DLM_0017 SM00220 Serine/Threonine protein kinases, catalytic domain DLM_0018 SM00331 Sigma factor PP2C-like phosphatases DLM_0018 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DLM_0022 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_0022 SM00387 Histidine kinase-like ATPases DLM_0022 SM00388 His Kinase A (phosphoacceptor) domain DLM_0023 SM00448 cheY-homologous receiver domain DLM_0023 SM00862 Transcriptional regulatory protein, C terminal DLM_0024 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0024 SM00897 FIST N domain DLM_0024 SM01204 DLM_0024 DLM_0036 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_0041 SM00487 DEAD-like helicases superfamily DLM_0041 SM00490 helicase superfamily c-terminal domain DLM_0043 SM00382 ATPases associated with a variety of cellular activities DLM_0054 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DLM_0055 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DLM_0068 SM00938 Nitrogen regulatory protein P-II DLM_0070 SM00382 ATPases associated with a variety of cellular activities DLM_0076 SM00382 ATPases associated with a variety of cellular activities DLM_0076 SM00962 SRP54-type protein, GTPase domain DLM_0076 SM00963 SRP54-type protein, helical bundle domain DLM_0078 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DLM_0087 SM00646 DLM_0087 DLM_0092 SM00893 Electron transfer flavoprotein domain DLM_0093 SM00893 Electron transfer flavoprotein domain DLM_0095 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DLM_0097 SM00851 MGS-like domain DLM_0097 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DLM_0100 SM01103 DLM_0100 DLM_0102 SM00382 ATPases associated with a variety of cellular activities DLM_0105 SM01005 Alanine racemase, C-terminal domain DLM_0127 SM00072 Guanylate kinase homologues. DLM_0128 SM01409 DLM_0128 DLM_0129 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_0129 SM00954 Region found in RelA / SpoT proteins DLM_0134 SM00400 zinc finger DLM_0134 SM00493 DLM_0134 DLM_0134 SM00766 DNA primase DnaG DnaB-binding DLM_0138 SM00870 DLM_0138 DLM_0139 SM00382 ATPases associated with a variety of cellular activities DLM_0139 SM00448 cheY-homologous receiver domain DLM_0140 SM00387 Histidine kinase-like ATPases DLM_0140 SM00388 His Kinase A (phosphoacceptor) domain DLM_0141 SM00091 PAS domain DLM_0141 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0147 SM00925 MltA specific insert domain DLM_0156 SM00487 DEAD-like helicases superfamily DLM_0156 SM00490 helicase superfamily c-terminal domain DLM_0166 SM00878 Biotin carboxylase C-terminal domain DLM_0176 SM00882 Coenzyme A transferase DLM_0177 SM00882 Coenzyme A transferase DLM_0180 SM00382 ATPases associated with a variety of cellular activities DLM_0191 SM00487 DEAD-like helicases superfamily DLM_0191 SM00490 helicase superfamily c-terminal domain DLM_0195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_0195 SM00091 PAS domain DLM_0195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0205 SM00052 Putative diguanylate phosphodiesterase DLM_0205 SM00448 cheY-homologous receiver domain DLM_0206 SM00448 cheY-homologous receiver domain DLM_0208 SM00260 Two component signalling adaptor domain DLM_0209 SM00260 Two component signalling adaptor domain DLM_0210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0211 SM00073 Histidine Phosphotransfer domain DLM_0211 SM00260 Two component signalling adaptor domain DLM_0211 SM00387 Histidine kinase-like ATPases DLM_0211 SM01231 DLM_0211 DLM_0213 SM00448 cheY-homologous receiver domain DLM_0227 SM00257 Lysin motif DLM_0228 SM00704 CDGSH-type zinc finger. Function unknown. DLM_0229 SM00382 ATPases associated with a variety of cellular activities DLM_0234 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DLM_0234 SM00245 tail specific protease DLM_0237 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DLM_0246 SM00448 cheY-homologous receiver domain DLM_0246 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_0247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_0247 SM00387 Histidine kinase-like ATPases DLM_0256 SM00382 ATPases associated with a variety of cellular activities DLM_0260 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_0274 SM00244 prohibitin homologues DLM_0275 SM00244 prohibitin homologues DLM_0280 SM00382 ATPases associated with a variety of cellular activities DLM_0284 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_0284 SM00866 DLM_0284 DLM_0287 SM00870 DLM_0287 DLM_0292 SM00481 DNA polymerase alpha chain like domain DLM_0300 SM00363 S4 RNA-binding domain DLM_0303 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_0320 SM00479 DLM_0320 DLM_0324 SM00382 ATPases associated with a variety of cellular activities DLM_0324 SM00962 SRP54-type protein, GTPase domain DLM_0329 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_0329 SM00895 DLM_0329 DLM_0332 SM00052 Putative diguanylate phosphodiesterase DLM_0332 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_0332 SM00091 PAS domain DLM_0332 SM00267 diguanylate cyclase DLM_0332 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_0342 SM00382 ATPases associated with a variety of cellular activities DLM_0345 SM00937 DLM_0345 DLM_0347 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_0347 SM00866 DLM_0347 DLM_0355 SM00861 Transketolase, pyrimidine binding domain DLM_0360 SM00881 CoA binding domain DLM_0362 SM00769 Water Stress and Hypersensitive response DLM_0383 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DLM_0386 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DLM_0390 SM00825 Beta-ketoacyl synthase DLM_0392 SM00342 helix_turn_helix, arabinose operon control protein DLM_0398 SM00382 ATPases associated with a variety of cellular activities DLM_0420 SM01240 DLM_0420 DLM_0434 SM00257 Lysin motif DLM_0435 SM00849 Metallo-beta-lactamase superfamily DLM_0438 SM00479 DLM_0438 DLM_0448 SM00849 Metallo-beta-lactamase superfamily DLM_0451 SM00062 Bacterial periplasmic substrate-binding proteins DLM_0451 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DLM_0453 SM00382 ATPases associated with a variety of cellular activities DLM_0454 SM00062 Bacterial periplasmic substrate-binding proteins DLM_0467 SM00342 helix_turn_helix, arabinose operon control protein DLM_0467 SM00871 Bacterial transcription activator, effector binding domain DLM_0468 SM00871 Bacterial transcription activator, effector binding domain DLM_0469 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_0469 SM01240 DLM_0469 DLM_0471 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DLM_0471 SM00465 GIY-YIG type nucleases (URI domain) DLM_0486 SM00945 ProQ/FINO family DLM_0494 SM00899 DLM_0494 DLM_0506 SM00822 DLM_0506 DLM_0523 SM00822 DLM_0523 DLM_0544 SM00344 helix_turn_helix ASNC type DLM_0557 SM00382 ATPases associated with a variety of cellular activities DLM_0565 SM00562 DLM_0565 DLM_0567 SM00028 Tetratricopeptide repeats DLM_0568 SM00530 Helix-turn-helix XRE-family like proteins DLM_0572 SM00564 beta-propeller repeat DLM_0573 SM00382 ATPases associated with a variety of cellular activities DLM_0576 SM00244 prohibitin homologues DLM_0577 SM00244 prohibitin homologues DLM_0579 SM00788 Adenylosuccinate synthetase DLM_0588 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_0588 SM00357 Cold shock protein domain DLM_0588 SM00955 DLM_0588 DLM_0594 SM00387 Histidine kinase-like ATPases DLM_0594 SM00388 His Kinase A (phosphoacceptor) domain DLM_0596 SM00382 ATPases associated with a variety of cellular activities DLM_0596 SM00448 cheY-homologous receiver domain DLM_0604 SM00073 Histidine Phosphotransfer domain DLM_0604 SM00448 cheY-homologous receiver domain DLM_0605 SM00903 Flavin reductase like domain DLM_0619 SM00342 helix_turn_helix, arabinose operon control protein DLM_0620 SM00342 helix_turn_helix, arabinose operon control protein DLM_0624 SM00421 helix_turn_helix, Lux Regulon DLM_0627 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_0628 SM00822 DLM_0628 DLM_0629 SM00822 DLM_0629 DLM_0636 SM00382 ATPases associated with a variety of cellular activities DLM_0638 SM00357 Cold shock protein domain DLM_0638 SM00382 ATPases associated with a variety of cellular activities DLM_0638 SM00959 Rho termination factor, N-terminal domain DLM_0641 SM00267 diguanylate cyclase DLM_0658 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DLM_0659 SM00478 endonuclease III DLM_0659 SM00525 DLM_0659 DLM_0664 SM00100 Cyclic nucleotide-monophosphate binding domain DLM_0664 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_0673 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DLM_0677 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_0677 SM00895 DLM_0677 DLM_0679 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_0686 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_0691 SM00840 DLM_0691 DLM_0697 SM00878 Biotin carboxylase C-terminal domain DLM_0701 SM00422 helix_turn_helix, mercury resistance DLM_0705 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DLM_0716 SM00763 PrkA AAA domain DLM_0731 SM00363 S4 RNA-binding domain DLM_0732 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_0736 SM00382 ATPases associated with a variety of cellular activities DLM_0741 SM00382 ATPases associated with a variety of cellular activities DLM_0744 SM00230 Calpain-like thiol protease family. DLM_0744 SM00736 Dystroglycan-type cadherin-like domains. DLM_0770 SM00411 bacterial (prokaryotic) histone like domain DLM_0774 SM00644 DLM_0774 DLM_0811 SM00382 ATPases associated with a variety of cellular activities DLM_0820 SM00382 ATPases associated with a variety of cellular activities DLM_0822 SM00421 helix_turn_helix, Lux Regulon DLM_0822 SM00448 cheY-homologous receiver domain DLM_0825 SM00014 Acid phosphatase homologues DLM_0829 SM00382 ATPases associated with a variety of cellular activities DLM_0833 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_0836 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0836 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_0837 SM00382 ATPases associated with a variety of cellular activities DLM_0838 SM00481 DNA polymerase alpha chain like domain DLM_0840 SM00903 Flavin reductase like domain DLM_0843 SM00919 Malic enzyme, NAD binding domain DLM_0843 SM01274 DLM_0843 DLM_0847 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_0847 SM00091 PAS domain DLM_0847 SM00387 Histidine kinase-like ATPases DLM_0847 SM00388 His Kinase A (phosphoacceptor) domain DLM_0855 SM00091 PAS domain DLM_0855 SM00387 Histidine kinase-like ATPases DLM_0855 SM00388 His Kinase A (phosphoacceptor) domain DLM_0855 SM01079 DLM_0855 DLM_0856 SM00342 helix_turn_helix, arabinose operon control protein DLM_0857 SM00382 ATPases associated with a variety of cellular activities DLM_0860 SM00062 Bacterial periplasmic substrate-binding proteins DLM_0861 SM00062 Bacterial periplasmic substrate-binding proteins DLM_0885 SM00644 DLM_0885 DLM_0890 SM00411 bacterial (prokaryotic) histone like domain DLM_0909 SM00342 helix_turn_helix, arabinose operon control protein DLM_0910 SM00893 Electron transfer flavoprotein domain DLM_0911 SM00893 Electron transfer flavoprotein domain DLM_0918 SM00382 ATPases associated with a variety of cellular activities DLM_0921 SM00829 Enoylreductase DLM_0922 SM00344 helix_turn_helix ASNC type DLM_0923 SM00342 helix_turn_helix, arabinose operon control protein DLM_0925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_0925 SM00091 PAS domain DLM_0927 SM00822 DLM_0927 DLM_0938 SM00448 cheY-homologous receiver domain DLM_0939 SM00260 Two component signalling adaptor domain DLM_0939 SM00448 cheY-homologous receiver domain DLM_0940 SM00260 Two component signalling adaptor domain DLM_0940 SM00448 cheY-homologous receiver domain DLM_0942 SM00052 Putative diguanylate phosphodiesterase DLM_0942 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_0942 SM00091 PAS domain DLM_0942 SM00267 diguanylate cyclase DLM_0946 SM00342 helix_turn_helix, arabinose operon control protein DLM_0947 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_0951 SM00342 helix_turn_helix, arabinose operon control protein DLM_0956 SM00487 DEAD-like helicases superfamily DLM_0956 SM00490 helicase superfamily c-terminal domain DLM_0961 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_0962 SM00052 Putative diguanylate phosphodiesterase DLM_0962 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_0962 SM00091 PAS domain DLM_0962 SM00267 diguanylate cyclase DLM_0963 SM00062 Bacterial periplasmic substrate-binding proteins DLM_0965 SM00226 Low molecular weight phosphatase family DLM_0967 SM00382 ATPases associated with a variety of cellular activities DLM_0967 SM00448 cheY-homologous receiver domain DLM_0972 SM00382 ATPases associated with a variety of cellular activities DLM_0974 SM00382 ATPases associated with a variety of cellular activities DLM_0987 SM01011 Aminopeptidase P, N-terminal domain DLM_0993 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DLM_0993 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DLM_0994 SM00267 diguanylate cyclase DLM_1002 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DLM_1015 SM00420 helix_turn_helix, Deoxyribose operon repressor DLM_1015 SM01134 DLM_1015 DLM_1023 SM00354 helix_turn _helix lactose operon repressor DLM_1029 SM00448 cheY-homologous receiver domain DLM_1029 SM00862 Transcriptional regulatory protein, C terminal DLM_1030 SM00387 Histidine kinase-like ATPases DLM_1030 SM00388 His Kinase A (phosphoacceptor) domain DLM_1039 SM00450 Rhodanese Homology Domain DLM_1041 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1041 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1042 SM00382 ATPases associated with a variety of cellular activities DLM_1042 SM01086 C-terminal, D2-small domain, of ClpB protein DLM_1050 SM00382 ATPases associated with a variety of cellular activities DLM_1069 SM00852 Probable molybdopterin binding domain DLM_1087 SM00977 TilS substrate C-terminal domain DLM_1092 SM00382 ATPases associated with a variety of cellular activities DLM_1092 SM00994 ClpX C4-type zinc finger DLM_1092 SM01086 C-terminal, D2-small domain, of ClpB protein DLM_1093 SM00382 ATPases associated with a variety of cellular activities DLM_1093 SM00464 Found in ATP-dependent protease La (LON) DLM_1094 SM00411 bacterial (prokaryotic) histone like domain DLM_1100 SM00382 ATPases associated with a variety of cellular activities DLM_1108 SM00491 DLM_1108 DLM_1118 SM01230 DLM_1118 DLM_1122 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1126 SM01230 DLM_1126 DLM_1132 SM00967 RNA 2'-O ribose methyltransferase substrate binding DLM_1133 SM00646 DLM_1133 DLM_1145 SM00382 ATPases associated with a variety of cellular activities DLM_1146 SM00052 Putative diguanylate phosphodiesterase DLM_1146 SM00267 diguanylate cyclase DLM_1150 SM00382 ATPases associated with a variety of cellular activities DLM_1169 SM00836 DALR anticodon binding domain DLM_1169 SM01016 Arginyl tRNA synthetase N terminal dom DLM_1171 SM00487 DEAD-like helicases superfamily DLM_1171 SM00490 helicase superfamily c-terminal domain DLM_1174 SM00363 S4 RNA-binding domain DLM_1180 SM00833 Cobalamin synthesis protein cobW C-terminal domain DLM_1182 SM00382 ATPases associated with a variety of cellular activities DLM_1188 SM00382 ATPases associated with a variety of cellular activities DLM_1197 SM00487 DEAD-like helicases superfamily DLM_1197 SM00490 helicase superfamily c-terminal domain DLM_1231 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_1231 SM00091 PAS domain DLM_1231 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1232 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1233 SM00260 Two component signalling adaptor domain DLM_1234 SM00448 cheY-homologous receiver domain DLM_1236 SM00138 Methyltransferase, chemotaxis proteins DLM_1237 SM00448 cheY-homologous receiver domain DLM_1238 SM00073 Histidine Phosphotransfer domain DLM_1238 SM00260 Two component signalling adaptor domain DLM_1238 SM00387 Histidine kinase-like ATPases DLM_1238 SM01231 DLM_1238 DLM_1240 SM00448 cheY-homologous receiver domain DLM_1241 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1243 SM00387 Histidine kinase-like ATPases DLM_1243 SM00388 His Kinase A (phosphoacceptor) domain DLM_1281 SM00411 bacterial (prokaryotic) histone like domain DLM_1300 SM00155 Phospholipase D. Active site motifs. DLM_1301 SM00671 Sel1-like repeats. DLM_1321 SM00342 helix_turn_helix, arabinose operon control protein DLM_1322 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1322 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1324 SM00869 Autotransporter beta-domain DLM_1325 SM00387 Histidine kinase-like ATPases DLM_1325 SM00388 His Kinase A (phosphoacceptor) domain DLM_1326 SM00448 cheY-homologous receiver domain DLM_1326 SM00862 Transcriptional regulatory protein, C terminal DLM_1328 SM00822 DLM_1328 DLM_1335 SM00342 helix_turn_helix, arabinose operon control protein DLM_1340 SM00267 diguanylate cyclase DLM_1343 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DLM_1344 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DLM_1358 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1358 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1361 SM00382 ATPases associated with a variety of cellular activities DLM_1364 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1365 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_1365 SM00895 DLM_1365 DLM_1371 SM00382 ATPases associated with a variety of cellular activities DLM_1376 SM00988 UreE urease accessory protein, N-terminal domain DLM_1380 SM00421 helix_turn_helix, Lux Regulon DLM_1380 SM00448 cheY-homologous receiver domain DLM_1381 SM00387 Histidine kinase-like ATPases DLM_1381 SM00388 His Kinase A (phosphoacceptor) domain DLM_1381 SM00448 cheY-homologous receiver domain DLM_1388 SM00382 ATPases associated with a variety of cellular activities DLM_1389 SM00382 ATPases associated with a variety of cellular activities DLM_1394 SM00382 ATPases associated with a variety of cellular activities DLM_1395 SM00382 ATPases associated with a variety of cellular activities DLM_1417 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1418 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1419 SM00382 ATPases associated with a variety of cellular activities DLM_1422 SM00487 DEAD-like helicases superfamily DLM_1422 SM00490 helicase superfamily c-terminal domain DLM_1423 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1423 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1428 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1432 SM00267 diguanylate cyclase DLM_1440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DLM_1445 SM00358 Double-stranded RNA binding motif DLM_1445 SM00535 Ribonuclease III family DLM_1454 SM00382 ATPases associated with a variety of cellular activities DLM_1454 SM00487 DEAD-like helicases superfamily DLM_1454 SM00490 helicase superfamily c-terminal domain DLM_1454 SM00847 Helicase associated domain (HA2) Add an annotation DLM_1456 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1465 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_1465 SM00732 Likely ribonuclease with RNase H fold. DLM_1476 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1476 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1478 SM00833 Cobalamin synthesis protein cobW C-terminal domain DLM_1483 SM00965 Secretin and TonB N terminus short domain DLM_1488 SM00382 ATPases associated with a variety of cellular activities DLM_1494 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1495 SM00450 Rhodanese Homology Domain DLM_1497 SM00382 ATPases associated with a variety of cellular activities DLM_1502 SM00822 DLM_1502 DLM_1510 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_1510 SM00895 DLM_1510 DLM_1512 SM00342 helix_turn_helix, arabinose operon control protein DLM_1516 SM00382 ATPases associated with a variety of cellular activities DLM_1522 SM00822 DLM_1522 DLM_1523 SM00382 ATPases associated with a variety of cellular activities DLM_1534 SM00382 ATPases associated with a variety of cellular activities DLM_1540 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_1540 SM00866 DLM_1540 DLM_1543 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1548 SM00382 ATPases associated with a variety of cellular activities DLM_1552 SM00382 ATPases associated with a variety of cellular activities DLM_1553 SM00342 helix_turn_helix, arabinose operon control protein DLM_1555 SM01130 DLM_1555 DLM_1560 SM01329 DLM_1560 DLM_1574 SM00421 helix_turn_helix, Lux Regulon DLM_1578 SM00382 ATPases associated with a variety of cellular activities DLM_1578 SM01086 C-terminal, D2-small domain, of ClpB protein DLM_1622 SM00530 Helix-turn-helix XRE-family like proteins DLM_1627 SM00974 DLM_1627 DLM_1637 SM00421 helix_turn_helix, Lux Regulon DLM_1637 SM00448 cheY-homologous receiver domain DLM_1646 SM00421 helix_turn_helix, Lux Regulon DLM_1651 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_1668 SM00100 Cyclic nucleotide-monophosphate binding domain DLM_1668 SM00419 helix_turn_helix, cAMP Regulatory protein DLM_1686 SM00267 diguanylate cyclase DLM_1687 SM00052 Putative diguanylate phosphodiesterase DLM_1687 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_1687 SM00091 PAS domain DLM_1687 SM00267 diguanylate cyclase DLM_1701 SM00448 cheY-homologous receiver domain DLM_1701 SM00862 Transcriptional regulatory protein, C terminal DLM_1702 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1702 SM00387 Histidine kinase-like ATPases DLM_1702 SM00388 His Kinase A (phosphoacceptor) domain DLM_1703 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1703 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1706 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DLM_1711 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_1711 SM00895 DLM_1711 DLM_1715 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DLM_1726 SM00052 Putative diguanylate phosphodiesterase DLM_1732 SM00936 Penicillin-binding protein 5, C-terminal domain DLM_1735 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_1741 SM00357 Cold shock protein domain DLM_1743 SM00155 Phospholipase D. Active site motifs. DLM_1747 SM00342 helix_turn_helix, arabinose operon control protein DLM_1748 SM01060 DLM_1748 DLM_1750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_1752 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1752 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1753 SM00052 Putative diguanylate phosphodiesterase DLM_1753 SM00091 PAS domain DLM_1753 SM00267 diguanylate cyclase DLM_1758 SM00829 Enoylreductase DLM_1761 SM00838 Elongation factor G C-terminus DLM_1794 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DLM_1799 SM00382 ATPases associated with a variety of cellular activities DLM_1799 SM00843 DLM_1799 DLM_1806 SM00895 DLM_1806 DLM_1816 SM00830 Chorismate mutase type II DLM_1823 SM00434 DNA Topoisomerase IV DLM_1825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1827 SM00344 helix_turn_helix ASNC type DLM_1831 SM00382 ATPases associated with a variety of cellular activities DLM_1835 SM00487 DEAD-like helicases superfamily DLM_1835 SM00490 helicase superfamily c-terminal domain DLM_1836 SM00091 PAS domain DLM_1836 SM00387 Histidine kinase-like ATPases DLM_1836 SM00388 His Kinase A (phosphoacceptor) domain DLM_1836 SM00448 cheY-homologous receiver domain DLM_1837 SM00448 cheY-homologous receiver domain DLM_1837 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_1838 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1838 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1839 SM00411 bacterial (prokaryotic) histone like domain DLM_1841 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1841 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1842 SM00422 helix_turn_helix, mercury resistance DLM_1845 SM00897 FIST N domain DLM_1845 SM01204 DLM_1845 DLM_1846 SM00091 PAS domain DLM_1846 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_1847 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DLM_1847 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_1849 SM00479 DLM_1849 DLM_1851 SM00903 Flavin reductase like domain DLM_1853 SM01230 DLM_1853 DLM_1854 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_1854 SM00895 DLM_1854 DLM_1860 SM00382 ATPases associated with a variety of cellular activities DLM_1862 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1862 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_1862 SM00091 PAS domain DLM_1862 SM00387 Histidine kinase-like ATPases DLM_1863 SM00421 helix_turn_helix, Lux Regulon DLM_1863 SM00448 cheY-homologous receiver domain DLM_1871 SM00822 DLM_1871 DLM_1877 SM01211 DLM_1877 DLM_1878 SM00938 Nitrogen regulatory protein P-II DLM_1880 SM00363 S4 RNA-binding domain DLM_1896 SM00530 Helix-turn-helix XRE-family like proteins DLM_1902 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1904 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1909 SM00062 Bacterial periplasmic substrate-binding proteins DLM_1911 SM00382 ATPases associated with a variety of cellular activities DLM_1916 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_1922 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DLM_1927 SM00448 cheY-homologous receiver domain DLM_1927 SM01012 DLM_1927 DLM_1932 SM00382 ATPases associated with a variety of cellular activities DLM_1932 SM00448 cheY-homologous receiver domain DLM_1933 SM00387 Histidine kinase-like ATPases DLM_1933 SM00388 His Kinase A (phosphoacceptor) domain DLM_1936 SM00919 Malic enzyme, NAD binding domain DLM_1936 SM01274 DLM_1936 DLM_1942 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_1942 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_1947 SM00387 Histidine kinase-like ATPases DLM_1947 SM00388 His Kinase A (phosphoacceptor) domain DLM_1947 SM00448 cheY-homologous receiver domain DLM_1948 SM00421 helix_turn_helix, Lux Regulon DLM_1948 SM00448 cheY-homologous receiver domain DLM_1950 SM00382 ATPases associated with a variety of cellular activities DLM_1954 SM00257 Lysin motif DLM_1955 SM00267 diguanylate cyclase DLM_1955 SM01080 DLM_1955 DLM_1957 SM00852 Probable molybdopterin binding domain DLM_1961 SM00986 Uracil DNA glycosylase superfamily DLM_1961 SM00987 UreE urease accessory protein, C-terminal domain DLM_1967 SM00935 Outer membrane protein (OmpH-like) DLM_1969 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DLM_1985 SM00479 DLM_1985 DLM_1989 SM00822 DLM_1989 DLM_1990 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DLM_1992 SM00448 cheY-homologous receiver domain DLM_2007 SM00829 Enoylreductase DLM_2010 SM00382 ATPases associated with a variety of cellular activities DLM_2017 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2017 SM00091 PAS domain DLM_2017 SM00267 diguanylate cyclase DLM_2019 SM00843 DLM_2019 DLM_2022 SM00062 Bacterial periplasmic substrate-binding proteins DLM_2024 SM00448 cheY-homologous receiver domain DLM_2030 SM00450 Rhodanese Homology Domain DLM_2033 SM00382 ATPases associated with a variety of cellular activities DLM_2033 SM00930 DLM_2033 DLM_2035 SM00382 ATPases associated with a variety of cellular activities DLM_2038 SM00062 Bacterial periplasmic substrate-binding proteins DLM_2043 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2043 SM00091 PAS domain DLM_2043 SM00387 Histidine kinase-like ATPases DLM_2044 SM00052 Putative diguanylate phosphodiesterase DLM_2044 SM00091 PAS domain DLM_2044 SM00267 diguanylate cyclase DLM_2044 SM00448 cheY-homologous receiver domain DLM_2056 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_2057 SM00062 Bacterial periplasmic substrate-binding proteins DLM_2058 SM00382 ATPases associated with a variety of cellular activities DLM_2068 SM00052 Putative diguanylate phosphodiesterase DLM_2068 SM00267 diguanylate cyclase DLM_2071 SM00919 Malic enzyme, NAD binding domain DLM_2071 SM01274 DLM_2071 DLM_2104 SM00644 DLM_2104 DLM_2109 SM00411 bacterial (prokaryotic) histone like domain DLM_2161 SM00346 helix_turn_helix isocitrate lyase regulation DLM_2162 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2162 SM01049 DLM_2162 DLM_2166 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2166 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2173 SM00382 ATPases associated with a variety of cellular activities DLM_2180 SM00052 Putative diguanylate phosphodiesterase DLM_2180 SM00091 PAS domain DLM_2180 SM00267 diguanylate cyclase DLM_2181 SM00138 Methyltransferase, chemotaxis proteins DLM_2182 SM00419 helix_turn_helix, cAMP Regulatory protein DLM_2184 SM00419 helix_turn_helix, cAMP Regulatory protein DLM_2185 SM00749 bacterial OsmY and nodulation domain DLM_2189 SM00749 bacterial OsmY and nodulation domain DLM_2190 SM00357 Cold shock protein domain DLM_2191 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_2201 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2201 SM00091 PAS domain DLM_2201 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2202 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DLM_2203 SM00226 Low molecular weight phosphatase family DLM_2210 SM00073 Histidine Phosphotransfer domain DLM_2210 SM00387 Histidine kinase-like ATPases DLM_2210 SM00388 His Kinase A (phosphoacceptor) domain DLM_2210 SM00448 cheY-homologous receiver domain DLM_2217 SM00327 von Willebrand factor (vWF) type A domain DLM_2217 SM00382 ATPases associated with a variety of cellular activities DLM_2225 SM00833 Cobalamin synthesis protein cobW C-terminal domain DLM_2236 SM00878 Biotin carboxylase C-terminal domain DLM_2237 SM00796 Allophanate hydrolase subunit 1 DLM_2238 SM00797 Allophanate hydrolase subunit 2 DLM_2239 SM00267 diguanylate cyclase DLM_2244 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_2248 SM00052 Putative diguanylate phosphodiesterase DLM_2253 SM00073 Histidine Phosphotransfer domain DLM_2254 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_2255 SM00357 Cold shock protein domain DLM_2258 SM00563 Phosphate acyltransferases DLM_2265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_2266 SM00855 Phosphoglycerate mutase family DLM_2268 SM00267 diguanylate cyclase DLM_2271 SM01034 Sensors of blue-light using FAD DLM_2272 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2272 SM00387 Histidine kinase-like ATPases DLM_2272 SM00388 His Kinase A (phosphoacceptor) domain DLM_2273 SM00448 cheY-homologous receiver domain DLM_2273 SM00862 Transcriptional regulatory protein, C terminal DLM_2288 SM00463 Small MutS-related domain DLM_2290 SM00670 Large family of predicted nucleotide-binding domains DLM_2298 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_2300 SM00091 PAS domain DLM_2300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2306 SM00244 prohibitin homologues DLM_2314 SM00563 Phosphate acyltransferases DLM_2316 SM00195 Dual specificity phosphatase, catalytic domain DLM_2319 SM00052 Putative diguanylate phosphodiesterase DLM_2319 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2319 SM00091 PAS domain DLM_2319 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_2319 SM00267 diguanylate cyclase DLM_2324 SM00530 Helix-turn-helix XRE-family like proteins DLM_2331 SM00912 haemagglutination activity domain DLM_2346 SM00382 ATPases associated with a variety of cellular activities DLM_2346 SM00448 cheY-homologous receiver domain DLM_2350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2355 SM00091 PAS domain DLM_2355 SM00387 Histidine kinase-like ATPases DLM_2355 SM00388 His Kinase A (phosphoacceptor) domain DLM_2356 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_2358 SM00342 helix_turn_helix, arabinose operon control protein DLM_2364 SM00631 DLM_2364 DLM_2366 SM00528 Domain in histone-like proteins of HNS family DLM_2372 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2372 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2380 SM00091 PAS domain DLM_2380 SM00387 Histidine kinase-like ATPases DLM_2380 SM00388 His Kinase A (phosphoacceptor) domain DLM_2380 SM00448 cheY-homologous receiver domain DLM_2381 SM00897 FIST N domain DLM_2381 SM01204 DLM_2381 DLM_2383 SM00421 helix_turn_helix, Lux Regulon DLM_2383 SM00448 cheY-homologous receiver domain DLM_2384 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2384 SM00091 PAS domain DLM_2384 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2390 SM01101 DLM_2390 DLM_2395 SM00490 helicase superfamily c-terminal domain DLM_2396 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2398 SM00422 helix_turn_helix, mercury resistance DLM_2399 SM00411 bacterial (prokaryotic) histone like domain DLM_2400 SM00873 B3/4 domain DLM_2400 SM00874 tRNA synthetase B5 domain DLM_2400 SM00896 Ferredoxin-fold anticodon binding domain DLM_2405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DLM_2409 SM01323 DLM_2409 DLM_2413 SM00853 MutL C terminal dimerisation domain DLM_2413 SM01340 DLM_2413 DLM_2427 SM00421 helix_turn_helix, Lux Regulon DLM_2432 SM00382 ATPases associated with a variety of cellular activities DLM_2433 SM00052 Putative diguanylate phosphodiesterase DLM_2433 SM00267 diguanylate cyclase DLM_2439 SM00047 Lysozyme subfamily 2 DLM_2451 SM00382 ATPases associated with a variety of cellular activities DLM_2461 SM00859 Semialdehyde dehydrogenase, NAD binding domain DLM_2462 SM00859 Semialdehyde dehydrogenase, NAD binding domain DLM_2463 SM01329 DLM_2463 DLM_2469 SM00530 Helix-turn-helix XRE-family like proteins DLM_2471 SM00363 S4 RNA-binding domain DLM_2480 SM00363 S4 RNA-binding domain DLM_2496 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_2498 SM00052 Putative diguanylate phosphodiesterase DLM_2498 SM00448 cheY-homologous receiver domain DLM_2503 SM00344 helix_turn_helix ASNC type DLM_2507 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_2509 SM00100 Cyclic nucleotide-monophosphate binding domain DLM_2509 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_2510 SM00479 DLM_2510 DLM_2516 SM00267 diguanylate cyclase DLM_2524 SM00267 diguanylate cyclase DLM_2524 SM00448 cheY-homologous receiver domain DLM_2526 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2530 SM00530 Helix-turn-helix XRE-family like proteins DLM_2536 SM00342 helix_turn_helix, arabinose operon control protein DLM_2540 SM00861 Transketolase, pyrimidine binding domain DLM_2544 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2547 SM00422 helix_turn_helix, mercury resistance DLM_2556 SM00852 Probable molybdopterin binding domain DLM_2558 SM00382 ATPases associated with a variety of cellular activities DLM_2567 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_2567 SM00322 K homology RNA-binding domain DLM_2568 SM01387 DLM_2568 DLM_2572 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_2572 SM00322 K homology RNA-binding domain DLM_2580 SM00244 prohibitin homologues DLM_2585 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_2586 SM00493 DLM_2586 DLM_2589 SM00382 ATPases associated with a variety of cellular activities DLM_2592 SM00382 ATPases associated with a variety of cellular activities DLM_2595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DLM_2597 SM00849 Metallo-beta-lactamase superfamily DLM_2602 SM00960 Roadblock/LC7 domain DLM_2605 SM00460 Transglutaminase/protease-like homologues DLM_2617 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_2617 SM00895 DLM_2617 DLM_2621 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2621 SM00091 PAS domain DLM_2621 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2623 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2623 SM00091 PAS domain DLM_2623 SM00387 Histidine kinase-like ATPases DLM_2623 SM00388 His Kinase A (phosphoacceptor) domain DLM_2624 SM00421 helix_turn_helix, Lux Regulon DLM_2624 SM00448 cheY-homologous receiver domain DLM_2650 SM01005 Alanine racemase, C-terminal domain DLM_2652 SM00344 helix_turn_helix ASNC type DLM_2653 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2655 SM00382 ATPases associated with a variety of cellular activities DLM_2710 SM00387 Histidine kinase-like ATPases DLM_2710 SM00388 His Kinase A (phosphoacceptor) domain DLM_2711 SM00448 cheY-homologous receiver domain DLM_2712 SM00091 PAS domain DLM_2712 SM00387 Histidine kinase-like ATPases DLM_2712 SM00388 His Kinase A (phosphoacceptor) domain DLM_2712 SM00448 cheY-homologous receiver domain DLM_2713 SM00448 cheY-homologous receiver domain DLM_2713 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_2714 SM00267 diguanylate cyclase DLM_2714 SM00448 cheY-homologous receiver domain DLM_2716 SM00344 helix_turn_helix ASNC type DLM_2719 SM00155 Phospholipase D. Active site motifs. DLM_2721 SM00478 endonuclease III DLM_2722 SM00267 diguanylate cyclase DLM_2727 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DLM_2732 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2732 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2736 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DLM_2736 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2736 SM00387 Histidine kinase-like ATPases DLM_2737 SM00421 helix_turn_helix, Lux Regulon DLM_2737 SM00448 cheY-homologous receiver domain DLM_2738 SM00091 PAS domain DLM_2738 SM00267 diguanylate cyclase DLM_2739 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_2742 SM00382 ATPases associated with a variety of cellular activities DLM_2745 SM01006 Siderophore biosynthesis protein domain DLM_2749 SM00100 Cyclic nucleotide-monophosphate binding domain DLM_2749 SM00419 helix_turn_helix, cAMP Regulatory protein DLM_2751 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_2760 SM00327 von Willebrand factor (vWF) type A domain DLM_2772 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_2773 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_2777 SM00028 Tetratricopeptide repeats DLM_2782 SM00052 Putative diguanylate phosphodiesterase DLM_2782 SM00448 cheY-homologous receiver domain DLM_2783 SM00421 helix_turn_helix, Lux Regulon DLM_2783 SM00448 cheY-homologous receiver domain DLM_2785 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DLM_2786 SM00382 ATPases associated with a variety of cellular activities DLM_2790 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_2790 SM00895 DLM_2790 DLM_2795 SM00841 Elongation factor P, C-terminal DLM_2795 SM01185 DLM_2795 DLM_2804 SM00984 UDP binding domain DLM_2805 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DLM_2808 SM00411 bacterial (prokaryotic) histone like domain DLM_2809 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_2816 SM00354 helix_turn _helix lactose operon repressor DLM_2822 SM01217 DLM_2822 DLM_2824 SM00822 DLM_2824 DLM_2826 SM00530 Helix-turn-helix XRE-family like proteins DLM_2852 SM00052 Putative diguanylate phosphodiesterase DLM_2855 SM00825 Beta-ketoacyl synthase DLM_2856 SM00823 Phosphopantetheine attachment site DLM_2857 SM00822 DLM_2857 DLM_2858 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DLM_2869 SM01034 Sensors of blue-light using FAD DLM_2874 SM00052 Putative diguanylate phosphodiesterase DLM_2874 SM00267 diguanylate cyclase DLM_2886 SM00448 cheY-homologous receiver domain DLM_2887 SM00138 Methyltransferase, chemotaxis proteins DLM_2888 SM00091 PAS domain DLM_2888 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2889 SM00260 Two component signalling adaptor domain DLM_2890 SM00073 Histidine Phosphotransfer domain DLM_2890 SM00260 Two component signalling adaptor domain DLM_2890 SM00387 Histidine kinase-like ATPases DLM_2890 SM01231 DLM_2890 DLM_2891 SM00448 cheY-homologous receiver domain DLM_2892 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_2894 SM00387 Histidine kinase-like ATPases DLM_2894 SM00388 His Kinase A (phosphoacceptor) domain DLM_2895 SM00260 Two component signalling adaptor domain DLM_2895 SM00448 cheY-homologous receiver domain DLM_2896 SM00260 Two component signalling adaptor domain DLM_2896 SM00448 cheY-homologous receiver domain DLM_2897 SM00448 cheY-homologous receiver domain DLM_2899 SM00073 Histidine Phosphotransfer domain DLM_2899 SM00260 Two component signalling adaptor domain DLM_2899 SM00387 Histidine kinase-like ATPases DLM_2899 SM01231 DLM_2899 DLM_2900 SM00052 Putative diguanylate phosphodiesterase DLM_2903 SM00986 Uracil DNA glycosylase superfamily DLM_2903 SM00987 UreE urease accessory protein, C-terminal domain DLM_2909 SM01192 DLM_2909 DLM_2909 SM01193 DLM_2909 DLM_2911 SM00267 diguanylate cyclase DLM_2926 SM00331 Sigma factor PP2C-like phosphatases DLM_2926 SM00448 cheY-homologous receiver domain DLM_2928 SM00849 Metallo-beta-lactamase superfamily DLM_2929 SM00267 diguanylate cyclase DLM_2931 SM00342 helix_turn_helix, arabinose operon control protein DLM_2934 SM00073 Histidine Phosphotransfer domain DLM_2935 SM00267 diguanylate cyclase DLM_2935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2939 SM00052 Putative diguanylate phosphodiesterase DLM_2939 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2939 SM00091 PAS domain DLM_2939 SM00267 diguanylate cyclase DLM_2939 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_2940 SM00052 Putative diguanylate phosphodiesterase DLM_2940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2940 SM00091 PAS domain DLM_2940 SM00267 diguanylate cyclase DLM_2945 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_2945 SM00091 PAS domain DLM_2945 SM00267 diguanylate cyclase DLM_2946 SM00052 Putative diguanylate phosphodiesterase DLM_2953 SM00382 ATPases associated with a variety of cellular activities DLM_2962 SM00382 ATPases associated with a variety of cellular activities DLM_2967 SM00448 cheY-homologous receiver domain DLM_2967 SM00862 Transcriptional regulatory protein, C terminal DLM_2968 SM00387 Histidine kinase-like ATPases DLM_2968 SM00388 His Kinase A (phosphoacceptor) domain DLM_2985 SM00046 Diacylglycerol kinase catalytic domain (presumed) DLM_3004 SM00563 Phosphate acyltransferases DLM_3012 SM00829 Enoylreductase DLM_3018 SM01329 DLM_3018 DLM_3021 SM01004 Delta-aminolevulinic acid dehydratase DLM_3024 SM00271 DnaJ molecular chaperone homology domain DLM_3035 SM00382 ATPases associated with a variety of cellular activities DLM_3050 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_3050 SM00895 DLM_3050 DLM_3057 SM00346 helix_turn_helix isocitrate lyase regulation DLM_3061 SM00904 Riboflavin kinase DLM_3067 SM00822 DLM_3067 DLM_3068 SM00382 ATPases associated with a variety of cellular activities DLM_3069 SM01130 DLM_3069 DLM_3072 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. DLM_3076 SM00924 MgtE intracellular N domain DLM_3079 SM00450 Rhodanese Homology Domain DLM_3080 SM01230 DLM_3080 DLM_3081 SM01034 Sensors of blue-light using FAD DLM_3083 SM00387 Histidine kinase-like ATPases DLM_3083 SM00388 His Kinase A (phosphoacceptor) domain DLM_3084 SM00382 ATPases associated with a variety of cellular activities DLM_3084 SM00448 cheY-homologous receiver domain DLM_3087 SM00855 Phosphoglycerate mutase family DLM_3098 SM00382 ATPases associated with a variety of cellular activities DLM_3106 SM00052 Putative diguanylate phosphodiesterase DLM_3114 SM01061 CAT RNA binding domain DLM_3118 SM00855 Phosphoglycerate mutase family DLM_3131 SM00967 RNA 2'-O ribose methyltransferase substrate binding DLM_3132 SM00052 Putative diguanylate phosphodiesterase DLM_3132 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_3132 SM00091 PAS domain DLM_3132 SM00267 diguanylate cyclase DLM_3133 SM00487 DEAD-like helicases superfamily DLM_3133 SM00490 helicase superfamily c-terminal domain DLM_3133 SM00982 DLM_3133 DLM_3133 SM01058 CarD-like/TRCF domain DLM_3153 SM00947 Carbonic anhydrase DLM_3162 SM00830 Chorismate mutase type II DLM_3165 SM00849 Metallo-beta-lactamase superfamily DLM_3173 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_3173 SM00895 DLM_3173 DLM_3177 SM00382 ATPases associated with a variety of cellular activities DLM_3179 SM00267 diguanylate cyclase DLM_3180 SM00267 diguanylate cyclase DLM_3184 SM00834 Putative regulatory protein DLM_3195 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DLM_3196 SM00387 Histidine kinase-like ATPases DLM_3196 SM00433 TopoisomeraseII DLM_3198 SM01230 DLM_3198 DLM_3200 SM00155 Phospholipase D. Active site motifs. DLM_3212 SM00382 ATPases associated with a variety of cellular activities DLM_3213 SM00382 ATPases associated with a variety of cellular activities DLM_3223 SM00271 DnaJ molecular chaperone homology domain DLM_3230 SM01119 DLM_3230 DLM_3239 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DLM_3239 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DLM_3240 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DLM_3247 SM00342 helix_turn_helix, arabinose operon control protein DLM_3249 SM00382 ATPases associated with a variety of cellular activities DLM_3255 SM00893 Electron transfer flavoprotein domain DLM_3258 SM00989 DLM_3258 DLM_3271 SM00966 SpoVT / AbrB like domain DLM_3277 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3280 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_3281 SM00100 Cyclic nucleotide-monophosphate binding domain DLM_3281 SM00419 helix_turn_helix, cAMP Regulatory protein DLM_3286 SM00849 Metallo-beta-lactamase superfamily DLM_3287 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_3288 SM00062 Bacterial periplasmic substrate-binding proteins DLM_3294 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DLM_3294 SM00534 ATPase domain of DNA mismatch repair MUTS family DLM_3300 SM01329 DLM_3300 DLM_3303 SM00357 Cold shock protein domain DLM_3305 SM00382 ATPases associated with a variety of cellular activities DLM_3305 SM01086 C-terminal, D2-small domain, of ClpB protein DLM_3311 SM00881 CoA binding domain DLM_3315 SM00257 Lysin motif DLM_3317 SM00460 Transglutaminase/protease-like homologues DLM_3321 SM01207 DLM_3321 DLM_3322 SM00905 Dihydroneopterin aldolase DLM_3327 SM00138 Methyltransferase, chemotaxis proteins DLM_3329 SM00859 Semialdehyde dehydrogenase, NAD binding domain DLM_3330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3335 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DLM_3336 SM01133 DLM_3336 DLM_3338 SM00954 Region found in RelA / SpoT proteins DLM_3339 SM00478 endonuclease III DLM_3340 SM00981 DLM_3340 DLM_3359 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DLM_3359 SM00267 diguanylate cyclase DLM_3359 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3361 SM00996 S-adenosyl-L-homocysteine hydrolase DLM_3361 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DLM_3362 SM00091 PAS domain DLM_3362 SM00267 diguanylate cyclase DLM_3370 SM00883 Chaperonin 10 Kd subunit DLM_3379 SM00858 DLM_3379 DLM_3384 SM00984 UDP binding domain DLM_3388 SM00155 Phospholipase D. Active site motifs. DLM_3392 SM00342 helix_turn_helix, arabinose operon control protein DLM_3397 SM00062 Bacterial periplasmic substrate-binding proteins DLM_3397 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DLM_3401 SM00382 ATPases associated with a variety of cellular activities DLM_3402 SM00487 DEAD-like helicases superfamily DLM_3410 SM01400 DLM_3410 DLM_3414 SM00028 Tetratricopeptide repeats DLM_3415 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DLM_3415 SM01232 DLM_3415 DLM_3422 SM00062 Bacterial periplasmic substrate-binding proteins DLM_3422 SM00387 Histidine kinase-like ATPases DLM_3422 SM00388 His Kinase A (phosphoacceptor) domain DLM_3422 SM00448 cheY-homologous receiver domain DLM_3425 SM00382 ATPases associated with a variety of cellular activities DLM_3435 SM00421 helix_turn_helix, Lux Regulon DLM_3442 SM00028 Tetratricopeptide repeats DLM_3443 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3443 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3446 SM00448 cheY-homologous receiver domain DLM_3449 SM00387 Histidine kinase-like ATPases DLM_3449 SM00388 His Kinase A (phosphoacceptor) domain DLM_3450 SM00448 cheY-homologous receiver domain DLM_3450 SM00862 Transcriptional regulatory protein, C terminal DLM_3455 SM01329 DLM_3455 DLM_3470 SM00420 helix_turn_helix, Deoxyribose operon repressor DLM_3470 SM01134 DLM_3470 DLM_3477 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3477 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3483 SM00849 Metallo-beta-lactamase superfamily DLM_3496 SM00382 ATPases associated with a variety of cellular activities DLM_3499 SM00062 Bacterial periplasmic substrate-binding proteins DLM_3510 SM00530 Helix-turn-helix XRE-family like proteins DLM_3514 SM00990 DLM_3514 DLM_3529 SM00842 Cell division protein FtsA DLM_3533 SM00965 Secretin and TonB N terminus short domain DLM_3537 SM00382 ATPases associated with a variety of cellular activities DLM_3547 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DLM_3547 SM00091 PAS domain DLM_3547 SM00267 diguanylate cyclase DLM_3552 SM00342 helix_turn_helix, arabinose operon control protein DLM_3559 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_3577 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_3585 SM00382 ATPases associated with a variety of cellular activities DLM_3590 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DLM_3592 SM00829 Enoylreductase DLM_3594 SM00382 ATPases associated with a variety of cellular activities DLM_3604 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DLM_3604 SM00474 3'-5' exonuclease DLM_3604 SM00475 5'-3' exonuclease DLM_3604 SM00482 DNA polymerase A domain DLM_3612 SM00448 cheY-homologous receiver domain DLM_3612 SM00862 Transcriptional regulatory protein, C terminal DLM_3613 SM00387 Histidine kinase-like ATPases DLM_3613 SM00388 His Kinase A (phosphoacceptor) domain DLM_3617 SM00267 diguanylate cyclase DLM_3620 SM00052 Putative diguanylate phosphodiesterase DLM_3620 SM00091 PAS domain DLM_3620 SM00267 diguanylate cyclase DLM_3622 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_3623 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_3623 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3627 SM00421 helix_turn_helix, Lux Regulon DLM_3627 SM00448 cheY-homologous receiver domain DLM_3628 SM00091 PAS domain DLM_3628 SM00387 Histidine kinase-like ATPases DLM_3628 SM00388 His Kinase A (phosphoacceptor) domain DLM_3636 SM00671 Sel1-like repeats. DLM_3637 SM00671 Sel1-like repeats. DLM_3638 SM00671 Sel1-like repeats. DLM_3653 SM00965 Secretin and TonB N terminus short domain DLM_3657 SM00420 helix_turn_helix, Deoxyribose operon repressor DLM_3657 SM01134 DLM_3657 DLM_3660 SM00382 ATPases associated with a variety of cellular activities DLM_3668 SM00470 ParB-like nuclease domain DLM_3671 SM01228 DLM_3671 DLM_3674 SM00978 DLM_3674 DLM_3675 SM00052 Putative diguanylate phosphodiesterase DLM_3676 SM00749 bacterial OsmY and nodulation domain DLM_3684 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DLM_3685 SM00220 Serine/Threonine protein kinases, catalytic domain DLM_3686 SM00220 Serine/Threonine protein kinases, catalytic domain DLM_3689 SM00052 Putative diguanylate phosphodiesterase DLM_3689 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_3689 SM00091 PAS domain DLM_3689 SM00267 diguanylate cyclase DLM_3689 SM01079 DLM_3689 DLM_3691 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3691 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3694 SM00052 Putative diguanylate phosphodiesterase DLM_3694 SM00267 diguanylate cyclase DLM_3696 SM00421 helix_turn_helix, Lux Regulon DLM_3698 SM00382 ATPases associated with a variety of cellular activities DLM_3729 SM00917 LeuA allosteric (dimerisation) domain DLM_3738 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_3743 SM00644 DLM_3743 DLM_3746 SM00886 Stress responsive A/B Barrel Domain DLM_3747 SM00091 PAS domain DLM_3747 SM00387 Histidine kinase-like ATPases DLM_3747 SM00388 His Kinase A (phosphoacceptor) domain DLM_3748 SM00448 cheY-homologous receiver domain DLM_3748 SM00862 Transcriptional regulatory protein, C terminal DLM_3749 SM00344 helix_turn_helix ASNC type DLM_3750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DLM_3754 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_3754 SM00866 DLM_3754 DLM_3758 SM00062 Bacterial periplasmic substrate-binding proteins DLM_3760 SM01209 DLM_3760 DLM_3760 SM01210 DLM_3760 DLM_3762 SM00798 AICARFT/IMPCHase bienzyme DLM_3762 SM00851 MGS-like domain DLM_3765 SM00052 Putative diguanylate phosphodiesterase DLM_3765 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_3765 SM00091 PAS domain DLM_3765 SM00267 diguanylate cyclase DLM_3765 SM01049 DLM_3765 DLM_3778 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DLM_3779 SM00849 Metallo-beta-lactamase superfamily DLM_3782 SM00947 Carbonic anhydrase DLM_3806 SM00855 Phosphoglycerate mutase family DLM_3828 SM00382 ATPases associated with a variety of cellular activities DLM_3828 SM01086 C-terminal, D2-small domain, of ClpB protein DLM_3834 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DLM_3836 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3838 SM00450 Rhodanese Homology Domain DLM_3841 SM00267 diguanylate cyclase DLM_3842 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DLM_3842 SM00091 PAS domain DLM_3842 SM00267 diguanylate cyclase DLM_3845 SM00487 DEAD-like helicases superfamily DLM_3845 SM00490 helicase superfamily c-terminal domain DLM_3847 SM01322 DLM_3847 DLM_3851 SM00344 helix_turn_helix ASNC type DLM_3856 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_3858 SM00382 ATPases associated with a variety of cellular activities DLM_3860 SM00267 diguanylate cyclase DLM_3861 SM01018 B12 binding domain DLM_3862 SM00062 Bacterial periplasmic substrate-binding proteins DLM_3864 SM00387 Histidine kinase-like ATPases DLM_3864 SM00388 His Kinase A (phosphoacceptor) domain DLM_3864 SM00448 cheY-homologous receiver domain DLM_3866 SM00829 Enoylreductase DLM_3871 SM00448 cheY-homologous receiver domain DLM_3871 SM00862 Transcriptional regulatory protein, C terminal DLM_3872 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3872 SM00387 Histidine kinase-like ATPases DLM_3872 SM00388 His Kinase A (phosphoacceptor) domain DLM_3882 SM00382 ATPases associated with a variety of cellular activities DLM_3884 SM00342 helix_turn_helix, arabinose operon control protein DLM_3889 SM00344 helix_turn_helix ASNC type DLM_3890 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_3891 SM01011 Aminopeptidase P, N-terminal domain DLM_3896 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_3899 SM00420 helix_turn_helix, Deoxyribose operon repressor DLM_3899 SM01134 DLM_3899 DLM_3903 SM00342 helix_turn_helix, arabinose operon control protein DLM_3921 SM00530 Helix-turn-helix XRE-family like proteins DLM_3923 SM00986 Uracil DNA glycosylase superfamily DLM_3923 SM00987 UreE urease accessory protein, C-terminal domain DLM_3931 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_3931 SM00866 DLM_3931 DLM_3939 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DLM_3940 SM00028 Tetratricopeptide repeats DLM_3952 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_3952 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_3954 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_3972 SM00450 Rhodanese Homology Domain DLM_3973 SM00986 Uracil DNA glycosylase superfamily DLM_3973 SM00987 UreE urease accessory protein, C-terminal domain DLM_3974 SM01091 Transporter associated domain DLM_3985 SM00382 ATPases associated with a variety of cellular activities DLM_3989 SM00849 Metallo-beta-lactamase superfamily DLM_3996 SM01118 DLM_3996 DLM_4002 SM00487 DEAD-like helicases superfamily DLM_4002 SM00490 helicase superfamily c-terminal domain DLM_4012 SM01219 DLM_4012 DLM_4014 SM00650 Ribosomal RNA adenine dimethylases DLM_4015 SM00062 Bacterial periplasmic substrate-binding proteins DLM_4018 SM00382 ATPases associated with a variety of cellular activities DLM_4019 SM00052 Putative diguanylate phosphodiesterase DLM_4020 SM00028 Tetratricopeptide repeats DLM_4020 SM00448 cheY-homologous receiver domain DLM_4022 SM00382 ATPases associated with a variety of cellular activities DLM_4037 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DLM_4038 SM00861 Transketolase, pyrimidine binding domain DLM_4041 SM00434 DNA Topoisomerase IV DLM_4042 SM00387 Histidine kinase-like ATPases DLM_4042 SM00388 His Kinase A (phosphoacceptor) domain DLM_4043 SM00382 ATPases associated with a variety of cellular activities DLM_4043 SM00448 cheY-homologous receiver domain DLM_4049 SM00448 cheY-homologous receiver domain DLM_4050 SM00448 cheY-homologous receiver domain DLM_4051 SM00073 Histidine Phosphotransfer domain DLM_4051 SM00091 PAS domain DLM_4051 SM00387 Histidine kinase-like ATPases DLM_4051 SM00388 His Kinase A (phosphoacceptor) domain DLM_4051 SM00448 cheY-homologous receiver domain DLM_4053 SM00937 DLM_4053 DLM_4056 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_4062 SM00829 Enoylreductase DLM_4065 SM00474 3'-5' exonuclease DLM_4066 SM00100 Cyclic nucleotide-monophosphate binding domain DLM_4066 SM00419 helix_turn_helix, cAMP Regulatory protein DLM_4069 SM00382 ATPases associated with a variety of cellular activities DLM_4072 SM00342 helix_turn_helix, arabinose operon control protein DLM_4075 SM00267 diguanylate cyclase DLM_4078 SM01007 Class II Aldolase and Adducin N-terminal domain DLM_4081 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_4081 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_4085 SM00869 Autotransporter beta-domain DLM_4088 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_4088 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_4101 SM00387 Histidine kinase-like ATPases DLM_4101 SM00433 TopoisomeraseII DLM_4102 SM00480 DNA polymerase III beta subunit DLM_4103 SM00382 ATPases associated with a variety of cellular activities DLM_4103 SM00760 Bacterial dnaA protein helix-turn-helix domain DLM_4106 SM01234 DLM_4106 DLM_4116 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DLM_4116 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DLM_4131 SM00052 Putative diguanylate phosphodiesterase DLM_4133 SM00420 helix_turn_helix, Deoxyribose operon repressor DLM_4133 SM01134 DLM_4133 DLM_4134 SM00267 diguanylate cyclase DLM_4134 SM00448 cheY-homologous receiver domain DLM_4135 SM00955 DLM_4135 DLM_4138 SM00382 ATPases associated with a variety of cellular activities DLM_4142 SM00387 Histidine kinase-like ATPases DLM_4142 SM00388 His Kinase A (phosphoacceptor) domain DLM_4143 SM00448 cheY-homologous receiver domain DLM_4143 SM00862 Transcriptional regulatory protein, C terminal DLM_4153 SM00849 Metallo-beta-lactamase superfamily DLM_4156 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_4156 SM01091 Transporter associated domain DLM_4164 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_4164 SM00876 Biotin and Thiamin Synthesis associated domain DLM_4166 SM00052 Putative diguanylate phosphodiesterase DLM_4166 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DLM_4166 SM00267 diguanylate cyclase DLM_4174 SM00342 helix_turn_helix, arabinose operon control protein DLM_4186 SM00845 GatB domain DLM_4200 SM00842 Cell division protein FtsA DLM_4202 SM00864 Tubulin/FtsZ family, GTPase domain DLM_4202 SM00865 Tubulin/FtsZ family, C-terminal domain DLM_4228 SM00363 S4 RNA-binding domain DLM_4232 SM01230 DLM_4232 DLM_4234 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_4234 SM01049 DLM_4234 DLM_4241 SM00331 Sigma factor PP2C-like phosphatases DLM_4243 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_4249 SM00382 ATPases associated with a variety of cellular activities DLM_4252 SM00382 ATPases associated with a variety of cellular activities DLM_4255 SM00957 SecA DEAD-like domain DLM_4255 SM00958 SecA preprotein cross-linking domain DLM_4257 SM00316 Ribosomal protein S1-like RNA-binding domain DLM_4258 SM00971 Serine acetyltransferase, N-terminal DLM_4264 SM00062 Bacterial periplasmic substrate-binding proteins DLM_4267 SM00448 cheY-homologous receiver domain DLM_4268 SM00448 cheY-homologous receiver domain DLM_4268 SM00850 LytTr DNA-binding domain DLM_4269 SM00267 diguanylate cyclase DLM_4269 SM01079 DLM_4269 DLM_4277 SM00028 Tetratricopeptide repeats DLM_4279 SM01001 AIR carboxylase DLM_4286 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DLM_4286 SM00450 Rhodanese Homology Domain DLM_4306 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DLM_4306 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DLM_4306 SM00493 DLM_4306 DLM_4309 SM00257 Lysin motif DLM_4316 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_4316 SM00387 Histidine kinase-like ATPases DLM_4316 SM00388 His Kinase A (phosphoacceptor) domain DLM_4317 SM00448 cheY-homologous receiver domain DLM_4324 SM01152 DLM_4324 DLM_4339 SM00450 Rhodanese Homology Domain DLM_4341 SM01091 Transporter associated domain DLM_4353 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DLM_4355 SM00382 ATPases associated with a variety of cellular activities DLM_4359 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DLM_4366 SM00382 ATPases associated with a variety of cellular activities DLM_4367 SM00382 ATPases associated with a variety of cellular activities DLM_4367 SM00962 SRP54-type protein, GTPase domain DLM_4367 SM00963 SRP54-type protein, helical bundle domain DLM_4378 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DLM_4378 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DLM_4379 SM00649 Ribosomal protein L11/L12 DLM_4385 SM00663 RNA polymerase I subunit A N-terminus DLM_4388 SM00838 Elongation factor G C-terminus DLM_4388 SM00889 Elongation factor G, domain IV DLM_4390 SM01403 DLM_4390 DLM_4394 SM01382 DLM_4394 DLM_4394 SM01383 DLM_4394 DLM_4397 SM00322 K homology RNA-binding domain DLM_4402 SM01374 DLM_4402 DLM_4403 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DLM_4415 SM00363 S4 RNA-binding domain DLM_4415 SM01390 DLM_4415 DLM_4417 SM00662 RNA polymerases D DLM_4420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_4420 SM01049 DLM_4420 DLM_4422 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_4422 SM01091 Transporter associated domain DLM_4427 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_4431 SM00382 ATPases associated with a variety of cellular activities DLM_4434 SM00354 helix_turn _helix lactose operon repressor DLM_4435 SM00052 Putative diguanylate phosphodiesterase DLM_4435 SM00267 diguanylate cyclase DLM_4435 SM01079 DLM_4435 DLM_4437 SM00363 S4 RNA-binding domain DLM_4438 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DLM_4445 SM00984 UDP binding domain DLM_4461 SM00267 diguanylate cyclase DLM_4463 SM00855 Phosphoglycerate mutase family DLM_4478 SM00382 ATPases associated with a variety of cellular activities DLM_4482 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). DLM_4482 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DLM_4489 SM00382 ATPases associated with a variety of cellular activities DLM_4498 SM00849 Metallo-beta-lactamase superfamily DLM_4499 SM00448 cheY-homologous receiver domain DLM_4500 SM00091 PAS domain DLM_4500 SM00387 Histidine kinase-like ATPases DLM_4500 SM00388 His Kinase A (phosphoacceptor) domain DLM_4503 SM00341 Helicase and RNase D C-terminal DLM_4503 SM00487 DEAD-like helicases superfamily DLM_4503 SM00490 helicase superfamily c-terminal domain DLM_4503 SM00956 DLM_4503 DLM_4512 SM00345 helix_turn_helix gluconate operon transcriptional repressor DLM_4513 SM00450 Rhodanese Homology Domain DLM_4524 SM00116 Domain in cystathionine beta-synthase and other proteins. DLM_4525 SM00346 helix_turn_helix isocitrate lyase regulation DLM_4537 SM00028 Tetratricopeptide repeats DLM_4538 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DLM_4538 SM00292 breast cancer carboxy-terminal domain DLM_4538 SM00532 Ligase N family DLM_4539 SM00771 ZipA, C-terminal domain (FtsZ-binding) DLM_4540 SM00729 Elongator protein 3, MiaB family, Radical SAM DLM_4541 SM00347 helix_turn_helix multiple antibiotic resistance protein DLM_4543 SM00867 YceI-like domain DLM_4544 SM00867 YceI-like domain DLM_4548 SM00732 Likely ribonuclease with RNase H fold.