinase A (phospho-acceptor) domain HC341_05090 PF00989 PAS fold HC341_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_05095 PF00072 Response regulator receiver domain HC341_05095 PF00486 Transcriptional regulatory protein, C terminal HC341_05100 PF00528 Binding-protein-dependent transport system inner membrane component HC341_05105 PF00005 ABC transporter HC341_05115 PF13439 Glycosyltransferase Family 4 HC341_05125 PF00005 ABC transporter HC341_05125 PF08402 TOBE domain HC341_05140 PF08402 TOBE domain HC341_05140 PF00005 ABC transporter HC341_05150 PF00528 Binding-protein-dependent transport system inner membrane component HC341_05185 PF13193 AMP-binding enzyme C-terminal domain HC341_05185 PF00501 AMP-binding enzyme HC341_05190 PF02803 Thiolase, C-terminal domain HC341_05190 PF00108 Thiolase, N-terminal domain HC341_05195 PF00378 Enoyl-CoA hydratase/isomerase HC341_05195 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_05195 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_05205 PF13460 NAD(P)H-binding HC341_05215 PF00378 Enoyl-CoA hydratase/isomerase HC341_05220 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_05230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_05235 PF01553 Acyltransferase HC341_05240 PF00313 'Cold-shock' DNA-binding domain HC341_05245 PF00440 Bacterial regulatory proteins, tetR family HC341_05255 PF00175 Oxidoreductase NAD-binding domain HC341_05255 PF00970 Oxidoreductase FAD-binding domain HC341_05280 PF01425 Amidase HC341_05285 PF01323 DSBA-like thioredoxin domain HC341_05310 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain HC341_05310 PF09297 NADH pyrophosphatase zinc ribbon domain HC341_05310 PF00293 NUDIX domain HC341_05325 PF00892 EamA-like transporter family HC341_05335 PF01293 Phosphoenolpyruvate carboxykinase HC341_05360 PF02666 Phosphatidylserine decarboxylase HC341_05365 PF02630 SCO1/SenC HC341_05370 PF05175 Methyltransferase small domain HC341_05375 PF01264 Chorismate synthase HC341_05380 PF12832 MFS_1 like family HC341_05385 PF00330 Aconitase family (aconitate hydratase) HC341_05390 PF00694 Aconitase C-terminal domain HC341_05395 PF00180 Isocitrate/isopropylmalate dehydrogenase HC341_05400 PF02774 Semialdehyde dehydrogenase, dimerisation domain HC341_05400 PF01118 Semialdehyde dehydrogenase, NAD binding domain HC341_05410 PF01416 tRNA pseudouridine synthase HC341_05415 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HC341_05420 PF00291 Pyridoxal-phosphate dependent enzyme HC341_05425 PF00290 Tryptophan synthase alpha chain HC341_05430 PF17848 Acetyl-coA carboxylase zinc finger domain HC341_05430 PF01039 Carboxyl transferase domain HC341_05435 PF02875 Mur ligase family, glutamate ligase domain HC341_05435 PF08245 Mur ligase middle domain HC341_05445 PF02674 Colicin V production protein HC341_05450 PF00156 Phosphoribosyl transferase domain HC341_05455 PF01053 Cys/Met metabolism PLP-dependent enzyme HC341_05460 PF13660 Domain of unknown function (DUF4147) HC341_05460 PF05161 MOFRL family HC341_05475 PF08534 Redoxin HC341_05480 PF00795 Carbon-nitrogen hydrolase HC341_05480 PF00583 Acetyltransferase (GNAT) family HC341_05485 PF00484 Carbonic anhydrase HC341_05495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HC341_05515 PF00730 HhH-GPD superfamily base excision DNA repair protein HC341_05515 PF10576 Iron-sulfur binding domain of endonuclease III HC341_05515 PF00633 Helix-hairpin-helix motif HC341_05520 PF02508 Rnf-Nqr subunit, membrane protein HC341_05530 PF04205 FMN-binding domain HC341_05535 PF03116 NQR2, RnfD, RnfE family HC341_05540 PF10531 SLBB domain HC341_05540 PF13375 RnfC Barrel sandwich hybrid domain HC341_05540 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HC341_05540 PF12838 4Fe-4S dicluster domain HC341_05545 PF04060 Putative Fe-S cluster HC341_05555 PF02508 Rnf-Nqr subunit, membrane protein HC341_05560 PF01588 Putative tRNA binding domain HC341_05560 PF09334 tRNA synthetases class I (M) HC341_05565 PF02926 THUMP domain HC341_05565 PF01170 Putative RNA methylase family UPF0020 HC341_05565 PF10672 S-adenosylmethionine-dependent methyltransferase HC341_05580 PF00692 dUTPase HC341_05595 PF01590 GAF domain HC341_05595 PF00563 EAL domain HC341_05595 PF00360 Phytochrome region HC341_05595 PF00990 Diguanylate cyclase, GGDEF domain HC341_05610 PF00551 Formyl transferase HC341_05615 PF00586 AIR synthase related protein, N-terminal domain HC341_05615 PF02769 AIR synthase related protein, C-terminal domain HC341_05630 PF00308 Bacterial dnaA protein HC341_05640 PF03358 NADPH-dependent FMN reductase HC341_05645 PF03631 Virulence factor BrkB HC341_05650 PF00708 Acylphosphatase HC341_05655 PF00034 Cytochrome c HC341_05665 PF00990 Diguanylate cyclase, GGDEF domain HC341_05665 PF00072 Response regulator receiver domain HC341_05670 PF00158 Sigma-54 interaction domain HC341_05670 PF02954 Bacterial regulatory protein, Fis family HC341_05670 PF00072 Response regulator receiver domain HC341_05675 PF12804 MobA-like NTP transferase domain HC341_05705 PF00994 Probable molybdopterin binding domain HC341_05705 PF03454 MoeA C-terminal region (domain IV) HC341_05705 PF03453 MoeA N-terminal region (domain I and II) HC341_05745 PF01568 Molydopterin dinucleotide binding domain HC341_05745 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HC341_05745 PF00384 Molybdopterin oxidoreductase HC341_05750 PF13247 4Fe-4S dicluster domain HC341_05770 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HC341_05770 PF00561 alpha/beta hydrolase fold HC341_05775 PF13194 Domain of unknown function (DUF4010) HC341_05810 PF02424 ApbE family HC341_05815 PF00072 Response regulator receiver domain HC341_05815 PF00486 Transcriptional regulatory protein, C terminal HC341_05830 PF07694 5TMR of 5TMR-LYT HC341_05830 PF00990 Diguanylate cyclase, GGDEF domain HC341_05835 PF06226 Protein of unknown function (DUF1007) HC341_05860 PF13492 GAF domain HC341_05860 PF06580 Histidine kinase HC341_05860 PF07694 5TMR of 5TMR-LYT HC341_05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_05865 PF00072 Response regulator receiver domain HC341_05865 PF04397 LytTr DNA-binding domain HC341_05870 PF00202 Aminotransferase class-III HC341_05875 PF00155 Aminotransferase class I and II HC341_05880 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HC341_05910 PF13230 Glutamine amidotransferases class-II HC341_05920 PF08402 TOBE domain HC341_05920 PF00005 ABC transporter HC341_05925 PF00528 Binding-protein-dependent transport system inner membrane component HC341_05935 PF00361 Proton-conducting membrane transporter HC341_05940 PF00361 Proton-conducting membrane transporter HC341_05945 PF00361 Proton-conducting membrane transporter HC341_05960 PF03334 Na+/H+ antiporter subunit HC341_05975 PF01979 Amidohydrolase family HC341_05985 PF00571 CBS domain HC341_05985 PF01769 Divalent cation transporter HC341_05985 PF03448 MgtE intracellular N domain HC341_05990 PF10385 RNA polymerase beta subunit external 1 domain HC341_05990 PF04560 RNA polymerase Rpb2, domain 7 HC341_05990 PF00562 RNA polymerase Rpb2, domain 6 HC341_05990 PF04565 RNA polymerase Rpb2, domain 3 HC341_05990 PF04561 RNA polymerase Rpb2, domain 2 HC341_05990 PF04563 RNA polymerase beta subunit HC341_05995 PF12072 Domain of unknown function (DUF3552) HC341_05995 PF00013 KH domain HC341_05995 PF01966 HD domain HC341_06000 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HC341_06000 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HC341_06005 PF03334 Na+/H+ antiporter subunit HC341_06010 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HC341_06030 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HC341_06040 PF01791 DeoC/LacD family aldolase HC341_06090 PF01695 IstB-like ATP binding protein HC341_06095 PF01212 Beta-eliminating lyase HC341_06125 PF07690 Major Facilitator Superfamily HC341_06160 PF00561 alpha/beta hydrolase fold HC341_06180 PF01790 Prolipoprotein diacylglyceryl transferase HC341_06190 PF00529 HlyD membrane-fusion protein of T1SS HC341_06190 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HC341_06195 PF00005 ABC transporter HC341_06210 PF00403 Heavy-metal-associated domain HC341_06235 PF07732 Multicopper oxidase HC341_06235 PF07731 Multicopper oxidase HC341_06235 PF00394 Multicopper oxidase HC341_06275 PF01545 Cation efflux family HC341_06275 PF16916 Dimerisation domain of Zinc Transporter HC341_06295 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HC341_06295 PF00355 Rieske [2Fe-2S] domain HC341_06330 PF00491 Arginase family HC341_06335 PF00202 Aminotransferase class-III HC341_06340 PF00491 Arginase family HC341_06345 PF07687 Peptidase dimerisation domain HC341_06345 PF01546 Peptidase family M20/M25/M40 HC341_06355 PF00005 ABC transporter HC341_06360 PF00528 Binding-protein-dependent transport system inner membrane component HC341_06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_06375 PF03466 LysR substrate binding domain HC341_06380 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HC341_06385 PF01381 Helix-turn-helix HC341_06400 PF00589 Phage integrase family HC341_06400 PF02899 Phage integrase, N-terminal SAM-like domain HC341_06405 PF12728 Helix-turn-helix domain HC341_06440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_06440 PF08447 PAS fold HC341_06445 PF00990 Diguanylate cyclase, GGDEF domain HC341_06445 PF08448 PAS fold HC341_06445 PF08447 PAS fold HC341_06445 PF00563 EAL domain HC341_06450 PF00486 Transcriptional regulatory protein, C terminal HC341_06450 PF00072 Response regulator receiver domain HC341_06455 PF00072 Response regulator receiver domain HC341_06455 PF00990 Diguanylate cyclase, GGDEF domain HC341_06460 PF00672 HAMP domain HC341_06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_06460 PF00512 His Kinase A (phospho-acceptor) domain HC341_06460 PF13426 PAS domain HC341_06465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_06465 PF00512 His Kinase A (phospho-acceptor) domain HC341_06465 PF00989 PAS fold HC341_06465 PF00672 HAMP domain HC341_06480 PF13817 IS66 C-terminal element HC341_06480 PF13007 Transposase C of IS166 homeodomain HC341_06480 PF13005 zinc-finger binding domain of transposase IS66 HC341_06480 PF03050 Transposase IS66 family HC341_06500 PF07694 5TMR of 5TMR-LYT HC341_06500 PF00990 Diguanylate cyclase, GGDEF domain HC341_06515 PF01695 IstB-like ATP binding protein HC341_06520 PF05231 MASE1 HC341_06520 PF00990 Diguanylate cyclase, GGDEF domain HC341_06520 PF13426 PAS domain HC341_06520 PF00563 EAL domain HC341_06520 PF08448 PAS fold HC341_06520 PF08447 PAS fold HC341_06525 PF03971 Monomeric isocitrate dehydrogenase HC341_06530 PF04241 Protein of unknown function (DUF423) HC341_06535 PF13426 PAS domain HC341_06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_06535 PF00072 Response regulator receiver domain HC341_06565 PF01022 Bacterial regulatory protein, arsR family HC341_06570 PF01451 Low molecular weight phosphotyrosine protein phosphatase HC341_06575 PF01758 Sodium Bile acid symporter family HC341_06585 PF00582 Universal stress protein family HC341_06595 PF03358 NADPH-dependent FMN reductase HC341_06605 PF00108 Thiolase, N-terminal domain HC341_06605 PF02803 Thiolase, C-terminal domain HC341_06610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HC341_06625 PF12800 4Fe-4S binding domain HC341_06625 PF13247 4Fe-4S dicluster domain HC341_06630 PF01568 Molydopterin dinucleotide binding domain HC341_06630 PF00384 Molybdopterin oxidoreductase HC341_06630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HC341_06645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_06645 PF00512 His Kinase A (phospho-acceptor) domain HC341_06650 PF00158 Sigma-54 interaction domain HC341_06650 PF02954 Bacterial regulatory protein, Fis family HC341_06650 PF00072 Response regulator receiver domain HC341_06665 PF00528 Binding-protein-dependent transport system inner membrane component HC341_06670 PF00005 ABC transporter HC341_06675 PF12849 PBP superfamily domain HC341_06680 PF00267 Gram-negative porin HC341_06695 PF02417 Chromate transporter HC341_06700 PF00005 ABC transporter HC341_06700 PF08402 TOBE domain HC341_06705 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HC341_06705 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HC341_06710 PF00202 Aminotransferase class-III HC341_06715 PF00462 Glutaredoxin HC341_06720 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HC341_06720 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HC341_06725 PF00929 Exonuclease HC341_06730 PF01979 Amidohydrolase family HC341_06735 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_06750 PF08240 Alcohol dehydrogenase GroES-like domain HC341_06750 PF00107 Zinc-binding dehydrogenase HC341_06755 PF00764 Arginosuccinate synthase HC341_06760 PF00563 EAL domain HC341_06760 PF00990 Diguanylate cyclase, GGDEF domain HC341_06760 PF08448 PAS fold HC341_06780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_06780 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_06780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_06785 PF00108 Thiolase, N-terminal domain HC341_06785 PF02803 Thiolase, C-terminal domain HC341_06790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_06790 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_06790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_06795 PF00501 AMP-binding enzyme HC341_06795 PF13193 AMP-binding enzyme C-terminal domain HC341_06805 PF00561 alpha/beta hydrolase fold HC341_06810 PF12697 Alpha/beta hydrolase family HC341_06815 PF12146 Serine aminopeptidase, S33 HC341_06830 PF00850 Histone deacetylase domain HC341_06835 PF02082 Transcriptional regulator HC341_06840 PF01794 Ferric reductase like transmembrane component HC341_06845 PF00174 Oxidoreductase molybdopterin binding domain HC341_06850 PF03150 Di-haem cytochrome c peroxidase HC341_06850 PF00034 Cytochrome c HC341_06855 PF05140 ResB-like family HC341_06860 PF08669 Glycine cleavage T-protein C-terminal barrel domain HC341_06860 PF01571 Aminomethyltransferase folate-binding domain HC341_06875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HC341_06875 PF00361 Proton-conducting membrane transporter HC341_06875 PF13244 Domain of unknown function (DUF4040) HC341_06880 PF00361 Proton-conducting membrane transporter HC341_06895 PF03334 Na+/H+ antiporter subunit HC341_06915 PF02028 BCCT, betaine/carnitine/choline family transporter HC341_06920 PF00115 Cytochrome C and Quinol oxidase polypeptide I HC341_06935 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HC341_06935 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HC341_06945 PF12801 4Fe-4S binding domain HC341_06945 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HC341_06945 PF13746 4Fe-4S dicluster domain HC341_06955 PF00403 Heavy-metal-associated domain HC341_06960 PF00497 Bacterial extracellular solute-binding proteins, family 3 HC341_06965 PF00672 HAMP domain HC341_06965 PF07228 Stage II sporulation protein E (SpoIIE) HC341_06980 PF01590 GAF domain HC341_06980 PF00360 Phytochrome region HC341_06980 PF00990 Diguanylate cyclase, GGDEF domain HC341_06980 PF00563 EAL domain HC341_06985 PF03597 Cytochrome oxidase maturation protein cbb3-type HC341_07010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HC341_07020 PF05598 Transposase domain (DUF772) HC341_07020 PF01609 Transposase DDE domain HC341_07030 PF03441 FAD binding domain of DNA photolyase HC341_07030 PF00875 DNA photolyase HC341_07045 PF02785 Biotin carboxylase C-terminal domain HC341_07045 PF00289 Biotin carboxylase, N-terminal domain HC341_07045 PF00364 Biotin-requiring enzyme HC341_07045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HC341_07045 PF00682 HMGL-like HC341_07045 PF02436 Conserved carboxylase domain HC341_07090 PF03050 Transposase IS66 family HC341_07090 PF13005 zinc-finger binding domain of transposase IS66 HC341_07090 PF13007 Transposase C of IS166 homeodomain HC341_07090 PF13817 IS66 C-terminal element HC341_07095 PF00155 Aminotransferase class I and II HC341_07115 PF01527 Transposase HC341_07150 PF00149 Calcineurin-like phosphoesterase HC341_07155 PF00149 Calcineurin-like phosphoesterase HC341_07175 PF10127 RNA repair pathway DNA polymerase beta family HC341_07200 PF18273 Type III R-M EcoP15I C-terminal domain HC341_07200 PF01555 DNA methylase HC341_07210 PF08774 VRR-NUC domain HC341_07210 PF04851 Type III restriction enzyme, res subunit HC341_07220 PF01555 DNA methylase HC341_07220 PF18273 Type III R-M EcoP15I C-terminal domain HC341_07235 PF00149 Calcineurin-like phosphoesterase HC341_07245 PF00149 Calcineurin-like phosphoesterase HC341_07255 PF00149 Calcineurin-like phosphoesterase HC341_07345 PF00589 Phage integrase family HC341_07355 PF05598 Transposase domain (DUF772) HC341_07355 PF01609 Transposase DDE domain HC341_07370 PF08241 Methyltransferase domain HC341_07375 PF17946 RecC C-terminal domain HC341_07380 PF12705 PD-(D/E)XK nuclease superfamily HC341_07380 PF00580 UvrD/REP helicase N-terminal domain HC341_07380 PF13361 UvrD-like helicase C-terminal domain HC341_07385 PF13538 UvrD-like helicase C-terminal domain HC341_07400 PF09278 MerR, DNA binding HC341_07400 PF00376 MerR family regulatory protein HC341_07405 PF00403 Heavy-metal-associated domain HC341_07435 PF00155 Aminotransferase class I and II HC341_07440 PF17757 UvrB interaction domain HC341_07440 PF00271 Helicase conserved C-terminal domain HC341_07440 PF12344 Ultra-violet resistance protein B HC341_07440 PF02151 UvrB/uvrC motif HC341_07440 PF04851 Type III restriction enzyme, res subunit HC341_07445 PF13193 AMP-binding enzyme C-terminal domain HC341_07445 PF00501 AMP-binding enzyme HC341_07450 PF01070 FMN-dependent dehydrogenase HC341_07455 PF01047 MarR family HC341_07465 PF07690 Major Facilitator Superfamily HC341_07475 PF04273 Putative phosphatase (DUF442) HC341_07475 PF00753 Metallo-beta-lactamase superfamily HC341_07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_07500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HC341_07505 PF00561 alpha/beta hydrolase fold HC341_07515 PF00107 Zinc-binding dehydrogenase HC341_07515 PF08240 Alcohol dehydrogenase GroES-like domain HC341_07520 PF00005 ABC transporter HC341_07525 PF00005 ABC transporter HC341_07535 PF02653 Branched-chain amino acid transport system / permease component HC341_07550 PF02954 Bacterial regulatory protein, Fis family HC341_07550 PF00072 Response regulator receiver domain HC341_07550 PF00158 Sigma-54 interaction domain HC341_07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_07555 PF00512 His Kinase A (phospho-acceptor) domain HC341_07570 PF00144 Beta-lactamase HC341_07585 PF00563 EAL domain HC341_07585 PF00990 Diguanylate cyclase, GGDEF domain HC341_07585 PF03707 Bacterial signalling protein N terminal repeat HC341_07595 PF00158 Sigma-54 interaction domain HC341_07595 PF02954 Bacterial regulatory protein, Fis family HC341_07595 PF01590 GAF domain HC341_07600 PF00005 ABC transporter HC341_07615 PF18113 Rubredoxin binding C-terminal domain HC341_07615 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_07625 PF00581 Rhodanese-like domain HC341_07635 PF00005 ABC transporter HC341_07635 PF00664 ABC transporter transmembrane region HC341_07640 PF01171 PP-loop family HC341_07655 PF02547 Queuosine biosynthesis protein HC341_07660 PF01702 Queuine tRNA-ribosyltransferase HC341_07665 PF02699 Preprotein translocase subunit HC341_07670 PF07549 SecD/SecF GG Motif HC341_07670 PF02355 Protein export membrane protein HC341_07670 PF13721 SecD export protein N-terminal TM region HC341_07675 PF07549 SecD/SecF GG Motif HC341_07675 PF02355 Protein export membrane protein HC341_07685 PF03641 Possible lysine decarboxylase HC341_07695 PF00440 Bacterial regulatory proteins, tetR family HC341_07710 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HC341_07725 PF00459 Inositol monophosphatase family HC341_07730 PF00588 SpoU rRNA Methylase family HC341_07735 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_07740 PF00266 Aminotransferase class-V HC341_07750 PF01521 Iron-sulphur cluster biosynthesis HC341_07755 PF00334 Nucleoside diphosphate kinase HC341_07760 PF04055 Radical SAM superfamily HC341_07775 PF03129 Anticodon binding domain HC341_07775 PF13393 Histidyl-tRNA synthetase HC341_07780 PF09976 Tetratricopeptide repeat-like domain HC341_07785 PF13360 PQQ-like domain HC341_07800 PF05191 Adenylate kinase, active site lid HC341_07810 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HC341_07810 PF01243 Pyridoxamine 5'-phosphate oxidase HC341_07815 PF07690 Major Facilitator Superfamily HC341_07830 PF01061 ABC-2 type transporter HC341_07835 PF00005 ABC transporter HC341_07845 PF13409 Glutathione S-transferase, N-terminal domain HC341_07850 PF01476 LysM domain HC341_07850 PF01551 Peptidase family M23 HC341_07850 PF08525 Opacity-associated protein A N-terminal motif HC341_07855 PF02601 Exonuclease VII, large subunit HC341_07855 PF13742 OB-fold nucleic acid binding domain HC341_07860 PF00478 IMP dehydrogenase / GMP reductase domain HC341_07860 PF00571 CBS domain HC341_07865 PF02540 NAD synthase HC341_07865 PF00958 GMP synthase C terminal domain HC341_07865 PF00117 Glutamine amidotransferase class-I HC341_07870 PF14437 MafB19-like deaminase HC341_07875 PF00497 Bacterial extracellular solute-binding proteins, family 3 HC341_07875 PF01464 Transglycosylase SLT domain HC341_07890 PF01593 Flavin containing amine oxidoreductase HC341_07905 PF00005 ABC transporter HC341_07910 PF02492 CobW/HypB/UreG, nucleotide-binding domain HC341_07910 PF07683 Cobalamin synthesis protein cobW C-terminal domain HC341_07915 PF00378 Enoyl-CoA hydratase/isomerase HC341_07915 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_07915 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_07920 PF00108 Thiolase, N-terminal domain HC341_07920 PF02803 Thiolase, C-terminal domain HC341_07925 PF00392 Bacterial regulatory proteins, gntR family HC341_07925 PF07729 FCD domain HC341_07935 PF13426 PAS domain HC341_07935 PF01740 STAS domain HC341_07940 PF02560 Cyanate lyase C-terminal domain HC341_07945 PF00005 ABC transporter HC341_07950 PF00528 Binding-protein-dependent transport system inner membrane component HC341_07955 PF00005 ABC transporter HC341_07960 PF03861 ANTAR domain HC341_07960 PF08376 Nitrate and nitrite sensing HC341_07965 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HC341_07970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HC341_07975 PF02673 Bacitracin resistance protein BacA HC341_07985 PF00149 Calcineurin-like phosphoesterase HC341_08010 PF12833 Helix-turn-helix domain HC341_08010 PF02311 AraC-like ligand binding domain HC341_08020 PF13406 Transglycosylase SLT domain HC341_08035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_08040 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_08045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HC341_08060 PF12146 Serine aminopeptidase, S33 HC341_08070 PF01189 16S rRNA methyltransferase RsmB/F HC341_08070 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HC341_08070 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HC341_08080 PF01728 FtsJ-like methyltransferase HC341_08080 PF18125 RlmM ferredoxin-like domain HC341_08085 PF01145 SPFH domain / Band 7 family HC341_08085 PF16200 C-terminal region of band_7 HC341_08090 PF00589 Phage integrase family HC341_08090 PF02899 Phage integrase, N-terminal SAM-like domain HC341_08095 PF13098 Thioredoxin-like domain HC341_08095 PF10411 Disulfide bond isomerase protein N-terminus HC341_08100 PF00037 4Fe-4S binding domain HC341_08100 PF11953 Domain of unknown function (DUF3470) HC341_08105 PF05192 MutS domain III HC341_08105 PF05188 MutS domain II HC341_08105 PF01624 MutS domain I HC341_08105 PF05190 MutS family domain IV HC341_08105 PF00488 MutS domain V HC341_08110 PF02464 Competence-damaged protein HC341_08115 PF02834 LigT like Phosphoesterase HC341_08120 PF00154 recA bacterial DNA recombination protein HC341_08125 PF02631 RecX family HC341_08130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HC341_08130 PF02272 DHHA1 domain HC341_08130 PF01411 tRNA synthetases class II (A) HC341_08135 PF13840 ACT domain HC341_08135 PF01842 ACT domain HC341_08135 PF00696 Amino acid kinase family HC341_08140 PF02599 Global regulator protein family HC341_08165 PF00990 Diguanylate cyclase, GGDEF domain HC341_08170 PF10503 Esterase PHB depolymerase HC341_08175 PF12170 DNA polymerase III tau subunit V interacting with alpha HC341_08175 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HC341_08175 PF12169 DNA polymerase III subunits gamma and tau domain III HC341_08180 PF02575 YbaB/EbfC DNA-binding family HC341_08185 PF13662 Toprim domain HC341_08185 PF02132 RecR protein HC341_08190 PF03193 RsgA GTPase HC341_08195 PF00929 Exonuclease HC341_08200 PF00581 Rhodanese-like domain HC341_08205 PF02754 Cysteine-rich domain HC341_08205 PF13183 4Fe-4S dicluster domain HC341_08210 PF01565 FAD binding domain HC341_08215 PF01565 FAD binding domain HC341_08215 PF02913 FAD linked oxidases, C-terminal domain HC341_08220 PF00391 PEP-utilising enzyme, mobile domain HC341_08220 PF02896 PEP-utilising enzyme, TIM barrel domain HC341_08220 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HC341_08225 PF03618 Kinase/pyrophosphorylase HC341_08240 PF13559 Domain of unknown function (DUF4129) HC341_08240 PF11992 Domain of unknown function (DUF3488) HC341_08240 PF01841 Transglutaminase-like superfamily HC341_08250 PF07726 ATPase family associated with various cellular activities (AAA) HC341_08250 PF17863 AAA lid domain HC341_08255 PF00072 Response regulator receiver domain HC341_08260 PF01551 Peptidase family M23 HC341_08260 PF04225 Opacity-associated protein A LysM-like domain HC341_08270 PF18393 MotY N-terminal domain HC341_08270 PF00691 OmpA family HC341_08280 PF13188 PAS domain HC341_08280 PF03707 Bacterial signalling protein N terminal repeat HC341_08280 PF00990 Diguanylate cyclase, GGDEF domain HC341_08280 PF00563 EAL domain HC341_08290 PF08448 PAS fold HC341_08290 PF01739 CheR methyltransferase, SAM binding domain HC341_08290 PF01339 CheB methylesterase HC341_08290 PF03705 CheR methyltransferase, all-alpha domain HC341_08320 PF01668 SmpB protein HC341_08325 PF00209 Sodium:neurotransmitter symporter family HC341_08330 PF03364 Polyketide cyclase / dehydrase and lipid transport HC341_08335 PF03658 RnfH family Ubiquitin HC341_08340 PF04355 SmpA / OmlA family HC341_08345 PF01475 Ferric uptake regulator family HC341_08350 PF02463 RecF/RecN/SMC N terminal domain HC341_08355 PF01628 HrcA protein C terminal domain HC341_08355 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding HC341_08360 PF01025 GrpE HC341_08365 PF00012 Hsp70 protein HC341_08370 PF00226 DnaJ domain HC341_08370 PF00684 DnaJ central domain HC341_08370 PF01556 DnaJ C terminal domain HC341_08375 PF01113 Dihydrodipicolinate reductase, N-terminus HC341_08375 PF05173 Dihydrodipicolinate reductase, C-terminus HC341_08380 PF00892 EamA-like transporter family HC341_08385 PF00892 EamA-like transporter family HC341_08390 PF00892 EamA-like transporter family HC341_08395 PF00990 Diguanylate cyclase, GGDEF domain HC341_08395 PF05230 MASE2 domain HC341_08420 PF00176 SNF2 family N-terminal domain HC341_08420 PF00271 Helicase conserved C-terminal domain HC341_08440 PF12419 SNF2 Helicase protein HC341_08440 PF00271 Helicase conserved C-terminal domain HC341_08440 PF00176 SNF2 family N-terminal domain HC341_08455 PF03050 Transposase IS66 family HC341_08455 PF13817 IS66 C-terminal element HC341_08455 PF13005 zinc-finger binding domain of transposase IS66 HC341_08455 PF13007 Transposase C of IS166 homeodomain HC341_08460 PF05717 IS66 Orf2 like protein HC341_08480 PF13936 Helix-turn-helix domain HC341_08480 PF00665 Integrase core domain HC341_08495 PF01850 PIN domain HC341_08505 PF04471 Restriction endonuclease HC341_08505 PF14338 Mrr N-terminal domain HC341_08520 PF00535 Glycosyl transferase family 2 HC341_08530 PF01609 Transposase DDE domain HC341_08530 PF05598 Transposase domain (DUF772) HC341_08565 PF00665 Integrase core domain HC341_08570 PF01695 IstB-like ATP binding protein HC341_08580 PF01695 IstB-like ATP binding protein HC341_08585 PF01695 IstB-like ATP binding protein HC341_08610 PF08241 Methyltransferase domain HC341_08615 PF00085 Thioredoxin HC341_08620 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_08625 PF13230 Glutamine amidotransferases class-II HC341_08630 PF02627 Carboxymuconolactone decarboxylase family HC341_08635 PF07690 Major Facilitator Superfamily HC341_08645 PF00581 Rhodanese-like domain HC341_08650 PF00266 Aminotransferase class-V HC341_08655 PF04264 YceI-like domain HC341_08665 PF03707 Bacterial signalling protein N terminal repeat HC341_08665 PF00990 Diguanylate cyclase, GGDEF domain HC341_08665 PF00563 EAL domain HC341_08670 PF08447 PAS fold HC341_08670 PF13426 PAS domain HC341_08670 PF08448 PAS fold HC341_08670 PF05231 MASE1 HC341_08670 PF00990 Diguanylate cyclase, GGDEF domain HC341_08670 PF00563 EAL domain HC341_08675 PF00990 Diguanylate cyclase, GGDEF domain HC341_08675 PF08448 PAS fold HC341_08680 PF00990 Diguanylate cyclase, GGDEF domain HC341_08680 PF03707 Bacterial signalling protein N terminal repeat HC341_08680 PF00563 EAL domain HC341_08710 PF02586 SOS response associated peptidase (SRAP) HC341_08730 PF13193 AMP-binding enzyme C-terminal domain HC341_08730 PF00501 AMP-binding enzyme HC341_08735 PF00465 Iron-containing alcohol dehydrogenase HC341_08745 PF02586 SOS response associated peptidase (SRAP) HC341_08800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HC341_08800 PF01411 tRNA synthetases class II (A) HC341_08800 PF02272 DHHA1 domain HC341_08805 PF00248 Aldo/keto reductase family HC341_08810 PF13438 Domain of unknown function (DUF4113) HC341_08810 PF11799 impB/mucB/samB family C-terminal domain HC341_08810 PF00817 impB/mucB/samB family HC341_08830 PF00487 Fatty acid desaturase HC341_08845 PF04820 Tryptophan halogenase HC341_08860 PF00501 AMP-binding enzyme HC341_08860 PF13193 AMP-binding enzyme C-terminal domain HC341_08865 PF00072 Response regulator receiver domain HC341_08865 PF00990 Diguanylate cyclase, GGDEF domain HC341_08885 PF01618 MotA/TolQ/ExbB proton channel family HC341_08890 PF00691 OmpA family HC341_08890 PF13677 Membrane MotB of proton-channel complex MotA/MotB HC341_08900 PF06969 HemN C-terminal domain HC341_08900 PF04055 Radical SAM superfamily HC341_08905 PF04304 Protein of unknown function (DUF454) HC341_08910 PF14760 Rnk N-terminus HC341_08910 PF01272 Transcription elongation factor, GreA/GreB, C-term HC341_08925 PF00990 Diguanylate cyclase, GGDEF domain HC341_08935 PF00141 Peroxidase HC341_08940 PF15887 Putative zinc-binding metallo-peptidase HC341_08940 PF10005 zinc-ribbon domain HC341_08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_08945 PF03466 LysR substrate binding domain HC341_08965 PF00497 Bacterial extracellular solute-binding proteins, family 3 HC341_08965 PF01464 Transglycosylase SLT domain HC341_08975 PF00939 Sodium:sulfate symporter transmembrane region HC341_08980 PF00175 Oxidoreductase NAD-binding domain HC341_08980 PF00970 Oxidoreductase FAD-binding domain HC341_08980 PF00111 2Fe-2S iron-sulfur cluster binding domain HC341_09005 PF00501 AMP-binding enzyme HC341_09005 PF13193 AMP-binding enzyme C-terminal domain HC341_09010 PF00850 Histone deacetylase domain HC341_09015 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HC341_09025 PF11953 Domain of unknown function (DUF3470) HC341_09025 PF00037 4Fe-4S binding domain HC341_09035 PF02082 Transcriptional regulator HC341_09040 PF00929 Exonuclease HC341_09060 PF00474 Sodium:solute symporter family HC341_09085 PF00563 EAL domain HC341_09085 PF13188 PAS domain HC341_09085 PF03707 Bacterial signalling protein N terminal repeat HC341_09085 PF00990 Diguanylate cyclase, GGDEF domain HC341_09090 PF00106 short chain dehydrogenase HC341_09095 PF07690 Major Facilitator Superfamily HC341_09105 PF00561 alpha/beta hydrolase fold HC341_09110 PF07995 Glucose / Sorbosone dehydrogenase HC341_09115 PF02554 Carbon starvation protein CstA HC341_09115 PF13722 5TM C-terminal transporter carbon starvation CstA HC341_09125 PF02374 Anion-transporting ATPase HC341_09130 PF00106 short chain dehydrogenase HC341_09135 PF01594 AI-2E family transporter HC341_09140 PF14497 Glutathione S-transferase, C-terminal domain HC341_09140 PF13417 Glutathione S-transferase, N-terminal domain HC341_09145 PF00849 RNA pseudouridylate synthase HC341_09150 PF00563 EAL domain HC341_09150 PF00990 Diguanylate cyclase, GGDEF domain HC341_09150 PF03707 Bacterial signalling protein N terminal repeat HC341_09160 PF00005 ABC transporter HC341_09160 PF00664 ABC transporter transmembrane region HC341_09185 PF03006 Haemolysin-III related HC341_09195 PF01894 Uncharacterised protein family UPF0047 HC341_09200 PF17070 30S ribosomal protein Thx HC341_09215 PF03358 NADPH-dependent FMN reductase HC341_09220 PF01047 MarR family HC341_09225 PF09350 Domain of unknown function (DUF1992) HC341_09235 PF02146 Sir2 family HC341_09240 PF04055 Radical SAM superfamily HC341_09245 PF01546 Peptidase family M20/M25/M40 HC341_09245 PF07687 Peptidase dimerisation domain HC341_09250 PF03992 Antibiotic biosynthesis monooxygenase HC341_09255 PF17284 Spermidine synthase tetramerisation domain HC341_09260 PF00005 ABC transporter HC341_09260 PF00664 ABC transporter transmembrane region HC341_09265 PF00005 ABC transporter HC341_09265 PF00664 ABC transporter transmembrane region HC341_09270 PF02322 Cytochrome bd terminal oxidase subunit II HC341_09275 PF01654 Cytochrome bd terminal oxidase subunit I HC341_09285 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding HC341_09285 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_09285 PF10518 TAT (twin-arginine translocation) pathway signal sequence HC341_09290 PF00578 AhpC/TSA family HC341_09295 PF02322 Cytochrome bd terminal oxidase subunit II HC341_09300 PF01654 Cytochrome bd terminal oxidase subunit I HC341_09310 PF00004 ATPase family associated with various cellular activities (AAA) HC341_09310 PF01434 Peptidase family M41 HC341_09310 PF17862 AAA+ lid domain HC341_09335 PF12300 ATP-dependent RNA helicase RhlB HC341_09335 PF00271 Helicase conserved C-terminal domain HC341_09335 PF00270 DEAD/DEAH box helicase HC341_09350 PF01048 Phosphorylase superfamily HC341_09360 PF01966 HD domain HC341_09360 PF11871 Domain of unknown function (DUF3391) HC341_09365 PF04102 SlyX HC341_09370 PF12848 ABC transporter HC341_09370 PF00005 ABC transporter HC341_09375 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_09375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HC341_09385 PF00270 DEAD/DEAH box helicase HC341_09385 PF00271 Helicase conserved C-terminal domain HC341_09385 PF00570 HRDC domain HC341_09385 PF16124 RecQ zinc-binding HC341_09385 PF09382 RQC domain HC341_09400 PF00005 ABC transporter HC341_09405 PF02405 Permease MlaE HC341_09410 PF02811 PHP domain HC341_09420 PF00672 HAMP domain HC341_09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_09470 PF01964 Radical SAM ThiC family HC341_09470 PF13667 ThiC-associated domain HC341_09475 PF02652 L-lactate permease HC341_09485 PF13183 4Fe-4S dicluster domain HC341_09485 PF02589 LUD domain HC341_09485 PF11870 Domain of unknown function (DUF3390) HC341_09490 PF02754 Cysteine-rich domain HC341_09495 PF01329 Pterin 4 alpha carbinolamine dehydratase HC341_09500 PF02503 Polyphosphate kinase middle domain HC341_09500 PF13089 Polyphosphate kinase N-terminal domain HC341_09500 PF17941 Polyphosphate kinase C-terminal domain 1 HC341_09500 PF13090 Polyphosphate kinase C-terminal domain 2 HC341_09530 PF00330 Aconitase family (aconitate hydratase) HC341_09530 PF00694 Aconitase C-terminal domain HC341_09535 PF04356 Protein of unknown function (DUF489) HC341_09545 PF00293 NUDIX domain HC341_09550 PF03466 LysR substrate binding domain HC341_09550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_09555 PF00463 Isocitrate lyase family HC341_09560 PF02617 ATP-dependent Clp protease adaptor protein ClpS HC341_09565 PF02861 Clp amino terminal domain, pathogenicity island component HC341_09565 PF17871 AAA lid domain HC341_09565 PF07724 AAA domain (Cdc48 subfamily) HC341_09565 PF10431 C-terminal, D2-small domain, of ClpB protein HC341_09565 PF00004 ATPase family associated with various cellular activities (AAA) HC341_09570 PF01176 Translation initiation factor 1A / IF-1 HC341_09575 PF04377 Arginine-tRNA-protein transferase, C terminus HC341_09575 PF04376 Arginine-tRNA-protein transferase, N terminus HC341_09580 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HC341_09590 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HC341_09590 PF09397 Ftsk gamma domain HC341_09590 PF17854 FtsK alpha domain HC341_09590 PF01580 FtsK/SpoIIIE family HC341_09595 PF03548 Outer membrane lipoprotein carrier protein LolA HC341_09600 PF12002 MgsA AAA+ ATPase C terminal HC341_09600 PF16193 AAA C-terminal domain HC341_09600 PF00004 ATPase family associated with various cellular activities (AAA) HC341_09605 PF02403 Seryl-tRNA synthetase N-terminal domain HC341_09605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HC341_09610 PF03466 LysR substrate binding domain HC341_09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_09615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_09615 PF14824 Sirohaem biosynthesis protein central HC341_09615 PF10414 Sirohaem synthase dimerisation region HC341_09620 PF01027 Inhibitor of apoptosis-promoting Bax1 HC341_09625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_09625 PF18158 Adaptive response protein AidB N-terminal domain HC341_09625 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_09630 PF03707 Bacterial signalling protein N terminal repeat HC341_09630 PF00563 EAL domain HC341_09630 PF00990 Diguanylate cyclase, GGDEF domain HC341_09650 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HC341_09650 PF04408 Helicase associated domain (HA2) HC341_09650 PF00271 Helicase conserved C-terminal domain HC341_09650 PF00270 DEAD/DEAH box helicase HC341_09650 PF11898 Domain of unknown function (DUF3418) HC341_09660 PF01336 OB-fold nucleic acid binding domain HC341_09660 PF00152 tRNA synthetases class II (D, K and N) HC341_09665 PF01571 Aminomethyltransferase folate-binding domain HC341_09675 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HC341_09680 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HC341_09685 PF00890 FAD binding domain HC341_09685 PF02910 Fumarate reductase flavoprotein C-term HC341_09690 PF13085 2Fe-2S iron-sulfur cluster binding domain HC341_09690 PF13237 4Fe-4S dicluster domain HC341_09695 PF03937 Flavinator of succinate dehydrogenase HC341_09705 PF00890 FAD binding domain HC341_09705 PF02910 Fumarate reductase flavoprotein C-term HC341_09710 PF08281 Sigma-70, region 4 HC341_09710 PF04542 Sigma-70 region 2 HC341_09725 PF13180 PDZ domain HC341_09725 PF17820 PDZ domain HC341_09730 PF03144 Elongation factor Tu domain 2 HC341_09730 PF14492 Elongation Factor G, domain II HC341_09730 PF00009 Elongation factor Tu GTP binding domain HC341_09730 PF00679 Elongation factor G C-terminus HC341_09730 PF06421 GTP-binding protein LepA C-terminus HC341_09735 PF10502 Signal peptidase, peptidase S26 HC341_09745 PF00035 Double-stranded RNA binding motif HC341_09745 PF14622 Ribonuclease-III-like HC341_09750 PF01926 50S ribosome-binding GTPase HC341_09750 PF07650 KH domain HC341_09755 PF02565 Recombination protein O C terminal HC341_09755 PF11967 Recombination protein O N terminal HC341_09760 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HC341_09765 PF01648 4'-phosphopantetheinyl transferase superfamily HC341_09770 PF00512 His Kinase A (phospho-acceptor) domain HC341_09770 PF01627 Hpt domain HC341_09770 PF00072 Response regulator receiver domain HC341_09770 PF00672 HAMP domain HC341_09770 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HC341_09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_09775 PF00291 Pyridoxal-phosphate dependent enzyme HC341_09785 PF05958 tRNA (Uracil-5-)-methyltransferase HC341_09790 PF00293 NUDIX domain HC341_09805 PF08328 Adenylosuccinate lyase C-terminal HC341_09805 PF00206 Lyase HC341_09810 PF00206 Lyase HC341_09810 PF10415 Fumarase C C-terminus HC341_09820 PF00072 Response regulator receiver domain HC341_09820 PF00196 Bacterial regulatory proteins, luxR family HC341_09825 PF03167 Uracil DNA glycosylase superfamily HC341_09830 PF01541 GIY-YIG catalytic domain HC341_09830 PF02151 UvrB/uvrC motif HC341_09830 PF08459 UvrC Helix-hairpin-helix N-terminal HC341_09835 PF01066 CDP-alcohol phosphatidyltransferase HC341_09860 PF02887 Pyruvate kinase, alpha/beta domain HC341_09860 PF00224 Pyruvate kinase, barrel domain HC341_09865 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_09865 PF00005 ABC transporter HC341_09870 PF00005 ABC transporter HC341_09875 PF02653 Branched-chain amino acid transport system / permease component HC341_09880 PF11862 Domain of unknown function (DUF3382) HC341_09880 PF02653 Branched-chain amino acid transport system / permease component HC341_09885 PF13458 Periplasmic binding protein HC341_09890 PF00209 Sodium:neurotransmitter symporter family HC341_09900 PF00069 Protein kinase domain HC341_09905 PF02817 e3 binding domain HC341_09905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HC341_09905 PF00364 Biotin-requiring enzyme HC341_09910 PF02779 Transketolase, pyrimidine binding domain HC341_09910 PF02780 Transketolase, C-terminal domain HC341_09915 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal HC341_09915 PF00676 Dehydrogenase E1 component HC341_09920 PF00266 Aminotransferase class-V HC341_09925 PF01026 TatD related DNase HC341_09935 PF09115 DNA polymerase III, delta subunit, C terminal HC341_09940 PF02223 Thymidylate kinase HC341_09945 PF02618 YceG-like family HC341_09950 PF01063 Amino-transferase class IV HC341_09955 PF00109 Beta-ketoacyl synthase, N-terminal domain HC341_09955 PF02801 Beta-ketoacyl synthase, C-terminal domain HC341_09960 PF00550 Phosphopantetheine attachment site HC341_09970 PF00698 Acyl transferase domain HC341_09975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HC341_09975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HC341_09980 PF02504 Fatty acid synthesis protein HC341_09985 PF01783 Ribosomal L32p protein family HC341_09990 PF02620 Large ribosomal RNA subunit accumulation protein YceD HC341_09995 PF02545 Maf-like protein HC341_10000 PF06965 Na+/H+ antiporter 1 HC341_10000 PF01343 Peptidase family S49 HC341_10005 PF00849 RNA pseudouridylate synthase HC341_10005 PF01479 S4 domain HC341_10010 PF00575 S1 RNA binding domain HC341_10010 PF10150 Ribonuclease E/G family HC341_10010 PF12111 Polyribonucleotide phosphorylase C terminal HC341_10015 PF01451 Low molecular weight phosphotyrosine protein phosphatase HC341_10020 PF02348 Cytidylyltransferase HC341_10025 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HC341_10030 PF02472 Biopolymer transport protein ExbD/TolR HC341_10035 PF01618 MotA/TolQ/ExbB proton channel family HC341_10040 PF03772 Competence protein HC341_10040 PF00753 Metallo-beta-lactamase superfamily HC341_10040 PF13567 Domain of unknown function (DUF4131) HC341_10050 PF00005 ABC transporter HC341_10055 PF12704 MacB-like periplasmic core domain HC341_10055 PF02687 FtsX-like permease family HC341_10060 PF03749 Sugar fermentation stimulation protein RE domain HC341_10060 PF17746 SfsA N-terminal OB domain HC341_10065 PF04371 Porphyromonas-type peptidyl-arginine deiminase HC341_10070 PF00795 Carbon-nitrogen hydrolase HC341_10075 PF00793 DAHP synthetase I family HC341_10080 PF00270 DEAD/DEAH box helicase HC341_10080 PF00271 Helicase conserved C-terminal domain HC341_10080 PF03461 TRCF domain HC341_10080 PF17757 UvrB interaction domain HC341_10080 PF02559 CarD-like/TRCF domain HC341_10095 PF03819 MazG nucleotide pyrophosphohydrolase domain HC341_10100 PF17934 Tetracyclin repressor-like, C-terminal domain HC341_10100 PF00440 Bacterial regulatory proteins, tetR family HC341_10110 PF04551 GcpE protein HC341_10115 PF02581 Thiamine monophosphate synthase HC341_10115 PF08543 Phosphomethylpyrimidine kinase HC341_10120 PF00501 AMP-binding enzyme HC341_10120 PF13193 AMP-binding enzyme C-terminal domain HC341_10125 PF01026 TatD related DNase HC341_10130 PF01207 Dihydrouridine synthase (Dus) HC341_10150 PF17969 L,D-transpeptidase C-terminal domain HC341_10150 PF03734 L,D-transpeptidase catalytic domain HC341_10150 PF01476 LysM domain HC341_10155 PF01557 Fumarylacetoacetate (FAA) hydrolase family HC341_10160 PF00293 NUDIX domain HC341_10190 PF01180 Dihydroorotate dehydrogenase HC341_10195 PF10609 NUBPL iron-transfer P-loop NTPase HC341_10195 PF01883 Iron-sulfur cluster assembly protein HC341_10215 PF00114 Pilin (bacterial filament) HC341_10215 PF07963 Prokaryotic N-terminal methylation motif HC341_10225 PF00482 Type II secretion system (T2SS), protein F HC341_10230 PF00437 Type II/IV secretion system protein HC341_10240 PF13401 AAA domain HC341_10240 PF01471 Putative peptidoglycan binding domain HC341_10245 PF03958 Bacterial type II/III secretion system short domain HC341_10245 PF00263 Bacterial type II and III secretion system protein HC341_10275 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HC341_10275 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HC341_10285 PF12697 Alpha/beta hydrolase family HC341_10295 PF11940 Domain of unknown function (DUF3458) Ig-like fold HC341_10295 PF01433 Peptidase family M1 domain HC341_10295 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HC341_10300 PF17804 Tail specific protease N-terminal domain HC341_10300 PF03572 Peptidase family S41 HC341_10300 PF11818 C-terminal domain of tail specific protease (DUF3340) HC341_10300 PF00595 PDZ domain HC341_10305 PF00990 Diguanylate cyclase, GGDEF domain HC341_10305 PF08448 PAS fold HC341_10305 PF00563 EAL domain HC341_10310 PF17768 RecJ OB domain HC341_10310 PF02272 DHHA1 domain HC341_10310 PF01368 DHH family HC341_10320 PF00291 Pyridoxal-phosphate dependent enzyme HC341_10325 PF01842 ACT domain HC341_10325 PF00742 Homoserine dehydrogenase HC341_10325 PF03447 Homoserine dehydrogenase, NAD binding domain HC341_10330 PF00155 Aminotransferase class I and II HC341_10340 PF04545 Sigma-70, region 4 HC341_10340 PF04542 Sigma-70 region 2 HC341_10340 PF00140 Sigma-70 factor, region 1.2 HC341_10340 PF04539 Sigma-70 region 3 HC341_10345 PF01551 Peptidase family M23 HC341_10345 PF01476 LysM domain HC341_10350 PF09335 SNARE associated Golgi protein HC341_10360 PF01975 Survival protein SurE HC341_10365 PF01713 Smr domain HC341_10370 PF01142 tRNA pseudouridine synthase D (TruD) HC341_10375 PF02542 YgbB family HC341_10380 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HC341_10385 PF04977 Septum formation initiator HC341_10390 PF00113 Enolase, C-terminal TIM barrel domain HC341_10390 PF03952 Enolase, N-terminal domain HC341_10395 PF00793 DAHP synthetase I family HC341_10400 PF06418 CTP synthase N-terminus HC341_10400 PF00117 Glutamine amidotransferase class-I HC341_10405 PF09179 TilS substrate binding domain HC341_10405 PF11734 TilS substrate C-terminal domain HC341_10405 PF01171 PP-loop family HC341_10410 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HC341_10415 PF01336 OB-fold nucleic acid binding domain HC341_10415 PF07733 Bacterial DNA polymerase III alpha NTPase domain HC341_10415 PF02811 PHP domain HC341_10415 PF14579 Helix-hairpin-helix motif HC341_10415 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HC341_10420 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_10420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HC341_10425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HC341_10425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HC341_10430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HC341_10435 PF01351 Ribonuclease HII HC341_10440 PF02684 Lipid-A-disaccharide synthetase HC341_10445 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HC341_10445 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_10450 PF07977 FabA-like domain HC341_10455 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_10455 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HC341_10465 PF07244 Surface antigen variable number repeat HC341_10465 PF01103 Surface antigen HC341_10470 PF17820 PDZ domain HC341_10470 PF13180 PDZ domain HC341_10470 PF02163 Peptidase family M50 HC341_10475 PF13288 DXP reductoisomerase C-terminal domain HC341_10475 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HC341_10475 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HC341_10485 PF01255 Putative undecaprenyl diphosphate synthase HC341_10490 PF01765 Ribosome recycling factor HC341_10495 PF00696 Amino acid kinase family HC341_10500 PF00889 Elongation factor TS HC341_10505 PF00318 Ribosomal protein S2 HC341_10510 PF00557 Metallopeptidase family M24 HC341_10515 PF08335 GlnD PII-uridylyltransferase HC341_10515 PF01842 ACT domain HC341_10515 PF01909 Nucleotidyltransferase domain HC341_10515 PF01966 HD domain HC341_10520 PF00155 Aminotransferase class I and II HC341_10525 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal HC341_10525 PF14602 Hexapeptide repeat of succinyl-transferase HC341_10525 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_10530 PF03960 ArsC family HC341_10535 PF01546 Peptidase family M20/M25/M40 HC341_10535 PF07687 Peptidase dimerisation domain HC341_10545 PF00296 Luciferase-like monooxygenase HC341_10550 PF04143 Sulphur transport HC341_10565 PF00107 Zinc-binding dehydrogenase HC341_10565 PF08240 Alcohol dehydrogenase GroES-like domain HC341_10570 PF08351 Domain of unknown function (DUF1726) HC341_10570 PF13718 GNAT acetyltransferase 2 HC341_10570 PF05127 Helicase HC341_10570 PF17176 tRNA-binding domain HC341_10575 PF03692 Putative zinc- or iron-chelating domain HC341_10585 PF18389 TrmO C-terminal domain HC341_10585 PF01980 tRNA-methyltransferase O HC341_10590 PF00580 UvrD/REP helicase N-terminal domain HC341_10590 PF13361 UvrD-like helicase C-terminal domain HC341_10600 PF00270 DEAD/DEAH box helicase HC341_10600 PF09369 Domain of unknown function (DUF1998) HC341_10600 PF00271 Helicase conserved C-terminal domain HC341_10605 PF01726 LexA DNA binding domain HC341_10605 PF00717 Peptidase S24-like HC341_10610 PF01274 Malate synthase HC341_10620 PF03205 Molybdopterin guanine dinucleotide synthesis protein B HC341_10630 PF00027 Cyclic nucleotide-binding domain HC341_10630 PF00325 Bacterial regulatory proteins, crp family HC341_10635 PF01136 Peptidase family U32 HC341_10640 PF01136 Peptidase family U32 HC341_10645 PF02036 SCP-2 sterol transfer family HC341_10660 PF12697 Alpha/beta hydrolase family HC341_10665 PF01053 Cys/Met metabolism PLP-dependent enzyme HC341_10670 PF01740 STAS domain HC341_10670 PF00916 Sulfate permease family HC341_10680 PF04143 Sulphur transport HC341_10685 PF00873 AcrB/AcrD/AcrF family HC341_10695 PF02028 BCCT, betaine/carnitine/choline family transporter HC341_10705 PF00929 Exonuclease HC341_10715 PF00582 Universal stress protein family HC341_10720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_10720 PF02743 Cache domain HC341_10720 PF00672 HAMP domain HC341_10725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_10725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_10725 PF00378 Enoyl-CoA hydratase/isomerase HC341_10730 PF08745 PINc domain ribonuclease HC341_10740 PF16916 Dimerisation domain of Zinc Transporter HC341_10740 PF01545 Cation efflux family HC341_10750 PF03435 Saccharopine dehydrogenase NADP binding domain HC341_10765 PF01844 HNH endonuclease HC341_10780 PF00582 Universal stress protein family HC341_10805 PF00563 EAL domain HC341_10805 PF00990 Diguanylate cyclase, GGDEF domain HC341_10805 PF03707 Bacterial signalling protein N terminal repeat HC341_10825 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_10825 PF14759 Reductase C-terminal HC341_10830 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain HC341_10830 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 HC341_10835 PF13247 4Fe-4S dicluster domain HC341_10850 PF13614 AAA domain HC341_10860 PF07194 P2 response regulator binding domain HC341_10860 PF01627 Hpt domain HC341_10860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_10860 PF02895 Signal transducing histidine kinase, homodimeric domain HC341_10860 PF01584 CheW-like domain HC341_10865 PF00072 Response regulator receiver domain HC341_10870 PF01739 CheR methyltransferase, SAM binding domain HC341_10870 PF03705 CheR methyltransferase, all-alpha domain HC341_10880 PF00072 Response regulator receiver domain HC341_10880 PF01339 CheB methylesterase HC341_10885 PF01584 CheW-like domain HC341_10890 PF00672 HAMP domain HC341_10890 PF17202 Single cache domain 3 HC341_10890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_10895 PF08448 PAS fold HC341_10895 PF03705 CheR methyltransferase, all-alpha domain HC341_10895 PF01739 CheR methyltransferase, SAM binding domain HC341_10895 PF01339 CheB methylesterase HC341_10900 PF08448 PAS fold HC341_10900 PF00990 Diguanylate cyclase, GGDEF domain HC341_10900 PF00563 EAL domain HC341_10905 PF00486 Transcriptional regulatory protein, C terminal HC341_10905 PF00072 Response regulator receiver domain HC341_10910 PF13466 STAS domain HC341_10915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_10920 PF00072 Response regulator receiver domain HC341_10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_10925 PF00512 His Kinase A (phospho-acceptor) domain HC341_10925 PF01627 Hpt domain HC341_10925 PF00072 Response regulator receiver domain HC341_10935 PF05036 Sporulation related domain HC341_10940 PF08448 PAS fold HC341_10940 PF00990 Diguanylate cyclase, GGDEF domain HC341_10960 PF01584 CheW-like domain HC341_10970 PF13614 AAA domain HC341_10975 PF00072 Response regulator receiver domain HC341_10975 PF01339 CheB methylesterase HC341_10980 PF01584 CheW-like domain HC341_10980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_10980 PF01627 Hpt domain HC341_10980 PF00072 Response regulator receiver domain HC341_10980 PF02895 Signal transducing histidine kinase, homodimeric domain HC341_10985 PF04344 Chemotaxis phosphatase, CheZ HC341_10990 PF00072 Response regulator receiver domain HC341_10995 PF04545 Sigma-70, region 4 HC341_10995 PF04542 Sigma-70 region 2 HC341_10995 PF04539 Sigma-70 region 3 HC341_11000 PF10609 NUBPL iron-transfer P-loop NTPase HC341_11005 PF00448 SRP54-type protein, GTPase domain HC341_11010 PF00771 FHIPEP family HC341_11015 PF01312 FlhB HrpN YscU SpaS Family HC341_11020 PF01311 Bacterial export proteins, family 1 HC341_11025 PF01313 Bacterial export proteins, family 3 HC341_11030 PF00813 FliP family HC341_11035 PF04347 Flagellar biosynthesis protein, FliO HC341_11040 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HC341_11045 PF02154 Flagellar motor switch protein FliM HC341_11045 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HC341_11070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HC341_11070 PF18269 T3SS EscN ATPase C-terminal domain HC341_11080 PF14842 FliG N-terminal domain HC341_11080 PF14841 FliG middle domain HC341_11080 PF01706 FliG C-terminal domain HC341_11085 PF01514 Secretory protein of YscJ/FliF family HC341_11085 PF08345 Flagellar M-ring protein C-terminal HC341_11090 PF02049 Flagellar hook-basal body complex protein FliE HC341_11095 PF00158 Sigma-54 interaction domain HC341_11095 PF02954 Bacterial regulatory protein, Fis family HC341_11095 PF00072 Response regulator receiver domain HC341_11100 PF02954 Bacterial regulatory protein, Fis family HC341_11100 PF06490 Flagellar regulatory protein FleQ HC341_11100 PF00158 Sigma-54 interaction domain HC341_11120 PF02561 Flagellar protein FliS HC341_11125 PF02465 Flagellar hook-associated protein 2 N-terminus HC341_11125 PF07195 Flagellar hook-associated protein 2 C-terminus HC341_11125 PF07196 Flagellin hook IN motif HC341_11135 PF00669 Bacterial flagellin N-terminal helical region HC341_11135 PF08884 Flagellin D3 domain HC341_11135 PF00700 Bacterial flagellin C-terminal helical region HC341_11145 PF03707 Bacterial signalling protein N terminal repeat HC341_11145 PF00563 EAL domain HC341_11145 PF00990 Diguanylate cyclase, GGDEF domain HC341_11150 PF02541 Ppx/GppA phosphatase family HC341_11155 PF00300 Histidine phosphatase superfamily (branch 1) HC341_11170 PF04357 TamB, inner membrane protein subunit of TAM complex HC341_11175 PF01103 Surface antigen HC341_11175 PF07244 Surface antigen variable number repeat HC341_11175 PF17243 POTRA domain TamA domain 1 HC341_11180 PF01636 Phosphotransferase enzyme family HC341_11185 PF00933 Glycosyl hydrolase family 3 N terminal domain HC341_11195 PF01928 CYTH domain HC341_11205 PF00300 Histidine phosphatase superfamily (branch 1) HC341_11230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system HC341_11235 PF00528 Binding-protein-dependent transport system inner membrane component HC341_11240 PF00005 ABC transporter HC341_11240 PF00571 CBS domain HC341_11250 PF06295 Protein of unknown function (DUF1043) HC341_11280 PF01967 MoaC family HC341_11290 PF00483 Nucleotidyl transferase HC341_11295 PF00990 Diguanylate cyclase, GGDEF domain HC341_11295 PF17151 Periplasmic sensor domain HC341_11305 PF00535 Glycosyl transferase family 2 HC341_11340 PF12833 Helix-turn-helix domain HC341_11340 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HC341_11340 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HC341_11340 PF02805 Metal binding domain of Ada HC341_11345 PF08669 Glycine cleavage T-protein C-terminal barrel domain HC341_11345 PF01571 Aminomethyltransferase folate-binding domain HC341_11350 PF01261 Xylose isomerase-like TIM barrel HC341_11355 PF00109 Beta-ketoacyl synthase, N-terminal domain HC341_11355 PF00698 Acyl transferase domain HC341_11355 PF08659 KR domain HC341_11355 PF08240 Alcohol dehydrogenase GroES-like domain HC341_11355 PF02801 Beta-ketoacyl synthase, C-terminal domain HC341_11355 PF14765 Polyketide synthase dehydratase HC341_11355 PF00107 Zinc-binding dehydrogenase HC341_11355 PF16197 Ketoacyl-synthetase C-terminal extension HC341_11355 PF00550 Phosphopantetheine attachment site HC341_11375 PF00793 DAHP synthetase I family HC341_11390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_11390 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_11390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_11395 PF03466 LysR substrate binding domain HC341_11395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_11400 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus HC341_11400 PF01048 Phosphorylase superfamily HC341_11410 PF03795 YCII-related domain HC341_11415 PF03795 YCII-related domain HC341_11420 PF08281 Sigma-70, region 4 HC341_11420 PF04542 Sigma-70 region 2 HC341_11430 PF00378 Enoyl-CoA hydratase/isomerase HC341_11435 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_11440 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term HC341_11440 PF12833 Helix-turn-helix domain HC341_11450 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HC341_11455 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HC341_11460 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HC341_11465 PF01061 ABC-2 type transporter HC341_11470 PF00005 ABC transporter HC341_11470 PF13732 Domain of unknown function (DUF4162) HC341_11475 PF03453 MoeA N-terminal region (domain I and II) HC341_11475 PF03454 MoeA C-terminal region (domain IV) HC341_11475 PF00994 Probable molybdopterin binding domain HC341_11485 PF00639 PPIC-type PPIASE domain HC341_11490 PF02665 Nitrate reductase gamma subunit HC341_11495 PF02613 Nitrate reductase delta subunit HC341_11505 PF14710 Respiratory nitrate reductase alpha N-terminal HC341_11505 PF01568 Molydopterin dinucleotide binding domain HC341_11505 PF00384 Molybdopterin oxidoreductase HC341_11510 PF00582 Universal stress protein family HC341_11520 PF07690 Major Facilitator Superfamily HC341_11540 PF07690 Major Facilitator Superfamily HC341_11545 PF00672 HAMP domain HC341_11545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_11545 PF07730 Histidine kinase HC341_11545 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HC341_11550 PF00196 Bacterial regulatory proteins, luxR family HC341_11550 PF00072 Response regulator receiver domain HC341_11555 PF04247 Invasion gene expression up-regulator, SirB HC341_11565 PF00005 ABC transporter HC341_11565 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_11570 PF00501 AMP-binding enzyme HC341_11575 PF02653 Branched-chain amino acid transport system / permease component HC341_11580 PF02653 Branched-chain amino acid transport system / permease component HC341_11580 PF11862 Domain of unknown function (DUF3382) HC341_11590 PF00005 ABC transporter HC341_11600 PF13411 MerR HTH family regulatory protein HC341_11605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_11605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_11605 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_11610 PF01039 Carboxyl transferase domain HC341_11615 PF00378 Enoyl-CoA hydratase/isomerase HC341_11620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HC341_11620 PF00364 Biotin-requiring enzyme HC341_11620 PF00289 Biotin carboxylase, N-terminal domain HC341_11620 PF02785 Biotin carboxylase C-terminal domain HC341_11625 PF00682 HMGL-like HC341_11630 PF03315 Serine dehydratase beta chain HC341_11630 PF03313 Serine dehydratase alpha chain HC341_11645 PF01207 Dihydrouridine synthase (Dus) HC341_11655 PF01625 Peptide methionine sulfoxide reductase HC341_11660 PF01641 SelR domain HC341_11685 PF00691 OmpA family HC341_11710 PF00069 Protein kinase domain HC341_11730 PF05853 beta-keto acid cleavage enzyme HC341_11735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_11735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_11740 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_11740 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_11745 PF12833 Helix-turn-helix domain HC341_11745 PF01965 DJ-1/PfpI family HC341_11755 PF13380 CoA binding domain HC341_11755 PF13607 Succinyl-CoA ligase like flavodoxin domain HC341_11760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_11760 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_11760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_11765 PF00378 Enoyl-CoA hydratase/isomerase HC341_11790 PF08808 RES domain HC341_11815 PF03050 Transposase IS66 family HC341_11815 PF13817 IS66 C-terminal element HC341_11815 PF13007 Transposase C of IS166 homeodomain HC341_11815 PF13005 zinc-finger binding domain of transposase IS66 HC341_11820 PF05717 IS66 Orf2 like protein HC341_11830 PF11855 Protein of unknown function (DUF3375) HC341_11870 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HC341_11870 PF00749 tRNA synthetases class I (E and Q), catalytic domain HC341_11895 PF00176 SNF2 family N-terminal domain HC341_11895 PF00271 Helicase conserved C-terminal domain HC341_11895 PF12419 SNF2 Helicase protein HC341_11910 PF02321 Outer membrane efflux protein HC341_11915 PF13439 Glycosyltransferase Family 4 HC341_11915 PF00534 Glycosyl transferases group 1 HC341_11925 PF14524 Wzt C-terminal domain HC341_11925 PF00005 ABC transporter HC341_11930 PF13439 Glycosyltransferase Family 4 HC341_11930 PF00534 Glycosyl transferases group 1 HC341_11945 PF00005 ABC transporter HC341_11945 PF00664 ABC transporter transmembrane region HC341_11950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HC341_11950 PF00529 HlyD membrane-fusion protein of T1SS HC341_11955 PF13439 Glycosyltransferase Family 4 HC341_11955 PF00534 Glycosyl transferases group 1 HC341_11970 PF01695 IstB-like ATP binding protein HC341_11975 PF00665 Integrase core domain HC341_11990 PF00665 Integrase core domain HC341_11995 PF01695 IstB-like ATP binding protein HC341_12065 PF02698 DUF218 domain HC341_12070 PF02719 Polysaccharide biosynthesis protein HC341_12085 PF05717 IS66 Orf2 like protein HC341_12090 PF13005 zinc-finger binding domain of transposase IS66 HC341_12090 PF13007 Transposase C of IS166 homeodomain HC341_12090 PF13817 IS66 C-terminal element HC341_12090 PF03050 Transposase IS66 family HC341_12120 PF01850 PIN domain HC341_12185 PF05717 IS66 Orf2 like protein HC341_12190 PF13005 zinc-finger binding domain of transposase IS66 HC341_12190 PF13817 IS66 C-terminal element HC341_12190 PF03050 Transposase IS66 family HC341_12190 PF13007 Transposase C of IS166 homeodomain HC341_12260 PF00953 Glycosyl transferase family 4 HC341_12265 PF01370 NAD dependent epimerase/dehydratase family HC341_12280 PF00534 Glycosyl transferases group 1 HC341_12280 PF13439 Glycosyltransferase Family 4 HC341_12295 PF00535 Glycosyl transferase family 2 HC341_12455 PF00753 Metallo-beta-lactamase superfamily HC341_12455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HC341_12455 PF10996 Beta-Casp domain HC341_12480 PF01479 S4 domain HC341_12485 PF01380 SIS domain HC341_12485 PF00571 CBS domain HC341_12490 PF03737 Aldolase/RraA HC341_12495 PF00485 Phosphoribulokinase / Uridine kinase family HC341_12515 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain HC341_12520 PF07883 Cupin domain HC341_12525 PF01797 Transposase IS200 like HC341_12535 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_12540 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HC341_12545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_12550 PF01348 Type II intron maturase HC341_12550 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HC341_12560 PF01758 Sodium Bile acid symporter family HC341_12565 PF13193 AMP-binding enzyme C-terminal domain HC341_12565 PF00501 AMP-binding enzyme HC341_12570 PF00082 Subtilase family HC341_12585 PF05544 Proline racemase HC341_12610 PF17871 AAA lid domain HC341_12610 PF07724 AAA domain (Cdc48 subfamily) HC341_12610 PF10431 C-terminal, D2-small domain, of ClpB protein HC341_12610 PF00004 ATPase family associated with various cellular activities (AAA) HC341_12665 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HC341_12680 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HC341_12680 PF01926 50S ribosome-binding GTPase HC341_12690 PF00639 PPIC-type PPIASE domain HC341_12690 PF09312 SurA N-terminal domain HC341_12705 PF00216 Bacterial DNA-binding protein HC341_12710 PF02190 ATP-dependent protease La (LON) substrate-binding domain HC341_12710 PF05362 Lon protease (S16) C-terminal proteolytic domain HC341_12710 PF00004 ATPase family associated with various cellular activities (AAA) HC341_12715 PF06689 ClpX C4-type zinc finger HC341_12715 PF10431 C-terminal, D2-small domain, of ClpB protein HC341_12715 PF07724 AAA domain (Cdc48 subfamily) HC341_12720 PF00574 Clp protease HC341_12725 PF05697 Bacterial trigger factor protein (TF) HC341_12725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HC341_12725 PF05698 Bacterial trigger factor protein (TF) C-terminus HC341_12735 PF02321 Outer membrane efflux protein HC341_12740 PF00873 AcrB/AcrD/AcrF family HC341_12755 PF07690 Major Facilitator Superfamily HC341_12760 PF13307 Helicase C-terminal domain HC341_12760 PF06733 DEAD_2 HC341_12790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HC341_12790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HC341_12795 PF07238 PilZ domain HC341_12800 PF18073 Rubredoxin metal binding domain HC341_12805 PF01168 Alanine racemase, N-terminal domain HC341_12805 PF00842 Alanine racemase, C-terminal domain HC341_12810 PF03796 DnaB-like helicase C terminal domain HC341_12810 PF00772 DnaB-like helicase N terminal domain HC341_12815 PF03948 Ribosomal protein L9, C-terminal domain HC341_12815 PF01281 Ribosomal protein L9, N-terminal domain HC341_12825 PF01084 Ribosomal protein S18 HC341_12835 PF01250 Ribosomal protein S6 HC341_12840 PF08032 RNA 2'-O ribose methyltransferase substrate binding HC341_12840 PF00588 SpoU rRNA Methylase family HC341_12845 PF17876 Cold shock domain HC341_12845 PF08461 Ribonuclease R winged-helix domain HC341_12845 PF08206 Ribonuclease B OB domain HC341_12845 PF00773 RNB domain HC341_12845 PF00575 S1 RNA binding domain HC341_12855 PF00709 Adenylosuccinate synthetase HC341_12860 PF13393 Histidyl-tRNA synthetase HC341_12870 PF01145 SPFH domain / Band 7 family HC341_12875 PF01145 SPFH domain / Band 7 family HC341_12875 PF12221 Bacterial membrane protein N terminal HC341_12880 PF01926 50S ribosome-binding GTPase HC341_12880 PF16360 GTP-binding GTPase Middle Region HC341_12880 PF13167 GTP-binding GTPase N-terminal HC341_12885 PF17209 Hfq protein HC341_12895 PF01119 DNA mismatch repair protein, C-terminal domain HC341_12895 PF08676 MutL C terminal dimerisation domain HC341_12900 PF01520 N-acetylmuramoyl-L-alanine amidase HC341_12900 PF11741 AMIN domain HC341_12905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HC341_12910 PF03853 YjeF-related protein N-terminus HC341_12910 PF01256 Carbohydrate kinase HC341_12915 PF08331 Domain of unknown function (DUF1730) HC341_12920 PF02569 Pantoate-beta-alanine ligase HC341_12925 PF02548 Ketopantoate hydroxymethyltransferase HC341_12930 PF01712 Deoxynucleoside kinase HC341_12935 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HC341_12940 PF12627 Probable RNA and SrmB- binding site of polymerase A HC341_12940 PF12626 Polymerase A arginine-rich C-terminus HC341_12940 PF01743 Poly A polymerase head domain HC341_12955 PF03739 Lipopolysaccharide export system permease LptF/LptG HC341_12960 PF03739 Lipopolysaccharide export system permease LptF/LptG HC341_12965 PF02789 Cytosol aminopeptidase family, N-terminal domain HC341_12965 PF00883 Cytosol aminopeptidase family, catalytic domain HC341_12980 PF08264 Anticodon-binding domain of tRNA HC341_12980 PF00133 tRNA synthetases class I (I, L, M and V) HC341_12980 PF10458 Valyl tRNA synthetase tRNA binding arm HC341_12990 PF00583 Acetyltransferase (GNAT) family HC341_12995 PF03167 Uracil DNA glycosylase superfamily HC341_13000 PF01066 CDP-alcohol phosphatidyltransferase HC341_13005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HC341_13005 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HC341_13010 PF10369 Small subunit of acetolactate synthase HC341_13020 PF04073 Aminoacyl-tRNA editing domain HC341_13020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HC341_13020 PF03129 Anticodon binding domain HC341_13025 PF01464 Transglycosylase SLT domain HC341_13025 PF14718 Soluble lytic murein transglycosylase L domain HC341_13030 PF12105 SpoU, rRNA methylase, C-terminal HC341_13030 PF00588 SpoU rRNA Methylase family HC341_13040 PF10609 NUBPL iron-transfer P-loop NTPase HC341_13055 PF00080 Copper/zinc superoxide dismutase (SODC) HC341_13060 PF00994 Probable molybdopterin binding domain HC341_13065 PF02391 MoaE protein HC341_13075 PF02657 Fe-S metabolism associated domain HC341_13080 PF00107 Zinc-binding dehydrogenase HC341_13080 PF08240 Alcohol dehydrogenase GroES-like domain HC341_13085 PF16884 N-terminal domain of oxidoreductase HC341_13085 PF00107 Zinc-binding dehydrogenase HC341_13090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_13090 PF12806 Acetyl-CoA dehydrogenase C-terminal like HC341_13090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_13090 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_13120 PF00814 Glycoprotease family HC341_13125 PF07690 Major Facilitator Superfamily HC341_13130 PF00583 Acetyltransferase (GNAT) family HC341_13135 PF00202 Aminotransferase class-III HC341_13140 PF06339 Ectoine synthase HC341_13145 PF02028 BCCT, betaine/carnitine/choline family transporter HC341_13160 PF01244 Membrane dipeptidase (Peptidase family M19) HC341_13165 PF00171 Aldehyde dehydrogenase family HC341_13170 PF03466 LysR substrate binding domain HC341_13170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_13180 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HC341_13180 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region HC341_13180 PF10531 SLBB domain HC341_13185 PF04235 Protein of unknown function (DUF418) HC341_13195 PF00501 AMP-binding enzyme HC341_13195 PF13193 AMP-binding enzyme C-terminal domain HC341_13210 PF04851 Type III restriction enzyme, res subunit HC341_13210 PF13307 Helicase C-terminal domain HC341_13220 PF14814 Bifunctional transglycosylase second domain HC341_13220 PF00905 Penicillin binding protein transpeptidase domain HC341_13220 PF00912 Transglycosylase HC341_13225 PF02600 Disulfide bond formation protein DsbB HC341_13230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_13240 PF00266 Aminotransferase class-V HC341_13245 PF01458 Uncharacterized protein family (UPF0051) HC341_13250 PF00005 ABC transporter HC341_13255 PF01458 Uncharacterized protein family (UPF0051) HC341_13260 PF02082 Transcriptional regulator HC341_13270 PF07670 Nucleoside recognition HC341_13295 PF00581 Rhodanese-like domain HC341_13305 PF00072 Response regulator receiver domain HC341_13305 PF00196 Bacterial regulatory proteins, luxR family HC341_13310 PF00512 His Kinase A (phospho-acceptor) domain HC341_13310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_13310 PF00989 PAS fold HC341_13315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HC341_13315 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_13320 PF09335 SNARE associated Golgi protein HC341_13345 PF00224 Pyruvate kinase, barrel domain HC341_13345 PF02887 Pyruvate kinase, alpha/beta domain HC341_13350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HC341_13350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HC341_13355 PF01081 KDPG and KHG aldolase HC341_13360 PF01418 Helix-turn-helix domain, rpiR family HC341_13360 PF02685 Glucokinase HC341_13360 PF01380 SIS domain HC341_13380 PF00571 CBS domain HC341_13390 PF07556 Protein of unknown function (DUF1538) HC341_13400 PF00690 Cation transporter/ATPase, N-terminus HC341_13400 PF00689 Cation transporting ATPase, C-terminus HC341_13405 PF00364 Biotin-requiring enzyme HC341_13405 PF00561 alpha/beta hydrolase fold HC341_13415 PF01965 DJ-1/PfpI family HC341_13425 PF03358 NADPH-dependent FMN reductase HC341_13435 PF05726 Pirin C-terminal cupin domain HC341_13435 PF02678 Pirin HC341_13440 PF08240 Alcohol dehydrogenase GroES-like domain HC341_13440 PF00107 Zinc-binding dehydrogenase HC341_13455 PF13411 MerR HTH family regulatory protein HC341_13460 PF00216 Bacterial DNA-binding protein HC341_13465 PF03483 B3/4 domain HC341_13465 PF03484 tRNA synthetase B5 domain HC341_13465 PF03147 Ferredoxin-fold anticodon binding domain HC341_13465 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HC341_13465 PF01588 Putative tRNA binding domain HC341_13470 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HC341_13470 PF01409 tRNA synthetases class II core domain (F) HC341_13475 PF00453 Ribosomal protein L20 HC341_13480 PF01632 Ribosomal protein L35 HC341_13490 PF03129 Anticodon binding domain HC341_13490 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HC341_13490 PF02824 TGS domain HC341_13490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HC341_13495 PF00990 Diguanylate cyclase, GGDEF domain HC341_13495 PF00360 Phytochrome region HC341_13495 PF01590 GAF domain HC341_13495 PF00563 EAL domain HC341_13500 PF08448 PAS fold HC341_13500 PF00990 Diguanylate cyclase, GGDEF domain HC341_13525 PF04186 FxsA cytoplasmic membrane protein HC341_13545 PF00561 alpha/beta hydrolase fold HC341_13545 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HC341_13560 PF01323 DSBA-like thioredoxin domain HC341_13570 PF00924 Mechanosensitive ion channel HC341_13575 PF00072 Response regulator receiver domain HC341_13575 PF00990 Diguanylate cyclase, GGDEF domain HC341_13585 PF04011 LemA family HC341_13590 PF01435 Peptidase family M48 HC341_13600 PF10431 C-terminal, D2-small domain, of ClpB protein HC341_13600 PF02861 Clp amino terminal domain, pathogenicity island component HC341_13600 PF17871 AAA lid domain HC341_13600 PF00004 ATPase family associated with various cellular activities (AAA) HC341_13600 PF07724 AAA domain (Cdc48 subfamily) HC341_13630 PF00795 Carbon-nitrogen hydrolase HC341_13635 PF00106 short chain dehydrogenase HC341_13645 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_13645 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_13645 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_13650 PF01565 FAD binding domain HC341_13650 PF02913 FAD linked oxidases, C-terminal domain HC341_13670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_13670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_13675 PF04354 ZipA, C-terminal FtsZ-binding domain HC341_13685 PF02463 RecF/RecN/SMC N terminal domain HC341_13690 PF14489 QueF-like protein HC341_13700 PF00749 tRNA synthetases class I (E and Q), catalytic domain HC341_13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_13710 PF00512 His Kinase A (phospho-acceptor) domain HC341_13710 PF00989 PAS fold HC341_13715 PF00072 Response regulator receiver domain HC341_13715 PF00158 Sigma-54 interaction domain HC341_13715 PF02954 Bacterial regulatory protein, Fis family HC341_13720 PF16177 Acetyl-coenzyme A synthetase N-terminus HC341_13720 PF13193 AMP-binding enzyme C-terminal domain HC341_13720 PF00501 AMP-binding enzyme HC341_13735 PF03475 3-alpha domain HC341_13735 PF03473 MOSC domain HC341_13740 PF00563 EAL domain HC341_13740 PF08448 PAS fold HC341_13740 PF00990 Diguanylate cyclase, GGDEF domain HC341_13740 PF08447 PAS fold HC341_13755 PF00669 Bacterial flagellin N-terminal helical region HC341_13760 PF00460 Flagella basal body rod protein HC341_13760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HC341_13765 PF10135 Rod binding protein HC341_13765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HC341_13770 PF02119 Flagellar P-ring protein HC341_13775 PF02107 Flagellar L-ring protein HC341_13780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HC341_13780 PF00460 Flagella basal body rod protein HC341_13785 PF00460 Flagella basal body rod protein HC341_13785 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HC341_13790 PF07559 Flagellar basal body protein FlaE HC341_13790 PF00460 Flagella basal body rod protein HC341_13790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HC341_13800 PF00460 Flagella basal body rod protein HC341_13800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HC341_13805 PF00460 Flagella basal body rod protein HC341_13810 PF03705 CheR methyltransferase, all-alpha domain HC341_13810 PF01739 CheR methyltransferase, SAM binding domain HC341_13815 PF00072 Response regulator receiver domain HC341_13815 PF01584 CheW-like domain HC341_13840 PF07690 Major Facilitator Superfamily HC341_13850 PF00749 tRNA synthetases class I (E and Q), catalytic domain HC341_13865 PF07995 Glucose / Sorbosone dehydrogenase HC341_13870 PF00034 Cytochrome c HC341_13875 PF07715 TonB-dependent Receptor Plug Domain HC341_13875 PF00593 TonB dependent receptor HC341_13890 PF00067 Cytochrome P450 HC341_13895 PF01336 OB-fold nucleic acid binding domain HC341_13895 PF14579 Helix-hairpin-helix motif HC341_13895 PF02811 PHP domain HC341_13895 PF07733 Bacterial DNA polymerase III alpha NTPase domain HC341_13895 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HC341_13900 PF09190 DALR domain HC341_13900 PF01406 tRNA synthetases class I (C) catalytic domain HC341_13905 PF00149 Calcineurin-like phosphoesterase HC341_13910 PF00196 Bacterial regulatory proteins, luxR family HC341_13910 PF00072 Response regulator receiver domain HC341_13925 PF00171 Aldehyde dehydrogenase family HC341_13930 PF00732 GMC oxidoreductase HC341_13930 PF05199 GMC oxidoreductase HC341_13935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HC341_13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HC341_13940 PF02515 CoA-transferase family III HC341_13945 PF00766 Electron transfer flavoprotein FAD-binding domain HC341_13945 PF01012 Electron transfer flavoprotein domain HC341_13950 PF01012 Electron transfer flavoprotein domain HC341_13955 PF01475 Ferric uptake regulator family HC341_13960 PF02321 Outer membrane efflux protein HC341_13985 PF00005 ABC transporter HC341_14000 PF01636 Phosphotransferase enzyme family HC341_14010 PF01975 Survival protein SurE HC341_14015 PF01575 MaoC like domain HC341_14020 PF00108 Thiolase, N-terminal domain HC341_14020 PF02803 Thiolase, C-terminal domain HC341_14025 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_14025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_14025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_14030 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_14030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_14030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_14035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_14035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_14035 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_14035 PF12806 Acetyl-CoA dehydrogenase C-terminal like HC341_14040 PF00596 Class II Aldolase and Adducin N-terminal domain HC341_14045 PF01734 Patatin-like phospholipase HC341_14050 PF01592 NifU-like N terminal domain HC341_14060 PF12804 MobA-like NTP transferase domain HC341_14060 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_14065 PF02625 XdhC and CoxI family HC341_14065 PF13478 XdhC Rossmann domain HC341_14080 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase HC341_14080 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain HC341_14085 PF00111 2Fe-2S iron-sulfur cluster binding domain HC341_14085 PF01799 [2Fe-2S] binding domain HC341_14090 PF00941 FAD binding domain in molybdopterin dehydrogenase HC341_14090 PF03450 CO dehydrogenase flavoprotein C-terminal domain HC341_14095 PF04397 LytTr DNA-binding domain HC341_14105 PF07995 Glucose / Sorbosone dehydrogenase HC341_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_14115 PF00512 His Kinase A (phospho-acceptor) domain HC341_14120 PF12697 Alpha/beta hydrolase family HC341_14125 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HC341_14135 PF03703 Bacterial PH domain HC341_14140 PF06271 RDD family HC341_14165 PF00448 SRP54-type protein, GTPase domain HC341_14165 PF02881 SRP54-type protein, helical bundle domain HC341_14165 PF02978 Signal peptide binding domain HC341_14170 PF01578 Cytochrome C assembly protein HC341_14175 PF01595 Cyclin M transmembrane N-terminal domain HC341_14175 PF03471 Transporter associated domain HC341_14175 PF00571 CBS domain HC341_14180 PF00795 Carbon-nitrogen hydrolase HC341_14185 PF00571 CBS domain HC341_14185 PF03471 Transporter associated domain HC341_14190 PF02130 Uncharacterized protein family UPF0054 HC341_14195 PF02562 PhoH-like protein HC341_14200 PF04055 Radical SAM superfamily HC341_14200 PF01938 TRAM domain HC341_14200 PF00919 Uncharacterized protein family UPF0004 HC341_14205 PF01649 Ribosomal protein S20 HC341_14210 PF01472 PUA domain HC341_14210 PF00696 Amino acid kinase family HC341_14215 PF01018 GTP1/OBG HC341_14215 PF01926 50S ribosome-binding GTPase HC341_14220 PF01016 Ribosomal L27 protein HC341_14225 PF00829 Ribosomal prokaryotic L21 protein HC341_14230 PF00348 Polyprenyl synthetase HC341_14260 PF00158 Sigma-54 interaction domain HC341_14260 PF13426 PAS domain HC341_14260 PF02954 Bacterial regulatory protein, Fis family HC341_14265 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_14275 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_14285 PF13193 AMP-binding enzyme C-terminal domain HC341_14285 PF00501 AMP-binding enzyme HC341_14290 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HC341_14290 PF00437 Type II/IV secretion system protein HC341_14295 PF00482 Type II secretion system (T2SS), protein F HC341_14300 PF06750 Bacterial Peptidase A24 N-terminal domain HC341_14300 PF01478 Type IV leader peptidase family HC341_14305 PF01121 Dephospho-CoA kinase HC341_14310 PF07072 Cell division protein HC341_14315 PF03884 DNA gyrase inhibitor YacG HC341_14320 PF02581 Thiamine monophosphate synthase HC341_14325 PF01960 ArgJ family HC341_14330 PF07517 SecA DEAD-like domain HC341_14330 PF02810 SEC-C motif HC341_14330 PF07516 SecA Wing and Scaffold domain HC341_14330 PF01043 SecA preprotein cross-linking domain HC341_14340 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HC341_14345 PF00091 Tubulin/FtsZ family, GTPase domain HC341_14345 PF12327 FtsZ family, C-terminal domain HC341_14350 PF02491 SHS2 domain inserted in FTSA HC341_14355 PF08478 POTRA domain, FtsQ-type HC341_14355 PF03799 Cell division protein FtsQ HC341_14360 PF01820 D-ala D-ala ligase N-terminus HC341_14360 PF07478 D-ala D-ala ligase C-terminus HC341_14365 PF01565 FAD binding domain HC341_14365 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HC341_14370 PF08245 Mur ligase middle domain HC341_14370 PF02875 Mur ligase family, glutamate ligase domain HC341_14370 PF01225 Mur ligase family, catalytic domain HC341_14375 PF03033 Glycosyltransferase family 28 N-terminal domain HC341_14375 PF04101 Glycosyltransferase family 28 C-terminal domain HC341_14380 PF01098 Cell cycle protein HC341_14385 PF02875 Mur ligase family, glutamate ligase domain HC341_14385 PF08245 Mur ligase middle domain HC341_14390 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HC341_14390 PF00953 Glycosyl transferase family 4 HC341_14395 PF02875 Mur ligase family, glutamate ligase domain HC341_14395 PF08245 Mur ligase middle domain HC341_14395 PF01225 Mur ligase family, catalytic domain HC341_14400 PF01225 Mur ligase family, catalytic domain HC341_14400 PF08245 Mur ligase middle domain HC341_14400 PF02875 Mur ligase family, glutamate ligase domain HC341_14405 PF03717 Penicillin-binding Protein dimerisation domain HC341_14405 PF00905 Penicillin binding protein transpeptidase domain HC341_14415 PF01795 MraW methylase family HC341_14420 PF02381 MraZ protein, putative antitoxin-like HC341_14425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_14430 PF04348 LppC putative lipoprotein HC341_14435 PF02021 Uncharacterised protein family UPF0102 HC341_14440 PF13580 SIS domain HC341_14450 PF04386 Stringent starvation protein B HC341_14455 PF00043 Glutathione S-transferase, C-terminal domain HC341_14455 PF02798 Glutathione S-transferase, N-terminal domain HC341_14460 PF02167 Cytochrome C1 family HC341_14465 PF00033 Cytochrome b/b6/petB HC341_14465 PF00032 Cytochrome b(C-terminal)/b6/petD HC341_14470 PF00355 Rieske [2Fe-2S] domain HC341_14470 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HC341_14475 PF01784 NIF3 (NGG1p interacting factor 3) HC341_14480 PF17820 PDZ domain HC341_14480 PF13180 PDZ domain HC341_14485 PF00155 Aminotransferase class I and II HC341_14490 PF00815 Histidinol dehydrogenase HC341_14495 PF01634 ATP phosphoribosyltransferase HC341_14500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HC341_14505 PF01722 BolA-like protein HC341_14515 PF05494 MlaC protein HC341_14520 PF02470 MlaD protein HC341_14525 PF02405 Permease MlaE HC341_14530 PF00005 ABC transporter HC341_14535 PF01699 Sodium/calcium exchanger protein HC341_14540 PF01380 SIS domain HC341_14540 PF00571 CBS domain HC341_14560 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_14560 PF00005 ABC transporter HC341_14565 PF00309 Sigma-54 factor, Activator interacting domain (AID) HC341_14565 PF04552 Sigma-54, DNA binding domain HC341_14565 PF04963 Sigma-54 factor, core binding domain HC341_14570 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HC341_14575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HC341_14580 PF02603 HPr Serine kinase N terminus HC341_14580 PF07475 HPr Serine kinase C-terminal domain HC341_14585 PF03668 P-loop ATPase protein family HC341_14595 PF00381 PTS HPr component phosphorylation site HC341_14605 PF01523 Putative modulator of DNA gyrase HC341_14610 PF01523 Putative modulator of DNA gyrase HC341_14615 PF00795 Carbon-nitrogen hydrolase HC341_14625 PF10150 Ribonuclease E/G family HC341_14625 PF00575 S1 RNA binding domain HC341_14630 PF02545 Maf-like protein HC341_14635 PF02590 Predicted SPOUT methyltransferase HC341_14645 PF01467 Cytidylyltransferase-like HC341_14650 PF00171 Aldehyde dehydrogenase family HC341_14655 PF06144 DNA polymerase III, delta subunit HC341_14655 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HC341_14665 PF13603 Leucyl-tRNA synthetase, Domain 2 HC341_14665 PF00133 tRNA synthetases class I (I, L, M and V) HC341_14665 PF08264 Anticodon-binding domain of tRNA HC341_14675 PF01053 Cys/Met metabolism PLP-dependent enzyme HC341_14685 PF07722 Peptidase C26 HC341_14690 PF02574 Homocysteine S-methyltransferase HC341_14690 PF00809 Pterin binding enzyme HC341_14690 PF02607 B12 binding domain HC341_14690 PF02310 B12 binding domain HC341_14690 PF02965 Vitamin B12 dependent methionine synthase, activation domain HC341_14695 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase HC341_14695 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain HC341_14705 PF00873 AcrB/AcrD/AcrF family HC341_14720 PF13180 PDZ domain HC341_14720 PF17820 PDZ domain HC341_14725 PF03061 Thioesterase superfamily HC341_14730 PF13291 ACT domain HC341_14730 PF00291 Pyridoxal-phosphate dependent enzyme HC341_14740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HC341_14745 PF16884 N-terminal domain of oxidoreductase HC341_14745 PF00107 Zinc-binding dehydrogenase HC341_14750 PF00582 Universal stress protein family HC341_14755 PF03458 UPF0126 domain HC341_14765 PF17755 UvrA DNA-binding domain HC341_14765 PF17760 UvrA interaction domain HC341_14765 PF00005 ABC transporter HC341_14780 PF07311 Dodecin HC341_14785 PF04343 Protein of unknown function, DUF488 HC341_14790 PF00326 Prolyl oligopeptidase family HC341_14790 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HC341_14800 PF01588 Putative tRNA binding domain HC341_14800 PF09334 tRNA synthetases class I (M) HC341_14805 PF01609 Transposase DDE domain HC341_14805 PF05598 Transposase domain (DUF772) HC341_14810 PF00563 EAL domain HC341_14810 PF03707 Bacterial signalling protein N terminal repeat HC341_14810 PF00990 Diguanylate cyclase, GGDEF domain HC341_14815 PF07995 Glucose / Sorbosone dehydrogenase HC341_14820 PF01266 FAD dependent oxidoreductase HC341_14825 PF07724 AAA domain (Cdc48 subfamily) HC341_14825 PF10431 C-terminal, D2-small domain, of ClpB protein HC341_14825 PF00004 ATPase family associated with various cellular activities (AAA) HC341_14825 PF02861 Clp amino terminal domain, pathogenicity island component HC341_14825 PF17871 AAA lid domain HC341_14835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_14835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_14835 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_14840 PF00106 short chain dehydrogenase HC341_14845 PF02515 CoA-transferase family III HC341_14850 PF02803 Thiolase, C-terminal domain HC341_14850 PF00108 Thiolase, N-terminal domain HC341_14855 PF00378 Enoyl-CoA hydratase/isomerase HC341_14860 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HC341_14860 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HC341_14865 PF00378 Enoyl-CoA hydratase/isomerase HC341_14870 PF00378 Enoyl-CoA hydratase/isomerase HC341_14875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_14875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_14875 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_14880 PF00171 Aldehyde dehydrogenase family HC341_14890 PF00005 ABC transporter HC341_14905 PF02653 Branched-chain amino acid transport system / permease component HC341_14910 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_14910 PF00005 ABC transporter HC341_14915 PF00501 AMP-binding enzyme HC341_14920 PF00436 Single-strand binding protein family HC341_14925 PF07690 Major Facilitator Superfamily HC341_14930 PF00005 ABC transporter HC341_14930 PF17755 UvrA DNA-binding domain HC341_14930 PF17760 UvrA interaction domain HC341_14935 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HC341_14935 PF00056 lactate/malate dehydrogenase, NAD binding domain HC341_14950 PF01196 Ribosomal protein L17 HC341_14955 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HC341_14955 PF01000 RNA polymerase Rpb3/RpoA insert domain HC341_14955 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HC341_14960 PF01479 S4 domain HC341_14960 PF00163 Ribosomal protein S4/S9 N-terminal domain HC341_14965 PF00411 Ribosomal protein S11 HC341_14970 PF00416 Ribosomal protein S13/S18 HC341_14975 PF00444 Ribosomal protein L36 HC341_14980 PF00344 SecY translocase HC341_14985 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HC341_14990 PF00327 Ribosomal protein L30p/L7e HC341_14995 PF00333 Ribosomal protein S5, N-terminal domain HC341_14995 PF03719 Ribosomal protein S5, C-terminal domain HC341_15000 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HC341_15005 PF00347 Ribosomal protein L6 HC341_15010 PF00410 Ribosomal protein S8 HC341_15015 PF00253 Ribosomal protein S14p/S29e HC341_15020 PF00281 Ribosomal protein L5 HC341_15020 PF00673 ribosomal L5P family C-terminus HC341_15025 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HC341_15025 PF00467 KOW motif HC341_15030 PF00238 Ribosomal protein L14p/L23e HC341_15035 PF00366 Ribosomal protein S17 HC341_15040 PF00831 Ribosomal L29 protein HC341_15045 PF00252 Ribosomal protein L16p/L10e HC341_15050 PF00189 Ribosomal protein S3, C-terminal domain HC341_15050 PF07650 KH domain HC341_15055 PF00237 Ribosomal protein L22p/L17e HC341_15060 PF00203 Ribosomal protein S19 HC341_15065 PF03947 Ribosomal Proteins L2, C-terminal domain HC341_15065 PF00181 Ribosomal Proteins L2, RNA binding domain HC341_15070 PF00276 Ribosomal protein L23 HC341_15075 PF00573 Ribosomal protein L4/L1 family HC341_15080 PF00297 Ribosomal protein L3 HC341_15085 PF00338 Ribosomal protein S10p/S20e HC341_15090 PF00009 Elongation factor Tu GTP binding domain HC341_15090 PF03144 Elongation factor Tu domain 2 HC341_15090 PF03143 Elongation factor Tu C-terminal domain HC341_15095 PF03764 Elongation factor G, domain IV HC341_15095 PF14492 Elongation Factor G, domain II HC341_15095 PF00679 Elongation factor G C-terminus HC341_15095 PF03144 Elongation factor Tu domain 2 HC341_15095 PF00009 Elongation factor Tu GTP binding domain HC341_15100 PF00177 Ribosomal protein S7p/S5e HC341_15105 PF00164 Ribosomal protein S12/S23 HC341_15110 PF04998 RNA polymerase Rpb1, domain 5 HC341_15110 PF04997 RNA polymerase Rpb1, domain 1 HC341_15110 PF00623 RNA polymerase Rpb1, domain 2 HC341_15110 PF05000 RNA polymerase Rpb1, domain 4 HC341_15110 PF04983 RNA polymerase Rpb1, domain 3 HC341_15115 PF04563 RNA polymerase beta subunit HC341_15115 PF10385 RNA polymerase beta subunit external 1 domain HC341_15115 PF04561 RNA polymerase Rpb2, domain 2 HC341_15115 PF04560 RNA polymerase Rpb2, domain 7 HC341_15115 PF04565 RNA polymerase Rpb2, domain 3 HC341_15115 PF00562 RNA polymerase Rpb2, domain 6 HC341_15120 PF00542 Ribosomal protein L7/L12 C-terminal domain HC341_15120 PF16320 Ribosomal protein L7/L12 dimerisation domain HC341_15125 PF00466 Ribosomal protein L10 HC341_15130 PF00687 Ribosomal protein L1p/L10e family HC341_15135 PF03946 Ribosomal protein L11, N-terminal domain HC341_15135 PF00298 Ribosomal protein L11, RNA binding domain HC341_15140 PF00467 KOW motif HC341_15140 PF02357 Transcription termination factor nusG HC341_15145 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HC341_15155 PF03143 Elongation factor Tu C-terminal domain HC341_15155 PF03144 Elongation factor Tu domain 2 HC341_15155 PF00009 Elongation factor Tu GTP binding domain HC341_15175 PF00571 CBS domain HC341_15175 PF01368 DHH family HC341_15175 PF02272 DHHA1 domain HC341_15175 PF01743 Poly A polymerase head domain HC341_15180 PF00672 HAMP domain HC341_15180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_15180 PF17200 Single Cache domain 2 HC341_15190 PF01926 50S ribosome-binding GTPase HC341_15190 PF06071 Protein of unknown function (DUF933) HC341_15195 PF01195 Peptidyl-tRNA hydrolase HC341_15200 PF14693 Ribosomal protein TL5, C-terminal domain HC341_15200 PF01386 Ribosomal L25p family HC341_15205 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HC341_15205 PF14572 Phosphoribosyl synthetase-associated domain HC341_15215 PF00288 GHMP kinases N terminal domain HC341_15215 PF08544 GHMP kinases C terminal HC341_15220 PF03550 Outer membrane lipoprotein LolB HC341_15230 PF01488 Shikimate / quinate 5-dehydrogenase HC341_15230 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HC341_15230 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HC341_15235 PF03462 PCRF domain HC341_15235 PF00472 RF-1 domain HC341_15240 PF00950 ABC 3 transport family HC341_15245 PF00005 ABC transporter HC341_15255 PF01258 Prokaryotic dksA/traR C4-type zinc finger HC341_15260 PF00793 DAHP synthetase I family HC341_15265 PF10431 C-terminal, D2-small domain, of ClpB protein HC341_15265 PF06689 ClpX C4-type zinc finger HC341_15265 PF07724 AAA domain (Cdc48 subfamily) HC341_15270 PF03966 Trm112p-like protein HC341_15275 PF05175 Methyltransferase small domain HC341_15275 PF17827 PrmC N-terminal domain HC341_15280 PF00899 ThiF family HC341_15285 PF01430 Hsp33 protein HC341_15290 PF02637 GatB domain HC341_15290 PF02934 GatB/GatE catalytic domain HC341_15295 PF01425 Amidase HC341_15300 PF02686 Glu-tRNAGln amidotransferase C subunit HC341_15310 PF04085 rod shape-determining protein MreC HC341_15315 PF04093 rod shape-determining protein MreD HC341_15320 PF03717 Penicillin-binding Protein dimerisation domain HC341_15320 PF00905 Penicillin binding protein transpeptidase domain HC341_15325 PF01098 Cell cycle protein HC341_15330 PF13406 Transglycosylase SLT domain HC341_15335 PF03330 Lytic transglycolase HC341_15335 PF05036 Sporulation related domain HC341_15340 PF07943 Penicillin-binding protein 5, C-terminal domain HC341_15340 PF00768 D-alanyl-D-alanine carboxypeptidase HC341_15345 PF04359 Protein of unknown function (DUF493) HC341_15350 PF03099 Biotin/lipoate A/B protein ligase family HC341_15360 PF00483 Nucleotidyl transferase HC341_15365 PF01636 Phosphotransferase enzyme family HC341_15370 PF04453 LPS transport system D HC341_15375 PF09312 SurA N-terminal domain HC341_15375 PF00639 PPIC-type PPIASE domain HC341_15380 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HC341_15385 PF00398 Ribosomal RNA adenine dimethylase HC341_15390 PF00582 Universal stress protein family HC341_15395 PF00923 Transaldolase/Fructose-6-phosphate aldolase HC341_15400 PF04379 ApaG domain HC341_15405 PF00149 Calcineurin-like phosphoesterase HC341_15410 PF03186 CobD/Cbib protein HC341_15415 PF01510 N-acetylmuramoyl-L-alanine amidase HC341_15420 PF03190 Protein of unknown function, DUF255 HC341_15430 PF02843 Phosphoribosylglycinamide synthetase, C domain HC341_15430 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HC341_15430 PF02844 Phosphoribosylglycinamide synthetase, N domain HC341_15435 PF02142 MGS-like domain HC341_15435 PF01808 AICARFT/IMPCHase bienzyme HC341_15440 PF02954 Bacterial regulatory protein, Fis family HC341_15460 PF00719 Inorganic pyrophosphatase HC341_15465 PF00365 Phosphofructokinase HC341_15475 PF02875 Mur ligase family, glutamate ligase domain HC341_15475 PF08245 Mur ligase middle domain HC341_15475 PF01225 Mur ligase family, catalytic domain HC341_15480 PF02441 Flavoprotein HC341_15490 PF00202 Aminotransferase class-III HC341_15495 PF02581 Thiamine monophosphate synthase HC341_15500 PF00301 Rubredoxin HC341_15510 PF00149 Calcineurin-like phosphoesterase HC341_15520 PF00696 Amino acid kinase family HC341_15520 PF00583 Acetyltransferase (GNAT) family HC341_15525 PF01546 Peptidase family M20/M25/M40 HC341_15525 PF07687 Peptidase dimerisation domain HC341_15530 PF08239 Bacterial SH3 domain HC341_15535 PF10672 S-adenosylmethionine-dependent methyltransferase HC341_15535 PF17785 PUA-like domain HC341_15540 PF01790 Prolipoprotein diacylglyceryl transferase HC341_15545 PF00303 Thymidylate synthase HC341_15550 PF00186 Dihydrofolate reductase HC341_15555 PF02310 B12 binding domain HC341_15555 PF02607 B12 binding domain HC341_15555 PF13411 MerR HTH family regulatory protein HC341_15560 PF00875 DNA photolyase HC341_15560 PF03441 FAD binding domain of DNA photolyase HC341_15565 PF01968 Hydantoinase/oxoprolinase HC341_15565 PF05378 Hydantoinase/oxoprolinase N-terminal region HC341_15570 PF00563 EAL domain HC341_15570 PF05231 MASE1 HC341_15575 PF01227 GTP cyclohydrolase I HC341_15580 PF02152 Dihydroneopterin aldolase HC341_15595 PF03471 Transporter associated domain HC341_15595 PF00999 Sodium/hydrogen exchanger family HC341_15595 PF02080 TrkA-C domain HC341_15620 PF00378 Enoyl-CoA hydratase/isomerase HC341_15625 PF00440 Bacterial regulatory proteins, tetR family HC341_15625 PF13977 BetI-type transcriptional repressor, C-terminal HC341_15635 PF00849 RNA pseudouridylate synthase HC341_15635 PF01479 S4 domain HC341_15640 PF13525 Outer membrane lipoprotein HC341_15645 PF00543 Nitrogen regulatory protein P-II HC341_15650 PF02540 NAD synthase HC341_15650 PF00795 Carbon-nitrogen hydrolase HC341_15655 PF00549 CoA-ligase HC341_15655 PF02629 CoA binding domain HC341_15660 PF00549 CoA-ligase HC341_15660 PF08442 ATP-grasp domain HC341_15680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_15680 PF00512 His Kinase A (phospho-acceptor) domain HC341_15685 PF00072 Response regulator receiver domain HC341_15685 PF00158 Sigma-54 interaction domain HC341_15685 PF02954 Bacterial regulatory protein, Fis family HC341_15690 PF00114 Pilin (bacterial filament) HC341_15690 PF07963 Prokaryotic N-terminal methylation motif HC341_15700 PF00114 Pilin (bacterial filament) HC341_15700 PF07963 Prokaryotic N-terminal methylation motif HC341_15705 PF00990 Diguanylate cyclase, GGDEF domain HC341_15710 PF13005 zinc-finger binding domain of transposase IS66 HC341_15710 PF13007 Transposase C of IS166 homeodomain HC341_15710 PF13817 IS66 C-terminal element HC341_15710 PF03050 Transposase IS66 family HC341_15735 PF01521 Iron-sulphur cluster biosynthesis HC341_15740 PF00196 Bacterial regulatory proteins, luxR family HC341_15740 PF00072 Response regulator receiver domain HC341_15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_15745 PF00512 His Kinase A (phospho-acceptor) domain HC341_15745 PF00989 PAS fold HC341_15750 PF13193 AMP-binding enzyme C-terminal domain HC341_15750 PF00501 AMP-binding enzyme HC341_15760 PF00582 Universal stress protein family HC341_15765 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_15765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_15765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_15765 PF12806 Acetyl-CoA dehydrogenase C-terminal like HC341_15780 PF16200 C-terminal region of band_7 HC341_15780 PF01145 SPFH domain / Band 7 family HC341_15790 PF01370 NAD dependent epimerase/dehydratase family HC341_15810 PF01381 Helix-turn-helix HC341_15815 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HC341_15820 PF00989 PAS fold HC341_15825 PF00501 AMP-binding enzyme HC341_15825 PF13193 AMP-binding enzyme C-terminal domain HC341_15830 PF00221 Aromatic amino acid lyase HC341_15835 PF00550 Phosphopantetheine attachment site HC341_15840 PF13193 AMP-binding enzyme C-terminal domain HC341_15840 PF00501 AMP-binding enzyme HC341_15845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HC341_15845 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HC341_15855 PF01471 Putative peptidoglycan binding domain HC341_15855 PF13401 AAA domain HC341_15865 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HC341_15865 PF02563 Polysaccharide biosynthesis/export protein HC341_15865 PF10531 SLBB domain HC341_15875 PF13614 AAA domain HC341_15875 PF02706 Chain length determinant protein HC341_15875 PF13807 G-rich domain on putative tyrosine kinase HC341_15900 PF00535 Glycosyl transferase family 2 HC341_15910 PF04230 Polysaccharide pyruvyl transferase HC341_15920 PF00005 ABC transporter HC341_15920 PF00664 ABC transporter transmembrane region HC341_15945 PF13007 Transposase C of IS166 homeodomain HC341_15945 PF13005 zinc-finger binding domain of transposase IS66 HC341_15945 PF03050 Transposase IS66 family HC341_15945 PF13817 IS66 C-terminal element HC341_15950 PF00535 Glycosyl transferase family 2 HC341_15955 PF00535 Glycosyl transferase family 2 HC341_15975 PF13005 zinc-finger binding domain of transposase IS66 HC341_15975 PF13007 Transposase C of IS166 homeodomain HC341_15975 PF03050 Transposase IS66 family HC341_15975 PF13817 IS66 C-terminal element HC341_15990 PF13537 Glutamine amidotransferase domain HC341_15990 PF00733 Asparagine synthase HC341_15995 PF00534 Glycosyl transferases group 1 HC341_15995 PF13439 Glycosyltransferase Family 4 HC341_16015 PF00534 Glycosyl transferases group 1 HC341_16015 PF13439 Glycosyltransferase Family 4 HC341_16040 PF00535 Glycosyl transferase family 2 HC341_16065 PF13817 IS66 C-terminal element HC341_16065 PF13005 zinc-finger binding domain of transposase IS66 HC341_16065 PF13007 Transposase C of IS166 homeodomain HC341_16065 PF03050 Transposase IS66 family HC341_16080 PF13784 Fic/DOC family N-terminal HC341_16080 PF02661 Fic/DOC family HC341_16090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_16090 PF02895 Signal transducing histidine kinase, homodimeric domain HC341_16090 PF01584 CheW-like domain HC341_16090 PF07194 P2 response regulator binding domain HC341_16090 PF01627 Hpt domain HC341_16095 PF00158 Sigma-54 interaction domain HC341_16095 PF00072 Response regulator receiver domain HC341_16095 PF02954 Bacterial regulatory protein, Fis family HC341_16115 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HC341_16115 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HC341_16115 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HC341_16120 PF02397 Bacterial sugar transferase HC341_16125 PF02938 GAD domain HC341_16125 PF01336 OB-fold nucleic acid binding domain HC341_16125 PF00152 tRNA synthetases class II (D, K and N) HC341_16130 PF00990 Diguanylate cyclase, GGDEF domain HC341_16130 PF07694 5TMR of 5TMR-LYT HC341_16135 PF03707 Bacterial signalling protein N terminal repeat HC341_16135 PF00563 EAL domain HC341_16135 PF00990 Diguanylate cyclase, GGDEF domain HC341_16155 PF00106 short chain dehydrogenase HC341_16175 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HC341_16175 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HC341_16180 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_16180 PF18113 Rubredoxin binding C-terminal domain HC341_16185 PF13847 Methyltransferase domain HC341_16195 PF08281 Sigma-70, region 4 HC341_16195 PF04542 Sigma-70 region 2 HC341_16200 PF13847 Methyltransferase domain HC341_16220 PF06629 MltA-interacting protein MipA HC341_16230 PF01061 ABC-2 type transporter HC341_16235 PF00005 ABC transporter HC341_16245 PF01507 Phosphoadenosine phosphosulfate reductase family HC341_16265 PF02445 Quinolinate synthetase A protein HC341_16285 PF07963 Prokaryotic N-terminal methylation motif HC341_16285 PF00114 Pilin (bacterial filament) HC341_16305 PF05567 Neisseria PilC beta-propeller domain HC341_16310 PF00114 Pilin (bacterial filament) HC341_16310 PF07963 Prokaryotic N-terminal methylation motif HC341_16320 PF02401 LytB protein HC341_16335 PF01252 Signal peptidase (SPase) II HC341_16340 PF00133 tRNA synthetases class I (I, L, M and V) HC341_16340 PF08264 Anticodon-binding domain of tRNA HC341_16340 PF06827 Zinc finger found in FPG and IleRS HC341_16345 PF01687 Riboflavin kinase HC341_16345 PF06574 FAD synthetase HC341_16350 PF03023 Lipid II flippase MurJ HC341_16365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HC341_16365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HC341_16385 PF15887 Putative zinc-binding metallo-peptidase HC341_16385 PF10005 zinc-ribbon domain HC341_16400 PF00342 Phosphoglucose isomerase HC341_16405 PF00483 Nucleotidyl transferase HC341_16410 PF00563 EAL domain HC341_16410 PF00990 Diguanylate cyclase, GGDEF domain HC341_16410 PF03707 Bacterial signalling protein N terminal repeat HC341_16415 PF00459 Inositol monophosphatase family HC341_16420 PF14306 PUA-like domain HC341_16420 PF01747 ATP-sulfurylase HC341_16425 PF03600 Citrate transporter HC341_16425 PF02080 TrkA-C domain HC341_16430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HC341_16430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HC341_16430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HC341_16435 PF01370 NAD dependent epimerase/dehydratase family HC341_16440 PF01268 Formate--tetrahydrofolate ligase HC341_16445 PF12833 Helix-turn-helix domain HC341_16455 PF00380 Ribosomal protein S9/S16 HC341_16460 PF00572 Ribosomal protein L13 HC341_16470 PF02675 S-adenosylmethionine decarboxylase HC341_16475 PF02566 OsmC-like protein HC341_16480 PF13545 Crp-like helix-turn-helix domain HC341_16480 PF00027 Cyclic nucleotide-binding domain HC341_16485 PF00218 Indole-3-glycerol phosphate synthase HC341_16490 PF00591 Glycosyl transferase family, a/b domain HC341_16490 PF02885 Glycosyl transferase family, helical bundle domain HC341_16495 PF00117 Glutamine amidotransferase class-I HC341_16500 PF00425 chorismate binding enzyme HC341_16500 PF04715 Anthranilate synthase component I, N terminal region HC341_16505 PF13419 Haloacid dehalogenase-like hydrolase HC341_16510 PF00834 Ribulose-phosphate 3 epimerase family HC341_16520 PF05099 Tellurite resistance protein TerB HC341_16520 PF00226 DnaJ domain HC341_16530 PF00440 Bacterial regulatory proteins, tetR family HC341_16555 PF01343 Peptidase family S49 HC341_16555 PF08496 Peptidase family S49 N-terminal HC341_16575 PF01206 Sulfurtransferase TusA HC341_16585 PF00561 alpha/beta hydrolase fold HC341_16590 PF00106 short chain dehydrogenase HC341_16595 PF16177 Acetyl-coenzyme A synthetase N-terminus HC341_16595 PF00501 AMP-binding enzyme HC341_16595 PF13193 AMP-binding enzyme C-terminal domain HC341_16600 PF13380 CoA binding domain HC341_16600 PF13607 Succinyl-CoA ligase like flavodoxin domain HC341_16600 PF00583 Acetyltransferase (GNAT) family HC341_16605 PF08447 PAS fold HC341_16605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HC341_16615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HC341_16615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HC341_16620 PF01207 Dihydrouridine synthase (Dus) HC341_16625 PF00226 DnaJ domain HC341_16625 PF05099 Tellurite resistance protein TerB HC341_16635 PF00226 DnaJ domain HC341_16635 PF01556 DnaJ C terminal domain HC341_16635 PF00684 DnaJ central domain HC341_16645 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HC341_16645 PF04055 Radical SAM superfamily HC341_16650 PF02562 PhoH-like protein HC341_16650 PF13638 PIN domain HC341_16660 PF00149 Calcineurin-like phosphoesterase HC341_16680 PF01202 Shikimate kinase HC341_16690 PF00990 Diguanylate cyclase, GGDEF domain HC341_16690 PF03707 Bacterial signalling protein N terminal repeat HC341_16690 PF00563 EAL domain HC341_16700 PF18030 RimK PreATP-grasp domain HC341_16700 PF08443 RimK-like ATP-grasp domain HC341_16705 PF06167 Glucose-regulated metallo-peptidase M90 HC341_16715 PF00009 Elongation factor Tu GTP binding domain HC341_16715 PF03144 Elongation factor Tu domain 2 HC341_16715 PF16658 Class II release factor RF3, C-terminal domain HC341_16720 PF03073 TspO/MBR family HC341_16725 PF03692 Putative zinc- or iron-chelating domain HC341_16730 PF02954 Bacterial regulatory protein, Fis family HC341_16730 PF00072 Response regulator receiver domain HC341_16730 PF00158 Sigma-54 interaction domain HC341_16735 PF00512 His Kinase A (phospho-acceptor) domain HC341_16735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HC341_16745 PF07977 FabA-like domain HC341_16750 PF00109 Beta-ketoacyl synthase, N-terminal domain HC341_16750 PF02801 Beta-ketoacyl synthase, C-terminal domain HC341_16755 PF00691 OmpA family HC341_16755 PF13488 Glycine zipper HC341_16760 PF01040 UbiA prenyltransferase family HC341_16765 PF02628 Cytochrome oxidase assembly protein HC341_16785 PF00510 Cytochrome c oxidase subunit III HC341_16795 PF00115 Cytochrome C and Quinol oxidase polypeptide I HC341_16800 PF02790 Cytochrome C oxidase subunit II, transmembrane domain HC341_16800 PF00116 Cytochrome C oxidase subunit II, periplasmic domain HC341_16815 PF08241 Methyltransferase domain HC341_16820 PF06968 Biotin and Thiamin Synthesis associated domain HC341_16820 PF04055 Radical SAM superfamily HC341_16825 PF00156 Phosphoribosyl transferase domain HC341_16835 PF04542 Sigma-70 region 2 HC341_16835 PF08281 Sigma-70, region 4 HC341_16855 PF00924 Mechanosensitive ion channel HC341_16865 PF01515 Phosphate acetyl/butaryl transferase HC341_16865 PF03949 Malic enzyme, NAD binding domain HC341_16865 PF00390 Malic enzyme, N-terminal domain HC341_16885 PF13439 Glycosyltransferase Family 4 HC341_16885 PF00534 Glycosyl transferases group 1 HC341_16900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HC341_16900 PF01872 RibD C-terminal domain HC341_16905 PF00925 GTP cyclohydrolase II HC341_16920 PF00072 Response regulator receiver domain HC341_16920 PF00990 Diguanylate cyclase, GGDEF domain HC341_16920 PF00563 EAL domain HC341_16925 PF01435 Peptidase family M48 HC341_16930 PF07694 5TMR of 5TMR-LYT HC341_16930 PF00990 Diguanylate cyclase, GGDEF domain HC341_16935 PF12146 Serine aminopeptidase, S33 HC341_16945 PF00890 FAD binding domain HC341_16955 PF00990 Diguanylate cyclase, GGDEF domain HC341_16955 PF17151 Periplasmic sensor domain HC341_16970 PF04717 Type VI secretion system, phage-baseplate injector HC341_17020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HC341_17020 PF07498 Rho termination factor, N-terminal domain HC341_17020 PF07497 Rho termination factor, RNA-binding domain HC341_17025 PF00085 Thioredoxin HC341_17035 PF03958 Bacterial type II/III secretion system short domain HC341_17035 PF00263 Bacterial type II and III secretion system protein HC341_17040 PF00437 Type II/IV secretion system protein HC341_17045 PF00482 Type II secretion system (T2SS), protein F HC341_17050 PF07963 Prokaryotic N-terminal methylation motif HC341_17050 PF08334 Type II secretion system (T2SS), protein G HC341_17055 PF07963 Prokaryotic N-terminal methylation motif HC341_17055 PF12019 Type II transport protein GspH HC341_17060 PF07963 Prokaryotic N-terminal methylation motif HC341_17060 PF02501 Type II secretion system (T2SS), protein I HC341_17065 PF11612 Type II secretion system (T2SS), protein J HC341_17065 PF07963 Prokaryotic N-terminal methylation motif HC341_17070 PF03934 Type II secretion system (T2SS), protein K HC341_17075 PF05134 Type II secretion system (T2SS), protein L HC341_17075 PF12693 GspL periplasmic domain HC341_17090 PF00293 NUDIX domain HC341_17095 PF00459 Inositol monophosphatase family HC341_17105 PF00871 Acetokinase family HC341_17110 PF01515 Phosphate acetyl/butaryl transferase HC341_17130 PF01575 MaoC like domain HC341_17140 PF00005 ABC transporter HC341_17145 PF13472 GDSL-like Lipase/Acylhydrolase family HC341_17150 PF04381 Putative exonuclease, RdgC HC341_17155 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HC341_17155 PF02222 ATP-grasp domain HC341_17160 PF00731 AIR carboxylase HC341_17185 PF00561 alpha/beta hydrolase fold HC341_17185 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HC341_17190 PF04445 Putative SAM-dependent methyltransferase HC341_17195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HC341_17195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HC341_17200 PF08220 DeoR-like helix-turn-helix domain HC341_17200 PF00455 DeoR C terminal sensor domain HC341_17205 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HC341_17205 PF01266 FAD dependent oxidoreductase HC341_17210 PF00230 Major intrinsic protein HC341_17215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HC341_17215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HC341_17220 PF10017 Histidine-specific methyltransferase, SAM-dependent HC341_17230 PF00378 Enoyl-CoA hydratase/isomerase HC341_17230 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HC341_17230 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HC341_17235 PF00171 Aldehyde dehydrogenase family HC341_17250 PF04362 Bacterial Fe(2+) trafficking HC341_17255 PF10576 Iron-sulfur binding domain of endonuclease III HC341_17255 PF00633 Helix-hairpin-helix motif HC341_17255 PF14815 NUDIX domain HC341_17255 PF00730 HhH-GPD superfamily base excision DNA repair protein HC341_17275 PF05690 Thiazole biosynthesis protein ThiG HC341_17275 PF02597 ThiS family HC341_17280 PF05690 Thiazole biosynthesis protein ThiG HC341_17285 PF02390 Putative methyltransferase HC341_17290 PF00248 Aldo/keto reductase family HC341_17300 PF04493 Endonuclease V HC341_17305 PF02954 Bacterial regulatory protein, Fis family HC341_17305 PF00072 Response regulator receiver domain HC341_17305 PF00158 Sigma-54 interaction domain HC341_17325 PF07690 Major Facilitator Superfamily HC341_17330 PF00689 Cation transporting ATPase, C-terminus HC341_17330 PF00690 Cation transporter/ATPase, N-terminus HC341_17340 PF07992 Pyridine nucleotide-disulphide oxidoreductase HC341_17350 PF03372 Endonuclease/Exonuclease/phosphatase family HC341_17355 PF00108 Thiolase, N-terminal domain HC341_17355 PF02803 Thiolase, C-terminal domain HC341_17360 PF00180 Isocitrate/isopropylmalate dehydrogenase HC341_17365 PF00311 Phosphoenolpyruvate carboxylase HC341_17370 PF00156 Phosphoribosyl transferase domain HC341_17375 PF12146 Serine aminopeptidase, S33 HC341_17380 PF12146 Serine aminopeptidase, S33 HC341_17385 PF00365 Phosphofructokinase HC341_17395 PF00696 Amino acid kinase family HC341_17400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HC341_17400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HC341_17400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HC341_17400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HC341_17405 PF00692 dUTPase HC341_17410 PF04127 DNA / pantothenate metabolism flavoprotein HC341_17410 PF02441 Flavoprotein HC341_17415 PF04002 RadC-like JAB domain HC341_17425 PF04545 Sigma-70, region 4 HC341_17425 PF04542 Sigma-70 region 2 HC341_17425 PF00140 Sigma-70 factor, region 1.2 HC341_17430 PF18075 FtsX extracellular domain HC341_17435 PF00005 ABC transporter HC341_17440 PF00448 SRP54-type protein, GTPase domain HC341_17440 PF02881 SRP54-type protein, helical bundle domain HC341_17445 PF00675 Insulinase (Peptidase family M16) HC341_17445 PF05193 Peptidase M16 inactive domain HC341_17450 PF05193 Peptidase M16 inactive domain HC341_17450 PF00675 Insulinase (Peptidase family M16) HC341_17460 PF01467 Cytidylyltransferase-like HC341_17485 PF07317 Flagellar regulator YcgR HC341_17485 PF07238 PilZ domain HC341_17495 PF01272 Transcription elongation factor, GreA/GreB, C-term HC341_17495 PF03449 Transcription elongation factor, N-terminal HC341_17510 PF06827 Zinc finger found in FPG and IleRS HC341_17510 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HC341_17510 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HC341_17530 PF00005 ABC transporter HC341_17535 PF00563 EAL domain HC341_17535 PF08668 HDOD domain HC341_17540 PF00471 Ribosomal protein L33 HC341_17545 PF00830 Ribosomal L28 family HC341_17550 PF00011 Hsp20/alpha crystallin family HC341_17555 PF01556 DnaJ C terminal domain HC341_17555 PF00226 DnaJ domain HC341_17565 PF13180 PDZ domain HC341_17565 PF00595 PDZ domain HC341_17570 PF03544 Gram-negative bacterial TonB protein C-terminal HC341_17575 PF02472 Biopolymer transport protein ExbD/TolR HC341_17580 PF02472 Biopolymer transport protein ExbD/TolR HC341_17585 PF01618 MotA/TolQ/ExbB proton channel family HC341_17610 PF01494 FAD binding domain HC341_17615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HC341_17620 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HC341_17630 PF00294 pfkB family carbohydrate kinase HC341_17630 PF01467 Cytidylyltransferase-like HC341_17635 PF03279 Bacterial lipid A biosynthesis acyltransferase HC341_17685 PF00534 Glycosyl transferases group 1 HC341_17685 PF13439 Glycosyltransferase Family 4 HC341_17690 PF13439 Glycosyltransferase Family 4 HC341_17690 PF00534 Glycosyl transferases group 1 HC341_17700 PF13181 Tetratricopeptide repeat HC341_17705 PF13439 Glycosyltransferase Family 4 HC341_17720 PF00664 ABC transporter transmembrane region HC341_17720 PF00005 ABC transporter HC341_17730 PF01063 Amino-transferase class IV HC341_17735 PF03710 Glutamate-ammonia ligase adenylyltransferase HC341_17735 PF08335 GlnD PII-uridylyltransferase HC341_17740 PF00118 TCP-1/cpn60 chaperonin family HC341_17745 PF00166 Chaperonin 10 Kd subunit HC341_17750 PF03091 CutA1 divalent ion tolerance protein HC341_17755 PF02683 Cytochrome C biogenesis protein transmembrane region HC341_17755 PF11412 Disulphide bond corrector protein DsbC HC341_17760 PF08534 Redoxin HC341_17765 PF01220 Dehydroquinase class II HC341_17770 PF00364 Biotin-requiring enzyme HC341_17775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HC341_17775 PF02785 Biotin carboxylase C-terminal domain HC341_17775 PF00289 Biotin carboxylase, N-terminal domain HC341_17785 PF01925 Sulfite exporter TauE/SafE HC341_17795 PF01966 HD domain HC341_17795 PF01743 Poly A polymerase head domain HC341_17795 PF12627 Probable RNA and SrmB- binding site of polymerase A HC341_17805 PF00072 Response regulator receiver domain HC341_17805 PF00211 Adenylate and Guanylate cyclase catalytic domain HC341_17810 PF00398 Ribosomal RNA adenine dimethylase HC341_17825 PF02660 Glycerol-3-phosphate acyltransferase HC341_17830 PF00814 Glycoprotease family HC341_17835 PF01165 Ribosomal protein S21 HC341_17840 PF09424 Yqey-like protein HC341_17845 PF10410 DnaB-helicase binding domain of primase HC341_17845 PF01807 CHC2 zinc finger HC341_17845 PF08275 DNA primase catalytic core, N-terminal domain HC341_17845 PF08278 DNA primase DnaG DnaB-binding HC341_17850 PF00140 Sigma-70 factor, region 1.2 HC341_17850 PF04546 Sigma-70, non-essential region HC341_17850 PF04542 Sigma-70 region 2 HC341_17850 PF04539 Sigma-70 region 3 HC341_17850 PF04545 Sigma-70, region 4 HC341_17850 PF03979 Sigma-70 factor, region 1.1 HC341_17910 PF00990 Diguanylate cyclase, GGDEF domain HC341_17910 PF00563 EAL domain HC341_17910 PF03707 Bacterial signalling protein N terminal repeat HC341_17915 PF00291 Pyridoxal-phosphate dependent enzyme HC341_17925 PF02690 Na+/Pi-cotransporter HC341_17935 PF00762 Ferrochelatase HC341_17950 PF00072 Response regulator receiver domain HC341_17950 PF00990 Diguanylate cyclase, GGDEF domain HC341_17960 PF00005 ABC transporter HC341_17960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HC341_17965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HC341_17965 PF00005 ABC transporter HC341_17975 PF00528 Binding-protein-dependent transport system inner membrane component HC341_17990 PF01475 Ferric uptake regulator family HC341_17995 PF05343 M42 glutamyl aminopeptidase HC341_18015 PF00743 Flavin-binding monooxygenase-like HC341_18020 PF01513 ATP-NAD kinase HC341_18045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HC341_18045 PF01348 Type II intron maturase HC341_18050 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HC341_18050 PF01348 Type II intron maturase HC341_18055 PF13677 Membrane MotB of proton-channel complex MotA/MotB HC341_18055 PF00691 OmpA family HC341_18070 PF00909 Ammonium Transporter Family HC341_18075 PF00543 Nitrogen regulatory protein P-II HC341_18085 PF01078 Magnesium chelatase, subunit ChlI HC341_18085 PF13335 Magnesium chelatase, subunit ChlI C-terminal HC341_18090 PF00005 ABC transporter HC341_18095 PF00005 ABC transporter HC341_18095 PF12399 Branched-chain amino acid ATP-binding cassette transporter HC341_18105 PF02653 Branched-chain amino acid transport system / permease component HC341_18115 PF02492 CobW/HypB/UreG, nucleotide-binding domain HC341_18120 PF01730 UreF HC341_18125 PF02814 UreE urease accessory protein, N-terminal domain HC341_18125 PF05194 UreE urease accessory protein, C-terminal domain HC341_18130 PF01979 Amidohydrolase family HC341_18130 PF00449 Urease alpha-subunit, N-terminal domain HC341_18135 PF00699 Urease beta subunit HC341_18140 PF00547 Urease, gamma subunit HC341_18145 PF01774 UreD urease accessory protein HC341_18150 PF04955 HupE / UreJ protein HC341_18165 PF03060 Nitronate monooxygenase HC341_18175 PF00501 AMP-binding enzyme HC341_18175 PF13193 AMP-binding enzyme C-terminal domain HC341_18190 PF01636 Phosphotransferase enzyme family HC341_18195 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_18195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_18195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_18205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HC341_18210 PF01546 Peptidase family M20/M25/M40 HC341_18210 PF07687 Peptidase dimerisation domain HC341_18215 PF00135 Carboxylesterase family HC341_18220 PF03480 Bacterial extracellular solute-binding protein, family 7 HC341_18225 PF00881 Nitroreductase family HC341_18255 PF00756 Putative esterase HC341_18260 PF08240 Alcohol dehydrogenase GroES-like domain HC341_18260 PF00107 Zinc-binding dehydrogenase HC341_18265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_18265 PF03466 LysR substrate binding domain HC341_18270 PF00474 Sodium:solute symporter family HC341_18275 PF08448 PAS fold HC341_18275 PF00990 Diguanylate cyclase, GGDEF domain HC341_18275 PF00563 EAL domain HC341_18305 PF00289 Biotin carboxylase, N-terminal domain HC341_18305 PF02785 Biotin carboxylase C-terminal domain HC341_18305 PF00364 Biotin-requiring enzyme HC341_18305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HC341_18305 PF02436 Conserved carboxylase domain HC341_18305 PF00682 HMGL-like HC341_18310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HC341_18345 PF00005 ABC transporter HC341_18350 PF00950 ABC 3 transport family HC341_18355 PF01297 Zinc-uptake complex component A periplasmic HC341_18360 PF02492 CobW/HypB/UreG, nucleotide-binding domain HC341_18360 PF07683 Cobalamin synthesis protein cobW C-terminal domain HC341_18370 PF02492 CobW/HypB/UreG, nucleotide-binding domain HC341_18370 PF07683 Cobalamin synthesis protein cobW C-terminal domain HC341_18395 PF04055 Radical SAM superfamily HC341_18395 PF06463 Molybdenum Cofactor Synthesis C HC341_18400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_18410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_18415 PF02571 Precorrin-6x reductase CbiJ/CobK HC341_18420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_18425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HC341_18430 PF02570 Precorrin-8X methylmutase HC341_18435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HC341_18440 PF01061 ABC-2 type transporter HC341_18445 PF00005 ABC transporter HC341_18450 PF01888 CbiD HC341_18465 PF01593 Flavin containing amine oxidoreductase HC341_18475 PF00561 alpha/beta hydrolase fold HC341_18480 PF00378 Enoyl-CoA hydratase/isomerase HC341_18485 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_18485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_18485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_18490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HC341_18490 PF02770 Acyl-CoA dehydrogenase, middle domain HC341_18490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HC341_18495 PF00501 AMP-binding enzyme HC341_18495 PF13193 AMP-binding enzyme C-terminal domain HC341_18500 PF14403 Circularly permuted ATP-grasp type 2 HC341_18520 PF14403 Circularly permuted ATP-grasp type 2 HC341_18525 PF08379 Bacterial transglutaminase-like N-terminal region HC341_18525 PF01841 Transglutaminase-like superfamily HC341_18530 PF00665 Integrase core domain HC341_18530 PF13936 Helix-turn-helix domain HC341_18550 PF03707 Bacterial signalling protein N terminal repeat HC341_18550 PF00563 EAL domain HC341_18550 PF00990 Diguanylate cyclase, GGDEF domain HC341_18560 PF00085 Thioredoxin HC341_18560 PF01323 DSBA-like thioredoxin domain HC341_18565 PF01578 Cytochrome C assembly protein HC341_18570 PF05140 ResB-like family HC341_18575 PF00034 Cytochrome c HC341_18580 PF01926 50S ribosome-binding GTPase HC341_18585 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HC341_18585 PF01367 5'-3' exonuclease, C-terminal SAM fold HC341_18585 PF01612 3'-5' exonuclease HC341_18585 PF00476 DNA polymerase family A HC341_18595 PF03641 Possible lysine decarboxylase HC341_18605 PF00580 UvrD/REP helicase N-terminal domain HC341_18605 PF13361 UvrD-like helicase C-terminal domain HC341_18610 PF03466 LysR substrate binding domain HC341_18610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HC341_18615 PF00072 Response regulator receiver domain HC341_18615 PF00486 Transcriptional regulatory protein, C terminal HC341_18620 PF01380 SIS domain HC341_18625 PF00582 Universal stress protein family HC341_18630 PF12804 MobA-like NTP transferase domain HC341_18630 PF00132 Bacterial transferase hexapeptide (six repeats) HC341_18635 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HC341_18635 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HC341_18640 PF02874 ATP synthase alpha/beta family, beta-barrel domain HC341_18640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HC341_18645 PF00231 ATP synthase HC341_18650 PF00306 ATP synthase alpha/beta chain, C terminal domain HC341_18650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HC341_18650 PF02874 ATP synthase alpha/beta family, beta-barrel domain HC341_18655 PF00213 ATP synthase delta (OSCP) subunit HC341_18660 PF00430 ATP synthase B/B' CF(0) HC341_18665 PF00137 ATP synthase subunit C HC341_18670 PF00119 ATP synthase A chain HC341_18680 PF17762 HTH domain found in ParB protein HC341_18680 PF02195 ParB-like nuclease domain HC341_18685 PF13614 AAA domain HC341_18690 PF02527 rRNA small subunit methyltransferase G HC341_18695 PF01134 Glucose inhibited division protein A HC341_18695 PF13932 GidA associated domain HC341_18700 PF10396 GTP-binding protein TrmE N-terminus HC341_18700 PF12631 MnmE helical domain HC341_18700 PF01926 50S ribosome-binding GTPase HC341_18705 PF14849 YidC periplasmic domain HC341_18705 PF02096 60Kd inner membrane protein HC341_18710 PF01809 Putative membrane protein insertion efficiency factor HC341_18715 PF00825 Ribonuclease P HC341_18720 PF00468 Ribosomal protein L34