locus-tag	class	description
OJF2_00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
OJF2_00020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_00050	COG3119	arylsulfatase activity
OJF2_00100	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
OJF2_00140	COG0673	inositol 2-dehydrogenase activity
OJF2_00190	COG4932	domain protein
OJF2_00190	COG5492	domain, Protein
OJF2_00210	COG0515	serine threonine protein kinase
OJF2_00250	COG0515	serine threonine protein kinase
OJF2_00290	COG1595	DNA-templated transcription, initiation
OJF2_00310	COG1070	Carbohydrate kinase
OJF2_00330	COG1606	tRNA processing
OJF2_00350	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_00400	COG2205	protein histidine kinase activity
OJF2_00440	COG0515	serine threonine protein kinase
OJF2_00440	COG2815	serine threonine protein kinase
OJF2_00490	COG1151	hydroxylamine reductase activity
OJF2_00520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_00580	COG0745	RESPONSE REGULATOR receiver
OJF2_00600	COG0784	Response regulator, receiver
OJF2_00600	COG2205	protein histidine kinase activity
OJF2_00600	COG5002	protein histidine kinase activity
OJF2_00670	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OJF2_00800	COG3214	Protein conserved in bacteria
OJF2_00820	COG0668	transmembrane transport
OJF2_00830	COG0640	Transcriptional regulator
OJF2_00860	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OJF2_01040	COG2815	serine threonine protein kinase
OJF2_01040	COG0515	serine threonine protein kinase
OJF2_01090	COG0515	serine threonine protein kinase
OJF2_01090	COG2815	serine threonine protein kinase
OJF2_01180	COG4948	Mandelate Racemase Muconate Lactonizing
OJF2_01230	COG0724	RNA recognition motif
OJF2_01400	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
OJF2_01410	COG2201	protein-glutamate methylesterase activity
OJF2_01420	COG2201	protein-glutamate methylesterase activity
OJF2_01600	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OJF2_01610	COG0489	protein tyrosine kinase activity
OJF2_01660	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
OJF2_01700	COG0438	transferase activity, transferring glycosyl groups
OJF2_01720	COG2801	Transposase and inactivated derivatives
OJF2_01720	COG3415	Transposase
OJF2_01730	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
OJF2_01830	COG0563	adenylate kinase activity
OJF2_01910	COG1846	Transcriptional regulator
OJF2_01910	COG0456	acetyltransferase
OJF2_01960	COG2382	esterase
OJF2_01990	COG0235	Class ii aldolase
OJF2_02010	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
OJF2_02020	COG3383	formate dehydrogenase (NAD+) activity
OJF2_02020	COG0243	molybdopterin cofactor binding
OJF2_02030	COG0243	molybdopterin cofactor binding
OJF2_02030	COG3383	formate dehydrogenase (NAD+) activity
OJF2_02040	COG0437	4 iron, 4 sulfur cluster binding
OJF2_02070	COG1032	radical SAM domain protein
OJF2_02090	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OJF2_02220	COG3311	Transcriptional regulator
OJF2_02230	COG1569	PIN domain
OJF2_02310	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_02380	COG3119	arylsulfatase activity
OJF2_02430	COG2815	serine threonine protein kinase
OJF2_02430	COG0515	serine threonine protein kinase
OJF2_02450	COG2198	Histidine kinase
OJF2_02450	COG0643	Histidine kinase
OJF2_02460	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OJF2_02470	COG0840	transmembrane signaling receptor activity
OJF2_02480	COG0835	chemotaxis
OJF2_02540	COG1073	alpha beta
OJF2_02560	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
OJF2_02710	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OJF2_02720	COG2020	methyltransferase activity
OJF2_02740	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OJF2_02740	COG3320	Male sterility
OJF2_02800	COG1937	Protein conserved in bacteria
OJF2_02860	COG2815	serine threonine protein kinase
OJF2_02860	COG0515	serine threonine protein kinase
OJF2_02990	COG0508	dehydrogenase complex catalyzes the overall conversion of
OJF2_03030	COG4221	oxidoreductase activity
OJF2_03060	COG0824	Thioesterase
OJF2_03110	COG0346	lactoylglutathione lyase activity
OJF2_03130	COG1053	succinate dehydrogenase
OJF2_03140	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OJF2_03230	COG0823	Involved in the tonB-independent uptake of proteins
OJF2_03280	COG3604	Transcriptional regulator
OJF2_03290	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
OJF2_03300	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
OJF2_03310	COG4208	sulfate ABC transporter
OJF2_03320	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
OJF2_03360	COG1012	belongs to the aldehyde dehydrogenase family
OJF2_03370	COG0667	Aldo Keto reductase
OJF2_03410	COG0045	succinate-CoA ligase (ADP-forming) activity
OJF2_03410	COG1042	CoA-binding domain protein
OJF2_03410	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OJF2_03420	COG1595	DNA-templated transcription, initiation
OJF2_03450	COG1335	isochorismatase
OJF2_03530	COG2094	Belongs to the DNA glycosylase MPG family
OJF2_03540	COG0515	serine threonine protein kinase
OJF2_03590	COG0840	transmembrane signaling receptor activity
OJF2_03610	COG0835	chemotaxis
OJF2_03660	COG0628	permease
OJF2_03670	COG0515	serine threonine protein kinase
OJF2_03720	COG1271	oxidase subunit
OJF2_03740	COG1943	Transposase
OJF2_03850	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
OJF2_03860	COG1595	DNA-templated transcription, initiation
OJF2_03900	COG1215	transferase activity, transferring glycosyl groups
OJF2_03920	COG0038	chloride channel
OJF2_03940	COG2208	phosphoserine phosphatase activity
OJF2_03950	COG2201	protein-glutamate methylesterase activity
OJF2_04060	COG2207	Transcriptional regulator
OJF2_04060	COG1609	Transcriptional regulator
OJF2_04210	COG1595	DNA-templated transcription, initiation
OJF2_04250	COG3220	belongs to the UPF0276 family
OJF2_04280	COG3265	gluconokinase activity
OJF2_04290	COG0367	asparagine synthase
OJF2_04300	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
OJF2_04360	COG2755	lipolytic protein G-D-S-L family
OJF2_04360	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
OJF2_04440	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OJF2_04470	COG0531	amino acid
OJF2_04530	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OJF2_04550	COG3781	membrane
OJF2_04560	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
OJF2_04580	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OJF2_04650	COG1595	DNA-templated transcription, initiation
OJF2_04700	COG2066	Belongs to the glutaminase family
OJF2_04760	COG0037	tRNA processing
OJF2_04760	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
OJF2_04780	COG0438	transferase activity, transferring glycosyl groups
OJF2_04790	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OJF2_04830	COG2815	serine threonine protein kinase
OJF2_04830	COG0515	serine threonine protein kinase
OJF2_04870	COG1595	DNA-templated transcription, initiation
OJF2_04880	COG1830	Aldolase
OJF2_04920	COG2197	response regulator
OJF2_04950	COG2197	response regulator
OJF2_05080	COG3684	Belongs to the aldolase LacD family
OJF2_05100	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
OJF2_05110	COG0517	IMP dehydrogenase activity
OJF2_05110	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
OJF2_05150	COG3831	ATPase activity
OJF2_05380	COG0457	Tetratricopeptide repeat
OJF2_05380	COG0463	Glycosyl transferase, family 2
OJF2_05420	COG0438	transferase activity, transferring glycosyl groups
OJF2_05480	COG1518	maintenance of DNA repeat elements
OJF2_05490	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
OJF2_05550	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OJF2_05950	COG1595	DNA-templated transcription, initiation
OJF2_05980	COG0673	inositol 2-dehydrogenase activity
OJF2_06030	COG0070	glutamate synthase
OJF2_06030	COG0067	glutamate synthase
OJF2_06030	COG0069	glutamate synthase activity
OJF2_06050	COG2308	Evidence 4 Homologs of previously reported genes of
OJF2_06080	COG2308	Evidence 4 Homologs of previously reported genes of
OJF2_06080	COG2307	Protein conserved in bacteria
OJF2_06090	COG1305	Transglutaminase-like
OJF2_06100	COG3609	addiction module antidote protein, CC2985 family
OJF2_06120	COG0430	RNA-3'-phosphate cyclase activity
OJF2_06160	COG5002	protein histidine kinase activity
OJF2_06230	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OJF2_06240	COG0673	inositol 2-dehydrogenase activity
OJF2_06320	COG1446	asparaginase
OJF2_06360	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_06370	COG1595	DNA-templated transcription, initiation
OJF2_06390	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
OJF2_06410	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
OJF2_06450	COG2815	serine threonine protein kinase
OJF2_06450	COG0515	serine threonine protein kinase
OJF2_06540	COG0203	ribosomal protein L17
OJF2_06550	COG0202	RNA polymerase activity
OJF2_06560	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
OJF2_06570	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
OJF2_06580	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
OJF2_06590	COG0257	Belongs to the bacterial ribosomal protein bL36 family
OJF2_06660	COG0024	Methionine aminopeptidase
OJF2_06670	COG0201	protein transport
OJF2_06680	COG0200	Binds to the 23S rRNA
OJF2_06690	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
OJF2_06700	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
OJF2_06710	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
OJF2_06720	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
OJF2_06730	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
OJF2_06740	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
OJF2_06750	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
OJF2_06770	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
OJF2_06780	COG0255	Belongs to the universal ribosomal protein uL29 family
OJF2_06790	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
OJF2_06800	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
OJF2_06810	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
OJF2_06820	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
OJF2_06830	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
OJF2_06840	COG0089	rRNA binding
OJF2_06850	COG0088	Forms part of the polypeptide exit tunnel
OJF2_06860	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
OJF2_06870	COG0051	transcription antitermination factor activity, RNA binding
OJF2_07010	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OJF2_07010	COG0515	serine threonine protein kinase
OJF2_07080	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OJF2_07140	COG2815	serine threonine protein kinase
OJF2_07140	COG0515	serine threonine protein kinase
OJF2_07160	COG1733	regulation of RNA biosynthetic process
OJF2_07180	COG1309	transcriptional regulator
OJF2_07190	COG1064	alcohol dehydrogenase
OJF2_07230	COG0667	Aldo Keto reductase
OJF2_07300	COG2815	serine threonine protein kinase
OJF2_07300	COG0515	serine threonine protein kinase
OJF2_07310	COG0673	inositol 2-dehydrogenase activity
OJF2_07440	COG4191	Histidine kinase
OJF2_07530	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_07590	COG0501	Belongs to the peptidase M48B family
OJF2_07660	COG0515	serine threonine protein kinase
OJF2_07660	COG0457	Tetratricopeptide repeat
OJF2_07670	COG0673	inositol 2-dehydrogenase activity
OJF2_07680	COG3693	PFAM glycoside hydrolase, family 10
OJF2_07680	COG2382	esterase
OJF2_07730	COG1309	transcriptional regulator
OJF2_07740	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_07750	COG1131	(ABC) transporter
OJF2_07760	COG0842	Transport permease protein
OJF2_07770	COG0842	Transport permease protein
OJF2_07810	COG0515	serine threonine protein kinase
OJF2_07810	COG2815	serine threonine protein kinase
OJF2_07900	COG0640	Transcriptional regulator
OJF2_07920	COG0515	serine threonine protein kinase
OJF2_07920	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OJF2_07950	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_07960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OJF2_07970	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_07980	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_08150	COG0416	fatty acid biosynthetic process
OJF2_08160	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OJF2_08300	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_08390	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
OJF2_08400	COG2814	Major facilitator Superfamily
OJF2_08420	COG3852	Histidine kinase
OJF2_08430	COG2204	response regulator
OJF2_08470	COG0612	Peptidase, M16
OJF2_08500	COG1595	DNA-templated transcription, initiation
OJF2_08550	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_08590	COG2204	response regulator
OJF2_08640	COG0515	serine threonine protein kinase
OJF2_08640	COG2815	serine threonine protein kinase
OJF2_08650	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OJF2_08710	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
OJF2_08720	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OJF2_08810	COG0438	transferase activity, transferring glycosyl groups
OJF2_08880	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OJF2_08920	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
OJF2_08950	COG0673	inositol 2-dehydrogenase activity
OJF2_08990	COG1595	DNA-templated transcription, initiation
OJF2_09030	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
OJF2_09090	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OJF2_09110	COG0546	phosphoglycolate phosphatase activity
OJF2_09170	COG1725	Transcriptional regulator
OJF2_09180	COG1131	(ABC) transporter
OJF2_09240	COG0326	Molecular chaperone. Has ATPase activity
OJF2_09260	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OJF2_09260	COG4651	solute:proton antiporter activity
OJF2_09340	COG1595	DNA-templated transcription, initiation
OJF2_09360	COG0085	RNA polymerase activity
OJF2_09370	COG0222	ribosome binding
OJF2_09380	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
OJF2_09390	COG0081	regulation of translation
OJF2_09400	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
OJF2_09410	COG0250	Participates in transcription elongation, termination and antitermination
OJF2_09440	COG0267	Belongs to the bacterial ribosomal protein bL33 family
OJF2_09450	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
OJF2_09520	COG1858	cytochrome C peroxidase
OJF2_09530	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OJF2_09540	COG2201	protein-glutamate methylesterase activity
OJF2_09550	COG0840	transmembrane signaling receptor activity
OJF2_09580	COG0643	Histidine kinase
OJF2_09580	COG2198	Histidine kinase
OJF2_09720	COG0463	Glycosyl transferase, family 2
OJF2_09840	COG2738	Putative neutral zinc metallopeptidase
OJF2_09850	COG0412	Dienelactone hydrolase
OJF2_09930	COG0631	protein serine/threonine phosphatase activity
OJF2_09940	COG0564	pseudouridine synthase activity
OJF2_10020	COG0515	serine threonine protein kinase
OJF2_10020	COG2815	serine threonine protein kinase
OJF2_10050	COG2223	nitrite transmembrane transporter activity
OJF2_10060	COG0561	phosphatase activity
OJF2_10110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_10160	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OJF2_10200	COG2319	Wd-40 repeat
OJF2_10200	COG4249	Peptidase C14 caspase catalytic subunit p20
OJF2_10210	COG2319	Wd-40 repeat
OJF2_10210	COG4249	Peptidase C14 caspase catalytic subunit p20
OJF2_10280	COG2183	response to ionizing radiation
OJF2_10290	COG0577	efflux transmembrane transporter activity
OJF2_10290	COG1136	(ABC) transporter
OJF2_10300	COG1136	(ABC) transporter
OJF2_10320	COG5002	protein histidine kinase activity
OJF2_10450	COG0483	inositol monophosphate 1-phosphatase activity
OJF2_10480	COG1725	Transcriptional regulator
OJF2_10560	COG2165	general secretion pathway protein
OJF2_10620	COG0154	amidase activity
OJF2_10650	COG0714	Associated with various cellular activities
OJF2_10740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_10790	COG3795	YCII-related domain
OJF2_10800	COG3708	Transcriptional regulator
OJF2_10800	COG2207	Transcriptional regulator
OJF2_10860	COG0616	signal peptide processing
OJF2_10920	COG2267	carboxylic ester hydrolase activity
OJF2_10930	COG0300	oxidoreductase activity
OJF2_10940	COG2226	methyltransferase
OJF2_10950	COG2226	methyltransferase
OJF2_10960	COG0577	efflux transmembrane transporter activity
OJF2_11000	COG4191	Histidine kinase
OJF2_11050	COG2897	thiosulfate sulfurtransferase activity
OJF2_11080	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
OJF2_11090	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
OJF2_11110	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_11160	COG0514	ATP-dependent DNA helicase (RecQ)
OJF2_11190	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OJF2_11190	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
OJF2_11210	COG0673	inositol 2-dehydrogenase activity
OJF2_11240	COG2815	serine threonine protein kinase
OJF2_11240	COG0515	serine threonine protein kinase
OJF2_11260	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OJF2_11320	COG3831	ATPase activity
OJF2_11340	COG3552	Protein containing von Willebrand factor type A (VWA) domain
OJF2_11360	COG0714	Associated with various cellular activities
OJF2_11370	COG0404	The glycine cleavage system catalyzes the degradation of glycine
OJF2_11380	COG0509	glycine decarboxylation via glycine cleavage system
OJF2_11390	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
OJF2_11400	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
OJF2_11440	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_11450	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_11460	COG0667	Aldo Keto reductase
OJF2_11520	COG0612	Peptidase, M16
OJF2_11530	COG0612	Peptidase, M16
OJF2_11540	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OJF2_11590	COG0515	serine threonine protein kinase
OJF2_11600	COG0204	Acyl-transferase
OJF2_11600	COG0318	PFAM AMP-dependent synthetase and ligase
OJF2_11610	COG0622	Phosphoesterase
OJF2_11620	COG0367	asparagine synthase
OJF2_11650	COG1959	2 iron, 2 sulfur cluster binding
OJF2_11670	COG0626	cystathionine gamma-synthase activity
OJF2_11690	COG2855	membrane
OJF2_11710	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
OJF2_11710	COG1918	ferrous iron import across plasma membrane
OJF2_11750	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
OJF2_11850	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OJF2_11860	COG0405	Gamma-glutamyltransferase
OJF2_11880	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
OJF2_11930	COG2815	serine threonine protein kinase
OJF2_11930	COG0515	serine threonine protein kinase
OJF2_11950	COG0321	lipoyl(octanoyl) transferase activity
OJF2_11950	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OJF2_11960	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OJF2_11970	COG5297	Belongs to the glycosyl hydrolase family 6
OJF2_11970	COG3250	beta-galactosidase activity
OJF2_12020	COG0688	phosphatidylethanolamine metabolic process
OJF2_12040	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_12050	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_12080	COG2382	esterase
OJF2_12090	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OJF2_12100	COG2080	2 iron, 2 sulfur cluster binding
OJF2_12110	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OJF2_12120	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
OJF2_12220	COG3795	YCII-related domain
OJF2_12230	COG3795	YCII-related domain
OJF2_12250	COG2304	oxidoreductase activity
OJF2_12260	COG4941	Belongs to the sigma-70 factor family
OJF2_12270	COG2194	sulfuric ester hydrolase activity
OJF2_12350	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OJF2_12370	COG0347	Belongs to the P(II) protein family
OJF2_12410	COG0544	peptidyl-prolyl cis-trans isomerase activity
OJF2_12420	COG0740	serine-type endopeptidase activity
OJF2_12430	COG0740	serine-type endopeptidase activity
OJF2_12450	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
OJF2_12470	COG1335	isochorismatase
OJF2_12520	COG2815	serine threonine protein kinase
OJF2_12520	COG0515	serine threonine protein kinase
OJF2_12560	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OJF2_12660	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OJF2_12670	COG0295	cytidine deaminase activity
OJF2_12680	COG1192	Involved in chromosome partitioning
OJF2_12730	COG0693	protein deglycase activity
OJF2_12740	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OJF2_12780	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_12790	COG2815	serine threonine protein kinase
OJF2_12790	COG0515	serine threonine protein kinase
OJF2_12840	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OJF2_12860	COG0442	prolyl-tRNA aminoacylation
OJF2_12900	COG1131	(ABC) transporter
OJF2_12920	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
OJF2_12970	COG0745	RESPONSE REGULATOR receiver
OJF2_12980	COG2267	carboxylic ester hydrolase activity
OJF2_13010	COG0438	transferase activity, transferring glycosyl groups
OJF2_13010	COG1216	Glycosyl transferase, family 2
OJF2_13020	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
OJF2_13030	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
OJF2_13050	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OJF2_13060	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OJF2_13120	COG0561	phosphatase activity
OJF2_13220	COG3119	arylsulfatase activity
OJF2_13280	COG1032	radical SAM domain protein
OJF2_13300	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
OJF2_13310	COG0242	peptide deformylase activity
OJF2_13390	COG0204	Acyl-transferase
OJF2_13390	COG0318	PFAM AMP-dependent synthetase and ligase
OJF2_13450	COG5487	UPF0391 membrane protein
OJF2_13490	COG0515	serine threonine protein kinase
OJF2_13490	COG2815	serine threonine protein kinase
OJF2_13500	COG0072	phenylalanine-tRNA ligase activity
OJF2_13510	COG0531	amino acid
OJF2_13530	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
OJF2_13540	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
OJF2_13550	COG0291	Belongs to the bacterial ribosomal protein bL35 family
OJF2_13600	COG4864	UPF0365 protein
OJF2_13640	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OJF2_13660	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OJF2_13680	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
OJF2_13690	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
OJF2_13740	COG0673	inositol 2-dehydrogenase activity
OJF2_13760	COG3481	metal-dependent phosphohydrolase, HD sub domain
OJF2_13820	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OJF2_13850	COG2321	neutral zinc metallopeptidase
OJF2_13870	COG0742	ribosomal rna small subunit methyltransferase
OJF2_13880	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OJF2_13880	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OJF2_13880	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OJF2_13940	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_14330	COG0697	spore germination
OJF2_14340	COG0697	spore germination
OJF2_14350	COG0697	spore germination
OJF2_14360	COG1522	sequence-specific DNA binding
OJF2_14390	COG0653	protein targeting
OJF2_14560	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OJF2_14590	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
OJF2_14630	COG0557	exoribonuclease II activity
OJF2_14640	COG3267	Type II secretory pathway component ExeA
OJF2_14640	COG3409	Peptidoglycan-binding domain 1 protein
OJF2_14760	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
OJF2_14770	COG0205	6-phosphofructokinase activity
OJF2_14790	COG0515	serine threonine protein kinase
OJF2_14790	COG2815	serine threonine protein kinase
OJF2_14800	COG1090	epimerase
OJF2_14810	COG2267	carboxylic ester hydrolase activity
OJF2_14820	COG3963	phosphatidate phosphatase activity
OJF2_15000	COG1475	DNA binding
OJF2_15030	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
OJF2_15040	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
OJF2_15050	COG1832	CoA-binding protein
OJF2_15090	COG1216	Glycosyl transferase, family 2
OJF2_15130	COG0571	ribonuclease III activity
OJF2_15150	COG3118	belongs to the thioredoxin family
OJF2_15160	COG0387	Pfam Sodium calcium exchanger
OJF2_15180	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_15190	COG0305	Participates in initiation and elongation during chromosome replication
OJF2_15190	COG0358	DNA primase activity
OJF2_15210	COG3781	membrane
OJF2_15250	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
OJF2_15270	COG0436	Aminotransferase
OJF2_15280	COG0217	transcriptional regulatory protein
OJF2_15300	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
OJF2_15320	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
OJF2_15330	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
OJF2_15330	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
OJF2_15340	COG0195	Participates in both transcription termination and antitermination
OJF2_15350	COG0084	hydrolase, TatD family'
OJF2_15370	COG0602	queuosine metabolic process
OJF2_15390	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OJF2_15400	COG1940	carbohydrate kinase activity
OJF2_15500	COG0653	protein targeting
OJF2_15520	COG0812	UDP-N-acetylmuramate dehydrogenase activity
OJF2_15550	COG0598	Magnesium transport protein CorA
OJF2_15590	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OJF2_15600	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
OJF2_15620	COG1024	Enoyl-CoA hydratase
OJF2_15690	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
OJF2_15700	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OJF2_15750	COG5433	transposase activity
OJF2_15790	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OJF2_15800	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
OJF2_15810	COG0515	serine threonine protein kinase
OJF2_15810	COG2815	serine threonine protein kinase
OJF2_15840	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OJF2_15840	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OJF2_15890	COG0542	response to heat
OJF2_15910	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OJF2_15940	COG2409	Drug exporters of the RND superfamily
OJF2_15960	COG0820	rRNA (adenine-C2-)-methyltransferase activity
OJF2_15980	COG0436	Aminotransferase
OJF2_16000	COG4956	integral membrane protein (PIN domain superfamily)
OJF2_16030	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OJF2_16040	COG0574	Belongs to the PEP-utilizing enzyme family
OJF2_16040	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OJF2_16100	COG0824	Thioesterase
OJF2_16190	COG0564	pseudouridine synthase activity
OJF2_16200	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OJF2_16210	COG0577	efflux transmembrane transporter activity
OJF2_16210	COG1136	(ABC) transporter
OJF2_16220	COG1136	(ABC) transporter
OJF2_16290	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
OJF2_16300	COG1051	belongs to the nudix hydrolase family
OJF2_16370	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OJF2_16400	COG3119	arylsulfatase activity
OJF2_16470	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
OJF2_16490	COG0745	RESPONSE REGULATOR receiver
OJF2_16530	COG0643	Histidine kinase
OJF2_16530	COG2198	Histidine kinase
OJF2_16540	COG0840	transmembrane signaling receptor activity
OJF2_16540	COG3290	protein histidine kinase activity
OJF2_16580	COG0277	FAD linked oxidase domain protein
OJF2_16580	COG0247	lactate metabolic process
OJF2_16670	COG2217	Heavy metal translocating P-type atpase
OJF2_16730	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
OJF2_16760	COG0463	Glycosyl transferase, family 2
OJF2_16780	COG0705	Rhomboid family
OJF2_16800	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
OJF2_16810	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
OJF2_16830	COG0704	Plays a role in the regulation of phosphate uptake
OJF2_16850	COG2815	serine threonine protein kinase
OJF2_16850	COG0515	serine threonine protein kinase
OJF2_16860	COG2313	pseudouridylate synthase activity
OJF2_16930	COG1446	asparaginase
OJF2_16990	COG0515	serine threonine protein kinase
OJF2_17060	COG0525	valine-tRNA ligase activity
OJF2_17070	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OJF2_17110	COG0071	Belongs to the small heat shock protein (HSP20) family
OJF2_17160	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
OJF2_17170	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
OJF2_17190	COG0693	protein deglycase activity
OJF2_17200	COG2115	Belongs to the xylose isomerase family
OJF2_17240	COG0673	inositol 2-dehydrogenase activity
OJF2_17270	COG0864	Transcriptional regulator
OJF2_17310	COG3501	Rhs element vgr protein
OJF2_17330	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
OJF2_17390	COG2304	oxidoreductase activity
OJF2_17480	COG0631	protein serine/threonine phosphatase activity
OJF2_17530	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
OJF2_17560	COG1011	Hydrolase
OJF2_17590	COG0750	zinc metalloprotease
OJF2_17610	COG2197	response regulator
OJF2_17620	COG3706	GGDEF domain
OJF2_17620	COG0745	RESPONSE REGULATOR receiver
OJF2_17760	COG0628	permease
OJF2_17790	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OJF2_17810	COG0742	ribosomal rna small subunit methyltransferase
OJF2_17820	COG0617	tRNA 3'-terminal CCA addition
OJF2_17830	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
OJF2_17880	COG0826	peptidase U32
OJF2_17930	COG0805	protein transport
OJF2_17950	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
OJF2_17990	COG0402	S-adenosylhomocysteine deaminase activity
OJF2_18000	COG1668	transmembrane transport
OJF2_18010	COG4555	ABC transporter
OJF2_18020	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
OJF2_18060	COG1858	cytochrome C peroxidase
OJF2_18090	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
OJF2_18110	COG2208	phosphoserine phosphatase activity
OJF2_18160	COG0673	inositol 2-dehydrogenase activity
OJF2_18170	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OJF2_18180	COG0504	CTP synthase activity
OJF2_18190	COG1716	ATPase activity
OJF2_18220	COG3209	COG3209 Rhs family protein
OJF2_18250	COG3501	Rhs element vgr protein
OJF2_18270	COG1959	2 iron, 2 sulfur cluster binding
OJF2_18310	COG0535	radical SAM domain protein
OJF2_18400	COG1482	cell wall glycoprotein biosynthetic process
OJF2_18410	COG0714	Associated with various cellular activities
OJF2_18420	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
OJF2_18430	COG1305	Transglutaminase-like
OJF2_18440	COG0012	GTP binding
OJF2_18570	COG0667	Aldo Keto reductase
OJF2_18630	COG1490	D-aminoacyl-tRNA deacylase activity
OJF2_18640	COG1069	ribulokinase activity
OJF2_18660	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
OJF2_18670	COG2205	protein histidine kinase activity
OJF2_18720	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OJF2_18760	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OJF2_18790	COG0154	amidase activity
OJF2_18800	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
OJF2_18810	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
OJF2_18840	COG1335	isochorismatase
OJF2_18850	COG0406	alpha-ribazole phosphatase activity
OJF2_18860	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
OJF2_18890	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
OJF2_18930	COG0367	asparagine synthase
OJF2_18980	COG0667	Aldo Keto reductase
OJF2_18990	COG0793	Belongs to the peptidase S41A family
OJF2_19080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_19080	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_19090	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OJF2_19110	COG3132	Protein of unknown function, DUF480
OJF2_19160	COG0745	RESPONSE REGULATOR receiver
OJF2_19180	COG0649	NAD binding
OJF2_19180	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_19190	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_19220	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_19240	COG0839	Belongs to the complex I subunit 6 family
OJF2_19250	COG0713	ATP synthesis coupled electron transport
OJF2_19260	COG1007	ATP synthesis coupled electron transport
OJF2_19300	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
OJF2_19320	COG4585	Histidine kinase
OJF2_19340	COG0673	inositol 2-dehydrogenase activity
OJF2_19390	COG0022	dehydrogenase e1 component
OJF2_19400	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OJF2_19410	COG0508	dehydrogenase complex catalyzes the overall conversion of
OJF2_19560	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OJF2_19580	COG0783	Belongs to the Dps family
OJF2_19600	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
OJF2_19610	COG1480	7TM receptor with intracellular HD hydrolase
OJF2_19620	COG1702	phosphate starvation-inducible protein PhoH
OJF2_19630	COG4589	Belongs to the CDS family
OJF2_19640	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
OJF2_19650	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
OJF2_19690	COG0505	Belongs to the CarA family
OJF2_19720	COG3842	ATPase activity
OJF2_19740	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_19770	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_19820	COG2183	response to ionizing radiation
OJF2_19820	COG0539	negative regulation of cytoplasmic translation
OJF2_19890	COG1122	ATPase activity
OJF2_19960	COG3842	ATPase activity
OJF2_20000	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OJF2_20020	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OJF2_20130	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
OJF2_20170	COG0515	serine threonine protein kinase
OJF2_20170	COG2815	serine threonine protein kinase
OJF2_20220	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OJF2_20230	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
OJF2_20240	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
OJF2_20260	COG1595	DNA-templated transcription, initiation
OJF2_20270	COG1105	Belongs to the carbohydrate kinase PfkB family
OJF2_20300	COG1131	(ABC) transporter
OJF2_20320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_20340	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_20380	COG0174	glutamine synthetase
OJF2_20430	COG2814	Major facilitator Superfamily
OJF2_20460	COG1172	Belongs to the binding-protein-dependent transport system permease family
OJF2_20470	COG1129	ABC transporter
OJF2_20480	COG1879	ABC-type sugar transport system periplasmic component
OJF2_20500	COG3622	Belongs to the hyi family
OJF2_20620	COG2255	four-way junction helicase activity
OJF2_20650	COG0673	inositol 2-dehydrogenase activity
OJF2_20660	COG0196	riboflavin kinase activity
OJF2_20730	COG1566	PFAM secretion protein HlyD family protein
OJF2_20760	COG1902	pentaerythritol trinitrate reductase activity
OJF2_20800	COG0673	inositol 2-dehydrogenase activity
OJF2_20830	COG1725	Transcriptional regulator
OJF2_20840	COG1131	(ABC) transporter
OJF2_20860	COG0673	inositol 2-dehydrogenase activity
OJF2_20930	COG1666	GTP binding
OJF2_20960	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
OJF2_20970	COG2070	2-Nitropropane dioxygenase
OJF2_20980	COG0259	pyridoxamine-phosphate oxidase activity
OJF2_21020	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OJF2_21020	COG0515	serine threonine protein kinase
OJF2_21050	COG2199	diguanylate cyclase activity
OJF2_21050	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
OJF2_21060	COG0515	serine threonine protein kinase
OJF2_21060	COG2815	serine threonine protein kinase
OJF2_21160	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OJF2_21190	COG0586	Pfam SNARE associated Golgi protein
OJF2_21200	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_21210	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OJF2_21220	COG0723	plastoquinol--plastocyanin reductase activity
OJF2_21230	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OJF2_21300	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
OJF2_21320	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
OJF2_21330	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OJF2_21340	COG0745	RESPONSE REGULATOR receiver
OJF2_21380	COG0138	bifunctional purine biosynthesis protein purh
OJF2_21430	COG0314	molybdopterin synthase activity
OJF2_21440	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
OJF2_21470	COG4948	Mandelate Racemase Muconate Lactonizing
OJF2_21480	COG0727	PFAM Uncharacterised protein family (UPF0153)
OJF2_21580	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OJF2_21580	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OJF2_21650	COG0488	(ABC) transporter
OJF2_21700	COG0280	phosphate acetyltransferase
OJF2_21710	COG0446	pyridine nucleotide-disulphide oxidoreductase
OJF2_21750	COG0517	IMP dehydrogenase activity
OJF2_21750	COG1125	glycine betaine transport
OJF2_21770	COG2211	Major facilitator Superfamily
OJF2_21860	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
OJF2_21940	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
OJF2_21980	COG3852	Histidine kinase
OJF2_22080	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OJF2_22110	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OJF2_22140	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_22170	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OJF2_22250	COG1692	metallophosphoesterase
OJF2_22260	COG1418	mRNA catabolic process
OJF2_22410	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OJF2_22420	COG0220	tRNA (guanine-N7-)-methyltransferase activity
OJF2_22430	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
OJF2_22440	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
OJF2_22470	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_22480	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_22490	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_22500	COG0649	NAD binding
OJF2_22530	COG1034	ATP synthesis coupled electron transport
OJF2_22540	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
OJF2_22550	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
OJF2_22580	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OJF2_22600	COG1007	ATP synthesis coupled electron transport
OJF2_22890	COG1595	DNA-templated transcription, initiation
OJF2_22920	COG0667	Aldo Keto reductase
OJF2_22940	COG3875	lactate racemase activity
OJF2_23050	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
OJF2_23050	COG4651	solute:proton antiporter activity
OJF2_23060	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
OJF2_23070	COG4591	ABC-type transport system involved in lipoprotein release permease component
OJF2_23080	COG1136	(ABC) transporter
OJF2_23110	COG0494	nUDIX hydrolase
OJF2_23170	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OJF2_23170	COG1796	DNA polymerase
OJF2_23270	COG4948	Mandelate Racemase Muconate Lactonizing
OJF2_23280	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OJF2_23640	COG0166	Belongs to the GPI family
OJF2_23690	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OJF2_23700	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
OJF2_23730	COG1074	ATP-dependent DNA helicase activity
OJF2_23770	COG0457	Tetratricopeptide repeat
OJF2_23790	COG0563	adenylate kinase activity
OJF2_23810	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
OJF2_23880	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_23930	COG0673	inositol 2-dehydrogenase activity
OJF2_23960	COG1525	nuclease
OJF2_24010	COG1051	belongs to the nudix hydrolase family
OJF2_24060	COG5002	protein histidine kinase activity
OJF2_24150	COG0463	Glycosyl transferase, family 2
OJF2_24180	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
OJF2_24230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_24270	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OJF2_24270	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
OJF2_24270	COG0674	pyruvate-flavodoxin oxidoreductase activity
OJF2_24270	COG1013	pyruvate-flavodoxin oxidoreductase activity
OJF2_24280	COG0167	dihydroorotate dehydrogenase activity
OJF2_24290	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OJF2_24310	COG2208	phosphoserine phosphatase activity
OJF2_24350	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OJF2_24360	COG0673	inositol 2-dehydrogenase activity
OJF2_24370	COG0233	cytoplasmic translational termination
OJF2_24390	COG1902	pentaerythritol trinitrate reductase activity
OJF2_24400	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OJF2_24420	COG1678	Uncharacterized ACR, COG1678
OJF2_24450	COG3869	Catalyzes the specific phosphorylation of arginine residues in
OJF2_24470	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
OJF2_24520	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
OJF2_24530	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
OJF2_24530	COG0758	DNA mediated transformation
OJF2_24580	COG0714	Associated with various cellular activities
OJF2_24620	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
OJF2_24640	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OJF2_24650	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OJF2_24660	COG1215	transferase activity, transferring glycosyl groups
OJF2_24670	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
OJF2_24680	COG0126	phosphoglycerate kinase activity
OJF2_24680	COG0149	triose-phosphate isomerase activity
OJF2_24720	COG1891	lyase activity
OJF2_24770	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OJF2_24780	COG3002	Belongs to the UPF0753 family
OJF2_25020	COG3250	beta-galactosidase activity
OJF2_25060	COG3537	Alpha-1,2-mannosidase
OJF2_25080	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
OJF2_25090	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OJF2_25130	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OJF2_25140	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OJF2_25150	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OJF2_25150	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
OJF2_25160	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_25170	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_25250	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OJF2_25280	COG0114	fumarate hydratase activity
OJF2_25300	COG1201	RNA secondary structure unwinding
OJF2_25340	COG2815	serine threonine protein kinase
OJF2_25340	COG0515	serine threonine protein kinase
OJF2_25360	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OJF2_25380	COG1355	regulation of microtubule-based process
OJF2_25400	COG0268	Binds directly to 16S ribosomal RNA
OJF2_25460	COG0023	Translation Initiation Factor
OJF2_25470	COG1966	Carbon starvation protein
OJF2_25480	COG0531	amino acid
OJF2_25520	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
OJF2_25550	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OJF2_25560	COG0583	DNA-binding transcription factor activity
OJF2_25570	COG0069	glutamate synthase activity
OJF2_25570	COG0070	glutamate synthase
OJF2_25570	COG0067	glutamate synthase
OJF2_25640	COG0584	glycerophosphoryl diester phosphodiesterase
OJF2_25650	COG0004	ammonium transporteR
OJF2_25660	COG0004	ammonium transporteR
OJF2_25680	COG0475	glutathione-regulated potassium exporter activity
OJF2_25740	COG3481	metal-dependent phosphohydrolase, HD sub domain
OJF2_25830	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
OJF2_25840	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
OJF2_25870	COG3706	GGDEF domain
OJF2_25870	COG0745	RESPONSE REGULATOR receiver
OJF2_25880	COG1994	Peptidase M50
OJF2_25920	COG4990	cell redox homeostasis
OJF2_25920	COG3591	Belongs to the peptidase S1B family
OJF2_25940	COG0284	orotidine-5'-phosphate decarboxylase activity
OJF2_25970	COG2322	membrane
OJF2_25990	COG1845	cytochrome c oxidase, subunit III
OJF2_26000	COG0109	protoheme IX farnesyltransferase activity
OJF2_26020	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
OJF2_26030	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OJF2_26070	COG0355	proton-transporting ATP synthase activity, rotational mechanism
OJF2_26080	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
OJF2_26090	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
OJF2_26100	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
OJF2_26140	COG0356	it plays a direct role in the translocation of protons across the membrane
OJF2_26200	COG0724	RNA recognition motif
OJF2_26220	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OJF2_26240	COG1091	dTDP-4-dehydrorhamnose reductase activity
OJF2_26250	COG0531	amino acid
OJF2_26290	COG2304	oxidoreductase activity
OJF2_26310	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
OJF2_26340	COG1381	Involved in DNA repair and RecF pathway recombination
OJF2_26410	COG2239	Acts as a magnesium transporter
OJF2_26430	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
OJF2_26550	COG0714	Associated with various cellular activities
OJF2_26600	COG2378	regulation of single-species biofilm formation
OJF2_26630	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
OJF2_26650	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_26660	COG4974	Belongs to the 'phage' integrase family
OJF2_26680	COG0515	serine threonine protein kinase
OJF2_26680	COG2815	serine threonine protein kinase
OJF2_26770	COG2226	methyltransferase
OJF2_26800	COG0457	Tetratricopeptide repeat
OJF2_26800	COG0515	serine threonine protein kinase
OJF2_26810	COG3534	alpha-L-arabinofuranosidase
OJF2_26820	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
OJF2_26830	COG0124	histidyl-tRNA synthetase
OJF2_26840	COG0124	histidyl-tRNA synthetase
OJF2_26850	COG1595	DNA-templated transcription, initiation
OJF2_26870	COG1063	alcohol dehydrogenase
OJF2_26880	COG0656	L-ascorbic acid biosynthetic process
OJF2_26940	COG4154	Belongs to the RbsD FucU family
OJF2_26960	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OJF2_26970	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_26970	COG0706	membrane insertase activity
OJF2_26990	COG1214	PFAM Peptidase M22, glycoprotease
OJF2_27000	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
OJF2_27040	COG0827	DNA restriction-modification system
OJF2_27060	COG0497	DNA recombination
OJF2_27100	COG0305	Participates in initiation and elongation during chromosome replication
OJF2_27110	COG0359	binds to the 23S rRNA
OJF2_27120	COG0629	single-stranded DNA binding
OJF2_27140	COG0193	aminoacyl-tRNA hydrolase activity
OJF2_27150	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
OJF2_27280	COG1716	ATPase activity
OJF2_27310	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_27340	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OJF2_27420	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OJF2_27440	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OJF2_27440	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OJF2_27550	COG0463	Glycosyl transferase, family 2
OJF2_27560	COG0297	glycogen (starch) synthase activity
OJF2_27630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_27720	COG1162	GTPase activity
OJF2_27740	COG0071	Belongs to the small heat shock protein (HSP20) family
OJF2_27780	COG4149	molybdate abc transporter
OJF2_27800	COG2815	serine threonine protein kinase
OJF2_27800	COG0515	serine threonine protein kinase
OJF2_27830	COG2814	Major facilitator Superfamily
OJF2_27900	COG1959	2 iron, 2 sulfur cluster binding
OJF2_27910	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
OJF2_27920	COG0459	protein refolding
OJF2_27930	COG0745	RESPONSE REGULATOR receiver
OJF2_28010	COG0673	inositol 2-dehydrogenase activity
OJF2_28020	COG0297	glycogen (starch) synthase activity
OJF2_28030	COG0463	Glycosyl transferase, family 2
OJF2_28030	COG1216	Glycosyl transferase, family 2
OJF2_28140	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_28180	COG3706	GGDEF domain
OJF2_28230	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_28400	COG2894	cell division
OJF2_28460	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
OJF2_28560	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OJF2_28570	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_28620	COG0724	RNA recognition motif
OJF2_28650	COG0705	Rhomboid family
OJF2_28730	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
OJF2_28740	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
OJF2_28750	COG0237	dephospho-CoA kinase activity
OJF2_28770	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OJF2_28770	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OJF2_28860	COG3590	peptidase
OJF2_28920	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
OJF2_28960	COG0612	Peptidase, M16
OJF2_28990	COG1228	amidohydrolase
OJF2_29090	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
OJF2_29120	COG1253	flavin adenine dinucleotide binding
OJF2_29130	COG0247	lactate metabolic process
OJF2_29140	COG1139	Iron-sulfur cluster binding protein
OJF2_29150	COG1556	Lactate utilization protein
OJF2_29260	COG0673	inositol 2-dehydrogenase activity
OJF2_29380	COG5297	Belongs to the glycosyl hydrolase family 6
OJF2_29380	COG3250	beta-galactosidase activity
OJF2_29390	COG2814	Major facilitator Superfamily
OJF2_29400	COG1940	carbohydrate kinase activity
OJF2_29430	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
OJF2_29440	COG2084	Dehydrogenase
OJF2_29460	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OJF2_29480	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
OJF2_29490	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
OJF2_29510	COG0673	inositol 2-dehydrogenase activity
OJF2_29570	COG1216	Glycosyl transferase, family 2
OJF2_29600	COG0825	malonyl-CoA metabolic process
OJF2_29680	COG2186	Transcriptional regulator
OJF2_29720	COG0584	glycerophosphoryl diester phosphodiesterase
OJF2_29860	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
OJF2_29910	COG2815	serine threonine protein kinase
OJF2_29910	COG0515	serine threonine protein kinase
OJF2_29980	COG2271	Major facilitator Superfamily
OJF2_30000	COG0745	RESPONSE REGULATOR receiver
OJF2_30010	COG5002	protein histidine kinase activity
OJF2_30050	COG1056	cytidyltransferase-related domain
OJF2_30050	COG3172	ATPase kinase involved in NAD metabolism
OJF2_30070	COG0463	Glycosyl transferase, family 2
OJF2_30110	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
OJF2_30110	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
OJF2_30120	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
OJF2_30140	COG1793	dna ligase
OJF2_30140	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
OJF2_30170	COG0515	serine threonine protein kinase
OJF2_30170	COG2815	serine threonine protein kinase
OJF2_30210	COG0656	L-ascorbic acid biosynthetic process
OJF2_30220	COG0531	amino acid
OJF2_30240	COG0484	heat shock protein binding
OJF2_30270	COG0594	ribonuclease P activity
OJF2_30280	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
OJF2_30290	COG3345	alpha-galactosidase
OJF2_30320	COG0247	lactate metabolic process
OJF2_30320	COG0277	FAD linked oxidase domain protein
OJF2_30460	COG1741	Belongs to the pirin family
OJF2_30500	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_30540	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
OJF2_30590	COG3119	arylsulfatase activity
OJF2_30610	COG3541	Predicted nucleotidyltransferase
OJF2_30640	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OJF2_30640	COG2205	protein histidine kinase activity
OJF2_30670	COG2172	sigma factor antagonist activity
OJF2_30680	COG1366	Belongs to the anti-sigma-factor antagonist family
OJF2_30690	COG1366	Belongs to the anti-sigma-factor antagonist family
OJF2_30700	COG2205	protein histidine kinase activity
OJF2_30700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OJF2_30790	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
OJF2_30800	COG1993	acr, cog1993
OJF2_30810	COG2045	Belongs to the ComB family
OJF2_30820	COG0423	glycine-tRNA ligase activity
OJF2_30930	COG2258	MOSC domain
OJF2_30960	COG2815	serine threonine protein kinase
OJF2_30960	COG0515	serine threonine protein kinase
OJF2_31060	COG1595	DNA-templated transcription, initiation
OJF2_31070	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
OJF2_31080	COG0049	tRNA binding
OJF2_31140	COG0489	protein tyrosine kinase activity
OJF2_31170	COG0436	Aminotransferase
OJF2_31300	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OJF2_31310	COG2304	oxidoreductase activity
OJF2_31350	COG0714	Associated with various cellular activities
OJF2_31370	COG0457	Tetratricopeptide repeat
OJF2_31370	COG0463	Glycosyl transferase, family 2
OJF2_31430	COG3119	arylsulfatase activity
OJF2_31540	COG1201	RNA secondary structure unwinding
OJF2_31550	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_31610	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_31870	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OJF2_31890	COG0366	Alpha amylase catalytic
OJF2_31930	COG0133	tryptophan synthase activity
OJF2_31940	COG0159	tryptophan synthase activity
OJF2_31950	COG0515	serine threonine protein kinase
OJF2_31950	COG2815	serine threonine protein kinase
OJF2_32010	COG0667	Aldo Keto reductase
OJF2_32080	COG1598	PFAM Uncharacterised protein family UPF0150
OJF2_32100	COG0367	asparagine synthase
OJF2_32210	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
OJF2_32220	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_32340	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
OJF2_32390	COG5002	protein histidine kinase activity
OJF2_32390	COG2205	protein histidine kinase activity
OJF2_32390	COG0784	Response regulator, receiver
OJF2_32400	COG1595	DNA-templated transcription, initiation
OJF2_32430	COG4974	Belongs to the 'phage' integrase family
OJF2_32440	COG2204	response regulator
OJF2_32450	COG0427	acetyl-CoA hydrolase
OJF2_32460	COG0028	Belongs to the TPP enzyme family
OJF2_32490	COG2223	nitrite transmembrane transporter activity
OJF2_32520	COG2146	nitrite reductase [NAD(P)H] activity
OJF2_32530	COG1233	COG1233 Phytoene dehydrogenase and related
OJF2_32580	COG4191	Histidine kinase
OJF2_32590	COG2204	response regulator
OJF2_32630	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
OJF2_32700	COG3119	arylsulfatase activity
OJF2_32810	COG0577	efflux transmembrane transporter activity
OJF2_32810	COG1136	(ABC) transporter
OJF2_32820	COG2832	Protein of unknown function (DUF454)
OJF2_32830	COG0531	amino acid
OJF2_32850	COG2755	lipolytic protein G-D-S-L family
OJF2_32850	COG0657	acetylesterase activity
OJF2_32900	COG2205	protein histidine kinase activity
OJF2_32910	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
OJF2_32990	COG0531	amino acid
OJF2_33030	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_33060	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
OJF2_33070	COG2814	Major facilitator Superfamily
OJF2_33090	COG3228	Belongs to the MtfA family
OJF2_33100	COG2078	PFAM AMMECR1 domain protein
OJF2_33150	COG0438	transferase activity, transferring glycosyl groups
OJF2_33160	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_33170	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
OJF2_33180	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
OJF2_33180	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
OJF2_33200	COG2192	nodulation
OJF2_33250	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_33270	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OJF2_33290	COG3546	catalase activity
OJF2_33310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OJF2_33350	COG0243	molybdopterin cofactor binding
OJF2_33390	COG0543	2 iron, 2 sulfur cluster binding
OJF2_33400	COG1187	pseudouridine synthase activity
OJF2_33420	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
OJF2_33430	COG0375	protein maturation
OJF2_33440	COG0746	molybdenum cofactor guanylyltransferase activity
OJF2_33450	COG0298	carbon dioxide binding
OJF2_33540	COG4821	SIS domain
OJF2_33550	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_33560	COG0251	oxidation-reduction process
OJF2_33590	COG4585	Histidine kinase
OJF2_33640	COG2815	serine threonine protein kinase
OJF2_33640	COG0515	serine threonine protein kinase
OJF2_33690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_33740	COG3119	arylsulfatase activity
OJF2_33750	COG0668	transmembrane transport
OJF2_33780	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
OJF2_33790	COG0309	Hydrogenase expression formation protein (HypE)
OJF2_33820	COG0076	glutamate decarboxylase activity
OJF2_33840	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OJF2_33860	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OJF2_33920	COG0457	Tetratricopeptide repeat
OJF2_33920	COG0515	serine threonine protein kinase
OJF2_33950	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
OJF2_33980	COG0477	Major facilitator Superfamily
OJF2_34010	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_34020	COG0515	serine threonine protein kinase
OJF2_34100	COG0546	phosphoglycolate phosphatase activity
OJF2_34110	COG3142	Participates in the control of copper homeostasis
OJF2_34130	COG0515	serine threonine protein kinase
OJF2_34130	COG2815	serine threonine protein kinase
OJF2_34200	COG0612	Peptidase, M16
OJF2_34270	COG1881	PFAM PEBP family protein
OJF2_34380	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_34390	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
OJF2_34390	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
OJF2_34760	COG3852	Histidine kinase
OJF2_34770	COG2208	phosphoserine phosphatase activity
OJF2_34790	COG0300	oxidoreductase activity
OJF2_34840	COG2382	esterase
OJF2_34850	COG0616	signal peptide processing
OJF2_34870	COG1131	(ABC) transporter
OJF2_34950	COG1132	(ABC) transporter
OJF2_34980	COG1309	transcriptional regulator
OJF2_35050	COG3706	GGDEF domain
OJF2_35070	COG3852	Histidine kinase
OJF2_35130	COG0515	serine threonine protein kinase
OJF2_35130	COG2815	serine threonine protein kinase
OJF2_35170	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
OJF2_35190	COG5492	domain, Protein
OJF2_35190	COG4932	domain protein
OJF2_35230	COG1764	response to oxidative stress
OJF2_35370	COG1595	DNA-templated transcription, initiation
OJF2_35390	COG3394	polysaccharide catabolic process
OJF2_35430	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
OJF2_35430	COG5479	isomerase activity
OJF2_35460	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OJF2_35540	COG2815	serine threonine protein kinase
OJF2_35540	COG0515	serine threonine protein kinase
OJF2_35620	COG3591	Belongs to the peptidase S1B family
OJF2_35620	COG1864	DNA RNA non-specific endonuclease
OJF2_35630	COG1215	transferase activity, transferring glycosyl groups
OJF2_35650	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
OJF2_35670	COG0793	Belongs to the peptidase S41A family
OJF2_35680	COG1793	dna ligase
OJF2_35720	COG2801	Transposase and inactivated derivatives
OJF2_35720	COG3415	Transposase
OJF2_35970	COG4804	nuclease activity
OJF2_36070	COG0142	geranyltranstransferase activity
OJF2_36090	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
OJF2_36100	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
OJF2_36120	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OJF2_36130	COG2124	cytochrome p450
OJF2_36180	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OJF2_36230	COG0745	RESPONSE REGULATOR receiver
OJF2_36250	COG2076	Multidrug Resistance protein
OJF2_36360	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OJF2_36410	COG1595	DNA-templated transcription, initiation
OJF2_36540	COG1943	Transposase
OJF2_36560	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
OJF2_36710	COG1012	belongs to the aldehyde dehydrogenase family
OJF2_36720	COG2852	Protein conserved in bacteria
OJF2_36740	COG2814	Major facilitator Superfamily
OJF2_36790	COG1704	LemA family
OJF2_36830	COG3938	Belongs to the proline racemase family
OJF2_36840	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OJF2_36920	COG2271	Major facilitator Superfamily
OJF2_36940	COG0673	inositol 2-dehydrogenase activity
OJF2_37010	COG0183	Belongs to the thiolase family
OJF2_37050	COG3243	poly(R)-hydroxyalkanoic acid synthase
OJF2_37070	COG0673	inositol 2-dehydrogenase activity
OJF2_37080	COG0439	Biotin carboxylase
OJF2_37090	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
OJF2_37110	COG1703	isobutyryl-CoA mutase activity
OJF2_37160	COG1609	Transcriptional regulator
OJF2_37160	COG2207	Transcriptional regulator
OJF2_37200	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_37220	COG0287	Prephenate dehydrogenase
OJF2_37240	COG1172	Belongs to the binding-protein-dependent transport system permease family
OJF2_37250	COG1129	ABC transporter
OJF2_37260	COG1172	Belongs to the binding-protein-dependent transport system permease family
OJF2_37370	COG2815	serine threonine protein kinase
OJF2_37370	COG0515	serine threonine protein kinase
OJF2_37400	COG4946	Tricorn protease homolog
OJF2_37400	COG0793	Belongs to the peptidase S41A family
OJF2_37420	COG5002	protein histidine kinase activity
OJF2_37610	COG0515	serine threonine protein kinase
OJF2_37610	COG2815	serine threonine protein kinase
OJF2_37620	COG2815	serine threonine protein kinase
OJF2_37620	COG0515	serine threonine protein kinase
OJF2_37630	COG1278	Cold shock
OJF2_37800	COG0702	epimerase
OJF2_37830	COG3046	protein related to deoxyribodipyrimidine photolyase
OJF2_37840	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
OJF2_37920	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
OJF2_38030	COG4717	serine-type aminopeptidase activity
OJF2_38050	COG0420	3'-5' exonuclease activity
OJF2_38060	COG2815	serine threonine protein kinase
OJF2_38060	COG0515	serine threonine protein kinase
OJF2_38130	COG5002	protein histidine kinase activity
OJF2_38140	COG0784	Response regulator, receiver
OJF2_38150	COG4251	negative regulation of phosphorylation
OJF2_38220	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
OJF2_38240	COG1078	dGTPase activity
OJF2_38260	COG0534	Mate efflux family protein
OJF2_38280	COG0515	serine threonine protein kinase
OJF2_38280	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OJF2_38290	COG0134	indole-3-glycerol-phosphate synthase activity
OJF2_38390	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OJF2_38390	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OJF2_38400	COG3952	Lipid A Biosynthesis
OJF2_38400	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OJF2_38410	COG1215	transferase activity, transferring glycosyl groups
OJF2_38470	COG1215	transferase activity, transferring glycosyl groups
OJF2_38580	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OJF2_38590	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OJF2_38640	COG0656	L-ascorbic acid biosynthetic process
OJF2_38690	COG2239	Acts as a magnesium transporter
OJF2_38700	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
OJF2_38710	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
OJF2_38850	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OJF2_38860	COG3494	Protein of unknown function (DUF1009)
OJF2_38930	COG0148	phosphopyruvate hydratase activity
OJF2_39050	COG1760	l-serine dehydratase
OJF2_39180	COG0179	Fumarylacetoacetate (FAA) hydrolase
OJF2_39320	COG0793	Belongs to the peptidase S41A family
OJF2_39460	COG2801	Transposase and inactivated derivatives
OJF2_39460	COG3415	Transposase
OJF2_39560	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
OJF2_39580	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OJF2_39650	COG0515	serine threonine protein kinase
OJF2_39650	COG2815	serine threonine protein kinase
OJF2_39840	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OJF2_39850	COG0261	This protein binds to 23S rRNA in the presence of protein L20
OJF2_39990	COG3609	addiction module antidote protein, CC2985 family
OJF2_40050	COG2205	protein histidine kinase activity
OJF2_40050	COG2198	Histidine kinase
OJF2_40050	COG0784	Response regulator, receiver
OJF2_40070	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
OJF2_40080	COG5002	protein histidine kinase activity
OJF2_40080	COG0784	Response regulator, receiver
OJF2_40100	COG2815	serine threonine protein kinase
OJF2_40100	COG0515	serine threonine protein kinase
OJF2_40180	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OJF2_40230	COG0515	serine threonine protein kinase
OJF2_40230	COG2815	serine threonine protein kinase
OJF2_40250	COG4977	sequence-specific DNA binding
OJF2_40340	COG4372	Transposase
OJF2_40360	COG3436	PFAM IS66 Orf2 family protein
OJF2_40500	COG0657	acetylesterase activity
OJF2_40500	COG2755	lipolytic protein G-D-S-L family
OJF2_40510	COG2815	serine threonine protein kinase
OJF2_40510	COG0515	serine threonine protein kinase
OJF2_40580	COG4804	nuclease activity
OJF2_40610	COG0811	peptide transport
OJF2_40680	COG0076	glutamate decarboxylase activity
OJF2_40730	COG4585	Histidine kinase
OJF2_40840	COG0318	PFAM AMP-dependent synthetase and ligase
OJF2_40910	COG2226	methyltransferase
OJF2_40960	COG1869	D-ribose catabolic process
OJF2_41030	COG1595	DNA-templated transcription, initiation
OJF2_41050	COG1064	alcohol dehydrogenase
OJF2_41060	COG2130	NADP-dependent
OJF2_41130	COG2706	6-phosphogluconolactonase activity
OJF2_41150	COG0501	Belongs to the peptidase M48B family
OJF2_41240	COG1331	Highly conserved protein containing a thioredoxin domain
OJF2_41270	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
OJF2_41280	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
OJF2_41300	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OJF2_41340	COG1598	PFAM Uncharacterised protein family UPF0150
OJF2_41560	COG0473	3-isopropylmalate dehydrogenase activity
OJF2_41690	COG2877	3-deoxy-8-phosphooctulonate synthase activity
OJF2_41790	COG0596	Alpha beta hydrolase
OJF2_41820	COG0419	ATPase involved in DNA repair
OJF2_41940	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OJF2_42020	COG2815	serine threonine protein kinase
OJF2_42020	COG0515	serine threonine protein kinase
OJF2_42050	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_42160	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
OJF2_42230	COG2326	polyphosphate kinase activity
OJF2_42240	COG3609	addiction module antidote protein, CC2985 family
OJF2_42250	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
OJF2_42270	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_42310	COG0515	serine threonine protein kinase
OJF2_42310	COG2815	serine threonine protein kinase
OJF2_42330	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
OJF2_42390	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OJF2_42400	COG0778	Nitroreductase
OJF2_42420	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OJF2_42440	COG2205	protein histidine kinase activity
OJF2_42440	COG0784	Response regulator, receiver
OJF2_42440	COG5002	protein histidine kinase activity
OJF2_42450	COG0784	Response regulator, receiver
OJF2_42450	COG2205	protein histidine kinase activity
OJF2_42590	COG1090	epimerase
OJF2_42720	COG0640	Transcriptional regulator
OJF2_42740	COG0483	inositol monophosphate 1-phosphatase activity
OJF2_42810	COG4453	Protein conserved in bacteria
OJF2_42880	COG1609	Transcriptional regulator
OJF2_42880	COG2207	Transcriptional regulator
OJF2_42890	COG1085	galactose-1-phosphate uridylyltransferase
OJF2_42900	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
OJF2_42920	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
OJF2_43010	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
OJF2_43040	COG1987	bacterial-type flagellum assembly
OJF2_43070	COG1012	belongs to the aldehyde dehydrogenase family
OJF2_43080	COG0667	Aldo Keto reductase
OJF2_43090	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OJF2_43110	COG0515	serine threonine protein kinase
OJF2_43110	COG2815	serine threonine protein kinase
OJF2_43150	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
OJF2_43160	COG1419	protein localization to endoplasmic reticulum
OJF2_43190	COG1191	sigma factor activity
OJF2_43230	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OJF2_43240	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
OJF2_43250	COG5002	protein histidine kinase activity
OJF2_43260	COG5001	Diguanylate cyclase
OJF2_43280	COG2165	general secretion pathway protein
OJF2_43310	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OJF2_43330	COG0302	gtp cyclohydrolase
OJF2_43360	COG0247	lactate metabolic process
OJF2_43470	COG0488	(ABC) transporter
OJF2_43490	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
OJF2_43530	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
OJF2_43550	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_43630	COG3119	arylsulfatase activity
OJF2_43710	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
OJF2_43750	COG1598	PFAM Uncharacterised protein family UPF0150
OJF2_43780	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OJF2_43780	COG0674	pyruvate-flavodoxin oxidoreductase activity
OJF2_43790	COG0753	catalase activity
OJF2_43820	COG0667	Aldo Keto reductase
OJF2_43830	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OJF2_43880	COG3119	arylsulfatase activity
OJF2_43900	COG0552	protein localization to endoplasmic reticulum
OJF2_43920	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
OJF2_43960	COG0348	domain, Protein
OJF2_43970	COG0673	inositol 2-dehydrogenase activity
OJF2_44000	COG0515	serine threonine protein kinase
OJF2_44000	COG2815	serine threonine protein kinase
OJF2_44050	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
OJF2_44070	COG1450	Type ii and iii secretion system protein
OJF2_44130	COG1459	type II secretion system
OJF2_44140	COG4968	Prepilin-type N-terminal cleavage methylation domain
OJF2_44190	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_44220	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OJF2_44260	COG3527	Alpha-acetolactate decarboxylase
OJF2_44290	COG1595	DNA-templated transcription, initiation
OJF2_44310	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OJF2_44320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_44410	COG0484	heat shock protein binding
OJF2_44440	COG2801	Transposase and inactivated derivatives
OJF2_44440	COG3415	Transposase
OJF2_44450	COG1921	L-seryl-tRNASec selenium transferase activity
OJF2_44560	COG0217	transcriptional regulatory protein
OJF2_44600	COG0148	phosphopyruvate hydratase activity
OJF2_44620	COG0673	inositol 2-dehydrogenase activity
OJF2_44680	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OJF2_44720	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_44740	COG3685	Protein conserved in bacteria
OJF2_44800	COG1063	alcohol dehydrogenase
OJF2_44810	COG3387	PFAM Glycoside hydrolase 15-related
OJF2_44820	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
OJF2_44890	COG0724	RNA recognition motif
OJF2_44910	COG1295	ribonuclease BN
OJF2_44930	COG0181	hydroxymethylbilane synthase activity
OJF2_44940	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OJF2_44950	COG1595	DNA-templated transcription, initiation
OJF2_44960	COG0820	rRNA (adenine-C2-)-methyltransferase activity
OJF2_45160	COG4251	negative regulation of phosphorylation
OJF2_45170	COG0596	Alpha beta hydrolase
OJF2_45190	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
OJF2_45420	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
OJF2_45470	COG4106	trans-aconitate 2-methyltransferase activity
OJF2_45520	COG1131	(ABC) transporter
OJF2_45560	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OJF2_45690	COG2274	protein secretion by the type I secretion system
OJF2_45730	COG0515	serine threonine protein kinase
OJF2_45730	COG0457	Tetratricopeptide repeat
OJF2_45750	COG0396	ATPase activity
OJF2_45760	COG0719	Fe-S assembly protein
OJF2_45770	COG0719	Fe-S assembly protein
OJF2_45780	COG2897	thiosulfate sulfurtransferase activity
OJF2_45860	COG2204	response regulator
OJF2_45910	COG0673	inositol 2-dehydrogenase activity
OJF2_45930	COG0861	Integral membrane protein TerC family
OJF2_45940	COG1477	protein flavinylation
OJF2_45980	COG0242	peptide deformylase activity
OJF2_45990	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
OJF2_46010	COG1597	lipid kinase activity
OJF2_46060	COG1331	Highly conserved protein containing a thioredoxin domain
OJF2_46090	COG0793	Belongs to the peptidase S41A family
OJF2_46100	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
OJF2_46160	COG0697	spore germination
OJF2_46170	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_46210	COG3552	Protein containing von Willebrand factor type A (VWA) domain
OJF2_46230	COG0714	Associated with various cellular activities
OJF2_46260	COG1355	regulation of microtubule-based process
OJF2_46310	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
OJF2_46360	COG0113	porphobilinogen synthase activity
OJF2_46370	COG1530	ribonuclease E activity
OJF2_46390	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OJF2_46400	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OJF2_46410	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OJF2_46430	COG1620	l-lactate permease
OJF2_46580	COG1196	nuclear chromosome segregation
OJF2_46580	COG3264	Mechanosensitive ion channel
OJF2_46600	COG1797	cobyrinic acid a,c-diamide synthase activity
OJF2_46610	COG0457	Tetratricopeptide repeat
OJF2_46620	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
OJF2_46620	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
OJF2_46650	COG0556	nucleotide-excision repair
OJF2_46680	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_46700	COG1012	belongs to the aldehyde dehydrogenase family
OJF2_46730	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
OJF2_46830	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_46930	COG0469	pyruvate kinase activity
OJF2_46980	COG2186	Transcriptional regulator
OJF2_47040	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OJF2_47050	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
OJF2_47060	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_47070	COG0180	Tryptophanyl-tRNA synthetase
OJF2_47110	COG0515	serine threonine protein kinase
OJF2_47110	COG2815	serine threonine protein kinase
OJF2_47120	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
OJF2_47190	COG1160	GTP binding
OJF2_47240	COG0686	Belongs to the AlaDH PNT family
OJF2_47310	COG0577	efflux transmembrane transporter activity
OJF2_47310	COG1136	(ABC) transporter
OJF2_47330	COG0300	oxidoreductase activity
OJF2_47340	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_47360	COG0156	8-amino-7-oxononanoate synthase activity
OJF2_47370	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
OJF2_47400	COG1136	(ABC) transporter
OJF2_47400	COG0577	efflux transmembrane transporter activity
OJF2_47410	COG0577	efflux transmembrane transporter activity
OJF2_47430	COG2815	serine threonine protein kinase
OJF2_47430	COG0515	serine threonine protein kinase
OJF2_47480	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OJF2_47550	COG1802	Transcriptional regulator
OJF2_47560	COG1119	ATPase activity
OJF2_47620	COG0745	RESPONSE REGULATOR receiver
OJF2_47630	COG0642	Histidine kinase
OJF2_47660	COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase activity
OJF2_47670	COG0165	Argininosuccinate lyase
OJF2_47680	COG0019	diaminopimelate decarboxylase activity
OJF2_47700	COG2204	response regulator
OJF2_47770	COG0515	serine threonine protein kinase
OJF2_47800	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
OJF2_47800	COG1648	precorrin-2 dehydrogenase activity
OJF2_47830	COG0527	aspartate kinase activity
OJF2_47850	COG0137	argininosuccinate synthase activity
OJF2_47870	COG0202	RNA polymerase activity
OJF2_47880	COG0343	queuine tRNA-ribosyltransferase activity
OJF2_47890	COG1862	Preprotein translocase
OJF2_47900	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OJF2_47970	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_48020	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
OJF2_48030	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OJF2_48050	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_48090	COG1505	serine-type exopeptidase activity
OJF2_48120	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_48120	COG0515	serine threonine protein kinase
OJF2_48130	COG3876	Protein conserved in bacteria
OJF2_48200	COG0515	serine threonine protein kinase
OJF2_48200	COG0457	Tetratricopeptide repeat
OJF2_48230	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OJF2_48240	COG0154	amidase activity
OJF2_48250	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OJF2_48300	COG1566	PFAM secretion protein HlyD family protein
OJF2_48310	COG1136	(ABC) transporter
OJF2_48380	COG1657	PFAM Prenyltransferase squalene oxidase
OJF2_48490	COG1595	DNA-templated transcription, initiation
OJF2_48510	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OJF2_48520	COG0508	dehydrogenase complex catalyzes the overall conversion of
OJF2_48560	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
OJF2_48580	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
OJF2_48600	COG1078	dGTPase activity
OJF2_48670	COG1546	Belongs to the CinA family
OJF2_48670	COG1058	Belongs to the CinA family
OJF2_48710	COG2264	protein methyltransferase activity
OJF2_48730	COG0443	Heat shock 70 kDa protein
OJF2_48920	COG0745	RESPONSE REGULATOR receiver
OJF2_48930	COG3437	response regulator, receiver
OJF2_48930	COG3850	Histidine kinase
OJF2_48930	COG4999	Histidine kinase
OJF2_48930	COG2205	protein histidine kinase activity
OJF2_48950	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OJF2_49040	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OJF2_49080	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
OJF2_49140	COG3119	arylsulfatase activity
OJF2_49150	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OJF2_49200	COG1671	Belongs to the UPF0178 family
OJF2_49230	COG1131	(ABC) transporter
OJF2_49270	COG1450	Type ii and iii secretion system protein
OJF2_49320	COG4638	Rieske (2fe-2S)
OJF2_49340	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
OJF2_49350	COG0440	acetolactate synthase activity
OJF2_49380	COG1131	(ABC) transporter
OJF2_49420	COG3706	GGDEF domain
OJF2_49430	COG0784	Response regulator, receiver
OJF2_49430	COG2205	protein histidine kinase activity
OJF2_49430	COG5002	protein histidine kinase activity
OJF2_49460	COG1215	transferase activity, transferring glycosyl groups
OJF2_49480	COG0726	polysaccharide deacetylase
OJF2_49500	COG1215	transferase activity, transferring glycosyl groups
OJF2_49530	COG1215	transferase activity, transferring glycosyl groups
OJF2_49590	COG0714	Associated with various cellular activities
OJF2_49670	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OJF2_49680	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
OJF2_49690	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_49740	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OJF2_49770	COG0482	sulfurtransferase activity
OJF2_49800	COG0220	tRNA (guanine-N7-)-methyltransferase activity
OJF2_49870	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
OJF2_49880	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
OJF2_49890	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
OJF2_49940	COG2107	Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2)
OJF2_49950	COG1859	Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
OJF2_49990	COG2890	protein-(glutamine-N5) methyltransferase activity
OJF2_50000	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
OJF2_50010	COG0254	rRNA binding
OJF2_50040	COG0753	catalase activity
OJF2_50180	COG2154	pterin-4-alpha-carbinolamine dehydratase
OJF2_50240	COG1250	3-hydroxyacyl-CoA dehydrogenase
OJF2_50240	COG1024	Enoyl-CoA hydratase
OJF2_50610	COG1690	Belongs to the RtcB family
OJF2_51030	COG1783	phage Terminase large subunit
OJF2_51070	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OJF2_51130	COG1061	Type III restriction enzyme res subunit
OJF2_51700	COG1475	DNA binding
OJF2_51880	COG1351	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NAD(P)H and FADH(2) as the reductant
OJF2_51980	COG0039	L-malate dehydrogenase activity
OJF2_51990	COG0235	Class ii aldolase
OJF2_52040	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
OJF2_52060	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
OJF2_52070	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
OJF2_52080	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
OJF2_52090	COG4869	propanediol catabolic process
OJF2_52200	COG2814	Major facilitator Superfamily
OJF2_52210	COG2205	protein histidine kinase activity
OJF2_52220	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OJF2_52250	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
OJF2_52260	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OJF2_52300	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OJF2_52310	COG0508	dehydrogenase complex catalyzes the overall conversion of
OJF2_52310	COG0022	dehydrogenase e1 component
OJF2_52320	COG0508	dehydrogenase complex catalyzes the overall conversion of
OJF2_52330	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OJF2_52390	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
OJF2_52430	COG0459	protein refolding
OJF2_52440	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
OJF2_52450	COG0459	protein refolding
OJF2_52480	COG0673	inositol 2-dehydrogenase activity
OJF2_52490	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
OJF2_52530	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
OJF2_52540	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
OJF2_52550	COG0538	isocitrate dehydrogenase activity
OJF2_52560	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
OJF2_52590	COG1104	cysteine desulfurase activity
OJF2_52600	COG0316	Belongs to the HesB IscA family
OJF2_52640	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
OJF2_52660	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OJF2_52670	COG0228	four-way junction DNA binding
OJF2_52680	COG0336	Belongs to the RNA methyltransferase TrmD family
OJF2_52690	COG0335	large ribosomal subunit rRNA binding
OJF2_52720	COG0438	transferase activity, transferring glycosyl groups
OJF2_52730	COG0277	FAD linked oxidase domain protein
OJF2_52750	COG0277	FAD linked oxidase domain protein
OJF2_52760	COG0247	lactate metabolic process
OJF2_52770	COG2224	Isocitrate lyase
OJF2_52780	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
OJF2_52790	COG0583	DNA-binding transcription factor activity
OJF2_52800	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
OJF2_52870	COG0583	DNA-binding transcription factor activity
OJF2_52880	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OJF2_52890	COG3002	Belongs to the UPF0753 family
OJF2_52930	COG0673	inositol 2-dehydrogenase activity
OJF2_52980	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
OJF2_53020	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
OJF2_53030	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
OJF2_53040	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OJF2_53120	COG1116	anion transmembrane transporter activity
OJF2_53220	COG5002	protein histidine kinase activity
OJF2_53230	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_53280	COG3344	reverse transcriptase
OJF2_53320	COG2801	Transposase and inactivated derivatives
OJF2_53550	COG1595	DNA-templated transcription, initiation
OJF2_53570	COG2204	response regulator
OJF2_53620	COG0714	Associated with various cellular activities
OJF2_53720	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
OJF2_53760	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
OJF2_53770	COG1185	polyribonucleotide nucleotidyltransferase activity
OJF2_53780	COG4191	Histidine kinase
OJF2_53820	COG3795	YCII-related domain
OJF2_53830	COG4941	Belongs to the sigma-70 factor family
OJF2_53850	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
OJF2_53860	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
OJF2_53870	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
OJF2_53880	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OJF2_53900	COG2258	MOSC domain
OJF2_53930	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
OJF2_53940	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
OJF2_53950	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
OJF2_53970	COG0646	methionine synthase
OJF2_53970	COG1410	methionine synthase
OJF2_53980	COG2010	Cytochrome c
OJF2_54030	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OJF2_54090	COG0488	(ABC) transporter
OJF2_54100	COG0322	excinuclease ABC activity
OJF2_54110	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OJF2_54130	COG0432	Pfam Uncharacterised protein family UPF0047
OJF2_54240	COG3104	oligopeptide transport
OJF2_54250	COG0823	Involved in the tonB-independent uptake of proteins
OJF2_54250	COG1506	peptidase
OJF2_54250	COG4946	Tricorn protease homolog
OJF2_54260	COG4555	ABC transporter
OJF2_54300	COG2759	Belongs to the formate--tetrahydrofolate ligase family
OJF2_54360	COG2030	dehydratase
OJF2_54370	COG3279	Response regulator of the LytR AlgR family
OJF2_54390	COG2205	protein histidine kinase activity
OJF2_54480	COG0714	Associated with various cellular activities
OJF2_54540	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OJF2_54550	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
OJF2_54560	COG0723	plastoquinol--plastocyanin reductase activity
OJF2_54570	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
OJF2_54610	COG3458	cephalosporin-C deacetylase activity
OJF2_54640	COG0640	Transcriptional regulator
OJF2_54690	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
OJF2_54700	COG0573	inorganic phosphate transmembrane transporter activity
OJF2_54710	COG0581	inorganic phosphate transmembrane transporter activity
OJF2_54740	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OJF2_54760	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
OJF2_54820	COG0515	serine threonine protein kinase
OJF2_54890	COG0515	serine threonine protein kinase
OJF2_54890	COG0457	Tetratricopeptide repeat
OJF2_54900	COG0438	transferase activity, transferring glycosyl groups
OJF2_54920	COG1215	transferase activity, transferring glycosyl groups
OJF2_54960	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_54990	COG0811	peptide transport
OJF2_55010	COG0586	Pfam SNARE associated Golgi protein
OJF2_55070	COG0281	malic enzyme
OJF2_55100	COG0163	prenyltransferase activity
OJF2_55110	COG1595	DNA-templated transcription, initiation
OJF2_55210	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_55220	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OJF2_55230	COG4106	trans-aconitate 2-methyltransferase activity
OJF2_55240	COG0438	transferase activity, transferring glycosyl groups
OJF2_55280	COG1199	ATP-dependent helicase activity
OJF2_55290	COG2022	thiamine diphosphate biosynthetic process
OJF2_55300	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
OJF2_55310	COG0215	cysteine-tRNA ligase activity
OJF2_55320	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
OJF2_55330	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OJF2_55340	COG0667	Aldo Keto reductase
OJF2_55350	COG0667	Aldo Keto reductase
OJF2_55360	COG1253	flavin adenine dinucleotide binding
OJF2_55460	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_55500	COG3706	GGDEF domain
OJF2_55500	COG0745	RESPONSE REGULATOR receiver
OJF2_55510	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OJF2_55550	COG0424	maF-like protein
OJF2_55560	COG2234	aminopeptidase activity
OJF2_55650	COG1131	(ABC) transporter
OJF2_55710	COG3259	Nickel-dependent hydrogenase
OJF2_55730	COG0384	phenazine biosynthesis protein PhzF
OJF2_55760	COG0612	Peptidase, M16
OJF2_55800	COG0539	negative regulation of cytoplasmic translation
OJF2_55810	COG0612	Peptidase, M16
OJF2_55820	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
OJF2_55850	COG1929	Belongs to the glycerate kinase type-1 family
OJF2_55860	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
OJF2_55870	COG0802	atpase or kinase
OJF2_55890	COG2081	HI0933 family
OJF2_55970	COG0287	Prephenate dehydrogenase
OJF2_55980	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OJF2_56000	COG0047	phosphoribosylformylglycinamidine synthase activity
OJF2_56030	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
OJF2_56240	COG1879	ABC-type sugar transport system periplasmic component
OJF2_56260	COG0477	Major facilitator Superfamily
OJF2_56280	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OJF2_56280	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OJF2_56300	COG4251	negative regulation of phosphorylation
OJF2_56310	COG1032	radical SAM domain protein
OJF2_56370	COG1994	Peptidase M50
OJF2_56380	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
OJF2_56390	COG1129	ABC transporter
OJF2_56400	COG1172	Belongs to the binding-protein-dependent transport system permease family
OJF2_56420	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
OJF2_56450	COG0724	RNA recognition motif
OJF2_56460	COG2226	methyltransferase
OJF2_56470	COG2272	Belongs to the type-B carboxylesterase lipase family
OJF2_56480	COG4221	oxidoreductase activity
OJF2_56500	COG1060	Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate
OJF2_56560	COG0515	serine threonine protein kinase
OJF2_56560	COG2815	serine threonine protein kinase
OJF2_56580	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
OJF2_56590	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OJF2_56600	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OJF2_56610	COG1970	mechanosensitive ion channel activity
OJF2_56620	COG1285	pathogenesis
OJF2_56630	COG1012	belongs to the aldehyde dehydrogenase family
OJF2_56710	COG2062	phosphohistidine phosphatase, SixA
OJF2_56750	COG2070	2-Nitropropane dioxygenase
OJF2_56750	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
OJF2_56760	COG3321	synthase
OJF2_56760	COG0604	alcohol dehydrogenase
OJF2_56780	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
OJF2_56790	COG0596	Alpha beta hydrolase
OJF2_56800	COG0318	PFAM AMP-dependent synthetase and ligase
OJF2_56810	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_56820	COG4251	negative regulation of phosphorylation
OJF2_56830	COG0745	RESPONSE REGULATOR receiver
OJF2_56840	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
OJF2_56850	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OJF2_56860	COG1193	negative regulation of DNA recombination
OJF2_56890	COG0632	four-way junction helicase activity
OJF2_56900	COG2255	four-way junction helicase activity
OJF2_56920	COG1899	peptidyl-lysine modification to peptidyl-hypusine
OJF2_56930	COG1945	arginine decarboxylase activity
OJF2_57000	COG1051	belongs to the nudix hydrolase family
OJF2_57030	COG1254	Belongs to the acylphosphatase family
OJF2_57050	COG1132	(ABC) transporter
OJF2_57060	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_57070	COG1404	Belongs to the peptidase S8 family
OJF2_57080	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
OJF2_57120	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OJF2_57140	COG1045	serine acetyltransferase
OJF2_57170	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_57230	COG0129	dihydroxy-acid dehydratase activity
OJF2_57280	COG0156	8-amino-7-oxononanoate synthase activity
OJF2_57290	COG1063	alcohol dehydrogenase
OJF2_57370	COG1252	NADH dehydrogenase
OJF2_57380	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
OJF2_57390	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
OJF2_57450	COG1609	Transcriptional regulator
OJF2_57460	COG1621	beta-fructofuranosidase activity
OJF2_57480	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OJF2_57490	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_57520	COG0667	Aldo Keto reductase
OJF2_57530	COG2204	response regulator
OJF2_57550	COG0671	phosphoesterase, PA-phosphatase related
OJF2_57580	COG0039	L-malate dehydrogenase activity
OJF2_57710	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_57760	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
OJF2_57780	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_57810	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
OJF2_57820	COG0211	Belongs to the bacterial ribosomal protein bL27 family
OJF2_57830	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
OJF2_57850	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
OJF2_57870	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OJF2_57870	COG2010	Cytochrome c
OJF2_57890	COG0673	inositol 2-dehydrogenase activity
OJF2_57900	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_57970	COG1233	COG1233 Phytoene dehydrogenase and related
OJF2_58000	COG0352	thiamine-phosphate diphosphorylase activity
OJF2_58010	COG0386	Belongs to the glutathione peroxidase family
OJF2_58070	COG1136	(ABC) transporter
OJF2_58080	COG1566	PFAM secretion protein HlyD family protein
OJF2_58130	COG1595	DNA-templated transcription, initiation
OJF2_58180	COG3250	beta-galactosidase activity
OJF2_58240	COG0653	protein targeting
OJF2_58260	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OJF2_58270	COG0101	tRNA pseudouridine synthase activity
OJF2_58280	COG0438	transferase activity, transferring glycosyl groups
OJF2_58290	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
OJF2_58330	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
OJF2_58350	COG0443	Heat shock 70 kDa protein
OJF2_58380	COG0058	SHG alpha-glucan phosphorylase activity
OJF2_58390	COG0495	leucyl-tRNA aminoacylation
OJF2_58420	COG4797	methyltransferase
OJF2_58420	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
OJF2_58480	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
OJF2_58490	COG0045	succinate-CoA ligase (ADP-forming) activity
OJF2_58530	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
OJF2_58540	COG0540	Belongs to the ATCase OTCase family
OJF2_58550	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
OJF2_58560	COG1404	Belongs to the peptidase S8 family
OJF2_58690	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OJF2_58700	COG0784	Response regulator, receiver
OJF2_58700	COG2205	protein histidine kinase activity
OJF2_58760	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OJF2_58790	COG0438	transferase activity, transferring glycosyl groups
OJF2_58810	COG0673	inositol 2-dehydrogenase activity
OJF2_58850	COG0321	lipoyl(octanoyl) transferase activity
OJF2_58860	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
OJF2_58870	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
OJF2_58880	COG0066	3-isopropylmalate dehydratase activity
OJF2_58890	COG5002	protein histidine kinase activity
OJF2_58890	COG0784	Response regulator, receiver
OJF2_58890	COG2198	Histidine kinase
OJF2_58980	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
OJF2_58990	COG0750	zinc metalloprotease
OJF2_59010	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OJF2_59030	COG0227	Belongs to the bacterial ribosomal protein bL28 family
OJF2_59040	COG0333	Belongs to the bacterial ribosomal protein bL32 family
OJF2_59090	COG0473	3-isopropylmalate dehydrogenase activity
OJF2_59110	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OJF2_59140	COG0859	PFAM glycosyl transferase family 9
OJF2_59150	COG1663	tetraacyldisaccharide 4'-kinase activity
OJF2_59220	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_59250	COG1229	Formylmethanofuran dehydrogenase subunit A
OJF2_59260	COG2037	Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT)
OJF2_59280	COG3252	Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT
OJF2_59290	COG0189	ligase activity
OJF2_59320	COG0386	Belongs to the glutathione peroxidase family
OJF2_59330	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
OJF2_59340	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
OJF2_59400	COG5002	protein histidine kinase activity
OJF2_59410	COG0492	ferredoxin-NADP+ reductase activity
OJF2_59420	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
OJF2_59430	COG0745	RESPONSE REGULATOR receiver
OJF2_59440	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
OJF2_59450	COG1473	amidohydrolase
OJF2_59520	COG0438	transferase activity, transferring glycosyl groups
OJF2_59530	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OJF2_59620	COG0151	Belongs to the GarS family
OJF2_59740	COG0515	serine threonine protein kinase
OJF2_59740	COG2815	serine threonine protein kinase
OJF2_59750	COG2208	phosphoserine phosphatase activity
OJF2_59750	COG2770	Histidine kinase
OJF2_59760	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
OJF2_59810	COG2205	protein histidine kinase activity
OJF2_59820	COG0745	RESPONSE REGULATOR receiver
OJF2_59840	COG0463	Glycosyl transferase, family 2
OJF2_59850	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
OJF2_59920	COG1834	amidinotransferase
OJF2_59940	COG3844	kynureninase activity
OJF2_59960	COG1136	(ABC) transporter
OJF2_59960	COG0577	efflux transmembrane transporter activity
OJF2_59980	COG1136	(ABC) transporter
OJF2_60010	COG1691	(AIR) carboxylase
OJF2_60020	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
OJF2_60020	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OJF2_60060	COG0724	RNA recognition motif
OJF2_60080	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
OJF2_60090	COG0500	methyltransferase
OJF2_60100	COG1959	2 iron, 2 sulfur cluster binding
OJF2_60120	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_60180	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
OJF2_60240	COG2217	Heavy metal translocating P-type atpase
OJF2_60280	COG0811	peptide transport
OJF2_60290	COG0657	acetylesterase activity
OJF2_60290	COG2755	lipolytic protein G-D-S-L family
OJF2_60310	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_60320	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
OJF2_60340	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
OJF2_60350	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
OJF2_60380	COG1960	acyl-CoA dehydrogenase activity
OJF2_60400	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
OJF2_60410	COG0822	iron-sulfur transferase activity
OJF2_60440	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OJF2_60450	COG0131	Imidazoleglycerol-phosphate dehydratase
OJF2_60480	COG0531	amino acid
OJF2_60510	COG0493	'glutamate synthase
OJF2_60510	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
OJF2_60520	COG0543	2 iron, 2 sulfur cluster binding
OJF2_60550	COG0653	protein targeting
OJF2_60590	COG1795	PFAM Formaldehyde-activating enzyme (Fae)
OJF2_60600	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
OJF2_60630	COG0823	Involved in the tonB-independent uptake of proteins
OJF2_60630	COG1506	peptidase
OJF2_60630	COG4946	Tricorn protease homolog
OJF2_60650	COG3386	PFAM SMP-30 Gluconolaconase
OJF2_60660	COG0667	Aldo Keto reductase
OJF2_60690	COG0492	ferredoxin-NADP+ reductase activity
OJF2_60820	COG2198	Histidine kinase
OJF2_60820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OJF2_60820	COG2205	protein histidine kinase activity
OJF2_60820	COG0784	Response regulator, receiver
OJF2_60960	COG1131	(ABC) transporter
OJF2_61010	COG2255	four-way junction helicase activity
OJF2_61060	COG0515	serine threonine protein kinase
OJF2_61060	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
OJF2_61080	COG0424	maF-like protein
OJF2_61090	COG0745	RESPONSE REGULATOR receiver
OJF2_61140	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
OJF2_61170	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OJF2_61200	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OJF2_61210	COG0357	Ribosomal RNA small subunit methyltransferase G
OJF2_61210	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OJF2_61220	COG0521	Mo-molybdopterin cofactor biosynthetic process
OJF2_61240	COG1573	uracil-dna glycosylase
OJF2_61250	COG4191	Histidine kinase
OJF2_61290	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
OJF2_61310	COG0105	UTP biosynthetic process
OJF2_61360	COG2096	Adenosyltransferase
OJF2_61400	COG0243	molybdopterin cofactor binding
OJF2_61490	COG0640	Transcriptional regulator
OJF2_61520	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
OJF2_61590	COG0640	Transcriptional regulator
OJF2_61710	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
OJF2_61770	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_61920	COG1595	DNA-templated transcription, initiation
OJF2_61940	COG0702	epimerase
OJF2_61960	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OJF2_62020	COG3119	arylsulfatase activity
OJF2_62090	COG0673	inositol 2-dehydrogenase activity
OJF2_62120	COG1902	pentaerythritol trinitrate reductase activity
OJF2_62160	COG0784	Response regulator, receiver
OJF2_62180	COG5002	protein histidine kinase activity
OJF2_62190	COG2815	serine threonine protein kinase
OJF2_62190	COG0515	serine threonine protein kinase
OJF2_62200	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
OJF2_62230	COG1846	Transcriptional regulator
OJF2_62270	COG0585	pseudouridine synthase activity
OJF2_62280	COG0564	pseudouridine synthase activity
OJF2_62340	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OJF2_62350	COG0730	response to heat
OJF2_62370	COG0346	lactoylglutathione lyase activity
OJF2_62400	COG2133	pyrroloquinoline quinone binding
OJF2_62430	COG1137	ATPase activity
OJF2_62460	COG0481	GTPase activity
OJF2_62500	COG0673	inositol 2-dehydrogenase activity
OJF2_62520	COG0583	DNA-binding transcription factor activity
OJF2_62530	COG0450	alkyl hydroperoxide reductase
OJF2_62540	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OJF2_62560	COG2115	Belongs to the xylose isomerase family
OJF2_62570	COG3119	arylsulfatase activity
OJF2_62580	COG2815	serine threonine protein kinase
OJF2_62580	COG0515	serine threonine protein kinase
OJF2_62600	COG5549	protein import
OJF2_62600	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_62610	COG2205	protein histidine kinase activity
OJF2_62610	COG0784	Response regulator, receiver
OJF2_62700	COG0859	PFAM glycosyl transferase family 9
OJF2_62720	COG0515	serine threonine protein kinase
OJF2_62720	COG2815	serine threonine protein kinase
OJF2_62760	COG1472	Belongs to the glycosyl hydrolase 3 family
OJF2_62770	COG0515	serine threonine protein kinase
OJF2_62770	COG2815	serine threonine protein kinase
OJF2_62810	COG0646	methionine synthase
OJF2_62810	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OJF2_62850	COG0673	inositol 2-dehydrogenase activity
OJF2_62920	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
OJF2_62930	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
OJF2_62960	COG1722	exodeoxyribonuclease VII activity
OJF2_62970	COG1570	exodeoxyribonuclease VII activity
OJF2_63050	COG1132	(ABC) transporter
OJF2_63140	COG0129	dihydroxy-acid dehydratase activity
OJF2_63160	COG0175	sulfate reduction
OJF2_63180	COG0529	Catalyzes the synthesis of activated sulfate
OJF2_63180	COG2046	Belongs to the sulfate adenylyltransferase family
OJF2_63320	COG0457	Tetratricopeptide repeat
OJF2_63320	COG0463	Glycosyl transferase, family 2
OJF2_63390	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
OJF2_63400	COG0445	tRNA wobble uridine modification
OJF2_63420	COG4191	Histidine kinase
OJF2_63490	COG0745	RESPONSE REGULATOR receiver
OJF2_63500	COG5002	protein histidine kinase activity
OJF2_63520	COG1595	DNA-templated transcription, initiation
OJF2_63570	COG2766	serine protein kinase
OJF2_63580	COG2718	Belongs to the UPF0229 family
OJF2_63600	COG2719	SpoVR family
OJF2_63670	COG0107	imidazoleglycerol-phosphate synthase activity
OJF2_63690	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OJF2_63730	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
OJF2_63740	COG0745	RESPONSE REGULATOR receiver
OJF2_63750	COG0285	dihydrofolate synthase activity
OJF2_63760	COG2363	Small membrane protein
OJF2_63780	COG2848	UPF0210 protein
OJF2_63840	COG0765	amino acid transport
OJF2_63870	COG2815	serine threonine protein kinase
OJF2_63870	COG0515	serine threonine protein kinase
OJF2_63880	COG0477	Major facilitator Superfamily
OJF2_63940	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OJF2_63950	COG1872	DUF167
OJF2_63960	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
OJF2_64060	COG1032	radical SAM domain protein
OJF2_64090	COG0326	Molecular chaperone. Has ATPase activity
OJF2_64110	COG4303	Ethanolamine ammonia lyase large subunit
OJF2_64130	COG4302	ethanolamine ammonia-lyase activity
OJF2_64140	COG4691	Plasmid stability protein
OJF2_64170	COG3629	intracellular signal transduction
OJF2_64170	COG3903	Transcriptional regulator
OJF2_64210	COG0052	Belongs to the universal ribosomal protein uS2 family
OJF2_64220	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
OJF2_64230	COG0528	UMP kinase activity
OJF2_64240	COG0233	cytoplasmic translational termination
OJF2_64300	COG0438	transferase activity, transferring glycosyl groups
OJF2_64330	COG1215	transferase activity, transferring glycosyl groups
OJF2_64360	COG0438	transferase activity, transferring glycosyl groups
OJF2_64400	COG1215	transferase activity, transferring glycosyl groups
OJF2_64420	COG1215	transferase activity, transferring glycosyl groups
OJF2_64480	COG0673	inositol 2-dehydrogenase activity
OJF2_64500	COG3206	protein involved in exopolysaccharide biosynthesis
OJF2_64500	COG0489	protein tyrosine kinase activity
OJF2_64510	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OJF2_64550	COG1215	transferase activity, transferring glycosyl groups
OJF2_64660	COG1704	LemA family
OJF2_64670	COG1643	Atp-dependent helicase
OJF2_64690	COG0515	serine threonine protein kinase
OJF2_64690	COG2815	serine threonine protein kinase
OJF2_64700	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
OJF2_64750	COG0515	serine threonine protein kinase
OJF2_64750	COG2815	serine threonine protein kinase
OJF2_64800	COG1940	carbohydrate kinase activity
OJF2_64810	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
OJF2_64900	COG1132	(ABC) transporter
OJF2_64920	COG0667	Aldo Keto reductase
OJF2_64980	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
OJF2_65020	COG2267	carboxylic ester hydrolase activity
OJF2_65070	COG0018	arginyl-trna synthetase
OJF2_65120	COG0110	maltose O-acetyltransferase activity
OJF2_65350	COG0443	Heat shock 70 kDa protein
OJF2_65360	COG0443	Heat shock 70 kDa protein
OJF2_65410	COG0330	HflC and HflK could
OJF2_65450	COG1032	radical SAM domain protein
OJF2_65540	COG0673	inositol 2-dehydrogenase activity
OJF2_65580	COG0673	inositol 2-dehydrogenase activity
OJF2_65600	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
OJF2_65600	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
OJF2_65620	COG0640	Transcriptional regulator
OJF2_65630	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OJF2_65640	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
OJF2_65660	COG0515	serine threonine protein kinase
OJF2_65670	COG0736	holo-[acyl-carrier-protein] synthase activity
OJF2_65690	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
OJF2_65690	COG1073	alpha beta
OJF2_65690	COG3064	Membrane
OJF2_65720	COG2814	Major facilitator Superfamily
OJF2_65750	COG0745	RESPONSE REGULATOR receiver
OJF2_65760	COG0745	RESPONSE REGULATOR receiver
OJF2_65760	COG2205	protein histidine kinase activity
OJF2_65760	COG4191	Histidine kinase
OJF2_65780	COG3852	Histidine kinase
OJF2_65850	COG0714	Associated with various cellular activities
OJF2_65870	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
OJF2_65880	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
OJF2_66010	COG0673	inositol 2-dehydrogenase activity
OJF2_66050	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_66100	COG0247	lactate metabolic process
OJF2_66100	COG0277	FAD linked oxidase domain protein
OJF2_66110	COG4948	Mandelate Racemase Muconate Lactonizing
OJF2_66120	COG0028	Belongs to the TPP enzyme family
OJF2_66150	COG1595	DNA-templated transcription, initiation
OJF2_66170	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OJF2_66180	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OJF2_66300	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
OJF2_66320	COG0861	Integral membrane protein TerC family
OJF2_66350	COG2205	protein histidine kinase activity
OJF2_66360	COG0784	Response regulator, receiver
OJF2_66370	COG4191	Histidine kinase
OJF2_66540	COG0517	IMP dehydrogenase activity
OJF2_66540	COG0516	GMP reductase activity
OJF2_66560	COG0704	Plays a role in the regulation of phosphate uptake
OJF2_66630	COG0426	domain, Protein
OJF2_66630	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OJF2_66660	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_66670	COG2032	superoxide dismutase activity
OJF2_66740	COG1408	metallophosphoesterase
OJF2_66750	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
OJF2_66760	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OJF2_66770	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
OJF2_66780	COG2971	BadF BadG BcrA BcrD
OJF2_66900	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OJF2_66930	COG0617	tRNA 3'-terminal CCA addition
OJF2_66940	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
OJF2_66970	COG1774	PSP1 C-terminal conserved region
OJF2_66990	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
OJF2_67100	COG4152	abc transporter atp-binding protein
OJF2_67140	COG2944	sequence-specific DNA binding
OJF2_67150	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
OJF2_67160	COG0205	6-phosphofructokinase activity
OJF2_67210	COG3158	transport of potassium into the cell
OJF2_67240	COG0644	oxidoreductase
OJF2_67390	COG1032	radical SAM domain protein
OJF2_67400	COG0529	Catalyzes the synthesis of activated sulfate
OJF2_67400	COG2895	sulfate adenylyltransferase (ATP) activity
OJF2_67410	COG0175	sulfate reduction
OJF2_67430	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
OJF2_67460	COG0405	Gamma-glutamyltransferase
OJF2_67540	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OJF2_67560	COG2721	sulfolactate sulfo-lyase activity
OJF2_67570	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OJF2_67590	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OJF2_67600	COG1459	type II secretion system
OJF2_67670	COG4968	Prepilin-type N-terminal cleavage methylation domain
OJF2_67710	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
OJF2_67730	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
OJF2_67740	COG0328	RNA-DNA hybrid ribonuclease activity
OJF2_67830	COG3852	Histidine kinase
OJF2_67920	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OJF2_67950	COG1131	(ABC) transporter
OJF2_67970	COG0512	Glutamine amidotransferase of anthranilate synthase
OJF2_67990	COG0815	Transfers the fatty acyl group on membrane lipoproteins
OJF2_68030	COG4804	nuclease activity
OJF2_68070	COG2205	protein histidine kinase activity
OJF2_68080	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OJF2_68120	COG0297	glycogen (starch) synthase activity
OJF2_68170	COG1595	DNA-templated transcription, initiation
OJF2_68260	COG0515	serine threonine protein kinase
OJF2_68260	COG2815	serine threonine protein kinase
OJF2_68300	COG1449	Belongs to the glycosyl hydrolase 57 family
OJF2_68330	COG2267	carboxylic ester hydrolase activity
OJF2_68340	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
OJF2_68350	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_68390	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
OJF2_68420	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OJF2_68430	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OJF2_68460	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
OJF2_68520	COG3311	Transcriptional regulator
OJF2_68540	COG1473	amidohydrolase
OJF2_68580	COG0840	transmembrane signaling receptor activity
OJF2_68590	COG2198	Histidine kinase
OJF2_68590	COG0643	Histidine kinase
OJF2_68630	COG0515	serine threonine protein kinase
OJF2_68630	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_68680	COG1131	(ABC) transporter
OJF2_68690	COG0187	DNA topoisomerase II activity
OJF2_68700	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
OJF2_68720	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OJF2_68740	COG1621	beta-fructofuranosidase activity
OJF2_68750	COG0477	Major facilitator Superfamily
OJF2_68750	COG2814	Major facilitator Superfamily
OJF2_68760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OJF2_68790	COG2204	response regulator
OJF2_68860	COG1301	dicarboxylic acid transport
OJF2_68880	COG0463	Glycosyl transferase, family 2
OJF2_68890	COG4106	trans-aconitate 2-methyltransferase activity
OJF2_69010	COG0006	proline dipeptidase activity
OJF2_69020	COG0511	ligase activity, forming carbon-carbon bonds
OJF2_69030	COG0439	Biotin carboxylase
OJF2_69120	COG0714	Associated with various cellular activities
OJF2_69160	COG0415	Belongs to the DNA photolyase family
OJF2_69200	COG2217	Heavy metal translocating P-type atpase
OJF2_69240	COG0109	protoheme IX farnesyltransferase activity
OJF2_69320	COG0438	transferase activity, transferring glycosyl groups
OJF2_69370	COG0542	response to heat
OJF2_69380	COG0443	Heat shock 70 kDa protein
OJF2_69410	COG0077	Prephenate dehydratase
OJF2_69410	COG1605	Chorismate mutase
OJF2_69480	COG0709	Synthesizes selenophosphate from selenide and ATP
OJF2_69580	COG0574	Belongs to the PEP-utilizing enzyme family
OJF2_69580	COG3848	Pyruvate phosphate dikinase
OJF2_69590	COG1297	OPT oligopeptide transporter protein
OJF2_69600	COG0563	adenylate kinase activity
OJF2_69610	COG0406	alpha-ribazole phosphatase activity
OJF2_69620	COG1674	ftsk spoiiie
OJF2_69630	COG1758	RNA polymerase activity
OJF2_69640	COG0194	GDP metabolic process
OJF2_69650	COG1561	YicC-like family, N-terminal region
OJF2_69670	COG0149	triose-phosphate isomerase activity
OJF2_69680	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OJF2_69740	COG0673	inositol 2-dehydrogenase activity
OJF2_69870	COG0793	Belongs to the peptidase S41A family
OJF2_69990	COG3852	Histidine kinase
OJF2_70090	COG5002	protein histidine kinase activity
OJF2_70100	COG1132	(ABC) transporter
OJF2_70110	COG1132	(ABC) transporter
OJF2_70120	COG2271	Major facilitator Superfamily
OJF2_70220	COG2267	carboxylic ester hydrolase activity
OJF2_70240	COG0596	Alpha beta hydrolase
OJF2_70280	COG1335	isochorismatase
OJF2_70300	COG2208	phosphoserine phosphatase activity
OJF2_70310	COG4946	Tricorn protease homolog
OJF2_70310	COG0823	Involved in the tonB-independent uptake of proteins
OJF2_70310	COG1506	peptidase
OJF2_70420	COG2755	lipolytic protein G-D-S-L family
OJF2_70420	COG0657	acetylesterase activity
OJF2_70530	COG0515	serine threonine protein kinase
OJF2_70590	COG2205	protein histidine kinase activity
OJF2_70600	COG0745	RESPONSE REGULATOR receiver
OJF2_70640	COG0457	Tetratricopeptide repeat
OJF2_70640	COG0515	serine threonine protein kinase
OJF2_70660	COG0457	Tetratricopeptide repeat
OJF2_70660	COG0515	serine threonine protein kinase
OJF2_70710	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OJF2_70720	COG0613	PHP domain protein
OJF2_70740	COG1472	Belongs to the glycosyl hydrolase 3 family
OJF2_70760	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_70820	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OJF2_70850	COG1686	Belongs to the peptidase S11 family
OJF2_70920	COG0515	serine threonine protein kinase
OJF2_70920	COG2815	serine threonine protein kinase
OJF2_70990	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
OJF2_71030	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
OJF2_71040	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
OJF2_71060	COG0515	serine threonine protein kinase
OJF2_71060	COG2815	serine threonine protein kinase
OJF2_71100	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
OJF2_71110	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
OJF2_71150	COG0519	Catalyzes the synthesis of GMP from XMP
OJF2_71150	COG0518	GMP synthase (glutamine-hydrolyzing) activity
OJF2_71180	COG1609	Transcriptional regulator
OJF2_71190	COG3507	Belongs to the glycosyl hydrolase 43 family
OJF2_71220	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
OJF2_71300	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
OJF2_71380	COG2080	2 iron, 2 sulfur cluster binding
OJF2_71390	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
OJF2_71400	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OJF2_71440	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_71450	COG0484	heat shock protein binding
OJF2_71490	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
OJF2_71500	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
OJF2_71550	COG2226	methyltransferase
OJF2_71600	COG1215	transferase activity, transferring glycosyl groups
OJF2_71870	COG2814	Major facilitator Superfamily
OJF2_71910	COG1595	DNA-templated transcription, initiation
OJF2_71940	COG1309	transcriptional regulator
OJF2_71970	COG0584	glycerophosphoryl diester phosphodiesterase
OJF2_72010	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
OJF2_72040	COG1595	DNA-templated transcription, initiation
OJF2_72050	COG0037	tRNA processing
OJF2_72060	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
OJF2_72070	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OJF2_72110	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
OJF2_72120	COG0546	phosphoglycolate phosphatase activity
OJF2_72200	COG5433	transposase activity
OJF2_72290	COG2801	Transposase and inactivated derivatives
OJF2_72350	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
OJF2_72370	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_72790	COG2207	Transcriptional regulator
OJF2_72820	COG0275	rRNA processing
OJF2_72920	COG2340	Cysteine-rich secretory protein family
OJF2_72950	COG0515	serine threonine protein kinase
OJF2_72950	COG2815	serine threonine protein kinase
OJF2_73010	COG0515	serine threonine protein kinase
OJF2_73010	COG2815	serine threonine protein kinase
OJF2_73100	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OJF2_73160	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OJF2_73210	COG1621	beta-fructofuranosidase activity
OJF2_73220	COG4806	L-rhamnose isomerase
OJF2_73260	COG4585	Histidine kinase
OJF2_73290	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_73310	COG0515	serine threonine protein kinase
OJF2_73310	COG2815	serine threonine protein kinase
OJF2_73370	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
OJF2_73370	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
OJF2_73410	COG0829	nickel cation binding
OJF2_73440	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
OJF2_73450	COG0804	urea catabolic process
OJF2_73460	COG0832	Belongs to the urease beta subunit family
OJF2_73470	COG0831	urea catabolic process
OJF2_73480	COG4413	Urea transporter
OJF2_73510	COG2311	Membrane
OJF2_73530	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OJF2_73650	COG0515	serine threonine protein kinase
OJF2_73730	COG1028	Short-chain dehydrogenase reductase Sdr
OJF2_73740	COG1733	regulation of RNA biosynthetic process
OJF2_73830	COG0071	Belongs to the small heat shock protein (HSP20) family
OJF2_73840	COG0071	Belongs to the small heat shock protein (HSP20) family
OJF2_73980	COG0514	ATP-dependent DNA helicase (RecQ)
OJF2_74020	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_74060	COG1082	Xylose isomerase domain protein TIM barrel
OJF2_74130	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OJF2_74210	COG0668	transmembrane transport
OJF2_74280	COG1595	DNA-templated transcription, initiation
OJF2_74380	COG4325	translation initiation factor activity
OJF2_74400	COG5002	protein histidine kinase activity
OJF2_74620	COG2205	protein histidine kinase activity
OJF2_74630	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
OJF2_74650	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
OJF2_74670	COG4566	intracellular signal transduction
OJF2_74680	COG5002	protein histidine kinase activity
OJF2_74780	COG2814	Major facilitator Superfamily
OJF2_74790	COG1566	PFAM secretion protein HlyD family protein
OJF2_74820	COG3459	Glycosyltransferase 36 associated
OJF2_74880	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
OJF2_74930	COG2706	6-phosphogluconolactonase activity
OJF2_74980	COG2140	Oxalate decarboxylase
OJF2_75000	COG1864	DNA RNA non-specific endonuclease
OJF2_75000	COG3591	Belongs to the peptidase S1B family
OJF2_75010	COG3591	Belongs to the peptidase S1B family
OJF2_75010	COG1864	DNA RNA non-specific endonuclease
OJF2_75150	COG1262	PFAM Formylglycine-generating sulfatase enzyme
OJF2_75430	COG3118	belongs to the thioredoxin family
OJF2_75440	COG2208	phosphoserine phosphatase activity
OJF2_75440	COG2770	Histidine kinase
OJF2_75450	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OJF2_75690	COG2308	Evidence 4 Homologs of previously reported genes of
OJF2_75690	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
OJF2_75700	COG0346	lactoylglutathione lyase activity
OJF2_75850	COG4581	dead DEAH box helicase
OJF2_75910	COG0275	rRNA processing
OJF2_75940	COG0306	phosphate transporter
OJF2_76000	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
OJF2_76100	COG2226	methyltransferase
OJF2_76140	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
OJF2_76150	COG0307	riboflavin synthase, alpha
OJF2_76190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OJF2_76260	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_76300	COG0300	oxidoreductase activity
OJF2_76310	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
OJF2_76350	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_76400	COG0667	Aldo Keto reductase
OJF2_76410	COG0154	amidase activity
OJF2_76430	COG3224	Antibiotic biosynthesis monooxygenase
OJF2_76440	COG0402	S-adenosylhomocysteine deaminase activity
OJF2_76460	COG2080	2 iron, 2 sulfur cluster binding
OJF2_76460	COG1529	Aldehyde oxidase and xanthine dehydrogenase
OJF2_76600	COG3540	Alkaline phosphatase
OJF2_76710	COG1595	DNA-templated transcription, initiation
OJF2_76750	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
OJF2_76790	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
OJF2_76900	COG0515	serine threonine protein kinase
OJF2_76900	COG2815	serine threonine protein kinase
OJF2_76940	COG1595	DNA-templated transcription, initiation
OJF2_77040	COG2205	protein histidine kinase activity
OJF2_77040	COG2202	Pas domain
OJF2_77170	COG0726	polysaccharide deacetylase
OJF2_77190	COG1408	metallophosphoesterase
OJF2_77200	COG1595	DNA-templated transcription, initiation
OJF2_77210	COG0515	serine threonine protein kinase
OJF2_77210	COG2815	serine threonine protein kinase
OJF2_77300	COG3119	arylsulfatase activity
OJF2_77350	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OJF2_77360	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
OJF2_77410	COG3527	Alpha-acetolactate decarboxylase
OJF2_77480	COG2814	Major facilitator Superfamily
OJF2_77550	COG1131	(ABC) transporter
OJF2_77590	COG1136	(ABC) transporter
OJF2_77590	COG0577	efflux transmembrane transporter activity
OJF2_77660	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
OJF2_77780	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
OJF2_77790	COG0187	DNA topoisomerase II activity
OJF2_77810	COG0592	DNA-directed DNA polymerase activity
OJF2_77830	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
OJF2_77950	COG0515	serine threonine protein kinase
OJF2_77950	COG2815	serine threonine protein kinase
OJF2_78240	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OJF2_78250	COG1192	Involved in chromosome partitioning
OJF2_78290	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
OJF2_78310	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OJF2_78340	COG1682	transport, permease protein
OJF2_78350	COG0673	inositol 2-dehydrogenase activity
OJF2_78370	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
OJF2_78390	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
OJF2_78430	COG0438	transferase activity, transferring glycosyl groups
OJF2_78450	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
OJF2_78470	COG0489	protein tyrosine kinase activity
OJF2_78470	COG3206	protein involved in exopolysaccharide biosynthesis
OJF2_78490	COG2192	nodulation
OJF2_78520	COG0588	phosphoglycerate mutase activity
OJF2_78600	COG4974	Belongs to the 'phage' integrase family
OJF2_78630	COG1595	DNA-templated transcription, initiation
OJF2_78690	COG3459	Glycosyltransferase 36 associated
OJF2_78710	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
OJF2_78720	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
OJF2_78730	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
OJF2_78740	COG2205	protein histidine kinase activity
OJF2_78760	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
OJF2_78770	COG2382	esterase
OJF2_78810	COG0673	inositol 2-dehydrogenase activity
OJF2_78870	COG2207	Transcriptional regulator
OJF2_78910	COG0667	Aldo Keto reductase
OJF2_78980	COG0515	serine threonine protein kinase
OJF2_78980	COG2815	serine threonine protein kinase
OJF2_79010	COG0437	4 iron, 4 sulfur cluster binding
OJF2_79080	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
OJF2_79130	COG2204	response regulator
OJF2_79200	COG1192	Involved in chromosome partitioning
OJF2_79320	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
OJF2_79370	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
OJF2_79460	COG4251	negative regulation of phosphorylation
OJF2_79480	COG0745	RESPONSE REGULATOR receiver
OJF2_79480	COG3706	GGDEF domain